Query psy10348
Match_columns 291
No_of_seqs 516 out of 1230
Neff 12.0
Searched_HMMs 29240
Date Fri Aug 16 15:39:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 2.8E-44 9.4E-49 279.9 31.1 234 6-291 9-245 (304)
2 4gqb_B Methylosome protein 50; 100.0 1.7E-44 5.7E-49 285.1 29.4 229 6-290 78-315 (344)
3 3k26_A Polycomb protein EED; W 100.0 8E-44 2.7E-48 284.2 31.2 283 9-291 68-352 (366)
4 1vyh_C Platelet-activating fac 100.0 4.5E-43 1.5E-47 284.0 28.7 231 7-291 105-355 (410)
5 3ow8_A WD repeat-containing pr 100.0 2.9E-42 1E-46 270.2 28.8 228 8-291 78-307 (321)
6 3ow8_A WD repeat-containing pr 100.0 3.3E-42 1.1E-46 269.9 27.3 232 8-291 30-265 (321)
7 2ynn_A Coatomer subunit beta'; 100.0 3.8E-41 1.3E-45 262.2 31.2 225 8-287 53-283 (304)
8 1vyh_C Platelet-activating fac 100.0 4.1E-42 1.4E-46 278.3 26.1 228 8-291 148-397 (410)
9 2pbi_B Guanine nucleotide-bind 100.0 5E-41 1.7E-45 266.8 31.2 231 7-291 61-343 (354)
10 3frx_A Guanine nucleotide-bind 100.0 4.4E-41 1.5E-45 263.6 29.3 227 8-291 15-254 (319)
11 4g56_B MGC81050 protein; prote 100.0 2E-41 6.7E-46 269.4 26.4 229 7-291 91-329 (357)
12 1got_B GT-beta; complex (GTP-b 100.0 9.5E-41 3.3E-45 264.0 29.6 229 8-291 53-287 (340)
13 2pm7_B Protein transport prote 100.0 1E-40 3.5E-45 259.0 28.8 243 7-291 6-271 (297)
14 1got_B GT-beta; complex (GTP-b 100.0 2E-40 6.7E-45 262.2 30.4 227 8-291 95-329 (340)
15 4ery_A WD repeat-containing pr 100.0 2.9E-40 9.9E-45 258.3 28.6 258 8-291 21-296 (312)
16 3bg1_A Protein SEC13 homolog; 100.0 1.6E-40 5.6E-45 260.0 24.1 244 5-291 8-279 (316)
17 1nr0_A Actin interacting prote 100.0 1.6E-39 5.4E-44 275.8 30.3 270 8-291 145-508 (611)
18 1erj_A Transcriptional repress 100.0 2.8E-39 9.6E-44 260.4 29.8 242 12-291 125-375 (393)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-39 1.3E-43 255.3 29.0 251 8-291 59-321 (345)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-39 6.7E-44 256.9 27.3 239 8-291 13-269 (345)
21 2xzm_R RACK1; ribosome, transl 100.0 3.7E-39 1.3E-43 255.2 28.3 232 8-290 19-271 (343)
22 4gqb_B Methylosome protein 50; 100.0 9.8E-40 3.4E-44 257.8 24.6 229 7-290 27-274 (344)
23 1erj_A Transcriptional repress 100.0 9.6E-39 3.3E-43 257.3 28.2 240 7-291 61-327 (393)
24 3frx_A Guanine nucleotide-bind 100.0 4.1E-38 1.4E-42 246.7 30.4 227 8-291 63-303 (319)
25 3iz6_a 40S ribosomal protein R 100.0 1.4E-39 4.8E-44 261.1 21.7 239 8-291 64-315 (380)
26 2hes_X YDR267CP; beta-propelle 100.0 2.6E-38 8.8E-43 249.0 28.1 236 8-287 12-263 (330)
27 3dwl_C Actin-related protein 2 100.0 6.3E-40 2.1E-44 263.0 18.2 250 4-291 5-268 (377)
28 2hes_X YDR267CP; beta-propelle 100.0 1.4E-38 4.8E-43 250.5 25.5 239 9-291 57-314 (330)
29 4g56_B MGC81050 protein; prote 100.0 1.6E-38 5.6E-43 252.6 25.0 234 5-290 37-286 (357)
30 1nr0_A Actin interacting prote 100.0 3.3E-38 1.1E-42 267.7 27.2 233 7-291 56-341 (611)
31 2xzm_R RACK1; ribosome, transl 100.0 1.4E-37 4.9E-42 246.1 29.1 232 8-291 74-326 (343)
32 3dm0_A Maltose-binding peripla 100.0 1.3E-37 4.4E-42 268.0 29.4 232 7-291 379-619 (694)
33 3f3f_A Nucleoporin SEH1; struc 100.0 5.1E-37 1.8E-41 243.0 29.9 255 3-291 4-323 (351)
34 3jrp_A Fusion protein of prote 100.0 2.4E-37 8.2E-42 247.9 27.8 242 5-291 6-273 (379)
35 3iz6_a 40S ribosomal protein R 100.0 4.5E-38 1.5E-42 252.3 21.9 234 8-291 106-361 (380)
36 1k8k_C P40, ARP2/3 complex 41 100.0 5.9E-37 2E-41 245.1 28.3 248 6-291 4-261 (372)
37 4e54_B DNA damage-binding prot 100.0 6.7E-38 2.3E-42 255.7 22.7 210 7-260 116-330 (435)
38 3mmy_A MRNA export factor; mRN 100.0 2.3E-37 7.8E-42 246.9 25.3 262 7-291 36-332 (368)
39 1gxr_A ESG1, transducin-like e 100.0 4.1E-36 1.4E-40 236.9 29.5 225 8-291 95-323 (337)
40 2ymu_A WD-40 repeat protein; u 100.0 1.7E-36 5.8E-41 256.0 28.1 223 8-291 342-566 (577)
41 2pbi_B Guanine nucleotide-bind 100.0 2.1E-36 7.3E-41 240.2 26.3 200 8-254 152-354 (354)
42 2ymu_A WD-40 repeat protein; u 100.0 2.9E-36 9.8E-41 254.6 28.6 252 8-291 14-279 (577)
43 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-36 1.2E-40 243.2 27.0 235 8-291 79-330 (402)
44 4aow_A Guanine nucleotide-bind 100.0 1.8E-35 6.1E-40 233.7 30.3 228 8-290 36-272 (340)
45 4aez_A CDC20, WD repeat-contai 100.0 1.2E-35 4.1E-40 240.0 29.8 229 6-291 130-366 (401)
46 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-36 1.4E-40 263.1 29.0 233 5-291 8-245 (814)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-37 4.1E-42 257.6 18.0 236 5-291 128-414 (524)
48 3zwl_B Eukaryotic translation 100.0 1.6E-35 5.5E-40 236.3 29.7 239 7-291 29-276 (369)
49 1gxr_A ESG1, transducin-like e 100.0 1.4E-35 4.9E-40 233.9 29.0 227 6-291 47-282 (337)
50 3vl1_A 26S proteasome regulato 100.0 8.8E-36 3E-40 242.2 27.6 234 8-287 137-398 (420)
51 3ei3_B DNA damage-binding prot 100.0 2.2E-35 7.6E-40 237.1 28.8 209 8-260 71-285 (383)
52 2pm9_A Protein WEB1, protein t 100.0 1.6E-36 5.5E-41 246.2 22.3 242 5-291 62-323 (416)
53 1r5m_A SIR4-interacting protei 100.0 2.6E-35 9E-40 239.4 29.4 254 7-291 42-347 (425)
54 3dm0_A Maltose-binding peripla 100.0 2.1E-35 7.1E-40 254.2 29.7 236 7-291 427-679 (694)
55 1sq9_A Antiviral protein SKI8; 100.0 1.2E-35 4.1E-40 239.7 26.5 234 8-291 14-308 (397)
56 1yfq_A Cell cycle arrest prote 100.0 2.9E-35 9.9E-40 232.7 28.2 234 7-291 8-268 (342)
57 3k26_A Polycomb protein EED; W 100.0 8.2E-36 2.8E-40 237.8 24.8 251 8-291 16-304 (366)
58 2j04_B YDR362CP, TAU91; beta p 100.0 4.6E-36 1.6E-40 248.1 23.4 202 9-257 206-428 (524)
59 2xyi_A Probable histone-bindin 100.0 2.3E-35 7.9E-40 240.4 27.1 244 5-290 123-395 (430)
60 3i2n_A WD repeat-containing pr 100.0 6.8E-36 2.3E-40 237.6 23.4 246 5-290 60-337 (357)
61 4a11_B DNA excision repair pro 100.0 7.6E-35 2.6E-39 235.5 29.0 248 6-291 39-351 (408)
62 4gq1_A NUP37; propeller, trans 100.0 4.3E-36 1.5E-40 241.8 20.4 252 27-291 102-376 (393)
63 3vl1_A 26S proteasome regulato 100.0 2E-35 6.8E-40 240.1 24.4 251 11-291 98-351 (420)
64 3jro_A Fusion protein of prote 100.0 1.1E-35 3.7E-40 257.6 23.7 241 6-291 5-271 (753)
65 1r5m_A SIR4-interacting protei 100.0 1.6E-34 5.5E-39 234.8 28.3 235 9-291 107-411 (425)
66 3v7d_B Cell division control p 100.0 6E-34 2.1E-38 234.3 31.8 245 8-290 119-366 (464)
67 1sq9_A Antiviral protein SKI8; 100.0 2.8E-35 9.4E-40 237.5 23.1 234 8-286 60-366 (397)
68 3i2n_A WD repeat-containing pr 100.0 5.4E-35 1.9E-39 232.4 24.5 240 7-290 15-276 (357)
69 3dw8_B Serine/threonine-protei 100.0 2.9E-35 9.8E-40 241.0 23.3 239 7-291 25-359 (447)
70 4ggc_A P55CDC, cell division c 100.0 5.3E-34 1.8E-38 223.2 29.0 227 13-291 28-301 (318)
71 2pm9_A Protein WEB1, protein t 100.0 2.9E-35 1E-39 238.8 22.2 236 8-291 111-400 (416)
72 4gga_A P55CDC, cell division c 100.0 1.5E-33 5.1E-38 229.1 32.2 229 8-291 145-381 (420)
73 3dw8_B Serine/threonine-protei 100.0 6.5E-35 2.2E-39 238.9 23.7 248 11-291 94-433 (447)
74 3sfz_A APAF-1, apoptotic pepti 100.0 2.4E-34 8.3E-39 262.1 29.7 240 8-291 613-899 (1249)
75 3gre_A Serine/threonine-protei 100.0 1.9E-34 6.6E-39 235.5 24.9 235 8-291 61-345 (437)
76 4ery_A WD repeat-containing pr 100.0 3.1E-34 1E-38 224.2 24.7 227 8-256 63-311 (312)
77 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-33 6E-38 219.7 28.3 219 7-289 15-240 (313)
78 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.3E-34 2.8E-38 232.6 27.7 244 8-289 100-369 (450)
79 1k8k_C P40, ARP2/3 complex 41 100.0 8.6E-34 2.9E-38 226.8 26.7 218 8-257 50-274 (372)
80 4h5i_A Guanine nucleotide-exch 100.0 1.3E-33 4.6E-38 224.9 27.2 187 58-291 135-329 (365)
81 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-34 6.6E-39 233.1 22.7 227 14-290 38-283 (402)
82 2pm7_B Protein transport prote 100.0 6.4E-34 2.2E-38 220.7 24.7 207 8-257 51-285 (297)
83 1p22_A F-BOX/WD-repeat protein 100.0 8.4E-34 2.9E-38 231.6 25.7 227 8-291 171-400 (435)
84 3zwl_B Eukaryotic translation 100.0 3E-33 1E-37 223.2 28.3 229 8-291 72-332 (369)
85 3gre_A Serine/threonine-protei 100.0 1.1E-33 3.8E-38 231.0 26.4 250 4-291 105-426 (437)
86 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-33 6.2E-38 246.4 29.4 226 8-288 53-284 (814)
87 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-33 1E-37 229.0 28.3 251 8-291 157-424 (445)
88 1p22_A F-BOX/WD-repeat protein 100.0 6.4E-33 2.2E-37 226.4 30.1 220 9-291 132-351 (435)
89 3v7d_B Cell division control p 100.0 3E-33 1E-37 230.2 28.2 226 8-291 160-408 (464)
90 2oaj_A Protein SNI1; WD40 repe 100.0 2.7E-33 9.2E-38 246.0 29.0 212 5-260 12-245 (902)
91 4e54_B DNA damage-binding prot 100.0 5.7E-34 1.9E-38 232.5 22.3 234 8-291 162-417 (435)
92 4h5i_A Guanine nucleotide-exch 100.0 2.2E-33 7.4E-38 223.7 24.0 203 10-258 133-344 (365)
93 3bg1_A Protein SEC13 homolog; 100.0 8.5E-34 2.9E-38 221.9 21.1 212 8-258 55-294 (316)
94 1pgu_A Actin interacting prote 100.0 2E-32 6.9E-37 232.6 29.6 261 8-291 158-600 (615)
95 4aez_A CDC20, WD repeat-contai 100.0 6.1E-33 2.1E-37 224.2 25.0 211 28-291 105-320 (401)
96 3odt_A Protein DOA1; ubiquitin 100.0 3E-32 1E-36 212.7 27.9 223 6-290 55-282 (313)
97 2j04_A TAU60, YPL007P, hypothe 100.0 2E-33 6.8E-38 228.2 21.5 236 5-291 80-347 (588)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-32 4.1E-37 225.7 26.3 233 9-291 3-324 (450)
99 4aow_A Guanine nucleotide-bind 100.0 1.2E-31 4.1E-36 211.8 30.9 233 8-291 84-323 (340)
100 3dwl_C Actin-related protein 2 100.0 9.6E-34 3.3E-38 227.1 18.5 219 8-256 53-280 (377)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.7E-32 3.3E-36 220.1 30.3 248 5-290 114-376 (445)
102 1yfq_A Cell cycle arrest prote 100.0 2.1E-32 7.3E-37 216.3 25.4 232 5-291 51-309 (342)
103 3lrv_A PRE-mRNA-splicing facto 100.0 4.5E-33 1.5E-37 220.4 20.9 213 27-291 49-277 (343)
104 2oaj_A Protein SNI1; WD40 repe 100.0 6.2E-33 2.1E-37 243.7 23.7 127 6-137 94-246 (902)
105 2w18_A PALB2, fancn, partner a 100.0 1E-32 3.4E-37 211.2 21.2 210 10-255 111-355 (356)
106 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-32 4E-37 223.7 22.2 225 10-291 15-284 (588)
107 1pgu_A Actin interacting prote 100.0 3.8E-32 1.3E-36 230.9 25.9 227 7-291 15-269 (615)
108 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-32 4.1E-37 251.0 22.1 233 7-291 958-1195(1249)
109 3jrp_A Fusion protein of prote 100.0 1.3E-31 4.5E-36 214.5 24.2 211 8-257 53-287 (379)
110 4a11_B DNA excision repair pro 100.0 1.5E-30 5.2E-35 210.3 30.3 232 9-262 98-370 (408)
111 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-31 6.1E-36 211.1 23.4 220 8-260 55-340 (351)
112 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-31 6.7E-36 211.0 23.0 192 29-260 88-295 (343)
113 3vu4_A KMHSV2; beta-propeller 100.0 7.7E-31 2.6E-35 208.3 26.2 256 7-291 16-322 (355)
114 4gga_A P55CDC, cell division c 100.0 1.9E-30 6.4E-35 210.9 28.2 224 13-291 108-337 (420)
115 3ei3_B DNA damage-binding prot 100.0 4.4E-31 1.5E-35 212.1 23.4 210 10-257 163-382 (383)
116 2xyi_A Probable histone-bindin 100.0 1.1E-30 3.7E-35 212.8 23.5 215 8-258 179-411 (430)
117 4ggc_A P55CDC, cell division c 100.0 3.2E-30 1.1E-34 201.7 24.5 204 8-259 65-317 (318)
118 3jro_A Fusion protein of prote 100.0 4.5E-31 1.5E-35 228.8 20.6 211 8-257 51-285 (753)
119 4gq1_A NUP37; propeller, trans 100.0 6E-30 2.1E-34 206.0 21.2 226 8-257 134-389 (393)
120 2w18_A PALB2, fancn, partner a 100.0 9.9E-29 3.4E-33 189.2 25.4 212 28-291 56-343 (356)
121 1l0q_A Surface layer protein; 100.0 4.6E-28 1.6E-32 195.0 30.1 224 6-290 27-259 (391)
122 3bws_A Protein LP49; two-domai 100.0 3.4E-28 1.2E-32 198.3 28.0 223 8-290 167-416 (433)
123 3bws_A Protein LP49; two-domai 100.0 2.8E-28 9.4E-33 198.9 24.2 223 9-290 121-360 (433)
124 3mmy_A MRNA export factor; mRN 100.0 2.4E-28 8.1E-33 194.7 22.6 215 6-259 82-348 (368)
125 1l0q_A Surface layer protein; 100.0 2.6E-27 9E-32 190.6 27.6 207 27-290 3-215 (391)
126 3vu4_A KMHSV2; beta-propeller 100.0 3.4E-27 1.2E-31 187.4 24.9 214 11-261 59-340 (355)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1E-25 3.4E-30 182.4 28.2 220 7-288 175-411 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.6E-24 9E-29 174.1 27.4 206 27-290 144-369 (415)
129 2ojh_A Uncharacterized protein 99.9 3.9E-25 1.3E-29 170.8 21.4 230 6-291 37-288 (297)
130 2oit_A Nucleoporin 214KDA; NH2 99.9 2.9E-24 9.9E-29 174.5 21.7 203 10-259 36-280 (434)
131 1nir_A Nitrite reductase; hemo 99.9 3.6E-23 1.2E-27 172.4 25.5 247 17-291 144-437 (543)
132 1ri6_A Putative isomerase YBHE 99.9 7.3E-23 2.5E-27 161.5 26.0 241 7-290 34-292 (343)
133 3vgz_A Uncharacterized protein 99.9 1.2E-22 4E-27 161.1 26.9 228 9-290 87-329 (353)
134 2oit_A Nucleoporin 214KDA; NH2 99.9 9.7E-24 3.3E-28 171.4 20.4 168 7-203 89-280 (434)
135 2ecf_A Dipeptidyl peptidase IV 99.9 7.4E-23 2.5E-27 177.6 24.3 242 10-290 36-352 (741)
136 1nir_A Nitrite reductase; hemo 99.9 1.5E-22 5.2E-27 168.7 22.7 243 6-290 217-494 (543)
137 3u4y_A Uncharacterized protein 99.9 3.2E-22 1.1E-26 157.3 22.9 223 17-290 4-236 (331)
138 3vgz_A Uncharacterized protein 99.9 5.3E-21 1.8E-25 151.5 29.2 226 6-290 36-287 (353)
139 3hfq_A Uncharacterized protein 99.9 1.6E-21 5.6E-26 154.3 26.0 239 8-290 37-301 (347)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.9E-23 6.5E-28 180.9 15.7 245 11-290 17-321 (723)
141 3u4y_A Uncharacterized protein 99.9 1.6E-21 5.4E-26 153.3 24.7 233 10-290 40-288 (331)
142 2ojh_A Uncharacterized protein 99.9 8.8E-22 3E-26 151.9 21.3 206 31-290 17-232 (297)
143 1pby_B Quinohemoprotein amine 99.9 5.4E-21 1.9E-25 150.4 22.8 221 27-290 2-295 (337)
144 1pby_B Quinohemoprotein amine 99.9 1.6E-20 5.6E-25 147.7 24.7 222 12-260 35-313 (337)
145 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-21 4.5E-26 168.9 19.9 226 11-290 82-371 (706)
146 1ri6_A Putative isomerase YBHE 99.9 2.2E-20 7.4E-25 147.4 24.8 216 28-290 7-246 (343)
147 1jmx_B Amine dehydrogenase; ox 99.9 8.2E-21 2.8E-25 150.2 21.6 230 16-290 5-310 (349)
148 1k32_A Tricorn protease; prote 99.9 1E-20 3.5E-25 169.8 22.4 217 11-290 245-487 (1045)
149 3o4h_A Acylamino-acid-releasin 99.9 1.1E-20 3.9E-25 159.6 19.9 217 9-290 20-261 (582)
150 1z68_A Fibroblast activation p 99.9 5.2E-21 1.8E-25 165.5 16.2 239 14-290 19-327 (719)
151 3scy_A Hypothetical bacterial 99.9 5.6E-19 1.9E-23 140.5 26.3 238 9-290 48-321 (361)
152 2z3z_A Dipeptidyl aminopeptida 99.9 3.2E-20 1.1E-24 160.3 20.4 235 11-290 26-327 (706)
153 2ecf_A Dipeptidyl peptidase IV 99.9 5.7E-20 2E-24 159.6 21.1 231 8-290 149-440 (741)
154 1k32_A Tricorn protease; prote 99.9 3.4E-20 1.2E-24 166.4 19.3 221 8-291 201-437 (1045)
155 1xfd_A DIP, dipeptidyl aminope 99.8 1.3E-19 4.4E-24 157.0 19.8 233 12-290 115-425 (723)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.2E-18 4.3E-23 138.7 23.4 241 11-291 40-326 (365)
157 1jmx_B Amine dehydrogenase; ox 99.8 2.3E-18 8E-23 136.0 23.2 222 12-259 44-327 (349)
158 4a5s_A Dipeptidyl peptidase 4 99.8 5E-19 1.7E-23 153.5 20.3 114 12-137 18-145 (740)
159 3hfq_A Uncharacterized protein 99.8 1.4E-17 4.8E-22 131.7 25.0 212 9-256 84-316 (347)
160 1q7f_A NHL, brain tumor CG1071 99.8 1.2E-16 4.1E-21 122.9 28.0 226 11-291 30-267 (286)
161 3pe7_A Oligogalacturonate lyas 99.8 9.6E-18 3.3E-22 134.6 19.7 224 12-290 82-366 (388)
162 3o4h_A Acylamino-acid-releasin 99.8 2.6E-18 8.8E-23 145.2 16.2 212 11-290 65-297 (582)
163 3fvz_A Peptidyl-glycine alpha- 99.8 1E-16 3.5E-21 125.8 23.8 240 10-291 23-308 (329)
164 3pe7_A Oligogalacturonate lyas 99.8 1.8E-17 6.3E-22 132.9 20.0 221 16-290 41-305 (388)
165 3scy_A Hypothetical bacterial 99.8 2.6E-16 8.7E-21 125.1 25.5 222 12-283 101-360 (361)
166 1z68_A Fibroblast activation p 99.8 5.9E-18 2E-22 146.5 17.1 231 13-290 62-371 (719)
167 3no2_A Uncharacterized protein 99.8 8E-16 2.7E-20 117.3 24.9 216 26-290 5-228 (276)
168 2xdw_A Prolyl endopeptidase; a 99.8 1.1E-15 3.9E-20 131.9 28.2 226 12-290 126-395 (710)
169 2oiz_A Aromatic amine dehydrog 99.8 2.5E-15 8.6E-20 119.2 26.5 242 15-287 54-360 (361)
170 2dg1_A DRP35, lactonase; beta 99.7 7.1E-15 2.4E-19 115.5 27.9 234 10-290 44-295 (333)
171 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.2E-16 1.4E-20 124.1 20.4 222 28-290 4-270 (365)
172 2oiz_A Aromatic amine dehydrog 99.7 1.1E-15 3.7E-20 121.3 22.5 103 34-139 29-146 (361)
173 3e5z_A Putative gluconolactona 99.7 3.3E-15 1.1E-19 115.4 24.0 224 9-290 26-272 (296)
174 2bkl_A Prolyl endopeptidase; m 99.7 7.1E-16 2.4E-20 132.9 21.4 225 11-290 121-378 (695)
175 3c5m_A Oligogalacturonate lyas 99.7 7.2E-17 2.5E-21 129.7 13.1 219 13-290 38-298 (396)
176 3c5m_A Oligogalacturonate lyas 99.7 2.8E-16 9.5E-21 126.3 15.9 219 15-290 85-366 (396)
177 3azo_A Aminopeptidase; POP fam 99.7 8.6E-16 2.9E-20 131.8 19.9 230 8-290 21-309 (662)
178 1q7f_A NHL, brain tumor CG1071 99.7 1.3E-14 4.4E-19 111.5 24.1 201 11-260 77-283 (286)
179 3azo_A Aminopeptidase; POP fam 99.7 2.3E-15 7.7E-20 129.2 21.3 222 15-288 81-348 (662)
180 2gop_A Trilobed protease; beta 99.7 6.9E-15 2.4E-19 116.1 21.4 206 11-284 59-311 (347)
181 1rwi_B Serine/threonine-protei 99.7 3.3E-14 1.1E-18 108.2 23.7 222 12-290 25-249 (270)
182 4a5s_A Dipeptidyl peptidase 4 99.7 6.3E-16 2.2E-20 134.1 15.6 192 58-290 18-275 (740)
183 3dsm_A Uncharacterized protein 99.7 5.4E-14 1.9E-18 110.1 25.0 221 12-290 45-283 (328)
184 2dg1_A DRP35, lactonase; beta 99.7 1.9E-14 6.6E-19 113.0 20.0 228 10-290 5-248 (333)
185 3dsm_A Uncharacterized protein 99.6 7.5E-14 2.6E-18 109.3 21.0 208 34-290 15-240 (328)
186 1yr2_A Prolyl oligopeptidase; 99.6 2.7E-13 9.1E-18 117.7 26.3 225 12-290 164-422 (741)
187 3fvz_A Peptidyl-glycine alpha- 99.6 2.3E-13 8E-18 106.6 23.6 202 12-258 92-323 (329)
188 1qks_A Cytochrome CD1 nitrite 99.6 8.2E-13 2.8E-17 110.2 27.4 196 27-259 168-375 (567)
189 1xip_A Nucleoporin NUP159; bet 99.6 2.4E-14 8.4E-19 113.0 16.4 175 58-291 39-230 (388)
190 2z2n_A Virginiamycin B lyase; 99.6 3E-12 1E-16 98.7 27.8 224 10-290 14-240 (299)
191 2gop_A Trilobed protease; beta 99.6 2.3E-13 7.7E-18 107.5 20.4 207 9-290 13-277 (347)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4E-12 1.4E-16 98.8 25.0 227 11-289 18-282 (314)
193 3hrp_A Uncharacterized protein 99.6 2.7E-12 9.4E-17 103.3 24.5 245 11-291 131-396 (409)
194 2z2n_A Virginiamycin B lyase; 99.6 1.3E-11 4.4E-16 95.1 27.5 222 10-290 56-281 (299)
195 2mad_H Methylamine dehydrogena 99.6 6.9E-12 2.4E-16 99.7 26.4 109 27-139 33-162 (373)
196 1rwi_B Serine/threonine-protei 99.6 6E-13 2E-17 101.2 19.5 197 11-259 67-266 (270)
197 3g4e_A Regucalcin; six bladed 99.6 2.5E-11 8.4E-16 93.7 28.4 229 11-290 13-257 (297)
198 3e5z_A Putative gluconolactona 99.6 3.6E-12 1.2E-16 98.3 22.8 197 9-258 67-287 (296)
199 1qks_A Cytochrome CD1 nitrite 99.5 7.9E-12 2.7E-16 104.3 25.6 245 9-290 195-518 (567)
200 1xip_A Nucleoporin NUP159; bet 99.5 5.2E-13 1.8E-17 105.4 17.4 146 11-203 38-193 (388)
201 3no2_A Uncharacterized protein 99.5 1E-11 3.4E-16 94.6 23.4 184 11-245 37-231 (276)
202 2hz6_A Endoplasmic reticulum t 99.5 1.1E-14 3.9E-19 115.7 6.3 181 27-260 10-195 (369)
203 3sjl_D Methylamine dehydrogena 99.5 4E-12 1.4E-16 100.1 20.2 249 16-290 38-347 (386)
204 2xdw_A Prolyl endopeptidase; a 99.5 5.7E-12 2E-16 108.9 23.1 222 20-290 81-351 (710)
205 2qc5_A Streptogramin B lactona 99.5 9.7E-11 3.3E-15 90.2 27.8 224 10-290 19-245 (300)
206 2bkl_A Prolyl endopeptidase; m 99.5 3.5E-12 1.2E-16 110.0 20.1 220 19-290 76-334 (695)
207 2qc5_A Streptogramin B lactona 99.5 1.5E-10 5.1E-15 89.2 27.1 222 11-290 62-287 (300)
208 2ghs_A AGR_C_1268P; regucalcin 99.5 3.3E-10 1.1E-14 88.6 28.9 225 13-290 51-287 (326)
209 2ece_A 462AA long hypothetical 99.5 2.5E-11 8.4E-16 96.4 21.0 233 27-290 97-396 (462)
210 3iuj_A Prolyl endopeptidase; h 99.4 4.3E-11 1.5E-15 103.1 23.4 224 11-290 129-386 (693)
211 3c75_H MADH, methylamine dehyd 99.4 1.2E-11 4.1E-16 99.0 18.4 233 36-290 99-386 (426)
212 3dr2_A Exported gluconolactona 99.4 2.2E-10 7.5E-15 88.7 22.5 224 9-290 43-292 (305)
213 2mad_H Methylamine dehydrogena 99.4 4.2E-10 1.4E-14 89.5 23.5 217 15-260 70-353 (373)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 4.6E-10 1.6E-14 87.1 22.5 200 10-258 70-300 (314)
215 3sjl_D Methylamine dehydrogena 99.3 3.6E-10 1.2E-14 89.1 20.1 236 15-285 82-384 (386)
216 2qe8_A Uncharacterized protein 99.3 3E-09 1E-13 83.7 24.7 260 11-290 17-306 (343)
217 1mda_H Methylamine dehydrogena 99.3 7.1E-10 2.4E-14 87.4 19.8 103 28-133 34-158 (368)
218 3g4e_A Regucalcin; six bladed 99.3 6.1E-09 2.1E-13 80.2 24.2 192 8-246 51-261 (297)
219 1yr2_A Prolyl oligopeptidase; 99.3 2.2E-10 7.6E-15 99.5 16.7 195 14-259 212-443 (741)
220 3nol_A Glutamine cyclotransfer 99.2 1.8E-08 6E-13 74.5 22.4 188 48-290 33-240 (262)
221 2qe8_A Uncharacterized protein 99.2 5.5E-09 1.9E-13 82.2 20.6 207 10-254 66-318 (343)
222 2ghs_A AGR_C_1268P; regucalcin 99.2 2.8E-08 9.5E-13 77.6 24.4 188 9-246 88-291 (326)
223 3c75_H MADH, methylamine dehyd 99.2 5.9E-09 2E-13 83.6 20.7 219 15-260 122-405 (426)
224 2iwa_A Glutamine cyclotransfer 99.2 1.8E-08 6.2E-13 75.3 22.0 192 46-290 9-221 (266)
225 3hrp_A Uncharacterized protein 99.2 1.1E-08 3.6E-13 82.5 22.2 189 57-291 131-339 (409)
226 1kb0_A Quinohemoprotein alcoho 99.2 8.1E-09 2.8E-13 88.5 21.2 111 28-140 176-353 (677)
227 2iwa_A Glutamine cyclotransfer 99.2 2.1E-08 7.3E-13 74.9 20.8 198 13-258 23-238 (266)
228 1yiq_A Quinohemoprotein alcoho 99.1 3E-08 1E-12 85.2 24.1 103 35-139 182-344 (689)
229 1fwx_A Nitrous oxide reductase 99.1 5E-09 1.7E-13 86.3 17.5 264 16-291 90-404 (595)
230 1npe_A Nidogen, entactin; glyc 99.1 7.2E-07 2.5E-11 67.4 28.9 224 10-288 35-264 (267)
231 3nok_A Glutaminyl cyclase; bet 99.1 4.6E-08 1.6E-12 72.3 20.7 153 14-204 58-213 (268)
232 3mbr_X Glutamine cyclotransfer 99.1 2E-07 6.8E-12 68.4 22.8 189 47-290 10-219 (243)
233 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.1E-07 3.8E-12 75.7 23.4 184 28-260 145-340 (376)
234 1mda_H Methylamine dehydrogena 99.1 1.2E-08 4.1E-13 80.4 17.1 104 15-133 69-194 (368)
235 3nol_A Glutamine cyclotransfer 99.1 1.1E-07 3.7E-12 70.3 20.6 156 13-204 45-204 (262)
236 3nok_A Glutaminyl cyclase; bet 99.0 2.2E-07 7.7E-12 68.7 21.3 188 47-290 44-250 (268)
237 3mbr_X Glutamine cyclotransfer 99.0 3.3E-07 1.1E-11 67.2 21.9 159 10-205 20-183 (243)
238 3iuj_A Prolyl endopeptidase; h 99.0 3.8E-08 1.3E-12 84.9 18.8 186 55-290 127-341 (693)
239 3q7m_A Lipoprotein YFGL, BAMB; 99.0 4.8E-08 1.6E-12 77.8 18.2 149 27-205 54-211 (376)
240 3dr2_A Exported gluconolactona 99.0 1.1E-07 3.8E-12 73.5 19.7 195 47-291 35-255 (305)
241 2hz6_A Endoplasmic reticulum t 99.0 1.4E-10 4.9E-15 92.1 3.0 147 68-262 8-154 (369)
242 3hxj_A Pyrrolo-quinoline quino 99.0 5E-08 1.7E-12 76.1 17.4 202 27-290 108-310 (330)
243 1fwx_A Nitrous oxide reductase 99.0 5.1E-08 1.8E-12 80.4 17.6 221 10-259 133-433 (595)
244 2ece_A 462AA long hypothetical 99.0 2.2E-07 7.7E-12 74.1 20.5 185 66-290 93-336 (462)
245 1yiq_A Quinohemoprotein alcoho 99.0 1E-07 3.5E-12 81.9 20.0 75 15-94 239-344 (689)
246 1kb0_A Quinohemoprotein alcoho 99.0 6.9E-08 2.4E-12 82.8 18.2 156 15-204 247-510 (677)
247 3qqz_A Putative uncharacterize 98.8 4.6E-06 1.6E-10 62.0 22.1 210 11-255 27-251 (255)
248 2p4o_A Hypothetical protein; p 98.8 1.6E-05 5.4E-10 61.4 28.9 234 11-290 32-273 (306)
249 3hxj_A Pyrrolo-quinoline quino 98.8 2.1E-07 7.2E-12 72.5 14.0 177 28-259 149-326 (330)
250 3v65_B Low-density lipoprotein 98.7 4.5E-05 1.5E-09 60.9 26.8 202 10-260 115-321 (386)
251 2fp8_A Strictosidine synthase; 98.7 2.5E-05 8.4E-10 60.7 23.7 197 11-256 19-268 (322)
252 1k3i_A Galactose oxidase precu 98.7 8.3E-06 2.8E-10 69.9 22.7 114 15-135 190-325 (656)
253 2xe4_A Oligopeptidase B; hydro 98.7 4.2E-06 1.4E-10 72.8 21.0 113 12-134 175-305 (751)
254 1npe_A Nidogen, entactin; glyc 98.6 5.9E-05 2E-09 56.8 26.7 186 27-258 2-199 (267)
255 1kv9_A Type II quinohemoprotei 98.6 2.1E-05 7.1E-10 67.5 22.8 110 28-139 164-339 (668)
256 3v64_C Agrin; beta propeller, 98.6 0.00011 3.9E-09 57.7 28.0 201 11-260 73-278 (349)
257 2ad6_A Methanol dehydrogenase 98.6 3.2E-05 1.1E-09 65.0 21.9 110 28-140 162-342 (571)
258 4a2l_A BT_4663, two-component 98.6 0.00031 1.1E-08 61.6 29.1 238 10-290 214-467 (795)
259 1flg_A Protein (quinoprotein e 98.6 2.5E-05 8.6E-10 65.7 21.1 61 79-141 291-363 (582)
260 1kv9_A Type II quinohemoprotei 98.5 3.8E-06 1.3E-10 72.0 16.0 75 15-94 234-339 (668)
261 1ijq_A LDL receptor, low-densi 98.5 0.00015 5.2E-09 56.1 27.0 203 11-260 30-241 (316)
262 3amr_A 3-phytase; beta-propell 98.5 9.3E-05 3.2E-09 57.3 21.6 189 27-256 41-262 (355)
263 4a2l_A BT_4663, two-component 98.5 0.00038 1.3E-08 61.2 27.3 234 10-290 356-601 (795)
264 3p5b_L Low density lipoprotein 98.4 0.00035 1.2E-08 56.0 28.2 205 10-261 111-324 (400)
265 1w6s_A Methanol dehydrogenase 98.4 9.4E-05 3.2E-09 62.3 21.3 110 28-140 168-349 (599)
266 3qqz_A Putative uncharacterize 98.4 0.00024 8.3E-09 52.8 21.0 203 54-290 24-239 (255)
267 1w6s_A Methanol dehydrogenase 98.4 8.5E-05 2.9E-09 62.6 20.1 111 27-141 63-199 (599)
268 3v9f_A Two-component system se 98.3 0.00019 6.6E-09 62.8 22.2 227 10-290 362-598 (781)
269 3v64_C Agrin; beta propeller, 98.3 0.00059 2E-08 53.6 25.8 196 11-258 34-235 (349)
270 2fp8_A Strictosidine synthase; 98.3 0.00058 2E-08 52.9 22.4 113 12-134 81-217 (322)
271 3tc9_A Hypothetical hydrolase; 98.3 0.00064 2.2E-08 55.1 22.6 152 12-201 138-301 (430)
272 2ad6_A Methanol dehydrogenase 98.3 9.5E-05 3.3E-09 62.2 17.8 58 36-95 272-342 (571)
273 3m0c_C LDL receptor, low-densi 98.3 0.0018 6.2E-08 56.4 27.7 205 10-261 423-636 (791)
274 1flg_A Protein (quinoprotein e 98.2 4.9E-05 1.7E-09 64.0 15.6 58 36-95 291-362 (582)
275 2p4o_A Hypothetical protein; p 98.2 0.00093 3.2E-08 51.4 23.6 200 46-290 22-227 (306)
276 3v9f_A Two-component system se 98.2 0.0032 1.1E-07 55.2 26.5 227 10-290 257-510 (781)
277 1ijq_A LDL receptor, low-densi 98.1 0.0015 5.2E-08 50.5 25.0 185 28-258 3-196 (316)
278 3v65_B Low-density lipoprotein 98.1 0.0019 6.5E-08 51.5 24.8 184 28-258 89-278 (386)
279 1n7d_A LDL receptor, low-densi 98.1 4.2E-05 1.4E-09 65.9 12.8 202 11-259 406-616 (699)
280 3sov_A LRP-6, low-density lipo 98.1 0.0018 6.1E-08 50.1 28.1 201 11-260 35-241 (318)
281 4hw6_A Hypothetical protein, I 98.1 0.0015 5E-08 53.0 20.0 154 12-200 140-303 (433)
282 3ii7_A Kelch-like protein 7; p 97.9 0.0026 9E-08 48.8 18.8 188 27-259 57-274 (306)
283 2xn4_A Kelch-like protein 2; s 97.9 0.0034 1.2E-07 48.1 18.6 188 27-259 63-278 (302)
284 2vpj_A Kelch-like protein 12; 97.9 0.0029 1E-07 48.4 18.0 188 27-259 64-280 (301)
285 3p5b_L Low density lipoprotein 97.8 0.0079 2.7E-07 48.2 26.8 184 28-258 85-278 (400)
286 2xe4_A Oligopeptidase B; hydro 97.8 0.0013 4.6E-08 57.3 16.6 72 58-135 175-258 (751)
287 3a9g_A Putative uncharacterize 97.8 0.008 2.7E-07 47.2 23.4 105 11-121 29-153 (354)
288 2p9w_A MAL S 1 allergenic prot 97.8 0.0051 1.7E-07 47.3 17.1 175 54-257 10-215 (334)
289 3m0c_C LDL receptor, low-densi 97.7 0.018 6.2E-07 50.3 27.0 184 28-258 397-590 (791)
290 3sov_A LRP-6, low-density lipo 97.7 0.0085 2.9E-07 46.3 22.4 185 28-258 6-198 (318)
291 4hw6_A Hypothetical protein, I 97.7 0.015 5E-07 47.1 21.9 116 11-132 182-303 (433)
292 3ei3_A DNA damage-binding prot 97.7 0.027 9.2E-07 51.5 23.2 166 4-201 822-999 (1158)
293 2xbg_A YCF48-like protein; pho 97.7 0.012 4E-07 45.8 22.5 220 10-290 79-308 (327)
294 4a0p_A LRP6, LRP-6, low-densit 97.7 0.022 7.4E-07 48.5 26.6 199 11-260 37-240 (628)
295 3kya_A Putative phosphatase; s 97.6 0.019 6.4E-07 47.1 22.2 113 12-132 140-277 (496)
296 1k3i_A Galactose oxidase precu 97.6 0.0093 3.2E-07 51.2 18.8 75 61-135 190-276 (656)
297 2ism_A Putative oxidoreductase 97.6 0.016 5.5E-07 45.5 23.9 104 11-121 31-153 (352)
298 2p9w_A MAL S 1 allergenic prot 97.6 0.016 5.4E-07 44.6 20.4 160 14-201 16-215 (334)
299 3s94_A LRP-6, low-density lipo 97.6 0.029 1E-06 47.7 22.5 202 10-260 39-246 (619)
300 2vpj_A Kelch-like protein 12; 97.5 0.016 5.5E-07 44.2 20.2 187 27-259 16-233 (301)
301 1zgk_A Kelch-like ECH-associat 97.5 0.01 3.5E-07 45.5 16.0 187 27-259 72-289 (308)
302 1n7d_A LDL receptor, low-densi 97.5 0.0012 4E-08 57.0 11.3 97 35-135 385-486 (699)
303 3tc9_A Hypothetical hydrolase; 97.5 0.03 1E-06 45.3 22.5 115 11-133 179-301 (430)
304 3ei3_A DNA damage-binding prot 97.5 0.065 2.2E-06 49.1 24.2 178 37-258 808-1000(1158)
305 1zgk_A Kelch-like ECH-associat 97.4 0.02 6.9E-07 43.9 16.9 187 27-259 26-242 (308)
306 4asc_A Kelch repeat and BTB do 97.3 0.014 4.8E-07 44.9 15.3 103 27-135 47-176 (315)
307 3ii7_A Kelch-like protein 7; p 97.3 0.031 1.1E-06 42.7 20.0 103 27-135 13-129 (306)
308 2xn4_A Kelch-like protein 2; s 97.3 0.031 1.1E-06 42.6 20.6 187 27-259 17-231 (302)
309 2be1_A Serine/threonine-protei 97.3 0.02 6.7E-07 44.5 15.3 115 28-142 12-139 (339)
310 2woz_A Kelch repeat and BTB do 97.3 0.029 9.8E-07 43.2 16.3 103 27-135 58-186 (318)
311 3kya_A Putative phosphatase; s 97.2 0.029 9.8E-07 46.0 16.2 66 59-124 141-214 (496)
312 2xbg_A YCF48-like protein; pho 97.2 0.052 1.8E-06 42.1 23.3 107 11-130 122-231 (327)
313 3pbp_A Nucleoporin NUP82; beta 97.2 0.061 2.1E-06 42.9 17.3 121 68-202 31-159 (452)
314 3amr_A 3-phytase; beta-propell 97.1 0.029 1E-06 43.6 14.2 121 11-136 128-267 (355)
315 2xzh_A Clathrin heavy chain 1; 97.1 0.064 2.2E-06 41.2 25.6 203 17-260 73-293 (365)
316 3pbp_A Nucleoporin NUP82; beta 97.1 0.08 2.8E-06 42.2 17.8 149 28-197 34-208 (452)
317 1bpo_A Protein (clathrin); cla 96.7 0.16 5.6E-06 40.7 26.4 204 16-260 71-292 (494)
318 2uvk_A YJHT; unknown function, 96.6 0.16 5.6E-06 39.7 16.6 23 238-260 317-345 (357)
319 4a0p_A LRP6, LRP-6, low-densit 96.3 0.44 1.5E-05 40.6 27.0 201 11-260 340-552 (628)
320 1xi4_A Clathrin heavy chain; a 96.1 0.36 1.2E-05 44.8 16.2 198 27-260 78-292 (1630)
321 2woz_A Kelch repeat and BTB do 96.1 0.34 1.2E-05 37.2 17.5 101 28-135 18-138 (318)
322 4asc_A Kelch repeat and BTB do 96.1 0.34 1.2E-05 37.1 21.7 185 28-258 7-222 (315)
323 2g8s_A Glucose/sorbosone dehyd 96.0 0.39 1.3E-05 37.6 22.2 106 11-121 18-148 (353)
324 1tl2_A L10, protein (tachylect 96.0 0.021 7E-07 41.1 6.4 106 11-127 41-157 (236)
325 3sre_A PON1, serum paraoxonase 95.9 0.46 1.6E-05 37.2 21.1 55 232-290 226-282 (355)
326 2uvk_A YJHT; unknown function, 95.8 0.52 1.8E-05 36.8 16.3 92 27-123 21-128 (357)
327 2be1_A Serine/threonine-protei 95.7 0.15 5E-06 39.6 10.6 109 70-204 11-133 (339)
328 1tl2_A L10, protein (tachylect 95.6 0.4 1.4E-05 34.6 13.9 185 69-290 4-197 (236)
329 3s94_A LRP-6, low-density lipo 95.6 0.91 3.1E-05 38.6 25.8 158 11-202 349-511 (619)
330 2zwa_A Leucine carboxyl methyl 94.5 2.1 7.3E-05 37.0 20.2 107 27-135 399-524 (695)
331 4gq2_M Nucleoporin NUP120; bet 94.0 2.5 8.5E-05 38.1 15.1 37 58-95 237-273 (950)
332 2zwa_A Leucine carboxyl methyl 93.5 2.5 8.7E-05 36.5 14.0 107 27-135 453-579 (695)
333 1cru_A Protein (soluble quinop 93.5 2.6 8.9E-05 34.3 14.8 108 11-122 27-163 (454)
334 3ott_A Two-component system se 93.1 4.1 0.00014 35.6 22.1 115 12-135 420-547 (758)
335 3das_A Putative oxidoreductase 92.7 2.9 9.9E-05 32.6 27.0 108 11-122 32-159 (347)
336 2ism_A Putative oxidoreductase 92.5 3 0.0001 32.5 19.2 66 10-76 74-153 (352)
337 2xzh_A Clathrin heavy chain 1; 92.1 3.3 0.00011 32.1 25.4 205 10-259 106-334 (365)
338 3ott_A Two-component system se 91.5 6.6 0.00023 34.3 25.3 222 11-289 63-293 (758)
339 2wg3_C Hedgehog-interacting pr 89.8 7.2 0.00025 31.8 13.0 109 11-123 14-159 (463)
340 3a9g_A Putative uncharacterize 89.2 6.6 0.00023 30.6 11.5 75 57-134 29-115 (354)
341 1cru_A Protein (soluble quinop 89.2 7.9 0.00027 31.5 17.3 33 103-135 27-59 (454)
342 3qhy_B Beta-lactamase inhibito 89.1 5.8 0.0002 29.8 16.1 70 173-260 180-249 (282)
343 4fhn_B Nucleoporin NUP120; pro 88.9 1.5 5.1E-05 40.4 8.2 37 58-95 239-275 (1139)
344 1bpo_A Protein (clathrin); cla 88.7 8.5 0.00029 31.2 27.0 205 10-259 105-333 (494)
345 1xi4_A Clathrin heavy chain; a 88.3 18 0.00061 34.4 15.5 204 11-259 106-333 (1630)
346 3qhy_B Beta-lactamase inhibito 87.6 7.4 0.00025 29.2 16.8 185 11-258 24-208 (282)
347 3f7f_A Nucleoporin NUP120; nuc 87.4 14 0.00047 32.0 13.4 34 172-205 221-254 (729)
348 3kci_A Probable E3 ubiquitin-p 86.7 10 0.00035 29.9 23.1 205 28-258 118-346 (389)
349 3sbq_A Nitrous-oxide reductase 86.3 6.9 0.00024 32.8 9.6 77 6-88 318-408 (638)
350 4gq2_M Nucleoporin NUP120; bet 81.0 32 0.0011 31.1 17.7 38 104-141 237-274 (950)
351 2g8s_A Glucose/sorbosone dehyd 80.8 18 0.00061 28.1 20.1 108 10-121 65-215 (353)
352 3sbq_A Nitrous-oxide reductase 79.5 11 0.00038 31.6 8.3 78 56-134 322-409 (638)
353 3das_A Putative oxidoreductase 77.0 24 0.00082 27.5 11.1 77 56-133 31-116 (347)
354 3sre_A PON1, serum paraoxonase 76.7 25 0.00085 27.5 25.2 104 13-121 52-183 (355)
355 3zwu_A Alkaline phosphatase PH 75.6 16 0.00055 30.9 8.6 59 60-121 479-549 (592)
356 3q6k_A 43.2 kDa salivary prote 75.1 29 0.00099 27.4 22.0 146 37-201 124-306 (381)
357 2wg3_C Hedgehog-interacting pr 75.0 33 0.0011 28.0 12.1 30 103-132 14-44 (463)
358 4fhn_B Nucleoporin NUP120; pro 74.7 2.6 8.9E-05 38.8 4.0 29 232-260 243-271 (1139)
359 3s25_A Hypothetical 7-bladed b 71.8 30 0.001 26.2 20.2 84 35-132 36-137 (302)
360 4d9s_A UVB-resistance protein 70.2 39 0.0013 26.8 22.2 214 11-257 68-305 (406)
361 4a9v_A PHOX; hydrolase, beta-p 69.9 37 0.0013 28.6 9.2 62 58-122 477-550 (592)
362 3f7f_A Nucleoporin NUP120; nuc 69.1 9.2 0.00031 33.1 5.7 28 68-95 230-257 (729)
363 3b7f_A Glycosyl hydrolase, BNR 68.5 41 0.0014 26.4 12.3 114 10-128 54-203 (394)
364 3zwu_A Alkaline phosphatase PH 66.2 27 0.00091 29.6 7.9 54 232-290 481-546 (592)
365 1suu_A DNA gyrase subunit A; t 65.0 44 0.0015 25.5 14.0 124 6-134 95-232 (312)
366 3q6k_A 43.2 kDa salivary prote 59.0 65 0.0022 25.5 18.5 193 80-289 124-338 (381)
367 4a9v_A PHOX; hydrolase, beta-p 57.0 59 0.002 27.4 8.2 59 12-75 477-548 (592)
368 3uc1_A DNA gyrase subunit A; D 56.2 67 0.0023 24.7 20.1 124 7-135 91-230 (327)
369 3mez_B Mannose-specific lectin 54.3 37 0.0013 21.2 9.4 26 106-133 59-84 (113)
370 4d9s_A UVB-resistance protein 52.3 86 0.0029 24.8 24.4 214 12-258 122-358 (406)
371 1sqj_A OXG-RCBH, oligoxylogluc 47.9 1.5E+02 0.005 26.2 11.1 64 9-76 13-83 (789)
372 1olz_A Semaphorin 4D; developm 44.4 1.1E+02 0.0039 26.3 8.3 58 70-128 416-477 (663)
373 3kci_A Probable E3 ubiquitin-p 43.5 1.2E+02 0.004 23.8 21.6 207 28-257 12-241 (389)
374 3al9_A Plexin-A2; beta-propell 39.8 1.4E+02 0.0046 25.0 7.9 64 227-290 402-466 (539)
375 3no0_A DNA gyrase subunit A; D 39.7 1.2E+02 0.0039 22.7 17.2 164 7-201 64-246 (276)
376 3b7f_A Glycosyl hydrolase, BNR 39.3 1.4E+02 0.0046 23.4 12.8 101 27-129 23-143 (394)
377 1q47_A Semaphorin 3A; beta pro 36.0 1.3E+02 0.0043 24.9 7.1 69 59-128 406-487 (495)
378 1q47_A Semaphorin 3A; beta pro 34.6 1.5E+02 0.0053 24.4 7.4 71 12-83 405-487 (495)
379 4gz8_A Semaphorin-3A; multi-do 33.6 1.8E+02 0.0062 25.1 7.8 55 28-83 431-495 (667)
380 1ukf_A Avirulence protein AVRP 33.5 48 0.0016 23.0 3.5 37 56-92 118-154 (188)
381 1sqj_A OXG-RCBH, oligoxylogluc 27.6 3.2E+02 0.011 24.1 9.2 65 56-121 14-83 (789)
382 3nvq_A Semaphorin-7A; beta-pro 27.3 2.3E+02 0.0079 24.0 7.3 73 10-83 361-444 (590)
383 3al9_A Plexin-A2; beta-propell 25.7 1.3E+02 0.0044 25.1 5.6 69 59-128 402-476 (539)
384 4hvt_A Ritya.17583.B, post-pro 25.1 3.4E+02 0.012 23.6 21.6 70 15-89 133-226 (711)
385 4gz8_A Semaphorin-3A; multi-do 24.8 2.7E+02 0.0093 24.1 7.4 58 70-128 430-495 (667)
386 3nvq_A Semaphorin-7A; beta-pro 24.4 2.7E+02 0.0093 23.6 7.2 59 70-129 381-445 (590)
387 3s25_A Hypothetical 7-bladed b 23.8 2.4E+02 0.008 21.3 20.9 103 16-135 109-218 (302)
388 2cn3_A Xyloglucanase, beta-1,4 22.1 3.9E+02 0.013 23.2 11.3 61 12-76 24-91 (737)
389 3oky_B Putative uncharacterize 20.2 3.9E+02 0.013 22.5 8.0 71 59-129 405-496 (565)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.8e-44 Score=279.94 Aligned_cols=234 Identities=15% Similarity=0.177 Sum_probs=203.4
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
...|.+.|++++|+|++ ++|++|+.||.|++||+++++.+..+..|..+|.+++|+| ++++|++|+.|++|++||
T Consensus 9 ~~~h~~~V~~~~fsp~~----~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTE----PWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEE
T ss_pred ecCCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEE
Confidence 34688999999999999 5999999999999999999999999999999999999999 899999999999999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.+++.+..+ .+|...|.+++|+|++++|++|+.|++|++||++++....
T Consensus 84 ~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~--------------------------- 133 (304)
T 2ynn_A 84 YNTGEKVVDF---EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE--------------------------- 133 (304)
T ss_dssp TTTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE---------------------------
T ss_pred CCCCcEEEEE---eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh---------------------------
Confidence 9999998888 7999999999999999999999999999999998763221
Q ss_pred ccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348 166 STRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA 242 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 242 (291)
..+.+|...|.+++|+ +.+|++|+.|++|++||++..... ......+...+..+.+.+.+++.+|+
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-----------FTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS-----------EEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc-----------ceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 1224589999999997 468999999999999999876542 22334556778888888888899999
Q ss_pred EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 243 VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 243 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+|+.||+|++||++++++ ... ..+|...|.+++|+|++++|++
T Consensus 203 s~s~D~~i~iWd~~~~~~----~~~--~~~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSC----VAT--LEGHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp EEETTSEEEEEETTTTEE----EEE--EECCSSCEEEEEECSSSSEEEE
T ss_pred EEcCCCeEEEEeCCCCcc----cee--eCCCCCCEEEEEECCCCCEEEE
Confidence 999999999999998742 233 3478899999999999998874
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.7e-44 Score=285.05 Aligned_cols=229 Identities=14% Similarity=0.197 Sum_probs=193.2
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE----EeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH----FYGHGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
...++..|++++|+|++ .|++|+.||+|+|||+++++.+.. +.+|.+.|++++|+| ++++|++|+.|++|
T Consensus 78 ~~~~~~~v~~~~~s~d~-----~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i 151 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-----GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICI 151 (344)
T ss_dssp EEEESSCEEEEEEETTT-----EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eeccCCCEEEEEEeCCC-----eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeE
Confidence 34567889999999986 899999999999999998876544 348999999999999 99999999999999
Q ss_pred EEEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE 160 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
++||+++++.+..+ .+|...|.+++|+|++. +|++++.|++|++||+++++....+..
T Consensus 152 ~iwd~~~~~~~~~~---~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~------------------ 210 (344)
T 4gqb_B 152 KVWDLAQQVVLSSY---RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC------------------ 210 (344)
T ss_dssp EEEETTTTEEEEEE---CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------------------
T ss_pred EEEECCCCcEEEEE---cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec------------------
Confidence 99999999999888 79999999999999985 789999999999999998876554321
Q ss_pred cCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348 161 HFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW 237 (291)
Q Consensus 161 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (291)
..|...+.+++|+ +++|++|+.|++|++||+++.+. +..+.+|...|..++|+ |+
T Consensus 211 --------~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~------------~~~~~~h~~~v~~v~fs--p~ 268 (344)
T 4gqb_B 211 --------SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC------------VLSSAVHSQCVTGLVFS--PH 268 (344)
T ss_dssp -----------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C------------CEEEECCSSCEEEEEEC--SS
T ss_pred --------ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE------------EEEEcCCCCCEEEEEEc--cC
Confidence 1255678899997 45899999999999999998754 78888999988877665 55
Q ss_pred C-cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 238 Q-KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 238 ~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+ ++|++|+.||+|+|||+.+++ .+...+|.+.|++++|+|+++.|+
T Consensus 269 g~~~lasgs~D~~i~vwd~~~~~-------~~~~~~H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 269 SVPFLASLSEDCSLAVLDSSLSE-------LFRSQAHRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp SSCCEEEEETTSCEEEECTTCCE-------EEEECCCSSCEEEEEECSSSTTEE
T ss_pred CCeEEEEEeCCCeEEEEECCCCc-------EEEEcCCCCCEEEEEEeCCCCeEE
Confidence 7 689999999999999998873 334458999999999999997654
No 3
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8e-44 Score=284.19 Aligned_cols=283 Identities=63% Similarity=1.219 Sum_probs=246.1
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
|.+.|++++|+|+...++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|.++.+|++|+.||.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 56889999999997655679999999999999999999999999999999999999997789999999999999999999
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
++.+..+..+..|...|.+++|+|++++|++++.||.|++||+++++....+.....+.|+.............+.+...
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 98888775446899999999999999999999999999999999999988888888888888888877777777788888
Q ss_pred cccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcc--ccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348 169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ 246 (291)
Q Consensus 169 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 246 (291)
.+|...|.+++|+++++++++.|+.|++||+++.... ...........+..+..|...+..+++++++++++|++|+.
T Consensus 228 ~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 228 DIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp SSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT
T ss_pred cCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec
Confidence 8899999999999999999999999999999876542 22233334456788888888888888887777999999999
Q ss_pred CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
||.|++||+.+++........+....|...|++++|+|++++|++
T Consensus 308 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 352 (366)
T 3k26_A 308 VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA 352 (366)
T ss_dssp TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEE
Confidence 999999999998765544455554444789999999999999974
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.5e-43 Score=283.96 Aligned_cols=231 Identities=20% Similarity=0.293 Sum_probs=204.7
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
..|..+|++++|+|++ .+|++|+.||+|++||+.+++....+.+|.+.|.+++|+| ++.+|++|+.|++|++||+
T Consensus 105 ~gh~~~V~~~~~~p~~----~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVF----SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp ECCSSCEEEEEECSSS----SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEET
T ss_pred cccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeC
Confidence 3588999999999998 4999999999999999999999999999999999999999 8999999999999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
.+++++..+ .+|...|.+++|+|++.+|++|+.|++|++||++++..+..+
T Consensus 180 ~~~~~~~~~---~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-------------------------- 230 (410)
T 1vyh_C 180 QGFECIRTM---HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-------------------------- 230 (410)
T ss_dssp TSSCEEECC---CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE--------------------------
T ss_pred CCCceeEEE---cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE--------------------------
Confidence 999888887 799999999999999999999999999999999988765444
Q ss_pred cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC--------
Q psy10348 167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY-------- 236 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------- 236 (291)
.+|...|.++.|+ +.++++++.|++|++||+++.+. ...+..|...+.+++++++.
T Consensus 231 --~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 231 --TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC------------KAELREHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp --ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred --eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce------------eeEecCCCceEEEEEEcCcccccchhhh
Confidence 3488899999998 77999999999999999988744 67778888888888776532
Q ss_pred ----------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 237 ----------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 237 ----------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.+.+|++|+.||.|++||+.++++ ... ..+|...|++++|+|+|++|++
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~----~~~--~~~h~~~v~~v~~~~~g~~l~s 355 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LMT--LVGHDNWVRGVLFHSGGKFILS 355 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEE----EEE--EECCSSCEEEEEECSSSSCEEE
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCce----EEE--EECCCCcEEEEEEcCCCCEEEE
Confidence 267999999999999999998742 233 3378899999999999999874
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=270.24 Aligned_cols=228 Identities=13% Similarity=0.159 Sum_probs=202.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...|.+++|++++ .++++++.|++|++||+++++.+..+..|...+.+++|+| ++++|++|+.||.|++||++
T Consensus 78 gh~~~v~~~~~~~~~----~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 78 GHQLGVVSVDISHTL----PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp CCSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETT
T ss_pred cCCCCEEEEEECCCC----CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcC
Confidence 478899999999998 5999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
+++....+ ..|...|.+++|+|++++|++|+.||.|++||+++++.+..+
T Consensus 153 ~~~~~~~~---~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~--------------------------- 202 (321)
T 3ow8_A 153 SGKKEYSL---DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL--------------------------- 202 (321)
T ss_dssp TCSEEEEE---ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---------------------------
T ss_pred CCceeEEe---cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---------------------------
Confidence 99888877 688899999999999999999999999999999988765444
Q ss_pred ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348 168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 245 (291)
.+|..+|.+++|+ +++|++++.|+.|++||++.... +..+.+|...|..++|+ |++++|++|+
T Consensus 203 -~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~------------~~~~~~h~~~v~~~~~s--p~~~~l~s~s 267 (321)
T 3ow8_A 203 -EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL------------AGTLSGHASWVLNVAFC--PDDTHFVSSS 267 (321)
T ss_dssp -CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE------------EEEECCCSSCEEEEEEC--TTSSEEEEEE
T ss_pred -cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce------------eEEEcCCCCceEEEEEC--CCCCEEEEEe
Confidence 3488899999998 77999999999999999987743 67788888888776655 6699999999
Q ss_pred CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.||+|++||+.++++ .....+|...|.+++|+|+|++|++
T Consensus 268 ~D~~v~iwd~~~~~~------~~~~~~h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 268 SDKSVKVWDVGTRTC------VHTFFDHQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp TTSCEEEEETTTTEE------EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCcEEEEeCCCCEE------EEEEcCCCCcEEEEEECCCCCEEEE
Confidence 999999999998742 2233478899999999999999874
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=269.93 Aligned_cols=232 Identities=10% Similarity=0.190 Sum_probs=197.1
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.|.+.|++++|+|+...++.+|++|+.|++|+||++.+++. ...+.+|...|.+++|++ ++.++++++.|++|++||
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence 58999999999998766668999999999999999977653 456789999999999999 889999999999999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.+++.+..+ ..|...+.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 109 ~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~------------------------ 161 (321)
T 3ow8_A 109 LENGKQIKSI---DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD------------------------ 161 (321)
T ss_dssp TTTTEEEEEE---ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE------------------------
T ss_pred CCCCCEEEEE---eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec------------------------
Confidence 9999988888 6888899999999999999999999999999999877544332
Q ss_pred ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
.|...|.+++|+ +++|++++.|+.|++||+++++ .+..+.+|...+..++|+ |++++|++
T Consensus 162 ----~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~------------~~~~~~~h~~~v~~l~~s--pd~~~l~s 223 (321)
T 3ow8_A 162 ----TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK------------LLHTLEGHAMPIRSLTFS--PDSQLLVT 223 (321)
T ss_dssp ----CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCCCEEEEC--TTSCEEEE
T ss_pred ----CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------------EEEEEcccCCceeEEEEc--CCCCEEEE
Confidence 377789999998 7899999999999999998873 477888888888876655 66999999
Q ss_pred EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|+.||.|++||+.+++. .....+|...|.+++|+|+|++|++
T Consensus 224 ~s~dg~i~iwd~~~~~~------~~~~~~h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANL------AGTLSGHASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp ECTTSCEEEEETTTCCE------EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EcCCCeEEEEECCCcce------eEEEcCCCCceEEEEECCCCCEEEE
Confidence 99999999999998742 2233478899999999999999874
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-41 Score=262.21 Aligned_cols=225 Identities=20% Similarity=0.276 Sum_probs=192.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|..+|.+++|+|++ ++|++|+.|+.|++||+++++.+..+.+|.+.|.+++|+| ++.+|++|+.|++|++||++
T Consensus 53 ~~~~~v~~~~~~~~~----~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~ 127 (304)
T 2ynn_A 53 VTETPVRAGKFIARK----NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWE 127 (304)
T ss_dssp CCSSCEEEEEEEGGG----TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGG
T ss_pred ccCCcEEEEEEeCCC----CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECC
Confidence 467899999999999 4999999999999999999999999999999999999999 88999999999999999998
Q ss_pred Ccce-eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 88 TDIC-IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 88 ~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
++.. ...+ .+|...|.+++|+| ++.+|++|+.|++|++||+++......+.
T Consensus 128 ~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~------------------------ 180 (304)
T 2ynn_A 128 NNWALEQTF---EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT------------------------ 180 (304)
T ss_dssp GTTEEEEEE---CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEE------------------------
T ss_pred CCcchhhhh---cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceec------------------------
Confidence 7744 4455 78999999999999 57899999999999999998765432221
Q ss_pred ccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 166 STRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
..|...+..+.|. +.+|++++.|++|++||+++. ..+..+.+|...+..+.+. |++.+|
T Consensus 181 ---~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~------------~~~~~~~~h~~~v~~~~~~--p~~~~l 243 (304)
T 2ynn_A 181 ---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK------------SCVATLEGHMSNVSFAVFH--PTLPII 243 (304)
T ss_dssp ---CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT------------EEEEEEECCSSCEEEEEEC--SSSSEE
T ss_pred ---cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC------------ccceeeCCCCCCEEEEEEC--CCCCEE
Confidence 2366778888886 459999999999999999887 4478889999888876655 669999
Q ss_pred EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348 242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN 287 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 287 (291)
++|+.||+|++||+.+++. ...+ ..|...+.+++|+|++.
T Consensus 244 ~s~s~Dg~i~iWd~~~~~~----~~~~--~~~~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 244 ISGSEDGTLKIWNSSTYKV----EKTL--NVGLERSWCIATHPTGR 283 (304)
T ss_dssp EEEETTSCEEEEETTTCCE----EEEE--CCSSSSEEEEEECTTCG
T ss_pred EEEcCCCeEEEEECCCCce----eeec--cCCCccEEEEEECCCCC
Confidence 9999999999999998752 2333 35678999999999886
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.1e-42 Score=278.34 Aligned_cols=228 Identities=23% Similarity=0.403 Sum_probs=201.4
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ .+|++|+.||+|++||+.+++++..+.+|...|.+++|+| ++.+|++|+.|++|++||++
T Consensus 148 ~h~~~V~~v~~~~~~----~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~ 222 (410)
T 1vyh_C 148 GHTDSVQDISFDHSG----KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQ 222 (410)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETT
T ss_pred ccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECC
Confidence 478999999999998 5999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
++.++..+ .+|...|.++.|+|++.+|++|+.|+.|++||+++++....+.
T Consensus 223 ~~~~~~~~---~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-------------------------- 273 (410)
T 1vyh_C 223 TGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-------------------------- 273 (410)
T ss_dssp TCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------------
T ss_pred CCcEEEEE---eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec--------------------------
Confidence 99998888 7999999999999999999999999999999999887554432
Q ss_pred ccccCcceeEEEEc----------------------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348 168 RDIHRNYVDCVRWL----------------------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC 225 (291)
Q Consensus 168 ~~~~~~~v~~~~~~----------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
.|...|.+++|+ +.+|++|+.|+.|++||++++. .+..+.+|..
T Consensus 274 --~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~------------~~~~~~~h~~ 339 (410)
T 1vyh_C 274 --EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM------------CLMTLVGHDN 339 (410)
T ss_dssp --CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE------------EEEEEECCSS
T ss_pred --CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc------------eEEEEECCCC
Confidence 367777777775 3489999999999999998874 4778888988
Q ss_pred cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.|..+.+ +|++++|++|+.||.|++||+.+++++ ..+ .+|...|++++|+|++++|++
T Consensus 340 ~v~~v~~--~~~g~~l~s~s~D~~i~vwd~~~~~~~----~~~--~~h~~~v~~l~~~~~~~~l~s 397 (410)
T 1vyh_C 340 WVRGVLF--HSGGKFILSCADDKTLRVWDYKNKRCM----KTL--NAHEHFVTSLDFHKTAPYVVT 397 (410)
T ss_dssp CEEEEEE--CSSSSCEEEEETTTEEEEECCTTSCCC----EEE--ECCSSCEEEEEECSSSSCEEE
T ss_pred cEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCceE----EEE--cCCCCcEEEEEEcCCCCEEEE
Confidence 8877665 466999999999999999999887643 333 368889999999999999874
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5e-41 Score=266.81 Aligned_cols=231 Identities=17% Similarity=0.228 Sum_probs=190.5
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE------------------------------------
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR------------------------------------ 50 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~------------------------------------ 50 (291)
..|.+.|++++|+|++ ++|++|+.||+|++||..+++...
T Consensus 61 ~gH~~~V~~~~~s~d~----~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDK----RRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp ECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred cCCCCeEEEEEECCCC----CEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 3588999999999998 599999999999999987654332
Q ss_pred ------------EEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc--CCCE
Q psy10348 51 ------------HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL--LGTK 116 (291)
Q Consensus 51 ------------~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~ 116 (291)
.+.+|...|.+++|+| ++..|++++.|++|++||+++++.+..+ .+|...|.+++|+| ++++
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSF---HGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEE---ECCSSCEEEEEECCCSSCCE
T ss_pred ccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE---cCCCCCeEEEEEEeCCCCCE
Confidence 3445778888999999 8889999999999999999999998888 79999999999988 4689
Q ss_pred EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348 117 IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCI 194 (291)
Q Consensus 117 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i 194 (291)
|++|+.||.|++||+++++.+..+ .+|...|.+++|+ +++|++++.|++|
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~----------------------------~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAF----------------------------ETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEE----------------------------CCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEe----------------------------cCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 999999999999999988765443 3489999999998 7799999999999
Q ss_pred EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348 195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM 274 (291)
Q Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 274 (291)
++||++.... +..+..+........++++|++++|++|+.|+.|++||+.+++. .....+|.
T Consensus 265 ~lwd~~~~~~------------~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~------~~~l~~h~ 326 (354)
T 2pbi_B 265 RLYDLRADRE------------VAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR------VSILFGHE 326 (354)
T ss_dssp EEEETTTTEE------------EEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE------EEEECCCS
T ss_pred EEEECCCCcE------------EEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce------EEEEECCC
Confidence 9999987643 33333332212233455667799999999999999999988752 22334788
Q ss_pred cceeeeEEccCCceeeC
Q psy10348 275 SAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 275 ~~v~~~~~s~~g~~l~s 291 (291)
+.|++++|+|||++|++
T Consensus 327 ~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 327 NRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp SCEEEEEECTTSSCEEE
T ss_pred CcEEEEEECCCCCEEEE
Confidence 99999999999999875
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-41 Score=263.57 Aligned_cols=227 Identities=24% Similarity=0.305 Sum_probs=193.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 82 (291)
.|.+.|++++|+|++. .+|++|+.|++|++|++.. +.++..+.+|...|.+++|+| ++.+|++|+.|++|+
T Consensus 15 gH~~~V~~l~~~~~~~---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 15 GHNGWVTSLATSAGQP---NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLR 90 (319)
T ss_dssp CCSSCEEEEEECSSCT---TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred cccceEEEEEccCCCc---cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEE
Confidence 5899999999999753 5999999999999999864 345678899999999999999 999999999999999
Q ss_pred EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
+||+.+++.+..+ .+|...|.+++|+|++.+|++|+.|++|++||++... +.
T Consensus 91 ~wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-~~------------------------ 142 (319)
T 3frx_A 91 LWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LA------------------------ 142 (319)
T ss_dssp EEETTTTEEEEEE---ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-EE------------------------
T ss_pred EEECCCCCeeEEE---ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EE------------------------
Confidence 9999999998888 7999999999999999999999999999999986432 21
Q ss_pred cccccccccCcceeEEEEcC--------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348 163 PQFSTRDIHRNYVDCVRWLG--------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM 234 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~~--------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 234 (291)
...+|...|.++.|.+ ..+++++.|+.|++||++..+ ....+.+|...+..++++
T Consensus 143 ----~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~------------~~~~~~~h~~~v~~~~~s- 205 (319)
T 3frx_A 143 ----TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ------------IEADFIGHNSNINTLTAS- 205 (319)
T ss_dssp ----EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE------------EEEEECCCCSCEEEEEEC-
T ss_pred ----EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch------------hheeecCCCCcEEEEEEc-
Confidence 2235888899999962 379999999999999998763 367788898888876655
Q ss_pred cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|++++|++|+.||.|++||+.+++. ...+. +...|.+++|+|++.+|++
T Consensus 206 -p~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~---~~~~v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 206 -PDGTLIASAGKDGEIMLWNLAAKKA----MYTLS---AQDEVFSLAFSPNRYWLAA 254 (319)
T ss_dssp -TTSSEEEEEETTCEEEEEETTTTEE----EEEEE---CCSCEEEEEECSSSSEEEE
T ss_pred -CCCCEEEEEeCCCeEEEEECCCCcE----EEEec---CCCcEEEEEEcCCCCEEEE
Confidence 6699999999999999999998742 23333 3468999999999998874
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2e-41 Score=269.39 Aligned_cols=229 Identities=17% Similarity=0.223 Sum_probs=187.3
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE----EEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR----HFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 82 (291)
..|...|++++|+|++ .+++++.||+|+|||+.+++... ...+|...|.+++|+| ++++|++|+.|+.|+
T Consensus 91 ~~~~~~V~~~~~s~d~-----~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEK-----GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVK 164 (357)
T ss_dssp EECSSCEEEEEEETTT-----EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEE
T ss_pred CCCCCCEEEEEEcCCC-----CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEE
Confidence 4678899999999987 67778889999999998876432 3447999999999999 999999999999999
Q ss_pred EEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
+||+++++.+..+ .+|...|.+++|+|++. ++++++.|+.|++||+++++....+.
T Consensus 165 iwd~~~~~~~~~~---~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~-------------------- 221 (357)
T 4g56_B 165 VWDLSQKAVLKSY---NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID-------------------- 221 (357)
T ss_dssp EEETTTTEEEEEE---CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC--------------------
T ss_pred EEECCCCcEEEEE---cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee--------------------
Confidence 9999999999888 79999999999999875 78999999999999999887543322
Q ss_pred CcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348 162 FPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ 238 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (291)
...|...+.+++|+ +.+|++|+.|+.|++||+++.+. +..+..+...|..++|+ |++
T Consensus 222 ------~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~------------~~~~~~~~~~v~~l~~s--p~~ 281 (357)
T 4g56_B 222 ------FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS------------AQTSAVHSQNITGLAYS--YHS 281 (357)
T ss_dssp ------CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG------------CEEECCCSSCEEEEEEC--SSS
T ss_pred ------eccccccccchhhhhcccceEEEeecccceeEEECCCCcE------------eEEEeccceeEEEEEEc--CCC
Confidence 12367789999997 45899999999999999988754 67788888888877665 546
Q ss_pred -cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceeeC
Q psy10348 239 -KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLLC 291 (291)
Q Consensus 239 -~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~s 291 (291)
++||+|+.||+|+|||+.+++ .+...+|.+.|++++|+| |+++|++
T Consensus 282 ~~~lasgs~D~~i~iwd~~~~~-------~~~~~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 282 SPFLASISEDCTVAVLDADFSE-------VFRDLSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp SCCEEEEETTSCEEEECTTSCE-------EEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCc-------EeEECCCCCCEEEEEEeCCCCCEEEE
Confidence 689999999999999998873 223347889999999998 7888874
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.5e-41 Score=263.99 Aligned_cols=229 Identities=18% Similarity=0.233 Sum_probs=197.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ ++|++|+.||+|++||..+++.+..+..|...|.+++|+| ++.+|++|+.|+.|++|++.
T Consensus 53 gH~~~v~~~~~s~d~----~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 53 GHLAKIYAMHWGTDS----RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETT
T ss_pred CCCCceEEEEECCCC----CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECc
Confidence 578999999999998 5999999999999999999999999999999999999999 89999999999999999998
Q ss_pred Ccc----eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 88 TDI----CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 88 ~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
++. ....+ .+|...|.++.|++++. +++++.|+.|++||+++++....+
T Consensus 128 ~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~----------------------- 180 (340)
T 1got_B 128 TREGNVRVSREL---AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTF----------------------- 180 (340)
T ss_dssp TCSBSCEEEEEE---ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEE-----------------------
T ss_pred cCCCcceeEEEe---cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEE-----------------------
Confidence 653 23334 78999999999998774 899999999999999988765443
Q ss_pred ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
.+|...|.+++|+ ++++++|+.|+.|++||+++... +..+..|...|..++++ |++++|
T Consensus 181 -----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~------------~~~~~~h~~~v~~v~~~--p~~~~l 241 (340)
T 1got_B 181 -----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC------------RQTFTGHESDINAICFF--PNGNAF 241 (340)
T ss_dssp -----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE------------EEEECCCSSCEEEEEEC--TTSSEE
T ss_pred -----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee------------EEEEcCCcCCEEEEEEc--CCCCEE
Confidence 3488999999998 67999999999999999988744 77888888888876665 669999
Q ss_pred EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++|+.||+|++||+++++ ....+.+..+...|.+++|+|+|++|++
T Consensus 242 ~s~s~d~~v~iwd~~~~~----~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 287 (340)
T 1got_B 242 ATGSDDATCRLFDLRADQ----ELMTYSHDNIICGITSVSFSKSGRLLLA 287 (340)
T ss_dssp EEEETTSCEEEEETTTTE----EEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EEEcCCCcEEEEECCCCc----EEEEEccCCcccceEEEEECCCCCEEEE
Confidence 999999999999999874 2234444455568999999999999874
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-40 Score=258.96 Aligned_cols=243 Identities=17% Similarity=0.193 Sum_probs=194.6
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC--cceeEEEeeeccceeEEEEecC-CCcEEEEeecCCeEEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF--HACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRL 83 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~v 83 (291)
..|.+.|++++|+|++ ++||+|+.|++|+|||+++ .+.+..+.+|.++|.+++|++. ++++|++|+.|++|++
T Consensus 6 ~~h~~~V~~~~~s~~g----~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYG----KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CSCSSCEEEEEECTTS----SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred cCCcCceEEEEECCCC----CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 3689999999999998 5999999999999999974 4678899999999999999862 3789999999999999
Q ss_pred EECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348 84 WNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK 159 (291)
Q Consensus 84 wd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
||+++++ .+..+ ..|...|.+++|+|+ +.+|++++.|+.|++||++++....
T Consensus 82 Wd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~--------------------- 137 (297)
T 2pm7_B 82 WKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS--------------------- 137 (297)
T ss_dssp EEBSSSCBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---------------------
T ss_pred EEcCCCceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---------------------
Confidence 9998774 34444 689999999999997 8899999999999999998753210
Q ss_pred ccCcccccccccCcceeEEEEcC---------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348 160 EHFPQFSTRDIHRNYVDCVRWLG---------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD 224 (291)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
.....+|...|.+++|++ ++|++|+.|++|++||++..... ......+.+|.
T Consensus 138 -----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~--------~~~~~~l~~H~ 204 (297)
T 2pm7_B 138 -----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------YVLESTLEGHS 204 (297)
T ss_dssp -----CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE--------EEEEEEECCCS
T ss_pred -----eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce--------EEEEEEecCCC
Confidence 011245888899999973 48999999999999998765421 02356788899
Q ss_pred ccEEEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 225 CEIWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 225 ~~i~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
..|..++|+++. .+.+|++|+.|++|++||+.+.... .....+....|...|.+++|+|+|++||+
T Consensus 205 ~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~las 271 (297)
T 2pm7_B 205 DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP-WKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (297)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-CEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc-cceeeeecccCCCcEEEEEECCCCCEEEE
Confidence 988887776431 1489999999999999999875321 11123323467789999999999999874
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-40 Score=262.20 Aligned_cols=227 Identities=20% Similarity=0.274 Sum_probs=192.3
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
.|...|.+++|+|++ .+|++|+.|+.|++|++.++ +....+.+|.+.|.++.|++ ++ .+++++.|+.|++
T Consensus 95 ~~~~~v~~~~~s~~~----~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~ 168 (340)
T 1got_B 95 LRSSWVMTCAYAPSG----NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCAL 168 (340)
T ss_dssp CSSSCEEEEEECTTS----SEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEE
T ss_pred cCCccEEEEEECCCC----CEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEE
Confidence 467889999999998 49999999999999999865 35567789999999999998 65 4899999999999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
||+++++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||++++.....+
T Consensus 169 wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~----------------------- 222 (340)
T 1got_B 169 WDIETGQQTTTF---TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF----------------------- 222 (340)
T ss_dssp EETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-----------------------
T ss_pred EECCCCcEEEEE---cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE-----------------------
Confidence 999999988888 789999999999999999999999999999999987755443
Q ss_pred ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC--cccEEEEEEEecCCCc
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK--DCEIWFIRFSMDYWQK 239 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~ 239 (291)
.+|...|.+++|+ +++|++++.|++|++||++..+. +..+..+ ...+.. ++++|+++
T Consensus 223 -----~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~------------~~~~~~~~~~~~v~~--~~~s~~g~ 283 (340)
T 1got_B 223 -----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE------------LMTYSHDNIICGITS--VSFSKSGR 283 (340)
T ss_dssp -----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------EEEECCTTCCSCEEE--EEECTTSS
T ss_pred -----cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE------------EEEEccCCcccceEE--EEECCCCC
Confidence 3488999999998 77999999999999999987643 3333322 234554 45567799
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+|++|+.||.|++||+.+++. ... ..+|.++|.+++|+|+|++|++
T Consensus 284 ~l~~g~~d~~i~vwd~~~~~~----~~~--~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 284 LLLAGYDDFNCNVWDALKADR----AGV--LAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp EEEEEETTSEEEEEETTTCCE----EEE--EECCSSCEEEEEECTTSSCEEE
T ss_pred EEEEECCCCeEEEEEcccCcE----eeE--eecCCCcEEEEEEcCCCCEEEE
Confidence 999999999999999988752 233 3478899999999999999875
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.9e-40 Score=258.33 Aligned_cols=258 Identities=19% Similarity=0.322 Sum_probs=205.9
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ ++|++|+.||.|++|+..+++....+.+|...|.+++|+| ++++|++|+.|+.|++||++
T Consensus 21 gh~~~v~~~~~s~~~----~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 21 GHTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred ccCCcEEEEEECCCC----CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECC
Confidence 578999999999998 5999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc------ccccCCCCccccccCcccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE------SYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 161 (291)
+++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+++++....+.. .+.+.|++...........
T Consensus 96 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 96 SGKCLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 172 (312)
T ss_dssp TCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCcEEEEE---cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 99988888 78999999999999999999999999999999998877655542 3445555443322221111
Q ss_pred Cc---------ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348 162 FP---------QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI 230 (291)
Q Consensus 162 ~~---------~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (291)
.. .......+...+..++|+ +++|++++.|+.|++||+++.+. +..+..+......+
T Consensus 173 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 173 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC------------LKTYTGHKNEKYCI 240 (312)
T ss_dssp EEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE------------EEEECSSCCSSSCC
T ss_pred EEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE------------EEEEEecCCceEEE
Confidence 10 111123456778889998 77999999999999999987743 56666665443333
Q ss_pred EEEe-cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 231 RFSM-DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 231 ~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
...+ .+++.+|++|+.||.|++||+.+++. .....+|...|.+++|+|++++|++
T Consensus 241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~------~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEI------VQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp CEEEECSSSCEEEECCTTSCEEEEETTTCCE------EEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEECCCchh------hhhhhccCCcEEEEeecCcCCceEE
Confidence 2222 25689999999999999999998742 2233478899999999999999874
No 16
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-40 Score=259.98 Aligned_cols=244 Identities=18% Similarity=0.206 Sum_probs=186.6
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecC-CCcEEEEeecCCeE
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTL 81 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i 81 (291)
....|.+.|++++|+|++ ++||+|+.|++|+|||+++++ .+..+.+|.++|.+++|++. ++.+|++|+.|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g----~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYG----TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ------CCEEEEEECGGG----CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred ecccccCeEEEeeEcCCC----CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 344789999999999998 599999999999999998764 46788999999999999862 47899999999999
Q ss_pred EEEECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 82 RLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 82 ~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
++||+++++ ....+ .+|...|.+++|+|+ +.+|++|+.|+.|++||++.+.....
T Consensus 84 ~iWd~~~~~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~------------------ 142 (316)
T 3bg1_A 84 IIWREENGTWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV------------------ 142 (316)
T ss_dssp EEECCSSSCCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE------------------
T ss_pred EEEECCCCcceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce------------------
Confidence 999998874 44455 689999999999998 78999999999999999986531100
Q ss_pred ccccCcccccccccCcceeEEEEcC-------------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeee
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWLG-------------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIIN 218 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~~-------------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 218 (291)
.....+|...|.+++|++ .+|++|+.|++|++||++..... ..+.
T Consensus 143 -------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~---------~~~~ 206 (316)
T 3bg1_A 143 -------KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW---------KEEQ 206 (316)
T ss_dssp -------CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE---------EEEE
T ss_pred -------eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc---------ceee
Confidence 011124666777777762 58999999999999998654221 2366
Q ss_pred eecCCcccEEEEEEEecC--CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 219 RLNFKDCEIWFIRFSMDY--WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 219 ~~~~~~~~i~~~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.+.+|...|..++|+++. ++.+|++|+.||+|++|++.+..........+. .|...|.+++|+|+|++||+
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las 279 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAV 279 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEE
T ss_pred ecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEE
Confidence 788898888877666431 138999999999999999987421111112222 46789999999999999874
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-39 Score=275.80 Aligned_cols=270 Identities=16% Similarity=0.204 Sum_probs=201.2
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++. ..|++|+.|++|++||..+++.+..+.+|...|.+++|+| ++++|++|+.|++|++||+.
T Consensus 145 gh~~~v~~v~f~p~~~---~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRP---FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp CCSSCEEEEEECSSSS---CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred CCCCCceEEEECCCCC---eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECC
Confidence 5788999999999974 4699999999999999999999999999999999999999 89999999999999999999
Q ss_pred Ccceeeeecc----ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc---------cccC-------
Q psy10348 88 TDICIAIFGG----VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES---------YTFN------- 147 (291)
Q Consensus 88 ~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---------~~~~------- 147 (291)
+++.+..+.. ..+|...|.+++|+|++++|++++.|++|++||+++++....+... ..+.
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 9988777621 1179999999999999999999999999999999988766554321 0010
Q ss_pred -CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc--CCCceee------
Q psy10348 148 -PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT--NETNVTI------ 216 (291)
Q Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~------ 216 (291)
.++....+.... ........+|...|.+++|+ +++|++++.|++|++||+.++....... +......
T Consensus 301 s~d~~i~~~~~~~--~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 301 SANGFINFVNPEL--GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp ETTCCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred eCCCcEEEEeCCC--CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 001111111110 01223456799999999998 7899999999999999998765432110 0000000
Q ss_pred ---------------------------------------------------------------eeeecCCcccEEEEEEE
Q psy10348 217 ---------------------------------------------------------------INRLNFKDCEIWFIRFS 233 (291)
Q Consensus 217 ---------------------------------------------------------------~~~~~~~~~~i~~~~~~ 233 (291)
+..+. +...+. +++
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~-~~~~v~--~va 455 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP-ISYNSS--CVA 455 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE-CSSCEE--EEE
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee-cCCCce--EEE
Confidence 00000 112233 456
Q ss_pred ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 234 MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++|||++||+|+.|++|++||+.++.. ..... .+|...|++++|+|||++|++
T Consensus 456 ~spdg~~lasgs~D~~v~lwd~~~~~~----~~~~~-~~h~~~v~~v~fspdg~~las 508 (611)
T 1nr0_A 456 LSNDKQFVAVGGQDSKVHVYKLSGASV----SEVKT-IVHPAEITSVAFSNNGAFLVA 508 (611)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEETTEE----EEEEE-EECSSCEEEEEECTTSSEEEE
T ss_pred EeCCCCEEEEeCCCCeEEEEEccCCce----eeeec-cCCCCceEEEEECCCCCEEEE
Confidence 678899999999999999999987531 11112 468889999999999999974
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-39 Score=260.43 Aligned_cols=242 Identities=19% Similarity=0.273 Sum_probs=192.3
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC 91 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 91 (291)
.|++++|+|++ ++|++|+.||.|++||+++++.+..+.+|...|.+++|+| ++.+|++++.|++|++||+++++.
T Consensus 125 ~v~~v~~s~dg----~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 125 YIRSVCFSPDG----KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp BEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCC----CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCee
Confidence 59999999998 5999999999999999999999999999999999999999 889999999999999999999988
Q ss_pred eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 92 IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 92 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
...+ .+...+.+++|+| ++++|++|+.|+.|++||+++++.+..+... .....+
T Consensus 200 ~~~~----~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~---------------------~~~~~~ 254 (393)
T 1erj_A 200 SLTL----SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE---------------------NESGTG 254 (393)
T ss_dssp EEEE----ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------------------------CC
T ss_pred EEEE----EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc---------------------ccCCCC
Confidence 7776 4667899999999 8999999999999999999988755443210 011135
Q ss_pred cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348 171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248 (291)
Q Consensus 171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 248 (291)
|...|.+++|+ +++|++++.|+.|++||++...................+.+|...+..+++. |++.+|++|+.||
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~sgs~D~ 332 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT--QNDEYILSGSKDR 332 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC--GGGCEEEEEETTS
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC--CCCCEEEEEeCCC
Confidence 88999999998 7799999999999999998754322111112223456677888877766555 6699999999999
Q ss_pred cEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc------CCceeeC
Q psy10348 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK------NGNVLLC 291 (291)
Q Consensus 249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~g~~l~s 291 (291)
.|++||+.++++ ... ..+|...|.+++|++ ++++|++
T Consensus 333 ~v~iwd~~~~~~----~~~--l~~h~~~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 333 GVLFWDKKSGNP----LLM--LQGHRNSVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp EEEEEETTTCCE----EEE--EECCSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred eEEEEECCCCeE----EEE--ECCCCCCEEEEEecCCcCcCCCCCEEEE
Confidence 999999998852 223 347889999999986 6777764
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=255.26 Aligned_cols=251 Identities=17% Similarity=0.188 Sum_probs=194.2
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.|.+.|.+++|+|++ ++|++|+.|+.|++|+..++ +.+..+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 59 ~h~~~v~~~~~sp~g----~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCG----NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWE 133 (345)
T ss_dssp SCSSCEEEEEECTTS----SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred ccCCcEEEEEECCCC----CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEE
Confidence 478999999999998 49999999999999998876 45778899999999999999 899999999999999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.++.....+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++... .
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~--------------------------~ 187 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC--------------------------C 187 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE--------------------------E
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE--------------------------E
Confidence 98765433333337899999999999999999999999999999988764221 1
Q ss_pred ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc---ccCCCceeeeeeecC-CcccEEEEEEEecCCCc
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL---RTNETNVTIINRLNF-KDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 239 (291)
..+.+|...|.+++|+ +++|++++.|++|++||......... .........+..+.+ |...|+.++++ |++.
T Consensus 188 ~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~~ 265 (345)
T 3fm0_A 188 ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC--QLTG 265 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC--TTTC
T ss_pred EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe--cCCC
Confidence 1234599999999998 77999999999999999643322100 001111233444444 66677766554 6699
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeE---EEeccccccceeeeEEccCCc-eeeC
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQ---ILSHPRCMSAVRQTTLSKNGN-VLLC 291 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~g~-~l~s 291 (291)
.|++++.|+.|++|+............ .....+|...|++++|+|++. +||+
T Consensus 266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 999999999999999987643222111 122357899999999999985 6764
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=256.91 Aligned_cols=239 Identities=20% Similarity=0.305 Sum_probs=190.7
Q ss_pred eecc-eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--E-EeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 8 LIEE-NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--H-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 8 ~~~~-~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
.|.+ .|++++|+|++ ++||+|+.|++|+|||+++++... . ..+|...|.+++|+| ++++|++|+.|+.|++
T Consensus 13 ~h~~~~v~~l~~sp~g----~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAG----TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCI 87 (345)
T ss_dssp CSTTSCEEEEEECTTS----SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred CCCCCcEEEEEECCCC----CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEE
Confidence 3555 89999999998 499999999999999998776432 2 257999999999999 9999999999999999
Q ss_pred EECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 84 WNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 84 wd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
||+..+. .+..+ .+|...|.+++|+|++++|++++.|+.|++||++++.....
T Consensus 88 w~~~~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~---------------------- 142 (345)
T 3fm0_A 88 WKKNQDDFECVTTL---EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC---------------------- 142 (345)
T ss_dssp EEECCC-EEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE----------------------
T ss_pred EEccCCCeEEEEEc---cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE----------------------
Confidence 9988664 44555 79999999999999999999999999999999987542111
Q ss_pred CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
.....+|...|.+++|+ +++|++++.|+.|++||.+.... .....+.+|...|..++|+ |+++
T Consensus 143 ---~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~----------~~~~~~~~h~~~v~~l~~s--p~g~ 207 (345)
T 3fm0_A 143 ---VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW----------VCCATLEGHESTVWSLAFD--PSGQ 207 (345)
T ss_dssp ---EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE----------EEEEEECCCSSCEEEEEEC--TTSS
T ss_pred ---EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE----------EEEEEecCCCCceEEEEEC--CCCC
Confidence 12234588999999998 77999999999999999876532 3356788888888876665 6699
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcce---------eEEEecc-ccccceeeeEEccCCceeeC
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIK---------FQILSHP-RCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~---------~~~~~~~-~~~~~v~~~~~s~~g~~l~s 291 (291)
+|++|+.||+|++|+.......... ....... .|...|.+++|+|++..|++
T Consensus 208 ~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 269 (345)
T 3fm0_A 208 RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT 269 (345)
T ss_dssp EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE
T ss_pred EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE
Confidence 9999999999999997543221110 0111112 37789999999999998874
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.7e-39 Score=255.23 Aligned_cols=232 Identities=19% Similarity=0.328 Sum_probs=187.2
Q ss_pred eecceeEEEEeeecc--CCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348 8 LIEENFYTCAWSMDL--ESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~--~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 78 (291)
.|.+.|++++|.+.. .+++++|++|+.|++|++||+.++ .....+.+|...|.+++|+| ++.++++|+.|
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D 97 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWD 97 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETT
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCC
Confidence 588999999993221 113479999999999999998743 45677889999999999999 88999999999
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
++|++||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+........
T Consensus 98 ~~v~lwd~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~------------------- 155 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRF---VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSS------------------- 155 (343)
T ss_dssp SEEEEEETTSSCEEEEE---ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEEC-------------------
T ss_pred CcEEEEECCCCcEEEEE---cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeee-------------------
Confidence 99999999999988888 79999999999999999999999999999999874321110
Q ss_pred cccCcccccccccCcceeEEEEc--C----------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348 159 KEHFPQFSTRDIHRNYVDCVRWL--G----------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE 226 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~--~----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
.....|...|.+++|+ + .++++++.|+.|++||... .....+..|...
T Consensus 156 -------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------------~~~~~~~~h~~~ 215 (343)
T 2xzm_R 156 -------AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-------------QIRYTFKAHESN 215 (343)
T ss_dssp -------CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-------------EEEEEEECCSSC
T ss_pred -------ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-------------ceeEEEcCcccc
Confidence 0112488889999997 2 5899999999999999432 335677788888
Q ss_pred EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+..+++ +|++++|++|+.||.|++||+...... ...+. +...|.+++|+|++++|+
T Consensus 216 v~~~~~--s~~g~~l~sgs~dg~v~iwd~~~~~~~---~~~~~---~~~~v~~v~~sp~~~~la 271 (343)
T 2xzm_R 216 VNHLSI--SPNGKYIATGGKDKKLLIWDILNLTYP---QREFD---AGSTINQIAFNPKLQWVA 271 (343)
T ss_dssp EEEEEE--CTTSSEEEEEETTCEEEEEESSCCSSC---SEEEE---CSSCEEEEEECSSSCEEE
T ss_pred ceEEEE--CCCCCEEEEEcCCCeEEEEECCCCccc---ceeec---CCCcEEEEEECCCCCEEE
Confidence 877655 467999999999999999999654321 12222 335799999999999876
No 22
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=257.82 Aligned_cols=229 Identities=17% Similarity=0.195 Sum_probs=176.8
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-----------cceeEEEeeeccceeEEEEecCCCcEEEEe
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-----------HACVRHFYGHGHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 75 (291)
..++..|.+++|+||+ .+|++++ |+++++||... .........|...|.+++|+| + ..|++|
T Consensus 27 ~~~~~~v~~~~fs~dG----~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~~~ 99 (344)
T 4gqb_B 27 ACMERQLEAARYRSDG----ALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGILVA 99 (344)
T ss_dssp SSCCSEEEEEEECTTS----CEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEEEE
T ss_pred ccccCCEEEEEECCCC----CEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEEEE
Confidence 3467889999999999 4888776 67788887321 112223345778899999999 6 478899
Q ss_pred ecCCeEEEEECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348 76 SKDHTLRLWNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP 154 (291)
Q Consensus 76 ~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (291)
+.||+|+|||+.+++.+..+. .+.+|...|++++|+|++++|++|+.|++|++||+++++.+..+
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~-------------- 165 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY-------------- 165 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE--------------
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE--------------
Confidence 999999999999887655432 12589999999999999999999999999999999998866544
Q ss_pred ccCccccCcccccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--CcccEEE
Q psy10348 155 FDTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--KDCEIWF 229 (291)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ 229 (291)
.+|...|.+++|+ + .+|++++.|++|++||+++.+. ...+.. +...+..
T Consensus 166 --------------~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~------------~~~~~~~~~~~~~~~ 219 (344)
T 4gqb_B 166 --------------RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP------------ASQIGCSAPGYLPTS 219 (344)
T ss_dssp --------------CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC------------EEECC----CCCEEE
T ss_pred --------------cCcCCceEEEEecCCCCCceeeeccccccccccccccce------------eeeeecceeecccee
Confidence 3599999999998 3 4789999999999999998765 344432 3333444
Q ss_pred EEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348 230 IRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL 290 (291)
Q Consensus 230 ~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 290 (291)
++++| ++++|++|+.||.|++||+++++++ ..+ .+|...|++++|+|+|. +|+
T Consensus 220 --~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~--~~h~~~v~~v~fsp~g~~~la 274 (344)
T 4gqb_B 220 --LAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSS--AVHSQCVTGLVFSPHSVPFLA 274 (344)
T ss_dssp --EEECSSCTTEEEEEETTSEEEEEESCC--CC----EEE--ECCSSCEEEEEECSSSSCCEE
T ss_pred --eeecCCCCcceEEeccCCcEEEEECCCCcEE----EEE--cCCCCCEEEEEEccCCCeEEE
Confidence 44555 4678999999999999999988643 333 37889999999999984 565
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.6e-39 Score=257.32 Aligned_cols=240 Identities=17% Similarity=0.235 Sum_probs=187.9
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc------------------ceeEEEEecCC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH------------------AINELKFHPQD 68 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~ 68 (291)
+.|...|++++|+|++ ++||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+| +
T Consensus 61 ~~h~~~V~~v~fspdg----~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-d 134 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDG----EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-D 134 (393)
T ss_dssp EECSSCCCEEEECTTS----SEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-T
T ss_pred cCCCCEEEEEEECCCC----CEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-C
Confidence 4589999999999998 4999876 68999999999998887765532 489999999 9
Q ss_pred CcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 69 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
+++|++|+.|+.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.|++|++||+++++....+.
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~------- 204 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKIVMIL---QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS------- 204 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEE---ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-------
Confidence 999999999999999999999888887 7999999999999999999999999999999999887554432
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC 225 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
+...+.+++|+ +++|++++.|+.|++||++++....... .......+|..
T Consensus 205 ----------------------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~h~~ 257 (393)
T 1erj_A 205 ----------------------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD-----SENESGTGHKD 257 (393)
T ss_dssp ----------------------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-----------CCCSS
T ss_pred ----------------------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeec-----ccccCCCCCCC
Confidence 55668899997 6799999999999999998875421000 00011246777
Q ss_pred cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcc------eeEEEeccccccceeeeEEccCCceeeC
Q psy10348 226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSI------KFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~------~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.|..++|+ |++++|++|+.||.|++||+.+...... ........+|...|.+++|+|++++|++
T Consensus 258 ~v~~v~~~--~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 327 (393)
T 1erj_A 258 SVYSVVFT--RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS 327 (393)
T ss_dssp CEEEEEEC--TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEE
T ss_pred CEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEE
Confidence 77766554 6699999999999999999987542111 0112233478889999999999999874
No 24
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.1e-38 Score=246.69 Aligned_cols=227 Identities=20% Similarity=0.302 Sum_probs=189.1
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...|.+++|+|++ .+|++|+.|++|++||+++++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||++
T Consensus 63 ~h~~~v~~~~~s~dg----~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 63 GHSHIVQDCTLTADG----AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT
T ss_pred CCcccEEEEEECCCC----CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 578999999999998 5999999999999999999999999999999999999999 89999999999999999997
Q ss_pred CcceeeeeccccCCCCceEEEEEccC------CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLL------GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
++.+..+ .+|...|.++.|+|. +..|++++.|+.|++||+++.+....+
T Consensus 138 -~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~--------------------- 192 (319)
T 3frx_A 138 -GQCLATL---LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF--------------------- 192 (319)
T ss_dssp -SCEEEEE---CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE---------------------
T ss_pred -CCeEEEE---eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee---------------------
Confidence 5566666 689999999999985 448999999999999999887654333
Q ss_pred CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
.+|...|.+++|+ +++|++++.|+.|++||+.+.+. +..+..+ ..+.. ++++|++.
T Consensus 193 -------~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~-~~v~~--~~~sp~~~ 250 (319)
T 3frx_A 193 -------IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA------------MYTLSAQ-DEVFS--LAFSPNRY 250 (319)
T ss_dssp -------CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE------------EEEEECC-SCEEE--EEECSSSS
T ss_pred -------cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE------------EEEecCC-CcEEE--EEEcCCCC
Confidence 3589999999998 77999999999999999988743 5555544 34554 45567799
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeEEEe------ccccccceeeeEEccCCceeeC
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILS------HPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+|++++.+ .+++|++..... ...+. ...+...+.+++|+|||++|++
T Consensus 251 ~la~~~~~-~i~v~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 251 WLAAATAT-GIKVFSLDPQYL----VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp EEEEEETT-EEEEEEETTEEE----EEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred EEEEEcCC-CcEEEEeCcCee----eeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 99998865 499999987532 12221 1235567999999999999974
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-39 Score=261.07 Aligned_cols=239 Identities=14% Similarity=0.218 Sum_probs=195.1
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ ++|++|+.||+|+|||+.+++....+..|...|.+++|+| ++++|++|+.|+.+++||+.
T Consensus 64 gH~~~V~~~~~sp~~----~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEK----NWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp CCSSCEEEEEECTTS----SCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEECC
T ss_pred ccccEEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEECC
Confidence 588999999999998 4999999999999999999999999999999999999999 99999999999999999987
Q ss_pred Ccce----eeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 88 TDIC----IAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 88 ~~~~----~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
+... ......+.+|...|.++.|.|++ ..|++|+.|++|++||+++++.+..+..
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-------------------- 198 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS-------------------- 198 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC--------------------
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec--------------------
Confidence 5321 11112237999999999999974 5799999999999999998876543321
Q ss_pred cccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 163 PQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
....+|...|.++.|+ +++|++|+.|++|++||++.... .+..+.+|...|..++|+ |+++
T Consensus 199 ---~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-----------~~~~~~~h~~~v~~v~~~--p~~~ 262 (380)
T 3iz6_a 199 ---EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR-----------AVRTYHGHEGDINSVKFF--PDGQ 262 (380)
T ss_dssp ---CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-----------CCEEECCCSSCCCEEEEC--TTSS
T ss_pred ---ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-----------ceEEECCcCCCeEEEEEe--cCCC
Confidence 0113488899999996 67999999999999999975432 267788898888877665 6699
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-----ccccceeeeEEccCCceeeC
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-----RCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~g~~l~s 291 (291)
+|++|+.||+|++||+++++.+ ..+... .+...|++++|+|+|++|++
T Consensus 263 ~l~s~s~D~~i~lwd~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 263 RFGTGSDDGTCRLFDMRTGHQL----QVYNREPDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp EEEEECSSSCEEEEETTTTEEE----EEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred eEEEEcCCCeEEEEECCCCcEE----EEecccccccccccCceEEEEECCCCCEEEE
Confidence 9999999999999999987532 233211 12235899999999999874
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-38 Score=249.00 Aligned_cols=236 Identities=22% Similarity=0.318 Sum_probs=181.6
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEE-ee-eccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHF-YG-HGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
.|.++|++++|+|+ +||+|+.|++|++||+.++ +.+..+ .+ |...|.+++|+| ++.+|++|+.|++|++
T Consensus 12 ~h~~~v~~~~~s~~------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~i 84 (330)
T 2hes_X 12 LYKEKIWSFDFSQG------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSI 84 (330)
T ss_dssp CCSSCEEEEEEETT------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred cCCCceeeeccCCC------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEE
Confidence 58899999999875 8999999999999999875 445555 34 999999999999 8999999999999999
Q ss_pred EECCCc-------ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348 84 WNIKTD-------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD 156 (291)
Q Consensus 84 wd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
||+... +.+..+ .+|...|.+++|+|++++|++|+.|++|++||++......
T Consensus 85 w~~~~~~~~~~~~~~~~~~---~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~------------------ 143 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAII---EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY------------------ 143 (330)
T ss_dssp EEC-------CCCEEEEEE---C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC------------------
T ss_pred EEcccCcCccccceeEEEE---cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe------------------
Confidence 998532 344455 7999999999999999999999999999999995432100
Q ss_pred CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348 157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM 234 (291)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 234 (291)
.....+.+|...|.+++|+ +++|++++.|++|++||...... ..+..+.+|...|+.+++++
T Consensus 144 ------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~----------~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 144 ------ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW----------ECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp ------EEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE----------EEEEEECCCSSCEEEEEECC
T ss_pred ------EEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe----------eEEEEccCCCCcEEEEEecC
Confidence 0112234589999999998 77999999999999999865422 34778889999998887775
Q ss_pred cCCCcEEEEEcCCCcEEEEEcCCCCCCcce--eEEEecc-ccccceeeeEEccCCc
Q psy10348 235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIK--FQILSHP-RCMSAVRQTTLSKNGN 287 (291)
Q Consensus 235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~~-~~~~~v~~~~~s~~g~ 287 (291)
+.++.+|++|+.|++|++||+..+...... ....... .|...|.+++|++++.
T Consensus 208 ~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~ 263 (330)
T 2hes_X 208 TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL 263 (330)
T ss_dssp SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSC
T ss_pred CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCE
Confidence 544789999999999999999765321111 1112222 3888999999998763
No 27
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-40 Score=262.99 Aligned_cols=250 Identities=8% Similarity=0.043 Sum_probs=190.1
Q ss_pred eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc--ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
++...+.++|++++|+|++ ++||+|+.||.|++||+.++ +.+..+.+|...|.+++|+| ++++|++++.|+.|
T Consensus 5 ~~~~~~~~~v~~~~~s~~g----~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v 79 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQR----TEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNA 79 (377)
T ss_dssp EEEEECSSCCSCCEECSSS----SEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSE
T ss_pred eeEecCCCcEEEEEECCCC----CEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeE
Confidence 3344567899999999998 49999999999999999988 77888899999999999999 88999999999999
Q ss_pred EEEECCCcc---eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 82 RLWNIKTDI---CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 82 ~vwd~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
++||+.+++ ....+ ..|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus 80 ~vwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~------------------- 137 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVL---LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV------------------- 137 (377)
T ss_dssp EEC------CCCCEEEC---CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC-------------------
T ss_pred EEEEcCCCCceeeeeEe---cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee-------------------
Confidence 999999877 44444 68999999999999999999999999999999988763111
Q ss_pred cccCcccccccc-cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccccc---CC---CceeeeeeecCCcccEEE
Q psy10348 159 KEHFPQFSTRDI-HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRT---NE---TNVTIINRLNFKDCEIWF 229 (291)
Q Consensus 159 ~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~i~~ 229 (291)
...... |...|.+++|+ +++|++++.|+.|++||++......... .. .....+..+ .|...+..
T Consensus 138 ------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 210 (377)
T 3dwl_C 138 ------SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHA 210 (377)
T ss_dssp ------CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEE
T ss_pred ------eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEE
Confidence 111123 88999999998 6799999999999999986543211000 00 113445666 78888877
Q ss_pred EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++ |++++|++++.||.|++||+.+++....... ...+|..+|.+++|+|+|++|++
T Consensus 211 ~~~s--p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~ 268 (377)
T 3dwl_C 211 VGFS--PSGNALAYAGHDSSVTIAYPSAPEQPPRALI--TVKLSQLPLRSLLWANESAIVAA 268 (377)
T ss_dssp EEEC--TTSSCEEEEETTTEEC-CEECSTTSCEEECC--CEECSSSCEEEEEEEETTEEEEE
T ss_pred EEEC--CCCCEEEEEeCCCcEEEEECCCCCCcceeeE--eecCCCCceEEEEEcCCCCEEEE
Confidence 6655 6699999999999999999999875211112 23367889999999999999874
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=250.52 Aligned_cols=239 Identities=13% Similarity=0.197 Sum_probs=178.7
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-------cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-------HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
|.+.|++++|+|++ .+|++|+.|++|+|||++. .+.+..+.+|...|.+++|+| ++++|++|+.|++|
T Consensus 57 h~~~v~~v~~sp~~----~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v 131 (330)
T 2hes_X 57 HKKAIRSVAWRPHT----SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSV 131 (330)
T ss_dssp CCSCEEEEEECTTS----SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCE
T ss_pred ccCCEEEEEECCCC----CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEE
Confidence 88899999999998 4999999999999999853 356778889999999999999 89999999999999
Q ss_pred EEEECCCc----ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 82 RLWNIKTD----ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 82 ~vwd~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
++||+... +.+..+ .+|...|.+++|+|++.+|++++.|++|++||+.++...
T Consensus 132 ~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~-------------------- 188 (330)
T 2hes_X 132 WIWETDESGEEYECISVL---QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE-------------------- 188 (330)
T ss_dssp EEEECCTTCCCCEEEEEE---CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE--------------------
T ss_pred EEEeccCCCCCeEEEEEe---ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee--------------------
Confidence 99999432 344455 789999999999999999999999999999998765210
Q ss_pred ccccCcccccccccCcceeEEEEcC----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEE
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWLG----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRF 232 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 232 (291)
....+.+|...|.+++|++ .+|++++.|++|++||++...... .........+.. |...|..+++
T Consensus 189 ------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~v~~ 258 (330)
T 2hes_X 189 ------CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD----QQEWVCEAILPDVHKRQVYNVAW 258 (330)
T ss_dssp ------EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS----CEEEEEEEECCSCCSSCEEEEEE
T ss_pred ------EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc----cceeEEeeecccccccceEEEEE
Confidence 1122346999999999983 379999999999999986542210 000122344444 7778887777
Q ss_pred EecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccccc-ceeeeEEcc--CCceeeC
Q psy10348 233 SMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS-AVRQTTLSK--NGNVLLC 291 (291)
Q Consensus 233 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~g~~l~s 291 (291)
+ + +.+|++++.||.|++||..+++. ........+|.. .|++++|+| ++++||+
T Consensus 259 s--~-~~~l~s~~~dg~v~iw~~~~~~~---~~~~~~~~~h~~~~v~~v~~~~~~~~~~las 314 (330)
T 2hes_X 259 G--F-NGLIASVGADGVLAVYEEVDGEW---KVFAKRALCHGVYEINVVKWLELNGKTILAT 314 (330)
T ss_dssp C--T-TSCEEEEETTSCEEEEEEETTEE---EEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred c--C-CCEEEEEeCCCEEEEEEcCCCce---EEEeccccccccceEEEEEEecCCCceEEEE
Confidence 6 4 45899999999999999876531 111112236766 899999999 6888874
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.6e-38 Score=252.60 Aligned_cols=234 Identities=18% Similarity=0.219 Sum_probs=175.7
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecC------CCeEEEEccCCcce----eEEEeeeccceeEEEEecCCCcEEEE
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGS------RAVIRIFSPAFHAC----VRHFYGHGHAINELKFHPQDFNLLLS 74 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~------dg~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s 74 (291)
....|++.|++++||||+ ++||+|+. |+.|++|+..++.. .....+|...|.+++|+| ++. +++
T Consensus 37 ~p~~H~~~V~~v~fSpDG----~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-d~~-~l~ 110 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDG----ALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVS-EKG-ILV 110 (357)
T ss_dssp ---CCCSEEEEEEECSSS----CEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEET-TTE-EEE
T ss_pred CcccccCCEEEEEECCCC----CEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcC-CCC-EEE
Confidence 344689999999999999 59999987 78899999877643 344567889999999999 765 556
Q ss_pred eecCCeEEEEECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccc
Q psy10348 75 VSKDHTLRLWNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR 153 (291)
Q Consensus 75 ~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 153 (291)
++.||+|+|||+.+++...... ...+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+
T Consensus 111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~------------- 177 (357)
T 4g56_B 111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY------------- 177 (357)
T ss_dssp EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-------------
T ss_pred EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------
Confidence 7889999999999876543321 12479999999999999999999999999999999988765544
Q ss_pred cccCccccCcccccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348 154 PFDTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI 230 (291)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (291)
.+|...|.+++|+ + .++++++.|++|++||+++.+.. .......+...+..+
T Consensus 178 ---------------~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~----------~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 178 ---------------NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA----------TRIDFCASDTIPTSV 232 (357)
T ss_dssp ---------------CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB----------CBCCCTTCCSCEEEE
T ss_pred ---------------cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee----------eeeeeccccccccch
Confidence 3489999999997 3 48999999999999999887652 112223344455555
Q ss_pred EEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348 231 RFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL 290 (291)
Q Consensus 231 ~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 290 (291)
+ ++|+ +.+|++|+.|+.|++||+++++.+ ..+ .+|...|++++|+|++. +||
T Consensus 233 ~--~sp~~~~~la~g~~d~~i~~wd~~~~~~~----~~~--~~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 233 T--WHPEKDDTFACGDETGNVSLVNIKNPDSA----QTS--AVHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp E--ECTTSTTEEEEEESSSCEEEEESSCGGGC----EEE--CCCSSCEEEEEECSSSSCCEE
T ss_pred h--hhhcccceEEEeecccceeEEECCCCcEe----EEE--eccceeEEEEEEcCCCCCEEE
Confidence 4 4554 578999999999999999987532 333 36788999999999984 565
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.3e-38 Score=267.73 Aligned_cols=233 Identities=12% Similarity=0.139 Sum_probs=190.4
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecC----Ce
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKD----HT 80 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~ 80 (291)
..|.+.|++++|+|++ ++||+|+.||+|+|||+.+++ ....+.+|.++|.+++|+| ++++|++++.+ +.
T Consensus 56 ~~h~~~v~~~~~spdg----~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 56 TEHSHQTTVAKTSPSG----YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCCSSCEEEEEECTTS----SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEE
T ss_pred cCCCCceEEEEECCCC----cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeE
Confidence 3688999999999999 599999999999999987543 4567789999999999999 88999988865 47
Q ss_pred EEEEECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK 159 (291)
Q Consensus 81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
|++|| .++....+ .+|...|.+++|+|++. .|++|+.|++|++||..+++....+
T Consensus 131 v~~wd--~~~~~~~l---~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l------------------- 186 (611)
T 1nr0_A 131 VFLFD--TGTSNGNL---TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF------------------- 186 (611)
T ss_dssp EEETT--TCCBCBCC---CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-------------------
T ss_pred EEEee--CCCCccee---cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-------------------
Confidence 88887 45555565 79999999999999987 6999999999999998877654433
Q ss_pred ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec-------CCcccEEEE
Q psy10348 160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-------FKDCEIWFI 230 (291)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~ 230 (291)
.+|...|.+++|+ +++|++++.|++|++||+.+++. +..+. +|...|..+
T Consensus 187 ---------~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~------------~~~~~~~~~~~~~h~~~V~~v 245 (611)
T 1nr0_A 187 ---------GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK------------TGVFEDDSLKNVAHSGSVFGL 245 (611)
T ss_dssp ---------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------------EEECBCTTSSSCSSSSCEEEE
T ss_pred ---------ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE------------eeeeccccccccccCCCEEEE
Confidence 3599999999998 77999999999999999987754 33442 677888776
Q ss_pred EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee-------------------------------------EEEecccc
Q psy10348 231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF-------------------------------------QILSHPRC 273 (291)
Q Consensus 231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------------------------------~~~~~~~~ 273 (291)
+|+ |++++|++++.|++|++||+.+++...... ......+|
T Consensus 246 ~~s--pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh 323 (611)
T 1nr0_A 246 TWS--PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH 323 (611)
T ss_dssp EEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EEC--CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC
Confidence 655 669999999999999999998865322110 01122478
Q ss_pred ccceeeeEEccCCceeeC
Q psy10348 274 MSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 274 ~~~v~~~~~s~~g~~l~s 291 (291)
...|++++|+|||++|++
T Consensus 324 ~~~v~~l~~spdg~~l~s 341 (611)
T 1nr0_A 324 NKAITALSSSADGKTLFS 341 (611)
T ss_dssp SSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEEeCCCCEEEE
Confidence 899999999999999874
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-37 Score=246.13 Aligned_cols=232 Identities=18% Similarity=0.265 Sum_probs=183.5
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...|++++|+|++ .++++|+.|++|++||+++++.+..+.+|...|.+++|+| ++.+|++++.|++|++||+.
T Consensus 74 ~h~~~V~~~~~~~~~----~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 74 GHNHFVSDLALSQEN----CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp CCSSCEEEEEECSST----TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESS
T ss_pred cCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEecc
Confidence 578899999999998 5999999999999999999999999999999999999999 89999999999999999998
Q ss_pred CcceeeeeccccCCCCceEEEEEccCC----------CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLG----------TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
+...........|...|.+++|+|++ .+|++++.|+.|++||.. .+...
T Consensus 149 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~------------------- 207 (343)
T 2xzm_R 149 -GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRY------------------- 207 (343)
T ss_dssp -SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEE-------------------
T ss_pred -CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeE-------------------
Confidence 44444433334799999999999987 789999999999999943 22221
Q ss_pred ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD 235 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (291)
.+.+|...|.+++|+ +++|++++.|+.|++||+...... ...+. +...+..+ +++
T Consensus 208 ---------~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~-----------~~~~~-~~~~v~~v--~~s 264 (343)
T 2xzm_R 208 ---------TFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP-----------QREFD-AGSTINQI--AFN 264 (343)
T ss_dssp ---------EEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC-----------SEEEE-CSSCEEEE--EEC
T ss_pred ---------EEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc-----------ceeec-CCCcEEEE--EEC
Confidence 123588999999998 779999999999999999543321 22222 23345554 456
Q ss_pred CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe---------ccccccceeeeEEccCCceeeC
Q psy10348 236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS---------HPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|++.+++++ .|+.|++||+.+.+.... ..+. ..+|...|++++|+|+|++|++
T Consensus 265 p~~~~la~~-~d~~v~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s 326 (343)
T 2xzm_R 265 PKLQWVAVG-TDQGVKIFNLMTQSKAPV--CTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA 326 (343)
T ss_dssp SSSCEEEEE-ESSCEEEEESSSCCSCSE--EECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred CCCCEEEEE-CCCCEEEEEeCCCCCCce--EEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence 778888765 577899999988764321 1111 1267788999999999999874
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-37 Score=267.96 Aligned_cols=232 Identities=23% Similarity=0.326 Sum_probs=194.7
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
..|.+.|++++|+|++. .+|++|+.||+|++|++.+. .....+.+|...|.+++|+| ++++|++|+.||+|
T Consensus 379 ~~H~~~V~~v~~~~~~~---~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNA---DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGEL 454 (694)
T ss_dssp ECCSSCEEEEECCTTCC---SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred ccCCceeEEEEecCCCC---CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcE
Confidence 36899999999998764 69999999999999998753 34567889999999999999 99999999999999
Q ss_pred EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
++||+.+++....+ .+|...|.+++|+|++++|++++.|++|++||+........
T Consensus 455 ~vwd~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~---------------------- 509 (694)
T 3dm0_A 455 RLWDLAAGVSTRRF---VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI---------------------- 509 (694)
T ss_dssp EEEETTTTEEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE----------------------
T ss_pred EEEECCCCcceeEE---eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceee----------------------
Confidence 99999999988888 79999999999999999999999999999999764432110
Q ss_pred CcccccccccCcceeEEEEcC----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348 162 FPQFSTRDIHRNYVDCVRWLG----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW 237 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (291)
.....+|...|.+++|+. ..+++++.|++|++||++..+. ...+.+|...|..++++ |+
T Consensus 510 ---~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~------------~~~~~~h~~~v~~v~~s--pd 572 (694)
T 3dm0_A 510 ---SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL------------RSTLAGHTGYVSTVAVS--PD 572 (694)
T ss_dssp ---CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEEEEEC--TT
T ss_pred ---ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE------------EEEEcCCCCCEEEEEEe--CC
Confidence 011135888999999982 4799999999999999987743 67788898888876655 66
Q ss_pred CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+++|++|+.||.|++||+.+++. ... ..+...|.+++|+|++.+|++
T Consensus 573 g~~l~sg~~Dg~i~iwd~~~~~~------~~~-~~~~~~v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 573 GSLCASGGKDGVVLLWDLAEGKK------LYS-LEANSVIHALCFSPNRYWLCA 619 (694)
T ss_dssp SSEEEEEETTSBCEEEETTTTEE------EEC-CBCSSCEEEEEECSSSSEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCce------EEE-ecCCCcEEEEEEcCCCcEEEE
Confidence 99999999999999999998742 111 234568999999999998863
No 33
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.1e-37 Score=242.98 Aligned_cols=255 Identities=16% Similarity=0.195 Sum_probs=201.6
Q ss_pred ceeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecC-CCcEEEEeec
Q psy10348 3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQ-DFNLLLSVSK 77 (291)
Q Consensus 3 ~~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~ 77 (291)
+.+...|.+.|++++|+|++ ++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|. ++.+|++|+.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYG----RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp CCEECCCSSCEEEEEECSSS----SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cccCcccccceeEEEEcCCC----CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence 34556799999999999998 59999999999999999876 466777899999999999984 4899999999
Q ss_pred CCeEEEEECCCc---------ceeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348 78 DHTLRLWNIKTD---------ICIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 78 dg~i~vwd~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
||.|++||++++ +.+..+ ..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+......
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 156 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM 156 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE
T ss_pred CCeEEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc
Confidence 999999999876 345555 789999999999999 999999999999999999998866554321000
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN 221 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (291)
.. .......|...+.+++|+ ++++++++.|+.+.+|+...... ..+..+.
T Consensus 157 ~~---------------~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 211 (351)
T 3f3f_A 157 KV---------------LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL----------HVAAKLP 211 (351)
T ss_dssp ES---------------CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE----------EEEEECC
T ss_pred cc---------------cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce----------eeeeecC
Confidence 00 000112477889999996 56999999999998888766543 3467778
Q ss_pred CCcccEEEEEEEecCCC----cEEEEEcCCCcEEEEEcCCCCCCc-----------------------------------
Q psy10348 222 FKDCEIWFIRFSMDYWQ----KILAVGNQSGRTYVWDLDVQDPSS----------------------------------- 262 (291)
Q Consensus 222 ~~~~~i~~~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~----------------------------------- 262 (291)
.|...|..++++ |++ ++|++|+.||.|++||+..+....
T Consensus 212 ~h~~~i~~~~~~--p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 212 GHKSLIRSISWA--PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CCCSCEEEEEEC--CCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred CCCcceeEEEEC--CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 888888877665 557 899999999999999998753111
Q ss_pred -----ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 263 -----IKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 263 -----~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.........+|...|++++|+|+|++|++
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence 01223334578899999999999999874
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-37 Score=247.86 Aligned_cols=242 Identities=17% Similarity=0.204 Sum_probs=199.4
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEecCC--CcEEEEeecCCe
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHT 80 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~ 80 (291)
..-.|.+.|++++|+|++ ++||+|+.||.|++||+. +++.+..+.+|...|.+++|++ + +.+|++|+.||.
T Consensus 6 ~~~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGK 80 (379)
T ss_dssp CEEECCCCEEEEEECSSS----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSC
T ss_pred EecCCcccEEEEEEcCCC----CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC-CCCCCEEEEeccCCE
Confidence 344689999999999998 499999999999999998 6677888999999999999987 5 899999999999
Q ss_pred EEEEECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348 81 LRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFD 156 (291)
Q Consensus 81 i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
|++||+.+++ .+..+ ..|...|.+++|+|+ +.+|++++.|+.|++||++........
T Consensus 81 v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~---------------- 141 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI---------------- 141 (379)
T ss_dssp EEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE----------------
T ss_pred EEEEEcCCCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE----------------
Confidence 9999999886 55555 689999999999999 999999999999999999876432211
Q ss_pred CccccCcccccccccCcceeEEEEcC---------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348 157 TQKEHFPQFSTRDIHRNYVDCVRWLG---------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN 221 (291)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (291)
....|...|.+++|++ +++++++.|+.|++||++..... ......+.
T Consensus 142 ----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~ 203 (379)
T 3jrp_A 142 ----------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------YVLESTLE 203 (379)
T ss_dssp ----------EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE--------EEEEEEEC
T ss_pred ----------EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc--------eeeEEEEe
Confidence 1234888899999973 58999999999999999765431 13456777
Q ss_pred CCcccEEEEEEEecCC---CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 222 FKDCEIWFIRFSMDYW---QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 222 ~~~~~i~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.|...+..+++ +|+ +.+|++++.||.|++||+.++.... .........|...|.+++|+|+|++|++
T Consensus 204 ~h~~~v~~~~~--sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 204 GHSDWVRDVAW--SPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp CCSSCEEEEEE--CCCCSSSEEEEEEETTSCEEEEEESSTTSCC-EEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred cccCcEeEEEE--CCCCCCCCeEEEEeCCCEEEEEeCCCCCccc-eeeeeccccCCCcEEEEEEcCCCCEEEE
Confidence 88888776655 577 8999999999999999999875321 2233344467889999999999999874
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.5e-38 Score=252.32 Aligned_cols=234 Identities=22% Similarity=0.303 Sum_probs=189.2
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
.|...|.+++|+|++ ++|++|+.|+.+++|++.+. .....+.+|.+.|.++.|+|.++..|++|+.|++
T Consensus 106 ~h~~~v~~~~~s~~g----~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~ 181 (380)
T 3iz6_a 106 LHCPWVMECAFAPNG----QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT 181 (380)
T ss_dssp CCCTTCCCCEECTTS----SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC
T ss_pred cCCCCEEEEEECCCC----CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc
Confidence 467889999999998 59999999999999998653 2345678999999999999966778999999999
Q ss_pred EEEEECCCcceeeeecc--ccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCc-hhhhhhccccccCCCCcccccc
Q psy10348 81 LRLWNIKTDICIAIFGG--VEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKP-EIKDACAESYTFNPARSTRPFD 156 (291)
Q Consensus 81 i~vwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
|++||+.+++.+..+.. ..+|...|.+++|++ ++.+|++|+.|+.|++||++.. +.+.
T Consensus 182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~------------------ 243 (380)
T 3iz6_a 182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR------------------ 243 (380)
T ss_dssp EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE------------------
T ss_pred EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE------------------
Confidence 99999999988876521 247899999999987 7889999999999999999743 3222
Q ss_pred CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC-------cccE
Q psy10348 157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK-------DCEI 227 (291)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i 227 (291)
.+.+|...|.+++|+ +++|++++.|++|++||++++.. +..+..+ ...+
T Consensus 244 ----------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~------------~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 244 ----------TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ------------LQVYNREPDRNDNELPIV 301 (380)
T ss_dssp ----------EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE------------EEEECCCCSSSCCSSCSC
T ss_pred ----------EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE------------EEEecccccccccccCce
Confidence 234599999999998 77999999999999999998754 3333222 1224
Q ss_pred EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe--ccccccceeeeEEccCCceeeC
Q psy10348 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS--HPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.. ++++|+|++|++|+.||.|++||+..++.. ..+. ..+|.+.|++++|+|||++|++
T Consensus 302 ~~--~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~----~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 302 TS--VAFSISGRLLFAGYSNGDCYVWDTLLAEMV----LNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp SE--EEECSSSSEEEEECTTSCEEEEETTTCCEE----EEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred EE--EEECCCCCEEEEEECCCCEEEEECCCCceE----EEEecccCCCCCceEEEEECCCCCEEEE
Confidence 44 455677999999999999999999887532 2221 2478899999999999999975
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.9e-37 Score=245.12 Aligned_cols=248 Identities=12% Similarity=0.117 Sum_probs=198.5
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
...|.++|++++|+|++ ++|++++.||.|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.||.|++
T Consensus 4 ~~~~~~~i~~~~~s~~~----~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDR----TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYV 78 (372)
T ss_dssp EESCSSCCCEEEECTTS----SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEE
T ss_pred ecccCCCeEEEEECCCC----CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEE
Confidence 34589999999999998 499999999999999999887 8888999999999999999 8999999999999999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
||+++++....+. +..|...|.+++|+|++++|++++.|+.|++||++.+.......
T Consensus 79 wd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~---------------------- 135 (372)
T 1k8k_C 79 WTLKGRTWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK---------------------- 135 (372)
T ss_dssp EEEETTEEEEEEE-CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE----------------------
T ss_pred EECCCCeeeeeEE-eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeee----------------------
Confidence 9998876544431 25789999999999999999999999999999998876311110
Q ss_pred ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCcccc------ccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKEL------RTNETNVTIINRLNFKDCEIWFIRFSMD 235 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (291)
.....|...|.+++|+ +++|++++.|+.|++||++....... .........+..+..|...+..++++
T Consensus 136 --~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 211 (372)
T 1k8k_C 136 --HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-- 211 (372)
T ss_dssp --EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC--
T ss_pred --eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC--
Confidence 0112478899999998 77999999999999999753321100 00011124567777888888776655
Q ss_pred CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|++++|++++.||.|++||+.+++. ...+ ..|..+|.+++|+|++++|++
T Consensus 212 ~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~--~~~~~~v~~~~~~~~~~~l~~ 261 (372)
T 1k8k_C 212 ANGSRVAWVSHDSTVCLADADKKMA----VATL--ASETLPLLAVTFITESSLVAA 261 (372)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTE----EEEE--ECSSCCEEEEEEEETTEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCce----eEEE--ccCCCCeEEEEEecCCCEEEE
Confidence 6699999999999999999998853 2333 367789999999999998874
No 37
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.7e-38 Score=255.73 Aligned_cols=210 Identities=17% Similarity=0.146 Sum_probs=168.4
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
..|+..|+|++|+|... .+||+|+.||.|+|||+.+++... .+.+|.+.|++|+|+|.++.+|++|+.||+|++|
T Consensus 116 ~~~~~~V~~l~~~P~~~---~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 116 APFDRRATSLAWHPTHP---STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EECSSCEEEEEECSSCT---TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CCCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 35778899999999653 599999999999999998776544 3458999999999998778999999999999999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
|++++.. ..+.....+...+.+++|+|++.+|++|+.||.|++||++... +..
T Consensus 193 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~------------------------- 245 (435)
T 4e54_B 193 DFKGNIL-RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWN------------------------- 245 (435)
T ss_dssp ETTSCEE-EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCC-------------------------
T ss_pred eccCCce-eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEE-------------------------
Confidence 9986543 3332223455678899999999999999999999999986533 211
Q ss_pred cccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 165 FSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
+.+|...|.+++|+ + .++++++.|+.|++||++..+.. ..+.....|...|..++| +|++.+|
T Consensus 246 ---~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~---------~~~~~~~~h~~~v~~~~~--spdg~~l 311 (435)
T 4e54_B 246 ---LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK---------ASFLYSLPHRHPVNAACF--SPDGARL 311 (435)
T ss_dssp ---SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS---------SCCSBCCBCSSCEEECCB--CTTSSEE
T ss_pred ---EecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc---------ceEEEeeeccccccceeE--CCCCCee
Confidence 23589999999998 3 48889999999999999876542 112333457777776654 5779999
Q ss_pred EEEcCCCcEEEEEcCCCCC
Q psy10348 242 AVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~ 260 (291)
++|+.||.|++||+.+++.
T Consensus 312 ~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp EEEESSSCEEEEESSSSSS
T ss_pred EEEcCCCEEEEEECCCCcc
Confidence 9999999999999998764
No 38
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=246.94 Aligned_cols=262 Identities=13% Similarity=0.113 Sum_probs=191.2
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-ccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
..|.+.|++++|+|+.. ++.+|++|+.||.|++||+++ ++.+ ..+.+|...|.+++|+| ++++|++++.||.|++|
T Consensus 36 ~~h~~~v~~~~~~~~~~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTL-PGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMW 113 (368)
T ss_dssp SCCSSCEEEEEECCTTS-SSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEEcCCCC-CceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEE
Confidence 36889999999999930 114999999999999999987 5554 77889999999999999 99999999999999999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEE--ccCCCEEEEEecCCcEEEEeccCchhhhhhcccc-----ccCC--------C
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADF--DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESY-----TFNP--------A 149 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~~~--------~ 149 (291)
|+++++.+... .|...|.+++| +|++.+|++++.||.|++||+++++.+..+.... .+.+ +
T Consensus 114 d~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (368)
T 3mmy_A 114 DLSSNQAIQIA----QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE 189 (368)
T ss_dssp ETTTTEEEEEE----ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG
T ss_pred EcCCCCceeec----cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC
Confidence 99988877654 79999999999 8999999999999999999999988766554211 0000 0
Q ss_pred CccccccCccccC--cccccccccCcceeEEEEcCC----EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348 150 RSTRPFDTQKEHF--PQFSTRDIHRNYVDCVRWLGD----FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223 (291)
Q Consensus 150 ~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
+....+....... ........+...+.++.+... .+++++.|+.|++||++..... ..+..+..|
T Consensus 190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~---------~~~~~~~~~ 260 (368)
T 3mmy_A 190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA---------KDNFTFKCH 260 (368)
T ss_dssp GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH---------HHSEEEECS
T ss_pred CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc---------ccceeeeee
Confidence 0111111110000 011111123333333333333 3999999999999999876431 113444444
Q ss_pred cc------------cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 224 DC------------EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 224 ~~------------~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.. .+..+ +++|++++|++|+.||.|++||+.+++. ......|..+|++++|+|+|++|++
T Consensus 261 ~~~~~~~~~~~~~~~v~~~--~~sp~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGI--AFHPVHGTLATVGSDGRFSFWDKDARTK------LKTSEQLDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp EEC----CCCEEECCEEEE--EECTTTCCEEEEETTSCEEEEETTTTEE------EEECCCCSSCEEEEEECTTSSCEEE
T ss_pred ecccccccccccccceEEE--EEecCCCEEEEEccCCeEEEEECCCCcE------EEEecCCCCCceEEEECCCCCeEEE
Confidence 43 45555 4557799999999999999999998742 2334478899999999999999874
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.1e-36 Score=236.94 Aligned_cols=225 Identities=16% Similarity=0.276 Sum_probs=194.0
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.|...|.+++|+|++ ++|++++.||.|++||+++++ ....+..|...|.+++|+| ++++|++++.||.|++||
T Consensus 95 ~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d 169 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDG----CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWD 169 (337)
T ss_dssp CTTSBEEEEEECTTS----SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEEcCCC----CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEe
Confidence 578999999999998 499999999999999999877 5667788999999999999 899999999999999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+++++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 170 ~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------------------------ 222 (337)
T 1gxr_A 170 LHNQTLVRQF---QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD------------------------ 222 (337)
T ss_dssp TTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------------
T ss_pred CCCCceeeee---ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec------------------------
Confidence 9999888888 7899999999999999999999999999999999887654432
Q ss_pred ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
+...+.+++|+ ++++++++.|+.|++||++..+ ...+..+...+..+++ +|++++|++
T Consensus 223 -----~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-------------~~~~~~~~~~v~~~~~--~~~~~~l~~ 282 (337)
T 1gxr_A 223 -----FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-------------KYQLHLHESCVLSLKF--AYCGKWFVS 282 (337)
T ss_dssp -----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-------------EEEECCCSSCEEEEEE--CTTSSEEEE
T ss_pred -----CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-------------eEEEcCCccceeEEEE--CCCCCEEEE
Confidence 67779999998 7799999999999999998764 2345667777776655 466999999
Q ss_pred EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++.||.|++||+.+++.. .. ..|...|.+++|+|++++|++
T Consensus 283 ~~~dg~i~~~~~~~~~~~----~~---~~~~~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYGASI----FQ---SKESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp EETTSEEEEEETTTCCEE----EE---EECSSCEEEEEECTTSCEEEE
T ss_pred ecCCCcEEEEECCCCeEE----EE---ecCCCcEEEEEECCCCCEEEE
Confidence 999999999999987532 22 246789999999999999874
No 40
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-36 Score=255.98 Aligned_cols=223 Identities=20% Similarity=0.317 Sum_probs=190.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...+.+++|+|++ .+|++++.||.|++||. +++.+..+.+|...|.+++|+| ++++|++++.|+.|++||.
T Consensus 342 ~~~~~v~~~~~s~~g----~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~- 414 (577)
T 2ymu_A 342 GHSSSVWGVAFSPDG----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR- 414 (577)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-
T ss_pred CCCCCEEEEEECCCC----CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-
Confidence 467899999999998 49999999999999995 5788889999999999999999 9999999999999999996
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
+++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+.. +.+..
T Consensus 415 ~~~~~~~~---~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~---------------------------- 462 (577)
T 2ymu_A 415 NGQLLQTL---TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQT---------------------------- 462 (577)
T ss_dssp TCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEE----------------------------
T ss_pred CCCEEEEe---cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEE----------------------------
Confidence 46777776 78999999999999999999999999999999643 32222
Q ss_pred ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348 168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 245 (291)
..+|...|.+++|+ +++|++++.|+.|++||.. + +.+..+.+|...|..++|+ |++++|++++
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~------------~~~~~~~~h~~~v~~l~~s--~dg~~l~s~~ 527 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G------------QLLQTLTGHSSSVRGVAFS--PDGQTIASAS 527 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-S------------CEEEEEECCSSCEEEEEEC--TTSSCEEEEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-C------------CEEEEEeCCCCCEEEEEEc--CCCCEEEEEE
Confidence 23488999999998 7799999999999999953 3 3377888899888876655 6699999999
Q ss_pred CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.||.|++||.. ++ .... ..+|.+.|++++|+|||++|++
T Consensus 528 ~dg~v~lwd~~-~~----~~~~--~~~h~~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 528 DDKTVKLWNRN-GQ----LLQT--LTGHSSSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp TTSEEEEECTT-SC----EEEE--EECCSSCEEEEEECTTSSCEEE
T ss_pred CcCEEEEEeCC-CC----EEEE--EcCCCCCEEEEEEcCCCCEEEE
Confidence 99999999964 32 2233 3478999999999999999975
No 41
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-36 Score=240.22 Aligned_cols=200 Identities=17% Similarity=0.259 Sum_probs=175.3
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC-CCcEEEEeecCCeEEEEEC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~ 86 (291)
.|.+.|.+++|+|++ ..|++++.|++|++||+++++.+..+.+|...|.+++|+|. ++.+|++|+.||.|++||+
T Consensus 152 ~h~~~v~~~~~~~~~----~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 152 MHTNYLSACSFTNSD----MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp ECSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred ccCCcEEEEEEeCCC----CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 578899999999998 49999999999999999999999999999999999999883 3589999999999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
++++++..+ ..|...|.+++|+|++.+|++++.|++|++||++.++....+..
T Consensus 228 ~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~------------------------ 280 (354)
T 2pbi_B 228 RSGQCVQAF---ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK------------------------ 280 (354)
T ss_dssp TTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC------------------------
T ss_pred CCCcEEEEe---cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC------------------------
Confidence 999998888 78999999999999999999999999999999988754332210
Q ss_pred cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
..+...+.+++|+ +.+|++++.|+.|++||+.++.. +..+.+|...|..++|+ |++++|++|
T Consensus 281 --~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~------------~~~l~~h~~~v~~l~~s--pdg~~l~sg 344 (354)
T 2pbi_B 281 --ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR------------VSILFGHENRVSTLRVS--PDGTAFCSG 344 (354)
T ss_dssp --TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE------------EEEECCCSSCEEEEEEC--TTSSCEEEE
T ss_pred --CCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce------------EEEEECCCCcEEEEEEC--CCCCEEEEE
Confidence 1134468899998 78999999999999999987744 67788899888877665 669999999
Q ss_pred cCCCcEEEEE
Q psy10348 245 NQSGRTYVWD 254 (291)
Q Consensus 245 ~~dg~i~vwd 254 (291)
+.||+|++|+
T Consensus 345 s~D~~v~vW~ 354 (354)
T 2pbi_B 345 SWDHTLRVWA 354 (354)
T ss_dssp ETTSEEEEEC
T ss_pred cCCCCEEecC
Confidence 9999999996
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.9e-36 Score=254.59 Aligned_cols=252 Identities=19% Similarity=0.283 Sum_probs=198.7
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|++.|++++|+|++ ++||+|+.|+.|+|||. ++++++.+.+|...|++++|+| ++++|++++.|++|++||+
T Consensus 14 GH~~~V~~~a~spdg----~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i~vWd~- 86 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDG----QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR- 86 (577)
T ss_dssp CCSSCEEEEEECTTS----SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEET-
T ss_pred CCCCcEEEEEECCCC----CEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEEC-
Confidence 589999999999999 59999999999999995 6889999999999999999999 9999999999999999996
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc-----cccccCCCCccccccCc----
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA-----ESYTFNPARSTRPFDTQ---- 158 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 158 (291)
+++.+..+ .+|...|.+++|+|++++|++++.|+.+++|+........... ....+.|+.........
T Consensus 87 ~~~~~~~~---~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 87 NGQLLQTL---TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp TSCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred CCCEEEEE---ECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence 47777777 7999999999999999999999999999999976543321111 12233333222211110
Q ss_pred ---cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348 159 ---KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS 233 (291)
Q Consensus 159 ---~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 233 (291)
............|...|.++.++ ++++++++.|+.|++||... ..+..+..|...+..++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~-------------~~~~~~~~~~~~v~~~~~s 230 (577)
T 2ymu_A 164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-------------QLLQTLTGHSSSVRGVAFS 230 (577)
T ss_dssp EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-------------CEEEEEECCSSCEEEEEEC
T ss_pred eccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC-------------cEEEEEecCCCCEEEEEEC
Confidence 01112223345688899999998 77999999999999999643 3367778888888776654
Q ss_pred ecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 234 MDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 234 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|++++|++++.|+.|++||.... ......+|...|++++|+|++++|++
T Consensus 231 --~dg~~l~~~~~d~~i~~w~~~~~-------~~~~~~~~~~~v~~v~~~~d~~~l~~ 279 (577)
T 2ymu_A 231 --PDGQTIASASDDKTVKLWNRNGQ-------LLQTLTGHSSSVNGVAFRPDGQTIAS 279 (577)
T ss_dssp --TTSSCEEEEETTSCEEEECTTSC-------EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred --CCCCEEEEEeCCCEEEEEeCCCC-------EEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 66999999999999999996542 22233478899999999999998874
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.6e-36 Score=243.17 Aligned_cols=235 Identities=16% Similarity=0.241 Sum_probs=188.7
Q ss_pred eecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCC-cEEEEeecC
Q psy10348 8 LIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDF-NLLLSVSKD 78 (291)
Q Consensus 8 ~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~d 78 (291)
.|.+.|++++|+| ++ .+|++|+.||.|++||+.++ +.+..+.+|...|.+++|+| ++ .+|++++.|
T Consensus 79 ~h~~~V~~~~~~p~~~----~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~d 153 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHND----NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCD 153 (402)
T ss_dssp CCSSCEEEEEECTTCT----TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETT
T ss_pred cCCCCEEEEEeCCCCC----CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCC
Confidence 5889999999999 66 59999999999999999987 66888999999999999999 65 799999999
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
|.|++||+++++.+..+. ...|...|.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 154 g~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------------- 215 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLG-PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD----------------- 215 (402)
T ss_dssp SCEEEEETTTTEEEEEEC-TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-----------------
T ss_pred CEEEEEECCCCCccEEEe-cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec-----------------
Confidence 999999999998877761 03689999999999999999999999999999999887654431
Q ss_pred cccCcccccccccCcc-eeEEEEc--CCEEEEe---cCCCeEEEecCCCCCccccccCCCceeeeeeec-CCcccEEEEE
Q psy10348 159 KEHFPQFSTRDIHRNY-VDCVRWL--GDFVLSK---SCENCIICWKPGRLEDKELRTNETNVTIINRLN-FKDCEIWFIR 231 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~ 231 (291)
..|... +.++.|+ +.++++| +.|+.|++||+++.... +.... .+...+..+.
T Consensus 216 ----------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 216 ----------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-----------LSLQELDTSSGVLLPF 274 (402)
T ss_dssp ----------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-----------SEEEECCCCSSCEEEE
T ss_pred ----------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-----------ceEEeccCCCceeEEE
Confidence 125544 8889998 6688888 78999999999886541 11121 2444555554
Q ss_pred EEecCCCcEEE-EEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 232 FSMDYWQKILA-VGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 232 ~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++|++++|+ +|+.||.|++||+.++++. ...+....|..+|.+++|+|++.++++
T Consensus 275 --~s~~~~~l~~~g~~dg~i~i~d~~~~~~~---~~~l~~~~~~~~v~~~~~sp~~~~~~s 330 (402)
T 2aq5_A 275 --FDPDTNIVYLCGKGDSSIRYFEITSEAPF---LHYLSMFSSKESQRGMGYMPKRGLEVN 330 (402)
T ss_dssp --EETTTTEEEEEETTCSCEEEEEECSSTTC---EEEEEEECCSSCCSEEEECCGGGSCGG
T ss_pred --EcCCCCEEEEEEcCCCeEEEEEecCCCcc---eEeecccccCCcccceEEeccccccee
Confidence 456699886 5568999999999988641 233332236689999999999988763
No 44
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.8e-35 Score=233.72 Aligned_cols=228 Identities=21% Similarity=0.294 Sum_probs=191.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 82 (291)
.|.+.|++++|+|+.. ++||+|+.||+|+|||+.+.+ +...+.+|...|.+++|+| ++.+|++++.|+.|+
T Consensus 36 GH~~~V~~v~~sp~~~---~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 36 GHNGWVTQIATTPQFP---DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLR 111 (340)
T ss_dssp CCSSCEEEEEECTTCT---TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred CccCCEEEEEEeCCCC---CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccce
Confidence 3899999999999853 599999999999999987643 4667889999999999999 999999999999999
Q ss_pred EEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
+|+.......... ..+...+..+.+++++.+|++++.|+.+++||+........
T Consensus 112 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~----------------------- 165 (340)
T 4aow_A 112 LWDLTTGTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV----------------------- 165 (340)
T ss_dssp EEETTTTEEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE-----------------------
T ss_pred EEeecccceeeee---cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEE-----------------------
Confidence 9999988877776 67888999999999999999999999999999876543211
Q ss_pred cccccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348 163 PQFSTRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ 238 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (291)
...+|...+..++|. ..++++++.|+.|++||+++.+ .+..+.+|...|..+++ +|++
T Consensus 166 ----~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~------------~~~~~~~h~~~v~~~~~--s~~~ 227 (340)
T 4aow_A 166 ----QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK------------LKTNHIGHTGYLNTVTV--SPDG 227 (340)
T ss_dssp ----CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCEEEEEE--CTTS
T ss_pred ----EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc------------eeeEecCCCCcEEEEEE--CCCC
Confidence 123488889999997 3478999999999999998874 47788888888887665 4679
Q ss_pred cEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 239 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
++|++|+.||.|++||+.+.+. ...+. +...|.+++|+|++.+++
T Consensus 228 ~~l~s~s~Dg~i~iwd~~~~~~----~~~~~---~~~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 228 SLCASGGKDGQAMLWDLNEGKH----LYTLD---GGDIINALCFSPNRYWLC 272 (340)
T ss_dssp SEEEEEETTCEEEEEETTTTEE----EEEEE---CSSCEEEEEECSSSSEEE
T ss_pred CEEEEEeCCCeEEEEEeccCce----eeeec---CCceEEeeecCCCCceee
Confidence 9999999999999999998742 23332 346899999999988775
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-35 Score=240.04 Aligned_cols=229 Identities=18% Similarity=0.296 Sum_probs=190.5
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
...|...|++++|+|++ .+|++|+.||.|++||+.+++.+..+.+|...|.+++|++ ++|++|+.||.|++||
T Consensus 130 ~~~~~~~v~~v~~s~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d 202 (401)
T 4aez_A 130 ETDESTYVASVKWSHDG----SFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHD 202 (401)
T ss_dssp ECCTTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEE
T ss_pred ecCCCCCEEEEEECCCC----CEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEe
Confidence 33478899999999988 5999999999999999999999999999999999999965 6999999999999999
Q ss_pred CC-CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 86 IK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 86 ~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
++ .+..+..+ .+|...|.+++|+|++++|++++.|+.|++||+++++....+
T Consensus 203 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~------------------------ 255 (401)
T 4aez_A 203 VRIANHQIGTL---QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK------------------------ 255 (401)
T ss_dssp TTSSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE------------------------
T ss_pred cccCcceeeEE---cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe------------------------
Confidence 98 45556666 789999999999999999999999999999999987654433
Q ss_pred cccccccCcceeEEEEc---CCEEEEec--CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 165 FSTRDIHRNYVDCVRWL---GDFVLSKS--CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~---~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
..|...|.+++|+ ..++++++ .|+.|++||+++++. +..+. +...+..+ +++|+++
T Consensus 256 ----~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~------------~~~~~-~~~~v~~~--~~s~~~~ 316 (401)
T 4aez_A 256 ----TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR------------VNTVD-AGSQVTSL--IWSPHSK 316 (401)
T ss_dssp ----CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE------------EEEEE-CSSCEEEE--EECSSSS
T ss_pred ----cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE------------EEEEe-CCCcEEEE--EECCCCC
Confidence 2488899999998 34777755 799999999988754 45554 33445554 5557799
Q ss_pred EEEE--EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 240 ILAV--GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++ |+.||.|++||+.+++ ........+|...|.+++|+|+|++|++
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~----~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSG----LTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTE----EEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred eEEEEeecCCCcEEEEecCCcc----ceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 9999 5589999999998863 2344444578899999999999999874
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-36 Score=263.12 Aligned_cols=233 Identities=15% Similarity=0.184 Sum_probs=200.7
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
....|.+.|.+++|+|++ ++||+|+.||.|+|||+.+++.+..+.+|..+|.+++|+| ++.+|++|+.||.|++|
T Consensus 8 ~~~~h~~~v~~i~~sp~~----~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTE----PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEE
T ss_pred eeecCCCceEEEEECCCC----CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEE
Confidence 345689999999999998 5999999999999999999999999999999999999999 89999999999999999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccccCccccCc
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
|+.+++.+..+ .+|...|.+++|+|++++|++++.||.|++||++++. ....
T Consensus 83 ~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~------------------------ 135 (814)
T 3mkq_A 83 NYNTGEKVVDF---EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT------------------------ 135 (814)
T ss_dssp ETTTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE------------------------
T ss_pred ECCCCcEEEEE---ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE------------------------
Confidence 99999998888 7899999999999999999999999999999998762 2222
Q ss_pred ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCc
Q psy10348 164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 239 (291)
..+|...|.+++|+ ++.+++++.|+.|++||+..... ...+.. +...+..+++++.+++.
T Consensus 136 ----~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 136 ----FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP------------NFTLTTGQERGVNYVDYYPLPDKP 199 (814)
T ss_dssp ----EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC------------SEEEECCCTTCCCEEEECCSTTCC
T ss_pred ----EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc------------eeEEecCCCCCEEEEEEEECCCCC
Confidence 23488999999997 45999999999999999987654 333333 33677788888766899
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+|++|+.||.|++||+.+++. ... ..+|...|.+++|+|+|++|++
T Consensus 200 ~l~~~~~dg~i~~~d~~~~~~----~~~--~~~~~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 200 YMITASDDLTIKIWDYQTKSC----VAT--LEGHMSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp EEEEECTTSEEEEEETTTTEE----EEE--EECCSSCEEEEEECSSSSEEEE
T ss_pred EEEEEeCCCEEEEEECCCCcE----EEE--EcCCCCCEEEEEEcCCCCEEEE
Confidence 999999999999999988742 233 3367889999999999998874
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=257.56 Aligned_cols=236 Identities=14% Similarity=0.096 Sum_probs=175.7
Q ss_pred eeeeecceeEEEEeeeccCCC-----CCEEEE-------------------ecCCCeEEEEccCCccee----EEEeeec
Q psy10348 5 YSLLIEENFYTCAWSMDLESG-----RPLLAV-------------------AGSRAVIRIFSPAFHACV----RHFYGHG 56 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~-----~~~l~~-------------------~~~dg~i~vw~~~~~~~~----~~~~~~~ 56 (291)
+.+.+.+.|.+++|+|+.... +++||+ ++.|++|+||++.+++.. ..+..|.
T Consensus 128 ~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~ 207 (524)
T 2j04_B 128 FIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF 207 (524)
T ss_dssp EEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC
T ss_pred EEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC
Confidence 355668899999999986211 135544 567899999999877643 3466778
Q ss_pred cceeEEEEecC-----CCcEEEEeecCCeEEEEECCCccee-----------eeeccccCCCCceEEEEEccCCCEEEEE
Q psy10348 57 HAINELKFHPQ-----DFNLLLSVSKDHTLRLWNIKTDICI-----------AIFGGVEGHRDEVLSADFDLLGTKIMSC 120 (291)
Q Consensus 57 ~~v~~~~~~~~-----~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 120 (291)
+.|.+++|+|. ++.+||+++.||+|++||+..+... ..+ .+|...|.+++|+++ ..|++|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l---~~h~~~v~sv~~s~~-~~lasg 283 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL---SLADSLITTFDFLSP-TTVVCG 283 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE---CCTTTCEEEEEESSS-SEEEEE
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE---EcCCCCEEEEEecCC-CeEEEE
Confidence 99999999993 2579999999999999999866421 233 689999999999986 489999
Q ss_pred ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE--Ec--C-CEEEEecCCCeEE
Q psy10348 121 GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR--WL--G-DFVLSKSCENCII 195 (291)
Q Consensus 121 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~-~~l~~~~~d~~i~ 195 (291)
+.||+|++||++++.... ..+.+|...|.+++ |+ + .+|++++.|++|+
T Consensus 284 s~DgtV~lWD~~~~~~~~---------------------------~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPS---------------------------FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp ETTSEEEEEETTBCSSCS---------------------------EEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred eCCCEEEEEECCCCCCce---------------------------EEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 999999999998753211 11245999999994 55 4 6899999999999
Q ss_pred EecCCCCCccccccCCCceeeeeeecCCcc--cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc
Q psy10348 196 CWKPGRLEDKELRTNETNVTIINRLNFKDC--EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC 273 (291)
Q Consensus 196 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 273 (291)
+||+++.+. +..+.++.. .+..++ ++|+++.+++++.|++|++||++++.+. ..+. +|
T Consensus 337 lWD~~~~~~------------~~~~~~~~~~~~v~~v~--fsp~~~~l~s~~~d~tv~lwd~~~~~~~----~~l~--gH 396 (524)
T 2j04_B 337 IFNPKDIAT------------TKTTVSRFRGSNLVPVV--YCPQIYSYIYSDGASSLRAVPSRAAFAV----HPLV--SR 396 (524)
T ss_dssp EECGGGHHH------------HCEEEEECSCCSCCCEE--EETTTTEEEEECSSSEEEEEETTCTTCC----EEEE--EC
T ss_pred EEECCCCCc------------ccccccccccCcccceE--eCCCcCeEEEeCCCCcEEEEECcccccc----eeee--cC
Confidence 999987644 223333322 244444 4577999999999999999999987643 2333 68
Q ss_pred ccceeeeEEccCCceeeC
Q psy10348 274 MSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 274 ~~~v~~~~~s~~g~~l~s 291 (291)
.+.|++|+|||+|++|++
T Consensus 397 ~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp SSCEEEEECCSSCCBCEE
T ss_pred CCceEEEEeCCCCCeEEE
Confidence 899999999999998874
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-35 Score=236.30 Aligned_cols=239 Identities=10% Similarity=0.180 Sum_probs=199.8
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
..|.+.|++++|+|++ ++|++++.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+
T Consensus 29 ~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEG----DLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp ECCSSCEEEEEECTTS----CEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred EEeeceEEEEEEcCCC----CEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 3588999999999998 5999999999999999999999999999999999999999 8999999999999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
.+++.+..+ .+...|.+++|+|++++|++++.+ +.|++||+........+... .
T Consensus 104 ~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-----------------~ 162 (369)
T 3zwl_B 104 SNGQCVATW----KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV-----------------S 162 (369)
T ss_dssp TTCCEEEEE----ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE-----------------C
T ss_pred CCCcEEEEe----ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc-----------------c
Confidence 999998887 388999999999999999999998 99999999887654433210 0
Q ss_pred CcccccccccCc--ceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348 162 FPQFSTRDIHRN--YVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW 237 (291)
Q Consensus 162 ~~~~~~~~~~~~--~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (291)
.........|.. .+.+++|+ ++++++++.||.|++||+++.. ..+..+..+...+..++++ |+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~~v~~~~~~--~~ 229 (369)
T 3zwl_B 163 EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-----------EYVDSIDLHEKSISDMQFS--PD 229 (369)
T ss_dssp SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT-----------EEEEEEECCSSCEEEEEEC--TT
T ss_pred cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-----------EeEEEEecCCCceeEEEEC--CC
Confidence 011122223444 89999998 7799999999999999998732 3377778888888776555 66
Q ss_pred CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 238 QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 238 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+.+|++++.||.|++||+.+++. ...+. +...+.+++|+|+++++++
T Consensus 230 ~~~l~~~~~d~~i~v~d~~~~~~----~~~~~---~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 230 LTYFITSSRDTNSFLVDVSTLQV----LKKYE---TDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp SSEEEEEETTSEEEEEETTTCCE----EEEEE---CSSCEEEEEECSSSSEEEE
T ss_pred CCEEEEecCCceEEEEECCCCce----eeeec---CCCCceeEEecCCCceEEE
Confidence 99999999999999999998753 23333 5578999999999999873
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-35 Score=233.87 Aligned_cols=227 Identities=16% Similarity=0.222 Sum_probs=188.6
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce---eEEEe--eeccceeEEEEecCCCcEEEEeecCCe
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC---VRHFY--GHGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~---~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
...|.+.|++++|+|++ +++++++ ||.|++||+.+++. +..+. .|...|.+++|+| ++++|++++.||.
T Consensus 47 ~~~h~~~v~~~~~~~~~----~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPT----RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEAST 120 (337)
T ss_dssp EECCSSCCCEEEECSSS----SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSE
T ss_pred eccCCCceEEEEEecCC----cEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCc
Confidence 45689999999999998 4999998 99999999987653 34444 7889999999999 8999999999999
Q ss_pred EEEEECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 81 LRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 81 i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
|++||+.+++ ....+ ..|...|.+++|+|++++|++++.||.|++||+++++....+
T Consensus 121 i~~~d~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~------------------ 179 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAEL---TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF------------------ 179 (337)
T ss_dssp EEEEECCCC--EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------
T ss_pred EEEEECCCCCcceeeec---ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee------------------
Confidence 9999999876 44444 689999999999999999999999999999999987755443
Q ss_pred cccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC
Q psy10348 159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY 236 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 236 (291)
..|...|.+++|+ ++++++++.|+.|++||+++.+. +..+. +...+.. ++++|
T Consensus 180 ----------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~------------~~~~~-~~~~v~~--~~~s~ 234 (337)
T 1gxr_A 180 ----------QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ------------LQQHD-FTSQIFS--LGYCP 234 (337)
T ss_dssp ----------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------------EEEEE-CSSCEEE--EEECT
T ss_pred ----------ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce------------Eeeec-CCCceEE--EEECC
Confidence 2488899999998 77999999999999999988743 34443 3444555 45567
Q ss_pred CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++|++++.||.|++||+.+.+. .....|...|.+++|+|++++|++
T Consensus 235 ~~~~l~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 235 TGEWLAVGMESSNVEVLHVNKPDK-------YQLHLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp TSSEEEEEETTSCEEEEETTSSCE-------EEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCCe-------EEEcCCccceeEEEECCCCCEEEE
Confidence 799999999999999999998742 233478889999999999998874
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.8e-36 Score=242.19 Aligned_cols=234 Identities=13% Similarity=0.104 Sum_probs=189.6
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ .+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||++
T Consensus 137 ~h~~~v~~~~~~~~~----~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 137 AHVSEITKLKFFPSG----EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp SSSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETT
T ss_pred cccCccEEEEECCCC----CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECC
Confidence 588999999999998 5999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEE---------------------EccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSAD---------------------FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~---------------------~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
+++.+..+.....+...|.+++ |+|++++|++++.||.|++||+++++....+.
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----- 286 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP----- 286 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC-----
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc-----
Confidence 9998888743334555555554 57889999999999999999999877544332
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF- 222 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~- 222 (291)
..|...|.+++|+ +. +|++++.||.|++||+++.+.. +..+..
T Consensus 287 ----------------------~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~-----------~~~~~~~ 333 (420)
T 3vl1_A 287 ----------------------SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP-----------VGEFLIN 333 (420)
T ss_dssp ----------------------CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC-----------SEEEEES
T ss_pred ----------------------cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc-----------hhhhhcc
Confidence 2378889999998 44 9999999999999999886532 444544
Q ss_pred CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee---EEEeccccccceeeeEEccCCc
Q psy10348 223 KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF---QILSHPRCMSAVRQTTLSKNGN 287 (291)
Q Consensus 223 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~~~~v~~~~~s~~g~ 287 (291)
+...+..+.+ +++++|++++.||.|++|++.......... .......|.+.|.+++|+|+++
T Consensus 334 ~~~~v~~~~~---~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 334 EGTPINNVYF---AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp TTSCEEEEEE---ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred CCCCceEEEe---CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence 5566666633 348899999999999999998754321110 1112236778999999999999
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-35 Score=237.07 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=171.3
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.|.+.|++++|+|++. .+|++|+.||.|++||+.+++....+. +|...|.+++|+|.++.+|++++.|+.|++||
T Consensus 71 ~h~~~v~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHP---TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp CCSSCEEEEEECSSCT---TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred CCCCCEEEEEECCCCC---CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 5789999999999973 499999999999999999888877775 69999999999996679999999999999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
++. ..+..+.....|...|.+++|+|++++|++++.|+.|++||++ ++....+
T Consensus 148 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~------------------------- 200 (383)
T 3ei3_B 148 FSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKE------------------------- 200 (383)
T ss_dssp TTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEE-------------------------
T ss_pred CCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEe-------------------------
Confidence 985 5555554334566889999999999999999999999999994 3333222
Q ss_pred ccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecC-CCcEE
Q psy10348 166 STRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDY-WQKIL 241 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~l 241 (291)
..|...|.+++|+ ++ ++++++.|+.|++||+++.+.. ...+..+ .|...+..++++ | ++.+|
T Consensus 201 ---~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--------~~~~~~~-~~~~~v~~~~~s--~~~~~~l 266 (383)
T 3ei3_B 201 ---KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK--------NSYIAEM-PHEKPVNAAYFN--PTDSTKL 266 (383)
T ss_dssp ---ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST--------TCEEEEE-ECSSCEEEEEEC--TTTSCEE
T ss_pred ---ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc--------cceEEEe-cCCCceEEEEEc--CCCCCEE
Confidence 3488999999998 55 8999999999999999874321 0224444 466777766554 6 69999
Q ss_pred EEEcCCCcEEEEEcCCCCC
Q psy10348 242 AVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~ 260 (291)
++++.||.|++||+.+++.
T Consensus 267 ~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 267 LTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEESSSEEEEEETTBTTS
T ss_pred EEEcCCCcEEEEECCCCcc
Confidence 9999999999999987654
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=246.17 Aligned_cols=242 Identities=16% Similarity=0.287 Sum_probs=196.3
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
..+.|...|++++|+|++ .+|++|+.||.|++||+.+ .+.+..+.+|...|.+++|+|+++.+|++++.||.
T Consensus 62 ~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 137 (416)
T 2pm9_A 62 ASLQVDSKFNDLDWSHNN----KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE 137 (416)
T ss_dssp CCCCCSSCEEEEEECSSS----SCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC
T ss_pred EEEecCCceEEEEECCCC----CeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe
Confidence 345688999999999998 4999999999999999987 35778888999999999999943899999999999
Q ss_pred EEEEECCCcc------eeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccc
Q psy10348 81 LRLWNIKTDI------CIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTR 153 (291)
Q Consensus 81 i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 153 (291)
|++||+.+++ ....+.....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+....
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--------- 208 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS--------- 208 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC---------
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc---------
Confidence 9999999876 33333333679999999999999 7899999999999999999887655443100
Q ss_pred cccCccccCcccccccccCcceeEEEEc--C-CEEEEecCCC---eEEEecCCCCCccccccCCCceeeeeeec-CCccc
Q psy10348 154 PFDTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCEN---CIICWKPGRLEDKELRTNETNVTIINRLN-FKDCE 226 (291)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 226 (291)
...+|...|.+++|+ + .++++++.|+ .|++||+++.... +..+. .|...
T Consensus 209 -------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-----------~~~~~~~~~~~ 264 (416)
T 2pm9_A 209 -------------PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-----------LQTLNQGHQKG 264 (416)
T ss_dssp -------------CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-----------SBCCCSCCSSC
T ss_pred -------------cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-----------cEEeecCccCc
Confidence 012347889999998 3 4899999998 9999999886322 55566 77777
Q ss_pred EEEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCC-ceeeC
Q psy10348 227 IWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNG-NVLLC 291 (291)
Q Consensus 227 i~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~s 291 (291)
+..++++ | ++++|++++.||.|++||+.+++. ... ...|...|.+++|+|++ ++|++
T Consensus 265 v~~~~~s--~~~~~~l~s~~~dg~v~~wd~~~~~~----~~~--~~~~~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 265 ILSLDWC--HQDEHLLLSSGRDNTVLLWNPESAEQ----LSQ--FPARGNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp EEEEEEC--SSCSSCEEEEESSSEEEEECSSSCCE----EEE--EECSSSCCCCEEECTTCTTEEEE
T ss_pred eeEEEeC--CCCCCeEEEEeCCCCEEEeeCCCCcc----cee--ecCCCCceEEEEECCCCCCEEEE
Confidence 7776665 5 699999999999999999998752 222 33678899999999999 67763
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-35 Score=239.41 Aligned_cols=254 Identities=15% Similarity=0.209 Sum_probs=196.3
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEcc----CCcc------eeEEEee----------eccceeEEEEec
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSP----AFHA------CVRHFYG----------HGHAINELKFHP 66 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~----~~~~------~~~~~~~----------~~~~v~~~~~~~ 66 (291)
..|.+.|++++|+|++. .+||+|+.||.|++|++ .+++ ....+.. |.+.|.+++|+|
T Consensus 42 ~~~~~~v~~~~~s~~~~---~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDE---SILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp EEECSCCSEEEECSSCT---TEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred eeccCceEEEEECCCCC---cEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence 34568999999999983 39999999999999999 8887 4555554 678999999999
Q ss_pred CCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc---
Q psy10348 67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES--- 143 (291)
Q Consensus 67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--- 143 (291)
++.+|++++.||.|++|| .+++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+...
T Consensus 119 -~~~~l~~~~~dg~i~i~~-~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 119 -DGNSIVTGVENGELRLWN-KTGALLNVL---NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp -TSSEEEEEETTSCEEEEE-TTSCEEEEE---CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred -CCCEEEEEeCCCeEEEEe-CCCCeeeec---cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 999999999999999999 567777777 789999999999999999999999999999999988766544321
Q ss_pred ------------------cccCCCCc---------cccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348 144 ------------------YTFNPARS---------TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCI 194 (291)
Q Consensus 144 ------------------~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i 194 (291)
+.+.++.. ...+... ..........|...|.+++|+ +++|++++.|+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQIT--EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGGGCEEEEETT--CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcC--CCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 11111111 0000100 112233445789999999998 7799999999999
Q ss_pred EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348 195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCM 274 (291)
Q Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 274 (291)
++||++..+. +..+..+...+..+++. |++ ++++++.||.|++||+.+++. ...+ ..|.
T Consensus 272 ~i~d~~~~~~------------~~~~~~~~~~i~~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~----~~~~--~~~~ 330 (425)
T 1r5m_A 272 RIWHGGNGNS------------QNCFYGHSQSIVSASWV--GDD-KVISCSMDGSVRLWSLKQNTL----LALS--IVDG 330 (425)
T ss_dssp EEECSSSBSC------------SEEECCCSSCEEEEEEE--TTT-EEEEEETTSEEEEEETTTTEE----EEEE--ECTT
T ss_pred EEEECCCCcc------------ceEecCCCccEEEEEEC--CCC-EEEEEeCCCcEEEEECCCCcE----eEec--ccCC
Confidence 9999988754 66677788888777766 557 999999999999999988742 2233 3677
Q ss_pred cceeeeEEccCCceeeC
Q psy10348 275 SAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 275 ~~v~~~~~s~~g~~l~s 291 (291)
..|.+++|+|++++|++
T Consensus 331 ~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAV 347 (425)
T ss_dssp CCEEEEEECTTSSEEEE
T ss_pred ccEEEEEEcCCCCEEEE
Confidence 89999999999999874
No 54
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-35 Score=254.25 Aligned_cols=236 Identities=21% Similarity=0.293 Sum_probs=186.9
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
..|...|.+++|+|++ ++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||.
T Consensus 427 ~~h~~~v~~v~~s~~g----~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDG----QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp ECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECT
T ss_pred cCCCCcEEEEEECCCC----CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEC
Confidence 3588999999999998 5999999999999999999999999999999999999999 8999999999999999998
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCC--CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLG--TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
.............+|...|.+++|+|++ ..|++++.|+.|++||+++++....+
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~------------------------ 557 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL------------------------ 557 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE------------------------
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE------------------------
Confidence 7554443333335799999999999987 58999999999999999887654433
Q ss_pred cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348 165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA 242 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 242 (291)
.+|...|++++|+ +++|++++.|+.|++||+++++. +..+..+ ..+..+ +++|++.+|+
T Consensus 558 ----~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~------------~~~~~~~-~~v~~~--~~sp~~~~l~ 618 (694)
T 3dm0_A 558 ----AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK------------LYSLEAN-SVIHAL--CFSPNRYWLC 618 (694)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE------------EECCBCS-SCEEEE--EECSSSSEEE
T ss_pred ----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce------------EEEecCC-CcEEEE--EEcCCCcEEE
Confidence 3599999999998 78999999999999999988743 4444433 345554 5557788888
Q ss_pred EEcCCCcEEEEEcCCCCCCcceeEEE-------------eccccccceeeeEEccCCceeeC
Q psy10348 243 VGNQSGRTYVWDLDVQDPSSIKFQIL-------------SHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 243 ~~~~dg~i~vwd~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+++ |+.|++||+.+++.+....... ....+...+++++|||||++|++
T Consensus 619 ~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 619 AAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp EEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred EEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence 776 4569999999875322110000 00011224789999999999985
No 55
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-35 Score=239.66 Aligned_cols=234 Identities=10% Similarity=0.165 Sum_probs=189.9
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc------eeEEEeeeccceeEEEEecCC----C---cEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA------CVRHFYGHGHAINELKFHPQD----F---NLLLS 74 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~~----~---~~l~s 74 (291)
.|.+.|++++|+| . +|++|+.||.|++|++.+++ .+..+.+|...|.+++|+| + + .+|++
T Consensus 14 ~h~~~i~~~~~~~-~-----~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 14 AHDADIFSVSACN-S-----FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVAT 86 (397)
T ss_dssp CSSSCEEEEEECS-S-----EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEE
T ss_pred hhhcCeEEEEecC-C-----eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEEE
Confidence 5889999999998 3 99999999999999999887 7888899999999999999 7 8 99999
Q ss_pred eecCCeEEEEECCCcce-----eeeeccccCC-----CCceEEEEEc----cCCCE-EEEEecCCcEEEEeccC------
Q psy10348 75 VSKDHTLRLWNIKTDIC-----IAIFGGVEGH-----RDEVLSADFD----LLGTK-IMSCGMDHSLKLWDLTK------ 133 (291)
Q Consensus 75 ~~~dg~i~vwd~~~~~~-----~~~~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~d~~i~v~d~~~------ 133 (291)
++.||.|++||+.+++. ...+ ..| ...|.+++|+ |++++ |++++.||.|++||+++
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKL---DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEE---CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EcCCCCEEEEEccCCcccccccceee---cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999998876 6666 567 6999999999 99999 99999999999999998
Q ss_pred chhhh-----hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccc
Q psy10348 134 PEIKD-----ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKE 206 (291)
Q Consensus 134 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (291)
++.+. .+... ......|...|.+++|+ + ++++++.|+.|++||+++.+
T Consensus 164 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--- 218 (397)
T 1sq9_A 164 SLTLNWSPTLELQGT---------------------VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR--- 218 (397)
T ss_dssp HTTTCCCCEEEEEEE---------------------ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE---
T ss_pred cceeeccCcceeeee---------------------eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc---
Confidence 54433 11100 00112378889999998 6 99999999999999998763
Q ss_pred cccCCCceeeeeeecC---C---cccEEEEEEEecCCCcEEEEEcCC---CcEEEEEcCCCCCCcceeEEEecc------
Q psy10348 207 LRTNETNVTIINRLNF---K---DCEIWFIRFSMDYWQKILAVGNQS---GRTYVWDLDVQDPSSIKFQILSHP------ 271 (291)
Q Consensus 207 ~~~~~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~------ 271 (291)
.+..+.. | ...+..++++ |++++|++++.| |.|++||+.+++. ...+...
T Consensus 219 ---------~~~~~~~~~~h~~~~~~i~~i~~~--~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 219 ---------PLYNFESQHSMINNSNSIRSVKFS--PQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQA 283 (397)
T ss_dssp ---------EEEEEECCC---CCCCCEEEEEEC--SSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC------
T ss_pred ---------eeEEEeccccccccCCccceEEEC--CCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCcccccc
Confidence 3667776 6 7777766655 669999999999 9999999998753 2233211
Q ss_pred -----ccccceeeeEEccCCceeeC
Q psy10348 272 -----RCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 272 -----~~~~~v~~~~~s~~g~~l~s 291 (291)
.|...|.+++|+|++++|++
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~ 308 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCS 308 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEE
T ss_pred cccccccCCcEEEEEECCCCCEEEE
Confidence 18889999999999999874
No 56
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.9e-35 Score=232.73 Aligned_cols=234 Identities=10% Similarity=-0.018 Sum_probs=186.9
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLR 82 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~ 82 (291)
..|.+.|++++|+|++ .+|++++.||.|++|++.+++ ....+..|...|.+++|+| ++. +|++|+.||.|+
T Consensus 8 ~~h~~~v~~~~~s~~~----~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSK----SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGG----TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCC----CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEE
Confidence 3688999999999998 499999999999999998776 3455668999999999999 889 999999999999
Q ss_pred EEEC-CCcceeeeeccccC--CCCceEEEEEccCCCEEEEEecCCcEEEEeccC---------chhhhhhccccccCCCC
Q psy10348 83 LWNI-KTDICIAIFGGVEG--HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK---------PEIKDACAESYTFNPAR 150 (291)
Q Consensus 83 vwd~-~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~~~~~~ 150 (291)
+||+ .+++. ..+ .+ |...|.+++|+| +.+|++++.|+.|++||+++ ++.+..+.
T Consensus 83 ~wd~~~~~~~-~~~---~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--------- 148 (342)
T 1yfq_A 83 KVDLIGSPSF-QAL---TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--------- 148 (342)
T ss_dssp EECSSSSSSE-EEC---BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---------
T ss_pred EEEeccCCce-Eec---cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---------
Confidence 9999 87655 444 57 999999999999 99999999999999999986 44332221
Q ss_pred ccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCC-CCccccccCCCceeeeeeecCCcccEEE
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWF 229 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (291)
|...|.+++|+++.+++++.|+.|++||++. .... .......+...+..
T Consensus 149 --------------------~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----------~~~~~~~~~~~i~~ 198 (342)
T 1yfq_A 149 --------------------VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN----------GTIEESGLKYQIRD 198 (342)
T ss_dssp --------------------SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCC----------CEEEECSCSSCEEE
T ss_pred --------------------eCCceEEEEecCCcEEEEeCCCeEEEEECCcccccc----------ceeeecCCCCceeE
Confidence 7788999999977799999999999999987 4331 12333445566665
Q ss_pred EEEEecC-CCcEEEEEcCCCcEEEEEcCCC--CCCcceeEEEecc-------ccccceeeeEEccCCceeeC
Q psy10348 230 IRFSMDY-WQKILAVGNQSGRTYVWDLDVQ--DPSSIKFQILSHP-------RCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 230 ~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~-------~~~~~v~~~~~s~~g~~l~s 291 (291)
+++ +| +++++++++.||.|++|++... .........+... .|...|.+++|+|++++|++
T Consensus 199 i~~--~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 268 (342)
T 1yfq_A 199 VAL--LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT 268 (342)
T ss_dssp EEE--CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE
T ss_pred EEE--CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE
Confidence 555 56 6999999999999999999876 1111222333321 23459999999999998874
No 57
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.2e-36 Score=237.84 Aligned_cols=251 Identities=12% Similarity=0.184 Sum_probs=196.4
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-----cceeEEEEecCC----CcEEEEeecC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-----HAINELKFHPQD----FNLLLSVSKD 78 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~----~~~l~s~~~d 78 (291)
.|.++|++++|+|+...+...+++++.++.|++||+.+++.+..+..|. ..|.+++|+| + +.+|++|+.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTY-DSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEE-CTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEecc-CCCCCCCEEEEecCC
Confidence 4889999999999622222578888888899999999988887777544 6799999999 6 6799999999
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
|.|++||+.+++.+..+ .+|...|.+++|+| ++.+|++++.||.|++||+++++....+.
T Consensus 95 g~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------------- 155 (366)
T 3k26_A 95 GIIRIINPITMQCIKHY---VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG---------------- 155 (366)
T ss_dssp CEEEEECTTTCCEEEEE---ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC----------------
T ss_pred CEEEEEEchhceEeeee---cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec----------------
Confidence 99999999999998888 68999999999999 89999999999999999999887554431
Q ss_pred ccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC----------------CCceeeeee
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN----------------ETNVTIINR 219 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------------~~~~~~~~~ 219 (291)
....|...|.+++|+ +++|++++.|+.|++||+++.+....... .........
T Consensus 156 ---------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 156 ---------GVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp ---------STTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred ---------ccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 113488999999998 77999999999999999987643311000 000011233
Q ss_pred ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc--------ceeEEEeccccccceeeeEEccC--Ccee
Q psy10348 220 LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS--------IKFQILSHPRCMSAVRQTTLSKN--GNVL 289 (291)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--------~~~~~~~~~~~~~~v~~~~~s~~--g~~l 289 (291)
...|...+..+++. +++|++++.||.|++||+.+.+... ..........|...|++++|+|+ |++|
T Consensus 227 ~~~~~~~v~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 227 RDIHRNYVDCVRWL----GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp CSSCSSCCCEEEEE----TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred ccCCcceEEEEEEc----CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 44577778777775 6799999999999999998865311 11123334477889999999999 9998
Q ss_pred eC
Q psy10348 290 LC 291 (291)
Q Consensus 290 ~s 291 (291)
++
T Consensus 303 ~~ 304 (366)
T 3k26_A 303 AL 304 (366)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-36 Score=248.12 Aligned_cols=202 Identities=9% Similarity=0.045 Sum_probs=166.1
Q ss_pred ecceeEEEEeeeccC--CCCCEEEEecCCCeEEEEccCCcce-----------eEEEeeeccceeEEEEecCCCcEEEEe
Q psy10348 9 IEENFYTCAWSMDLE--SGRPLLAVAGSRAVIRIFSPAFHAC-----------VRHFYGHGHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~--~~~~~l~~~~~dg~i~vw~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~s~ 75 (291)
|.+.|.+++|+|++. +++.+||+++.||+|+|||+.+++. ...+.+|...|++++|++ + ..|++|
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasg 283 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCG 283 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEE
Confidence 468899999999732 2346999999999999999986642 246788999999999998 5 489999
Q ss_pred ecCCeEEEEECCCcce-eeeeccccCCCCceEEE--EEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348 76 SKDHTLRLWNIKTDIC-IAIFGGVEGHRDEVLSA--DFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS 151 (291)
Q Consensus 76 ~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 151 (291)
+.||+|++||++++.. ...+ .+|...|.++ .|+|++ .+|++|+.|++|++||+++++....+..
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~---~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~--------- 351 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYD---QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS--------- 351 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEE---ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE---------
T ss_pred eCCCEEEEEECCCCCCceEEe---ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc---------
Confidence 9999999999997643 3445 6899999999 578887 8999999999999999998876554321
Q ss_pred cccccCccccCcccccccccC--cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348 152 TRPFDTQKEHFPQFSTRDIHR--NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI 227 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 227 (291)
|. ..|.+++|+ ++.+++++.|++|++||++.... +..+.+|...|
T Consensus 352 -------------------~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~------------~~~l~gH~~~V 400 (524)
T 2j04_B 352 -------------------RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA------------VHPLVSRETTI 400 (524)
T ss_dssp -------------------ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC------------CEEEEECSSCE
T ss_pred -------------------ccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc------------ceeeecCCCce
Confidence 32 247889998 56899999999999999988754 56677888888
Q ss_pred EEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
+.++| +|++++|++|+.||+|++||+..
T Consensus 401 ~sva~--Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 401 TAIGV--SRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEC--CSSCCBCEEEETTTEEECCBSCS
T ss_pred EEEEe--CCCCCeEEEEECCCEEEEEechH
Confidence 87766 56799999999999999999754
No 59
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.3e-35 Score=240.36 Aligned_cols=244 Identities=20% Similarity=0.294 Sum_probs=193.2
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----------cceeEEEeeeccceeEEEEecCCCc-EEE
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----------HACVRHFYGHGHAINELKFHPQDFN-LLL 73 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~-~l~ 73 (291)
....|.+.|++++|+|++. .+||+++.||.|++|++.+ .+.+..+.+|...|.+++|+| ++. +|+
T Consensus 123 ~~~~h~~~v~~l~~~p~~~---~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~ 198 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNA---CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP-NLNGYLL 198 (430)
T ss_dssp EEEEESSCCSEEEEETTEE---EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT-TSTTEEE
T ss_pred EEEcCCCcEEEEEECCCCC---cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC-CCCCeEE
Confidence 3567899999999999732 5999999999999999986 577888999999999999999 666 999
Q ss_pred EeecCCeEEEEECCCcce----eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 74 SVSKDHTLRLWNIKTDIC----IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 74 s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
+|+.||.|++||+..+.. +.....+.+|...|.+++|+| ++.+|++++.||.|++||++++....
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~---------- 268 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK---------- 268 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS----------
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc----------
Confidence 999999999999987422 111122268999999999999 67799999999999999999763111
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC 225 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
.......|...|++++|+ +. ++++|+.||.|++||++.... .+..+..|..
T Consensus 269 ---------------~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-----------~~~~~~~h~~ 322 (430)
T 2xyi_A 269 ---------------PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-----------KLHSFESHKD 322 (430)
T ss_dssp ---------------CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-----------CSEEEECCSS
T ss_pred ---------------ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-----------CeEEeecCCC
Confidence 111123588999999998 44 789999999999999987532 2677778888
Q ss_pred cEEEEEEEecCCC-cEEEEEcCCCcEEEEEcCCCCCCcc--------eeEEEeccccccceeeeEEccCCc-eee
Q psy10348 226 EIWFIRFSMDYWQ-KILAVGNQSGRTYVWDLDVQDPSSI--------KFQILSHPRCMSAVRQTTLSKNGN-VLL 290 (291)
Q Consensus 226 ~i~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 290 (291)
.+..++|+ |++ .+|++++.||.|++||+........ ......+.+|...|++++|+|+++ +|+
T Consensus 323 ~v~~i~~s--p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 395 (430)
T 2xyi_A 323 EIFQVQWS--PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC 395 (430)
T ss_dssp CEEEEEEC--SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEE
T ss_pred CEEEEEEC--CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEE
Confidence 88877665 557 4799999999999999987432110 124445568889999999999999 554
No 60
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=237.59 Aligned_cols=246 Identities=12% Similarity=0.126 Sum_probs=192.4
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEeeeccceeEEEE------ecCCCcEEEEeec
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFYGHGHAINELKF------HPQDFNLLLSVSK 77 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~l~s~~~ 77 (291)
....|...|.+++|+|+. +++.+|++|+.||.|++||+.+++ .+..+.+|...|.+++| +| ++.+|++++.
T Consensus 60 ~~~~~~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~ 137 (357)
T 3i2n_A 60 REIEKAKPIKCGTFGATS-LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSR 137 (357)
T ss_dssp EEEEESSCEEEEECTTCC-TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEET
T ss_pred eeecccCcEEEEEEcCCC-CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeC
Confidence 345788999999999983 112599999999999999999988 88999999999999965 67 8899999999
Q ss_pred CCeEEEEECCCcc-eeeeeccccCC-CCceEEEE----EccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348 78 DHTLRLWNIKTDI-CIAIFGGVEGH-RDEVLSAD----FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS 151 (291)
Q Consensus 78 dg~i~vwd~~~~~-~~~~~~~~~~~-~~~i~~~~----~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 151 (291)
||.|++||+++++ .+..+....++ ...+.+++ |+|++++|++++.||.|++||+++++....
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------------ 205 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE------------ 205 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE------------
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee------------
Confidence 9999999999886 56666321222 33899998 788999999999999999999998775322
Q ss_pred cccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348 152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE 226 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
..|...|.+++|+ ++++++++.|+.|++||+++.+.... .....+..|...
T Consensus 206 -----------------~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~~ 261 (357)
T 3i2n_A 206 -----------------TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG-------FASVSEKAHKST 261 (357)
T ss_dssp -----------------EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE-------EEEEEEECCSSC
T ss_pred -----------------cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc-------eeeeccCCCcCC
Confidence 2378889999997 46999999999999999987643200 112234478888
Q ss_pred EEEEEEEecCCCc-EEEEEcCCCcEEEEEcCCCCCCc-------------ceeEEEeccccccceeeeEEccCCceee
Q psy10348 227 IWFIRFSMDYWQK-ILAVGNQSGRTYVWDLDVQDPSS-------------IKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 227 i~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+..++++ |+++ +|++|+.||.|++||+..+.... .........+|..+|++++|+|+|++|+
T Consensus 262 v~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 262 VWQVRHL--PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC 337 (357)
T ss_dssp EEEEEEE--TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred EEEEEEC--CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence 8877766 5588 89999999999999998765331 1123334457889999999999999886
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.6e-35 Score=235.54 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=194.5
Q ss_pred eeeecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-------------eeccceeEEEEecCCCcE
Q psy10348 6 SLLIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-------------GHGHAINELKFHPQDFNL 71 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~ 71 (291)
...|.+.|++++|+| ++ .+|++|+.||.|++||+.+++....+. +|...|.+++|+|.++.+
T Consensus 39 ~~~h~~~v~~~~~s~~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEG----RYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp CCCCSSCEEEEEECTTTC----CEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeccCCcEEEEEEecCCC----CEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 345899999999999 87 599999999999999999887655543 489999999999977789
Q ss_pred EEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC---CEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG---TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 72 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
|++++.||.|++||+.+++....+ .+...+.++.|++.+ .++++++.|+.|++||+++++....+
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-------- 182 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVF----NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL-------- 182 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEE----ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE--------
T ss_pred EEEEeCCCeEEEeeCCCCccceec----cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee--------
Confidence 999999999999999999888877 478889999999854 49999999999999999987755443
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccC----CCceeeeeeec
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTN----ETNVTIINRLN 221 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~ 221 (291)
..|...|.+++|+ ++ ++++++.||.|++||++.......... ...........
T Consensus 183 --------------------~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 183 --------------------QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp --------------------CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred --------------------cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence 3488999999998 44 689999999999999987653211000 00111122234
Q ss_pred CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce-------------------------------------
Q psy10348 222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK------------------------------------- 264 (291)
Q Consensus 222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~------------------------------------- 264 (291)
.+...+..+++ +|++++|++++.||.|++||+.+++.....
T Consensus 243 ~~~~~v~~~~~--~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d 320 (408)
T 4a11_B 243 AHNGKVNGLCF--TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 (408)
T ss_dssp SCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred cccCceeEEEE--cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence 56677776655 467999999999999999999886532110
Q ss_pred ----eEEEeccccccceeeeEEccCCceeeC
Q psy10348 265 ----FQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 265 ----~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.......+|...|++++|+|++++|++
T Consensus 321 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 351 (408)
T 4a11_B 321 VYSGEQITMLKGHYKTVDCCVFQSNFQELYS 351 (408)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred CcCCcceeeeccCCCeEEEEEEcCCCCEEEE
Confidence 112233468899999999999999874
No 62
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.3e-36 Score=241.75 Aligned_cols=252 Identities=12% Similarity=0.124 Sum_probs=167.0
Q ss_pred CEEEEecCCCeEEEEccCCcceeE-----EEeeeccceeEEEEec-------CCCcEEEEeecCCeEEEEECCCcceeee
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVR-----HFYGHGHAINELKFHP-------QDFNLLLSVSKDHTLRLWNIKTDICIAI 94 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~-----~~~~~~~~v~~~~~~~-------~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 94 (291)
.++|+++.|++|+|||.++++... .+.+|.+.|.+++|+| .++++||+|+.|++|+|||+.++.++..
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 489999999999999998876543 3468999999999987 3678999999999999999988877776
Q ss_pred eccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc
Q psy10348 95 FGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN 173 (291)
Q Consensus 95 ~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (291)
+ ..|..+|.+++|+|++. +|++++.|++|++||+++++.............. ..+..............+|..
T Consensus 182 ~---~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 182 G---YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP---WLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp E---EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC---CSEEEESGGGC------CCSS
T ss_pred e---cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc---eEEecccccceeeeecccccc
Confidence 6 58899999999999875 7999999999999999988765443321111000 000000000011122346888
Q ss_pred ceeEEEEc---CCEEEEecCCCeEEEecCCCCCcccccc-CCCce------eeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 174 YVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRT-NETNV------TIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 174 ~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
.+.++.|. +..+++++.|+++++||+.......... ..... ............ ....+.+.+++.++++
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL-LGACPHPRYMDYFATA 334 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCS-SCCEECSSCTTEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc-eeEEEccCCCCEEEEE
Confidence 99999996 7799999999999999997764421110 00000 001111111111 1123444445678888
Q ss_pred EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|+.||.|++||+.+++... ... +|..+|++++|||||++||+
T Consensus 335 gs~Dg~V~lwd~~~~~~~~---~~~---~~~~~V~svafspdG~~LA~ 376 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDSNS---IPI---QLGMPIVDFCWHQDGSHLAI 376 (393)
T ss_dssp ETTTTEEEEEETTCTTCCE---EEE---ECSSCEEEEEECTTSSEEEE
T ss_pred ECCCCEEEEEECCCCcEEE---Eec---CCCCcEEEEEEcCCCCEEEE
Confidence 9999999999999886432 222 46679999999999999984
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-35 Score=240.09 Aligned_cols=251 Identities=15% Similarity=0.212 Sum_probs=188.7
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
..+....|+|++ .+|++|+.||.|++||+++++....+.+|...|.+++|+| ++.+|++|+.|+.|++||+.+++
T Consensus 98 ~~~~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 98 DYTAVDTAKLQM----RRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp CEEEEEEECSSS----CEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEEecCC----CEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCc
Confidence 445555778888 5999999999999999999998888889999999999999 88999999999999999999999
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
.+..+ .+|...|.+++|+|++++|++++.|+.|++||+++++....+..............+.. .. .......
T Consensus 173 ~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~--~~~~~~~ 245 (420)
T 3vl1_A 173 NPRTL---IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFV--GT--DRQLHEI 245 (420)
T ss_dssp CCEEE---ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEE--CC--CSSCGGG
T ss_pred CceEE---cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEec--CC--cceeeec
Confidence 88888 78999999999999999999999999999999999887665542111000000000000 00 0001122
Q ss_pred cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEEcCC
Q psy10348 171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVGNQS 247 (291)
Q Consensus 171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~~d 247 (291)
+...+.+++|+ +++|++++.||.|++||+++.+.. ......+...+..++++ |++. +|++|+.|
T Consensus 246 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~~v~~~~~~--~~~~~~l~~g~~d 312 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT-----------IQLPSKFTCSCNSLTVD--GNNANYIYAGYEN 312 (420)
T ss_dssp CCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE-----------EEECCTTSSCEEEEEEC--SSCTTEEEEEETT
T ss_pred ccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee-----------EEcccccCCCceeEEEe--CCCCCEEEEEeCC
Confidence 45667777777 679999999999999999887542 22333466677766654 6688 99999999
Q ss_pred CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 248 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|.|++||+.+++.. ...+.. .|...|.++.| +++++|++
T Consensus 313 g~i~vwd~~~~~~~---~~~~~~-~~~~~v~~~~~-~~~~~l~s 351 (420)
T 3vl1_A 313 GMLAQWDLRSPECP---VGEFLI-NEGTPINNVYF-AAGALFVS 351 (420)
T ss_dssp SEEEEEETTCTTSC---SEEEEE-STTSCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEcCCCcCc---hhhhhc-cCCCCceEEEe-CCCCEEEE
Confidence 99999999987532 123321 35678888855 57777764
No 64
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=257.56 Aligned_cols=241 Identities=17% Similarity=0.206 Sum_probs=197.0
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL 81 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i 81 (291)
...|.+.|++++|+|++ ++|++|+.||.|+|||+. +++.+..+.+|.++|.+++|+| + +.+|++|+.||.|
T Consensus 5 l~gH~~~V~~l~~s~dg----~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKV 79 (753)
T ss_dssp ---CCCCEEEECCCSSS----CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCE
T ss_pred cccCcceeEEEEECCCC----CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeE
Confidence 34689999999999998 499999999999999997 5677888999999999999998 5 8999999999999
Q ss_pred EEEECCCcc--eeeeeccccCCCCceEEEEEccC--CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 82 RLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLL--GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 82 ~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
++||+.+++ .+..+ .+|...|.+++|+|+ ++.+++|+.||.|++||++++......
T Consensus 80 ~vwd~~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~----------------- 139 (753)
T 3jro_A 80 LIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI----------------- 139 (753)
T ss_dssp EEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-----------------
T ss_pred EEEECCCCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-----------------
Confidence 999999876 45555 789999999999999 999999999999999999887432211
Q ss_pred ccccCcccccccccCcceeEEEEcC---------------CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWLG---------------DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF 222 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
....|...|.++.|++ +++++|+.||.|++||++..... ......+..
T Consensus 140 ---------~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~--------~~~~~~~~~ 202 (753)
T 3jro_A 140 ---------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------YVLESTLEG 202 (753)
T ss_dssp ---------EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE--------EEEEEEECC
T ss_pred ---------EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc--------ceeeeeecC
Confidence 1234888999999973 58999999999999999876321 133567778
Q ss_pred CcccEEEEEEEecCC---CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 223 KDCEIWFIRFSMDYW---QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 223 ~~~~i~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|...|..+++ +|+ +.+|++|+.||.|++||+.+++... .........|...|++++|+|+|++|++
T Consensus 203 h~~~V~~l~~--sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-~~~~~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 203 HSDWVRDVAW--SPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp CSSCEEEEEE--CCCCSSSEEEEEEESSSCEEEEEESSSSSCC-BCCBSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred CCCcEEEEEe--ccCCCCCCEEEEEecCCEEEEecCCCCCCcc-eeEEeccCCCCCceEEEEEcCCCCEEEE
Confidence 8888877655 477 8999999999999999999874321 1122333467889999999999998874
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=234.76 Aligned_cols=235 Identities=17% Similarity=0.242 Sum_probs=186.9
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
|.+.|++++|+|++ .+|++++.||.|++|| .+++.+..+..|...|.+++|+| ++.+|++++.||.|++||+.+
T Consensus 107 ~~~~v~~~~~s~~~----~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 107 TTNQVTCLAWSHDG----NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp -CBCEEEEEECTTS----SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTT
T ss_pred CCCceEEEEEcCCC----CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCC
Confidence 56799999999998 5999999999999999 67888899999999999999999 889999999999999999987
Q ss_pred cceeeeec-----------------------------------------------------cccCCCCceEEEEEccCCC
Q psy10348 89 DICIAIFG-----------------------------------------------------GVEGHRDEVLSADFDLLGT 115 (291)
Q Consensus 89 ~~~~~~~~-----------------------------------------------------~~~~~~~~i~~~~~~~~~~ 115 (291)
++.+..+. .+..|...|.+++|+|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK 260 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC
Confidence 76554331 1235667788888888888
Q ss_pred EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeE
Q psy10348 116 KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCI 194 (291)
Q Consensus 116 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i 194 (291)
+|++++.|+.|++||+++++....+ ..|...|.+++|+ ..++++++.|+.|
T Consensus 261 ~l~~~~~d~~i~i~d~~~~~~~~~~----------------------------~~~~~~i~~~~~~~~~~l~~~~~d~~i 312 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNGNSQNCF----------------------------YGHSQSIVSASWVGDDKVISCSMDGSV 312 (425)
T ss_dssp EEEEEETTSCEEEECSSSBSCSEEE----------------------------CCCSSCEEEEEEETTTEEEEEETTSEE
T ss_pred EEEEEcCCCEEEEEECCCCccceEe----------------------------cCCCccEEEEEECCCCEEEEEeCCCcE
Confidence 8888888888888887776544333 3488899999998 3399999999999
Q ss_pred EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce----------
Q psy10348 195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK---------- 264 (291)
Q Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---------- 264 (291)
++||+++.+ .+..+..+...+..+++ +|++++|++++.||.|++||+.+++.....
T Consensus 313 ~i~d~~~~~------------~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 378 (425)
T 1r5m_A 313 RLWSLKQNT------------LLALSIVDGVPIFAGRI--SQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN 378 (425)
T ss_dssp EEEETTTTE------------EEEEEECTTCCEEEEEE--CTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred EEEECCCCc------------EeEecccCCccEEEEEE--cCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence 999998874 36777777777776655 466999999999999999999876410000
Q ss_pred ----eEEEecccccc--ceeeeEEccCCceeeC
Q psy10348 265 ----FQILSHPRCMS--AVRQTTLSKNGNVLLC 291 (291)
Q Consensus 265 ----~~~~~~~~~~~--~v~~~~~s~~g~~l~s 291 (291)
........|.. .|++++|+|++++|++
T Consensus 379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 411 (425)
T 1r5m_A 379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKISV 411 (425)
T ss_dssp CEECCEEEEECCTTCCCCEEEEEECTTSSEEEE
T ss_pred cccchhhhhhcCcccCCceEEEEccCCCceEEE
Confidence 02223345655 9999999999999874
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6e-34 Score=234.33 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=193.1
Q ss_pred eecce-eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 8 LIEEN-FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 8 ~~~~~-i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
.|.+. +.++.+ ++ .+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++ +|++|+.||+|++||+
T Consensus 119 ~h~~~v~~~~~~--~~----~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 119 GHMTSVITCLQF--ED----NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp CCSSSCEEEEEE--ET----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEET
T ss_pred CCCCCcEEEEEE--CC----CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEEC
Confidence 45555 455555 44 4999999999999999999999999999999999999998 65 9999999999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEc--cCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFD--LLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
++++.+..+ .+|...|.+++|+ +++.++++++.||.|++||++++........... ..............
T Consensus 191 ~~~~~~~~~---~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 191 KKGCCTHVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHD-----YPLVFHTPEENPYF 262 (464)
T ss_dssp TTTEEEEEE---CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CC-----SSEEESCGGGCTTE
T ss_pred CCCcEEEEE---CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCC-----cceEeeccCCCeEE
Confidence 999988888 7899999999998 5778999999999999999998765433221100 00000011111112
Q ss_pred cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
.....+|...+.++..+++++++++.|+.|++||+++.+ .+..+.+|...+..+++. |++++|++|
T Consensus 263 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~------------~~~~~~~~~~~v~~~~~~--~~~~~l~sg 328 (464)
T 3v7d_B 263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK------------CLYILSGHTDRIYSTIYD--HERKRCISA 328 (464)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE------------EEEEECCCSSCEEEEEEE--TTTTEEEEE
T ss_pred EEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc------------EEEEecCCCCCEEEEEEc--CCCCEEEEE
Confidence 344567999999998889999999999999999998873 477888888888877766 559999999
Q ss_pred cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 245 NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 245 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+.||.|++||+.+++. .....+|...|.+++|++ ++|+
T Consensus 329 ~~dg~i~vwd~~~~~~------~~~~~~h~~~v~~~~~~~--~~l~ 366 (464)
T 3v7d_B 329 SMDTTIRIWDLENGEL------MYTLQGHTALVGLLRLSD--KFLV 366 (464)
T ss_dssp ETTSCEEEEETTTTEE------EEEECCCSSCEEEEEECS--SEEE
T ss_pred eCCCcEEEEECCCCcE------EEEEeCCCCcEEEEEEcC--CEEE
Confidence 9999999999998742 223347889999999984 5554
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-35 Score=237.53 Aligned_cols=234 Identities=14% Similarity=0.162 Sum_probs=186.6
Q ss_pred eecceeEEEEeeeccCCCC---CEEEEecCCCeEEEEccCCcce-----eEEEeee-----ccceeEEEEe----cCCCc
Q psy10348 8 LIEENFYTCAWSMDLESGR---PLLAVAGSRAVIRIFSPAFHAC-----VRHFYGH-----GHAINELKFH----PQDFN 70 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~---~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~ 70 (291)
.|...|++++|+|+.+.++ .+|++++.||.|++|++.+++. +..+..| ...|.+++|+ | ++.
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~ 138 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLS 138 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----C
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCc
Confidence 5789999999999922222 3999999999999999998887 8888888 5999999999 9 888
Q ss_pred E-EEEeecCCeEEEEECCC------cceee-----eecc----ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348 71 L-LLSVSKDHTLRLWNIKT------DICIA-----IFGG----VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP 134 (291)
Q Consensus 71 ~-l~s~~~dg~i~vwd~~~------~~~~~-----~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 134 (291)
+ |++++.||.|++||+.+ ++.+. .+.. ...|...|.+++|+|++ +|++++.||.|++||++++
T Consensus 139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 217 (397)
T 1sq9_A 139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL 217 (397)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT
T ss_pred eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC
Confidence 8 99999999999999998 66555 4410 02488999999999999 9999999999999999987
Q ss_pred hhhhhhccccccCCCCccccccCccccCccccccccc---CcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccc
Q psy10348 135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH---RNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKE 206 (291)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~ 206 (291)
+.+..+.. ...| ...|.+++|+ +++|++++.| +.|++||+++.+.
T Consensus 218 ~~~~~~~~-------------------------~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~-- 270 (397)
T 1sq9_A 218 RPLYNFES-------------------------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER-- 270 (397)
T ss_dssp EEEEEEEC-------------------------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE--
T ss_pred ceeEEEec-------------------------cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc--
Confidence 75544321 0116 8889999998 7899999999 9999999988744
Q ss_pred cccCCCceeeeeeecC-------------CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec---
Q psy10348 207 LRTNETNVTIINRLNF-------------KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH--- 270 (291)
Q Consensus 207 ~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--- 270 (291)
+..+.. |...+..++++ |++++|++++.||.|++||+.+++.+ ..+..
T Consensus 271 ----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~ 334 (397)
T 1sq9_A 271 ----------IGSLSVPTHSSQASLGEFAHSSWVMSLSFN--DSGETLCSAGWDGKLRFWDVKTKERI----TTLNMHCD 334 (397)
T ss_dssp ----------EEEECBC--------CCBSBSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTTTEEE----EEEECCGG
T ss_pred ----------cceeccCcccccccccccccCCcEEEEEEC--CCCCEEEEEeCCCeEEEEEcCCCcee----EEEecccC
Confidence 566666 77777766555 66999999999999999999987532 33331
Q ss_pred -ccc---------------ccceeeeEEccCC
Q psy10348 271 -PRC---------------MSAVRQTTLSKNG 286 (291)
Q Consensus 271 -~~~---------------~~~v~~~~~s~~g 286 (291)
..| ..+|++++|+|+|
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 335 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cccchhhhhccccccccccCCceeEEEecccc
Confidence 044 8899999999998
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=232.38 Aligned_cols=240 Identities=14% Similarity=0.137 Sum_probs=185.0
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEE-eeeccceeEEEEecCC--CcEEEEeecCCe
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQD--FNLLLSVSKDHT 80 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~l~s~~~dg~ 80 (291)
..|.+.|++++|+|++. .++++|+. ||.|++||+.+++..... .+|..+|.+++|+|+. +.+|++|+.||.
T Consensus 15 ~~h~~~v~~~~~~p~~~---~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSA---KFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EECSSCEEEEEECTTSS---EEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred cCCCCceEEEEEcCCCc---eEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 34889999999999885 46667766 999999999988765443 3799999999999932 799999999999
Q ss_pred EEEEECCCcc-eeeeeccccCCCCceEEEEE------ccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCcc
Q psy10348 81 LRLWNIKTDI-CIAIFGGVEGHRDEVLSADF------DLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARST 152 (291)
Q Consensus 81 i~vwd~~~~~-~~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~ 152 (291)
|++||+.+++ .+..+ .+|...|.+++| +|++++|++++.||.|++||+++++ ....+...
T Consensus 92 i~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--------- 159 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSV---KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV--------- 159 (357)
T ss_dssp EEEECTTSCSSCSEEE---CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC---------
T ss_pred EEEEeCCCCCccEEEE---EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc---------
Confidence 9999999887 77777 789999999955 6789999999999999999999876 33222110
Q ss_pred ccccCccccCcccccccccCcceeEEEE----c--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348 153 RPFDTQKEHFPQFSTRDIHRNYVDCVRW----L--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE 226 (291)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
...+...+.+++| + ++++++++.|+.|++||+++.+. . ....+...
T Consensus 160 ---------------~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~-~~~~~~~~ 211 (357)
T 3i2n_A 160 ---------------QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL------------R-WETNIKNG 211 (357)
T ss_dssp ---------------TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE------------E-EEEECSSC
T ss_pred ---------------CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce------------e-eecCCCCc
Confidence 0012347888884 3 78999999999999999988643 2 22345566
Q ss_pred EEEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348 227 IWFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL 290 (291)
Q Consensus 227 i~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 290 (291)
+..+++++.. ++.+|++|+.||.|++||+.+++..... ......+|...|++++|+|+++ +|+
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~ 276 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF-ASVSEKAHKSTVWQVRHLPQNRELFL 276 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE-EEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce-eeeccCCCcCCEEEEEECCCCCcEEE
Confidence 6665554310 6999999999999999999987655332 2223347889999999999998 565
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=241.01 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=180.6
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----------eeEEEeeec------------cceeEEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----------CVRHFYGHG------------HAINELK 63 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----------~~~~~~~~~------------~~v~~~~ 63 (291)
+.+.+.|++++|+|++ .+||+|+.||.|+|||+.+++ ....+.+|. +.|.+++
T Consensus 25 ~~~~~~V~~v~~s~~g----~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 25 VAEADIISTVEFNHSG----ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp CCGGGSEEEEEECSSS----SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred ccccCcEEEEEECCCC----CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 4568999999999998 499999999999999998876 577888998 8899999
Q ss_pred EecCCC--cEEEEeecCCeEEEEECCCcceee---------------------------------------eeccccCCC
Q psy10348 64 FHPQDF--NLLLSVSKDHTLRLWNIKTDICIA---------------------------------------IFGGVEGHR 102 (291)
Q Consensus 64 ~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~---------------------------------------~~~~~~~~~ 102 (291)
|+| ++ .+|++++.|+.|++||+.++.... .+ ..+|.
T Consensus 101 ~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~ 177 (447)
T 3dw8_B 101 WLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF--ANAHT 177 (447)
T ss_dssp ECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE--CSCCS
T ss_pred EcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe--ccCCC
Confidence 999 66 799999999999999997654321 11 25799
Q ss_pred CceEEEEEccCCCEEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc
Q psy10348 103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL 181 (291)
Q Consensus 103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 181 (291)
..|.+++|+|++++|++| .|+.|++||+++.. ....+.. . ......|...|.+++|+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~----~-----------------~~~~~~~~~~v~~~~~~ 235 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDI----K-----------------PANMEELTEVITAAEFH 235 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC----C-----------------CSSGGGCCCCEEEEEEC
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeec----c-----------------cccccccCcceEEEEEC
Confidence 999999999999999998 79999999998433 2221100 0 01224588999999998
Q ss_pred --C-CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc------------cEEEEEEEecCCCcEEEEEcC
Q psy10348 182 --G-DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC------------EIWFIRFSMDYWQKILAVGNQ 246 (291)
Q Consensus 182 --~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~~~~~~~~~~~~l~~~~~ 246 (291)
+ ++|++++.|+.|++||+++..... ..+..+..+.. .+..+++ +|++++|++++.
T Consensus 236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~ 305 (447)
T 3dw8_B 236 PNSCNTFVYSSSKGTIRLCDMRASALCD--------RHSKLFEEPEDPSNRSFFSEIISSISDVKF--SHSGRYMMTRDY 305 (447)
T ss_dssp SSCTTEEEEEETTSCEEEEETTTCSSSC--------TTCEEECCC-----CCHHHHHTTCEEEEEE--CTTSSEEEEEES
T ss_pred CCCCcEEEEEeCCCeEEEEECcCCcccc--------ceeeEeccCCCccccccccccCceEEEEEE--CCCCCEEEEeeC
Confidence 4 799999999999999998875310 01344444443 6666555 567999999999
Q ss_pred CCcEEEEEcCC-CCCCcceeEEEecccccc---------------ceeeeEEccCCceeeC
Q psy10348 247 SGRTYVWDLDV-QDPSSIKFQILSHPRCMS---------------AVRQTTLSKNGNVLLC 291 (291)
Q Consensus 247 dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~---------------~v~~~~~s~~g~~l~s 291 (291)
|.|++||+.+ ++++. .+. .|.. .+.+++|+|+|++|++
T Consensus 306 -~~v~iwd~~~~~~~~~----~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s 359 (447)
T 3dw8_B 306 -LSVKVWDLNMENRPVE----TYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMT 359 (447)
T ss_dssp -SEEEEEETTCCSSCSC----CEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEE
T ss_pred -CeEEEEeCCCCccccc----eee--ccccccccccccccccccccceEEEECCCCCEEEE
Confidence 9999999987 54432 222 2322 1334999999999874
No 70
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=223.21 Aligned_cols=227 Identities=18% Similarity=0.232 Sum_probs=172.8
Q ss_pred eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
.++++||+++ +||+|. |++|+|||++++++++.++ +|...|++++|+| ++++|++|+.||+|++||+++++
T Consensus 28 ~~~l~WS~~~-----~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-----VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTTS-----EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEECCCC-----EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCce
Confidence 4679999875 888775 8999999999999888775 5778899999999 99999999999999999999887
Q ss_pred eeeeec--------------------------------------cccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc
Q psy10348 91 CIAIFG--------------------------------------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132 (291)
Q Consensus 91 ~~~~~~--------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~ 132 (291)
.+..+. .+.+|...+..+.+++++++|++++.|+.|++||++
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 655441 124567777888888888888888888888888888
Q ss_pred CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CC--EEEEecCCCeEEEecCCCCCcccc
Q psy10348 133 KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GD--FVLSKSCENCIICWKPGRLEDKEL 207 (291)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~l~~~~~d~~i~iwd~~~~~~~~~ 207 (291)
+++..... ......+...|.++.+. ++ .+++++.+++|++||......
T Consensus 181 ~~~~~~~~------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~--- 233 (318)
T 4ggc_A 181 PGEGGWVP------------------------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--- 233 (318)
T ss_dssp CBTTBSCC------------------------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---
T ss_pred CCcccccc------------------------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---
Confidence 76643221 11223467788899887 33 345778899999999987643
Q ss_pred ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE--cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC
Q psy10348 208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG--NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN 285 (291)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 285 (291)
... ..+...+..+.+. |++..++++ +.||.|++||+.++++ ... ..+|.+.|++++|+||
T Consensus 234 ---------~~~-~~~~~~v~~~~~~--~~~~~~~~~sg~~d~~i~iwd~~~~~~----~~~--l~gH~~~V~~l~~spd 295 (318)
T 4ggc_A 234 ---------LSA-VDAHSQVCSILWS--PHYKELISGHGFAQNQLVIWKYPTMAK----VAE--LKGHTSRVLSLTMSPD 295 (318)
T ss_dssp ---------EEE-EECSSCEEEEEEE--TTTTEEEEEECTTTCCEEEEETTTCCE----EEE--ECCCSSCEEEEEECTT
T ss_pred ---------ccc-ccceeeeeeeeec--ccccceEEEEEcCCCEEEEEECCCCcE----EEE--EcCCCCCEEEEEEcCC
Confidence 222 2344456666555 447766654 4899999999998853 233 3479999999999999
Q ss_pred CceeeC
Q psy10348 286 GNVLLC 291 (291)
Q Consensus 286 g~~l~s 291 (291)
|++||+
T Consensus 296 g~~l~S 301 (318)
T 4ggc_A 296 GATVAS 301 (318)
T ss_dssp SSCEEE
T ss_pred CCEEEE
Confidence 999985
No 71
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=238.75 Aligned_cols=236 Identities=12% Similarity=0.195 Sum_probs=190.5
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc------eeEE---EeeeccceeEEEEecCCCcEEEEeecC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA------CVRH---FYGHGHAINELKFHPQDFNLLLSVSKD 78 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~------~~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~d 78 (291)
.|...|++++|+|++. .+|++++.||.|++||+.+++ .... +..|...|.+++|+|+++.+|++++.|
T Consensus 111 ~h~~~v~~~~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 187 (416)
T 2pm9_A 111 NHSSSVKTVKFNAKQD---NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS 187 (416)
T ss_dssp CSSSCCCEEEECSSST---TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS
T ss_pred CCccceEEEEEcCCCC---CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC
Confidence 4789999999999832 599999999999999999876 3332 367899999999999438999999999
Q ss_pred CeEEEEECCCcceeeeeccccCC------CCceEEEEEccCC-CEEEEEecCC---cEEEEeccCch-hhhhhccccccC
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGH------RDEVLSADFDLLG-TKIMSCGMDH---SLKLWDLTKPE-IKDACAESYTFN 147 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~d~---~i~v~d~~~~~-~~~~~~~~~~~~ 147 (291)
|.|++||+++++.+..+ ..+ ...|.+++|+|++ .++++++.|+ .|++||++++. ....
T Consensus 188 g~v~iwd~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~-------- 256 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHL---SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT-------- 256 (416)
T ss_dssp SCEEEEETTTTEEEEEE---CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC--------
T ss_pred CCEEEEECCCCCcceEE---eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE--------
Confidence 99999999999888877 344 7899999999997 5899999998 99999998863 2221
Q ss_pred CCCccccccCccccCccccccc-ccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRD-IHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
.. +|...|.+++|+ +++|++++.|+.|++||+++.+. +..+..|
T Consensus 257 --------------------~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~------------~~~~~~~ 304 (416)
T 2pm9_A 257 --------------------LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ------------LSQFPAR 304 (416)
T ss_dssp --------------------CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE------------EEEEECS
T ss_pred --------------------eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc------------ceeecCC
Confidence 12 488999999996 57999999999999999988744 7778888
Q ss_pred cccEEEEEEEecCCC-cEEEEEcCCCcEEEEEcCCCCCCcceeE-----------EEec------------------ccc
Q psy10348 224 DCEIWFIRFSMDYWQ-KILAVGNQSGRTYVWDLDVQDPSSIKFQ-----------ILSH------------------PRC 273 (291)
Q Consensus 224 ~~~i~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~------------------~~~ 273 (291)
...+..++|+ |++ .+|++++.||.|++||+.+......... .+.. ..|
T Consensus 305 ~~~v~~~~~s--~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (416)
T 2pm9_A 305 GNWCFKTKFA--PEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWY 382 (416)
T ss_dssp SSCCCCEEEC--TTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTT
T ss_pred CCceEEEEEC--CCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccc
Confidence 8888776655 668 8999999999999999998764322110 0111 115
Q ss_pred ccceeeeEEccCCceeeC
Q psy10348 274 MSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 274 ~~~v~~~~~s~~g~~l~s 291 (291)
..++.+++|+|||++|++
T Consensus 383 ~~~~~~~~~s~dg~~la~ 400 (416)
T 2pm9_A 383 GEPSPAAHWAFGGKLVQI 400 (416)
T ss_dssp CCCSCCCEEETTTEEECB
T ss_pred cCCccceEEeeCCeEEEE
Confidence 678889999999999974
No 72
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-33 Score=229.07 Aligned_cols=229 Identities=18% Similarity=0.280 Sum_probs=185.5
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ .+||+|+.||.|+|||+++++.+..+.+|...+.++.+++ .+|++|+.|+.+++||..
T Consensus 145 ~~~~~V~sv~fspdg----~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 145 QPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp STTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETT
T ss_pred CCCCcEEEEEECCCC----CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeec
Confidence 356789999999998 4999999999999999999999999999999999988765 799999999999999988
Q ss_pred Ccc-eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 88 TDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 88 ~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
... .+..+ .+|...+..+.|+|++.++++++.|+.+++||..+++.... ...
T Consensus 218 ~~~~~~~~~---~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~------------------------~~~ 270 (420)
T 4gga_A 218 VAEHHVATL---SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV------------------------PLQ 270 (420)
T ss_dssp SSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC------------------------CSE
T ss_pred ccceeeEEe---cccccceeeeeecCCCCeeeeeeccccceEEeeccccccce------------------------eee
Confidence 654 44455 78999999999999999999999999999999987763211 112
Q ss_pred cccccCcceeEEEEc---CCEEEE--ecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 167 TRDIHRNYVDCVRWL---GDFVLS--KSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~---~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
....|...|.+++|+ ++++++ |+.|++|++||+.++.. +..+..+. .+..+.+ +|+++.+
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~------------~~~~~~~~-~v~~~~~--~~~~~~l 335 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC------------LSAVDAHS-QVCSILW--SPHYKEL 335 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE------------EEEEECSS-CEEEEEE--ETTTTEE
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc------------ceeecccc-ceeeeee--cCCCCeE
Confidence 224588899999998 445554 56799999999998744 55555444 3444444 4668888
Q ss_pred EEEc--CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 242 AVGN--QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 242 ~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++ .||.|+|||+.++++ .....+|.+.|++++|+|||++|++
T Consensus 336 v~~sg~~d~~I~iwd~~~~~~------v~~l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMAK------VAELKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp EEEECTTTCCEEEEETTTCCE------EEEECCCSSCEEEEEECTTSSCEEE
T ss_pred EEEEecCCCEEEEEECCCCcE------EEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 7654 799999999998853 2233489999999999999999985
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=238.89 Aligned_cols=248 Identities=12% Similarity=0.193 Sum_probs=179.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee---------------------------------------EE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV---------------------------------------RH 51 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~---------------------------------------~~ 51 (291)
+.|++++|+|+++ ..+|++++.||.|++||+.+++.. ..
T Consensus 94 ~~V~~l~~~~~~~--~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
T 3dw8_B 94 EKINKIRWLPQKN--AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI 171 (447)
T ss_dssp CCCCEEEECCCCS--SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCCC--cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence 7899999999862 128999999999999998764432 12
Q ss_pred -EeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-cceeeee----ccccCCCCceEEEEEccCC-CEEEEEecCC
Q psy10348 52 -FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-DICIAIF----GGVEGHRDEVLSADFDLLG-TKIMSCGMDH 124 (291)
Q Consensus 52 -~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~----~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~ 124 (291)
..+|...|.+++|+| ++++|++| .|+.|++||+++ ++....+ ..+.+|...|.+++|+|++ .+|++|+.||
T Consensus 172 ~~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 172 FANAHTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp ECSCCSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred eccCCCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 257999999999999 89999998 799999999984 3343321 0236899999999999998 8999999999
Q ss_pred cEEEEeccCchhh----hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEec
Q psy10348 125 SLKLWDLTKPEIK----DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWK 198 (291)
Q Consensus 125 ~i~v~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd 198 (291)
.|++||+++++.. ..+.... . .........|...|.+++|+ +++|++++. +.|++||
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~----~------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPE----D------------PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD 312 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC---------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred eEEEEECcCCccccceeeEeccCC----C------------ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence 9999999988752 2221100 0 00001112345589999998 779999998 9999999
Q ss_pred CCC-CCccccccCCCceeeeeeecCCcccEE-------------EEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcce
Q psy10348 199 PGR-LEDKELRTNETNVTIINRLNFKDCEIW-------------FIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIK 264 (291)
Q Consensus 199 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~-------------~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 264 (291)
++. .+. +..+..|...+. ...++++|++++|++|+.||.|++||+.+++.+...
T Consensus 313 ~~~~~~~------------~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 313 LNMENRP------------VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TTCCSSC------------SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred CCCCccc------------cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 986 433 444554432111 112566788999999999999999999987532100
Q ss_pred e--------------------------EEEeccccccceeeeEEccCCceeeC
Q psy10348 265 F--------------------------QILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 265 ~--------------------------~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
. .......+...|.+++|+|+|++||+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~ 433 (447)
T 3dw8_B 381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAV 433 (447)
T ss_dssp CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEE
T ss_pred ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEE
Confidence 0 00001134567899999999999874
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.4e-34 Score=262.14 Aligned_cols=240 Identities=17% Similarity=0.299 Sum_probs=198.6
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|++++|+|++ +++++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++++|++++.||.|++||+.
T Consensus 613 ~h~~~v~~~~~s~~~----~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDG----QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred cccccEEEEEECCCC----CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECC
Confidence 588999999999998 5999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+++.+..+ .+|...|.+++|+| ++.++++++.|+.|++||+++++....+
T Consensus 688 ~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~------------------------- 739 (1249)
T 3sfz_A 688 TGKLVHTY---DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM------------------------- 739 (1249)
T ss_dssp TCCEEEEE---ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-------------------------
T ss_pred CCceEEEE---cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-------------------------
Confidence 99999888 78999999999999 4568999999999999999988765443
Q ss_pred ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccC------------------------C--------
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTN------------------------E-------- 211 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------------------------~-------- 211 (291)
.+|...|.+++|+ ++++++++.||.|++||+.+......... .
T Consensus 740 ---~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 816 (1249)
T 3sfz_A 740 ---FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA 816 (1249)
T ss_dssp ---CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred ---cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence 3489999999998 77999999999999999876643211000 0
Q ss_pred ----------Cceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeee
Q psy10348 212 ----------TNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQT 280 (291)
Q Consensus 212 ----------~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 280 (291)
.....+..+ ..+...+..+++ +|++.++++++.||.|++||+.++. ......+|.+.|.++
T Consensus 817 ~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~~dg~v~vwd~~~~~------~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 817 AKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF--SPYDHLAVIALSQYCVELWNIDSRL------KVADCRGHLSWVHGV 888 (1249)
T ss_dssp ETTEEEEEETTTCCEEEEEECSSSSCCCEEEE--CSSTTEEEEECSSSCEEEEETTTTE------EEEEECCCSSCEEEE
T ss_pred cCCcEEEEEecCCCceeEEcCCCCCceEEEEE--cCCCCEEEEEeCCCeEEEEEcCCCc------eeeecCCCccceEEE
Confidence 000111111 245555655554 5679999999999999999999874 233345788999999
Q ss_pred EEccCCceeeC
Q psy10348 281 TLSKNGNVLLC 291 (291)
Q Consensus 281 ~~s~~g~~l~s 291 (291)
+|+|+|++|++
T Consensus 889 ~~spdg~~l~s 899 (1249)
T 3sfz_A 889 MFSPDGSSFLT 899 (1249)
T ss_dssp EECTTSSEEEE
T ss_pred EECCCCCEEEE
Confidence 99999998874
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=235.53 Aligned_cols=235 Identities=12% Similarity=0.153 Sum_probs=183.0
Q ss_pred eecceeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCC---cc---eeEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348 8 LIEENFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAF---HA---CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 8 ~~~~~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
.|.+.|++++|+| ++ .+|++|+.||+|+|||+.+ +. ....+ .|...|.+++|+| ++.+|++|+.||.
T Consensus 61 ~h~~~V~~~~~s~~~~----~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s~dg~ 134 (437)
T 3gre_A 61 NEPNSITSSAVSPGET----PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP-NFDAFAVSSKDGQ 134 (437)
T ss_dssp TTTSCEEEEEEECSSS----CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred CCCCceEEEEECCCCC----CEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC-CCCEEEEEeCCCE
Confidence 4679999999999 87 5999999999999999876 33 23333 5999999999999 8999999999999
Q ss_pred EEEEECC---Ccceeeeec-----c--ccC--CCCceEEEE--EccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348 81 LRLWNIK---TDICIAIFG-----G--VEG--HRDEVLSAD--FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 81 i~vwd~~---~~~~~~~~~-----~--~~~--~~~~i~~~~--~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
|++||+. +++....+. . +.. +...+.++. +++++.+|++++.|+.|++||+++++.+..+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---- 210 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN---- 210 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc----
Confidence 9999995 454443321 0 011 556677777 567899999999999999999999876654431
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec-CC
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-FK 223 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~ 223 (291)
..|...|.+++|+ +++|++++.||.|++||++..+ .+..+. .+
T Consensus 211 ----------------------~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~~~ 256 (437)
T 3gre_A 211 ----------------------SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV------------LIRSWSFGD 256 (437)
T ss_dssp ----------------------CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE------------EEEEEBCTT
T ss_pred ----------------------CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc------------EEEEEecCC
Confidence 1177899999998 7799999999999999999863 366665 56
Q ss_pred cccEEEEEEEec--CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec----------------------c--ccccce
Q psy10348 224 DCEIWFIRFSMD--YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH----------------------P--RCMSAV 277 (291)
Q Consensus 224 ~~~i~~~~~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------------~--~~~~~v 277 (291)
...|..+++++. |++.+|++|+.||.|++||+.+++.. ..+.. . .|...|
T Consensus 257 ~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 332 (437)
T 3gre_A 257 HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ----YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL 332 (437)
T ss_dssp CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE----EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE----EEEEcCCCCCccceecccccccccceecccccCCce
Confidence 667777766543 77899999999999999999987532 22220 1 267788
Q ss_pred eeeEEccCCceeeC
Q psy10348 278 RQTTLSKNGNVLLC 291 (291)
Q Consensus 278 ~~~~~s~~g~~l~s 291 (291)
++++|+ ++++|++
T Consensus 333 ~~l~~~-~~~~l~s 345 (437)
T 3gre_A 333 STISVS-NDKILLT 345 (437)
T ss_dssp CCEEEE-TTEEEEE
T ss_pred EEEEEC-CceEEEe
Confidence 999999 7777764
No 76
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-34 Score=224.18 Aligned_cols=227 Identities=22% Similarity=0.372 Sum_probs=182.5
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...|.+++|+|++ ++|++|+.||.|++||+++++.+..+.+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus 63 ~h~~~v~~~~~~~~~----~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 63 GHKLGISDVAWSSDS----NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred cCCCceEEEEEcCCC----CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECC
Confidence 578899999999998 4999999999999999999999999999999999999999 88999999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-------ccccCCCCccccccCccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-------SYTFNPARSTRPFDTQKE 160 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 160 (291)
+++.+..+ ..|..+|.+++|+|++++|++++.||.|++||+++++....+.. .+.+.|++..........
T Consensus 138 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
T 4ery_A 138 TGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 214 (312)
T ss_dssp TCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred CCEEEEEe---cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 99988888 78999999999999999999999999999999998876554321 345566554333222211
Q ss_pred cC--------cccccccccCcceeE--EEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348 161 HF--------PQFSTRDIHRNYVDC--VRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI 227 (291)
Q Consensus 161 ~~--------~~~~~~~~~~~~v~~--~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 227 (291)
.. .......+|.....+ ..+. +.++++|+.||.|++||+.+.+. +..+.+|...+
T Consensus 215 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~------------~~~~~~h~~~v 282 (312)
T 4ery_A 215 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI------------VQKLQGHTDVV 282 (312)
T ss_dssp EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE------------EEEECCCSSCE
T ss_pred eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh------------hhhhhccCCcE
Confidence 11 112233345443322 2332 67999999999999999988743 78888898887
Q ss_pred EEEEEEecCCCcEEEEEc--CCCcEEEEEcC
Q psy10348 228 WFIRFSMDYWQKILAVGN--QSGRTYVWDLD 256 (291)
Q Consensus 228 ~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~ 256 (291)
..+++ +|++.+|++++ .|+.|++|+..
T Consensus 283 ~~~~~--~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 283 ISTAC--HPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEE--CSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEee--cCcCCceEEEEccCCccEEEecCC
Confidence 76655 56699999987 69999999864
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=219.72 Aligned_cols=219 Identities=16% Similarity=0.183 Sum_probs=181.6
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
..|.+.|++++| |++ .+|++|+.||.|++||+.+++....+..|...|.+++|+| ++.+|++++.||.|++|++
T Consensus 15 ~~h~~~v~~~~~-~~~----~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDD----SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp CCCSSCEEEEEE-EET----TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred hCCCCCcEEEEe-cCC----CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEe
Confidence 357899999999 887 4999999999999999999999999999999999999999 8999999999999999998
Q ss_pred CCc---ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 87 KTD---ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 87 ~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
... +.+..+ .+|...|.++.| +++++++++.||.|++|| .++....
T Consensus 89 ~~~~~~~~~~~~---~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~------------------------ 137 (313)
T 3odt_A 89 FATSGEDPLYTL---IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYN------------------------ 137 (313)
T ss_dssp TCCTTSCC-CEE---CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEE------------------------
T ss_pred eecCCCCcccch---hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEe------------------------
Confidence 765 334444 789999999999 577999999999999999 3332222
Q ss_pred ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCc
Q psy10348 164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 239 (291)
...|...+.++.|. ++++++++.|+.|++||... ....+.. +...+..+++.++ +.
T Consensus 138 ----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--------------~~~~~~~~~~~~i~~~~~~~~--~~ 197 (313)
T 3odt_A 138 ----LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--------------VIKTFSGIHNDVVRHLAVVDD--GH 197 (313)
T ss_dssp ----EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--------------EEEEECSSCSSCEEEEEEEET--TE
T ss_pred ----cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--------------eEEEEeccCcccEEEEEEcCC--Ce
Confidence 23488889999985 77999999999999999432 2555665 7777888777754 77
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 289 (291)
+++++.||.|++||+.+++. ... ...|.+.|++++|+|++.++
T Consensus 198 -~~~~~~dg~i~i~d~~~~~~----~~~--~~~~~~~i~~~~~~~~~~l~ 240 (313)
T 3odt_A 198 -FISCSNDGLIKLVDMHTGDV----LRT--YEGHESFVYCIKLLPNGDIV 240 (313)
T ss_dssp -EEEEETTSEEEEEETTTCCE----EEE--EECCSSCEEEEEECTTSCEE
T ss_pred -EEEccCCCeEEEEECCchhh----hhh--hhcCCceEEEEEEecCCCEE
Confidence 99999999999999998752 222 33688899999999999544
No 78
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-34 Score=232.57 Aligned_cols=244 Identities=11% Similarity=0.006 Sum_probs=183.0
Q ss_pred eecceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccC--CcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPA--FHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLR 82 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 82 (291)
.|.+.|++++|+|++. +| ++|+.||.|++||+. +++.+..+. .|...|.+++|+| ++.+|++|+.||.|+
T Consensus 100 ~~~~~v~~~~~s~d~~----~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDES----RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVY 174 (450)
T ss_dssp CCCCCEEEEEECTTSS----EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred ccCCceEEEEEcCCCC----EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEE
Confidence 3455799999999984 75 899999999999999 888888886 5668899999999 899999999999999
Q ss_pred EEECCCcceee-eeccccCCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 83 LWNIKTDICIA-IFGGVEGHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 83 vwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
+|++.+++... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------------ 236 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------------------ 236 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE------------------
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee------------------
Confidence 99998877554 22223689999999999999 999999999999999999987754432
Q ss_pred cccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeee-------------eeecCCc
Q psy10348 159 KEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII-------------NRLNFKD 224 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 224 (291)
..+|...|.+++|+ +++|++++.|+.|++||+++++.............+ .......
T Consensus 237 ---------~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 237 ---------LFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp ---------CCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred ---------ecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 13488999999997 889999999999999999987643111000000000 0000112
Q ss_pred ccEEEEEEEecCCCcEEEEEc-CCCcEEEEEc--CCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348 225 CEIWFIRFSMDYWQKILAVGN-QSGRTYVWDL--DVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 289 (291)
..+ ..+.++|++++|++++ .|+.|++|++ ..+..+ ........+ +.|.+++|+|++.++
T Consensus 308 ~~v--~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l---~~~~~~~~~-~~v~~~~~~~~~~~v 369 (450)
T 2vdu_B 308 FAV--SKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDL---ALKQIITFP-YNVISLSAHNDEFQV 369 (450)
T ss_dssp CCE--EEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCE---EEEEEEECS-SCEEEEEEETTEEEE
T ss_pred EEE--EEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCce---eeccEeccC-CceEEEEecCCcEEE
Confidence 233 4456667899999998 8999999999 443221 122222244 789999999965444
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.6e-34 Score=226.77 Aligned_cols=218 Identities=11% Similarity=0.123 Sum_probs=173.7
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE--eeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF--YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.|...|.+++|+|++ .+|++++.||.|++||+++++....+ ..|...|.+++|+| ++.+|++++.||.|++||
T Consensus 50 ~h~~~v~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 50 EHNGQVTGVDWAPDS----NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICY 124 (372)
T ss_dssp CCSSCEEEEEEETTT----TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEE
T ss_pred CCCCcccEEEEeCCC----CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEE
Confidence 478999999999988 59999999999999999888755444 57889999999999 889999999999999999
Q ss_pred CCCcce---eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 86 IKTDIC---IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 86 ~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
++.+.. ...+ ...|...|.+++|+|++++|++++.||.|++||++......... ...+.......
T Consensus 125 ~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----------~~~~~~~~~~~ 192 (372)
T 1k8k_C 125 FEQENDWWVCKHI--KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA----------PTPWGSKMPFG 192 (372)
T ss_dssp EETTTTEEEEEEE--CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC----------CBTTBSCCCTT
T ss_pred ecCCCcceeeeee--ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc----------ccccccccchh
Confidence 988763 2222 15789999999999999999999999999999987543211100 01111111111
Q ss_pred cccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348 163 PQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (291)
........|...|.+++|+ +++|++++.|+.|++||+++.+. +..+..+...+..+++++ ++++
T Consensus 193 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~~~~~~~~~~v~~~~~~~--~~~~ 258 (372)
T 1k8k_C 193 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA------------VATLASETLPLLAVTFIT--ESSL 258 (372)
T ss_dssp CEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE------------EEEEECSSCCEEEEEEEE--TTEE
T ss_pred hheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce------------eEEEccCCCCeEEEEEec--CCCE
Confidence 2233344688999999997 77999999999999999988744 777788888888877775 4888
Q ss_pred EEEEcCCCcEEEEEcCC
Q psy10348 241 LAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 241 l~~~~~dg~i~vwd~~~ 257 (291)
|++| .||.|++|++.+
T Consensus 259 l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 259 VAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEE-TTSSCEEEEEET
T ss_pred EEEE-eCCeEEEEEccC
Confidence 8888 899999999988
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-33 Score=224.90 Aligned_cols=187 Identities=10% Similarity=-0.001 Sum_probs=145.0
Q ss_pred ceeEEEEecCCCcEEEE--eecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348 58 AINELKFHPQDFNLLLS--VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135 (291)
Q Consensus 58 ~v~~~~~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 135 (291)
.+.+++|+| |++++++ ++.|++|+|||+++++++..+ .|...|.+++|+|+|+++++++. +.+++|+..+++
T Consensus 135 ~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~----~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~ 208 (365)
T 4h5i_A 135 YTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEI----ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGS 208 (365)
T ss_dssp CEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEE----ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCC
T ss_pred CEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEe----CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCc
Confidence 367899999 8888765 457899999999999988887 57788999999999999999985 557777766665
Q ss_pred hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC----eEEEecCCCCCcccccc
Q psy10348 136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN----CIICWKPGRLEDKELRT 209 (291)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~ 209 (291)
..... ....|...|.+++|+ +.++++++.|+ .++.|++......
T Consensus 209 ~~~~~--------------------------~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~---- 258 (365)
T 4h5i_A 209 CIARK--------------------------TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS---- 258 (365)
T ss_dssp EEEEE--------------------------CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE----
T ss_pred ceeee--------------------------ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec----
Confidence 43211 113488889999998 77899988877 6888987665331
Q ss_pred CCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348 210 NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 210 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 289 (291)
......+..+...|.+++| +|+|++||+|+.|++|+|||+.++++ ...+ ..+|..+|++|+|||||++|
T Consensus 259 ----~~~~~~~~~~~~~V~~~~~--Spdg~~lasgs~D~~V~iwd~~~~~~----~~~~-~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 259 ----VLRSKQVTNRFKGITSMDV--DMKGELAVLASNDNSIALVKLKDLSM----SKIF-KQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp ----EEEEEEEESSCSCEEEEEE--CTTSCEEEEEETTSCEEEEETTTTEE----EEEE-TTSSSSCEEEEEECTTSCEE
T ss_pred ----ceeeeeecCCCCCeEeEEE--CCCCCceEEEcCCCEEEEEECCCCcE----EEEe-cCcccCCEEEEEECCCCCEE
Confidence 0224556777777776655 57799999999999999999998742 1221 24799999999999999999
Q ss_pred eC
Q psy10348 290 LC 291 (291)
Q Consensus 290 ~s 291 (291)
|+
T Consensus 328 aS 329 (365)
T 4h5i_A 328 AS 329 (365)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-34 Score=233.05 Aligned_cols=227 Identities=17% Similarity=0.265 Sum_probs=181.5
Q ss_pred EEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
..++++|+.. .++++++.||.|+||++.+. +.+..+.+|.+.|.+++|+|.++.+|++|+.||.|++||+.++
T Consensus 38 ~~~~~~~~~~---~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 38 GFCAVNPKFM---ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSEEECSSEE---EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CcEEECCCeE---EEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3577888763 34556789999999998654 2345677899999999999977899999999999999999987
Q ss_pred -------ceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 90 -------ICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 90 -------~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
+.+..+ .+|...|.+++|+|++ .+|++++.|+.|++||+++++....+.
T Consensus 115 ~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------------- 171 (402)
T 2aq5_A 115 GLVLPLREPVITL---EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-------------------- 171 (402)
T ss_dssp CCSSCBCSCSEEE---ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC--------------------
T ss_pred CCccccCCceEEe---cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe--------------------
Confidence 455566 7899999999999998 699999999999999999887654431
Q ss_pred CcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCccc-EEEEEEEecCC
Q psy10348 162 FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCE-IWFIRFSMDYW 237 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~ 237 (291)
...|...|.+++|+ +++|++++.|+.|++||+++++. +..+ ..|... +..+ .++|+
T Consensus 172 ------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~ 231 (402)
T 2aq5_A 172 ------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV------------VAEKDRPHEGTRPVHA--VFVSE 231 (402)
T ss_dssp ------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE------------EEEEECSSCSSSCCEE--EECST
T ss_pred ------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce------------eeeeccCCCCCcceEE--EEcCC
Confidence 02488899999998 77999999999999999988743 5555 455543 4444 45577
Q ss_pred CcEEEEE---cCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 238 QKILAVG---NQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 238 ~~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+++|++| +.|+.|++||+.+.+... .... ..+...+.+++|+|++++|+
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPL---SLQE-LDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCS---EEEE-CCCCSSCEEEEEETTTTEEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCc---eEEe-ccCCCceeEEEEcCCCCEEE
Confidence 9999999 899999999999876421 2222 24567899999999999885
No 82
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.4e-34 Score=220.72 Aligned_cols=207 Identities=18% Similarity=0.260 Sum_probs=164.8
Q ss_pred eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348 8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL 81 (291)
Q Consensus 8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i 81 (291)
.|.++|++++|+++ + .+|++|+.||+|++||+++++ .+..+.+|...|.+++|+| + +.+|++++.|+.|
T Consensus 51 gH~~~V~~v~~s~~~~g----~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 51 GHEGPVWRVDWAHPKFG----TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPMLLVASSDGKV 125 (297)
T ss_dssp CCSSCEEEEEECCGGGC----SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEE
T ss_pred cccCCeEEEEecCCCcC----CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCc-CCCCcEEEEEECCCcE
Confidence 58899999999874 4 599999999999999998874 5667788999999999999 5 7899999999999
Q ss_pred EEEECCCcce--eeeeccccCCCCceEEEEEccC-------------CCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348 82 RLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLL-------------GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 82 ~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
++||++++.. ...+ .+|...|.+++|+|+ +++|++|+.|+.|++||+++++....
T Consensus 126 ~~wd~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~------- 195 (297)
T 2pm7_B 126 SVVEFKENGTTSPIII---DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV------- 195 (297)
T ss_dssp EEEEBCSSSCBCCEEE---ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-------
T ss_pred EEEEecCCCceeeeee---ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-------
Confidence 9999987642 2334 689999999999997 57999999999999999987652111
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEcC-----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG-----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL- 220 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 220 (291)
....+.+|...|.+++|++ .+|++++.|++|++||++..... .....+
T Consensus 196 -----------------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~---------~~~~~~~ 249 (297)
T 2pm7_B 196 -----------------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP---------WKKTLLK 249 (297)
T ss_dssp -----------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC---------CEEEESS
T ss_pred -----------------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc---------cceeeee
Confidence 1122346999999999983 58999999999999998764311 001112
Q ss_pred -cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 221 -NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 221 -~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
..+...++.++ ++|++++||+++.||.|++|+...
T Consensus 250 ~~~~~~~v~~~~--~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 250 EEKFPDVLWRAS--WSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSCCSSCEEEEE--ECSSSCCEEEEETTSCEEEEEECT
T ss_pred cccCCCcEEEEE--ECCCCCEEEEEcCCCcEEEEEECC
Confidence 34556666555 456799999999999999999874
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.4e-34 Score=231.59 Aligned_cols=227 Identities=19% Similarity=0.319 Sum_probs=189.5
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...|.+++| ++ .+|++|+.||.|++||+.+++.+..+.+|...|.+++|++ .++++|+.||.|++||+.
T Consensus 171 ~h~~~v~~l~~--~~----~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~ 241 (435)
T 1p22_A 171 GHTGSVLCLQY--DE----RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMA 241 (435)
T ss_dssp CCSSCEEEEEC--CS----SEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECS
T ss_pred CCCCcEEEEEE--CC----CEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCC
Confidence 47889999999 44 5999999999999999999999999999999999999976 599999999999999999
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
+++.......+.+|...|.+++| +++++++|+.||.|++||+++++.+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~--------------------------- 292 (435)
T 1p22_A 242 SPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTL--------------------------- 292 (435)
T ss_dssp SSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE---------------------------
T ss_pred CCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEE---------------------------
Confidence 88766332233789999999999 6889999999999999999988765544
Q ss_pred ccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348 168 RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247 (291)
Q Consensus 168 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 247 (291)
.+|...|.++.|+++++++|+.||.|++||+++++. +..+.+|...+..+++ ++.+|++|+.|
T Consensus 293 -~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~------------~~~~~~h~~~v~~~~~----~~~~l~sg~~d 355 (435)
T 1p22_A 293 -NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC------------LRVLEGHEELVRCIRF----DNKRIVSGAYD 355 (435)
T ss_dssp -ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCE------------EEEECCCSSCEEEEEC----CSSEEEEEETT
T ss_pred -cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCE------------EEEEeCCcCcEEEEEe----cCCEEEEEeCC
Confidence 348889999999999999999999999999998744 7788888888887665 48999999999
Q ss_pred CcEEEEEcCCCCCCcc---eeEEEeccccccceeeeEEccCCceeeC
Q psy10348 248 GRTYVWDLDVQDPSSI---KFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 248 g~i~vwd~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|.|++||+.+++.... ........+|.+.|.+++| ++++|++
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s 400 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVS 400 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEE
T ss_pred CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEE
Confidence 9999999976542111 0022233478899999999 6666653
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-33 Score=223.22 Aligned_cols=229 Identities=11% Similarity=0.212 Sum_probs=187.7
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-----CeEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-----HTLR 82 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~ 82 (291)
.|...|.+++|+|++ ++|++++.||.|++||+.+++.+..+. +...|.+++|+| ++.++++++.+ |.|+
T Consensus 72 ~h~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~ 145 (369)
T 3zwl_B 72 GHTGTIWSIDVDCFT----KYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSIN 145 (369)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEE
T ss_pred hcCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEE
Confidence 478999999999988 599999999999999999999988887 889999999999 89999999998 9999
Q ss_pred EEECCCcceeeee--------ccccCCCC--ceEEEEEccCCCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCCc
Q psy10348 83 LWNIKTDICIAIF--------GGVEGHRD--EVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPARS 151 (291)
Q Consensus 83 vwd~~~~~~~~~~--------~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~ 151 (291)
+||+..+.....+ ..+..|.. .+.+++|+|++++|++++.||.|++||+++ .+....+
T Consensus 146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------- 214 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI----------- 214 (369)
T ss_dssp EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE-----------
T ss_pred EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE-----------
Confidence 9999865422111 01134555 899999999999999999999999999987 4433332
Q ss_pred cccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEE
Q psy10348 152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF 229 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (291)
..|...|.+++|+ +++|++++.|+.|++||+++.+. +..+. +...+..
T Consensus 215 -----------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------~~~~~-~~~~~~~ 264 (369)
T 3zwl_B 215 -----------------DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV------------LKKYE-TDCPLNT 264 (369)
T ss_dssp -----------------ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE------------EEEEE-CSSCEEE
T ss_pred -----------------ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce------------eeeec-CCCCcee
Confidence 3488899999998 77999999999999999988754 44444 4444554
Q ss_pred EEEEecCCCcEEEEEcCCC--------------cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 230 IRFSMDYWQKILAVGNQSG--------------RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 230 ~~~~~~~~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++|+++++++++.++ .+++||+.+++. .. ...+|...|++++|+|+|++|++
T Consensus 265 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~--~~~~~~~~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 265 --AVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE----IG--RVQGHFGPLNTVAISPQGTSYAS 332 (369)
T ss_dssp --EEECSSSSEEEEEECCC-------------CEEEEEETTTCCE----EE--EEECCSSCEEEEEECTTSSEEEE
T ss_pred --EEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc----hh--heecccCcEEEEEECCCCCEEEE
Confidence 45567799999999988 899999998852 22 23478899999999999999874
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=231.05 Aligned_cols=250 Identities=11% Similarity=0.076 Sum_probs=185.5
Q ss_pred eeeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC---CcceeEEEeee------------ccceeEEE--Eec
Q psy10348 4 RYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA---FHACVRHFYGH------------GHAINELK--FHP 66 (291)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~---~~~~~~~~~~~------------~~~v~~~~--~~~ 66 (291)
.....|...|++++|+|++ .+|++|+.||.|++||++ +++.+..+..| ...+.++. +++
T Consensus 105 ~~~~~h~~~v~~~~~~~~~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 105 SLTYDCSSTVTQITMIPNF----DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp SEEEECSSCEEEEEECTTS----SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred eeeccCCCCEEEEEEeCCC----CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 3445689999999999988 499999999999999994 56655555433 33455555 446
Q ss_pred CCCcEEEEeecCCeEEEEECCCcceeeeeccccC--CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcccc
Q psy10348 67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG--HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESY 144 (291)
Q Consensus 67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 144 (291)
++.+|++|+.||.|++||+++++.+..+ .. |...|.+++|+|++++|++|+.||.|++||+++++.+..+.
T Consensus 181 -~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--- 253 (437)
T 3gre_A 181 -EKSLLVALTNLSRVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS--- 253 (437)
T ss_dssp -SCEEEEEEETTSEEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB---
T ss_pred -CCCEEEEEeCCCeEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe---
Confidence 7899999999999999999999998888 45 88999999999999999999999999999999877655432
Q ss_pred ccCCCCccccccCccccCcccccccccCcceeEEEEc------CCEEEEecCCCeEEEecCCCCCccccccCCC-cee--
Q psy10348 145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL------GDFVLSKSCENCIICWKPGRLEDKELRTNET-NVT-- 215 (291)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~-- 215 (291)
..|...|.+++|+ +.+|++++.|+.|++||+++++......... ...
T Consensus 254 ------------------------~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 309 (437)
T 3gre_A 254 ------------------------FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSME 309 (437)
T ss_dssp ------------------------CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGG
T ss_pred ------------------------cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccc
Confidence 1377789999776 3489999999999999998775431111000 000
Q ss_pred -------e--eeeecC--CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEE-----------------
Q psy10348 216 -------I--INRLNF--KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQI----------------- 267 (291)
Q Consensus 216 -------~--~~~~~~--~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----------------- 267 (291)
. -..+.+ |...+..+++. + +++|++|+.||.|++||+.+++........
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (437)
T 3gre_A 310 HFLPIEKGLEELNFCGIRSLNALSTISVS-N--DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLT 386 (437)
T ss_dssp GGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T--TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEE
T ss_pred eecccccccccceecccccCCceEEEEEC-C--ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceE
Confidence 0 001222 56667777776 3 799999999999999999988644221100
Q ss_pred --------------EeccccccceeeeEEccC--CceeeC
Q psy10348 268 --------------LSHPRCMSAVRQTTLSKN--GNVLLC 291 (291)
Q Consensus 268 --------------~~~~~~~~~v~~~~~s~~--g~~l~s 291 (291)
.....|...|++++|+++ +.+|++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s 426 (437)
T 3gre_A 387 MLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVA 426 (437)
T ss_dssp EEEEECC-------------CCCEEEEEEEESSSSEEEEE
T ss_pred EEEEecccccccccCcccccccceeeEeeeccCCceEEEE
Confidence 001138889999999998 777764
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-33 Score=246.40 Aligned_cols=226 Identities=19% Similarity=0.260 Sum_probs=193.6
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|..+|.+++|+|++ ++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++++.||.|++||+.
T Consensus 53 ~~~~~v~~~~~s~~~----~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 53 VTETPVRAGKFIARK----NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp CCSSCEEEEEEEGGG----TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGG
T ss_pred cCCCcEEEEEEeCCC----CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECC
Confidence 478999999999999 4999999999999999999999999999999999999999 88999999999999999998
Q ss_pred Cc-ceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 88 TD-ICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 88 ~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
++ .....+ .+|...|.+++|+| ++..|++++.||.|++||+.++.....+.
T Consensus 128 ~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~------------------------ 180 (814)
T 3mkq_A 128 NNWALEQTF---EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT------------------------ 180 (814)
T ss_dssp GTSEEEEEE---ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE------------------------
T ss_pred CCceEEEEE---cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe------------------------
Confidence 87 555555 68999999999999 88899999999999999998776543332
Q ss_pred ccccccCcceeEEEEc----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 166 STRDIHRNYVDCVRWL----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
..+...+.+++|+ +.++++++.|+.|++||+.+.. .+..+..|...+..++++ |++.+|
T Consensus 181 ---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~------------~~~~~~~~~~~v~~~~~~--~~~~~l 243 (814)
T 3mkq_A 181 ---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS------------CVATLEGHMSNVSFAVFH--PTLPII 243 (814)
T ss_dssp ---CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE------------EEEEEECCSSCEEEEEEC--SSSSEE
T ss_pred ---cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc------------EEEEEcCCCCCEEEEEEc--CCCCEE
Confidence 1245778899995 5699999999999999998773 377778888888776655 669999
Q ss_pred EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348 242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV 288 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 288 (291)
++++.||.|++||+.+++. ... ...+...+.+++|+|+|+.
T Consensus 244 ~~~~~dg~v~vwd~~~~~~----~~~--~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 244 ISGSEDGTLKIWNSSTYKV----EKT--LNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp EEEETTSCEEEEETTTCSE----EEE--ECCSSSSEEEEEECTTCGG
T ss_pred EEEeCCCeEEEEECCCCcE----EEE--eecCCCcEEEEEEccCCCc
Confidence 9999999999999998742 223 3356789999999999873
No 87
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-33 Score=228.99 Aligned_cols=251 Identities=17% Similarity=0.331 Sum_probs=188.0
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|.+.|.+++|+++ ++++|+.||.|++||+++++.+..+.+|...|.+++|++ ..+++|+.||.|++||+.
T Consensus 157 ~h~~~v~~~~~~~~------~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 157 GHTGGVWSSQMRDN------IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp CCSSCEEEEEEETT------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESS
T ss_pred CCCCCEEEEEecCC------EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECC
Confidence 47888888888888 688888888888888888888888888888888888865 568888888888888888
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc------ccccCC--------CCccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE------SYTFNP--------ARSTR 153 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------~~~~~~--------~~~~~ 153 (291)
+++.+..+ .+|...|.++.| ++.++++++.||.|++||+++++.+..+.. .+.+.. ++...
T Consensus 228 ~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 228 TGQCLHVL---MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 302 (445)
T ss_dssp SCCEEEEE---ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEE
T ss_pred CCcEEEEE---cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEE
Confidence 88888888 678888888888 677888888888888888887777666553 122211 11111
Q ss_pred cccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC---CcccEEEE
Q psy10348 154 PFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF---KDCEIWFI 230 (291)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~ 230 (291)
.++... ........+|...+.++.++++++++++.||.|++||+++++. +..+.. +...+..+
T Consensus 303 i~d~~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~------------~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 303 VWDVET--GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC------------LQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp EEETTT--CCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCE------------EEEECSTTSCSSCEEEE
T ss_pred EEECCC--CCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcE------------EEEEccCCCCCCCEEEE
Confidence 111111 1223344578889999999999999999999999999988754 555554 66667665
Q ss_pred EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.+ + +++|++|+.||.|++||+.+++.+... ......+|.+.|.+++|+|+|.+|++
T Consensus 369 ~~--~--~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 369 QF--N--KNFVITSSDDGTVKLWDLKTGEFIRNL-VTLESGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp EE--C--SSEEEEEETTSEEEEEETTTCCEEEEE-EECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred EE--C--CCEEEEEeCCCeEEEEECCCCceeeee-eccccCCCCceEEEEEecCCEEEEEE
Confidence 54 4 789999999999999999998643211 11122367889999999999998874
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.4e-33 Score=226.37 Aligned_cols=220 Identities=20% Similarity=0.376 Sum_probs=187.0
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
|...|+|++| ++ +++++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|++|+.||.|++||+.+
T Consensus 132 ~~~~v~~~~~--d~----~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 132 TSKGVYCLQY--DD----QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SCCCEEEEEC--CS----SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSS
T ss_pred CCCcEEEEEE--CC----CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCC
Confidence 4567888887 45 59999999999999999999999999999999999998 457999999999999999999
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
++.+..+ .+|...|.+++|+ +..+++|+.||.|++||++++..... ....
T Consensus 203 ~~~~~~~---~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~-------------------------~~~~ 252 (435)
T 1p22_A 203 GEMLNTL---IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL-------------------------RRVL 252 (435)
T ss_dssp CCEEEEE---CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEE-------------------------EEEE
T ss_pred CcEEEEE---cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCcee-------------------------eeEe
Confidence 9998888 7899999999997 45999999999999999988764311 1122
Q ss_pred cccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348 169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248 (291)
Q Consensus 169 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 248 (291)
.+|...|.+++|+++++++++.|+.|++||+++.+. +..+..|...+.++.+ + +.++++|+.||
T Consensus 253 ~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~------------~~~~~~~~~~v~~~~~--~--~~~l~~g~~dg 316 (435)
T 1p22_A 253 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF------------VRTLNGHKRGIACLQY--R--DRLVVSGSSDN 316 (435)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE------------EEEEECCSSCEEEEEE--E--TTEEEEEETTS
T ss_pred cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE------------EEEEcCCCCcEEEEEe--C--CCEEEEEeCCC
Confidence 458899999999999999999999999999988744 7778888888877665 3 88999999999
Q ss_pred cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.|++||+.+++. .....+|...|.+++| ++++|++
T Consensus 317 ~i~iwd~~~~~~------~~~~~~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 317 TIRLWDIECGAC------LRVLEGHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp CEEEEETTTCCE------EEEECCCSSCEEEEEC--CSSEEEE
T ss_pred eEEEEECCCCCE------EEEEeCCcCcEEEEEe--cCCEEEE
Confidence 999999998752 2233478889999999 6777763
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3e-33 Score=230.22 Aligned_cols=226 Identities=17% Similarity=0.291 Sum_probs=189.3
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEec-CCCcEEEEeecCCeEEEEEC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~ 86 (291)
.|.+.|.+++|+|++ ++++|+.||+|++||+++++.+..+.+|...|.+++|++ .++.++++|+.||.|++||+
T Consensus 160 ~h~~~V~~l~~~~~~-----~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~ 234 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-----ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 234 (464)
T ss_dssp CCSSCEEEEEECSTT-----EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEEC
T ss_pred CCCcCEEEEEEcCCC-----EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeC
Confidence 488999999999876 999999999999999999999999999999999999984 26789999999999999999
Q ss_pred CCcceeee--------------------eccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcccccc
Q psy10348 87 KTDICIAI--------------------FGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 87 ~~~~~~~~--------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
.++..... ...+.+|...|.++ +++++++++++.||.|++||+++++.+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~------ 306 (464)
T 3v7d_B 235 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL------ 306 (464)
T ss_dssp CCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE------
T ss_pred CCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe------
Confidence 87653211 11226888888887 567899999999999999999988765443
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD 224 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
.+|...|.+++|+ ++++++++.|+.|++||+++++ .+..+..|.
T Consensus 307 ----------------------~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------------~~~~~~~h~ 352 (464)
T 3v7d_B 307 ----------------------SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE------------LMYTLQGHT 352 (464)
T ss_dssp ----------------------CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE------------EEEEECCCS
T ss_pred ----------------------cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc------------EEEEEeCCC
Confidence 3488999999998 6799999999999999998874 478888898
Q ss_pred ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
..+..+.+ + +.+|++|+.||.|++||+.+... .... .+...+..++|+|++++|++
T Consensus 353 ~~v~~~~~--~--~~~l~s~s~dg~v~vwd~~~~~~----~~~~---~~~~~~~~~~~~~~~~~l~~ 408 (464)
T 3v7d_B 353 ALVGLLRL--S--DKFLVSAAADGSIRGWDANDYSR----KFSY---HHTNLSAITTFYVSDNILVS 408 (464)
T ss_dssp SCEEEEEE--C--SSEEEEEETTSEEEEEETTTCCE----EEEE---ECTTCCCEEEEEECSSEEEE
T ss_pred CcEEEEEE--c--CCEEEEEeCCCcEEEEECCCCce----eeee---cCCCCccEEEEEeCCCEEEE
Confidence 88877665 4 78999999999999999998642 1222 24567888999999999874
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=246.03 Aligned_cols=212 Identities=11% Similarity=0.102 Sum_probs=170.1
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
....|.+.|++++|+|++ .+||+|+.||.|+||+..+.+....+ .|..+|.+++|+| + ++|++++.|++|++|
T Consensus 12 ~~~gh~~~V~~lafspdg----~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQ----NLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp EEEECSSCEEEEEEETTT----TEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred cccCCCCCcEEEEECCCC----CEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 345688999999999999 59999999999999999877765554 4788999999999 4 599999999999999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
|+.+++.+..+ .|...|++++|+|++++|++|+.||.|++||+++++.. .+.. + . ...
T Consensus 85 d~~~~~~~~~~----~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i-----~--------~----~~~ 142 (902)
T 2oaj_A 85 SLYSQKVLTTV----FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKL-----D--------N----LQK 142 (902)
T ss_dssp ETTTCSEEEEE----ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEE-----C--------C----HHH
T ss_pred ECCCCcEEEEE----cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-ccee-----c--------c----ccc
Confidence 99999988887 36789999999999999999999999999999887642 1000 0 0 000
Q ss_pred c-ccccccCcceeEEEEcC---CEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC-----------------
Q psy10348 165 F-STRDIHRNYVDCVRWLG---DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK----------------- 223 (291)
Q Consensus 165 ~-~~~~~~~~~v~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 223 (291)
. ....+|..+|.+++|++ ..+++|+.|+.| +||+++.+. +..+..+
T Consensus 143 ~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 143 SSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI------------KQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp HHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE------------EEEECCCBCTTCCCSTTCCCTTSC
T ss_pred cccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce------------EEEEecccCCcCCCcccccccccc
Confidence 0 12245889999999984 589999999999 999988744 3334333
Q ss_pred -cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348 224 -DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 224 -~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
...|..++ ++|+|++|++|+.||.|++||+.++++
T Consensus 210 h~~~V~~v~--fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 210 RTPKVIQSL--YHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp BCCCEEEEE--ECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred cCCCeEEEE--EcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 34566554 557799999999999999999998753
No 91
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.7e-34 Score=232.53 Aligned_cols=234 Identities=12% Similarity=0.069 Sum_probs=173.7
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--eccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--HGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.|.+.|++++|+|... .+|++|+.||+|++||++++........ +...+.+++|+| ++.+|++|+.||.|++||
T Consensus 162 gH~~~V~~l~f~p~~~---~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 162 GAGGSITGLKFNPLNT---NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp SSSCCCCEEEECSSCT---TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEE
T ss_pred CCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeec
Confidence 4889999999998432 5999999999999999986554333332 334678999999 899999999999999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
++ ++.+..+ .+|...|.+++|+|++. +|++++.|+.|++||+++.+....+.
T Consensus 238 ~~-~~~~~~~---~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~----------------------- 290 (435)
T 4e54_B 238 MD-GKELWNL---RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL----------------------- 290 (435)
T ss_dssp SS-SCBCCCS---BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS-----------------------
T ss_pred cC-cceeEEE---ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE-----------------------
Confidence 87 4555555 78999999999999986 78899999999999998876433221
Q ss_pred cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc----ccEEEEEEEecCCC
Q psy10348 165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD----CEIWFIRFSMDYWQ 238 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~ 238 (291)
...+|...|++++|+ +++|++++.|+.|++||++++... ..+..+. ..+..+...++|++
T Consensus 291 --~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (435)
T 4e54_B 291 --YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP------------LGLIPHPHRHFQHLTPIKAAWHPRY 356 (435)
T ss_dssp --BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE------------EEECCCCCCCCSSSCCCBCEECSSS
T ss_pred --EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc------------eEEecccccccccceeEEEEEcCCC
Confidence 123488999999998 789999999999999999887653 1111111 11112223334444
Q ss_pred cEEEEEc------------CCCcEEEEEcCCCCCCcceeEEEeccccccceeee-EEccCCceeeC
Q psy10348 239 KILAVGN------------QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQT-TLSKNGNVLLC 291 (291)
Q Consensus 239 ~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~s 291 (291)
.+++++. .++.|++||..+++. ...+ ..+|...|.++ +|+|+|++|++
T Consensus 357 ~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~----~~~l-~~~~~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 357 NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM----MCQL-YDPESSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE----EEEE-CCSSCCCCCCEEEECTTSSCEEE
T ss_pred CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE----EEEE-eCCCCCcEEEEEEECCCCCEEEE
Confidence 4444443 346799999998853 2222 23677888887 69999999874
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.2e-33 Score=223.70 Aligned_cols=203 Identities=13% Similarity=0.070 Sum_probs=163.3
Q ss_pred cceeEEEEeeeccCCCCCEEE--EecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 10 EENFYTCAWSMDLESGRPLLA--VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~--~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
+..+.+++||||+. +++ +++.|++|+|||+++++++..+. |...|.+++|+| ++++|++++.+ .+.+|+..
T Consensus 133 ~~~~~~v~fSpDg~----~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 133 DDYTKLVYISREGT----VAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp TCCEEEEEECTTSS----CEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETT
T ss_pred ccCEEEEEEcCCCC----EEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEec
Confidence 45588999999994 765 45578999999999999988886 778899999999 99999999855 56677777
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC----cEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH----SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
+++.+... ....|...|.+++|+|+++++++++.|+ .+++|++........
T Consensus 206 ~~~~~~~~-~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~------------------------ 260 (365)
T 4h5i_A 206 TGSCIARK-TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL------------------------ 260 (365)
T ss_dssp TCCEEEEE-CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE------------------------
T ss_pred cCcceeee-ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce------------------------
Confidence 67665432 1257889999999999999999999887 588888876542211
Q ss_pred ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecCCCcE
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 240 (291)
......+|...|++++|+ +++|++|+.|++|++||+++++. +..+ .+|...|+.++|+ |||++
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~------------~~~~~~gH~~~V~~v~fS--pdg~~ 326 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM------------SKIFKQAHSFAITEVTIS--PDSTY 326 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE------------EEEETTSSSSCEEEEEEC--TTSCE
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE------------EEEecCcccCCEEEEEEC--CCCCE
Confidence 011223588899999998 78999999999999999998743 6664 7899998877665 66999
Q ss_pred EEEEcCCCcEEEEEcCCC
Q psy10348 241 LAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 241 l~~~~~dg~i~vwd~~~~ 258 (291)
||+|+.|++|+|||+...
T Consensus 327 laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 327 VASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTSEEEEEECCTT
T ss_pred EEEEeCCCeEEEEEcCCC
Confidence 999999999999999754
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.5e-34 Score=221.91 Aligned_cols=212 Identities=17% Similarity=0.226 Sum_probs=164.5
Q ss_pred eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC-CcEEEEeecCCeEE
Q psy10348 8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD-FNLLLSVSKDHTLR 82 (291)
Q Consensus 8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~ 82 (291)
.|.+.|++++|+++ + .+|++|+.|++|++||+++++ .+..+.+|...|.+++|+|+. +.+|++|+.|+.|+
T Consensus 55 gH~~~V~~v~~~~~~~~----~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYG----NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp CCSSCEEEEEECCGGGS----SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred CCCccEEEEEeCCCCCC----CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 47899999999864 4 599999999999999998874 566778899999999999932 78999999999999
Q ss_pred EEECCCcceeeeeccccCCCCceEEEEEccC-----------------CCEEEEEecCCcEEEEeccCchhhhhhccccc
Q psy10348 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLL-----------------GTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145 (291)
Q Consensus 83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 145 (291)
+||++.+........+.+|...|.+++|+|+ +++|++|+.|+.|++||++......
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~------- 203 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK------- 203 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE-------
T ss_pred EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc-------
Confidence 9999876433222233789999999999997 4689999999999999996542100
Q ss_pred cCCCCccccccCccccCcccccccccCcceeEEEEc--C----CEEEEecCCCeEEEecCCCCCccccccCCCceeeeee
Q psy10348 146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G----DFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR 219 (291)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (291)
....+.+|...|.+++|+ + ++|++++.|++|++||+....... .....
T Consensus 204 ------------------~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~--------~~~~~ 257 (316)
T 3bg1_A 204 ------------------EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT--------WSPKL 257 (316)
T ss_dssp ------------------EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC--------CBCCE
T ss_pred ------------------eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc--------hhhhh
Confidence 011234599999999998 2 589999999999999987632100 00122
Q ss_pred ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348 220 LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 258 (291)
+..+...++.++| +|++++||+++.||.|++|+....
T Consensus 258 ~~~~~~~v~~v~~--sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 258 LHKFNDVVWHVSW--SITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEECSSCEEEEEE--CTTTCCEEEEESSSCEEEEEECTT
T ss_pred hhcCCCcEEEEEE--cCCCCEEEEEcCCCeEEEEEECCC
Confidence 3345666776555 577999999999999999998643
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2e-32 Score=232.59 Aligned_cols=261 Identities=11% Similarity=0.147 Sum_probs=202.6
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc---ceeEEEEecCC-CcEEEEeecCCeEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH---AINELKFHPQD-FNLLLSVSKDHTLRL 83 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~-~~~l~s~~~dg~i~v 83 (291)
.|...|.+++|+|++. .++++++.||.|++||+.+++.+..+.+|.. .|.+++|+| + +++|++++.||.|++
T Consensus 158 ~~~~~v~~~~~~~~~~---~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 158 GHSQRINACHLKQSRP---MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISC 233 (615)
T ss_dssp SCSSCEEEEEECSSSS---CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEE
T ss_pred cCCccEEEEEECCCCC---cEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEE
Confidence 4778999999999984 4899999999999999999999999999999 999999999 7 999999999999999
Q ss_pred EECCCcceeeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc-------------------
Q psy10348 84 WNIKTDICIAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES------------------- 143 (291)
Q Consensus 84 wd~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------------------- 143 (291)
||+.+++.+..+. ....|...|.+++|+ ++++|++++.|+.|++||+++++.+..+...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 312 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRI 312 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEE
T ss_pred EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeE
Confidence 9999998887762 111799999999999 9999999999999999999876654332211
Q ss_pred --------------------------------ccc---------------------------------CCC---------
Q psy10348 144 --------------------------------YTF---------------------------------NPA--------- 149 (291)
Q Consensus 144 --------------------------------~~~---------------------------------~~~--------- 149 (291)
+.+ .+.
T Consensus 313 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d 392 (615)
T 1pgu_A 313 ISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWD 392 (615)
T ss_dssp EEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETT
T ss_pred EEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCC
Confidence 000 000
Q ss_pred CccccccCc----------------------------------------------------------------cccCc--
Q psy10348 150 RSTRPFDTQ----------------------------------------------------------------KEHFP-- 163 (291)
Q Consensus 150 ~~~~~~~~~----------------------------------------------------------------~~~~~-- 163 (291)
+....+... .....
T Consensus 393 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~ 472 (615)
T 1pgu_A 393 DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVF 472 (615)
T ss_dssp TEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEE
T ss_pred CCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEE
Confidence 000000000 00000
Q ss_pred -----cc--ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEE
Q psy10348 164 -----QF--STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFS 233 (291)
Q Consensus 164 -----~~--~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 233 (291)
.. .....|...|.+++|+ +++|++++.|+.|++||+.+.+. +..+.. |...+..++++
T Consensus 473 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~h~~~v~~~~~s 540 (615)
T 1pgu_A 473 KLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV------------KTSRWAFRTSKINAISWK 540 (615)
T ss_dssp ETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------EECCSCCCSSCEEEEEEC
T ss_pred ECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc------------eeEeecCCCCceeEEEEc
Confidence 00 3345688899999997 78999999999999999988743 666666 88888877666
Q ss_pred ecC--------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 234 MDY--------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 234 ~~~--------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+.. ++++|++|+.||.|++||+.++.. ......+|...|++++|+|+++ |++
T Consensus 541 p~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~h~~~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 541 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-----IIKALNAHKDGVNNLLWETPST-LVS 600 (615)
T ss_dssp CCC------CCSCCEEEEEETTSCEEEEESSCTTC-----CEEETTSSTTCEEEEEEEETTE-EEE
T ss_pred CccccccccccCCCEEEEEcCCCcEEEEECCCCce-----echhhhcCccceEEEEEcCCCC-eEE
Confidence 400 699999999999999999998732 2233457889999999999999 764
No 95
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.1e-33 Score=224.17 Aligned_cols=211 Identities=11% Similarity=0.131 Sum_probs=175.2
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL 106 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~ 106 (291)
.+++++.||.|++||+.+++....+.. |...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+ .+|...|.
T Consensus 105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~ 180 (401)
T 4aez_A 105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTM---AGHQARVG 180 (401)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEE
T ss_pred CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEe---cCCCCceE
Confidence 577788999999999999998887775 789999999999 9999999999999999999999988888 79999999
Q ss_pred EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCE
Q psy10348 107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDF 184 (291)
Q Consensus 107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 184 (291)
+++| ++.+|++++.||.|++||++..... .....+|...|.+++|+ +++
T Consensus 181 ~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~~~~ 231 (401)
T 4aez_A 181 CLSW--NRHVLSSGSRSGAIHHHDVRIANHQ---------------------------IGTLQGHSSEVCGLAWRSDGLQ 231 (401)
T ss_dssp EEEE--ETTEEEEEETTSEEEEEETTSSSCE---------------------------EEEEECCSSCEEEEEECTTSSE
T ss_pred EEEE--CCCEEEEEcCCCCEEEEecccCcce---------------------------eeEEcCCCCCeeEEEEcCCCCE
Confidence 9999 4679999999999999999853321 11223589999999998 779
Q ss_pred EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc--CCCcEEEEEcCCCCCCc
Q psy10348 185 VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN--QSGRTYVWDLDVQDPSS 262 (291)
Q Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~ 262 (291)
|++++.|+.|++||+++... +..+..+...+..++++++ ...++++|+ .||.|++||+.+++.
T Consensus 232 l~s~~~d~~v~iwd~~~~~~------------~~~~~~~~~~v~~~~~~p~-~~~ll~~~~gs~d~~i~i~d~~~~~~-- 296 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIP------------KFTKTNHNAAVKAVAWCPW-QSNLLATGGGTMDKQIHFWNAATGAR-- 296 (401)
T ss_dssp EEEEETTSCEEEEETTCSSE------------EEEECCCSSCCCEEEECTT-STTEEEEECCTTTCEEEEEETTTCCE--
T ss_pred EEEEeCCCeEEEccCCCCCc------------cEEecCCcceEEEEEECCC-CCCEEEEecCCCCCEEEEEECCCCCE--
Confidence 99999999999999988643 6677778888877766643 235666655 799999999998753
Q ss_pred ceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 263 IKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 263 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
...+. +...|.+++|+|++++|++
T Consensus 297 --~~~~~---~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 297 --VNTVD---AGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp --EEEEE---CSSCEEEEEECSSSSEEEE
T ss_pred --EEEEe---CCCcEEEEEECCCCCeEEE
Confidence 23332 4568999999999999874
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=212.71 Aligned_cols=223 Identities=15% Similarity=0.207 Sum_probs=183.0
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 82 (291)
...|...|.+++|+|++ .+|++++.||.|++|++... +.+..+.+|...|.+++|.+ .++++++.||.|+
T Consensus 55 ~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~d~~i~ 127 (313)
T 3odt_A 55 VYTGQGFLNSVCYDSEK----ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQD---GVVISGSWDKTAK 127 (313)
T ss_dssp EEECSSCEEEEEEETTT----TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEET---TEEEEEETTSEEE
T ss_pred eecCCccEEEEEECCCC----CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecC---CEEEEEeCCCCEE
Confidence 34578999999999998 59999999999999998654 56778889999999999953 6999999999999
Q ss_pred EEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 83 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
+|| .++....+ ..|...+.+++|.| ++.++++++.||.|++||..... ..+.
T Consensus 128 ~~d--~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~-------------------- 180 (313)
T 3odt_A 128 VWK--EGSLVYNL---QAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVI--KTFS-------------------- 180 (313)
T ss_dssp EEE--TTEEEEEE---ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEE--EEEC--------------------
T ss_pred EEc--CCcEEEec---ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceE--EEEe--------------------
Confidence 999 56666666 68999999999998 89999999999999999943221 1111
Q ss_pred CcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348 162 FPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (291)
..|...+.+++|+ ...+++++.|+.|++||+++.+. +..+..|...+..++++ |++ .
T Consensus 181 -------~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~------------~~~~~~~~~~i~~~~~~--~~~-~ 238 (313)
T 3odt_A 181 -------GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV------------LRTYEGHESFVYCIKLL--PNG-D 238 (313)
T ss_dssp -------SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE------------EEEEECCSSCEEEEEEC--TTS-C
T ss_pred -------ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh------------hhhhhcCCceEEEEEEe--cCC-C
Confidence 1278889999998 44599999999999999988744 77788888888876665 557 5
Q ss_pred EEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 241 LAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
|++++.||.|++||+.+++. ...+ ..|..+|.+++|+|++++++
T Consensus 239 l~~~~~dg~v~iwd~~~~~~----~~~~--~~~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 239 IVSCGEDRTVRIWSKENGSL----KQVI--TLPAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp EEEEETTSEEEEECTTTCCE----EEEE--ECSSSCEEEEEECTTSCEEE
T ss_pred EEEEecCCEEEEEECCCCce----eEEE--eccCceEEEEEEccCCCEEE
Confidence 88999999999999998852 2333 35678999999999999665
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-33 Score=228.22 Aligned_cols=236 Identities=11% Similarity=0.038 Sum_probs=178.1
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc-----ceeEEEEecCCCcEEEEeecCC
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH-----AINELKFHPQDFNLLLSVSKDH 79 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~s~~~dg 79 (291)
+.+.|.+.|.+++|||++ .+||+++.||.|++||.+. ++..+. |.. .|.+++|+| ++++||+|+.||
T Consensus 80 ~~~~~~~~V~~vawSPdG----~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DG 151 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPID----DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDG 151 (588)
T ss_dssp STTSCSCCEEEEEECSSS----SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTS
T ss_pred eecCCCCcEEEEEECCCC----CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCC
Confidence 344568899999999999 5999999999999999654 666666 665 499999999 999999999999
Q ss_pred eEEEEECCCcce-------eeeec-cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh---hhhccccccCC
Q psy10348 80 TLRLWNIKTDIC-------IAIFG-GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK---DACAESYTFNP 148 (291)
Q Consensus 80 ~i~vwd~~~~~~-------~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~~ 148 (291)
+|++||+.++.. +..+. ...+|...|.+++|+|+| +++++.|++|++||+..+... .++.
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~------- 222 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ------- 222 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-------
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-------
Confidence 999999998753 34431 115688999999999999 888899999999999877632 1111
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW 228 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (291)
.+|...|.+++|+++.+++++ +++|++||+...+. .....+|...+.
T Consensus 223 --------------------~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~------------~~~~~gh~~~V~ 269 (588)
T 2j04_A 223 --------------------NASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSI------------SSLKTGSLENFH 269 (588)
T ss_dssp --------------------CCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEE------------EEEECSCCSCCC
T ss_pred --------------------ccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeE------------EEEEcCCCceEE
Confidence 247888999999988999887 79999999987643 222226888888
Q ss_pred EEEEEecCCCcEEEEEcCCCcEEEEEcCCC-----CCCc----cee-------EEEeccccccceeeeEEccCCceeeC
Q psy10348 229 FIRFSMDYWQKILAVGNQSGRTYVWDLDVQ-----DPSS----IKF-------QILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 229 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-----~~~~----~~~-------~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
.+.+--+|++..|++++.||+ ++|....- ..+. ... ..+....+...|.+++|||||+.||+
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEE
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEE
Confidence 776611577999999999999 99997421 0000 000 00111122456899999999999874
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=225.71 Aligned_cols=233 Identities=12% Similarity=0.048 Sum_probs=183.9
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeee------------------------------
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGH------------------------------ 55 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~------------------------------ 55 (291)
...++.+++|+|++ ++|+++ .++.|++||+.+++ .+..+..+
T Consensus 3 ~~~p~~~v~~s~dg----~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (450)
T 2vdu_B 3 VIHPLQNLLTSRDG----SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLK 77 (450)
T ss_dssp EECCCCEEEECSSS----SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------
T ss_pred ccccEEEEEecCCC----CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccc
Confidence 34688999999999 466655 57899999999998 66555432
Q ss_pred ------------------------ccceeEEEEecCCCcEE-EEeecCCeEEEEECC--CcceeeeeccccCCCCceEEE
Q psy10348 56 ------------------------GHAINELKFHPQDFNLL-LSVSKDHTLRLWNIK--TDICIAIFGGVEGHRDEVLSA 108 (291)
Q Consensus 56 ------------------------~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~i~~~ 108 (291)
.+.|.+++|+| ++.+| ++|+.||.|++||+. +++.+..+.. ..|...|.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~ 155 (450)
T 2vdu_B 78 SNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAI 155 (450)
T ss_dssp ----------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-EECSSCEEEE
T ss_pred cCcCccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeec-ccCCCCceEE
Confidence 23699999999 78885 899999999999999 8888777621 2567899999
Q ss_pred EEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCC-----
Q psy10348 109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD----- 183 (291)
Q Consensus 109 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 183 (291)
+|+|++++|++++.||.+++|++.+++.... ....+.+|...|.+++|+++
T Consensus 156 ~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~------------------------~~~~~~~h~~~v~~~~~sp~~~~~~ 211 (450)
T 2vdu_B 156 SIAEDDTTVIIADKFGDVYSIDINSIPEEKF------------------------TQEPILGHVSMLTDVHLIKDSDGHQ 211 (450)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCCCSSC------------------------CCCCSEECSSCEEEEEEEECTTSCE
T ss_pred EEcCCCCEEEEEeCCCcEEEEecCCcccccc------------------------cceeeecccCceEEEEEcCCCCCCc
Confidence 9999999999999999999999987764320 01122458899999999833
Q ss_pred EEEEecCCCeEEEecCCCCCccccccCCCceeeeee-ecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348 184 FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR-LNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS 262 (291)
Q Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 262 (291)
+|++++.|+.|++||+++... +.. +.+|...+..++|+ ++++|++|+.|+.|++||+.+++.+
T Consensus 212 ~l~s~~~d~~i~vwd~~~~~~------------~~~~~~~h~~~v~~~~~s---d~~~l~s~~~d~~v~vwd~~~~~~~- 275 (450)
T 2vdu_B 212 FIITSDRDEHIKISHYPQCFI------------VDKWLFGHKHFVSSICCG---KDYLLLSAGGDDKIFAWDWKTGKNL- 275 (450)
T ss_dssp EEEEEETTSCEEEEEESCTTC------------EEEECCCCSSCEEEEEEC---STTEEEEEESSSEEEEEETTTCCEE-
T ss_pred EEEEEcCCCcEEEEECCCCce------------eeeeecCCCCceEEEEEC---CCCEEEEEeCCCeEEEEECCCCcEe-
Confidence 999999999999999987754 444 55788888887776 5999999999999999999998643
Q ss_pred ceeEEEecc-----------------------ccccceeeeEEccCCceeeC
Q psy10348 263 IKFQILSHP-----------------------RCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 263 ~~~~~~~~~-----------------------~~~~~v~~~~~s~~g~~l~s 291 (291)
..+... .....|.+++|+|++++|++
T Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 324 (450)
T 2vdu_B 276 ---STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF 324 (450)
T ss_dssp ---EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred ---eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence 222210 23457899999999999874
No 99
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-31 Score=211.76 Aligned_cols=233 Identities=19% Similarity=0.236 Sum_probs=185.9
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
.|...|.+++|+|++ .+|++++.|+.|++|+............+...+..+.+++ ++.+|++++.|+.+++||+.
T Consensus 84 ~h~~~V~~~~~s~dg----~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 84 GHSHFVSDVVISSDG----QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp CCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTT
T ss_pred CCCCCEEEEEECCCC----CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeC
Confidence 478999999999998 5999999999999999999988888888889999999999 88999999999999999998
Q ss_pred CcceeeeeccccCCCCceEEEEEccCC--CEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLG--TKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
........ ..+|...+..++|++++ .++++++.|+.|++||+++++....+
T Consensus 159 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~------------------------- 211 (340)
T 4aow_A 159 GVCKYTVQ--DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH------------------------- 211 (340)
T ss_dssp SCEEEEEC--SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE-------------------------
T ss_pred CCceEEEE--eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe-------------------------
Confidence 65544332 26899999999998875 47889999999999999988765443
Q ss_pred ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
.+|...|.+++|+ +++|++++.|+.|++||+++.+. +..+..+. .+..+. ++|++.+ ++
T Consensus 212 ---~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~------------~~~~~~~~-~v~~~~--~~~~~~~-~~ 272 (340)
T 4aow_A 212 ---IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH------------LYTLDGGD-IINALC--FSPNRYW-LC 272 (340)
T ss_dssp ---CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE------------EEEEECSS-CEEEEE--ECSSSSE-EE
T ss_pred ---cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce------------eeeecCCc-eEEeee--cCCCCce-ee
Confidence 3488999999998 77999999999999999988743 55555443 455544 4565655 55
Q ss_pred EcCCCcEEEEEcCCCCCCcce---eEEEeccccccceeeeEEccCCceeeC
Q psy10348 244 GNQSGRTYVWDLDVQDPSSIK---FQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++.|+.|++||++++...... .......+|...|++++|+|||++|++
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 323 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA 323 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEE
T ss_pred ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE
Confidence 667999999999876432111 111223468889999999999999985
No 100
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.6e-34 Score=227.05 Aligned_cols=219 Identities=8% Similarity=0.078 Sum_probs=162.4
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
.|...|++++|+|++ ++|++++.||.|++||+.+++ ....+..|...|.+++|+| ++++|++++.|+.|++|
T Consensus 53 ~h~~~v~~~~~s~~~----~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw 127 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKS----NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVC 127 (377)
T ss_dssp CCSSCEEEEEECTTT----CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEEC
T ss_pred cCCceEEEEEEeCCC----CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEE
Confidence 478999999999998 499999999999999999877 5667778999999999999 89999999999999999
Q ss_pred ECCCcce---eeeeccccC-CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348 85 NIKTDIC---IAIFGGVEG-HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE 160 (291)
Q Consensus 85 d~~~~~~---~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
|+++++. ...+ .. |...|.+++|+|++++|++++.|+.|++||++.......... .++.....
T Consensus 128 d~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------~~~~~~~~ 194 (377)
T 3dwl_C 128 YFEQENDWWVSKHL---KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEA----------SVWGSRLP 194 (377)
T ss_dssp CC-----CCCCEEE---CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCS----------CSSCSCCC
T ss_pred EECCcccceeeeEe---ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccc----------cccccccc
Confidence 9998774 4555 55 999999999999999999999999999999976543221110 00000000
Q ss_pred cCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348 161 HFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ 238 (291)
Q Consensus 161 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (291)
........ .|...|.+++|+ +++|++++.|+.|++||+++.+.. ...+..+..|...+..++|+++ +
T Consensus 195 ~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~--~ 263 (377)
T 3dwl_C 195 FNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP--------PRALITVKLSQLPLRSLLWANE--S 263 (377)
T ss_dssp EEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC--------EEECCCEECSSSCEEEEEEEET--T
T ss_pred hhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc--------ceeeEeecCCCCceEEEEEcCC--C
Confidence 01112222 689999999998 779999999999999999887541 1225667788888888777754 9
Q ss_pred cEEEEEcCCCcEEEEEcC
Q psy10348 239 KILAVGNQSGRTYVWDLD 256 (291)
Q Consensus 239 ~~l~~~~~dg~i~vwd~~ 256 (291)
++|++|+.++.+ +|+..
T Consensus 264 ~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 264 AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEEEESSSSEE-EECCC
T ss_pred CEEEEEcCCcEE-EEEeC
Confidence 999999877665 66665
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.7e-32 Score=220.06 Aligned_cols=248 Identities=20% Similarity=0.320 Sum_probs=199.6
Q ss_pred eeeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
+.-..+..+.++.++. + +|++|+.||.|++||+.+++.+..+.+|.+.|.+++|++ .++++|+.||.|++|
T Consensus 114 l~~h~~~v~~~~~~~g--~----~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 114 LKGHDDHVITCLQFCG--N----RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVW 184 (445)
T ss_dssp EECSTTSCEEEEEEET--T----EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEE
T ss_pred ecccCCCcEEEEEEcC--C----EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEE
Confidence 4456777888999994 3 899999999999999999999999999999999999999 499999999999999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccc------cccCCC--------C
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES------YTFNPA--------R 150 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~~~~--------~ 150 (291)
|+.+++.+..+ .+|...|.++.|+ ++.+++|+.||.|++||+++++....+..+ +.+... +
T Consensus 185 d~~~~~~~~~~---~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 259 (445)
T 2ovr_B 185 NAETGECIHTL---YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF 259 (445)
T ss_dssp ETTTTEEEEEE---CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTS
T ss_pred ECCcCcEEEEE---CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCC
Confidence 99999999999 7999999999996 678999999999999999998887766532 222111 1
Q ss_pred ccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEE
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFI 230 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (291)
....++.. .........+|...|.++.|++.++++++.|+.|++||+++++. +..+..+...+..+
T Consensus 260 ~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 260 MVKVWDPE--TETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC------------IHTLTGHQSLTSGM 325 (445)
T ss_dssp CEEEEEGG--GTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCE------------EEEECCCCSCEEEE
T ss_pred EEEEEECC--CCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCE------------EEEEcCCcccEEEE
Confidence 11111111 11233445679999999999999999999999999999988744 67777887776655
Q ss_pred EEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEccCCceee
Q psy10348 231 RFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 231 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.+ + +.++++|+.||.|++||+.+++. ...+. ...|...|.+++|+ +++|+
T Consensus 326 ~~--~--~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~--~~~l~ 376 (445)
T 2ovr_B 326 EL--K--DNILVSGNADSTVKIWDIKTGQC----LQTLQGPNKHQSAVTCLQFN--KNFVI 376 (445)
T ss_dssp EE--E--TTEEEEEETTSCEEEEETTTCCE----EEEECSTTSCSSCEEEEEEC--SSEEE
T ss_pred EE--e--CCEEEEEeCCCeEEEEECCCCcE----EEEEccCCCCCCCEEEEEEC--CCEEE
Confidence 43 4 78999999999999999998753 23333 23488899999996 45655
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.1e-32 Score=216.27 Aligned_cols=232 Identities=11% Similarity=0.078 Sum_probs=183.5
Q ss_pred eeeeecceeEEEEeeeccCCCCC-EEEEecCCCeEEEEcc-CCcceeEEEee--eccceeEEEEecCCCcEEEEeecCCe
Q psy10348 5 YSLLIEENFYTCAWSMDLESGRP-LLAVAGSRAVIRIFSP-AFHACVRHFYG--HGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~~~~-~l~~~~~dg~i~vw~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
....|...|.+++|+|++ . +|++|+.||.|++||+ ++++. ..+.+ |...|.+++|+| +.+|++++.|+.
T Consensus 51 ~~~~~~~~v~~~~~~~~~----~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~ 123 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDNT----DLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGL 123 (342)
T ss_dssp EEEECSSCEEEEEEEESS----SEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred eeeecCCceEEEEECCCC----CcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence 345788999999999997 7 8999999999999999 77654 67778 999999999998 689999999999
Q ss_pred EEEEECCC---------cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCC
Q psy10348 81 LRLWNIKT---------DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPAR 150 (291)
Q Consensus 81 i~vwd~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~ 150 (291)
|++||+++ ++.+..+ .|...|.+++|+|++ +++++.|+.|++||+++ +......
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~---------- 187 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNT----KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTI---------- 187 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSS----SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEE----------
T ss_pred EEEEcccccccccccccCCeeeEE----eeCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccccee----------
Confidence 99999987 6666665 488999999999887 99999999999999987 5421110
Q ss_pred ccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc--
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC-- 225 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 225 (291)
....|...+.+++|+ ++++++++.||.|++|+++...... .......+..+..
T Consensus 188 ----------------~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~------~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 188 ----------------EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY------NSSKRFAFRCHRLNL 245 (342)
T ss_dssp ----------------EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST------TCTTCEEEECCCCCT
T ss_pred ----------------eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc------ccccceeeecccccc
Confidence 112377789999997 4699999999999999997751000 0011444555543
Q ss_pred -------cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc-ccceeeeEEccCCceeeC
Q psy10348 226 -------EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC-MSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 226 -------~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~s 291 (291)
.+..++ ++|++++|++|+.||.|++||+.+++. .....+| ..+|.+++ |+|++|++
T Consensus 246 ~~~~~~~~i~~~~--~s~~~~~l~~~~~dg~i~vwd~~~~~~------~~~~~~~h~~~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 246 KDTNLAYPVNSIE--FSPRHKFLYTAGSDGIISCWNLQTRKK------IKNFAKFNEDSVVKIA--CSDNILCL 309 (342)
T ss_dssp TCCSSCCCEEEEE--ECTTTCCEEEEETTSCEEEEETTTTEE------EEECCCCSSSEEEEEE--ECSSEEEE
T ss_pred cccccceeEEEEE--EcCCCCEEEEecCCceEEEEcCccHhH------hhhhhcccCCCceEec--CCCCeEEE
Confidence 666554 557799999999999999999998742 2234466 88999999 99999874
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-33 Score=220.36 Aligned_cols=213 Identities=7% Similarity=-0.047 Sum_probs=165.7
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC---------Ccceeeeecc
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK---------TDICIAIFGG 97 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~---------~~~~~~~~~~ 97 (291)
.++++|+.||.|++||+++++.+..+. ...|.++.|+| + +++++.|++|++|+.. +++.+..+.
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~- 121 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE- 121 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE-
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEee-
Confidence 599999999999999999999888886 57789999999 5 9999999999999765 444344432
Q ss_pred ccCCCCceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcce
Q psy10348 98 VEGHRDEVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV 175 (291)
Q Consensus 98 ~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 175 (291)
.+|..+|.+++|+| ++++|++++.||.|++||+++++...... ..|...+
T Consensus 122 -~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~---------------------------~~~~~~i 173 (343)
T 3lrv_A 122 -VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS---------------------------AKSDVEY 173 (343)
T ss_dssp -CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC---------------------------CCSSCCC
T ss_pred -cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---------------------------cCCCCce
Confidence 36778999999999 99999999999999999999887543221 1255679
Q ss_pred eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEE
Q psy10348 176 DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYV 252 (291)
Q Consensus 176 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~v 252 (291)
.+++|+ +.+|++|+.|+.|++||+++++.. ...+.. |...|..++|+ |++.+|++++ |+.|++
T Consensus 174 ~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~-----------~~~~~~~h~~~v~~l~fs--~~g~~l~s~~-~~~v~i 239 (343)
T 3lrv_A 174 SSGVLHKDSLLLALYSPDGILDVYNLSSPDQA-----------SSRFPVDEEAKIKEVKFA--DNGYWMVVEC-DQTVVC 239 (343)
T ss_dssp CEEEECTTSCEEEEECTTSCEEEEESSCTTSC-----------CEECCCCTTSCEEEEEEC--TTSSEEEEEE-SSBEEE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCCCC-----------ccEEeccCCCCEEEEEEe--CCCCEEEEEe-CCeEEE
Confidence 999998 779999999999999999987541 256666 78888776665 6699999999 559999
Q ss_pred EEcCCCCCCcceeEEEecccccccee--eeEEccCCceeeC
Q psy10348 253 WDLDVQDPSSIKFQILSHPRCMSAVR--QTTLSKNGNVLLC 291 (291)
Q Consensus 253 wd~~~~~~~~~~~~~~~~~~~~~~v~--~~~~s~~g~~l~s 291 (291)
||+++.+....... ...|...+. +++|+|+|++|++
T Consensus 240 wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 240 FDLRKDVGTLAYPT---YTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp EETTSSTTCBSSCC---CBC-----CCEEEEECTTSSEEEE
T ss_pred EEcCCCCcceeecc---cccccccccceEEEECCCCCEEEE
Confidence 99999865432211 112333444 6999999999974
No 104
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-33 Score=243.75 Aligned_cols=127 Identities=13% Similarity=0.159 Sum_probs=107.5
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-----------EEEeeeccceeEEEEecCCCcEEEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-----------RHFYGHGHAINELKFHPQDFNLLLS 74 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~~l~s 74 (291)
.+.|.+.|++++|+|++ .+|++|+.||.|++||+++++.. ..+.+|.++|.+++|+|.++..|++
T Consensus 94 ~~~~~~~V~~v~~sp~g----~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 94 TVFVPGKITSIDTDASL----DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEECSSCEEEEECCTTC----SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEcCCCCEEEEEECCCC----CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 34577899999999998 49999999999999999987753 2235688999999999955689999
Q ss_pred eecCCeEEEEECCCcceeeeeccc---------------cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348 75 VSKDHTLRLWNIKTDICIAIFGGV---------------EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137 (291)
Q Consensus 75 ~~~dg~i~vwd~~~~~~~~~~~~~---------------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 137 (291)
|+.||.| +||+++++.+..+... ..|...|.+++|+|+|++|++++.||.|++||+++++.+
T Consensus 170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 9999999 9999999888776211 123578999999999999999999999999999887654
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1e-32 Score=211.16 Aligned_cols=210 Identities=12% Similarity=0.039 Sum_probs=152.1
Q ss_pred cceeEEEEeeeccCCCCCEEEEec--------------------CCCeEEEEcc-CCcceeEEEeeeccceeEEEEec--
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAG--------------------SRAVIRIFSP-AFHACVRHFYGHGHAINELKFHP-- 66 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~--------------------~dg~i~vw~~-~~~~~~~~~~~~~~~v~~~~~~~-- 66 (291)
...|++++++|++..-++.+++++ .|+.|++|++ .+++.+..+.+|...+..++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 457888888888322234666644 3889999998 45888888888888888888887
Q ss_pred CCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEE------------EEEecCCcEEEEeccCc
Q psy10348 67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKI------------MSCGMDHSLKLWDLTKP 134 (291)
Q Consensus 67 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l------------~~~~~d~~i~v~d~~~~ 134 (291)
.++.+|++|+.|++|+|||+++|+++..+..-..+...+.+++|+|+|.++ ++|+.|++|++||..++
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 356899999999999999999999999983111123468888999999876 56788999999999988
Q ss_pred hhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCce
Q psy10348 135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNV 214 (291)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 214 (291)
+.+..+... + .++|...+.+..+++.++++++.|++|++||+.+++.
T Consensus 271 k~l~v~~~~--~---------------------p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~---------- 317 (356)
T 2w18_A 271 LSVGVMLYC--L---------------------PPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQC---------- 317 (356)
T ss_dssp EEEEEEEEC--C---------------------CTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSE----------
T ss_pred EEEEEEEee--c---------------------cCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcE----------
Confidence 865432110 0 1235555556666688999999999999999999855
Q ss_pred eeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348 215 TIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL 255 (291)
Q Consensus 215 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 255 (291)
+.++.+|...+.. .++++|||++|++|+.|++|+|||+
T Consensus 318 --l~tL~gH~~~vvs-~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 318 --TALLPPVSDQHWS-FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --EEEECCC--CCCC-EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred --EEEecCCCCCeEE-EEEECCCCCEEEEEECCCcEEEecC
Confidence 7888877665442 2355677999999999999999996
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=223.73 Aligned_cols=225 Identities=12% Similarity=0.153 Sum_probs=172.1
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-----------------------------eeEEEe-eeccce
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-----------------------------CVRHFY-GHGHAI 59 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-----------------------------~~~~~~-~~~~~v 59 (291)
...|.+++|+||+ +++|+++.|++|+ |.+.++ ....+. .|...|
T Consensus 15 ~~~v~sv~~SpDG----~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V 88 (588)
T 2j04_A 15 EDWKNNLTWARDG----TLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYP 88 (588)
T ss_dssp SSSSCCEEECTTS----CEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCE
T ss_pred hccEEEEEECCCC----CEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcE
Confidence 5889999999999 5999999999995 333222 111122 457889
Q ss_pred eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCC-----ceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348 60 NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD-----EVLSADFDLLGTKIMSCGMDHSLKLWDLTKP 134 (291)
Q Consensus 60 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 134 (291)
.+++|+| +|.+||+++.||.|++||.+. .+..+ . |.. .+.+++|+|+|++|++|+.||+|++||+.++
T Consensus 89 ~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l---~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 89 RVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNL---D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EEEEECS-SSSCEEEEETTSCEEEEETTE--EEEEC---C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred EEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeec---c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 9999999 999999999999999999543 55554 4 554 5999999999999999999999999999987
Q ss_pred hhh-------hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcccc
Q psy10348 135 EIK-------DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKEL 207 (291)
Q Consensus 135 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (291)
... .++.. ...+|...|.+++|+++-+++++.|++|++||+......
T Consensus 162 ~l~~~~~i~l~ti~~------------------------~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~-- 215 (588)
T 2j04_A 162 SENTPEFYFESSIRL------------------------SDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQ-- 215 (588)
T ss_dssp TTTCCCCEEEEEEEC------------------------SCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSC--
T ss_pred ccccccceeeeeeec------------------------ccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccc--
Confidence 531 11110 013488899999999333889999999999999876531
Q ss_pred ccCCCceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE--cc
Q psy10348 208 RTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL--SK 284 (291)
Q Consensus 208 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~ 284 (291)
....++ .+|...|..++|+ +++||+++ ++.|++||+.+++. ..+.. +|...|.+++| +|
T Consensus 216 -------~~~~tL~~~h~~~V~svaFs----g~~LASa~-~~tIkLWd~~~~~~-----~~~~~-gh~~~V~~va~~~s~ 277 (588)
T 2j04_A 216 -------PVSRMIQNASRRKITDLKIV----DYKVVLTC-PGYVHKIDLKNYSI-----SSLKT-GSLENFHIIPLNHEK 277 (588)
T ss_dssp -------CCEEEEECCCSSCCCCEEEE----TTEEEEEC-SSEEEEEETTTTEE-----EEEEC-SCCSCCCEEEETTCS
T ss_pred -------cceeeecccccCcEEEEEEE----CCEEEEEe-CCeEEEEECCCCeE-----EEEEc-CCCceEEEEEeeeCC
Confidence 113445 3677778877776 58999997 69999999998731 23332 68999999999 99
Q ss_pred CCceeeC
Q psy10348 285 NGNVLLC 291 (291)
Q Consensus 285 ~g~~l~s 291 (291)
|++.|++
T Consensus 278 d~~~La~ 284 (588)
T 2j04_A 278 ESTILLM 284 (588)
T ss_dssp SCEEEEE
T ss_pred CCCEEEE
Confidence 9988763
No 107
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.8e-32 Score=230.91 Aligned_cols=227 Identities=9% Similarity=0.089 Sum_probs=188.6
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccc-eeEEEEecC-CCcEEEEeecCCe
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHA-INELKFHPQ-DFNLLLSVSKDHT 80 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~-v~~~~~~~~-~~~~l~s~~~dg~ 80 (291)
..|.+.|.+++|+|++ ++|++++ ++.|++||++++ +....+.+|... |.+++|+|. ++++|++|+.||.
T Consensus 15 ~~~~~~v~~~~~spdg----~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~ 89 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTT----NAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK 89 (615)
T ss_dssp CCCTTCCCCCEEETTT----TEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred CCccCceeEEEECCCC----CEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCE
Confidence 3578999999999999 4899888 789999999999 889999999999 999999983 5689999999999
Q ss_pred EEEEECCCc--------ceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCC
Q psy10348 81 LRLWNIKTD--------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 81 i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
|++||+.++ +....+ ..|...|.+++|+|++++|++++.+ +.|++||. ++....
T Consensus 90 v~vw~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~~~--------- 155 (615)
T 1pgu_A 90 VIVWGWTFDKESNSVEVNVKSEF---QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSLGE--------- 155 (615)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEE---ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEEEE---------
T ss_pred EEEEeCCCCcccccccccccchh---hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCccee---------
Confidence 999999755 455555 6899999999999999999999987 68999983 332222
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC 225 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
..+|...|.+++|+ ++ ++++++.|+.|++||+.+.+ .+..+..|..
T Consensus 156 -------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~------------~~~~~~~~~~ 204 (615)
T 1pgu_A 156 -------------------VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK------------FSASDRTHHK 204 (615)
T ss_dssp -------------------CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE------------EEEEECSSSC
T ss_pred -------------------eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc------------eeeeecccCC
Confidence 23488999999999 43 89999999999999988763 3677777777
Q ss_pred ---cEEEEEEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc---ccccceeeeEEccCCceeeC
Q psy10348 226 ---EIWFIRFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP---RCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 226 ---~i~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~s 291 (291)
.+..++ ++|+ +++|++++.||.|++||+.+++. ...+. . .|...|.+++|+ ++++|++
T Consensus 205 ~~~~v~~~~--~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~-~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 205 QGSFVRDVE--FSPDSGEFVITVGSDRKISCFDGKSGEF----LKYIE-DDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp TTCCEEEEE--ECSTTCCEEEEEETTCCEEEEETTTCCE----EEECC-BTTBCCCSCEEEEEES-SSSEEEE
T ss_pred CCceEEEEE--ECCCCCCEEEEEeCCCeEEEEECCCCCE----eEEec-ccccccCCceEEEEEc-CCCEEEE
Confidence 776655 5588 99999999999999999998752 12221 2 688899999999 9988874
No 108
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-32 Score=251.02 Aligned_cols=233 Identities=19% Similarity=0.272 Sum_probs=197.3
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
..+...+.+++|+|++ .++++|+.+|.|++|++.+++....+.+|...|.+++|+| ++++|++++.||.|++||+
T Consensus 958 ~~~~~~i~~~~~sp~g----~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHL----EYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp EECCSCEEEEEECTTS----SEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEET
T ss_pred EcccCcEEEEEEcCCC----CEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEEC
Confidence 3456789999999998 4999999999999999999999999999999999999999 8999999999999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
.+++.... ..|...|.++.|+|++ .+++++.||.|++||+.+++....+
T Consensus 1033 ~~~~~~~~----~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~-------------------------- 1081 (1249)
T 3sfz_A 1033 QTGDYVFL----QAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDF-------------------------- 1081 (1249)
T ss_dssp TTTEEECC----BCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEE--------------------------
T ss_pred CCCceEEE----ecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEE--------------------------
Confidence 98877654 5899999999999965 6788999999999999988765444
Q ss_pred cccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 167 TRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
.+|...|.+++|+ ++++++++.|++|++||+.+... +..+.+|...|..++++ |++++|++|
T Consensus 1082 --~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~------------~~~l~~h~~~v~~~~~s--~dg~~lat~ 1145 (1249)
T 3sfz_A 1082 --TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP------------LHELKGHNGCVRCSAFS--LDGILLATG 1145 (1249)
T ss_dssp --ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC------------SBCCCCCSSCEEEEEEC--SSSSEEEEE
T ss_pred --cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce------------eeeeccCCCcEEEEEEC--CCCCEEEEE
Confidence 3488899999998 77999999999999999988754 66777888888776655 669999999
Q ss_pred cCCCcEEEEEcCCCCCCcceeE---EEeccccccceeeeEEccCCceeeC
Q psy10348 245 NQSGRTYVWDLDVQDPSSIKFQ---ILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 245 ~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+.||.|++||+.+++....... ......|.+.|++++|+|||++|++
T Consensus 1146 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s 1195 (1249)
T 3sfz_A 1146 DDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVS 1195 (1249)
T ss_dssp ETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEE
T ss_pred eCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEE
Confidence 9999999999999876543211 1112367889999999999999874
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=214.47 Aligned_cols=211 Identities=18% Similarity=0.247 Sum_probs=169.5
Q ss_pred eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348 8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL 81 (291)
Q Consensus 8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i 81 (291)
.|...|++++|+++ + .+|++|+.||.|++||+.+++ .+..+..|...|.+++|+| + +.+|++++.||.|
T Consensus 53 ~h~~~v~~~~~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFG----TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKV 127 (379)
T ss_dssp CCSSCEEEEEECCGGGC----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEE
T ss_pred CCCCcEEEEEeCCCCCC----CEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcE
Confidence 47899999999987 5 599999999999999999887 6777888999999999999 6 8999999999999
Q ss_pred EEEECCCcceeeeeccccCCCCceEEEEEcc-------------CCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDL-------------LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
++||+..+.....+ .+..|...|.+++|+| ++.+|++++.||.|++||++++.....+
T Consensus 128 ~v~d~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------- 198 (379)
T 3jrp_A 128 SVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------- 198 (379)
T ss_dssp EEEECCTTSCCCEE-EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE--------
T ss_pred EEEecCCCCceeeE-EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee--------
Confidence 99999877433221 1268999999999999 6899999999999999999876533211
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
.....+|...|.+++|+ +++|++++.|+.|++||++...... ...+.....+
T Consensus 199 ----------------~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-------~~~~~~~~~~ 255 (379)
T 3jrp_A 199 ----------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-------KKTLLKEEKF 255 (379)
T ss_dssp ----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC-------EEEESSSSCC
T ss_pred ----------------EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc-------eeeeeccccC
Confidence 12234589999999998 3589999999999999998764210 0112223335
Q ss_pred cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
...+..++ ++|++++|++++.||.|++|++..
T Consensus 256 ~~~v~~~~--~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 256 PDVLWRAS--WSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSCEEEEE--ECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCcEEEEE--EcCCCCEEEEecCCCcEEEEeCCC
Confidence 66666555 456799999999999999999984
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-30 Score=210.33 Aligned_cols=232 Identities=15% Similarity=0.227 Sum_probs=179.5
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecC--CCcEEEEeecCCeEEEEEC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ--DFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~ 86 (291)
|...|.+++|+|+.. .+|++++.||.|++||+.+++.+..+. +...+.++.|+|. ++.++++++.||.|++||+
T Consensus 98 ~~~~v~~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 98 HRYSVETVQWYPHDT---GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CSSCEEEEEECTTCT---TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred CCCcEEEEEEccCCC---cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 889999999999433 599999999999999999999888776 7788999999983 2349999999999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCchh-hhhhccccccCCCCccccccCccccCcc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPEI-KDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
++++.+..+ ..|...|.+++|+|+++ .|++++.||.|++||++++.. ...+... ........
T Consensus 174 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~~~~~~ 237 (408)
T 4a11_B 174 KSGSCSHIL---QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH-------------NGKKSQAV 237 (408)
T ss_dssp SSSCCCEEE---CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTT-------------TTCSCCCT
T ss_pred CCcceeeee---cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccc-------------ccccceee
Confidence 999888888 78999999999999998 588999999999999987652 2111100 00000111
Q ss_pred cccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC-------------------------------
Q psy10348 165 FSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE------------------------------- 211 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------------------------- 211 (291)
......|...|.+++|+ +++|++++.|+.|++||+.+.+........
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 317 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIA 317 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEE
T ss_pred ccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEE
Confidence 22234588999999998 779999999999999999876543211100
Q ss_pred ----CceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348 212 ----TNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS 262 (291)
Q Consensus 212 ----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 262 (291)
.....+..+.+|...|..++++ |++++|++|+.||.|++||+.+.+.+.
T Consensus 318 v~d~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHYKTVDCCVFQ--SNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEE--TTTTEEEEEETTSCEEEEEECC-----
T ss_pred EEECcCCcceeeeccCCCeEEEEEEc--CCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 2234566777888888877666 669999999999999999999987543
No 111
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.8e-31 Score=211.14 Aligned_cols=220 Identities=11% Similarity=0.195 Sum_probs=175.3
Q ss_pred eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCc---------ceeEEEeeeccceeEEEEecCC--CcEEEE
Q psy10348 8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFH---------ACVRHFYGHGHAINELKFHPQD--FNLLLS 74 (291)
Q Consensus 8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~---------~~~~~~~~~~~~v~~~~~~~~~--~~~l~s 74 (291)
.|...|++++|+|. + .+|++|+.||.|++||++++ +.+..+..|...|.+++|+| + +.+|++
T Consensus 55 ~~~~~v~~~~~~~~~d~----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~ 129 (351)
T 3f3f_A 55 AHDSSIVAIDWASPEYG----RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLAC 129 (351)
T ss_dssp CCSSCEEEEEECCGGGC----SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEE
T ss_pred cCCCcEEEEEEcCCCCC----CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEE
Confidence 47899999999994 5 59999999999999999877 55778889999999999999 7 899999
Q ss_pred eecCCeEEEEECCCcceeeeec----------cccCCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348 75 VSKDHTLRLWNIKTDICIAIFG----------GVEGHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPEIKDACA 141 (291)
Q Consensus 75 ~~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 141 (291)
++.||.|++||+++++.+..+. ....|...+.+++|+|+ +.++++++.|+.+.+|+...++...
T Consensus 130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--- 206 (351)
T 3f3f_A 130 LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV--- 206 (351)
T ss_dssp EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE---
T ss_pred ecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee---
Confidence 9999999999998876544331 01368889999999997 8999999999999888876654311
Q ss_pred cccccCCCCccccccCccccCcccccccccCcceeEEEEc--C----CEEEEecCCCeEEEecCCCCCcccccc------
Q psy10348 142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G----DFVLSKSCENCIICWKPGRLEDKELRT------ 209 (291)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~----~~l~~~~~d~~i~iwd~~~~~~~~~~~------ 209 (291)
.....+|...|.+++|+ + ++|++++.||.|++||++.........
T Consensus 207 -----------------------~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 263 (351)
T 3f3f_A 207 -----------------------AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNS 263 (351)
T ss_dssp -----------------------EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------
T ss_pred -----------------------eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccce
Confidence 12234589999999998 4 689999999999999998653221000
Q ss_pred ----------------------------CCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348 210 ----------------------------NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 210 ----------------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
.......+..+.+|...|..++|+ |++++|++|+.||.|++|++.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 264 NMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWN--LTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp ---------------------------CCSEEEEEEEEECTTSSCEEEEEEC--SSSCCEEEEETTSCEEEEEECTTSC
T ss_pred eccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEc--CCCCEEEEecCCCcEEEEecCcCcc
Confidence 011225567788888888877665 6699999999999999999998764
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-31 Score=210.99 Aligned_cols=192 Identities=10% Similarity=0.163 Sum_probs=147.7
Q ss_pred EEEecCCCeEEEEccC---------CcceeEEEe-eeccceeEEEEec-CCCcEEEEeecCCeEEEEECCCcceeeeecc
Q psy10348 29 LAVAGSRAVIRIFSPA---------FHACVRHFY-GHGHAINELKFHP-QDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97 (291)
Q Consensus 29 l~~~~~dg~i~vw~~~---------~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 97 (291)
+++++.|++|++|+.. +++.++.+. .|.++|.+++|+| .++.+|++++.||+|++||+++++......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~- 166 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS- 166 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC-
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-
Confidence 8999999999999765 445454444 6678999999998 246899999999999999999998866552
Q ss_pred ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh-hhhccccccCCCCccccccCccccCcccccccc-cCcce
Q psy10348 98 VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK-DACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYV 175 (291)
Q Consensus 98 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 175 (291)
..+...|.+++|+|++.+|++|+.||.|++||+++++.. ..+ .. |..+|
T Consensus 167 -~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~----------------------------~~~h~~~v 217 (343)
T 3lrv_A 167 -AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRF----------------------------PVDEEAKI 217 (343)
T ss_dssp -CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEEC----------------------------CCCTTSCE
T ss_pred -cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEE----------------------------eccCCCCE
Confidence 345668999999999999999999999999999988754 222 23 88999
Q ss_pred eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-CCcEEE
Q psy10348 176 DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-SGRTYV 252 (291)
Q Consensus 176 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg~i~v 252 (291)
.+++|+ +.+|++++ |+.|++||+++.+... .+..+..+...+...+++++|++++|++++. |+.|++
T Consensus 218 ~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 218 KEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL---------AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp EEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB---------SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce---------eecccccccccccceEEEECCCCCEEEEecCCCCcEEE
Confidence 999998 67999999 5599999999875521 1111112222222234677888999999998 999999
Q ss_pred EEcCCCCC
Q psy10348 253 WDLDVQDP 260 (291)
Q Consensus 253 wd~~~~~~ 260 (291)
|++.....
T Consensus 288 ~~~~~~~~ 295 (343)
T 3lrv_A 288 YKFDKKTK 295 (343)
T ss_dssp EEECTTTC
T ss_pred EEEccccc
Confidence 99976653
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.7e-31 Score=208.33 Aligned_cols=256 Identities=9% Similarity=0.041 Sum_probs=179.1
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWN 85 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd 85 (291)
-.|.+.|++++|+|++ .+||+|+.++ +++|++++++...... ...+..+++.+ +++.+ ++++.|++|++||
T Consensus 16 ~~h~~~V~~v~fs~dg----~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQ----SCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLH-RTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp ---CCCCCEEEECTTS----SEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECT-TSSEEEEECSSTTEEEEEE
T ss_pred ccCCCceEEEEECCCC----CEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcC-CCCEEEEEECCccEEEEEE
Confidence 3488999999999999 4999988775 7899998877655433 23588888988 55555 6788889999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc-hhhhhhcc----------cccc---CCCCc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP-EIKDACAE----------SYTF---NPARS 151 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~----------~~~~---~~~~~ 151 (291)
+.+++.+..+ .+...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. .+.+ ..++.
T Consensus 88 ~~~~~~~~~~----~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 88 DVKKQDVSRI----KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp TTTTEEEEEE----ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred CCCCcEEEEE----ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 9999998887 467799999998764 4443 4788999999887 54444331 0000 11222
Q ss_pred cccccCcccc--------------CcccccccccCcceeEEEEc--CCEEEEecCCCe-EEEecCCCCCccccccCCCce
Q psy10348 152 TRPFDTQKEH--------------FPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENC-IICWKPGRLEDKELRTNETNV 214 (291)
Q Consensus 152 ~~~~~~~~~~--------------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~ 214 (291)
...++..... .+....+.+|...|.+++|+ +++|++++.|++ |++||+++++.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~---------- 230 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL---------- 230 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE----------
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE----------
Confidence 2222222111 01155667899999999998 789999999998 99999998754
Q ss_pred eeeeeec-C-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee----------------EEEec-ccccc
Q psy10348 215 TIINRLN-F-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF----------------QILSH-PRCMS 275 (291)
Q Consensus 215 ~~~~~~~-~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----------------~~~~~-~~~~~ 275 (291)
+..+. + |...|..++|+ |++++|++++.|++|++||+......+... ..... .....
T Consensus 231 --~~~~~~g~h~~~v~~~~~s--~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T 3vu4_A 231 --VREFRRGLDRADVVDMKWS--TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV 306 (355)
T ss_dssp --EEEEECTTCCSCEEEEEEC--TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred --EEEEEcCCCCCcEEEEEEC--CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence 67776 4 77777776655 669999999999999999998764221100 00000 11122
Q ss_pred ceeeeEEccCCceeeC
Q psy10348 276 AVRQTTLSKNGNVLLC 291 (291)
Q Consensus 276 ~v~~~~~s~~g~~l~s 291 (291)
+...++|++||++|++
T Consensus 307 ~~~~~a~~~d~~~l~~ 322 (355)
T 3vu4_A 307 RGCKIAWISESSLVVV 322 (355)
T ss_dssp CCCEEEESSSSEEEEE
T ss_pred CceEEEEeCCCCEEEE
Confidence 3467899999998863
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-30 Score=210.87 Aligned_cols=224 Identities=17% Similarity=0.221 Sum_probs=180.2
Q ss_pred eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
++.++||+++ +||+|. |++|+|||..+++.+..+. +|...|++|+|+| ++++|++|+.||.|++||+++++
T Consensus 108 ~~~l~wS~~n-----~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 108 LNLVDWSSGN-----VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp CBCEEECTTS-----EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTE
T ss_pred ceeEEECCCC-----EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCc
Confidence 4678999754 888875 8999999999999887765 5678899999999 99999999999999999999999
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
.+..+ .+|...+.++.|+ +..|++|+.|+.+++||....... ...+.+
T Consensus 181 ~~~~~---~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~---------------------------~~~~~~ 228 (420)
T 4gga_A 181 RLRNM---TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHH---------------------------VATLSG 228 (420)
T ss_dssp EEEEE---CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE---------------------------EEEEEC
T ss_pred EEEEE---eCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccccee---------------------------eEEecc
Confidence 99888 7999999998875 679999999999999998765422 222345
Q ss_pred cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE--EcC
Q psy10348 171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV--GNQ 246 (291)
Q Consensus 171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~--~~~ 246 (291)
|...+..+.+. +.++++++.|+.+++|+....+... ..+.....+...|..+++++. +..++++ |+.
T Consensus 229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~--------~~~~~~~~~~~~V~~~~~~p~-~~~~la~~~gs~ 299 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW--------VPLQTFTQHQGAVKAVAWCPW-QSNVLATGGGTS 299 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS--------CCSEEECCCSSCEEEEEECTT-CTTEEEEEECTT
T ss_pred cccceeeeeecCCCCeeeeeeccccceEEeeccccccc--------eeeeeecccCCceeeeeeCCC-cccEEEEEeecC
Confidence 88999999998 7899999999999999998764321 224566777888888777653 2455554 458
Q ss_pred CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
|++|++||+.+++. ...+. +...+.++.|+|+++.|++
T Consensus 300 D~~I~iwd~~t~~~----~~~~~---~~~~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 300 DRHIRIWNVCSGAC----LSAVD---AHSQVCSILWSPHYKELIS 337 (420)
T ss_dssp TCEEEEEETTTTEE----EEEEE---CSSCEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCcccc----ceeec---cccceeeeeecCCCCeEEE
Confidence 99999999998842 22332 3458999999999998863
No 115
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.4e-31 Score=212.08 Aligned_cols=210 Identities=14% Similarity=0.133 Sum_probs=161.3
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEEEECCC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~ 88 (291)
...|.+++|+|++ .+|++|+.||.|++||+ +++.+..+.+|...|.+++|+| ++. +|++++.|+.|++||+++
T Consensus 163 ~~~v~~~~~~~~~----~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 163 DYWYCCVDVSVSR----QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp SCCEEEEEEETTT----TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCeEEEEECCCC----CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCC
Confidence 4779999999998 59999999999999999 5788889999999999999999 667 999999999999999997
Q ss_pred ----cceeeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 89 ----DICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 89 ----~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
+..+..+ +|...|.+++|+| ++.+|++++.|+.|++||+++++....+......... +..
T Consensus 237 ~~~~~~~~~~~----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----------~~~ 301 (383)
T 3ei3_B 237 IKDKNSYIAEM----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ-----------HLT 301 (383)
T ss_dssp CCSTTCEEEEE----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT-----------TSC
T ss_pred CCcccceEEEe----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc-----------ccc
Confidence 5555554 6999999999999 9999999999999999999998876554421110000 000
Q ss_pred ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC--cccEEEEEEEecCCCc
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK--DCEIWFIRFSMDYWQK 239 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~ 239 (291)
.+...-.....+..++|+ +.+ +++.|+.|++||+.+++. +..+..+ ...+..+ +++|+++
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~------------~~~l~~~~~~~~~~~~--~~s~~g~ 365 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL------------VHQLRDPNAAGIISLN--KFSPTGD 365 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE------------EEEECBTTBCSCCCEE--EECTTSS
T ss_pred ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce------------eeeecCCCCCceEEEE--EEecCcc
Confidence 000000112345556666 444 888999999999988754 5666653 3444444 4557799
Q ss_pred EEEEEcCCCcEEEEEcCC
Q psy10348 240 ILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~ 257 (291)
+|++|+ ||.|++||+++
T Consensus 366 ~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 366 VLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEEE-TTEEEEEECC-
T ss_pred EEEEec-CCcEEEEecCC
Confidence 999997 99999999875
No 116
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=1.1e-30 Score=212.83 Aligned_cols=215 Identities=16% Similarity=0.292 Sum_probs=171.2
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-------eEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-------VRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
.|...|++++|+|++. .+|++|+.||.|++|++.++.. ...+.+|...|.+++|+|.++.+|++++.||.
T Consensus 179 ~h~~~v~~l~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~ 255 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLN---GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK 255 (430)
T ss_dssp CCSSCCCCEEECTTST---TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred CCCCCeEEEEeCCCCC---CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence 5788999999999974 4999999999999999987322 45677899999999999977889999999999
Q ss_pred EEEEECCCc---ceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccCch-hhhhhccccccCCCCccccc
Q psy10348 81 LRLWNIKTD---ICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPF 155 (291)
Q Consensus 81 i~vwd~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~ 155 (291)
|++||++++ +.+..+ ..|...|++++|+|++. +|++|+.||.|++||+++.. .+.
T Consensus 256 i~i~d~~~~~~~~~~~~~---~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~----------------- 315 (430)
T 2xyi_A 256 LMIWDTRNNNTSKPSHTV---DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH----------------- 315 (430)
T ss_dssp EEEEETTCSCSSSCSEEE---ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE-----------------
T ss_pred EEEEECCCCCCCcceeEe---ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE-----------------
Confidence 999999977 455555 68999999999999987 68899999999999998743 222
Q ss_pred cCccccCcccccccccCcceeEEEEc--C-CEEEEecCCCeEEEecCCCCCccccc--cCCCceeeeeeecCCcccEEEE
Q psy10348 156 DTQKEHFPQFSTRDIHRNYVDCVRWL--G-DFVLSKSCENCIICWKPGRLEDKELR--TNETNVTIINRLNFKDCEIWFI 230 (291)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~ 230 (291)
.+..|...|.+++|+ + .+|++++.|+.|++||+......... ........+..+.+|...+..+
T Consensus 316 -----------~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 316 -----------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 384 (430)
T ss_dssp -----------EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEE
T ss_pred -----------EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEE
Confidence 223488999999998 4 47999999999999999774321000 0001113466677788777766
Q ss_pred EEEecCCCc-EEEEEcCCCcEEEEEcCCC
Q psy10348 231 RFSMDYWQK-ILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 231 ~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 258 (291)
+|+ |++. +|++++.||.|++|++...
T Consensus 385 ~~~--p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 385 SWN--PNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEC--SSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEC--CCCCCEEEEEECCCCEEEeEcccc
Confidence 554 6688 8999999999999999764
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=3.2e-30 Score=201.70 Aligned_cols=204 Identities=17% Similarity=0.237 Sum_probs=161.9
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe----------------------------------
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY---------------------------------- 53 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---------------------------------- 53 (291)
.|...|++++|+|++ ++|++|+.||+|++||+++++.+..+.
T Consensus 65 ~~~~~V~~v~~~~~~----~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 65 QPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp STTCCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred CCCCeEEEEEECCCC----CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc
Confidence 366789999999999 499999999999999999877655443
Q ss_pred -------eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee-ccccCCCCceEEEEEccCCCEE---EEEec
Q psy10348 54 -------GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF-GGVEGHRDEVLSADFDLLGTKI---MSCGM 122 (291)
Q Consensus 54 -------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l---~~~~~ 122 (291)
+|...+..+.+++ ++.+|++++.||.|++||+++++..... .....+...|.++.++|++..+ ++++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred eeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 4556677777888 8899999999999999999877543211 1125788899999999987643 45677
Q ss_pred CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE--ecCCCeEEEec
Q psy10348 123 DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS--KSCENCIICWK 198 (291)
Q Consensus 123 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~--~~~d~~i~iwd 198 (291)
++.|++||.+......... +...+..+.|. ++.+++ |+.|+.|++||
T Consensus 220 ~~~i~lwd~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd 270 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVD-----------------------------AHSQVCSILWSPHYKELISGHGFAQNQLVIWK 270 (318)
T ss_dssp TCEEEEEETTTCCEEEEEE-----------------------------CSSCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEeccccccccccc-----------------------------ceeeeeeeeecccccceEEEEEcCCCEEEEEE
Confidence 8999999998876543322 66678888887 555544 45799999999
Q ss_pred CCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 199 PGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
+++++. +..+.+|...|..++|+ |++++|++|+.||+|+|||+...+
T Consensus 271 ~~~~~~------------~~~l~gH~~~V~~l~~s--pdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 271 YPTMAK------------VAELKGHTSRVLSLTMS--PDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTTCCE------------EEEECCCSSCEEEEEEC--TTSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCCcE------------EEEEcCCCCCEEEEEEc--CCCCEEEEEecCCeEEEEECCCCC
Confidence 998744 88899999998877665 669999999999999999998754
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.5e-31 Score=228.75 Aligned_cols=211 Identities=18% Similarity=0.253 Sum_probs=169.8
Q ss_pred eecceeEEEEeeec--cCCCCCEEEEecCCCeEEEEccCCcc--eeEEEeeeccceeEEEEecCC--CcEEEEeecCCeE
Q psy10348 8 LIEENFYTCAWSMD--LESGRPLLAVAGSRAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQD--FNLLLSVSKDHTL 81 (291)
Q Consensus 8 ~~~~~i~~~~~s~~--~~~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i 81 (291)
.|.++|++++|+|+ + .+|++|+.||.|++||+.+++ .+..+.+|...|.+++|+| + +.++++|+.||.|
T Consensus 51 ~h~~~V~~l~~s~~~~~----~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I 125 (753)
T 3jro_A 51 GHEGPVWRVDWAHPKFG----TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKV 125 (753)
T ss_dssp CCSSCEEEEEECCTTSC----SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEE
T ss_pred CCcCceEEEEecCCCCC----CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcE
Confidence 47899999999988 5 599999999999999999886 6777888999999999999 6 8999999999999
Q ss_pred EEEECCCcceeeeeccccCCCCceEEEEEcc-------------CCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDL-------------LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
++||+.++...... .+.+|...|.+++|+| ++.+|++|+.||.|++||++++......
T Consensus 126 ~vwdl~~~~~~~~~-~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~-------- 196 (753)
T 3jro_A 126 SVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------- 196 (753)
T ss_dssp EEEECCSSSCCCCE-EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE--------
T ss_pred EEEEeecCCCccee-EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee--------
Confidence 99999877432221 1268999999999999 5899999999999999999876432111
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
.....+|...|.+++|+ ++++++++.||.|++||++....... ..+.....+
T Consensus 197 ----------------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~-------~~~~~~~~~ 253 (753)
T 3jro_A 197 ----------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK-------KTLLKEEKF 253 (753)
T ss_dssp ----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB-------CCBSSSSCC
T ss_pred ----------------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce-------eEEeccCCC
Confidence 12234589999999998 45899999999999999987642100 112333445
Q ss_pred cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 224 DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 224 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
...+..+++ +|++++|++|+.||.|++|++..
T Consensus 254 ~~~v~~l~~--spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 254 PDVLWRASW--SLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCCCEEE--CTTTCCEEEECSSSCEECCBCCS
T ss_pred CCceEEEEE--cCCCCEEEEEcCCCEEEEEecCC
Confidence 666665555 56799999999999999999985
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6e-30 Score=205.95 Aligned_cols=226 Identities=10% Similarity=0.045 Sum_probs=150.8
Q ss_pred eecceeEEEEeeeccC----CCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 8 LIEENFYTCAWSMDLE----SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~----~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
.|.+.|++++|+|... .++++||+|+.|++|+|||+.++..+..+..|..+|.+++|+|.++.+|++|+.||+|++
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~ 213 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI 213 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE
Confidence 4889999999998211 123699999999999999999888888888899999999999944568999999999999
Q ss_pred EECCCcceeeeec----------------------cccCCCCceEEEEEc-cCCCEEEEEecCCcEEEEeccCchhhhhh
Q psy10348 84 WNIKTDICIAIFG----------------------GVEGHRDEVLSADFD-LLGTKIMSCGMDHSLKLWDLTKPEIKDAC 140 (291)
Q Consensus 84 wd~~~~~~~~~~~----------------------~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 140 (291)
||+++++...... ...+|...+.++.|+ |+++.|++++.|+++++||+..++....+
T Consensus 214 wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 214 FDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp EETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred EECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence 9998775433221 124677889999986 79999999999999999999888765554
Q ss_pred ccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeee
Q psy10348 141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTII 217 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 217 (291)
.......... ...+.......+...+..+.+. +.++++|+.||+|++||+.+++. +
T Consensus 294 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~------------~ 352 (393)
T 4gq1_A 294 SDSTMKLGPK---------NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS------------N 352 (393)
T ss_dssp -------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC------------C
T ss_pred eeecCccccE---------EEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE------------E
Confidence 3211100000 0001111111122223333332 33678889999999999988755 4
Q ss_pred eeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 218 NRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
.....+...|..+ +++|||++||+++.+| +.+|.+..
T Consensus 353 ~~~~~~~~~V~sv--afspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 353 SIPIQLGMPIVDF--CWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp EEEEECSSCEEEE--EECTTSSEEEEEESSE-EEEEEEGG
T ss_pred EEecCCCCcEEEE--EEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 4455566677655 4557799999999776 66666543
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=9.9e-29 Score=189.20 Aligned_cols=212 Identities=13% Similarity=0.087 Sum_probs=145.4
Q ss_pred EEEEecCCCeEEEEccCCc---ceeEEEeeecc-------------------------ceeEEEEecCC----CcEEEEe
Q psy10348 28 LLAVAGSRAVIRIFSPAFH---ACVRHFYGHGH-------------------------AINELKFHPQD----FNLLLSV 75 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~-------------------------~v~~~~~~~~~----~~~l~s~ 75 (291)
.++++++ ..|++|+..++ ++++++..|+. .|.+++|+| + +..++++
T Consensus 56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp-d~~~~~~~l~s~ 133 (356)
T 2w18_A 56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS-DDESEKQVLLKS 133 (356)
T ss_dssp EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-------CCEEEEEE
T ss_pred EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC-CccccccEEEeC
Confidence 6777776 58999999988 77888777664 556667777 6 6677765
Q ss_pred ec--------------------CCeEEEEEC-CCcceeeeeccccCCCCceEEEEEcc---CCCEEEEEecCCcEEEEec
Q psy10348 76 SK--------------------DHTLRLWNI-KTDICIAIFGGVEGHRDEVLSADFDL---LGTKIMSCGMDHSLKLWDL 131 (291)
Q Consensus 76 ~~--------------------dg~i~vwd~-~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~v~d~ 131 (291)
+. |+.|++|++ .+|+.+..+ ..|...++.++|++ ++.+|++++.|++|++||+
T Consensus 134 g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~---~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl 210 (356)
T 2w18_A 134 GNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQ---FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNL 210 (356)
T ss_dssp EEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEE---EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEET
T ss_pred CCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeee---ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEEC
Confidence 53 777888887 446666655 57788888888888 6688999999999999999
Q ss_pred cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCE------------EEEecCCCeEEEe
Q psy10348 132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDF------------VLSKSCENCIICW 197 (291)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~------------l~~~~~d~~i~iw 197 (291)
.+++++.++.... .+...+.+++|+ |.+ +++|+.|++|++|
T Consensus 211 ~TGk~l~tL~g~~-------------------------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 211 KTGQLLKKMHIDD-------------------------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp TTCCEEEEEECCC----------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred CCCcEEEEEcCCC-------------------------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 9999877764200 012345555666 433 4678899999999
Q ss_pred cCCCCCccccccCCCceeeeeee-----cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc
Q psy10348 198 KPGRLEDKELRTNETNVTIINRL-----NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR 272 (291)
Q Consensus 198 d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 272 (291)
|..+++. +..+ .+|... .+...++ +.++|+|+.||+|+|||+.+++. ...+. +
T Consensus 266 d~~tgk~------------l~v~~~~~p~Gh~~~--~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~----l~tL~--g 323 (356)
T 2w18_A 266 NPKTTLS------------VGVMLYCLPPGQAGR--FLEGDVK--DHCAAAILTSGTIAIWDLLLGQC----TALLP--P 323 (356)
T ss_dssp ETTTTEE------------EEEEEECCCTTCCCC--EEEEEEE--TTEEEEEETTSCEEEEETTTCSE----EEEEC--C
T ss_pred ECCCCEE------------EEEEEeeccCCCcce--eEccccC--CCEEEEEcCCCcEEEEECCCCcE----EEEec--C
Confidence 9988754 2222 234333 2333444 88999999999999999999853 23443 5
Q ss_pred ccccee-eeEEccCCceeeC
Q psy10348 273 CMSAVR-QTTLSKNGNVLLC 291 (291)
Q Consensus 273 ~~~~v~-~~~~s~~g~~l~s 291 (291)
|...+. +++|||||++|++
T Consensus 324 H~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 324 VSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp C--CCCCEEEECSSSSEEEE
T ss_pred CCCCeEEEEEECCCCCEEEE
Confidence 666555 5899999999985
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4.6e-28 Score=194.95 Aligned_cols=224 Identities=9% Similarity=0.046 Sum_probs=172.8
Q ss_pred eeeecceeEEEEeeeccCCCCCEE-EEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCeEEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLL-AVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHTLRL 83 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~i~v 83 (291)
.+.+...+.+++|+|++. ++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+| ++++|+ +++.++.|++
T Consensus 27 ~~~~~~~~~~~~~s~dg~----~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp-dg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 27 TIPVGSNPMGAVISPDGT----KVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP-DGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEECSSSEEEEEECTTSS----EEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEETTTTEEEE
T ss_pred EeecCCCcceEEECCCCC----EEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC-CCCEEEEEECCCCEEEE
Confidence 344566789999999985 55 777799999999999999988887554 899999999 777665 5556799999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEE-EEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKI-MSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
||+.+++.+..+ .+...+.+++|+|+++.+ ++++.|+.|++||+.+++....+.
T Consensus 101 ~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------------------- 155 (391)
T 1l0q_A 101 IDTTSNTVAGTV----KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS--------------------- 155 (391)
T ss_dssp EETTTTEEEEEE----ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---------------------
T ss_pred EECCCCeEEEEE----eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe---------------------
Confidence 999999888776 344578999999999977 678889999999999887654433
Q ss_pred cccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 163 PQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
....+.+++|+ ++++ ++++.|+.|++||+++.+. +..+..+ ..+. .++++|+++
T Consensus 156 --------~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~-~~~~--~~~~~~~g~ 212 (391)
T 1l0q_A 156 --------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV------------IDTVKVE-AAPS--GIAVNPEGT 212 (391)
T ss_dssp --------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE------------EEEEECS-SEEE--EEEECTTSS
T ss_pred --------cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE------------EEEEecC-CCcc--ceEECCCCC
Confidence 23446888898 5555 6778899999999988743 3444332 3344 455667899
Q ss_pred EEEEEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 240 ILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 240 ~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+|++++ .++.|++||+.+++. ...+. .+ ..+.+++|+|+|++|+
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~----~~~~~--~~-~~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKI----TARIP--VG-PDPAGIAVTPDGKKVY 259 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEE----EEEEE--CC-SSEEEEEECTTSSEEE
T ss_pred EEEEEecCcCCCcEEEEECCCCeE----EEEEe--cC-CCccEEEEccCCCEEE
Confidence 999888 689999999998742 23333 22 3578999999999873
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.4e-28 Score=198.31 Aligned_cols=223 Identities=13% Similarity=0.024 Sum_probs=177.3
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEEC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNI 86 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~ 86 (291)
.|...|.+++|++++ .++++++.|+.|++||+++++.+..+..|...+.+++|+| ++..+ ++++.|+.|++||+
T Consensus 167 ~~~~~v~~~~~~~~~----~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 167 KKLGFVETISIPEHN----ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp TTCCEEEEEEEGGGT----EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEET
T ss_pred ccCCceeEEEEcCCC----EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEEC
Confidence 356789999999888 4999999999999999999999999988999999999999 77766 55558999999999
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEe--------cCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG--------MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
++++.+..+ .+...+.+++|+|+++++++++ .|+.|++||+++++....+.
T Consensus 242 ~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~----------------- 300 (433)
T 3bws_A 242 KTKLEIRKT----DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG----------------- 300 (433)
T ss_dssp TTTEEEEEC----CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-----------------
T ss_pred CCCcEEEEe----cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-----------------
Confidence 999887776 3345699999999999999888 48899999999876544332
Q ss_pred cccCcccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348 159 KEHFPQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD 235 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (291)
|...+.+++|+ ++ ++++++.|+.|++||+.+.+. +..+. +...+. .++++
T Consensus 301 ------------~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~------------~~~~~-~~~~~~--~~~~s 353 (433)
T 3bws_A 301 ------------PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV------------QKSIP-VFDKPN--TIALS 353 (433)
T ss_dssp ------------EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE------------EEEEE-CSSSEE--EEEEC
T ss_pred ------------CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE------------EEEec-CCCCCC--eEEEc
Confidence 55578889998 54 557778999999999987643 44444 333444 45566
Q ss_pred CCCcEEEEEcC---------------CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 236 YWQKILAVGNQ---------------SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 236 ~~~~~l~~~~~---------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
|++++|++++. ||.|++||+.+++. ...+.. ...+.+++|+|+|++|+
T Consensus 354 ~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~----~~~~~~---~~~~~~~~~s~dg~~l~ 416 (433)
T 3bws_A 354 PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV----KEFWEA---GNQPTGLDVSPDNRYLV 416 (433)
T ss_dssp TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE----EEEEEC---SSSEEEEEECTTSCEEE
T ss_pred CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE----EEEecC---CCCCceEEEcCCCCEEE
Confidence 77999988876 57999999988742 233332 35789999999999886
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.8e-28 Score=198.85 Aligned_cols=223 Identities=9% Similarity=0.006 Sum_probs=174.6
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-----EeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-----FYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
....+.+++|+|++ .++++++.++.|++||+.+++.+.. +.+|...|.+++|+| ++.++++++.|+.|++
T Consensus 121 ~~~~~~~~~~s~~~----~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~ 195 (433)
T 3bws_A 121 TGFQPKSVRFIDNT----RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHV 195 (433)
T ss_dssp CSSCBCCCEESSSS----EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEE
T ss_pred CCCCceEEEEeCCC----eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEE
Confidence 44567789999955 5888888899999999999988763 346788999999998 8899999999999999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
||+++++.+..+ ..|...+.+++|+|++++++++ +.|+.|++||+++++....+.
T Consensus 196 ~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~--------------------- 251 (433)
T 3bws_A 196 FDLKTLAYKATV---DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD--------------------- 251 (433)
T ss_dssp EETTTCCEEEEE---ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC---------------------
T ss_pred EECCCceEEEEE---cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec---------------------
Confidence 999999888887 6788999999999999988554 479999999999887654432
Q ss_pred cccccccccCcceeEEEEc--CCEEEEec--------CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348 163 PQFSTRDIHRNYVDCVRWL--GDFVLSKS--------CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF 232 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 232 (291)
+...+.+++|+ ++++++++ .|+.|++||+++++. +..+ .+...+.. +
T Consensus 252 --------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~------------~~~~-~~~~~~~~--~ 308 (433)
T 3bws_A 252 --------KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL------------IDTI-GPPGNKRH--I 308 (433)
T ss_dssp --------CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE------------EEEE-EEEECEEE--E
T ss_pred --------CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE------------Eeec-cCCCCcce--E
Confidence 33458899998 66888877 588999999987643 3322 12223333 4
Q ss_pred EecCCCcEE-EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 233 SMDYWQKIL-AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 233 ~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+++|+++.+ ++++.|+.|++||+.+++. ...+ .+...+.+++|+|+|++|+
T Consensus 309 ~~~~~g~~l~~~~~~~~~v~v~d~~~~~~----~~~~---~~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 309 VSGNTENKIYVSDMCCSKIEVYDLKEKKV----QKSI---PVFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EECSSTTEEEEEETTTTEEEEEETTTTEE----EEEE---ECSSSEEEEEECTTSSEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEECCCCcE----EEEe---cCCCCCCeEEEcCCCCEEE
Confidence 556778655 6668999999999997642 2333 2456799999999999876
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.4e-28 Score=194.75 Aligned_cols=215 Identities=9% Similarity=0.116 Sum_probs=154.4
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEE--ecCCCcEEEEeecCCeEEE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKF--HPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg~i~v 83 (291)
...|...|++++|+|++ ++|++++.||.|++||+++++.+. +..|...|.+++| +| ++.+|++++.||.|++
T Consensus 82 ~~~h~~~v~~~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~v 155 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDG----SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKF 155 (368)
T ss_dssp EEECSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEE
T ss_pred eccccCCEEEEEECcCC----CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEE
Confidence 34578999999999988 599999999999999999888766 5679999999999 88 8899999999999999
Q ss_pred EECCCcceeeeeccccCCC-----------------------------------------CceEEEEEccCCCE----EE
Q psy10348 84 WNIKTDICIAIFGGVEGHR-----------------------------------------DEVLSADFDLLGTK----IM 118 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~-----------------------------------------~~i~~~~~~~~~~~----l~ 118 (291)
||+++++.+..+ ..+. ..+.++.+.++... ++
T Consensus 156 wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 156 WDTRSSNPMMVL---QLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp ECSSCSSCSEEE---ECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred EECCCCcEEEEE---ecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 999988877665 2222 22233333333222 55
Q ss_pred EEecCCcEEEEeccCchh---hhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCe
Q psy10348 119 SCGMDHSLKLWDLTKPEI---KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENC 193 (291)
Q Consensus 119 ~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~ 193 (291)
+++.||.|++||++.... ...+..+.. .........|...|.+++|+ +++|++++.||.
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 296 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRS----------------NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR 296 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEE----------------C----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeec----------------ccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence 566666666666655422 111110000 00000111233479999998 679999999999
Q ss_pred EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 194 IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 194 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
|++||+.+++ .+..+..|...+..++|+ |++++|++|+.|+..+.|++...+
T Consensus 297 i~iwd~~~~~------------~~~~~~~~~~~v~~~~~s--~~g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 297 FSFWDKDART------------KLKTSEQLDQPISACCFN--HNGNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp EEEEETTTTE------------EEEECCCCSSCEEEEEEC--TTSSCEEEEECCCSTTCGGGCCTT
T ss_pred EEEEECCCCc------------EEEEecCCCCCceEEEEC--CCCCeEEEEecccccccccccCCC
Confidence 9999998874 477888888888776655 669999999999877777766554
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.6e-27 Score=190.55 Aligned_cols=207 Identities=9% Similarity=0.014 Sum_probs=162.7
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceeeeeccccCCCCce
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEV 105 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i 105 (291)
.++++++.|+.|++||+++++.+..+..|. .+.+++|+| +++++ ++++.|+.|++||+.+++.+..+ ..+ ..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~~-~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATV---PAG-SSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECS-SSE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEE---ECC-CCc
Confidence 478889999999999999999998888664 589999999 77765 67779999999999999988877 333 499
Q ss_pred EEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348 106 LSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G 182 (291)
Q Consensus 106 ~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 182 (291)
.+++|+|++++|+.+ +.++.|++||+.+++....+. +...+.+++|+ +
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-----------------------------~~~~~~~~~~s~dg 127 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-----------------------------TGKSPLGLALSPDG 127 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------------------------CSSSEEEEEECTTS
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-----------------------------CCCCcceEEECCCC
Confidence 999999999987654 467999999999887654432 34457899998 5
Q ss_pred CEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE-EEEcCCCcEEEEEcCCCCC
Q psy10348 183 DFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL-AVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 183 ~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~ 260 (291)
+++ ++++.|+.|++||+.+++. +..+..+.. +. .++++|++++| ++++.|+.|++||+.+++.
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~~~-~~--~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVTKAV------------INTVSVGRS-PK--GIAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEE------------EEEEECCSS-EE--EEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CEEEEEeCCCCEEEEEECCCCcE------------EEEEecCCC-cc--eEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 555 7888899999999987743 455554433 33 45566779887 6778899999999998742
Q ss_pred CcceeEEEeccccccceeeeEEccCCceee
Q psy10348 261 SSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
...+. +...+.+++|+|+|++|+
T Consensus 193 ----~~~~~---~~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 193 ----IDTVK---VEAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp ----EEEEE---CSSEEEEEEECTTSSEEE
T ss_pred ----EEEEe---cCCCccceEECCCCCEEE
Confidence 23332 346889999999999876
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3.4e-27 Score=187.39 Aligned_cols=214 Identities=10% Similarity=0.113 Sum_probs=155.5
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC---------------------
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF--------------------- 69 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------------- 69 (291)
..+..+++.++.+ .++++++.|++|++||..+++.+..+. +..+|.+++|++ +.
T Consensus 59 ~~~~~~~~~~~~~---~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~-~~~~~~~~~~i~i~d~~~~~~~~ 133 (355)
T 3vu4_A 59 RHLSKVRMLHRTN---YVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR-EFIVVSYGDVISVFKFGNPWKRI 133 (355)
T ss_dssp SCCCEEEECTTSS---EEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS-SEEEEEETTEEEEEESSTTCCBS
T ss_pred CCeEEEEEcCCCC---EEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC-CEEEEEEcCEEEEEECCCCceee
Confidence 3577788887764 234678888999999999999988886 667899998887 32
Q ss_pred --------------cEEEE--eecCCeEEEEECCCcc----------------eeeeeccccCCCCceEEEEEccCCCEE
Q psy10348 70 --------------NLLLS--VSKDHTLRLWNIKTDI----------------CIAIFGGVEGHRDEVLSADFDLLGTKI 117 (291)
Q Consensus 70 --------------~~l~s--~~~dg~i~vwd~~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l 117 (291)
.+++. |+.||.|++||+.+++ .+..+ .+|...|.+++|+|++++|
T Consensus 134 ~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~---~~h~~~v~~~~~s~~g~~l 210 (355)
T 3vu4_A 134 TDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI---KAHTNPIKMVRLNRKSDMV 210 (355)
T ss_dssp SCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEE---CCCSSCEEEEEECTTSSEE
T ss_pred EEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE---EccCCceEEEEECCCCCEE
Confidence 12333 5778888888888654 14445 7999999999999999999
Q ss_pred EEEecCCc-EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc-cCcceeEEEEc--CCEEEEecCCCe
Q psy10348 118 MSCGMDHS-LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYVDCVRWL--GDFVLSKSCENC 193 (291)
Q Consensus 118 ~~~~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~~~~~d~~ 193 (291)
++|+.|++ |++||+++++.+..+. .+ |...|.+++|+ +++|++++.|++
T Consensus 211 ~s~s~d~~~v~iwd~~~~~~~~~~~---------------------------~g~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 211 ATCSQDGTIIRVFKTEDGVLVREFR---------------------------RGLDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp EEEETTCSEEEEEETTTCCEEEEEE---------------------------CTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEE---------------------------cCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence 99999998 9999999988665543 13 88899999998 779999999999
Q ss_pred EEEecCCCCCccccccCCC--------ceeeeee--ecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348 194 IICWKPGRLEDKELRTNET--------NVTIINR--LNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS 261 (291)
Q Consensus 194 i~iwd~~~~~~~~~~~~~~--------~~~~~~~--~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 261 (291)
|++||++............ ....... +.. ..... ..+++++++++|++++.||.+++|++..++..
T Consensus 264 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 264 LHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRG--CKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp EEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCC--CEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred EEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCc--eEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 9999997653221100000 0000001 111 11111 23566788999999999999999999876543
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1e-25 Score=182.42 Aligned_cols=220 Identities=13% Similarity=-0.017 Sum_probs=166.8
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCC---eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCe--
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRA---VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHT-- 80 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg---~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~-- 80 (291)
..|...+.+++|+|++ +.|++++.++ .|++||+++++.. .+..|...+.+++|+| +++.|+ +++.++.
T Consensus 175 ~~~~~~v~~~~~Spdg----~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 175 HRSPQPLMSPAWSPDG----SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLN 248 (415)
T ss_dssp EEESSCEEEEEECTTS----SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECTTSSCE
T ss_pred eCCCCcceeeEEcCCC----CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEEEEecCCCce
Confidence 3578899999999999 4999988775 9999999988865 5667888999999999 888777 6666654
Q ss_pred EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
|++||+.+++.. .+ ..|...+.+++|+|+|++|++++. ++ .|.+||+.+++... +
T Consensus 249 i~~~d~~~~~~~-~l---~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l----------------- 306 (415)
T 2hqs_A 249 LYVMDLASGQIR-QV---TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-I----------------- 306 (415)
T ss_dssp EEEEETTTCCEE-EC---CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-C-----------------
T ss_pred EEEEECCCCCEE-eC---cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-E-----------------
Confidence 999999987763 44 578889999999999999988876 45 57777887765321 1
Q ss_pred ccccCcccccccccCcceeEEEEc--CCEEEEecCC---CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF 232 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 232 (291)
..+...+.+++|+ |++|++++.+ ..|.+||+.+++. ..+..+. .+. .+
T Consensus 307 -----------~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-------------~~l~~~~-~~~--~~ 359 (415)
T 2hqs_A 307 -----------TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-------------QVLSSTF-LDE--TP 359 (415)
T ss_dssp -----------CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-------------EECCCSS-SCE--EE
T ss_pred -----------ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-------------EEecCCC-CcC--Ce
Confidence 1255678889998 7788777654 6899999987643 2233332 344 34
Q ss_pred EecCCCcEEEEEcCCC---cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348 233 SMDYWQKILAVGNQSG---RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV 288 (291)
Q Consensus 233 ~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 288 (291)
+++|+|++|++++.++ .|++||+..+. ......|.+.|.+++|+|.-.+
T Consensus 360 ~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-------~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 360 SLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-------KARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETTSCC-------EEECCCSSSEEEEEEECCCCCC
T ss_pred EEcCCCCEEEEEEcCCCccEEEEEECCCCc-------EEEeeCCCCCCcCCcccccccc
Confidence 5668899999998777 79999997542 2233467789999999997543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=2.6e-24 Score=174.13 Aligned_cols=206 Identities=14% Similarity=0.095 Sum_probs=155.2
Q ss_pred CEEEEecCC------CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC---eEEEEECCCcceeeeecc
Q psy10348 27 PLLAVAGSR------AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH---TLRLWNIKTDICIAIFGG 97 (291)
Q Consensus 27 ~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~ 97 (291)
..++.++.+ +.|++||++ +...+.+..|...+.+++|+| +++.|++++.++ .|++||+.+++... +
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~-l-- 218 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQ-V-- 218 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEE-E--
T ss_pred CEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEE-e--
Confidence 466666554 799999997 555678888999999999999 999999998875 99999999887754 3
Q ss_pred ccCCCCceEEEEEccCCCEEE-EEecCCc--EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcc
Q psy10348 98 VEGHRDEVLSADFDLLGTKIM-SCGMDHS--LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNY 174 (291)
Q Consensus 98 ~~~~~~~i~~~~~~~~~~~l~-~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (291)
..|...+.+++|+|+|++|+ +++.|+. |++||+.+++... + ..|...
T Consensus 219 -~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~-l----------------------------~~~~~~ 268 (415)
T 2hqs_A 219 -ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-V----------------------------TDGRSN 268 (415)
T ss_dssp -ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-C----------------------------CCCSSC
T ss_pred -ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEe-C----------------------------cCCCCc
Confidence 46788999999999999887 6666655 9999998876421 1 236677
Q ss_pred eeEEEEc--CCEEEEecC-CC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC--
Q psy10348 175 VDCVRWL--GDFVLSKSC-EN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS-- 247 (291)
Q Consensus 175 v~~~~~~--~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-- 247 (291)
+.+++|+ +++|++++. ++ .|.+||+.+++. ..+..+...+. .++++|+|++|++++.+
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-------------~~l~~~~~~~~--~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-------------QRITWEGSQNQ--DADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-------------EECCCSSSEEE--EEEECTTSSEEEEEEECSS
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-------------EEEecCCCccc--CeEECCCCCEEEEEECcCC
Confidence 8999998 677777765 45 677888877642 22333333333 45667889999988864
Q ss_pred -CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 248 -GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 248 -g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+.|++||+.+++. ..+. .+. .+.+++|+|||++|+
T Consensus 334 ~~~i~~~d~~~~~~-----~~l~--~~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 334 QQHIAKQDLATGGV-----QVLS--STF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp CEEEEEEETTTCCE-----EECC--CSS-SCEEEEECTTSSEEE
T ss_pred ceEEEEEECCCCCE-----EEec--CCC-CcCCeEEcCCCCEEE
Confidence 5899999998742 2222 332 789999999999886
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=3.9e-25 Score=170.85 Aligned_cols=230 Identities=12% Similarity=0.075 Sum_probs=163.3
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeee-ccceeEEEEecCCCcEEEEee--cCCeE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGH-GHAINELKFHPQDFNLLLSVS--KDHTL 81 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~--~dg~i 81 (291)
...|...+.+++|+|++ ++|++++ ++.|++||+.+ ++.......+ ...+.+++|+| ++++|++++ .++..
T Consensus 37 ~~~~~~~v~~~~~spdg----~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDG----KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-DGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEESSCCEEEEECTTS----SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-TSSEEEEEECTTTSSC
T ss_pred eccCCcceEeeEECCCC----CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-CCCEEEEEEeCCCCcc
Confidence 34578899999999999 4888876 78999999998 7776655555 36789999999 889999988 33445
Q ss_pred EEE--ECCCcceeeeeccccCCCCceEEEEEccCCCEEE-EEecCCcEEEEeccCch-hhhhhccccccCCCCccccccC
Q psy10348 82 RLW--NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPE-IKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 82 ~vw--d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
.|| ++.++. ...+ .+...+..++|+|++++|+ ++..|+.+++|+++... ....
T Consensus 111 ~l~~~~~~~~~-~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~------------------ 167 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLM----TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR------------------ 167 (297)
T ss_dssp EEEEEETTCCC-CEEC----CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE------------------
T ss_pred eEEEEECCCCc-eEEe----ecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE------------------
Confidence 555 545444 3333 2333589999999999877 77789999999975321 1111
Q ss_pred ccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM 234 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 234 (291)
...+...+.++.|+ +++++.++ .++.+++|++..... .+..+..+...+.. +.+
T Consensus 168 ----------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~--~~~ 224 (297)
T 2ojh_A 168 ----------LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-----------SVERITDSAYGDWF--PHP 224 (297)
T ss_dssp ----------CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----------CEEECCCCSEEEEE--EEE
T ss_pred ----------cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----------CcEEEecCCcccCC--eEE
Confidence 12266778999998 66666555 589999998763221 14445545444444 556
Q ss_pred cCCCcEEEEEcCC-----------CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 235 DYWQKILAVGNQS-----------GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 235 ~~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+|++++|++++.+ +.|++||+.+++. .......+|...+.+++|+|+|++|++
T Consensus 225 s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 225 SPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV----ETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp CTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC----EEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred CCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc----eeeeccCCCCcccccceECCCCCEEEE
Confidence 6889999988866 5699999988753 123333356678999999999998863
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=2.9e-24 Score=174.50 Aligned_cols=203 Identities=15% Similarity=0.106 Sum_probs=147.0
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----------ceeE-----EEeeeccceeEEEEecCCCcEEE-
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----------ACVR-----HFYGHGHAINELKFHPQDFNLLL- 73 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----------~~~~-----~~~~~~~~v~~~~~~~~~~~~l~- 73 (291)
...++.++++++. .++++++.++ +++|+.... ..+. ....+...|.+++|+| ++++|+
T Consensus 36 ~~~~n~lavs~~~----~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav 109 (434)
T 2oit_A 36 KERSSLLAVSNKY----GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSA 109 (434)
T ss_dssp CSCCBCEEEETTT----TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEE
T ss_pred CCCccEEEEecCC----CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEE
Confidence 4568899999987 4999998887 888875311 0111 1113567899999999 889999
Q ss_pred ---EeecCCeEEEEECCCc--------ceeeeeccccCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348 74 ---SVSKDHTLRLWNIKTD--------ICIAIFGGVEGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACA 141 (291)
Q Consensus 74 ---s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 141 (291)
+|+.|+.|++||+.++ +.+..+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++......
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~- 188 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT- 188 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-
Confidence 7889999999998765 222333334789999999999998 789999999999999999987532211
Q ss_pred cccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee
Q psy10348 142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR 219 (291)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (291)
..|...|.+++|+ |++|++|+.||.|++||.+ +.. ...
T Consensus 189 ---------------------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~------------~~~ 228 (434)
T 2oit_A 189 ---------------------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE------------KKV 228 (434)
T ss_dssp ---------------------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE------------EEE
T ss_pred ---------------------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc------------ccc
Confidence 2378889999998 8899999999999999998 322 222
Q ss_pred ecCC-----cccEEEEEEEecCCCcEEEEEc-CCC------cEEEEEcCCCC
Q psy10348 220 LNFK-----DCEIWFIRFSMDYWQKILAVGN-QSG------RTYVWDLDVQD 259 (291)
Q Consensus 220 ~~~~-----~~~i~~~~~~~~~~~~~l~~~~-~dg------~i~vwd~~~~~ 259 (291)
+..+ .....+.++++++++.++++.+ .|| .+++|++...+
T Consensus 229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 229 IPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp ECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 2211 1123455566666677775533 443 38999998753
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.6e-23 Score=172.44 Aligned_cols=247 Identities=8% Similarity=0.008 Sum_probs=171.9
Q ss_pred EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC--CCcceeee
Q psy10348 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI--KTDICIAI 94 (291)
Q Consensus 17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~ 94 (291)
+++|++ .++++++.|++|.+||..+++++..+..+.. +..++|+| ++++|++++.|+.|.+||+ .+++.+..
T Consensus 144 ~~~p~~----~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 144 DLDLPN----LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp CCCGGG----EEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred ccCCCC----EEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence 377776 5899999999999999999999999984333 88999999 9999999999999999999 78888877
Q ss_pred eccccCCCCceEEEEEcc----CCCEEEEEec-CCcEEEEeccCchhhhhhcc-----------------ccccCCCCcc
Q psy10348 95 FGGVEGHRDEVLSADFDL----LGTKIMSCGM-DHSLKLWDLTKPEIKDACAE-----------------SYTFNPARST 152 (291)
Q Consensus 95 ~~~~~~~~~~i~~~~~~~----~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~-----------------~~~~~~~~~~ 152 (291)
+ . +...+..++|+| +|+++++++. +++|.+||..+++.+..+.. .+.+++++..
T Consensus 218 i---~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 218 I---K-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp E---E-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred E---e-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 7 3 556789999999 9999999885 89999999999887766542 1122222211
Q ss_pred ccc-----------cCccccCcccccccccCcceeEEEEc--CCEEEE-ecCCCeEEEecCCCCCccccccCCCceeeee
Q psy10348 153 RPF-----------DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS-KSCENCIICWKPGRLEDKELRTNETNVTIIN 218 (291)
Q Consensus 153 ~~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 218 (291)
..+ +............ .+...+..+.|+ ++++++ +..+++|.+||..+++. +.
T Consensus 294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l------------~~ 360 (543)
T 1nir_A 294 FIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL------------SA 360 (543)
T ss_dssp EEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE------------EE
T ss_pred EEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE------------EE
Confidence 111 0000000000011 244557788898 666554 55689999999998754 44
Q ss_pred eecC----CcccEEEEEEEecCC-CcEEEEEc-CCCcEEEEEcCCCCC---CcceeEEEeccccccceeeeEEccCCcee
Q psy10348 219 RLNF----KDCEIWFIRFSMDYW-QKILAVGN-QSGRTYVWDLDVQDP---SSIKFQILSHPRCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 219 ~~~~----~~~~i~~~~~~~~~~-~~~l~~~~-~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 289 (291)
.+.. |.... ..+ .+|+ +.+++++. .|++|.+||+.+... ..+....+. .|.+.+..++|+|||++|
T Consensus 361 ~i~~g~~ph~g~g--~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~--~~g~~~~~v~~~pdg~~l 435 (543)
T 1nir_A 361 LVDVGKTPHPGRG--ANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ--GQGGGSLFIKTHPKSSHL 435 (543)
T ss_dssp EEECSSSBCCTTC--EEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE--CSCSCCCCEECCTTCCEE
T ss_pred eeccCCCCCCCCC--ccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE--cCCCCceEEEcCCCCCcE
Confidence 4442 22211 122 3465 66677775 689999999988221 113334444 555778899999999998
Q ss_pred eC
Q psy10348 290 LC 291 (291)
Q Consensus 290 ~s 291 (291)
.+
T Consensus 436 ~v 437 (543)
T 1nir_A 436 YV 437 (543)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=7.3e-23 Score=161.52 Aligned_cols=241 Identities=8% Similarity=0.022 Sum_probs=155.9
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCC-CeEEEEccC--Ccc--eeEEEeeeccceeEEEEecCCCcEEEEee-cCCe
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPA--FHA--CVRHFYGHGHAINELKFHPQDFNLLLSVS-KDHT 80 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~d-g~i~vw~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~ 80 (291)
+.+...+.+++|+|++ ++|++++.+ +.|.+|+++ +++ .+..+..+ ..+..++|+| ++++|++++ .++.
T Consensus 34 ~~~~~~~~~~~~spdg----~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~ 107 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDK----RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDH-QGQFVFVGSYNAGN 107 (343)
T ss_dssp EECSSCCCCEEECTTS----SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECT-TSSEEEEEETTTTE
T ss_pred EecCCCCceEEECCCC----CEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcC-CCCEEEEEecCCCe
Confidence 4566788899999998 477777776 999999997 554 33445443 3789999999 888776665 4889
Q ss_pred EEEEECC---CcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccC-chhhhhhccccccCCCCccccc
Q psy10348 81 LRLWNIK---TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTK-PEIKDACAESYTFNPARSTRPF 155 (291)
Q Consensus 81 i~vwd~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
|.+||+. ..+....+ .....+.+++|+|+++++++++ .++.|++||+.+ ++.........
T Consensus 108 i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----------- 172 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVV----EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEV----------- 172 (343)
T ss_dssp EEEEEEETTEEEEEEEEE----CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEE-----------
T ss_pred EEEEECCCCccccccccc----cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccc-----------
Confidence 9999994 33444444 2334688999999999888887 799999999987 44221100000
Q ss_pred cCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCC--CCccccccCCCceeeeeeecC-CcccEEE
Q psy10348 156 DTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGR--LEDKELRTNETNVTIINRLNF-KDCEIWF 229 (291)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 229 (291)
.......+..++|+ ++++ +++..++.|.+|++.. +.... ...+..+.. +......
T Consensus 173 ------------~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 173 ------------TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-------VQTLDMMPENFSDTRWA 233 (343)
T ss_dssp ------------ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-------EEEEECSCTTCCSCCCE
T ss_pred ------------ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-------EeeccccCccccccCCc
Confidence 00023356788898 5655 4555799999999954 22100 011111111 1112233
Q ss_pred EEEEecCCCcEEEE-EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 230 IRFSMDYWQKILAV-GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 230 ~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
..++++|++++|++ +..++.|.+||+............+. .+ ..+.+++|+|+|++|+
T Consensus 234 ~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~-~~~~~~~~s~dg~~l~ 292 (343)
T 1ri6_A 234 ADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP--TE-TQPRGFNVDHSGKYLI 292 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE--CS-SSCCCEEECTTSSEEE
T ss_pred cceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec--CC-CccceEEECCCCCEEE
Confidence 45667788988874 55799999999984221111122222 22 3488999999999775
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=1.2e-22 Score=161.09 Aligned_cols=228 Identities=9% Similarity=0.027 Sum_probs=167.1
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc---------eeEEEEecCCCcEEEEee--c
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA---------INELKFHPQDFNLLLSVS--K 77 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~s~~--~ 77 (291)
....+.+++|+|++. .++++...++.|.+||.++++.+..+..+... +.+++|+| +++++++++ .
T Consensus 87 ~~~~~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~ 162 (353)
T 3vgz_A 87 NDLKPFGATINNTTQ---TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGK 162 (353)
T ss_dssp ESSCCCSEEEETTTT---EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESS
T ss_pred cCCCcceEEECCCCC---EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCC
Confidence 345677899999884 35556666899999999999988888754422 68899999 777766665 4
Q ss_pred CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccC
Q psy10348 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDT 157 (291)
Q Consensus 78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
++.|.+||+.+++.+..+ ..+...+.+++|+|+++++++++.++.|.+||+.+++....+...
T Consensus 163 ~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-------------- 225 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAI---QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL-------------- 225 (353)
T ss_dssp SCEEEEEETTTTEEEEEE---CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC--------------
T ss_pred CceEEEEcCCCCceEEEe---cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC--------------
Confidence 789999999999888877 445666889999999999999999999999999988765443210
Q ss_pred ccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348 158 QKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM 234 (291)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 234 (291)
..++...+..++|+ ++++++++ .++.|.+||..+++. +..+..... ..+.+
T Consensus 226 ----------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~~~----~~~~~ 279 (353)
T 3vgz_A 226 ----------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI------------LAKVAAPES----LAVLF 279 (353)
T ss_dssp ----------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE------------EEEEECSSC----CCEEE
T ss_pred ----------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE------------EEEEEcCCC----ceEEE
Confidence 01244557788887 66555554 469999999988754 333333322 23555
Q ss_pred cCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 235 DYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 235 ~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+|+++++++++ .++.|.+||+.+++. ...+.. ...+.+++|+|||++|+
T Consensus 280 s~dg~~l~v~~~~~~~v~~~d~~~~~~----~~~~~~---~~~~~~~~~s~dg~~l~ 329 (353)
T 3vgz_A 280 NPARNEAYVTHRQAGKVSVIDAKSYKV----VKTFDT---PTHPNSLALSADGKTLY 329 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTEE----EEEEEC---CSEEEEEEECTTSCEEE
T ss_pred CCCCCEEEEEECCCCeEEEEECCCCeE----EEEEec---CCCCCeEEEcCCCCEEE
Confidence 67798665555 789999999988742 233332 24678999999999764
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=9.7e-24 Score=171.42 Aligned_cols=168 Identities=13% Similarity=0.120 Sum_probs=127.2
Q ss_pred eeecceeEEEEeeeccCCCCCEEE----EecCCCeEEEEccCCc--------ce---eEEEeeeccceeEEEEecCCCcE
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLA----VAGSRAVIRIFSPAFH--------AC---VRHFYGHGHAINELKFHPQDFNL 71 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~----~~~~dg~i~vw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~ 71 (291)
+.+...|++++|+|++ ++|| +|+.|+.|+|||+.++ +. +..+.+|...|.+++|+|.++.+
T Consensus 89 ~~~~~~v~~l~~spdg----~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 89 VPMKFPIHHLALSCDN----LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp ECCSSCEEEEEECTTS----CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred ccCCCcccEEEEcCCC----CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence 4456789999999998 4888 7899999999998765 22 34455799999999999954899
Q ss_pred EEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCc
Q psy10348 72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARS 151 (291)
Q Consensus 72 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 151 (291)
|++++.||+|++||++++...... .+|...|.+++|+|+|++|++|+.||.|++||++ ++....+......
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~---~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~----- 235 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCAT---LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY----- 235 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEE---ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC-----
T ss_pred EEEEECCCeEEEEEcCCCcceeec---cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc-----
Confidence 999999999999999988665544 5789999999999999999999999999999998 4333222110000
Q ss_pred cccccCccccCcccccccccCcceeEEEEcC-C-EEEE-ecCCC------eEEEecCCCCC
Q psy10348 152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG-D-FVLS-KSCEN------CIICWKPGRLE 203 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~l~~-~~~d~------~i~iwd~~~~~ 203 (291)
...|...|.++.|++ . ++++ ...|| .+++|+++...
T Consensus 236 ----------------~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 236 ----------------ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp ----------------CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ----------------CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 012456899999983 3 3322 33343 38999998653
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=7.4e-23 Score=177.64 Aligned_cols=242 Identities=11% Similarity=0.048 Sum_probs=163.1
Q ss_pred cceeEEEEeeeccCCCCCEEEEecC-CC-----eEEEEccCCcceeEEEeeecc------------------------ce
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGS-RA-----VIRIFSPAFHACVRHFYGHGH------------------------AI 59 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~-dg-----~i~vw~~~~~~~~~~~~~~~~------------------------~v 59 (291)
.+.+.+++||||+ ++|++++. |+ .|++||+.+++....+..+.. .+
T Consensus 36 ~~~~~~~~~SpdG----~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDG----SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTS----SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCC----CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 4578999999999 49999888 88 999999999987776665433 38
Q ss_pred eEEEEecCCCcEEEEeecCCeEEEEECCCcc--eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348 60 NELKFHPQDFNLLLSVSKDHTLRLWNIKTDI--CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137 (291)
Q Consensus 60 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 137 (291)
.+++|+| ++++|++++. +.|.+||+.++. ....+ ..+...+.+++|+|+|++|++++ ++.|++||+.+++..
T Consensus 112 ~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l---~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 112 VDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQL---THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp CCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBC---CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred ceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEc---ccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 8999999 9999999886 999999999872 33444 57788899999999999999887 568999999887644
Q ss_pred hhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC-----------------------
Q psy10348 138 DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN----------------------- 192 (291)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~----------------------- 192 (291)
...... . ...... .+.. ........+..+.|+ |++|++++.|+
T Consensus 186 ~~~~~~-----~--~~~~~g----~~~~-v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 186 QLTADG-----S--TTIGNG----IAEF-VADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp ECCCCC-----C--SSEEES----CCCH-HHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EeccCC-----c--cceecc----ccce-eeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 322100 0 000000 0000 000011225678888 67788777665
Q ss_pred ----------eEEEecCCC-CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-----CCcEEEEEcC
Q psy10348 193 ----------CIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-----SGRTYVWDLD 256 (291)
Q Consensus 193 ----------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-----dg~i~vwd~~ 256 (291)
.|.+||+.+ ++.. .+.....+...+..++ + |||++|++++. +..|++||+.
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~----------~~~~~~~~~~~~~~~~--~-pDg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQ----------WIDLGKEQDIYLARVN--W-RDPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCE----------EECCCSCSSEEEEEEE--E-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred CCCCCCCCeeEEEEEECCCCCceE----------EecCCCCcceEEEEEE--e-CCCCEEEEEEecccCCeEEEEEEECC
Confidence 788899877 6431 1111112444455544 4 55999987754 5789999999
Q ss_pred CCCCCcceeEEEecc--ccccceeeeEEccCCceee
Q psy10348 257 VQDPSSIKFQILSHP--RCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 257 ~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~ 290 (291)
+++. ...+... .....+.+++|+|||++++
T Consensus 321 ~g~~----~~~~~~~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 321 SNQQ----RVLAHETSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp TCCE----EEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred CCce----EEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence 8853 2222211 1111457899999999765
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.5e-22 Score=168.70 Aligned_cols=243 Identities=13% Similarity=0.048 Sum_probs=175.2
Q ss_pred eeeecceeEEEEeee----ccCCCCCEEEEec-CCCeEEEEccCCcceeEEEee----------ecc-ceeEEEEecCCC
Q psy10348 6 SLLIEENFYTCAWSM----DLESGRPLLAVAG-SRAVIRIFSPAFHACVRHFYG----------HGH-AINELKFHPQDF 69 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~----~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~ 69 (291)
.+.+......++|+| ++ +++++++ .+++|.+||..++++++.+.. |.+ .+.++.++|+++
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg----~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~ 292 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYED----RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 292 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTT----TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred EEecCCCcceEEeCCCcCCCC----CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCC
Confidence 344567789999999 88 5888887 489999999999999988864 223 688999999666
Q ss_pred cEEEEeecCCeEEEEECCCcceee--eeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhcccccc
Q psy10348 70 NLLLSVSKDHTLRLWNIKTDICIA--IFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 70 ~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
.++++...++.|.+||+.+++.+. .+ .+...+.++.|+|+|++|++++ .+++|.+||+.+++++..+... .
T Consensus 293 ~~~vs~~~~g~i~vvd~~~~~~l~~~~i----~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g--~ 366 (543)
T 1nir_A 293 EFIVNVKETGKVLLVNYKDIDNLTVTSI----GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG--K 366 (543)
T ss_dssp EEEEEETTTTEEEEEECTTSSSCEEEEE----ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS--S
T ss_pred EEEEEECCCCeEEEEEecCCCcceeEEe----ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC--C
Confidence 777888889999999998776544 33 4566788999999999877655 5899999999999876554310 0
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCC
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFK 223 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
..|......+... +..++++. .|++|.+||+.+.... ....+.++++..+
T Consensus 367 ----------------------~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~-----~~~~~~v~~l~~~ 419 (543)
T 1nir_A 367 ----------------------TPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP-----QYAWKKVAELQGQ 419 (543)
T ss_dssp ----------------------SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECS
T ss_pred ----------------------CCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCc-----hhcCeEEEEEEcC
Confidence 0143322233221 44666665 5899999999872110 0011557888887
Q ss_pred cccEEEEEEEecCCCcEEEEEc-------CCCcEEEEEcCCCCCCcceeEEEe------ccccccceeeeEEccCCceee
Q psy10348 224 DCEIWFIRFSMDYWQKILAVGN-------QSGRTYVWDLDVQDPSSIKFQILS------HPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 224 ~~~i~~~~~~~~~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~ 290 (291)
...+..++ ++|++++|++++ .+++|.|||+.+.+... ..+. ...+...+..++|+|||+.|.
T Consensus 420 g~~~~~v~--~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 420 GGGSLFIK--THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY---QVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp CSCCCCEE--CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCC---EEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred CCCceEEE--cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCe---EEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 76655544 567899999997 37799999999987542 2221 123457899999999999886
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=3.2e-22 Score=157.27 Aligned_cols=223 Identities=8% Similarity=-0.016 Sum_probs=152.6
Q ss_pred EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CCeEEEEECCCcce-eee
Q psy10348 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DHTLRLWNIKTDIC-IAI 94 (291)
Q Consensus 17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~-~~~ 94 (291)
.|.++.+ ..+++++.++.|++||+++++.+..+..+...+ .++|+| +++++++++. ++.|.+||+.+++. ...
T Consensus 4 ~~~~~~~---~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 4 MFQTTSN---FGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp ---CCCC---EEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred eEcCCCC---EEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 3444443 468888899999999999999988887666677 999999 7776665554 88999999998887 555
Q ss_pred eccccCCCCceEEEEEccCCCEEEEEecCC---cEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc
Q psy10348 95 FGGVEGHRDEVLSADFDLLGTKIMSCGMDH---SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH 171 (291)
Q Consensus 95 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (291)
+ ..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+. .
T Consensus 79 ~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-----------------------------~ 126 (331)
T 3u4y_A 79 I---QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-----------------------------I 126 (331)
T ss_dssp E---EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-----------------------------C
T ss_pred c---ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-----------------------------C
Confidence 5 45555555599999999999655553 89999999887654432 2
Q ss_pred CcceeEEEEc--CCEE-EEecCCCe-EEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cC
Q psy10348 172 RNYVDCVRWL--GDFV-LSKSCENC-IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQ 246 (291)
Q Consensus 172 ~~~v~~~~~~--~~~l-~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~ 246 (291)
.....+++|+ ++++ ++...++. |.+|++........ .....+. ..... ..+.++|+|++++++ ..
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~-------~~~~~~~-~~~~~--~~~~~spdg~~l~v~~~~ 196 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD-------TGQEFIS-GGTRP--FNITFTPDGNFAFVANLI 196 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE-------EEEEEEC-SSSSE--EEEEECTTSSEEEEEETT
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee-------cCCcccc-CCCCc--cceEECCCCCEEEEEeCC
Confidence 3345788998 5544 44455678 99999875432100 0011111 22223 345667889866554 57
Q ss_pred CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
++.|++||+.+++... ....+. ....+..++|+|||++|+
T Consensus 197 ~~~v~v~d~~~~~~~~-~~~~~~---~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 197 GNSIGILETQNPENIT-LLNAVG---TNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp TTEEEEEECSSTTSCE-EEEEEE---CSSCCCCEEECTTSSEEE
T ss_pred CCeEEEEECCCCcccc-eeeecc---CCCCCceEEECCCCCEEE
Confidence 8999999999876411 122232 235778999999999764
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=5.3e-21 Score=151.54 Aligned_cols=226 Identities=11% Similarity=0.036 Sum_probs=163.8
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecC-------CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCc-EEEEeec
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGS-------RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN-LLLSVSK 77 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~ 77 (291)
.......+..++|+|++. ++++++. ++.|.+||..+++.+..+.. ...+..++|+| +++ ++++...
T Consensus 36 ~~~~~~~~~~~~~s~dg~----~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~ 109 (353)
T 3vgz_A 36 RKAVGKGAYEMAYSQQEN----ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINN-TTQTLWFGNTV 109 (353)
T ss_dssp EEEEESSEEEEEEETTTT----EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEET-TTTEEEEEETT
T ss_pred hhhhccCccceEECCCCC----EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECC-CCCEEEEEecC
Confidence 445567888999999984 6776653 57899999999998888874 45578999999 777 4555566
Q ss_pred CCeEEEEECCCcceeeeeccccCCCC---------ceEEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhcccccc
Q psy10348 78 DHTLRLWNIKTDICIAIFGGVEGHRD---------EVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 78 dg~i~vwd~~~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
++.|.+||..+++.+..+. .+.. .+.+++|+|+++++++++ .++.|.+||+.+++....+.
T Consensus 110 ~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~----- 181 (353)
T 3vgz_A 110 NSAVTAIDAKTGEVKGRLV---LDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ----- 181 (353)
T ss_dssp TTEEEEEETTTCCEEEEEE---SCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-----
T ss_pred CCEEEEEeCCCCeeEEEEe---cCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-----
Confidence 7999999999998877763 2221 278999999999887776 47889999999887654432
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-- 222 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (291)
.+...+..++|+ ++++++++.++.|.+||+.+.+. +..+..
T Consensus 182 -----------------------~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~------------~~~~~~~~ 226 (353)
T 3vgz_A 182 -----------------------NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI------------LSRKKLLD 226 (353)
T ss_dssp -----------------------CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE------------EEEEECCC
T ss_pred -----------------------CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE------------EEEEEcCC
Confidence 123335677786 77888888999999999988744 333332
Q ss_pred --CcccEEEEEEEecCCCcEEEEEcC-CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 223 --KDCEIWFIRFSMDYWQKILAVGNQ-SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 223 --~~~~i~~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+...+.. ++++|+++++++++. ++.|.+||+.+++.. ..+.. + ....++|+|+|++|+
T Consensus 227 ~~~~~~~~~--~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~-~---~~~~~~~s~dg~~l~ 287 (353)
T 3vgz_A 227 DGKEHFFIN--ISLDTARQRAFITDSKAAEVLVVDTRNGNIL----AKVAA-P---ESLAVLFNPARNEAY 287 (353)
T ss_dssp SSSCCCEEE--EEEETTTTEEEEEESSSSEEEEEETTTCCEE----EEEEC-S---SCCCEEEETTTTEEE
T ss_pred CCCCcccce--EEECCCCCEEEEEeCCCCEEEEEECCCCcEE----EEEEc-C---CCceEEECCCCCEEE
Confidence 2233333 455577997777664 599999999887532 23332 1 236799999999654
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.6e-21 Score=154.28 Aligned_cols=239 Identities=10% Similarity=-0.004 Sum_probs=152.7
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecC--CCeEEEEccCCcc--eeEEEeeeccceeEEEEecCCCcEEEEee-cCCeEE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGS--RAVIRIFSPAFHA--CVRHFYGHGHAINELKFHPQDFNLLLSVS-KDHTLR 82 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~--dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~ 82 (291)
.+......++|+|++ ++++++.. ++.|++|++.+++ .+..+..+...+..++|+| ++++|++++ .++.|.
T Consensus 37 ~~~~~p~~~a~spdg----~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 37 AATQNPTYLALSAKD----CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAE 111 (347)
T ss_dssp EECSCCCCEEECTTC----EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEE
T ss_pred eccCCcceEEEccCC----eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEE
Confidence 345667789999988 44444432 6899999997665 4445556778899999999 888888877 679999
Q ss_pred EEECCC-cc--eeeeeccccC-------CCCceEEEEEccCCCEEEEEecCCcEEEEecc-CchhhhhhccccccCCCCc
Q psy10348 83 LWNIKT-DI--CIAIFGGVEG-------HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-KPEIKDACAESYTFNPARS 151 (291)
Q Consensus 83 vwd~~~-~~--~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~ 151 (291)
+|++.. +. .+..+.. .+ ....+.+++|+|+|+++++...++.|++||+. +++...... ..
T Consensus 112 v~~~~~~g~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~--~~------ 182 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQH-SGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSV--LT------ 182 (347)
T ss_dssp EEEECTTSCEEEEEEEEC-CCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEE--EE------
T ss_pred EEEeCCCCCeeecceeec-CCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeee--EE------
Confidence 999963 22 2222210 11 22358899999999966666668899999998 333211000 00
Q ss_pred cccccCccccCcccccccccCcceeEEEEc--CCEEE-EecCCCeEEEecCCC--CCccccccCCCceeeeeeecCCcc-
Q psy10348 152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVL-SKSCENCIICWKPGR--LEDKELRTNETNVTIINRLNFKDC- 225 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 225 (291)
.........++|+ |++++ ++..++.|.+|++.. ++. ..+..+.....
T Consensus 183 -----------------~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~----------~~~~~~~~~~~~ 235 (347)
T 3hfq_A 183 -----------------MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF----------TQLGIVKTIPAD 235 (347)
T ss_dssp -----------------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE----------EEEEEEESSCTT
T ss_pred -----------------cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce----------EEeeeeeecCCC
Confidence 0012245678898 66454 466789999999874 221 11222222111
Q ss_pred ---cEEEEEEEecCCCcEEEE-EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 226 ---EIWFIRFSMDYWQKILAV-GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 226 ---~i~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
......++++|||++|++ ...++.|.+|++..... .........+...+.+++|+|||++|+
T Consensus 236 ~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~---~~~~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 236 YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH---LTLIQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC---EEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc---EEEeEEEecCCCCcCeEEECCCCCEEE
Confidence 123445667788998854 55689999999974321 112222223445688999999999876
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.9e-23 Score=180.87 Aligned_cols=245 Identities=9% Similarity=-0.002 Sum_probs=158.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc---ceeEEEEecCCCcEEEEeecC---------
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH---AINELKFHPQDFNLLLSVSKD--------- 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d--------- 78 (291)
....+++|+|++ +++++ +.||.|++||+.+++....+..|.. .|.+++|+| ++++|++++.+
T Consensus 17 ~~~~~~~~spdg----~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 17 IHDPEAKWISDT----EFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCCBSSSS----CBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCC
T ss_pred ccccccEEcCCC----cEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecce
Confidence 346788999998 46666 7899999999999988877776654 499999999 99999998764
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
+.+.+||+.+++. ..+.....|...+..++|+|+|+.|++++. +.|++||+.+++......... .. ..+.
T Consensus 91 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-----~~-~~~~-- 160 (723)
T 1xfd_A 91 GYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-----EG-VIYN-- 160 (723)
T ss_dssp SEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB-----TT-TEEE--
T ss_pred eeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC-----CC-ceEC--
Confidence 7888999998876 334222455666889999999999999885 799999998876543221100 00 0000
Q ss_pred cccCcccccccccCcceeEEEEc--CCEEEEecCC----------------------------------CeEEEecCCCC
Q psy10348 159 KEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE----------------------------------NCIICWKPGRL 202 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d----------------------------------~~i~iwd~~~~ 202 (291)
+....+. .+.-...+.+++|+ |++|++++.| ..|.+||+.++
T Consensus 161 -g~~~~v~-~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 161 -GLSDWLY-EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp -EECCHHH-HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred -cccceeE-EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 0000000 00000123567776 5566666543 27888988776
Q ss_pred CccccccCCCceeeeeeecCCc----ccEEEEEEEecCCCcEEEEEcC----CCcEEEEEcCCCCCCcceeEEEeccccc
Q psy10348 203 EDKELRTNETNVTIINRLNFKD----CEIWFIRFSMDYWQKILAVGNQ----SGRTYVWDLDVQDPSSIKFQILSHPRCM 274 (291)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 274 (291)
+. ...+..+. ..-....++++|||++|++... +..|++||+.+++.. ..+.. .+.
T Consensus 239 ~~------------~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~-~~~ 301 (723)
T 1xfd_A 239 TH------------DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT----KKHED-ESE 301 (723)
T ss_dssp CC------------CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE----EEEEE-ECS
T ss_pred ce------------eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce----EEEEe-ccC
Confidence 43 12222210 1223345667788999877653 367999999987531 22221 222
Q ss_pred cce----eeeEEccCCceee
Q psy10348 275 SAV----RQTTLSKNGNVLL 290 (291)
Q Consensus 275 ~~v----~~~~~s~~g~~l~ 290 (291)
+.+ ..++|||||+.|+
T Consensus 302 ~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 302 AWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp SCCCCCCCCCEECTTSCSEE
T ss_pred CEEeccCCCceEcCCCCeEE
Confidence 333 3789999999775
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.6e-21 Score=153.29 Aligned_cols=233 Identities=11% Similarity=0.094 Sum_probs=155.7
Q ss_pred cceeEEEEeeeccCCCCCEEEEe-cCCCeEEEEccCCcce-eEEEeeeccceeEEEEecCCCcEEEEeecCC---eEEEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVA-GSRAVIRIFSPAFHAC-VRHFYGHGHAINELKFHPQDFNLLLSVSKDH---TLRLW 84 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vw 84 (291)
.... +++|+|++. +++++ ..++.|.+||+.+++. ...+..+..+..+++|+| ++++++++..++ .|.+|
T Consensus 40 ~~~~-~~~~s~dg~----~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 40 YDFV-DTAITSDCS----NVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp CCEE-EEEECSSSC----EEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEE
T ss_pred CCcc-eEEEcCCCC----EEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEE
Confidence 4455 999999984 55555 4589999999999987 777777766666699999 888888665553 89999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCc-EEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHS-LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
|+.+++.+..+ .......+++|+|+|++++++ ..++. +.+|++.....+.....
T Consensus 114 d~~~~~~~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~-------------------- 169 (331)
T 3u4y_A 114 SFLKNKFISTI----PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQ-------------------- 169 (331)
T ss_dssp ETTTTEEEEEE----ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEE--------------------
T ss_pred ECCCCCeEEEE----ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCC--------------------
Confidence 99999888776 234556899999999866655 44588 99999875432211100
Q ss_pred cccccccccCcceeEEEEc--CCE-EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 163 PQFSTRDIHRNYVDCVRWL--GDF-VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~--~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
.. .........++|+ +++ ++++..++.|.+||+.+++.. ..+..+.... .+. .++++|+|+
T Consensus 170 ---~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~---------~~~~~~~~~~-~~~--~~~~spdg~ 233 (331)
T 3u4y_A 170 ---EF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI---------TLLNAVGTNN-LPG--TIVVSRDGS 233 (331)
T ss_dssp ---EE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC---------EEEEEEECSS-CCC--CEEECTTSS
T ss_pred ---cc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc---------ceeeeccCCC-CCc--eEEECCCCC
Confidence 00 0123346788898 664 455567899999999876541 1133333322 222 355678899
Q ss_pred EEEEEc-CCCcEEEEEcCCCCCCcceeEEEec-----cccccceeeeEEccCCceee
Q psy10348 240 ILAVGN-QSGRTYVWDLDVQDPSSIKFQILSH-----PRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 240 ~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~ 290 (291)
+|++++ .++.|.+||+.+++.. ....+.. .........++|+|||++|+
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 288 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSGTLS--FVKSFGHGLLIDPRPLFGANQMALNKTETKLF 288 (331)
T ss_dssp EEEEECSSEEEEEEEETTTTEEE--EEEEEECCCCCCCGGGTTCCCEEECTTSSEEE
T ss_pred EEEEEEcCCCEEEEEECCCCcee--eecccccccccCCCCcccccceEECCCCCEEE
Confidence 776665 5788999999987431 0111111 11112235689999999875
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=8.8e-22 Score=151.94 Aligned_cols=206 Identities=11% Similarity=0.009 Sum_probs=146.2
Q ss_pred EecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC-cceeeeeccccCC-CCceEEE
Q psy10348 31 VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-DICIAIFGGVEGH-RDEVLSA 108 (291)
Q Consensus 31 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~-~~~i~~~ 108 (291)
.++.++.|++||+.+++.. .+..|...|.+++|+| ++++|++++ ++.|.+||+.+ ++..... ..+ ...+.++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~ 90 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVD---TGFATICNNDH 90 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECC---CTTCCCBCSCC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEec---cccccccccce
Confidence 3467899999999988765 4556899999999999 889999876 78999999998 7766555 344 4778999
Q ss_pred EEccCCCEEEEEe--cCCcEEEEecc--CchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348 109 DFDLLGTKIMSCG--MDHSLKLWDLT--KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G 182 (291)
Q Consensus 109 ~~~~~~~~l~~~~--~d~~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 182 (291)
+|+|++++|++++ .++...+|.++ +++. ..+. +...+..++|+ +
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~-----------------------------~~~~~~~~~~spdg 140 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT-----------------------------KNLPSYWHGWSPDG 140 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC-----------------------------SSSSEEEEEECTTS
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee-----------------------------cCCCccceEECCCC
Confidence 9999999999998 44566666654 3321 1111 22237788898 6
Q ss_pred CEEE-EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCCC
Q psy10348 183 DFVL-SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQDP 260 (291)
Q Consensus 183 ~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 260 (291)
++|+ ++..++.+++|++...... ...+..+...+.. +.++|++++|+.++ .++.+++|++.....
T Consensus 141 ~~l~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~ 207 (297)
T 2ojh_A 141 KSFTYCGIRDQVFDIYSMDIDSGV-----------ETRLTHGEGRNDG--PDYSPDGRWIYFNSSRTGQMQIWRVRVDGS 207 (297)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCC-----------EEECCCSSSCEEE--EEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred CEEEEEECCCCceEEEEEECCCCc-----------ceEcccCCCcccc--ceECCCCCEEEEEecCCCCccEEEECCCCC
Confidence 6665 7788999999986432211 3344444555554 45567799887766 589999999873221
Q ss_pred CcceeEEEeccccccceeeeEEccCCceee
Q psy10348 261 SSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.......+...+.+++|+|+|++|+
T Consensus 208 -----~~~~~~~~~~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 208 -----SVERITDSAYGDWFPHPSPSGDKVV 232 (297)
T ss_dssp -----CEEECCCCSEEEEEEEECTTSSEEE
T ss_pred -----CcEEEecCCcccCCeEECCCCCEEE
Confidence 1122234567899999999999886
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=5.4e-21 Score=150.42 Aligned_cols=221 Identities=10% Similarity=0.085 Sum_probs=148.9
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeecc--ceeEEEEecCCCcE-EEEeecCCeEEEEECCCcceeeeeccccCC--
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGH--AINELKFHPQDFNL-LLSVSKDHTLRLWNIKTDICIAIFGGVEGH-- 101 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-- 101 (291)
.++++++.++.|++||+.+++.+..+..... .+..++|+| +++. ++++..++.|.+||+.+++.+..+. ..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRID--LSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEE--CCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEE--cCCcc
Confidence 4899999999999999999998887763322 588999999 7755 4566668899999999988877662 122
Q ss_pred --CCceEEEEEccCCCEEEEEe------------cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 102 --RDEVLSADFDLLGTKIMSCG------------MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 102 --~~~i~~~~~~~~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
...+.+++|+|+|++++++. .++.|.+||+.+++....+.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-------------------------- 132 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-------------------------- 132 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--------------------------
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe--------------------------
Confidence 22677899999999988886 57999999998877554332
Q ss_pred ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC---c------ee---------------------
Q psy10348 168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET---N------VT--------------------- 215 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~------~~--------------------- 215 (291)
....+.+++|+ +++++++ ++.|.+||+.+++......... . ..
T Consensus 133 ---~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 207 (337)
T 1pby_B 133 ---APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp ---CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred ---CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence 12235566776 5566666 5778888887654331110000 0 00
Q ss_pred ------------eeeeecCCcccE----------EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc
Q psy10348 216 ------------IINRLNFKDCEI----------WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC 273 (291)
Q Consensus 216 ------------~~~~~~~~~~~i----------~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 273 (291)
.+..+......+ ....++++|++++++++ ++.|++||+.+++. ...+..
T Consensus 208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~----~~~~~~--- 278 (337)
T 1pby_B 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS----IKRVPL--- 278 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE----EEEEEC---
T ss_pred ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC----cceecC---
Confidence 011111111110 12235677889999988 78999999988742 223322
Q ss_pred ccceeeeEEccCCceee
Q psy10348 274 MSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 274 ~~~v~~~~~s~~g~~l~ 290 (291)
...+.+++|+|||++|+
T Consensus 279 ~~~~~~~~~s~dg~~l~ 295 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVW 295 (337)
T ss_dssp SSCCCEEEECTTSCEEE
T ss_pred CCceeeEEECCCCCEEE
Confidence 24678999999999875
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=1.6e-20 Score=147.67 Aligned_cols=222 Identities=9% Similarity=0.022 Sum_probs=155.8
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEee----------
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVS---------- 76 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~---------- 76 (291)
.+.+++|+|++. .+++++..++.|.+||+.+++.+..+.. |...+..++|+| +++++++++
T Consensus 35 ~~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGR---IAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSS---EEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCC---EEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC-CCCEEEEEecccccccccc
Confidence 578999999984 3456667789999999999988877763 223678999999 888888876
Q ss_pred --cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc-----ccccCCC
Q psy10348 77 --KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE-----SYTFNPA 149 (291)
Q Consensus 77 --~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~~ 149 (291)
.++.|.+||+.+++.+..+ . ....+.+++|+|++++|+++ ++.|.+||+.+++....+.. ...+.|+
T Consensus 111 ~~~~~~i~v~d~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d 184 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRRKAF---E-APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184 (337)
T ss_dssp EECCCEEEEEETTTTEEEEEE---E-CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred cccCceEEEEECCCCcEEEEE---e-CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence 5799999999988877776 2 24567889999999988888 68999999998876544332 2244444
Q ss_pred CccccccCccccC------------------------cc---------cccccccCcceeEEEEc--CCEEEEecCCCeE
Q psy10348 150 RSTRPFDTQKEHF------------------------PQ---------FSTRDIHRNYVDCVRWL--GDFVLSKSCENCI 194 (291)
Q Consensus 150 ~~~~~~~~~~~~~------------------------~~---------~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i 194 (291)
+............ .. ......+...+.+++|+ +++++++ ++.|
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v 262 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL 262 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence 4332221110000 00 00112234456678898 6677777 7999
Q ss_pred EEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348 195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
.+||+.+++. +..+.... .+. .++++|++++|++++.++.|++||+.+++.
T Consensus 263 ~~~d~~~~~~------------~~~~~~~~-~~~--~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 263 ESFDLEKNAS------------IKRVPLPH-SYY--SVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EEEETTTTEE------------EEEEECSS-CCC--EEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred EEEECCCCcC------------cceecCCC-cee--eEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 9999987643 34443332 233 356678899999999999999999998853
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=1.3e-21 Score=168.94 Aligned_cols=226 Identities=8% Similarity=0.062 Sum_probs=157.6
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC--
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT-- 88 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-- 88 (291)
..|.+++|||+ . .++.+ .++.|++||+.+++... +..+...+..++|+| +++.|+.+ .|+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~----~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-G----LVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-T----EEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTT
T ss_pred cCceeEEECCC-C----eEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCccc
Confidence 56999999999 4 45444 35999999999887544 445677899999999 89999885 689999999998
Q ss_pred ---cceeeeeccccCCCCc--------------eEEEEEccCCCEEEEEe------------------------------
Q psy10348 89 ---DICIAIFGGVEGHRDE--------------VLSADFDLLGTKIMSCG------------------------------ 121 (291)
Q Consensus 89 ---~~~~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~------------------------------ 121 (291)
++..... ..+... +.++.|+|+|++|++++
T Consensus 153 ~~~g~~~~~~---~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 153 EGMSRAIAVT---IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp SCCCCCEESC---SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred ccCCCcEEec---cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 7765544 233332 48899999999999987
Q ss_pred ---cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC----
Q psy10348 122 ---MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN---- 192 (291)
Q Consensus 122 ---~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~---- 192 (291)
.+..|++||+.+++...... ...|...+.+++|+ |++|++++.++
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~--------------------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 283 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQT--------------------------GEPKEKFLTNLSWSPDENILYVAEVNRAQNE 283 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCC--------------------------CSCTTCEEEEEEECTTSSEEEEEEECTTSCE
T ss_pred CCCCeeEEEEEECCCCceEeecc--------------------------CCCCceeEeeEEEECCCCEEEEEEeCCCCCe
Confidence 34678889988766322110 01366779999998 77888877665
Q ss_pred -eEEEecCCCCCccccccCCCceeeeeeecCCcccE-EEEEEEecC--CCcEEEEEcCCCcEEEEEcC-CCCCCcceeEE
Q psy10348 193 -CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI-WFIRFSMDY--WQKILAVGNQSGRTYVWDLD-VQDPSSIKFQI 267 (291)
Q Consensus 193 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~ 267 (291)
.|.+||+.+++.. ..+.... +...+ ....+.++| ||+++++++.||.+++|.+. ++. ....
T Consensus 284 ~~v~~~d~~~g~~~---------~~~~~~~-~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~----~~~~ 349 (706)
T 2z3z_A 284 CKVNAYDAETGRFV---------RTLFVET-DKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR----LIRQ 349 (706)
T ss_dssp EEEEEEETTTCCEE---------EEEEEEE-CSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC----EEEE
T ss_pred eEEEEEECCCCcee---------eEEEEcc-CCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC----EEEe
Confidence 9999999887321 1111111 11100 001235567 89999999999999999887 332 1222
Q ss_pred Eeccccccceee-eEEccCCceee
Q psy10348 268 LSHPRCMSAVRQ-TTLSKNGNVLL 290 (291)
Q Consensus 268 ~~~~~~~~~v~~-~~~s~~g~~l~ 290 (291)
+ ..+...+.+ ++|+|||+.|+
T Consensus 350 l--~~~~~~v~~~~~~spdg~~l~ 371 (706)
T 2z3z_A 350 V--TKGEWEVTNFAGFDPKGTRLY 371 (706)
T ss_dssp C--CCSSSCEEEEEEECTTSSEEE
T ss_pred c--CCCCeEEEeeeEEcCCCCEEE
Confidence 2 345566776 79999998875
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=2.2e-20 Score=147.35 Aligned_cols=216 Identities=9% Similarity=0.033 Sum_probs=141.1
Q ss_pred EEEEecCCCeEEEEccC-Cc--ceeEEEeeeccceeEEEEecCCCcEEEEeecC-CeEEEEECC--Ccce--eeeecccc
Q psy10348 28 LLAVAGSRAVIRIFSPA-FH--ACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-HTLRLWNIK--TDIC--IAIFGGVE 99 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~--~~~~--~~~~~~~~ 99 (291)
++++++.++.|++|+++ ++ +.+..+ .+...+.+++|+| ++++|++++.+ +.|.+|++. +++. +..+ .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~ 81 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES---A 81 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE---E
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeecccc---c
Confidence 45555889999999985 33 233333 4677899999999 88888888876 999999997 4443 2333 3
Q ss_pred CCCCceEEEEEccCCCEEEEEec-CCcEEEEeccC---chhhhhhccccccCCCCccccccCccccCcccccccccCcce
Q psy10348 100 GHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLTK---PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV 175 (291)
Q Consensus 100 ~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 175 (291)
.+ ..+..++|+|++++|++++. ++.|.+||+.. .+....+. ....+
T Consensus 82 ~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------------------------~~~~~ 131 (343)
T 1ri6_A 82 LP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-----------------------------GLDGC 131 (343)
T ss_dssp CS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-----------------------------CCTTB
T ss_pred cC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-----------------------------CCCCc
Confidence 33 37889999999998877665 88999999952 22221111 22347
Q ss_pred eEEEEc--CCEEEEec-CCCeEEEecCCC-CCccccccCCCceeeee--eecCC-cccEEEEEEEecCCCcEEEEE-cCC
Q psy10348 176 DCVRWL--GDFVLSKS-CENCIICWKPGR-LEDKELRTNETNVTIIN--RLNFK-DCEIWFIRFSMDYWQKILAVG-NQS 247 (291)
Q Consensus 176 ~~~~~~--~~~l~~~~-~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~--~~~~~-~~~i~~~~~~~~~~~~~l~~~-~~d 247 (291)
.+++|+ ++++++++ .++.|.+||+.. ++. ..+. ....+ ...+. .++++|++++++++ ..+
T Consensus 132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~----------~~~~~~~~~~~~~~~~~--~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHL----------VAQDPAEVTTVEGAGPR--HMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE----------EEEEEEEEECSTTCCEE--EEEECTTSSEEEEEETTT
T ss_pred eEEEECCCCCEEEEecCCCCEEEEEEecCCCce----------eeecccccccCCCCCcc--eEEECCCCCEEEEEeCCC
Confidence 788888 66677666 899999999976 322 1111 22221 22333 35667889977655 488
Q ss_pred CcEEEEEcCCCCCCcceeEEEe-cc-c--cccceeeeEEccCCceee
Q psy10348 248 GRTYVWDLDVQDPSSIKFQILS-HP-R--CMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 248 g~i~vwd~~~~~~~~~~~~~~~-~~-~--~~~~v~~~~~s~~g~~l~ 290 (291)
+.|.+|++.............. .. + ....+.+++|+|+|++|+
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 9999999964221111112222 11 1 123566899999998875
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=8.2e-21 Score=150.18 Aligned_cols=230 Identities=10% Similarity=-0.035 Sum_probs=152.8
Q ss_pred EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEE-EEeecCCeEEEEECCCcceee
Q psy10348 16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLL-LSVSKDHTLRLWNIKTDICIA 93 (291)
Q Consensus 16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~ 93 (291)
+++++++ .++++++.++.|++||+.+++.+..+..+. ..+..++|+| +++++ +++..++.|.+||+.+++...
T Consensus 5 ~~~~~~~----~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 5 PALKAGH----EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCTTC----EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCC----EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 3455555 589999999999999999999888887543 2578999999 77654 555678999999999988776
Q ss_pred eeccccCC-----CCceEEEEEccCCCEEEEEecC------------CcEEEEeccCchhhhhhccccccCCCCcccccc
Q psy10348 94 IFGGVEGH-----RDEVLSADFDLLGTKIMSCGMD------------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFD 156 (291)
Q Consensus 94 ~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
.+. ..+ ...+..++|+|+|++|++++.+ +.|.+||+.+++.......
T Consensus 80 ~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------------- 143 (349)
T 1jmx_B 80 HAN--LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-------------- 143 (349)
T ss_dssp EEE--SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--------------
T ss_pred EEE--cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee--------------
Confidence 662 122 2347889999999999998865 8999999988654322110
Q ss_pred CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC---c-----------------e
Q psy10348 157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET---N-----------------V 214 (291)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~-----------------~ 214 (291)
..+...+.+++|+ ++ +++++. .|.+||+.+++......... . .
T Consensus 144 ------------~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (349)
T 1jmx_B 144 ------------FPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH 208 (349)
T ss_dssp ------------EECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred ------------ccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcce
Confidence 0123357788887 55 555443 49999998776432111110 0 0
Q ss_pred ---e--eeee-------------------ecCCcccE----------EEEEEEecC-CCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 215 ---T--IINR-------------------LNFKDCEI----------WFIRFSMDY-WQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 215 ---~--~~~~-------------------~~~~~~~i----------~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
. .+.. +......+ ....++++| ++++++++ ++.|.+||+.+++
T Consensus 209 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~ 286 (349)
T 1jmx_B 209 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK 286 (349)
T ss_dssp EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE
T ss_pred eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe
Confidence 0 0000 00000000 122345668 89999988 8899999999874
Q ss_pred CCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 260 PSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 260 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
. ...+.. ...+.+++|+|||++|+
T Consensus 287 ~----~~~~~~---~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 287 L----IKAANL---DHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp E----EEEEEC---SSCCCEEEECSSSSCEE
T ss_pred E----EEEEcC---CCCccceEECCCCCEEE
Confidence 2 233322 23578999999998876
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=1e-20 Score=169.76 Aligned_cols=217 Identities=12% Similarity=0.078 Sum_probs=165.2
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----------eccceeEEEEe-cCCCcEEEEeecC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----------HGHAINELKFH-PQDFNLLLSVSKD 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~~l~s~~~d 78 (291)
..+...+|+|++. .|+.+ .++.|++|++...+ +..+.. |...+..++|+ | +++.|++++ +
T Consensus 245 ~~~~~~~~SpDG~----~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~ 316 (1045)
T 1k32_A 245 TDYYPRHLNTDGR----RILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-R 316 (1045)
T ss_dssp CSSCEEEEEESSS----CEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-T
T ss_pred CCcceeeEcCCCC----EEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-c
Confidence 3466789999984 77776 58999999985443 334443 45579999999 9 899998887 7
Q ss_pred CeEEEEECCCcceeeeeccccCCCC-ceEEEEEccCCCEEEEEecCCcEE-EEeccCchhhhhhccccccCCCCcccccc
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRD-EVLSADFDLLGTKIMSCGMDHSLK-LWDLTKPEIKDACAESYTFNPARSTRPFD 156 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~~i~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
+.|.+|++..+.... + ..|.. .+..++|+ +|+.|++++.++.+. +||+.+++....
T Consensus 317 ~~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l----------------- 374 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLK-V---PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF----------------- 374 (1045)
T ss_dssp TEEEEECTTSSBEEE-C---SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-----------------
T ss_pred CEEEEEcCCCCceEE-c---cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe-----------------
Confidence 899999998776544 3 46777 89999999 999999998888888 889876643211
Q ss_pred CccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEe
Q psy10348 157 TQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSM 234 (291)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 234 (291)
..|...+..++|+ |++|++++.++.|++||+.+++. ......+...+.. +++
T Consensus 375 ------------~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~------------~~~~~~~~~~v~~--~~~ 428 (1045)
T 1k32_A 375 ------------EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP------------TVIERSREAMITD--FTI 428 (1045)
T ss_dssp ------------CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE------------EEEEECSSSCCCC--EEE
T ss_pred ------------cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce------------EEeccCCCCCccc--eEE
Confidence 1266778999998 78999999999999999988754 3333345555544 455
Q ss_pred cCCCcEEEEEcCCC----------cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 235 DYWQKILAVGNQSG----------RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 235 ~~~~~~l~~~~~dg----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+|||++|++++.++ .|++||+.+++ ......|...+.+++|+|||++|+
T Consensus 429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-------~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-------IFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-------EEECSCSSSBEEEEEECTTSCEEE
T ss_pred CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-------EEEeeCCCcccCCceEcCCCCEEE
Confidence 67899999887654 89999998863 223335667788999999999886
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=1.1e-20 Score=159.57 Aligned_cols=217 Identities=10% Similarity=0.012 Sum_probs=149.7
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecC-CCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeec---CCeEEE
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSK---DHTLRL 83 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~---dg~i~v 83 (291)
+..+|++++|+||+ +.||.++. ||+++||++++++.. .+..|. ..+..++|+| + +++++++. +....+
T Consensus 20 ~~~~~~~~~~~~DG----~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDG----DKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETT----TEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCC----CeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCC-C-eEEEEeccCCCCcceEE
Confidence 35689999999999 48888876 999999999766554 444454 6899999999 7 78887765 455566
Q ss_pred EECCC---cceeeeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348 84 WNIKT---DICIAIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK 159 (291)
Q Consensus 84 wd~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
|.+.. +... .+ .. ...+...+|+|+++. +++++.++.+.+||+.+++......
T Consensus 93 ~~~~~~~~g~~~-~l---~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~------------------ 149 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RL---EA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR------------------ 149 (582)
T ss_dssp EEEETTSTTCCE-EC---TT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE------------------
T ss_pred EEEeccCCCccc-cc---cC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec------------------
Confidence 55433 3332 33 12 223446688888863 3344445556699998876432211
Q ss_pred ccCcccccccccCcceeEEEEc--CCEEEEecCC----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEE
Q psy10348 160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFS 233 (291)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 233 (291)
+.. .+++|+ |++|++++.+ +.|.+||+.+++. ..+..+...+. ..+
T Consensus 150 -----------~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-------------~~l~~~~~~~~--~~~ 201 (582)
T 3o4h_A 150 -----------LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-------------RVFDSGEGSFS--SAS 201 (582)
T ss_dssp -----------ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-------------EEECCSSCEEE--EEE
T ss_pred -----------CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-------------eEeecCCCccc--cce
Confidence 222 567776 8899988777 7899999887653 34445555444 456
Q ss_pred ecCCCcEEEEEcCCC--cEEEEEcCCCCCCcceeEEEeccccccceeeeE--------EccCCceee
Q psy10348 234 MDYWQKILAVGNQSG--RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTT--------LSKNGNVLL 290 (291)
Q Consensus 234 ~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~g~~l~ 290 (291)
++|||++|+++..+| .|++||+.+++. . ....+...+.+++ |+|||.+++
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 261 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPRDGSV-----E--DLELPSKDFSSYRPTAITWLGYLPDGRLAV 261 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTTTCCE-----E--ECCCSCSHHHHHCCSEEEEEEECTTSCEEE
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCCCCcE-----E--EccCCCcChhhhhhccccceeEcCCCcEEE
Confidence 678899999888888 899999998752 1 2235667788888 999996654
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=5.2e-21 Score=165.55 Aligned_cols=239 Identities=8% Similarity=0.017 Sum_probs=153.0
Q ss_pred EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeecc---ceeEEEEecCCCcEEEEeec---------CCeE
Q psy10348 14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGH---AINELKFHPQDFNLLLSVSK---------DHTL 81 (291)
Q Consensus 14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~---------dg~i 81 (291)
.+++|+|++ .+++++ .|+.|++||+.+++....+..|.. .+.+++|+| |+++|++++. ++.|
T Consensus 19 ~~~~~s~dg----~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 19 FFPNWISGQ----EYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp CCCEESSSS----EEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEE
T ss_pred CccEECCCC----eEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEE
Confidence 367899988 355554 699999999999988777765544 389999999 9999998876 7899
Q ss_pred EEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
++||+.+++.+... .....+..++|+|||+.|+.+. |+.|++||+.+++....... +..
T Consensus 93 ~~~d~~~g~~~~~~----~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~-------~~~--------- 151 (719)
T 1z68_A 93 YIYDLSNGEFVRGN----ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN-------GRE--------- 151 (719)
T ss_dssp EEEETTTTEECCSS----CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC-------CBT---------
T ss_pred EEEECCCCccccce----ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC-------CCc---------
Confidence 99999988763211 1124688899999999999886 78999999988765322110 000
Q ss_pred CcccccccccCcc---------eeEEEEc--CCEEEEecCCC----------------------------------eEEE
Q psy10348 162 FPQFSTRDIHRNY---------VDCVRWL--GDFVLSKSCEN----------------------------------CIIC 196 (291)
Q Consensus 162 ~~~~~~~~~~~~~---------v~~~~~~--~~~l~~~~~d~----------------------------------~i~i 196 (291)
.....++... ..+++|+ |++|++++.|. .|++
T Consensus 152 ---~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~ 228 (719)
T 1z68_A 152 ---NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI 228 (719)
T ss_dssp ---TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred ---CCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Confidence 0000112222 2578888 67888776542 7888
Q ss_pred ecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----CcEEEEE----cCCCCCCcceeEEE
Q psy10348 197 WKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----GRTYVWD----LDVQDPSSIKFQIL 268 (291)
Q Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----g~i~vwd----~~~~~~~~~~~~~~ 268 (291)
||+.+++...... ......+..+...+.. ++++||++++++.... ..|.+|| +.+++...... .
T Consensus 229 ~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~--~ 300 (719)
T 1z68_A 229 IDTTYPAYVGPQE----VPVPAMIASSDYYFSW--LTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE--H 300 (719)
T ss_dssp EESSCHHHHCCEE----CCCCHHHHTSCEEEEE--EEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE--E
T ss_pred EECCCCCccceeE----ccCCccCCCCcceEEE--eEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe--c
Confidence 9887654210000 0000112334444444 4566778887775432 3488899 77665432110 0
Q ss_pred ecccccccee-----eeEEccCCceee
Q psy10348 269 SHPRCMSAVR-----QTTLSKNGNVLL 290 (291)
Q Consensus 269 ~~~~~~~~v~-----~~~~s~~g~~l~ 290 (291)
...+|.+.+. .++|+|||+.|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~ 327 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYY 327 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEE
T ss_pred ccccCCceEccccCCccEECCCCCeEE
Confidence 0024555666 889999999653
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=5.6e-19 Score=140.51 Aligned_cols=238 Identities=10% Similarity=0.003 Sum_probs=146.9
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCC----CeEEEEccCC--cce--eEEEeeeccceeEEEEecCCCcEEEEee-cCC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSR----AVIRIFSPAF--HAC--VRHFYGHGHAINELKFHPQDFNLLLSVS-KDH 79 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~d----g~i~vw~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg 79 (291)
+......++|+|++ ++|++++.+ +.|.+|+++. ++. +.....+......+++ ++++|++++ .++
T Consensus 48 ~~~~p~~l~~spdg----~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~ 120 (361)
T 3scy_A 48 EVANPSYLIPSADG----KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT---NGKNIVTANYSGG 120 (361)
T ss_dssp ECSCCCSEEECTTS----SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE---CSSEEEEEETTTT
T ss_pred cCCCCceEEECCCC----CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE---CCCEEEEEECCCC
Confidence 55667788999998 488888775 7999998865 433 2333334455666776 445555554 688
Q ss_pred eEEEEECCCcceeeeecc-----------ccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchh------hhhh-
Q psy10348 80 TLRLWNIKTDICIAIFGG-----------VEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEI------KDAC- 140 (291)
Q Consensus 80 ~i~vwd~~~~~~~~~~~~-----------~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~------~~~~- 140 (291)
.|.+|++.....+..+.. ...+...+.+++|+|+|+++++++ .++.|++|++..... +...
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 999999975443322110 011234468899999999776655 488999999875431 1000
Q ss_pred ccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCCCCCccccccCCCceeee
Q psy10348 141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPGRLEDKELRTNETNVTII 217 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 217 (291)
.. ......+......++|+ ++++++++ .++.|.+||+.++.. ..+
T Consensus 201 ~~----------------------~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~----------~~~ 248 (361)
T 3scy_A 201 TP----------------------EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML----------DEI 248 (361)
T ss_dssp EE----------------------EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE----------EEE
T ss_pred cc----------------------cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce----------EEe
Confidence 00 00000133446788998 66666665 689999999875532 112
Q ss_pred eeec---CCcccEEEEEEEecCCCcEEEEEcC--CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 218 NRLN---FKDCEIWFIRFSMDYWQKILAVGNQ--SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 218 ~~~~---~~~~~i~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
..+. .+.... ..++++|||++|+++.. ++.|.+|++............+. . ...+.+++|+|||++|+
T Consensus 249 ~~~~~~~~~~~~~--~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~-g~~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 249 QTVAADTVNAQGS--GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL--T-GIHPRNFIITPNGKYLL 321 (361)
T ss_dssp EEEESCSSCCCCE--EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--C-SSCCCEEEECTTSCEEE
T ss_pred EEEecCCCCCCCc--ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--C-CCCCceEEECCCCCEEE
Confidence 2222 222222 34567788999977665 48999999963211101112222 2 35788999999999876
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=3.2e-20 Score=160.28 Aligned_cols=235 Identities=11% Similarity=0.080 Sum_probs=147.1
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-EEEeeec-----------------cceeEEEEecCCCcEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-RHFYGHG-----------------HAINELKFHPQDFNLL 72 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~~l 72 (291)
..+..+.|. + ..+++++.++ | +||+.+++.+ ..+..|. ..|.+++|+| + ..+
T Consensus 26 ~~~~~~~w~--g----~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp-d-~~~ 95 (706)
T 2z3z_A 26 EYVVGLQWM--G----DNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG-R-GLV 95 (706)
T ss_dssp --CTTCEEE--T----TEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETT-T-TEE
T ss_pred ccCCCCcCc--C----CeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECC-C-CeE
Confidence 345567777 3 3677777777 8 9999999874 4454443 4699999999 6 454
Q ss_pred EEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-----chhhhhhccccccC
Q psy10348 73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-----PEIKDACAESYTFN 147 (291)
Q Consensus 73 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-----~~~~~~~~~~~~~~ 147 (291)
+.+ .++.|++||+.+++..... .+...+.+++|+|+|++|+++ .|+.|++||+.+ ++.........
T Consensus 96 ~~~-~~~~i~~~d~~~~~~~~l~----~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~--- 166 (706)
T 2z3z_A 96 VLF-TQGGLVGFDMLARKVTYLF----DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT--- 166 (706)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEE----CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB---
T ss_pred EEE-ECCEEEEEECCCCceEEcc----CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC---
Confidence 444 3599999999987765543 566778899999999999985 689999999988 65432211000
Q ss_pred CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec---------------------------------CCC
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS---------------------------------CEN 192 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~---------------------------------~d~ 192 (291)
...... .+ ....+...+.++.|+ |++|++++ .+.
T Consensus 167 ----~~~~~g----~~---~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 167 ----ETLVYG----QA---VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp ----TTEEES----SC---CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred ----CCeEcc----cc---hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 000000 00 001123346788898 77888776 457
Q ss_pred eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC-----cEEEEEcCCCCCCcceeEE
Q psy10348 193 CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG-----RTYVWDLDVQDPSSIKFQI 267 (291)
Q Consensus 193 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~ 267 (291)
.|.+||+.+++.. .+.....+...+ ..++++|||++|++++.++ .|++||+.+++... ..
T Consensus 236 ~l~~~d~~~~~~~----------~~~~~~~~~~~~--~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~---~~ 300 (706)
T 2z3z_A 236 TVGIYHLATGKTV----------YLQTGEPKEKFL--TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR---TL 300 (706)
T ss_dssp EEEEEETTTTEEE----------ECCCCSCTTCEE--EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE---EE
T ss_pred EEEEEECCCCceE----------eeccCCCCceeE--eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee---EE
Confidence 8999999876431 111111233333 4456678899999988775 89999999874221 12
Q ss_pred Ee--ccccccceeeeEEcc--CCceee
Q psy10348 268 LS--HPRCMSAVRQTTLSK--NGNVLL 290 (291)
Q Consensus 268 ~~--~~~~~~~v~~~~~s~--~g~~l~ 290 (291)
.. .......+.+++|+| ||++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~ 327 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIW 327 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEE
T ss_pred EEccCCCeECccCCceeecCCCCEEEE
Confidence 21 111112357899999 999875
No 153
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=5.7e-20 Score=159.57 Aligned_cols=231 Identities=10% Similarity=0.014 Sum_probs=158.2
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc----------------eeEEEEecCCCcE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA----------------INELKFHPQDFNL 71 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~~ 71 (291)
.+...+.+++||||+ ++|+.++ ++.|++||+.+++..+....+... +..++|+| |+++
T Consensus 149 ~~~~~~~~~~~SPDG----~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~ 222 (741)
T 2ecf_A 149 HGEGFATDAKLSPKG----GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSA 222 (741)
T ss_dssp CSSSCEEEEEECTTS----SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSC
T ss_pred cCCcccccccCCCCC----CEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECC-CCCE
Confidence 355789999999999 4888876 469999999988765544433332 47899999 9999
Q ss_pred EEEeecCC---------------------------------eEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEE
Q psy10348 72 LLSVSKDH---------------------------------TLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKI 117 (291)
Q Consensus 72 l~s~~~dg---------------------------------~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 117 (291)
|++++.|+ .|.+||+.+ ++...... ...|...+..++| |+|++|
T Consensus 223 l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~-pDg~~l 300 (741)
T 2ecf_A 223 IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDL-GKEQDIYLARVNW-RDPQHL 300 (741)
T ss_dssp EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECC-CSCSSEEEEEEEE-EETTEE
T ss_pred EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecC-CCCcceEEEEEEe-CCCCEE
Confidence 99987765 789999988 77554331 1247789999999 999999
Q ss_pred EEEec-----CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC
Q psy10348 118 MSCGM-----DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC 190 (291)
Q Consensus 118 ~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 190 (291)
++++. +..|++||+.+++....+.... ...-..+..++|+ |+++++++.
T Consensus 301 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~------------------------~~~~~~~~~~~~spdg~~~~~~~~ 356 (741)
T 2ecf_A 301 SFQRQSRDQKKLDLVEVTLASNQQRVLAHETS------------------------PTWVPLHNSLRFLDDGSILWSSER 356 (741)
T ss_dssp EEEEEETTSSEEEEEEEETTTCCEEEEEEEEC------------------------SSCCCCCSCCEECTTSCEEEEECT
T ss_pred EEEEecccCCeEEEEEEECCCCceEEEEEcCC------------------------CCcCCcCCceEECCCCeEEEEecC
Confidence 87764 5679999999887543332100 0000134567887 678888888
Q ss_pred CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE-EEcCCC--cEEEEEcCC-CCCCcceeE
Q psy10348 191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA-VGNQSG--RTYVWDLDV-QDPSSIKFQ 266 (291)
Q Consensus 191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-~~~~dg--~i~vwd~~~-~~~~~~~~~ 266 (291)
|+.+++|.+.... . ...+..+...+..+ ..++|+++.|+ +++.++ .++||++.. +... .
T Consensus 357 ~g~~~l~~~~~~~-----------~-~~~l~~~~~~v~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~----~ 419 (741)
T 2ecf_A 357 TGFQHLYRIDSKG-----------K-AAALTHGNWSVDEL-LAVDEKAGLAYFRAGIESARESQIYAVPLQGGQP----Q 419 (741)
T ss_dssp TSSCEEEEECSSS-----------C-EEESCCSSSCEEEE-EEEETTTTEEEEEECSSCTTCBEEEEEETTCCCC----E
T ss_pred CCccEEEEEcCCC-----------C-eeeeeecceEEEeE-eEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCe----e
Confidence 9988887664221 1 33444455445433 13557798775 455555 899999875 3211 2
Q ss_pred EEeccccccceeeeEEccCCceee
Q psy10348 267 ILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 267 ~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.+.. ...+.+++|||||++|+
T Consensus 420 ~l~~---~~~~~~~~~spdg~~l~ 440 (741)
T 2ecf_A 420 RLSK---APGMHSASFARNASVYV 440 (741)
T ss_dssp ECCC---SCSEEEEEECTTSSEEE
T ss_pred eccc---CCCceEEEECCCCCEEE
Confidence 2322 35678999999999886
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=3.4e-20 Score=166.39 Aligned_cols=221 Identities=13% Similarity=0.059 Sum_probs=163.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
.|...+.++.|+++. ++++++.++.++||.+.. +.....+..|. .+...+|+| +++.|+.+ .++.|.+||+
T Consensus 201 ~~~~~v~~~~~s~d~-----l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~Sp-DG~~la~~-~~~~i~~~d~ 272 (1045)
T 1k32_A 201 DMSTHVSSPVIVGHR-----IYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNT-DGRRILFS-KGGSIYIFNP 272 (1045)
T ss_dssp CCSSCCEEEEEETTE-----EEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEE-SSSCEEEE-ETTEEEEECT
T ss_pred CCCCcccceEEeCCE-----EEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcC-CCCEEEEE-eCCEEEEecC
Confidence 467889999999874 888888899999998653 44455565554 467789999 88888887 4899999999
Q ss_pred CCcceeeeeccccC-----------CCCceEEEEEc-cCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcccc
Q psy10348 87 KTDICIAIFGGVEG-----------HRDEVLSADFD-LLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRP 154 (291)
Q Consensus 87 ~~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (291)
... .+..+ .. |...+.+++|+ |+|++|++++ ++.+.+|++..++....
T Consensus 273 ~~~-~l~~l---~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~--------------- 332 (1045)
T 1k32_A 273 DTE-KIEKI---EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--------------- 332 (1045)
T ss_dssp TTC-CEEEC---CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---------------
T ss_pred Cce-Eeeee---ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---------------
Confidence 543 33344 23 34578999999 9999999888 88999999887653221
Q ss_pred ccCccccCcccccccccCc-ceeEEEEc-CCEEEEecCCCeEE-EecCCCCCccccccCCCceeeeeeecCCcccEEEEE
Q psy10348 155 FDTQKEHFPQFSTRDIHRN-YVDCVRWL-GDFVLSKSCENCII-CWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIR 231 (291)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~l~~~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 231 (291)
..|.. .+..++|+ ++.++.++.++.+. +||+..... ..+..+...+..
T Consensus 333 --------------~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~-------------~~l~~~~~~~~~-- 383 (1045)
T 1k32_A 333 --------------PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-------------EKFEENLGNVFA-- 383 (1045)
T ss_dssp --------------SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-------------EECCCCCCSEEE--
T ss_pred --------------cCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCc-------------eEecCCccceee--
Confidence 12445 67788887 55788777788888 999876532 223344444544
Q ss_pred EEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 232 FSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 232 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++|||++|++++.++.|++||+.+++. ..... +|.+.+.+++|||||++|++
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~----~~~~~--~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKP----TVIER--SREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE--CSSSCCCCEEECTTSCEEEE
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCce----EEecc--CCCCCccceEECCCCCeEEE
Confidence 55667899999999999999999998752 22322 56778999999999999863
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=1.3e-19 Score=156.95 Aligned_cols=233 Identities=10% Similarity=-0.007 Sum_probs=150.8
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccce------------------eEEEEecCCCcEEE
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI------------------NELKFHPQDFNLLL 73 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~l~ 73 (291)
.+.+++||||+ +.||.++. +.|++||+.+++..+....+...+ .+++|+| +++.|+
T Consensus 115 ~~~~~~~SPdG----~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la 188 (723)
T 1xfd_A 115 KLQYAGWGPKG----QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLA 188 (723)
T ss_dssp CCSBCCBCSST----TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEE
T ss_pred cccccEECCCC----CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEE
Confidence 47889999998 48888775 799999999888776665544433 7899999 999999
Q ss_pred EeecCC----------------------------------eEEEEECCCcceeeeecc---ccCCCCceEEEEEccCCCE
Q psy10348 74 SVSKDH----------------------------------TLRLWNIKTDICIAIFGG---VEGHRDEVLSADFDLLGTK 116 (291)
Q Consensus 74 s~~~dg----------------------------------~i~vwd~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~ 116 (291)
+++.|+ .|++||+.+++....+.. ...+...+..++|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~ 268 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV 268 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE
Confidence 887553 799999998876555520 0113678999999999998
Q ss_pred EEEEec----CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcce----eEEEEc--CCEEE
Q psy10348 117 IMSCGM----DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYV----DCVRWL--GDFVL 186 (291)
Q Consensus 117 l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~--~~~l~ 186 (291)
+++... +..|++||+.+++....+.. .+...+ ..++|+ |+.|+
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---------------------------~~~~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATTGVCTKKHED---------------------------ESEAWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTTCCEEEEEEE---------------------------ECSSCCCCCCCCCEECTTSCSEE
T ss_pred EEEEEcCCCCeEEEEEEeCCCCcceEEEEe---------------------------ccCCEEeccCCCceEcCCCCeEE
Confidence 877653 35799999988875433211 022222 256787 66555
Q ss_pred E--ecCCC------eEEEec-CCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC---CcEEEEE
Q psy10348 187 S--KSCEN------CIICWK-PGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS---GRTYVWD 254 (291)
Q Consensus 187 ~--~~~d~------~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~vwd 254 (291)
. +..++ .|.+|| ...... .....+......+.. ..+++|||++|+..+.+ +.+++|+
T Consensus 322 ~~~~~~~~~~~~~~~l~~~d~~~~~~~----------~~~~~l~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 322 FIRAIPQGGRGKFYHITVSSSQPNSSN----------DNIQSITSGDWDVTK-ILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEEECCSSSSCEEEEEEECSSCCSSS----------CCCCBSCCSSSCEEE-EEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred EEEecccCCCcceeEEEEEeccCCCCc----------cceeEeecCCeEEEe-eeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 3 45566 577777 333320 001122222222221 13566779999766544 7899999
Q ss_pred cCCCCCCcceeEEEec-cccccceeeeEEccCCceee
Q psy10348 255 LDVQDPSSIKFQILSH-PRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 255 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~ 290 (291)
+....... ...+.. ..+...+..++|+|||++|+
T Consensus 391 ~~~~~~~~--~~~l~~~~~~~~~~~~~~~spdg~~l~ 425 (723)
T 1xfd_A 391 ANTVGNFN--RQCLSCDLVENCTYFSASFSHSMDFFL 425 (723)
T ss_dssp ECSSTTCC--CBCSSTTSSSSCCCCEEEECTTSSEEE
T ss_pred EeCCCCCC--cceecccccCCCCeEEEEECCCCCEEE
Confidence 87543110 011211 11456788999999999886
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=1.2e-18 Score=138.68 Aligned_cols=241 Identities=11% Similarity=0.003 Sum_probs=151.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC-CcceeEEEeee-ccceeEEEEecCCCcE--EEEee----------
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA-FHACVRHFYGH-GHAINELKFHPQDFNL--LLSVS---------- 76 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~--l~s~~---------- 76 (291)
..+..++|+|++ ++|++++.+ .|.+|++. +++........ .+.+..++|+| ++++ +++++
T Consensus 40 ~~~~~~a~spdg----~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 40 EPISWMTFDHER----KNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCCSEEEECTTS----SEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEECCCC----CEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccce
Confidence 367789999998 488888887 99999997 77765433311 13466789999 8884 55553
Q ss_pred ---cCCeEEEEECC-Ccceeeeecccc-CCCCceEEEEEccCCCEEEEEec-CCcEEEEecc-CchhhhhhccccccCCC
Q psy10348 77 ---KDHTLRLWNIK-TDICIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDLT-KPEIKDACAESYTFNPA 149 (291)
Q Consensus 77 ---~dg~i~vwd~~-~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v~d~~-~~~~~~~~~~~~~~~~~ 149 (291)
.+|.+.+|++. .++....+.... .+...+.+++|+|+|++++++.. ++.|++||+. +++...... .
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~--~----- 186 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS--V----- 186 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE--E-----
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeee--E-----
Confidence 68999999997 455544332111 25567999999999998887764 6899999998 554321000 0
Q ss_pred CccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-CCeEEEecCCC--CCccccccCCCceeeeeeecC--
Q psy10348 150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-ENCIICWKPGR--LEDKELRTNETNVTIINRLNF-- 222 (291)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~-- 222 (291)
....|...+..++|+ |+++++++. ++.|.+|++.. ++.... ...+..+..
T Consensus 187 -----------------~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~------~~~~~~~~~~~ 243 (365)
T 1jof_A 187 -----------------DAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT------HHSFPLIPPGI 243 (365)
T ss_dssp -----------------ECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE------EEEEESSCTTC
T ss_pred -----------------ecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc------cceEEcCCCCc
Confidence 000134557889998 667776654 78999997653 321000 000111211
Q ss_pred --Ccc----cEEEEEEE-ecCCCcEEEEEcCC-C-----cEEEEEcC-CCCCCcceeEEEe-ccccccceeeeEEcc---
Q psy10348 223 --KDC----EIWFIRFS-MDYWQKILAVGNQS-G-----RTYVWDLD-VQDPSSIKFQILS-HPRCMSAVRQTTLSK--- 284 (291)
Q Consensus 223 --~~~----~i~~~~~~-~~~~~~~l~~~~~d-g-----~i~vwd~~-~~~~~~~~~~~~~-~~~~~~~v~~~~~s~--- 284 (291)
+.. ......++ ++|||++|++++.+ + .|.+|++. +++ ...... ...+...+..++|+|
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~----~~~~~~~~~~~~~~~~~~a~sp~~~ 319 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS----IEKQLFLSPTPTSGGHSNAVSPCPW 319 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC----EEEEEEEEECSSCCTTCCCEEECTT
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC----EEEeeeeeecCCCCcccceecCCCc
Confidence 111 00234456 67889998877643 2 89999996 442 212111 112334577899999
Q ss_pred CCceeeC
Q psy10348 285 NGNVLLC 291 (291)
Q Consensus 285 ~g~~l~s 291 (291)
||++|++
T Consensus 320 dg~~l~v 326 (365)
T 1jof_A 320 SDEWMAI 326 (365)
T ss_dssp CTTEEEE
T ss_pred CCCEEEE
Confidence 8998863
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=2.3e-18 Score=136.04 Aligned_cols=222 Identities=9% Similarity=-0.031 Sum_probs=142.4
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEeecC-------
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVSKD------- 78 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~d------- 78 (291)
.+..++|+|++. .+++++..++.|.+||+.+++.+..+..+ ...+..++|+| ++++|++++.+
T Consensus 44 ~~~~~~~s~dg~---~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNR---TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSS---EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSC
T ss_pred CCceeEECCCCC---EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccc
Confidence 578899999984 24456667899999999999888777632 23478999999 88999888865
Q ss_pred -----CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCC----
Q psy10348 79 -----HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA---- 149 (291)
Q Consensus 79 -----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~---- 149 (291)
+.|.+||+.+++....+.. ..+...+.+++|+|+|+ +++++ +.|.+||+.+++....+.......+.
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRT-FPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAP 195 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEE-EECCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred cccCCCeEEEEECCCccccceeee-ccCCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCc
Confidence 8999999988554332211 12334688999999999 66654 44999999988766544321100000
Q ss_pred CccccccC-------------------------------------ccccCcccccccccCcceeEEEEc---CCEEEEec
Q psy10348 150 RSTRPFDT-------------------------------------QKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKS 189 (291)
Q Consensus 150 ~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~ 189 (291)
.....+.. ...... ......+...+..++++ +++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sp~dg~~l~~~- 273 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH-TQEFADLTELYFTGLRSPKDPNQIYGV- 273 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECSSCTTEEEEE-
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE-ecccccCCCcceeeEecCCCCCEEEEE-
Confidence 00000000 000000 00001122345566665 4577776
Q ss_pred CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
++.|.+||+.+.+. +..+..... +. .++++|++++|++++.++.|++||+.+++
T Consensus 274 -~~~v~~~d~~~~~~------------~~~~~~~~~-~~--~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 274 -LNRLAKYDLKQRKL------------IKAANLDHT-YY--CVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp -ESEEEEEETTTTEE------------EEEEECSSC-CC--EEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred -cCeEEEEECccCeE------------EEEEcCCCC-cc--ceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 89999999988643 344433222 23 35566779999888889999999999874
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=5e-19 Score=153.47 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=92.9
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccc-----eeEEEEecCCCcEEEEeecC--------
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA-----INELKFHPQDFNLLLSVSKD-------- 78 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~s~~~d-------- 78 (291)
...+++|+|++ .+++++ ||.|++||+.+++....+.+|... ...+.|+| |+++|+.++.+
T Consensus 18 ~~~~~~w~~dg----~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 18 KLYSLRWISDH----EYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCEEECSSS----EEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCE
T ss_pred cccccEECCCC----cEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEcc
Confidence 45689999998 488876 899999999999987777776533 23478999 99999998876
Q ss_pred -CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhh
Q psy10348 79 -HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137 (291)
Q Consensus 79 -g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 137 (291)
+.+.+||+.+++... + ..+...+...+|||||+.|+.+. |+.|++||+.+++..
T Consensus 91 ~~~~~~~d~~~~~~~~-l---~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT-E---ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEEEEEEETTTTEECC-S---SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred ceEEEEEECCCCcEEE-c---ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 566799999887554 3 56778899999999999999885 789999999887643
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=1.4e-17 Score=131.69 Aligned_cols=212 Identities=14% Similarity=0.054 Sum_probs=135.0
Q ss_pred ecceeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCC-cc--eeEEEeee---------ccceeEEEEecCCCcEEEEe
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAF-HA--CVRHFYGH---------GHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~l~s~ 75 (291)
+...+..++|+|++. +|++++ .++.|.+|++.. +. .+..+... ...+.+++|+| +++++++.
T Consensus 84 ~~~~p~~~a~spdg~----~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~ 158 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQ----LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVID 158 (347)
T ss_dssp ESCCCSEEEEETTTT----EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEE
T ss_pred CCCCCEEEEECCCCC----EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEe
Confidence 466788999999984 777776 789999999963 32 23333211 12478899999 77877777
Q ss_pred ecCCeEEEEECC-CcceeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEeccC--chhhhhhccccccCCCCc
Q psy10348 76 SKDHTLRLWNIK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLTK--PEIKDACAESYTFNPARS 151 (291)
Q Consensus 76 ~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~~--~~~~~~~~~~~~~~~~~~ 151 (291)
..++.|.+|++. +++..............+..++|+|+|+++++ ...++.+.+|++.. ++... .......+..
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~--~~~~~~~~~~- 235 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ--LGIVKTIPAD- 235 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE--EEEEESSCTT-
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE--eeeeeecCCC-
Confidence 778899999998 45432211000123346788999999996666 45688999999875 32110 0000000000
Q ss_pred cccccCccccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348 152 TRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW 228 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (291)
......+..++|+ |++| ++...++.|.+|++...... ..+..+..+...+.
T Consensus 236 -----------------~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~---------~~~~~~~~~~~~~~ 289 (347)
T 3hfq_A 236 -----------------YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL---------TLIQQISTEGDFPR 289 (347)
T ss_dssp -----------------CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE---------EEEEEEECSSSCCC
T ss_pred -----------------CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE---------EEeEEEecCCCCcC
Confidence 0012457889998 6666 55666899999998632111 33444444333333
Q ss_pred EEEEEecCCCcEEEEEcC-CCcEEEEEcC
Q psy10348 229 FIRFSMDYWQKILAVGNQ-SGRTYVWDLD 256 (291)
Q Consensus 229 ~~~~~~~~~~~~l~~~~~-dg~i~vwd~~ 256 (291)
. ++++|+|++|++++. ++.|.+|++.
T Consensus 290 ~--~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 290 D--FDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp E--EEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred e--EEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 3 556788999888875 5899999554
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=1.2e-16 Score=122.87 Aligned_cols=226 Identities=12% Similarity=0.121 Sum_probs=154.9
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee------eccceeEEEEecCCCcEEEEeec-CCeEEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG------HGHAINELKFHPQDFNLLLSVSK-DHTLRL 83 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~s~~~-dg~i~v 83 (291)
....++++++++ .++++...++.|.+||.+ ++.+..+.. +...+..+++.+.++.++++... ++.|.+
T Consensus 30 ~~p~~v~~~~~g----~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 30 TEPSGVAVNAQN----DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp SCEEEEEECTTC----CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCCceEEECCCC----CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 567889999887 488888889999999987 666666642 33568899995327777776643 889999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
|| .+++.+..+. ..+...+.+++++++|+++++...++.|.+||.. ++....+..
T Consensus 105 ~d-~~g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~--------------------- 159 (286)
T 1q7f_A 105 YN-QYGQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC--------------------- 159 (286)
T ss_dssp EC-TTSCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC---------------------
T ss_pred EC-CCCcEEEEec--CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCC---------------------
Confidence 99 5577766652 2345678999999999988877778999999964 332222110
Q ss_pred ccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc--ccEEEEEEEecCCCc
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD--CEIWFIRFSMDYWQK 239 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~ 239 (291)
..+...+..++++ ++++++...++.|++||.... . +..+.... .... .++++++|+
T Consensus 160 -----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~------------~~~~~~~g~~~~p~--~i~~d~~G~ 219 (286)
T 1q7f_A 160 -----SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-Y------------LRQIGGEGITNYPI--GVGINSNGE 219 (286)
T ss_dssp -----TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-E------------EEEESCTTTSCSEE--EEEECTTCC
T ss_pred -----CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC-E------------EEEEccCCccCCCc--EEEECCCCC
Confidence 0133457888988 566777777999999997432 1 33333221 2333 455667799
Q ss_pred EEEEEcCCC-cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 240 ILAVGNQSG-RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 240 ~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
++++...++ .|.+|+... + ....+........+.+++++|+|+++++
T Consensus 220 l~v~~~~~~~~i~~~~~~g-~----~~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQDG-Q----LISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp EEEEECSSSCEEEEECTTS-C----EEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred EEEEeCCCCEEEEEECCCC-C----EEEEEcccCCCCcceeEEECCCCcEEEE
Confidence 888888776 999999643 2 2233332222335789999999987764
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=9.6e-18 Score=134.60 Aligned_cols=224 Identities=12% Similarity=0.058 Sum_probs=144.0
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEE--ecCCCcEEEEe--------------
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKF--HPQDFNLLLSV-------------- 75 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~-------------- 75 (291)
.+...+|+|++ +.|+.++.++.|++||+.+++....+..+...+....| +| ++.+++..
T Consensus 82 ~~~~~~~spdg----~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 82 NTFGGFLSPDD----DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp CSSSCEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHH
T ss_pred CccceEEcCCC----CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccc
Confidence 34467899998 59999998999999999999877766666665544444 78 77887742
Q ss_pred --------ecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecC------CcEEEEeccCchhhhhh
Q psy10348 76 --------SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMD------HSLKLWDLTKPEIKDAC 140 (291)
Q Consensus 76 --------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~ 140 (291)
..+..|.+||+.+++..... .+...+..+.|+| +|+.|+.+..+ ..|.++|+..+......
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTVIL----QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEEEE----EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred hhhhhhccCCcceEEEEECCCCceEEee----cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence 24478999999988755443 5667789999999 99988877653 36777777654422111
Q ss_pred ccccccCCCCccccccCccccCcccccccccC--cceeEEEEc--CCEEEEecC-C----CeEEEecCCCCCccccccCC
Q psy10348 141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHR--NYVDCVRWL--GDFVLSKSC-E----NCIICWKPGRLEDKELRTNE 211 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~l~~~~~-d----~~i~iwd~~~~~~~~~~~~~ 211 (291)
.+. ..+....|+ |+.|+..+. + ..|.+||+.+++.
T Consensus 233 -----------------------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------- 276 (388)
T 3pe7_A 233 -----------------------------THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN------- 276 (388)
T ss_dssp -----------------------------CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------
T ss_pred -----------------------------eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------
Confidence 022 346778887 665544332 2 2499999988764
Q ss_pred CceeeeeeecCCcccEEEE-EEEecCCCcEEEEE---------cCCCcEEEEEcCCCCCCcceeEEEecccccc------
Q psy10348 212 TNVTIINRLNFKDCEIWFI-RFSMDYWQKILAVG---------NQSGRTYVWDLDVQDPSSIKFQILSHPRCMS------ 275 (291)
Q Consensus 212 ~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~l~~~---------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~------ 275 (291)
+.+..+.......... ...++|||+.|+.. ..+..|++||+.+++. ..+. .+..
T Consensus 277 ---~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~--~~~~~~~~~~ 346 (388)
T 3pe7_A 277 ---RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-----HRVA--RHDTSWKVFE 346 (388)
T ss_dssp ---EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-----EEEE--ECCCCCCCBT
T ss_pred ---EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-----EEec--cccCcccccc
Confidence 2233332210000000 01244568888754 4567899999998642 2222 2222
Q ss_pred -----ceeeeEEccCCceee
Q psy10348 276 -----AVRQTTLSKNGNVLL 290 (291)
Q Consensus 276 -----~v~~~~~s~~g~~l~ 290 (291)
.+.+++|+|||+.|+
T Consensus 347 ~~~~~~~~~~~~spDg~~l~ 366 (388)
T 3pe7_A 347 GDRQVTHPHPSFTPDDKQIL 366 (388)
T ss_dssp TBSSTTCCCCEECTTSSEEE
T ss_pred cccccCCCCccCCCCCCEEE
Confidence 478899999999886
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=2.6e-18 Score=145.20 Aligned_cols=212 Identities=9% Similarity=0.042 Sum_probs=144.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEecC---CCeEEEEccCC---cceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAF---HACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRL 83 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~v 83 (291)
..+.+++|+|+ . ++++++. +...++|.+.. +... .+... ..+...+|+| +++ .+++.+.++.+.+
T Consensus 65 ~~~~~~~~spd-~----~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~-dg~~~~~~s~~~~~~~l 136 (582)
T 3o4h_A 65 NSVLDPHYGVG-R----VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVD-TGEAVVFTGATEDRVAL 136 (582)
T ss_dssp SEECEECTTCS-E----EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEE-CSSCEEEEEECSSCEEE
T ss_pred cccccccCCCC-e----EEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCC-CCCeEEEEecCCCCceE
Confidence 57889999988 3 7877764 45556655432 2222 33222 2344668888 554 3344444455669
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK 159 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
||+.+++..... .+.. .+++|+|||++|++++.| +.|++||+.+++... +
T Consensus 137 ~d~~~g~~~~l~----~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~-l------------------- 190 (582)
T 3o4h_A 137 YALDGGGLRELA----RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV-F------------------- 190 (582)
T ss_dssp EEEETTEEEEEE----EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE-E-------------------
T ss_pred EEccCCcEEEee----cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE-e-------------------
Confidence 999988765554 2222 789999999999988877 789999998876431 1
Q ss_pred ccCcccccccccCcceeEEEEc--CCEEEEecCCC--eEEEecCCCCCccccccCCCceeeeeeecCCcccEEE------
Q psy10348 160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN--CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF------ 229 (291)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------ 229 (291)
..|...+..++|+ |+.|+++..++ .|++||+.+++.. .+..+...+..
T Consensus 191 ---------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-------------~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 191 ---------DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-------------DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp ---------CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-------------ECCCSCSHHHHHCCSEE
T ss_pred ---------ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-------------EccCCCcChhhhhhccc
Confidence 2367778999998 77888888888 9999999877542 22333222221
Q ss_pred EEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 230 IRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 230 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
...+++|||.++++++.||.+++|++ ++. .. ...+.+.+++|+ +|++++
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~--g~~-------~~--~~~~~v~~~~~s-dg~~l~ 297 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID--GER-------VE--APQGNHGRVVLW-RGKLVT 297 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET--TEE-------EC--CCSSEEEEEEEE-TTEEEE
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE--CCe-------ec--cCCCceEEEEec-CCEEEE
Confidence 12336788999999999999999999 421 11 123578899999 998875
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=1e-16 Score=125.78 Aligned_cols=240 Identities=12% Similarity=0.104 Sum_probs=158.5
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCC------------------------CeEEEEccCCcceeEEEe-eeccceeEEEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSR------------------------AVIRIFSPAFHACVRHFY-GHGHAINELKF 64 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~d------------------------g~i~vw~~~~~~~~~~~~-~~~~~v~~~~~ 64 (291)
-..+.+++++|++ +++++...+ +.|.+||..+++.+..+. ++-.....+++
T Consensus 23 l~~v~~va~d~~G----~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 23 PGQVSGVALDSKN----NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CSCEEEEEECTTC----CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred cCCceEEEECCCC----CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 3678999999998 488877766 479999999898876654 33356889999
Q ss_pred ecCCCcEEEEeecCCeEEEEECCCcc-eeeeeccc------cCCCCceEEEEEcc-CCCEEEEEe-cCCcEEEEeccCch
Q psy10348 65 HPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGV------EGHRDEVLSADFDL-LGTKIMSCG-MDHSLKLWDLTKPE 135 (291)
Q Consensus 65 ~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~------~~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~v~d~~~~~ 135 (291)
+| +++++++...++.|++||..... .+..+... ..+......++++| ++.++++.+ .++.|++|| .+++
T Consensus 99 d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 99 DT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp CT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred CC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence 99 88888888889999999986432 44444210 13344689999999 787777776 689999999 4455
Q ss_pred hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCC
Q psy10348 136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNET 212 (291)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (291)
.+..+...- ... ....++......++++ +.++++...++.|++||..+++.
T Consensus 177 ~~~~~~~~g----~~~--------------~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~-------- 230 (329)
T 3fvz_A 177 FVTQWGEES----SGS--------------SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF-------- 230 (329)
T ss_dssp EEEEECEEC----CSS--------------SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--------
T ss_pred EEEEeccCC----CCC--------------CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--------
Confidence 443332100 000 0001133446788886 45677777889999999986643
Q ss_pred ceeeeeeec--CCcccEEEEEEEecC------CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEc
Q psy10348 213 NVTIINRLN--FKDCEIWFIRFSMDY------WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLS 283 (291)
Q Consensus 213 ~~~~~~~~~--~~~~~i~~~~~~~~~------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s 283 (291)
+..+. .+...+..+.+ +| +++..++...+..|++|++.+++. ...+. ...+...+.+++++
T Consensus 231 ----~~~~~~~~~~~~~~~~~~--~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~----~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 231 ----VREIKHASFGRNVFAISY--IPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI----IDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp ----EEEECCTTTTTCEEEEEE--ETTEEEEEECCCCTTCSCCCCEEEEETTTCCE----EEEECCSSSCCSSEEEEEEC
T ss_pred ----EEEEeccccCCCcceeee--cCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE----EEEEcCCCCccCCeeEEEEC
Confidence 34442 23334444444 34 233333334556899999998853 23332 13455678999999
Q ss_pred cCCceeeC
Q psy10348 284 KNGNVLLC 291 (291)
Q Consensus 284 ~~g~~l~s 291 (291)
|+|.++++
T Consensus 301 ~dG~lyva 308 (329)
T 3fvz_A 301 EDGTVYIG 308 (329)
T ss_dssp TTSEEEEE
T ss_pred CCCCEEEE
Confidence 99976653
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.8e-17 Score=132.95 Aligned_cols=221 Identities=13% Similarity=0.008 Sum_probs=144.7
Q ss_pred EEeeeccCCCCCEEEEecC-CC--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348 16 CAWSMDLESGRPLLAVAGS-RA--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92 (291)
Q Consensus 16 ~~~s~~~~~~~~~l~~~~~-dg--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 92 (291)
.+||||+ +.|+.++. +| .|.+||+.+++..+...++...+..+.|+| +++.|+.++.++.|++||+.+++..
T Consensus 41 ~~~SpDg----~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDG----SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp CCBCTTS----CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEE
T ss_pred ccCCCCC----CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcce
Confidence 6788888 47887776 66 488899998887766666666666789999 9999999999999999999998876
Q ss_pred eeeccccCCCCceEEEE--EccCCCEEEEE----------------------ecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 93 AIFGGVEGHRDEVLSAD--FDLLGTKIMSC----------------------GMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 93 ~~~~~~~~~~~~i~~~~--~~~~~~~l~~~----------------------~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
..+ ..+...+.... ++|++.+++.. ..+..|.+||+.+++.....
T Consensus 116 ~~~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-------- 184 (388)
T 3pe7_A 116 VVY---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-------- 184 (388)
T ss_dssp EEE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE--------
T ss_pred eee---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee--------
Confidence 665 34555554444 48999888743 23467888998877633221
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEcC---CEEEEecC------CCeEEEecCCCCCccccccCCCceeeeee
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG---DFVLSKSC------ENCIICWKPGRLEDKELRTNETNVTIINR 219 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (291)
.+...+..+.|++ +.|+.... ...|.++|...... ..
T Consensus 185 ---------------------~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-------------~~ 230 (388)
T 3pe7_A 185 ---------------------QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-------------RK 230 (388)
T ss_dssp ---------------------EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-------------EE
T ss_pred ---------------------cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-------------EE
Confidence 1445577888875 45655544 33788888765432 22
Q ss_pred ecCCcccEEEEEEEecCCCcEEEEEcC-CC----cEEEEEcCCCCCCcceeEEEeccccc---cceeeeEEccCCceee
Q psy10348 220 LNFKDCEIWFIRFSMDYWQKILAVGNQ-SG----RTYVWDLDVQDPSSIKFQILSHPRCM---SAVRQTTLSKNGNVLL 290 (291)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg----~i~vwd~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~ 290 (291)
+..+..........++|||+.|+..+. ++ .|++||+.+++. .......++. .....++|+|||+.|+
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~~~~~~~spdg~~l~ 305 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN----RQLTSMPACSHLMSNYDGSLMVGDGSDAP 305 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE----EEEEEECCEEEEEECTTSSEEEEEECCC-
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce----EEEEcCCCceeeeecCCCCeEccCCCcce
Confidence 222222223345567788997765443 22 399999998853 1121221211 1133458999999876
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=2.6e-16 Score=125.14 Aligned_cols=222 Identities=9% Similarity=0.049 Sum_probs=136.4
Q ss_pred eeEEEEeeeccCCCCCEEEEec-CCCeEEEEccCCcceeEE---Eeee-----------ccceeEEEEecCCCcEEEEee
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAG-SRAVIRIFSPAFHACVRH---FYGH-----------GHAINELKFHPQDFNLLLSVS 76 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~---~~~~-----------~~~v~~~~~~~~~~~~l~s~~ 76 (291)
....+++ ++ ++|++++ .++.|.+|++.....+.. ...+ ...+.+++|+| +++++++++
T Consensus 101 ~p~~~~~--dg----~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~ 173 (361)
T 3scy_A 101 DPCYLTT--NG----KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADD 173 (361)
T ss_dssp CEEEEEE--CS----SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEE
T ss_pred CcEEEEE--CC----CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEe
Confidence 4445555 44 4555554 688999999975432221 1111 12347899999 888665554
Q ss_pred -cCCeEEEEECCCcce------e------eeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhcc
Q psy10348 77 -KDHTLRLWNIKTDIC------I------AIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAE 142 (291)
Q Consensus 77 -~dg~i~vwd~~~~~~------~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~ 142 (291)
.++.|.+|++..... + .... ..+...+..++|+|+|+++++++ .++.|.+||+.+++......
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~- 250 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFK--VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT- 250 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE--CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE-
T ss_pred CCCCEEEEEEEcCCCCcccccceeeccccccee--cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE-
Confidence 578999998875431 1 1111 24456678999999999887777 58999999998664321100
Q ss_pred ccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC--CCeEEEecCCC--CCccccccCCCceee
Q psy10348 143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC--ENCIICWKPGR--LEDKELRTNETNVTI 216 (291)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--d~~i~iwd~~~--~~~~~~~~~~~~~~~ 216 (291)
+.....+......++|+ |++|+++.. ++.|.+|++.. +.. ..
T Consensus 251 ----------------------~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~----------~~ 298 (361)
T 3scy_A 251 ----------------------VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL----------TK 298 (361)
T ss_dssp ----------------------EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE----------EE
T ss_pred ----------------------EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE----------EE
Confidence 00011133445788998 777766555 48999999862 221 22
Q ss_pred eeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcC--CCCCCcceeEEEeccccccceeeeEEc
Q psy10348 217 INRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLD--VQDPSSIKFQILSHPRCMSAVRQTTLS 283 (291)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s 283 (291)
+..+.. ...+. .++++|+|++|++++ .++.|.+|++. +++. ..+....+...+.|++|.
T Consensus 299 ~~~~~~-g~~~~--~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~-----~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 299 VGYQLT-GIHPR--NFIITPNGKYLLVACRDTNVIQIFERDQATGLL-----TDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEC-SSCCC--EEEECTTSCEEEEEETTTTEEEEEEECTTTCCE-----EECSCCEECSSEEEEEEE
T ss_pred eeEecC-CCCCc--eEEECCCCCEEEEEECCCCCEEEEEEECCCCcE-----eecceeeeCCCCeEEEEc
Confidence 333333 22222 456678899988887 67899997665 4431 222222334578888886
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=5.9e-18 Score=146.49 Aligned_cols=231 Identities=11% Similarity=0.043 Sum_probs=144.0
Q ss_pred eEEEEeeeccCCCCCEEEEecC---------CCeEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGS---------RAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~---------dg~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
+.+++||||+ ++|+.++. ++.|++||+++++.+ ..+ ...+..++|+| +|+.|+.+. ++.|
T Consensus 62 ~~~~~~SpDg----~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i 132 (719)
T 1z68_A 62 ASNYGLSPDR----QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNI 132 (719)
T ss_dssp CSEEEECTTS----SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEE
T ss_pred eeeEEECCCC----CeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECC-CCCEEEEEE-CCeE
Confidence 8899999999 48888876 789999999988762 222 35688999999 999999885 7899
Q ss_pred EEEECCCcceeeeeccccCCCCce-----------------EEEEEccCCCEEEEEecCC--------------------
Q psy10348 82 RLWNIKTDICIAIFGGVEGHRDEV-----------------LSADFDLLGTKIMSCGMDH-------------------- 124 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~l~~~~~d~-------------------- 124 (291)
++||+.+++...... .++...| .+++|+|||++|++++.|.
T Consensus 133 ~~~~~~~g~~~~l~~--~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 133 YLKQRPGDPPFQITF--NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEESSTTSCCEECCC--CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred EEEeCCCCCcEEEec--CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 999998887654331 2333222 4899999999999988652
Q ss_pred --------------cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe
Q psy10348 125 --------------SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK 188 (291)
Q Consensus 125 --------------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 188 (291)
.|++||+.+++....+. ...-..+..|...+..++|+ +.++++.
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE--------------------VPVPAMIASSDYYFSWLTWVTDERVCLQW 270 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEE--------------------CCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeE--------------------ccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence 67778877766420000 00001122477889999998 4455553
Q ss_pred cC--C--CeEEEec----CCCCCccccccCCCceeeeeeecCCcccEE---EEEEEecCCCcEEEE--EcCCC--cEEEE
Q psy10348 189 SC--E--NCIICWK----PGRLEDKELRTNETNVTIINRLNFKDCEIW---FIRFSMDYWQKILAV--GNQSG--RTYVW 253 (291)
Q Consensus 189 ~~--d--~~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~l~~--~~~dg--~i~vw 253 (291)
.. + ..|.+|| ..+++...+.. .....+...+. .....++|||+.|+. ...+| .|.+|
T Consensus 271 ~~~~~~~~~l~~~d~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 271 LKRVQNVSVLSICDFREDWQTWDCPKTQE--------HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp EESSTTEEEEEEEEECSSSSSEECCGGGE--------EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred eccccCeEEEEEEcccCCCCCCceEEEEe--------cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence 22 2 3588899 66554321110 00012222222 002345677986544 44555 56677
Q ss_pred EcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 254 DLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 254 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
|+.+++. ..+. .+...+..+.++ +++.|+
T Consensus 343 ~~~~~~~-----~~lt--~~~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 343 KDTVENA-----IQIT--SGKWEAINIFRV-TQDSLF 371 (719)
T ss_dssp SSCSTTC-----EECS--CSSSCEEEEEEE-CSSEEE
T ss_pred ECCCCce-----Eecc--cCceEEEEEEEE-eCCEEE
Confidence 7766541 2222 233456677777 776654
No 167
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.77 E-value=8e-16 Score=117.29 Aligned_cols=216 Identities=10% Similarity=0.019 Sum_probs=150.9
Q ss_pred CCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCc
Q psy10348 26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE 104 (291)
Q Consensus 26 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 104 (291)
+++|++++.++.|.+||.++|+.+..+..+. ..+.++.+.| ++++++ +.++.|..||. +++.+..+. .+....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~--~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIA--APAGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEE--CCTTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEc--CCCCcc
Confidence 3599999999999999999999999998765 4789999999 889888 34778999999 799888883 122357
Q ss_pred eEEEEEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348 105 VLSADFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-- 181 (291)
Q Consensus 105 i~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 181 (291)
+.++.+.++|+++++.+. ++.+..+|. +++.+..+... ... ..+......+++.
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~----~~~------------------~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE----TGI------------------ERPHAQFRQINKNKK 135 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC----CSC------------------SSGGGSCSCCEECTT
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc----CCC------------------CcccccccCceECCC
Confidence 889999999999999887 777877775 56655443210 000 0011122233343
Q ss_pred CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCC
Q psy10348 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPS 261 (291)
Q Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 261 (291)
|+++++...++.|..||.. ++. +.++..... ... ....++++++++++.++.|..+|..+++.+
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~------------~w~~~~~~~-~~~--~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQL------------LNSVKLSGT-PFS--SAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCE------------EEEEECSSC-CCE--EEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred CCEEEEecCCCEEEEECCC-CCE------------EEEEECCCC-ccc--eeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 8899999999999999987 643 555554322 222 344577999999998889999999988632
Q ss_pred cceeEEEeccc----cccceeeeEEccCCceee
Q psy10348 262 SIKFQILSHPR----CMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 262 ~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~ 290 (291)
..+.... ....+.+++..++|++++
T Consensus 200 ----w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 200 ----RRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp ----EEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred ----EEecCCCCCCccccccccceEcCCCCEEE
Confidence 2222110 112356666666766655
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=1.1e-15 Score=131.92 Aligned_cols=226 Identities=12% Similarity=-0.046 Sum_probs=145.4
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCC-----eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCe------
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRA-----VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT------ 80 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~------ 80 (291)
.+..++||||+. +||.+..++ .|++||+.+++.+.....+ ..+..++|+| |++.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~----~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 126 ALRGYAFSEDGE----YFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEECTTSS----EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred EEEEEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccccc
Confidence 578899999994 887765543 8999999999876643322 2377899999 8898888887765
Q ss_pred ----------EEEEECCCccee--eeeccccCCCCceEEEEEccCCCEEEEEec-----CCcEEEEeccC------ch-h
Q psy10348 81 ----------LRLWNIKTDICI--AIFGGVEGHRDEVLSADFDLLGTKIMSCGM-----DHSLKLWDLTK------PE-I 136 (291)
Q Consensus 81 ----------i~vwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~------~~-~ 136 (291)
|++|++.+++.. ..+. ...+...+..+.|+|+|++|+.++. +..|.+||+.+ +. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAE-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEec-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999877632 2221 1335566889999999999888765 56899999876 32 1
Q ss_pred hhhhccccccCCCCccccccCccccCcccccccccCcceeEE-EEcCCEEEEecC----CCeEEEecCCCCCccccccCC
Q psy10348 137 KDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCV-RWLGDFVLSKSC----ENCIICWKPGRLEDKELRTNE 211 (291)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~ 211 (291)
...+. .+...+... .-.|+.|+..+. ...|.+||+.+....
T Consensus 279 ~~~l~----------------------------~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~------ 324 (710)
T 2xdw_A 279 WVKLI----------------------------DNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES------ 324 (710)
T ss_dssp CEEEE----------------------------CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG------
T ss_pred eEEee----------------------------CCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc------
Confidence 11111 122222222 222665554443 347999998775320
Q ss_pred CceeeeeeecCCcc--cEEEEEEEecCCCcEEEEEcCCCc--EEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc
Q psy10348 212 TNVTIINRLNFKDC--EIWFIRFSMDYWQKILAVGNQSGR--TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN 287 (291)
Q Consensus 212 ~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l~~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 287 (291)
....+..+.. .+..+.+ .+++.++++...|+. |.+|++.+++. ...+. .+.+.+..++++|+++
T Consensus 325 ----~~~~l~~~~~~~~~~~~~~--~~~~~lv~~~~~~g~~~l~~~~~~~g~~----~~~l~--~~~~~v~~~~~s~d~~ 392 (710)
T 2xdw_A 325 ----KWKVLVPEHEKDVLEWVAC--VRSNFLVLCYLHDVKNTLQLHDLATGAL----LKIFP--LEVGSVVGYSGQKKDT 392 (710)
T ss_dssp ----GCEEEECCCSSCEEEEEEE--ETTTEEEEEEEETTEEEEEEEETTTCCE----EEEEC--CCSSEEEEEECCTTCS
T ss_pred ----cceeccCCCCCCeEEEEEE--EcCCEEEEEEEECCEEEEEEEECCCCCE----EEecC--CCCceEEEEecCCCCC
Confidence 0122333322 3444444 456788888888885 56667656542 23333 2356788999999987
Q ss_pred eee
Q psy10348 288 VLL 290 (291)
Q Consensus 288 ~l~ 290 (291)
.|+
T Consensus 393 ~l~ 395 (710)
T 2xdw_A 393 EIF 395 (710)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=2.5e-15 Score=119.22 Aligned_cols=242 Identities=10% Similarity=0.019 Sum_probs=150.7
Q ss_pred EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEeec-
Q psy10348 15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVSK- 77 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~- 77 (291)
.++|+|++ ++++++. .++.|.+||..+++.+..+... ......++++| ++++|+++..
T Consensus 54 ~i~~spdg----~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~ 128 (361)
T 2oiz_A 54 HVQVSNDG----KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNAS 128 (361)
T ss_dssp EEEECTTS----SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEES
T ss_pred ceEECCCC----CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCC
Confidence 88999998 4888775 3678999999999988887643 24567899999 8999988864
Q ss_pred -CCeEEEEECCCcceeee-eccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccC-chhhhhhccccccCC-----
Q psy10348 78 -DHTLRLWNIKTDICIAI-FGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNP----- 148 (291)
Q Consensus 78 -dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~----- 148 (291)
++.|.+||+.+++.+.. +. .. ....+.+.|++ ..+++.+.||.+.+|++.. ++..........+.+
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~----~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTA----AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI 203 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGG----GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB
T ss_pred CCCeEEEEECCCCcEEEEEec----CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce
Confidence 57899999999988777 52 22 22335567765 5778888899999998865 433211100001111
Q ss_pred ------CCccccccCccccCc----------cccccc------c----cCcceeEEEEc--CCEEEEecC----------
Q psy10348 149 ------ARSTRPFDTQKEHFP----------QFSTRD------I----HRNYVDCVRWL--GDFVLSKSC---------- 190 (291)
Q Consensus 149 ------~~~~~~~~~~~~~~~----------~~~~~~------~----~~~~v~~~~~~--~~~l~~~~~---------- 190 (291)
++....+........ ...... . .......++|+ ++.+++...
T Consensus 204 ~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence 110100000000000 000000 0 00111125666 455555432
Q ss_pred -CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEe
Q psy10348 191 -ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILS 269 (291)
Q Consensus 191 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 269 (291)
.+.|.+||+.+.+ .+.++..+. .+.+. ++|||++|++++. +.|.+||..+++. + ..-.
T Consensus 284 ~~~~v~viD~~t~~------------~v~~i~~~~--p~~ia--~spdg~~l~v~n~-~~v~v~D~~t~~l--~--~~~~ 342 (361)
T 2oiz_A 284 PAAEIWVMDTKTKQ------------RVARIPGRD--ALSMT--IDQQRNLMLTLDG-GNVNVYDISQPEP--K--LLRT 342 (361)
T ss_dssp CCSEEEEEETTTTE------------EEEEEECTT--CCEEE--EETTTTEEEEECS-SCEEEEECSSSSC--E--EEEE
T ss_pred CCceEEEEECCCCc------------EEEEEecCC--eeEEE--ECCCCCEEEEeCC-CeEEEEECCCCcc--e--eeEE
Confidence 3589999998874 367776665 44544 4577999999887 9999999998721 1 1111
Q ss_pred ccccccceeeeEEccCCc
Q psy10348 270 HPRCMSAVRQTTLSKNGN 287 (291)
Q Consensus 270 ~~~~~~~v~~~~~s~~g~ 287 (291)
..........++++|+|.
T Consensus 343 i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 343 IEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTSCSSEEEEEECCCSC
T ss_pred eccCCCCcEEEEecCCCC
Confidence 124456778999999986
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=7.1e-15 Score=115.45 Aligned_cols=234 Identities=12% Similarity=-0.010 Sum_probs=149.6
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC----CeEEEEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD----HTLRLWN 85 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~vwd 85 (291)
...+.+++|++++ .+++++..++.|.+||.++++.......+...+.+++++| +++++++...+ +.|.+||
T Consensus 44 ~~~~~~~~~~~~g----~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 44 GLQLEGLNFDRQG----QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp CCCEEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC
T ss_pred CccccCcEECCCC----CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe
Confidence 3456889999887 4788888899999999988876554445667899999999 88888877666 6899999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec------CCcEEEEeccCchhhhhhccccccCCCCccccccCcc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQK 159 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
..++.....+.. ..+...+.+++++|+|+++++... .+.|..+|..+++.....
T Consensus 119 ~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------- 178 (333)
T 2dg1_A 119 ENGDNLQDIIED-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII------------------- 178 (333)
T ss_dssp TTSCSCEEEECS-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-------------------
T ss_pred CCCCEEEEEEcc-CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-------------------
Confidence 987765433311 134567899999999987776653 245555655443321110
Q ss_pred ccCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCC-CccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348 160 EHFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRL-EDKELRTNETNVTIINRLNFKDCEIWFIRFSMD 235 (291)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (291)
.+...+..++|+ ++.+ ++.+.++.|.+||+... ....... ......+..+ ... -.++++
T Consensus 179 ----------~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~----~~~~~~~~~~-~~~--~~i~~d 241 (333)
T 2dg1_A 179 ----------QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG----ATIPYYFTGH-EGP--DSCCID 241 (333)
T ss_dssp ----------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE----EEEEEECCSS-SEE--EEEEEB
T ss_pred ----------cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccccc----ceEEEecCCC-CCC--CceEEC
Confidence 022236678887 5544 45556889999998642 2110000 0001111211 122 235667
Q ss_pred CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc----ccccceeeeEEccCCceee
Q psy10348 236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP----RCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~ 290 (291)
++|+++++...++.|.+||.. ++ ....+... ++...+.+++|+||++.|.
T Consensus 242 ~~G~l~v~~~~~~~v~~~d~~-g~----~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 242 SDDNLYVAMYGQGRVLVFNKR-GY----PIGQILIPGRDEGHMLRSTHPQFIPGTNQLI 295 (333)
T ss_dssp TTCCEEEEEETTTEEEEECTT-SC----EEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred CCCCEEEEEcCCCEEEEECCC-CC----EEEEEEcCCCccccccCcceEEECCCCCEEE
Confidence 889988887788999999984 32 22333321 1222688999999986653
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=4.2e-16 Score=124.09 Aligned_cols=222 Identities=9% Similarity=0.057 Sum_probs=136.1
Q ss_pred EEEEecCC--CeEEEEcc--CCcceeEE--Ee-eeccceeEEEEecCCCcEEEEeecCCeEEEEECC-Ccceeeeecccc
Q psy10348 28 LLAVAGSR--AVIRIFSP--AFHACVRH--FY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK-TDICIAIFGGVE 99 (291)
Q Consensus 28 ~l~~~~~d--g~i~vw~~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~ 99 (291)
.+++|+.. +.|.+|++ +++++... .. .....+..++|+| ++++|++++.+ .|.+|++. +++....... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~-~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASH-P 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEE-E
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEe-e
Confidence 45566543 56888765 45654221 11 1234688999999 88999998887 99999997 6765443210 1
Q ss_pred CCCCceEEEEEccCCCE--EEEEe-------------cCCcEEEEeccC-chhhhhhccccccCCCCccccccCccccCc
Q psy10348 100 GHRDEVLSADFDLLGTK--IMSCG-------------MDHSLKLWDLTK-PEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 100 ~~~~~i~~~~~~~~~~~--l~~~~-------------~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
.+ +.+.+++|+|+|++ ++++. .++.+.+|++.. ++....+.. .
T Consensus 81 ~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~-~------------------- 139 (365)
T 1jof_A 81 IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN-Y------------------- 139 (365)
T ss_dssp CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE-E-------------------
T ss_pred cC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee-E-------------------
Confidence 11 23556899999994 45553 689999999974 443221110 0
Q ss_pred ccccccccCcceeEEEEc--CCEEEEec-CCCeEEEecCC-CCCccccccCCCceeeeeeecC--CcccEEEEEEEecCC
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFVLSKS-CENCIICWKPG-RLEDKELRTNETNVTIINRLNF--KDCEIWFIRFSMDYW 237 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~ 237 (291)
...+...+.+++|+ |++++++. .++.|.+||+. +++. ..+..+.. +...... ++++|+
T Consensus 140 ----~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~----------~~~~~~~~~~~g~~p~~--~~~spd 203 (365)
T 1jof_A 140 ----EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV----------ELVGSVDAPDPGDHPRW--VAMHPT 203 (365)
T ss_dssp ----ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE----------EEEEEEECSSTTCCEEE--EEECTT
T ss_pred ----EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE----------EEeeeEecCCCCCCCCE--eEECCC
Confidence 00134568889998 66777655 46899999997 4432 11233321 2333443 456788
Q ss_pred CcEEEEEc-CCCcEEEEEcCC--CCCCcceeEEEe-cc----cccc------ceeeeE-EccCCceee
Q psy10348 238 QKILAVGN-QSGRTYVWDLDV--QDPSSIKFQILS-HP----RCMS------AVRQTT-LSKNGNVLL 290 (291)
Q Consensus 238 ~~~l~~~~-~dg~i~vwd~~~--~~~~~~~~~~~~-~~----~~~~------~v~~~~-~s~~g~~l~ 290 (291)
|++|++++ .++.|.+|++.. ++... ....+. .+ ++.. .+.+++ |+|||++|+
T Consensus 204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 204 GNYLYALMEAGNRICEYVIDPATHMPVY-THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCEEEEEECCCCeEEEEEEeCCCCcEEE-ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 99998876 478999998763 32100 001121 11 2222 588999 999999875
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=1.1e-15 Score=121.33 Aligned_cols=103 Identities=7% Similarity=0.013 Sum_probs=82.8
Q ss_pred CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec----------CCeEEEEECCCcceeeeeccccC---
Q psy10348 34 SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK----------DHTLRLWNIKTDICIAIFGGVEG--- 100 (291)
Q Consensus 34 ~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----------dg~i~vwd~~~~~~~~~~~~~~~--- 100 (291)
.|+.|.+||..+++.+..+..+..+ .++|+| +++++++++. ++.|.+||..+++.+..+.....
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 4789999999999998888876665 899999 8898888763 67799999998888777632111
Q ss_pred CCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhh
Q psy10348 101 HRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDA 139 (291)
Q Consensus 101 ~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~ 139 (291)
+......++++|+|++|+++.. ++.|.+||+.+++.+..
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 2345678999999999998874 58999999999887665
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=3.3e-15 Score=115.45 Aligned_cols=224 Identities=12% Similarity=-0.031 Sum_probs=147.4
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
+.....+++|+|+++ .+++++..++.|..|+..++ ...+..+...+.++++++ ++.++++...++.|.+||..+
T Consensus 26 ~~~~~eg~~~d~~g~---~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 26 GFTWTEGPVYVPARS---AVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp CCSSEEEEEEEGGGT---EEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTT
T ss_pred CCccccCCeEeCCCC---EEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCC
Confidence 445677899999983 37888888999999999877 666766778899999999 888888777778999999987
Q ss_pred cceeeeeccccC-CCCceEEEEEccCCCEEEEE----ec-------------CCcEEEEeccCchhhhhhccccccCCCC
Q psy10348 89 DICIAIFGGVEG-HRDEVLSADFDLLGTKIMSC----GM-------------DHSLKLWDLTKPEIKDACAESYTFNPAR 150 (291)
Q Consensus 89 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~----~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 150 (291)
++.......... ....+..++++|+|+++++. +. .+.|..++.. ++.. .+
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~---------- 167 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-AP---------- 167 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EE----------
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Ee----------
Confidence 875543311111 12346789999999988873 31 2344444443 2211 11
Q ss_pred ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCC-CCCc-cccccCCCceeeeeeecCCccc
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPG-RLED-KELRTNETNVTIINRLNFKDCE 226 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
..+......++|+ ++.+++.+.++.|.+|++. .+.. . . ...+......
T Consensus 168 ------------------~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~---------~-~~~~~~~~~~ 219 (296)
T 3e5z_A 168 ------------------IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEY---------Q-GVHFTVEPGK 219 (296)
T ss_dssp ------------------ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEE---------E-EEEECCSSSC
T ss_pred ------------------ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcC---------C-CeEeeCCCCC
Confidence 1133446788897 6677778888999999986 2221 0 0 1111112222
Q ss_pred EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEE-ccCCceee
Q psy10348 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTL-SKNGNVLL 290 (291)
Q Consensus 227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~ 290 (291)
+. .++++++|+++++. ++.|.+|+.. ++ ....+. .+.. +.+++| +|+++.|.
T Consensus 220 p~--~i~~d~~G~l~v~~--~~~v~~~~~~-g~----~~~~~~--~~~~-~~~~~f~~~d~~~L~ 272 (296)
T 3e5z_A 220 TD--GLRVDAGGLIWASA--GDGVHVLTPD-GD----ELGRVL--TPQT-TSNLCFGGPEGRTLY 272 (296)
T ss_dssp CC--SEEEBTTSCEEEEE--TTEEEEECTT-SC----EEEEEE--CSSC-CCEEEEESTTSCEEE
T ss_pred CC--eEEECCCCCEEEEc--CCeEEEECCC-CC----EEEEEE--CCCC-ceeEEEECCCCCEEE
Confidence 22 25567889866666 7889999986 32 223333 2334 889999 58888664
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=7.1e-16 Score=132.87 Aligned_cols=225 Identities=10% Similarity=-0.004 Sum_probs=142.7
Q ss_pred ceeEEEEeeeccCCCCCEEE-----EecCCCeEEEEccCCcceeEEEeeeccce--eEEEEecCCCcEEEEeecCCe---
Q psy10348 11 ENFYTCAWSMDLESGRPLLA-----VAGSRAVIRIFSPAFHACVRHFYGHGHAI--NELKFHPQDFNLLLSVSKDHT--- 80 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~-----~~~~dg~i~vw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~dg~--- 80 (291)
..+.+++||||+. +|| .|+.+..|++||+++++.+. ..+...+ ..++|+| +++.|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~----~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 121 VSLGTWAVSWDGK----KVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSI 193 (695)
T ss_dssp EEEEEEEECTTSS----EEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTS
T ss_pred EEEEEEEECCCCC----EEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCC
Confidence 3688999999994 777 44445789999999988651 1122222 6899999 8899998888765
Q ss_pred ----------EEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEecCC----cEEEEeccCchhhhhhcccc
Q psy10348 81 ----------LRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH----SLKLWDLTKPEIKDACAESY 144 (291)
Q Consensus 81 ----------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~ 144 (291)
|++|++.++.. ...+ ....+...+..+.|+|+|++|+.++.++ .|.+||..+++.. .+.
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~-~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~--- 268 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVH-ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV--- 268 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEE-CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE---
T ss_pred ccccCCCCCEEEEEECCCCchhceEEE-ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee---
Confidence 99999988762 2222 1134566889999999999998887666 5666655443321 111
Q ss_pred ccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEec---CCCeEEEecCCCCCccccccCCCceeeeeee
Q psy10348 145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKS---CENCIICWKPGRLEDKELRTNETNVTIINRL 220 (291)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 220 (291)
.+...+....+. +++++... .++.|.+||+.+.... ....+
T Consensus 269 -------------------------~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~----------~~~~l 313 (695)
T 2bkl_A 269 -------------------------KGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARA----------SWKEI 313 (695)
T ss_dssp -------------------------ECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGG----------GCEEE
T ss_pred -------------------------cCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCcc----------CCeEE
Confidence 122233334444 55444433 2589999999775421 01122
Q ss_pred cCC--cccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC-CCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 221 NFK--DCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV-QDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 221 ~~~--~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
..+ ...+..+.+ + ++.++++...|+..++|.+.. ++ ....+.. ...+.+..++++|+++.|+
T Consensus 314 ~~~~~~~~l~~~~~--~-~~~lv~~~~~dg~~~l~~~~~~g~----~~~~l~~-~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 314 VPEDSSASLLSVSI--V-GGHLSLEYLKDATSEVRVATLKGK----PVRTVQL-PGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp ECCCSSCEEEEEEE--E-TTEEEEEEEETTEEEEEEEETTCC----EEEECCC-SSSSEECCCBSCTTCSEEE
T ss_pred ecCCCCCeEEEEEE--E-CCEEEEEEEECCEEEEEEEeCCCC----eeEEecC-CCCeEEEEeecCCCCCEEE
Confidence 222 233444444 3 478889999999988887652 32 1122221 2246788899999998765
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=7.2e-17 Score=129.73 Aligned_cols=219 Identities=11% Similarity=0.004 Sum_probs=135.2
Q ss_pred eEEEEeeeccCCCCCEEEEecC---CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGS---RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
+.+++|||++ ++|+.... +..|.+||+.+++.......+......+.|+| +++.|+.++.++.|.+||+.++
T Consensus 38 ~~~~~~SpdG----~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQDG----KKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCTTS----CEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCCCC----CEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCC
Confidence 6678899988 47666543 34788999988775443333323333488999 9999999999999999999988
Q ss_pred ceeeeeccccCCCCceEE-------------------EEEccCCCEEEEE-----ecCCcEEEEeccCchhhhhhccccc
Q psy10348 90 ICIAIFGGVEGHRDEVLS-------------------ADFDLLGTKIMSC-----GMDHSLKLWDLTKPEIKDACAESYT 145 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~d~~i~v~d~~~~~~~~~~~~~~~ 145 (291)
+..... ..+...... +.|+|+++.++.+ ..+..|.+||+.+++.....
T Consensus 113 ~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~----- 184 (396)
T 3c5m_A 113 EEQVIY---TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH----- 184 (396)
T ss_dssp CEEEEE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-----
T ss_pred CcEEEE---ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-----
Confidence 765554 223332222 3456666655543 34567888888776532211
Q ss_pred cCCCCccccccCccccCcccccccccCcceeEEEEcC---CEEEEecCC------CeEEEecCCCCCccccccCCCceee
Q psy10348 146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG---DFVLSKSCE------NCIICWKPGRLEDKELRTNETNVTI 216 (291)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~ 216 (291)
.+...+..+.|++ +.|+..+.+ ..|.+||+.....
T Consensus 185 ------------------------~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~------------ 228 (396)
T 3c5m_A 185 ------------------------QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV------------ 228 (396)
T ss_dssp ------------------------EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC------------
T ss_pred ------------------------cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce------------
Confidence 1445577788864 345544432 4688888765432
Q ss_pred eeeecCCcccEEEEEEEecCCCcEEEEEcCC-----CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceee
Q psy10348 217 INRLNFKDCEIWFIRFSMDYWQKILAVGNQS-----GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLL 290 (291)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~ 290 (291)
..+..+..........++|+|++|+.++.+ +.|++||+.+++. .......+ .. ++|+| ||++|+
T Consensus 229 -~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~----~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 229 -RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN----EEVMVMPP----CS-HLMSNFDGSLMV 298 (396)
T ss_dssp -EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE----EEEEECCS----EE-EEEECSSSSEEE
T ss_pred -eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe----EEeeeCCC----CC-CCccCCCCceEE
Confidence 112112112223345677889988777543 4599999988742 12222222 22 89999 999876
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=2.8e-16 Score=126.32 Aligned_cols=219 Identities=10% Similarity=0.002 Sum_probs=139.2
Q ss_pred EEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeE-------------------EEEecCCCcEEEEe
Q psy10348 15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINE-------------------LKFHPQDFNLLLSV 75 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~s~ 75 (291)
.+.|+|++ +.|+.++.++.|++||+.+++.......+...... +.|+| +++.++.+
T Consensus 85 ~~~~spdg----~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~ 159 (396)
T 3c5m_A 85 GGFISTDE----RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFA 159 (396)
T ss_dssp TCEECTTS----SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHH
T ss_pred cceECCCC----CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeee
Confidence 37789988 58988888889999999988766555544332222 34566 55555543
Q ss_pred -----ecCCeEEEEECCCcceeeeeccccCCCCceEEEEEcc-CCCEEEEEecC------CcEEEEeccCchhhhhhccc
Q psy10348 76 -----SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMD------HSLKLWDLTKPEIKDACAES 143 (291)
Q Consensus 76 -----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~ 143 (291)
..+..|.+||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+||+..++......
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~~~----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-- 233 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGELEVIH----QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-- 233 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCEEEEE----EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--
T ss_pred eeccCCCcceEEEEECCCCcEEeec----cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--
Confidence 35668999999987765544 4667889999999 78877766543 358888876544211100
Q ss_pred cccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC-----CeEEEecCCCCCccccccCCCceee
Q psy10348 144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTI 216 (291)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~ 216 (291)
......+..+.|+ |++|+..+.+ +.|.+||+.+++. ..
T Consensus 234 -------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----------~~ 278 (396)
T 3c5m_A 234 -------------------------HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN----------EE 278 (396)
T ss_dssp -------------------------CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE----------EE
T ss_pred -------------------------cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe----------EE
Confidence 0012347778888 6666665443 5599999987653 11
Q ss_pred eeeecCCcccEEEEEEEecC-CCcEEEEEc----------------CCCcEEEEEcCCCCCCcceeEEEecccc------
Q psy10348 217 INRLNFKDCEIWFIRFSMDY-WQKILAVGN----------------QSGRTYVWDLDVQDPSSIKFQILSHPRC------ 273 (291)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~~-~~~~l~~~~----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~------ 273 (291)
+..+.. .. ..++| +|++++.++ .++.|++||+.+++.. ........
T Consensus 279 l~~~~~----~~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~ 347 (396)
T 3c5m_A 279 VMVMPP----CS---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ----KLCKHSTSWDVLDG 347 (396)
T ss_dssp EEECCS----EE---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC----EEEECCCCCCCBTT
T ss_pred eeeCCC----CC---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE----EccCCCCccccccc
Confidence 222221 11 34556 799888754 3478999999887531 22221110
Q ss_pred --ccceeeeEEccCCceee
Q psy10348 274 --MSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 274 --~~~v~~~~~s~~g~~l~ 290 (291)
...+..++|+|||+.|+
T Consensus 348 ~~~~~~~~~~~s~dg~~l~ 366 (396)
T 3c5m_A 348 DRQITHPHPSFTPNDDGVL 366 (396)
T ss_dssp BSSTTCCCCEECTTSSEEE
T ss_pred cccCCCCCceEccCCCeEE
Confidence 00256789999999876
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=8.6e-16 Score=131.76 Aligned_cols=230 Identities=8% Similarity=-0.067 Sum_probs=146.8
Q ss_pred eecceeEEEEeeeccCCCCCEEEEe--cCCCeEEEEccCCcceeEEEeeecccee---------EEEEe--cCCCcE-EE
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVA--GSRAVIRIFSPAFHACVRHFYGHGHAIN---------ELKFH--PQDFNL-LL 73 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~--~~dg~i~vw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~-l~ 73 (291)
.|...+..++|+++. -+++.. +.++...||....+...+.+..|...+. ...|+ | |++. |+
T Consensus 21 ~~~~~~~~~~~s~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la 95 (662)
T 3azo_A 21 SRSGRPACVGAVGDE----VWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLV 95 (662)
T ss_dssp HTCSCCEEEEEETTE----EEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEE
T ss_pred hcCCccceeEEcCCe----EEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEE
Confidence 357789999999876 356666 5678999998655555566666666666 66676 8 7777 66
Q ss_pred Eeec-CCeEEEEECC--C-cceeeeeccccC-----CCCceEEEEEccCCCEEEEEecC----------CcEEEEeccC-
Q psy10348 74 SVSK-DHTLRLWNIK--T-DICIAIFGGVEG-----HRDEVLSADFDLLGTKIMSCGMD----------HSLKLWDLTK- 133 (291)
Q Consensus 74 s~~~-dg~i~vwd~~--~-~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------~~i~v~d~~~- 133 (291)
.++. +..|.++++. . +. ...+ .. |...+..++|+|+|+.|++++.| ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l---~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPL---TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEEC---SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEec---cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 5543 5667777765 2 33 3344 23 67788999999999999998877 5899999987
Q ss_pred -----chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC--------CeEEEec
Q psy10348 134 -----PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE--------NCIICWK 198 (291)
Q Consensus 134 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d--------~~i~iwd 198 (291)
++..... ..+...+..++|+ |++|+..+.+ ..|.+||
T Consensus 172 ~~~~~~~~~~l~----------------------------~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d 223 (662)
T 3azo_A 172 AAADRSAVRELS----------------------------DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTAR 223 (662)
T ss_dssp TTTCGGGSEESS----------------------------CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEE
T ss_pred ccccCCceeEEE----------------------------ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEE
Confidence 4422111 0134567778888 7788776644 4899999
Q ss_pred CC-CCCccccccCCCceeeeeee-cCCcccEEEEEEEecCCCcEEEEEcCCC--cEEEEEcCCCCCCcceeEEEecccc-
Q psy10348 199 PG-RLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYWQKILAVGNQSG--RTYVWDLDVQDPSSIKFQILSHPRC- 273 (291)
Q Consensus 199 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~- 273 (291)
+. ++.. .....+ ..+...+.. ..++|||+++++++.++ .|.+||+.+++. ..+......
T Consensus 224 ~~~~g~~----------~~~~~l~~~~~~~~~~--~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~----~~l~~~~~~~ 287 (662)
T 3azo_A 224 VTEDGRF----------ADTRTLLGGPEEAIAQ--AEWAPDGSLIVATDRTGWWNLHRVDPATGAA----TQLCRREEEF 287 (662)
T ss_dssp ECTTSCE----------EEEEEEEEETTBCEEE--EEECTTSCEEEEECTTSSCEEEEECTTTCCE----EESSCCSSBS
T ss_pred ECCCCcc----------cccEEeCCCCCceEcc--eEECCCCeEEEEECCCCCeEEEEEECCCCce----eecccccccc
Confidence 87 4411 012222 222344444 45667799888888888 566666555531 111111100
Q ss_pred -----ccceeeeEEccCCceee
Q psy10348 274 -----MSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 274 -----~~~v~~~~~s~~g~~l~ 290 (291)
.-.+.+++|+|++++++
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEE
T ss_pred cCccccccCceEeEeCCCEEEE
Confidence 01156789999998775
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1.3e-14 Score=111.47 Aligned_cols=201 Identities=12% Similarity=0.101 Sum_probs=135.6
Q ss_pred ceeEEEEee-eccCCCCCEEEEecC-CCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 11 ENFYTCAWS-MDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 11 ~~i~~~~~s-~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
..+.++++. +++ .++++... ++.|++|| .+++.+..+.. +...+..+++.| +++++++...++.|.+||..
T Consensus 77 ~~p~~i~~~~~~g----~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 77 LYPNRVAVVRNSG----DIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp SSEEEEEEETTTT----EEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred cCceEEEEEcCCC----eEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC
Confidence 457788884 555 35555533 88999999 56777766642 335688999999 88888887788999999965
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
++.+..+.. ..+...+..++++++|+++++...++.|++||... +.+..+..
T Consensus 151 -g~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~------------------------- 202 (286)
T 1q7f_A 151 -GNVLHKFGC-SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGG------------------------- 202 (286)
T ss_dssp -SCEEEEEEC-TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESC-------------------------
T ss_pred -CCEEEEeCC-CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEcc-------------------------
Confidence 565555521 23456789999999998878777899999999743 32222110
Q ss_pred ccccCcceeEEEEc--CCEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 168 RDIHRNYVDCVRWL--GDFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
.++...+..++++ ++++++...++ .|.+||... +. +..+..+........++++|+|+++++
T Consensus 203 -~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~------------~~~~~~~~~~~~~~~i~~~~~g~l~vs- 267 (286)
T 1q7f_A 203 -EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QL------------ISALESKVKHAQCFDVALMDDGSVVLA- 267 (286)
T ss_dssp -TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CE------------EEEEEESSCCSCEEEEEEETTTEEEEE-
T ss_pred -CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CE------------EEEEcccCCCCcceeEEECCCCcEEEE-
Confidence 1123457788887 66777777775 999999643 22 333333222212234555677987776
Q ss_pred cCCCcEEEEEcCCCCC
Q psy10348 245 NQSGRTYVWDLDVQDP 260 (291)
Q Consensus 245 ~~dg~i~vwd~~~~~~ 260 (291)
+.|+.|++|++....+
T Consensus 268 ~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 268 SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp ETTTEEEEEECSCCCC
T ss_pred CCCCeEEEEEcccccc
Confidence 5689999999876543
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=2.3e-15 Score=129.16 Aligned_cols=222 Identities=13% Similarity=0.060 Sum_probs=138.7
Q ss_pred EEEee--eccCCCCCE-EEEec-CCCeEEEEccC--C-cceeEEEee-----eccceeEEEEecCCCcEEEEeecC----
Q psy10348 15 TCAWS--MDLESGRPL-LAVAG-SRAVIRIFSPA--F-HACVRHFYG-----HGHAINELKFHPQDFNLLLSVSKD---- 78 (291)
Q Consensus 15 ~~~~s--~~~~~~~~~-l~~~~-~dg~i~vw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~d---- 78 (291)
...|+ ||+. . |+.++ .+..|.++++. . ++ ...+.. |...+..++|+| +++.|+.++.+
T Consensus 81 ~~~~~~SPDg~----~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~ 154 (662)
T 3azo_A 81 PWAGVPRPAGG----PLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGE 154 (662)
T ss_dssp CEEEECCSSSS----CEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSS
T ss_pred cceeeeecCCC----eEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCC
Confidence 45565 8884 5 55444 46778888876 3 43 445554 567789999999 89999988876
Q ss_pred ------CeEEEEECCC------cceeeeecccc-CCCCceEEEEEccCCCEEEEEecCC--------cEEEEecc-Cch-
Q psy10348 79 ------HTLRLWNIKT------DICIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGMDH--------SLKLWDLT-KPE- 135 (291)
Q Consensus 79 ------g~i~vwd~~~------~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~--------~i~v~d~~-~~~- 135 (291)
..|++||+.+ ++. ..+ . .+...+..++|+|||++|+.++.++ .|++||+. ++.
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~l---~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 155 GPSDVRRFLAAVPLDGSAAADRSAV-REL---SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp STTCEEEEEEEEETTSTTTTCGGGS-EES---SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred CCCCceeEEEEEECCCCccccCCce-eEE---EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 5899999987 443 344 4 5567888899999999999887653 79999998 451
Q ss_pred -hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC--eEEEecCCCCCccccccC
Q psy10348 136 -IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN--CIICWKPGRLEDKELRTN 210 (291)
Q Consensus 136 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~ 210 (291)
....+. ..|...+..+.|+ |++++++..++ .|.+||+.+++...+...
T Consensus 231 ~~~~~l~---------------------------~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 231 ADTRTLL---------------------------GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEEEEE---------------------------EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred cccEEeC---------------------------CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence 111111 1245678889998 66778888888 677777655543211111
Q ss_pred CCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEE--EcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348 211 ETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVW--DLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV 288 (291)
Q Consensus 211 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 288 (291)
..... -..+.. .+ ..++++|+++++++++. +.++|| |+.+++ ...+ ..+...+..+ |++++..
T Consensus 284 ~~~~~-~p~w~~---~~--~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-----~~~l--~~~~~~~~~~-~s~~~~~ 348 (662)
T 3azo_A 284 EEEFA-GPLWTP---GM--RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-----LVDA--AGPWTEWAAT-LTVSGTR 348 (662)
T ss_dssp SSBSS-CCCCST---TC--CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-----EEEC--CSSCCEEEEE-EEEETTE
T ss_pred ccccc-Cccccc---cC--ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-----EEEe--cCCCCeEEEE-EecCCCE
Confidence 00000 000000 01 13556678999999998 999999 444432 1222 2345566655 1444443
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=6.9e-15 Score=116.14 Aligned_cols=206 Identities=13% Similarity=0.035 Sum_probs=131.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCC---C--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-------
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSR---A--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD------- 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~d---g--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------- 78 (291)
..+..++|||++. .||..+.+ + .|.+|++.+++....... .. +..++|+| +++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~----~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISPDGK----KIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNE-DSRKLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECTTSS----EEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECT-TSSEEEEEEECCCC----
T ss_pred ccCCCeEECCCCC----EEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECC-CCCEEEEEEccCCCcCCc
Confidence 4567889999984 78777643 2 488889888776554443 34 99999999 88888877642
Q ss_pred --------------------CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-------cEEEEec
Q psy10348 79 --------------------HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-------SLKLWDL 131 (291)
Q Consensus 79 --------------------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~v~d~ 131 (291)
..|.+||+.+++.+..+ .. . .+..+.|+|+| +++++..++ ...+|.+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l---~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF---EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEE---EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeee---cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEe
Confidence 56999999888764555 23 3 78899999999 777776542 4455555
Q ss_pred cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCC--------CeEEEecCCCCC
Q psy10348 132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCE--------NCIICWKPGRLE 203 (291)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~ 203 (291)
.+++. ..+. .+ ..+..+.-+|++|+..+.+ ..|.+|| +++
T Consensus 206 d~~~~-~~l~----------------------------~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~ 253 (347)
T 2gop_A 206 EDGKE-EKMF----------------------------EK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE 253 (347)
T ss_dssp ETTEE-EEEE----------------------------EE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC
T ss_pred CCCce-EEec----------------------------cC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc
Confidence 43321 1111 02 2233343347777665543 4788888 332
Q ss_pred ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc
Q psy10348 204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS 283 (291)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 283 (291)
. ......+...+.. ...++ ++ ++++++.++.+++| +.+++ ..... .+.+.|.+++|+
T Consensus 254 ~------------~~l~~~~~~~~~~-~~~~s-dg-~~~~~~~~~~~~l~-~~~g~----~~~~~---~~~~~v~~~~~s 310 (347)
T 2gop_A 254 V------------MGILDEVDRGVGQ-AKIKD-GK-VYFTLFEEGSVNLY-IWDGE----IKPIA---KGRHWIMGFDVD 310 (347)
T ss_dssp E------------EESSTTCCSEEEE-EEEET-TE-EEEEEEETTEEEEE-EESSS----EEEEE---CSSSEEEEEEES
T ss_pred e------------EeccccCCcccCC-ccEEc-Cc-EEEEEecCCcEEEE-EcCCc----eEEEe---cCCCeEEeeeee
Confidence 2 2222233344442 13455 67 88999999999999 87432 22222 235688999999
Q ss_pred c
Q psy10348 284 K 284 (291)
Q Consensus 284 ~ 284 (291)
|
T Consensus 311 ~ 311 (347)
T 2gop_A 311 E 311 (347)
T ss_dssp S
T ss_pred C
Confidence 9
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=3.3e-14 Score=108.20 Aligned_cols=222 Identities=6% Similarity=-0.058 Sum_probs=142.8
Q ss_pred eeEEEEeeeccCCCCCEEE-EecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 12 NFYTCAWSMDLESGRPLLA-VAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~-~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
...++++++++ .+++ +...++.|.+|+..++........+...+.++++.+ ++.++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g----~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAG----NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTC----CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCC----CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCce
Confidence 67789999887 4676 557789999999765543221122335678999999 777666655 8899999987544
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
. ..+. ......+..++++++|+.+++...++.|.+|+..+....... ..
T Consensus 99 ~-~~~~--~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~----------------------------~~ 147 (270)
T 1rwi_B 99 Q-TVLP--FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP----------------------------FT 147 (270)
T ss_dssp C-EECC--CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC----------------------------CC
T ss_pred E-eeee--cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec----------------------------cc
Confidence 3 3331 223367899999999987777777889999975543321100 01
Q ss_pred cCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCC
Q psy10348 171 HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248 (291)
Q Consensus 171 ~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 248 (291)
....+..++++ ++++++...++.|.+||....... ........... .++++++|.++++...++
T Consensus 148 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~------------~~~~~~~~~p~--~i~~d~~g~l~v~~~~~~ 213 (270)
T 1rwi_B 148 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV------------VLPFTDITAPW--GIAVDEAGTVYVTEHNTN 213 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE------------ECCCSSCCSEE--EEEECTTCCEEEEETTTS
T ss_pred cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE------------eecccCCCCce--EEEECCCCCEEEEECCCC
Confidence 22345677887 666666666889999998765321 11111112233 456677788778777889
Q ss_pred cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 249 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.|.+|+...... .... ..+...+.+++++++|++++
T Consensus 214 ~v~~~~~~~~~~-----~~~~-~~~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 214 QVVKLLAGSTTS-----TVLP-FTGLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp CEEEECTTCSCC-----EECC-CCSCSCEEEEEECTTCCEEE
T ss_pred cEEEEcCCCCcc-----eeec-cCCCCCceeEEECCCCCEEE
Confidence 999999876532 1111 12235688999999998665
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=6.3e-16 Score=134.10 Aligned_cols=192 Identities=14% Similarity=0.096 Sum_probs=127.2
Q ss_pred ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCc-----eEEEEEccCCCEEEEEecC---------
Q psy10348 58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDE-----VLSADFDLLGTKIMSCGMD--------- 123 (291)
Q Consensus 58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~d--------- 123 (291)
....+.|+| ++.+++++ |+.|++||+.+++....+ .+|... ...+.|||||++|+.++.+
T Consensus 18 ~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 18 KLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFL---ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEE---CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEE---echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 456899999 88888886 899999999999887766 455432 3457899999999998876
Q ss_pred CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348 124 HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR 201 (291)
Q Consensus 124 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~ 201 (291)
+.+.+||+.+++.... ..|...+...+|+ |+.|+.+ .|+.|.+|++.+
T Consensus 92 ~~~~~~d~~~~~~~~l-----------------------------~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~ 141 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITE-----------------------------ERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN 141 (740)
T ss_dssp EEEEEEETTTTEECCS-----------------------------SCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred eEEEEEECCCCcEEEc-----------------------------ccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCC
Confidence 5667999998874321 1256678899998 7788777 478999999987
Q ss_pred CCccccccCCCceeeeeeecCCcccE-------EEEEEEecCCCcEEEEEcCCC--------------------------
Q psy10348 202 LEDKELRTNETNVTIINRLNFKDCEI-------WFIRFSMDYWQKILAVGNQSG-------------------------- 248 (291)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~~~~~~~l~~~~~dg-------------------------- 248 (291)
+....+........ .+.++...+ ....+.++|||++||.++.|.
T Consensus 142 ~~~~~lt~~g~~~~---~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y 218 (740)
T 4a5s_A 142 LPSYRITWTGKEDI---IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY 218 (740)
T ss_dssp SCCEECCSCCBTTT---EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred CceEEEcCCCCccc---eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence 75432211110000 001100000 001256778899999875332
Q ss_pred ----------cEEEEEcCC---CCCCcceeEEEecc----ccccceeeeEEccCCceee
Q psy10348 249 ----------RTYVWDLDV---QDPSSIKFQILSHP----RCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 249 ----------~i~vwd~~~---~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~ 290 (291)
.|++||+.+ ++... ...+..+ ++...+..++|||||+.++
T Consensus 219 p~~G~~~~~~~l~v~d~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 219 PKAGAVNPTVKFFVVNTDSLSSVTNAT--SIQITAPASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp CBTTSCCCEEEEEEEETTSCCSSSCCC--EEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred CCCcCcCCeeEEEEEECCCCCCCCcce--EEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence 477888887 63211 1122211 3667899999999999654
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.68 E-value=5.4e-14 Score=110.14 Aligned_cols=221 Identities=10% Similarity=-0.056 Sum_probs=143.1
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC 91 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 91 (291)
....+.+..+ +++++...++.|.+||..+++.+..+. .......+++++ ++.++++...++.|.+||..+++.
T Consensus 45 ~~~~i~~~~~-----~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 45 VAQSMVIRDG-----IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp CEEEEEEETT-----EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEE
T ss_pred cceEEEEECC-----EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeE
Confidence 3456666432 467777778999999999999988885 346678999988 776555554789999999999887
Q ss_pred eeeecccc--CCCCceEEEEEccCCCEEEEEe--cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 92 IAIFGGVE--GHRDEVLSADFDLLGTKIMSCG--MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 92 ~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
...+..-. +.......+++ ++..++.+. .++.|.++|+.+++....+..
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~------------------------- 170 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI------------------------- 170 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-------------------------
T ss_pred EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-------------------------
Confidence 76653100 01114556777 345555554 488999999998876654431
Q ss_pred ccccCcceeEEEEc--CCEEEEecCC----------CeEEEecCCCCCccccccCCCceeeeeeecCCc-ccEEEEEEEe
Q psy10348 168 RDIHRNYVDCVRWL--GDFVLSKSCE----------NCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEIWFIRFSM 234 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~ 234 (291)
......+.++ |++++++..+ +.|.++|..+.+. ...+.... .... .+++
T Consensus 171 ----g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v------------~~~~~~~~g~~p~--~la~ 232 (328)
T 3dsm_A 171 ----GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV------------EKQFKFKLGDWPS--EVQL 232 (328)
T ss_dssp ----SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE------------EEEEECCTTCCCE--EEEE
T ss_pred ----CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE------------EEEEecCCCCCce--eEEE
Confidence 1112355665 5555555544 7899999887643 33433221 1223 4566
Q ss_pred cCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccC-Cceee
Q psy10348 235 DYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKN-GNVLL 290 (291)
Q Consensus 235 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~ 290 (291)
+|++++|+++.. .|.+||..+++..... .+. ........++++|+ +.+.+
T Consensus 233 ~~d~~~lyv~~~--~v~~~d~~t~~~~~~~--~~~--~~~~~p~gi~vdp~~g~lyv 283 (328)
T 3dsm_A 233 NGTRDTLYWINN--DIWRMPVEADRVPVRP--FLE--FRDTKYYGLTVNPNNGEVYV 283 (328)
T ss_dssp CTTSCEEEEESS--SEEEEETTCSSCCSSC--SBC--CCSSCEEEEEECTTTCCEEE
T ss_pred ecCCCEEEEEcc--EEEEEECCCCceeeee--eec--CCCCceEEEEEcCCCCeEEE
Confidence 677999988765 8999999887642111 111 11356788999994 44443
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=1.9e-14 Score=112.98 Aligned_cols=228 Identities=11% Similarity=0.000 Sum_probs=149.7
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
...+.+++|+++.. .++..+.++.++.| .++....+..+...+.+++|++ ++++++++..++.|.+||..++
T Consensus 5 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~ 76 (333)
T 2dg1_A 5 QQDLPTLFYSGKSN----SAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETK 76 (333)
T ss_dssp -CCCCBCCSCGGGG----CSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTC
T ss_pred ccccceeeecCCcc----ceeEEeecccCccc---ccceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCC
Confidence 45578889999874 66666778899999 3556666776777789999999 8888888888999999999887
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+..... ..+...+.+++++++|+++++...+ +.|.+||..++.....+..
T Consensus 77 ~~~~~~---~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~----------------------- 130 (333)
T 2dg1_A 77 EIKRPF---VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED----------------------- 130 (333)
T ss_dssp CEEEEE---ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-----------------------
T ss_pred cEEEEe---eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-----------------------
Confidence 765543 2456789999999999888777666 6899999887653211100
Q ss_pred ccccccCcceeEEEEc--CCEEEEecC------CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCC
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSC------ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYW 237 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (291)
..+...+..+.++ ++++++... .+.|..+|....+. ..+........ .++++|+
T Consensus 131 ---~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~--~i~~~~d 192 (333)
T 2dg1_A 131 ---LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-------------TPIIQNISVAN--GIALSTD 192 (333)
T ss_dssp ---SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-------------EEEEEEESSEE--EEEECTT
T ss_pred ---CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-------------EEeecCCCccc--ceEECCC
Confidence 0123457788887 555555443 35677777654332 11111111222 3556788
Q ss_pred CcEEEE-EcCCCcEEEEEcCC-CCCCccee-E-EEeccccccceeeeEEccCCceee
Q psy10348 238 QKILAV-GNQSGRTYVWDLDV-QDPSSIKF-Q-ILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 238 ~~~l~~-~~~dg~i~vwd~~~-~~~~~~~~-~-~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+++|++ .+.++.|.+|++.+ +....... . .....++ ..+..++++++|++++
T Consensus 193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v 248 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYV 248 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEE
T ss_pred CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEE
Confidence 986654 45678999999964 32211110 1 1111122 4678899999998765
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=7.5e-14 Score=109.35 Aligned_cols=208 Identities=13% Similarity=0.089 Sum_probs=137.7
Q ss_pred CCCeEEEEccCCcceeEEEe------eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348 34 SRAVIRIFSPAFHACVRHFY------GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107 (291)
Q Consensus 34 ~dg~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~ 107 (291)
.++.|.++|.++++....+. ........+.+. ++.++++...++.|.+||..+++.+..+ . .......
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i---~-~~~~p~~ 88 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI---T-GFTSPRY 88 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE---E-CCSSEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc---C-CCCCCcE
Confidence 37999999999988765441 112345677775 4567777777899999999999988887 2 3467889
Q ss_pred EEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEE
Q psy10348 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLS 187 (291)
Q Consensus 108 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 187 (291)
++++++++.+++...++.|.+||+.+++....+..... .+.......+++.++.++.
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-----------------------~~~~~~p~~i~~~~~~lyv 145 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-----------------------DMESGSTEQMVQYGKYVYV 145 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-----------------------CTTTCBCCCEEEETTEEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-----------------------cccCCCcceEEEECCEEEE
Confidence 99999985444443799999999998876544331000 0011133455556555555
Q ss_pred ec--CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----------CcEEEEEc
Q psy10348 188 KS--CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----------GRTYVWDL 255 (291)
Q Consensus 188 ~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----------g~i~vwd~ 255 (291)
+. .++.|.++|+.+.+. +..+.....+ ..+.++|+|++++++..+ +.|.++|.
T Consensus 146 ~~~~~~~~v~viD~~t~~~------------~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETDKV------------VDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp EECTTCCEEEEEETTTTEE------------EEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred EcCCCCCEEEEEECCCCeE------------EEEEEcCCCc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence 54 489999999988743 3333322221 134556889877777654 78999999
Q ss_pred CCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 256 DVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.+++ ....+... ....+..++|+||+++|.
T Consensus 211 ~t~~----v~~~~~~~-~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 211 ETFT----VEKQFKFK-LGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp TTTE----EEEEEECC-TTCCCEEEEECTTSCEEE
T ss_pred CCCe----EEEEEecC-CCCCceeEEEecCCCEEE
Confidence 8874 22233321 123688999999998774
No 186
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.64 E-value=2.7e-13 Score=117.72 Aligned_cols=225 Identities=11% Similarity=-0.034 Sum_probs=139.2
Q ss_pred eeEEEEeeeccCCCCCEEEEecCC-----CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCe------
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSR-----AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT------ 80 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~------ 80 (291)
.+..++||||++ +||.+..+ ..|++||+++++.+.. ..+...+..++|+| + +.|+.++.++.
T Consensus 164 ~~~~~~~SPDG~----~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 164 ALDAWAASDDGR----LLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEEECTTSS----EEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC------
T ss_pred EEEeEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEEC-C-CEEEEEEecCccccccc
Confidence 678899999984 77776543 4699999999987653 22233346889999 7 77777766543
Q ss_pred --------EEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEecCC-----cEEEEeccCc--hhhhhhccc
Q psy10348 81 --------LRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-----SLKLWDLTKP--EIKDACAES 143 (291)
Q Consensus 81 --------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~--~~~~~~~~~ 143 (291)
|++|++.++.. ...+. ...+...+..+.|+|+|++|+..+.++ .|++||+.++ +....+.
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-- 313 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFA-TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-- 313 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--
T ss_pred ccCCCCCEEEEEECCCCchhCEEEec-cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--
Confidence 89999977652 22221 123444688999999999988877654 7999999876 2011111
Q ss_pred cccCCCCccccccCccccCcccccccccCcceeEEEE-cCCEEEEecC----CCeEEEecCCCCCccccccCCCceeeee
Q psy10348 144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW-LGDFVLSKSC----ENCIICWKPGRLEDKELRTNETNVTIIN 218 (291)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 218 (291)
.+...+....+ +++.|+..+. ++.|.+||+.+.. . ....
T Consensus 314 --------------------------~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~---------~~~~ 357 (741)
T 1yr2_A 314 --------------------------PDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-P---------RFDT 357 (741)
T ss_dssp --------------------------CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-C---------EEEE
T ss_pred --------------------------CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-c---------ccEE
Confidence 01111222222 3776666554 4569999987642 0 1112
Q ss_pred eecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcC-CCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 219 RLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD-VQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 219 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.+..+...+.. ++++ ++.++++...|+..+||.+. +++ ....+.. ...+.+..++++|+++.|+
T Consensus 358 l~~~~~~~l~~--~~~~-~~~lv~~~~~dg~~~l~~~~~~g~----~~~~l~~-~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 358 VVPESKDNLES--VGIA-GNRLFASYIHDAKSQVLAFDLDGK----PAGAVSL-PGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EECCCSSEEEE--EEEE-BTEEEEEEEETTEEEEEEEETTSC----EEEECBC-SSSCEEEEEECCBTCSCEE
T ss_pred EecCCCCeEEE--EEEE-CCEEEEEEEECCEEEEEEEeCCCC----ceeeccC-CCCeEEEEeecCCCCCEEE
Confidence 22223333333 3443 36788888899988877665 232 1222322 2346788999999988664
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=2.3e-13 Score=106.63 Aligned_cols=202 Identities=7% Similarity=-0.045 Sum_probs=139.1
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEe---------eeccceeEEEEecCCCcEEEEee-cCCe
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFY---------GHGHAINELKFHPQDFNLLLSVS-KDHT 80 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~l~s~~-~dg~ 80 (291)
....++++|++ .++++...++.|++|+.+... .+..+. .+-.....++++|.++.++++.+ .++.
T Consensus 92 ~p~gia~d~~g----~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 92 LPHGLSIDTDG----NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp SEEEEEECTTS----CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CceEEEECCCC----CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 56788999888 488888889999999986442 555552 33346889999985677777775 6899
Q ss_pred EEEEECCCcceeeeeccc-------cCCCCceEEEEEccC-CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348 81 LRLWNIKTDICIAIFGGV-------EGHRDEVLSADFDLL-GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST 152 (291)
Q Consensus 81 i~vwd~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
|++|| .+++.+..+... .++-.....++++|+ +.++++...++.|++||..+++.+..+..
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~---------- 236 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH---------- 236 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC----------
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec----------
Confidence 99999 557777666210 012234889999998 66667777789999999987776554321
Q ss_pred ccccCccccCcccccccccCcceeEEEEc--------CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec---
Q psy10348 153 RPFDTQKEHFPQFSTRDIHRNYVDCVRWL--------GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN--- 221 (291)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--- 221 (291)
..+...+..++|. ++..++...+..|.+||..+++. +..+.
T Consensus 237 ----------------~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~------------~~~~~~~~ 288 (329)
T 3fvz_A 237 ----------------ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI------------IDVFKPVR 288 (329)
T ss_dssp ----------------TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE------------EEEECCSS
T ss_pred ----------------cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE------------EEEEcCCC
Confidence 0123334455554 33334444566899999887754 44442
Q ss_pred CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348 222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 258 (291)
.+...... ++++|+|.++++...++.|++|++...
T Consensus 289 ~~~~~p~~--ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 289 KHFDMPHD--IVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SCCSSEEE--EEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CccCCeeE--EEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 33333444 455678988888889999999998753
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=8.2e-13 Score=110.24 Aligned_cols=196 Identities=10% Similarity=0.054 Sum_probs=138.0
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECC--CcceeeeeccccCCCCc
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK--TDICIAIFGGVEGHRDE 104 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~ 104 (291)
.++++...++.|.++|..+++.+..+.. ...+..+.|+| +++++++++.|+.|.+||+. +++.+..+ .. ...
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i---~~-G~~ 241 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEI---KI-GSE 241 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEE---EC-CSE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEE---ec-CCC
Confidence 4777778899999999999999988874 34567899999 99999999999999999995 77777766 22 345
Q ss_pred eEEEEEc----cCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc-ceeEE
Q psy10348 105 VLSADFD----LLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN-YVDCV 178 (291)
Q Consensus 105 i~~~~~~----~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~ 178 (291)
...++|+ |+|++++++.. ++.+.++|..+.+.+..+...-. .......|.. .+..+
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~------------------~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM------------------TYDEQEYHPEPRVAAI 303 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEE------------------CTTTCCEESCCCEEEE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccc------------------ccccccccCCCceEEE
Confidence 6899999 69998887766 69999999988887665431000 0000001222 45566
Q ss_pred EEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEE
Q psy10348 179 RWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWD 254 (291)
Q Consensus 179 ~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd 254 (291)
..+ ..+++....+|.|.++|....... .+..+.... . .-.+.++|++++++++. .+++|.++|
T Consensus 304 ~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~----------~v~~i~~~~-~--~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 304 LASHYRPEFIVNVKETGKILLVDYTDLNNL----------KTTEISAER-F--LHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp EECSSSSEEEEEETTTTEEEEEETTCSSEE----------EEEEEECCS-S--EEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEecCCCccc----------eeeeeeccc-c--ccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 655 336666677899999998765421 122222111 1 12356778899987765 678999999
Q ss_pred cCCCC
Q psy10348 255 LDVQD 259 (291)
Q Consensus 255 ~~~~~ 259 (291)
+.+++
T Consensus 371 ~~t~k 375 (567)
T 1qks_A 371 TKEGK 375 (567)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 99885
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.62 E-value=2.4e-14 Score=112.99 Aligned_cols=175 Identities=13% Similarity=0.036 Sum_probs=124.9
Q ss_pred ceeEEEEecCCCcEEEEeecCCeEEEEECCCcc---------eee-eeccccCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348 58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI---------CIA-IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLK 127 (291)
Q Consensus 58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---------~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 127 (291)
++..+++++ ...++++|+.++ +.+|+++..+ ... .. ..+.. |+.++| ++.+|+++ .++.|+
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~---~~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE---KEIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE---EECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE---eeCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 689999999 888999999875 6669876443 111 11 23556 999999 88999998 889999
Q ss_pred EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCcccc
Q psy10348 128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKEL 207 (291)
Q Consensus 128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (291)
+||+++....... ..|...+..+.+....+++++.||.|.+||+......
T Consensus 110 v~dv~sl~~~~~~----------------------------~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~-- 159 (388)
T 1xip_A 110 SLDLEELSEFRTV----------------------------TSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTK-- 159 (388)
T ss_dssp EEESSSTTCEEEE----------------------------EECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE--
T ss_pred EEEchhhhccCcc----------------------------ceeecceeeEEecCCCEEEEECCCCEEEEEccCCccc--
Confidence 9999876532221 1255567777777545888899999999999876431
Q ss_pred ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEE-------eccccccceeee
Q psy10348 208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQIL-------SHPRCMSAVRQT 280 (291)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~v~~~ 280 (291)
. ....+. +++|+|+| ++.|..||++++|+....+.. ....+ .+.+|...|.++
T Consensus 160 ----------~----~~~~Vs--~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~--~k~~I~~Pp~~~~~~~~~~~V~sI 219 (388)
T 1xip_A 160 ----------Q----LAQNVT--SFDVTNSQ--LAVLLKDRSFQSFAWRNGEME--KQFEFSLPSELEELPVEEYSPLSV 219 (388)
T ss_dssp ----------E----EEESEE--EEEECSSE--EEEEETTSCEEEEEEETTEEE--EEEEECCCHHHHTSCTTTSEEEEE
T ss_pred ----------c----ccCCce--EEEEcCCc--eEEEEcCCcEEEEcCCCcccc--ccceecCCcccccccCCCeeEEEE
Confidence 1 122344 56666778 788999999999988776310 02233 112467899999
Q ss_pred EEccCCceeeC
Q psy10348 281 TLSKNGNVLLC 291 (291)
Q Consensus 281 ~~s~~g~~l~s 291 (291)
.|.+++++|++
T Consensus 220 ~wl~~~~flv~ 230 (388)
T 1xip_A 220 TILSPQDFLAV 230 (388)
T ss_dssp EESSSSEEEEE
T ss_pred EEecCCeEEEE
Confidence 99999999874
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=3e-12 Score=98.67 Aligned_cols=224 Identities=7% Similarity=-0.069 Sum_probs=149.3
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE-eeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
...+.++++.+++ .++++...++.|.+||.. ++..... ..+...+..+++.+ ++.++++...++.|..||..
T Consensus 14 ~~~~~~i~~d~~g----~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 14 DTGPYGITVSDKG----KVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp SCCEEEEEECTTS----CEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred CCCccceEECCCC----CEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-
Confidence 4678999999988 477766667899999988 5543222 22346789999999 88888877778899999986
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
++. ..+. +......+..+++.+++.++++...++.|..||. +++......
T Consensus 87 g~~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~--------------------------- 136 (299)
T 2z2n_A 87 GII-KEYT-LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL--------------------------- 136 (299)
T ss_dssp SCE-EEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC---------------------------
T ss_pred CcE-EEEe-CCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC---------------------------
Confidence 433 2221 1234567899999999988887777889999998 443221000
Q ss_pred cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348 169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ 246 (291)
Q Consensus 169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 246 (291)
......+..++++ +++.++...++.|..||. +++.. ..........+. .++.++++.+.++...
T Consensus 137 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~~--~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 137 PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT-----------EFKIPTPASGPV--GITKGNDDALWFVEII 202 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCEE--EEEECTTSSEEEEETT
T ss_pred CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE-----------EeeCCCCCCcce--eEEECCCCCEEEEccC
Confidence 0123346788887 556666666789999998 44321 111111222233 4566777887777777
Q ss_pred CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
++.|.+||. +++. ..+........+.+++++++|+..+
T Consensus 203 ~~~i~~~~~-~g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 203 GNKIGRITT-SGEI-----TEFKIPTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp TTEEEEECT-TCCE-----EEEECSSTTCCEEEEEECSTTCEEE
T ss_pred CceEEEECC-CCcE-----EEEECCCCCCCceeEEECCCCCEEE
Confidence 889999998 5531 2222233446788999999998665
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=2.3e-13 Score=107.45 Aligned_cols=207 Identities=12% Similarity=0.084 Sum_probs=127.1
Q ss_pred ecceeEEEEeeeccCCCCCEEEEec---------CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAG---------SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD- 78 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~---------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d- 78 (291)
.-..+...++ ++ +.++... .++.|.+||+.+++.. .+ ..+..++|+| +++.|+.++.+
T Consensus 13 ~~~~~~~~~~--dG----~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~Sp-Dg~~la~~~~~~ 80 (347)
T 2gop_A 13 KFAYLSDPRT--KG----ELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISP-DGKKIAFMRANE 80 (347)
T ss_dssp CSCEEEEEEE--ET----TEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECT-TSSEEEEEEEET
T ss_pred eeEEcccceE--CC----cEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECC-CCCEEEEEEecc
Confidence 3456677777 66 4666542 2678999999887653 33 5678899999 88888877654
Q ss_pred --C--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC---------------------------CcEE
Q psy10348 79 --H--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD---------------------------HSLK 127 (291)
Q Consensus 79 --g--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------~~i~ 127 (291)
+ .|.+||+.+++..... .+.. +..+.|+|+|+.|+.++.+ ..|.
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~----~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKIL----EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEE----EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred CCCcceEEEEECCCCceEEEE----cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 3 3788888877765544 2233 9999999999988887643 4688
Q ss_pred EEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCC-EEEEecCCC-------eEEEecC
Q psy10348 128 LWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGD-FVLSKSCEN-------CIICWKP 199 (291)
Q Consensus 128 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~-------~i~iwd~ 199 (291)
+||+.+++.+..+. . . .+..+.|+++ +++++..+. ...+|.+
T Consensus 156 ~~d~~~~~~~~~l~----------------------------~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 156 IFDTESEEVIEEFE----------------------------K-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp EEETTTTEEEEEEE----------------------------E-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEE
T ss_pred EEECCCCeEEeeec----------------------------C-C-CcccccCCCCeEEEEEecccccccccccccEEEe
Confidence 88887765422211 1 1 4567778722 666664432 3344433
Q ss_pred CCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC--------CcEEEEEcCCCCCCcceeEEEecc
Q psy10348 200 GRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS--------GRTYVWDLDVQDPSSIKFQILSHP 271 (291)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~~~~~ 271 (291)
.+++ ...+..+ ..+. .+ +|+|++|+.++.+ ..|.+|| +++ . ..+ ..
T Consensus 206 d~~~-------------~~~l~~~-~~~~--~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~----~-~~l-~~ 259 (347)
T 2gop_A 206 EDGK-------------EEKMFEK-VSFY--AV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE----V-MGI-LD 259 (347)
T ss_dssp ETTE-------------EEEEEEE-ESEE--EE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC----E-EES-ST
T ss_pred CCCc-------------eEEeccC-ccee--eE--CCCCCEEEEEEccccCCccccceEEEEC--CCc----e-Eec-cc
Confidence 3321 1222212 2222 22 6779988877744 3677787 332 1 111 22
Q ss_pred ccccceee-eEEccCCceee
Q psy10348 272 RCMSAVRQ-TTLSKNGNVLL 290 (291)
Q Consensus 272 ~~~~~v~~-~~~s~~g~~l~ 290 (291)
.+...+.. +.|+ || +++
T Consensus 260 ~~~~~~~~~~~~s-dg-~~~ 277 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GK-VYF 277 (347)
T ss_dssp TCCSEEEEEEEET-TE-EEE
T ss_pred cCCcccCCccEEc-Cc-EEE
Confidence 44567776 8999 87 554
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=4e-12 Score=98.83 Aligned_cols=227 Identities=9% Similarity=0.009 Sum_probs=140.8
Q ss_pred ceeEEEEeeeccCCCCCEEEE-------ecCCCeEEEEccCCcceeEEEe----eeccceeEEEEecCC-CcEEEEeecC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAV-------AGSRAVIRIFSPAFHACVRHFY----GHGHAINELKFHPQD-FNLLLSVSKD 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~-------~~~dg~i~vw~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~~l~s~~~d 78 (291)
....+++|++++ .++++ +..++.|.+||..+++...... ++...+..+++++ + +.++++.. .
T Consensus 18 ~~~~~~~~~~~g----~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~~-~ 91 (314)
T 1pjx_A 18 PGAEGPVFDKNG----DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVADM-R 91 (314)
T ss_dssp TTCEEEEECTTS----CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEET-T
T ss_pred CCccCceECCCC----CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEEC-C
Confidence 455789999877 47777 5778999999988777543221 1556789999999 6 66665544 4
Q ss_pred CeEEEEECCCcceeee-ecccc-CCCCceEEEEEccCCCEEEEEecC---------------CcEEEEeccCchhhhhhc
Q psy10348 79 HTLRLWNIKTDICIAI-FGGVE-GHRDEVLSADFDLLGTKIMSCGMD---------------HSLKLWDLTKPEIKDACA 141 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d---------------~~i~v~d~~~~~~~~~~~ 141 (291)
+.|.+||.. ++.... ..... .....+.+++++++|+++++...+ +.|..||.. ++.....
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~- 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD- 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-
Confidence 479999988 665433 21101 122458899999999877776655 456666654 3221110
Q ss_pred cccccCCCCccccccCccccCcccccccccCcceeEEEEc----CC--EE-EEecCCCeEEEecCC-CCCccccccCCCc
Q psy10348 142 ESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL----GD--FV-LSKSCENCIICWKPG-RLEDKELRTNETN 213 (291)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~--~l-~~~~~d~~i~iwd~~-~~~~~~~~~~~~~ 213 (291)
.+......++++ .+ .+ ++...++.|.+||.. .+... .
T Consensus 169 ----------------------------~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~-------~ 213 (314)
T 1pjx_A 169 ----------------------------TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE-------N 213 (314)
T ss_dssp ----------------------------EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE-------E
T ss_pred ----------------------------cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccc-------c
Confidence 012234566665 32 44 444568899999975 22110 0
Q ss_pred eeeeeeecCCc-ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348 214 VTIINRLNFKD-CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 214 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 289 (291)
......+..+. .... .++++++|+++++...++.|.+||..+++.. ..+. .+...+.+++|+|+|++|
T Consensus 214 ~~~~~~~~~~~~~~p~--~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~----~~~~--~~~~~~~~i~~~~dg~~l 282 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGAD--GMDFDEDNNLLVANWGSSHIEVFGPDGGQPK----MRIR--CPFEKPSNLHFKPQTKTI 282 (314)
T ss_dssp EEEEEECCCCSSCEEE--EEEEBTTCCEEEEEETTTEEEEECTTCBSCS----EEEE--CSSSCEEEEEECTTSSEE
T ss_pred ceEEEECCCCCCCCCC--ceEECCCCCEEEEEcCCCEEEEEcCCCCcEe----EEEe--CCCCCceeEEECCCCCEE
Confidence 01122232222 2233 3566788988888878889999998866432 2232 223578999999999844
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=2.7e-12 Score=103.34 Aligned_cols=245 Identities=8% Similarity=0.012 Sum_probs=146.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEECCC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWNIKT 88 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~ 88 (291)
.....++|++++ .++++...++.|++||.++++....... ..... ++|++ +++.|+++..++ .|.+++...
T Consensus 131 ~~P~~la~d~~g----~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNN----TVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTT----EEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCC----CEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCC
Confidence 356788999887 4777777789999999987776555443 23334 99999 888888887765 789998876
Q ss_pred cceeeeeccccC-CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 89 DICIAIFGGVEG-HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 89 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
+.....+..+.. ....+.+++++|++..|+.+..++.|+.||..++... .+.. .....
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~-~~~~g------------------- 262 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQ-LELSG------------------- 262 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEE-CCCCS-------------------
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEec-ccccC-------------------
Confidence 554333311122 4566788999996556666777889999998866421 1100 00000
Q ss_pred ccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCC-Cceeeeee-ecCCcccEEEEEEEecCCCcEEE
Q psy10348 168 RDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNE-TNVTIINR-LNFKDCEIWFIRFSMDYWQKILA 242 (291)
Q Consensus 168 ~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~ 242 (291)
.....+...++|+ +.++++...++.|+.|+....... +.... .....-.. ....-.. ...++++|+|++++
T Consensus 263 -~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~-~~g~~~~~g~~dg~~~~~~~~~--P~gia~d~dG~lyv 338 (409)
T 3hrp_A 263 -SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEW-FCGSATQKTVQDGLREEALFAQ--PNGMTVDEDGNFYI 338 (409)
T ss_dssp -CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE-EEECTTCCSCBCEEGGGCBCSS--EEEEEECTTCCEEE
T ss_pred -CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEE-EEeCCCCCCcCCCcccccEeCC--CeEEEEeCCCCEEE
Confidence 0001111278887 335566667889999987643110 00000 00000000 0000011 23456678899888
Q ss_pred EEc-CCCcEEEEEcCCCCCCcceeEEEeccc------------cccceeeeEEccCCceeeC
Q psy10348 243 VGN-QSGRTYVWDLDVQDPSSIKFQILSHPR------------CMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 243 ~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~g~~l~s 291 (291)
+-+ .++.|+.|++.++. ......... .-.....++++++|.++++
T Consensus 339 ad~~~~~~I~~~~~~~G~----v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa 396 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGY----VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIA 396 (409)
T ss_dssp EETTTTCEEEEEETTTTE----EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE
T ss_pred EeCCCCCEEEEEECCCCE----EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEE
Confidence 887 89999999987663 212222100 1235789999999887764
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=1.3e-11 Score=95.12 Aligned_cols=222 Identities=4% Similarity=-0.109 Sum_probs=147.2
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 87 (291)
...+.++++.+++ .++++...++.|..|+.+ ++. ..+. .....+..+++.+ ++.++++...++.|.+||.
T Consensus 56 ~~~~~~i~~~~~g----~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~- 127 (299)
T 2z2n_A 56 DAKVMCLTISSDG----EVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD- 127 (299)
T ss_dssp TCCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-
T ss_pred cCceeeEEECCCC----CEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-
Confidence 4568889998887 477777778899999986 443 3332 2345688999999 8888887777889999998
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
+++..... .......+..++++++|..+++...++.|..||. +++.... .
T Consensus 128 ~g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~-------------------------- 177 (299)
T 2z2n_A 128 DGKIREYE--LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF-K-------------------------- 177 (299)
T ss_dssp TCCEEEEE--CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-E--------------------------
T ss_pred CCCEEEec--CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-e--------------------------
Confidence 55544322 1334567899999999987777767789999998 5543211 0
Q ss_pred ccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348 168 RDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 245 (291)
.......+..++++ +++.++...++.|.+||. ++... ..........+. .+..+++|+++++..
T Consensus 178 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~~--~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 178 IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-----------EFKIPTPNARPH--AITAGAGIDLWFTEW 243 (299)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCEE--EEEECSTTCEEEEET
T ss_pred CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-----------EEECCCCCCCce--eEEECCCCCEEEecc
Confidence 00123346778887 566666666889999998 44321 111122223333 455667788777766
Q ss_pred CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.++.|..||.. ++ ...+....+...+.++++ ++|++.+
T Consensus 244 ~~~~i~~~d~~-g~-----~~~~~~~~~~~~~~~i~~-~~g~l~v 281 (299)
T 2z2n_A 244 GANKIGRLTSN-NI-----IEEYPIQIKSAEPHGICF-DGETIWF 281 (299)
T ss_dssp TTTEEEEEETT-TE-----EEEEECSSSSCCEEEEEE-CSSCEEE
T ss_pred CCceEEEECCC-Cc-----eEEEeCCCCCCccceEEe-cCCCEEE
Confidence 78899999983 31 123322334467899999 8888765
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=6.9e-12 Score=99.66 Aligned_cols=109 Identities=7% Similarity=-0.100 Sum_probs=81.0
Q ss_pred CEEEEecC--CC---eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcce
Q psy10348 27 PLLAVAGS--RA---VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDIC 91 (291)
Q Consensus 27 ~~l~~~~~--dg---~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~ 91 (291)
+++++... .+ .|.++|..+++.+..+..-..+ .++++| ++++++.+. .++.|.+||..+.+.
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 46666543 33 8899999999988887754444 999999 888888875 367899999998887
Q ss_pred eeeeccc-cC---CCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhh
Q psy10348 92 IAIFGGV-EG---HRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDA 139 (291)
Q Consensus 92 ~~~~~~~-~~---~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~ 139 (291)
+..+... .. +......+.|+|+|++|+++.. ++.|.++| .+++.+..
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 7765311 00 0133568999999999998874 57899999 98886654
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=6e-13 Score=101.21 Aligned_cols=197 Identities=5% Similarity=-0.143 Sum_probs=133.4
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe-eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
..+.++++.+++ .++++.. ++.|.+||...... ..+. .....+..+++.+ ++.++++...++.|.+|+..+.
T Consensus 67 ~~p~~i~~~~~g----~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 67 YQPQGLAVDGAG----TVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp CSCCCEEECTTC----CEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCC
T ss_pred CCcceeEECCCC----CEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCc
Confidence 456788888877 4666655 88999999875543 3332 2235688999999 8888887777889999986554
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (291)
...... ......+.+++++++|+++++...++.|.+||.......... .
T Consensus 140 ~~~~~~---~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~----------------------------~ 188 (270)
T 1rwi_B 140 TQTVLP---FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP----------------------------F 188 (270)
T ss_dssp SCEECC---CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC----------------------------C
T ss_pred eeEeec---cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec----------------------------c
Confidence 433222 233346788999999987777777889999998765422110 0
Q ss_pred ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348 170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247 (291)
Q Consensus 170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 247 (291)
.+...+..++++ |.++++...++.|.+||....... .....+...+. .++++++|+++++...+
T Consensus 189 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~------------~~~~~~~~~p~--~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 189 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST------------VLPFTGLNTPL--AVAVDSDRTVYVADRGN 254 (270)
T ss_dssp SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE------------ECCCCSCSCEE--EEEECTTCCEEEEEGGG
T ss_pred cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce------------eeccCCCCCce--eEEECCCCCEEEEECCC
Confidence 122456788887 556666667889999998654321 11111112233 45566779988888899
Q ss_pred CcEEEEEcCCCC
Q psy10348 248 GRTYVWDLDVQD 259 (291)
Q Consensus 248 g~i~vwd~~~~~ 259 (291)
+.|+++++...+
T Consensus 255 ~~v~~~~~~~~~ 266 (270)
T 1rwi_B 255 DRVVKLTSLEHH 266 (270)
T ss_dssp TEEEEECCCGGG
T ss_pred CEEEEEcCCCcc
Confidence 999999998764
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=2.5e-11 Score=93.70 Aligned_cols=229 Identities=10% Similarity=0.044 Sum_probs=142.1
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
.--.+..|+++.. .++++...++.|..||..+++. ..+. ....+.++++++ +++++++ . ++.|.+||.++++
T Consensus 13 ~~~Egp~w~~~~~---~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 13 RCGESPVWEEVSN---SLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp SBEEEEEEETTTT---EEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTE
T ss_pred ccccCCeEECCCC---EEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCc
Confidence 3445788998653 5777777889999999987765 3333 457799999999 8785554 3 5679999998776
Q ss_pred eeeeecccc-CCCCceEEEEEccCCCEEEEEecC---------CcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348 91 CIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGMD---------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE 160 (291)
Q Consensus 91 ~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
......... .....+..++++|+|+++++...+ ..-.+|.+........+.
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~------------------- 145 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF------------------- 145 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-------------------
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-------------------
Confidence 543321101 123458899999999966654322 233455544221111110
Q ss_pred cCcccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCC--CCCccccccCCCceeeeeeecCCcccEEEEEEEec
Q psy10348 161 HFPQFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPG--RLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD 235 (291)
Q Consensus 161 ~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (291)
.+......++|+ ++.+ ++.+.++.|.+||+. ++... ..+.+..+........ .++.+
T Consensus 146 ---------~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~-------~~~~~~~~~~~~~~p~--g~~~d 207 (297)
T 3g4e_A 146 ---------DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS-------NRRSVYKLEKEEQIPD--GMCID 207 (297)
T ss_dssp ---------EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE-------EEEEEEECCGGGCEEE--EEEEB
T ss_pred ---------eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc-------CcEEEEECCCCCCCCC--eeEEC
Confidence 122335678887 5544 556668899999873 33210 0011222222222333 35567
Q ss_pred CCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc-cCCceee
Q psy10348 236 YWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS-KNGNVLL 290 (291)
Q Consensus 236 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~ 290 (291)
++|++.++...++.|..||..+++. ...+.. ....+++++|. ||++.|.
T Consensus 208 ~~G~lwva~~~~~~v~~~d~~tG~~----~~~i~~--p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 208 AEGKLWVACYNGGRVIRLDPVTGKR----LQTVKL--PVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp TTSCEEEEEETTTEEEEECTTTCCE----EEEEEC--SSSBEEEEEEESGGGCEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCceE----EEEEEC--CCCCceEEEEeCCCCCEEE
Confidence 8898887777788999999987742 233332 23578999998 8887664
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.55 E-value=3.6e-12 Score=98.33 Aligned_cols=197 Identities=12% Similarity=0.000 Sum_probs=129.4
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee----ccceeEEEEecCCCcEEEE----ee----
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH----GHAINELKFHPQDFNLLLS----VS---- 76 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s----~~---- 76 (291)
+...+.++++++++ .++++...++.|.+||..+++........ ...+..++++| +++++++ |.
T Consensus 67 ~~~~~~~l~~~~dg----~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~ 141 (296)
T 3e5z_A 67 PSHHQNGHCLNKQG----HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPE 141 (296)
T ss_dssp SCSSEEEEEECTTC----CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGG
T ss_pred CCCCcceeeECCCC----cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCcccccccc
Confidence 44668899999988 47777777789999999888765443322 23467899999 8888887 33
Q ss_pred ---------cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEecc-Cchhhhhhcccccc
Q psy10348 77 ---------KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-KPEIKDACAESYTF 146 (291)
Q Consensus 77 ---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~ 146 (291)
..+.|..++.. ++. ..+ ..+......++|+|+++.+++.+.++.|.+||+. +++...... .
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g~~-~~~---~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~---~- 212 (296)
T 3e5z_A 142 EGYGGEMELPGRWVFRLAPD-GTL-SAP---IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV---H- 212 (296)
T ss_dssp GSSCCCCCSSSCEEEEECTT-SCE-EEE---ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE---E-
T ss_pred ccccccccCCCcEEEEECCC-CCE-EEe---ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe---E-
Confidence 13456666655 443 333 3556677899999999988777778999999987 333200000 0
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD 224 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
+ ..+...+..++++ |++.++. ++.|.+||.. ++ .+..+..+.
T Consensus 213 ------------------~---~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~------------~~~~~~~~~ 256 (296)
T 3e5z_A 213 ------------------F---TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD------------ELGRVLTPQ 256 (296)
T ss_dssp ------------------E---CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC------------EEEEEECSS
T ss_pred ------------------e---eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC------------EEEEEECCC
Confidence 0 0123345678887 5555444 8899999986 32 245555555
Q ss_pred ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348 225 CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 258 (291)
. +..+++. +|+++.|++++.++ +.-++..+.
T Consensus 257 ~-~~~~~f~-~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 257 T-TSNLCFG-GPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp C-CCEEEEE-STTSCEEEEEETTE-EEEEECSCC
T ss_pred C-ceeEEEE-CCCCCEEEEEcCCe-EEEEEcccc
Confidence 4 5555554 57789999988764 445555554
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.55 E-value=7.9e-12 Score=104.35 Aligned_cols=245 Identities=11% Similarity=0.001 Sum_probs=150.9
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccC--CcceeEEEeeeccceeEEEEe----cCCCcEEEEeec-CCeE
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPA--FHACVRHFYGHGHAINELKFH----PQDFNLLLSVSK-DHTL 81 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~s~~~-dg~i 81 (291)
....+..+.|+|++ +++++++.|+.|.+||+. +++.+..+.... ....++|+ | +++++++++. +++|
T Consensus 195 ~g~~p~~v~~SpDG----r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~p-DGk~l~v~n~~~~~v 268 (567)
T 1qks_A 195 TGYAVHISRLSASG----RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGW-EDKYAIAGAYWPPQY 268 (567)
T ss_dssp CSSCEEEEEECTTS----CEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTC-TTTEEEEEEEETTEE
T ss_pred CCCCccceEECCCC----CEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCC-CCCEEEEEEccCCeE
Confidence 34566789999998 599999999999999995 788888887533 45789999 7 7777776654 5899
Q ss_pred EEEECCCcceeeeecccc----C---CC---------------------------------------------CceEEEE
Q psy10348 82 RLWNIKTDICIAIFGGVE----G---HR---------------------------------------------DEVLSAD 109 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~~~----~---~~---------------------------------------------~~i~~~~ 109 (291)
.++|..+.+.+..+.... . |. .....+.
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~ 348 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 348 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCce
Confidence 999998887776553110 0 00 1123456
Q ss_pred EccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CC-EE
Q psy10348 110 FDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GD-FV 185 (291)
Q Consensus 110 ~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l 185 (291)
|+|++++|+++. .++.|.++|+.+++....+... .. ..|...-..+ ++ +. ..
T Consensus 349 ~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg-g~----------------------~Phpg~g~~~-~~p~~g~v~ 404 (567)
T 1qks_A 349 LDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG-GQ----------------------TPHPGRGANF-VHPTFGPVW 404 (567)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS-SS----------------------SBCCTTCEEE-EETTTEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc-Cc----------------------CCCCccceee-ECCCCCcEE
Confidence 778888766655 4677888888777654433210 00 0132211111 23 23 44
Q ss_pred EEec-CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC-------CCcEEEEEcCC
Q psy10348 186 LSKS-CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ-------SGRTYVWDLDV 257 (291)
Q Consensus 186 ~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~ 257 (291)
+++. .++.|.++|....... ....+.+.++...... .+.+..+|++++|.+... .++|.|+|+.+
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~-----~~~~kvv~~i~~~g~g--~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHP-----DNAWKILDSFPALGGG--SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCT-----TTBTSEEEEEECSCSC--CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred EeCCCCCCeEEEecCCCCCCc-----cccCEEEEEEecCCCC--CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 4443 4689999998863211 0001345665544322 122446788999998763 45999999998
Q ss_pred CCC--CcceeEEEec------cccccceeeeEEccCCceee
Q psy10348 258 QDP--SSIKFQILSH------PRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 258 ~~~--~~~~~~~~~~------~~~~~~v~~~~~s~~g~~l~ 290 (291)
.+. .......+.. ..-...+..+.|+|+|+++.
T Consensus 478 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 518 (567)
T 1qks_A 478 MTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVW 518 (567)
T ss_dssp CCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEE
T ss_pred ccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEE
Confidence 721 0011122211 01134788999999998764
No 200
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=5.2e-13 Score=105.45 Aligned_cols=146 Identities=9% Similarity=-0.044 Sum_probs=111.6
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc---------e-eEEEeeeccceeEEEEecCCCcEEEEeecCCe
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA---------C-VRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 80 (291)
.+++.+++++.. .++++|+.+ .+++|+++..+ . ......+.. |+.|+| ++.+|+++ .++.
T Consensus 38 ~~~nlLais~~~----gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~ 107 (388)
T 1xip_A 38 ASLQNLDISNSK----SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNA 107 (388)
T ss_dssp SCCBCEEEETTT----TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSE
T ss_pred ccccEEEEcCCC----CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCc
Confidence 468999999998 499999887 56669875443 1 112234666 999999 55788888 8899
Q ss_pred EEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE 160 (291)
Q Consensus 81 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
|++||+.+....... ..|..++.++.+.+. .+++++.||.|.+||+.++....
T Consensus 108 l~v~dv~sl~~~~~~---~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---------------------- 160 (388)
T 1xip_A 108 LYSLDLEELSEFRTV---TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---------------------- 160 (388)
T ss_dssp EEEEESSSTTCEEEE---EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----------------------
T ss_pred EEEEEchhhhccCcc---ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----------------------
Confidence 999999876655544 466778888887755 38889999999999998776421
Q ss_pred cCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCC
Q psy10348 161 HFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLE 203 (291)
Q Consensus 161 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (291)
+...|+|++|+.+-++.|..||++++|+....+
T Consensus 161 ----------~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 161 ----------LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp ----------EEESEEEEEECSSEEEEEETTSCEEEEEEETTE
T ss_pred ----------ccCCceEEEEcCCceEEEEcCCcEEEEcCCCcc
Confidence 445799999995558889999999999876654
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.53 E-value=1e-11 Score=94.62 Aligned_cols=184 Identities=9% Similarity=0.013 Sum_probs=130.7
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeec-CCeEEEEECCC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSK-DHTLRLWNIKT 88 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~ 88 (291)
..+.++.++|++ ++++ +.++.|..||. +++.+..+..+. ..+.++.+.+ +++++++.+. ++.|..+|. +
T Consensus 37 ~~~~~~~~~pdG----~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~ 107 (276)
T 3no2_A 37 WECNSVAATKAG----EILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-K 107 (276)
T ss_dssp CCCCEEEECTTS----CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-T
T ss_pred CCCcCeEECCCC----CEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeC-C
Confidence 367888999988 4777 34778999999 799999988653 4788899999 8999998887 788888886 5
Q ss_pred cceeeeeccc---cCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 89 DICIAIFGGV---EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 89 ~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
|+.+..+..- ..+......+...++|+++++...++.|..||.. ++.+.++..
T Consensus 108 Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~----------------------- 163 (276)
T 3no2_A 108 GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL----------------------- 163 (276)
T ss_dssp SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC-----------------------
T ss_pred CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC-----------------------
Confidence 7776665310 1222345566788999999999999999999988 887665542
Q ss_pred ccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc----ccEEEEEEEecCCCc
Q psy10348 166 STRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD----CEIWFIRFSMDYWQK 239 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~ 239 (291)
.....++... ++.++++..+++|..+|..+++. +.++.... ...........++|.
T Consensus 164 ------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~------------~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 164 ------SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI------------VRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp ------SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE------------EEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred ------CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE------------EEEecCCCCCCccccccccceEcCCCC
Confidence 1122234443 77888888888999999987754 44443211 112233455567788
Q ss_pred EEEEEc
Q psy10348 240 ILAVGN 245 (291)
Q Consensus 240 ~l~~~~ 245 (291)
++++.+
T Consensus 226 i~v~~~ 231 (276)
T 3no2_A 226 LYICNW 231 (276)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888874
No 202
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=115.73 Aligned_cols=181 Identities=12% Similarity=-0.008 Sum_probs=103.9
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCC-ce
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD-EV 105 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~i 105 (291)
..+++++.||.|+.||..+|+.+..+.. +.+.+..+.. ++..+++++.||.|+.||.++|+.+..+ ..+.. .+
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~---~~~~~~~~ 83 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKL---PFTIPELV 83 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEEC---SCCHHHHH
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeee---eccCcccc
Confidence 5899999999999999999999988876 5566666666 6678888889999999999988877665 22211 11
Q ss_pred EE-EEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCE
Q psy10348 106 LS-ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDF 184 (291)
Q Consensus 106 ~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 184 (291)
.+ ..+. .+..+++++.|+.++.||.++++.+..+... . .+. ..-.++.
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~----------------------------~-~~~-~~p~~~~ 132 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA----------------------------F-ADS-LSPSTSL 132 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC----------------------------------------------------
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC----------------------------C-ccc-ccccCCE
Confidence 00 0111 3457788888999999999999977654321 0 000 0113678
Q ss_pred EEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC---cEEEEEcCCCcEEEEEcCCCCC
Q psy10348 185 VLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ---KILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
+++++.|+.|..||.++++.. ..+.... ......+++. ..+++++.||.|+.||..+++.
T Consensus 133 v~~~~~dg~v~a~d~~tG~~~------------W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTRELR------------WNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSCC------------CEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred EEEEecCCEEEEEECCCCCEE------------EeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 888999999999999887642 2211110 0011222221 5677888999999999999863
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=4e-12 Score=100.11 Aligned_cols=249 Identities=8% Similarity=-0.040 Sum_probs=151.6
Q ss_pred EEeeeccCCCCCEEEEecC-----CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCe
Q psy10348 16 CAWSMDLESGRPLLAVAGS-----RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHT 80 (291)
Q Consensus 16 ~~~s~~~~~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~ 80 (291)
....|++ ..+++... ++.|.+.|..+++.+..+..-..+ .++++| +++++++++ .++.
T Consensus 38 ~~~~pd~----~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~sp-DG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 38 EAPAPDA----RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVAD-DGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCT----TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEE
T ss_pred eccCCCC----CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECC-CCCEEEEEcccccccccCCCCCE
Confidence 3445666 46666644 689999999999999999865555 499999 888877765 3678
Q ss_pred EEEEECCCcceeeeeccccC----CCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccc-----------
Q psy10348 81 LRLWNIKTDICIAIFGGVEG----HRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAES----------- 143 (291)
Q Consensus 81 i~vwd~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~----------- 143 (291)
|.+||..+++.+..+..-.+ .......+.++|+|++++++.. ++.|.++|+.+++.+.++...
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~ 190 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPD 190 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETT
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCc
Confidence 99999999998887631110 1224567899999999988864 689999999999988776421
Q ss_pred --cccCCCCccccccCcc-ccCccc--ccccccCcce-eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCcee
Q psy10348 144 --YTFNPARSTRPFDTQK-EHFPQF--STRDIHRNYV-DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVT 215 (291)
Q Consensus 144 --~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~v-~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 215 (291)
....+++....+.... ...... .....-..++ ....|. ...++..+.+|.|.+.|+......
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~---------- 260 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAK---------- 260 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCE----------
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcce----------
Confidence 1223333333222211 111000 0000011112 123553 233333555899999998765431
Q ss_pred eeeeec---------C-CcccEEEEEEEecCCCcEEEEEcC----------CCcEEEEEcCCCCCCcceeEEEecccccc
Q psy10348 216 IINRLN---------F-KDCEIWFIRFSMDYWQKILAVGNQ----------SGRTYVWDLDVQDPSSIKFQILSHPRCMS 275 (291)
Q Consensus 216 ~~~~~~---------~-~~~~i~~~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 275 (291)
.+..+. + ....... +..+++++.+++... .+.|.++|+.+++.+ ..+.. ..
T Consensus 261 v~~~~~~~~~~~~~~g~~p~g~q~--~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~----~~i~v---g~ 331 (386)
T 3sjl_D 261 FLPAVEALTEAERADGWRPGGWQQ--VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL----AKFEM---GH 331 (386)
T ss_dssp ECCCEESSCHHHHHTTEEECSSSC--EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEEE---EE
T ss_pred eecceeccccccccccccCCCcce--eeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE----EEEEC---CC
Confidence 121111 0 0011112 334577888877643 257999999998643 22222 13
Q ss_pred ceeeeEEccCCc-eee
Q psy10348 276 AVRQTTLSKNGN-VLL 290 (291)
Q Consensus 276 ~v~~~~~s~~g~-~l~ 290 (291)
.+.+|++++|++ +|+
T Consensus 332 ~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLY 347 (386)
T ss_dssp EECEEEECSSSSCEEE
T ss_pred CcceEEECCCCCeEEE
Confidence 788999999997 543
No 204
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.51 E-value=5.7e-12 Score=108.94 Aligned_cols=222 Identities=9% Similarity=-0.049 Sum_probs=134.0
Q ss_pred eccCCCCCEEEEecCC-----CeEEEEccCCcceeEEEe------eeccceeEEEEecCCCcEEEEeecCC-----eEEE
Q psy10348 20 MDLESGRPLLAVAGSR-----AVIRIFSPAFHACVRHFY------GHGHAINELKFHPQDFNLLLSVSKDH-----TLRL 83 (291)
Q Consensus 20 ~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg-----~i~v 83 (291)
|++ ++++....+ +.+.+.+...++....+. +|...+..++|+| |+++||.+..++ .|++
T Consensus 81 ~dG----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKG----KRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EET----TEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEE
T ss_pred EEC----CEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEE
Confidence 666 355544322 245555554444332222 2334688999999 889888765543 8999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc----------------EEEEeccCchhhhhhccccccC
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS----------------LKLWDLTKPEIKDACAESYTFN 147 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~----------------i~v~d~~~~~~~~~~~~~~~~~ 147 (291)
||+.+++..... .. ...+..++|+|||+.|+.++.++. |++|++.+++....+.
T Consensus 156 ~d~~tg~~~~~~---~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v------ 225 (710)
T 2xdw_A 156 MKVDGAKELPDV---LE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC------ 225 (710)
T ss_dssp EETTTTEEEEEE---EE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE------
T ss_pred EECCCCCCCccc---cc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE------
Confidence 999998876543 11 223677999999999999888766 9999998766321110
Q ss_pred CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecC-----CCeEEEecCCC------CCccccccCCCce
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSC-----ENCIICWKPGR------LEDKELRTNETNV 214 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-----d~~i~iwd~~~------~~~~~~~~~~~~~ 214 (291)
.....|...+..+.|+ |++|+..+. +..|.+||+.+ +..
T Consensus 226 ------------------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---------- 277 (710)
T 2xdw_A 226 ------------------AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL---------- 277 (710)
T ss_dssp ------------------ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC----------
T ss_pred ------------------eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc----------
Confidence 0001134456778887 667766553 57899999875 311
Q ss_pred eeeeeecCCcccEEEEEEEecCCCcEEEEEcCC----CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 215 TIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS----GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 215 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
....+..+...+.. .++ |+|..|+..+.+ +.|.+||+.+++.. ....+..+ .....+.+++|++++.+++
T Consensus 278 -~~~~l~~~~~~~~~-~~s--~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~-~~~~~~~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 278 -KWVKLIDNFEGEYD-YVT--NEGTVFTFKTNRHSPNYRLINIDFTDPEES-KWKVLVPE-HEKDVLEWVACVRSNFLVL 351 (710)
T ss_dssp -CCEEEECSSSSCEE-EEE--EETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEEECC-CSSCEEEEEEEETTTEEEE
T ss_pred -ceEEeeCCCCcEEE-EEe--ccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cceeccCC-CCCCeEEEEEEEcCCEEEE
Confidence 12333333333332 234 558877766543 36999999876421 11122221 1113678899997776654
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=9.7e-11 Score=90.23 Aligned_cols=224 Identities=8% Similarity=-0.051 Sum_probs=147.1
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-EeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
...+.++++.+++ .++++...++.|.+||.. ++.... +......+..+++.+ ++.++++...++.|..+|..
T Consensus 19 ~~~p~~i~~d~~g----~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 19 DSGPYGITSSEDG----KVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp TCCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred CCCcceeeECCCC----CEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-
Confidence 4578899999887 477777678999999987 554331 122235688999998 88887777667899999987
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
++... +. .......+.++++.++++++++...++.|..+|.. ++... +. .
T Consensus 92 g~~~~-~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~--------------------------~ 141 (300)
T 2qc5_A 92 GGFTE-YP-LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YD--------------------------L 141 (300)
T ss_dssp SCEEE-EE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EE--------------------------C
T ss_pred CCeEE-ec-CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-cc--------------------------C
Confidence 55432 21 12344678999999999888777768889999876 43221 10 0
Q ss_pred cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348 169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ 246 (291)
Q Consensus 169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 246 (291)
......+..++++ +++.++...++.|..+|. .++.. ..........+ ..+..++++.+.++...
T Consensus 142 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~--~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 142 PNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE-----------EYPLPTNAAAP--VGITSGNDGALWFVEIM 207 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCE--EEEEECTTSSEEEEETT
T ss_pred CCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-----------EeeCCCCCCCc--ceEEECCCCCEEEEccC
Confidence 0022346778886 666666666789999997 33221 11111122223 34556677887777777
Q ss_pred CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.+.|.+|+. +++. ...........+.+++++++|++.+
T Consensus 208 ~~~i~~~~~-~g~~-----~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 208 GNKIGRITT-TGEI-----SEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp TTEEEEECT-TCCE-----EEEECSSTTCCEEEEEECSTTCEEE
T ss_pred CCEEEEEcC-CCcE-----EEEECCCCCCCceEEEECCCCCEEE
Confidence 788999998 3321 1222223345688999999998665
No 206
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.49 E-value=3.5e-12 Score=110.00 Aligned_cols=220 Identities=8% Similarity=0.029 Sum_probs=129.4
Q ss_pred eeccCCCCCEEEEecCCC-----eEEEEccCCcceeEEEe------eeccceeEEEEecCCCcEEE-----EeecCCeEE
Q psy10348 19 SMDLESGRPLLAVAGSRA-----VIRIFSPAFHACVRHFY------GHGHAINELKFHPQDFNLLL-----SVSKDHTLR 82 (291)
Q Consensus 19 s~~~~~~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~-----s~~~dg~i~ 82 (291)
+|++ .+++....++ .|.+.+...++....+. +|...+..++|+| |+++|| .|+.+..|+
T Consensus 76 ~~dG----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 76 SRRN----GRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLH 150 (695)
T ss_dssp EEET----TEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEE
T ss_pred EEEC----CEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECC-CCCEEEEEECCCCCceEEEE
Confidence 3666 4666555432 34444544444333332 3445789999999 889888 455567899
Q ss_pred EEECCCccee-eeeccccCCCCceEEEEEccCCCEEEEEecCCc-------------EEEEeccCchhhhhhccccccCC
Q psy10348 83 LWNIKTDICI-AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS-------------LKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 83 vwd~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-------------i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
+||+.+++.+ ... +... ....++|+|+|+.|+.++.|.. |++|++.++.....+.
T Consensus 151 v~dl~tg~~~~~~~--~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv------- 219 (695)
T 2bkl_A 151 VIDVDSGEWSKVDV--IEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV------- 219 (695)
T ss_dssp EEETTTCCBCSSCC--BSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE-------
T ss_pred EEECCCCCCcCCcc--cCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE-------
Confidence 9999998765 211 0111 1267899999999999988776 9999998876321111
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCC----eEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCEN----CIICWKPGRLEDKELRTNETNVTIINRLNF 222 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
.....+...+..+.|+ |++|+..+.++ .|.+|+...... ..+..
T Consensus 220 -----------------~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-------------~~l~~ 269 (695)
T 2bkl_A 220 -----------------HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-------------RLLVK 269 (695)
T ss_dssp -----------------ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-------------EEEEE
T ss_pred -----------------EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-------------EEeec
Confidence 0011244567788888 77777766555 677776544322 22222
Q ss_pred CcccEEEEEEEecCCCcEEEEEc---CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 223 KDCEIWFIRFSMDYWQKILAVGN---QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 223 ~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+........+ ++|.+++... .++.|.+||+.+++.. .....+.. .....+.+++|+ ++.+++
T Consensus 270 ~~~~~~~~~~---~~g~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~-~~~~~l~~~~~~-~~~lv~ 334 (695)
T 2bkl_A 270 GVGAKYEVHA---WKDRFYVLTDEGAPRQRVFEVDPAKPARA-SWKEIVPE-DSSASLLSVSIV-GGHLSL 334 (695)
T ss_dssp CSSCCEEEEE---ETTEEEEEECTTCTTCEEEEEBTTBCSGG-GCEEEECC-CSSCEEEEEEEE-TTEEEE
T ss_pred CCCceEEEEe---cCCcEEEEECCCCCCCEEEEEeCCCCCcc-CCeEEecC-CCCCeEEEEEEE-CCEEEE
Confidence 2222322222 3466444443 2588999999876421 11222221 223467788887 555544
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.49 E-value=1.5e-10 Score=89.16 Aligned_cols=222 Identities=7% Similarity=-0.091 Sum_probs=145.4
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
..+.++++.+++ .++++...++.|..||.. ++.. .+. .....+..+++.+ ++.++++...++.|..+|..
T Consensus 62 ~~~~~i~~~~~g----~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 62 AKVMCLIVSSLG----DIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp CCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-
T ss_pred CcceeEEECCCC----CEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-
Confidence 567888888777 477776667899999987 6543 332 2335688999998 88888877768899999987
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
++..... +......+..+++.++++.+++...++.|..+|. +++... +. .
T Consensus 134 g~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~--------------------------~ 183 (300)
T 2qc5_A 134 GTIYEYD--LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YP--------------------------L 183 (300)
T ss_dssp SCEEEEE--CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE--------------------------C
T ss_pred CCEEEcc--CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-ee--------------------------C
Confidence 5544321 1334567899999999996666666788999987 443221 10 0
Q ss_pred cccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC
Q psy10348 169 DIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ 246 (291)
Q Consensus 169 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 246 (291)
..+...+..++++ +++.++....+.|.+||. .+... ..........+ ..++.+++|++.++...
T Consensus 184 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-----------~~~~~~~~~~~--~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 184 PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS-----------EYDIPTPNARP--HAITAGKNSEIWFTEWG 249 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-----------EEECSSTTCCE--EEEEECSTTCEEEEETT
T ss_pred CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE-----------EEECCCCCCCc--eEEEECCCCCEEEeccC
Confidence 0123446788887 556666666778999997 33221 11111122223 34566777887777767
Q ss_pred CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 247 SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 247 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
++.|..|+.. ++ . ..+........+.+++++++|++.+
T Consensus 250 ~~~i~~~~~~-g~----~-~~~~~~~~~~~~~~i~~~~~g~l~v 287 (300)
T 2qc5_A 250 ANQIGRITND-NT----I-QEYQLQTENAEPHGITFGKDGSVWF 287 (300)
T ss_dssp TTEEEEECTT-SC----E-EEEECCSTTCCCCCEEECTTSCEEE
T ss_pred CCeEEEECCC-Cc----E-EEEECCccCCccceeEeCCCCCEEE
Confidence 7899999983 32 1 2222223345688999999998765
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=3.3e-10 Score=88.57 Aligned_cols=225 Identities=8% Similarity=-0.097 Sum_probs=136.8
Q ss_pred eEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 92 (291)
..+.+|+|++. .++++...++.|..||.++++.. .+. ....+.+++|++ +++++++. .+ .|.+||..+++..
T Consensus 51 ~egp~~~~~~~---~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASG---TAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTT---EEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEE
T ss_pred CcCCeEeCCCC---EEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEE
Confidence 46788998753 47777778899999999877543 333 356799999999 87877754 44 4999999877654
Q ss_pred eeecccc-CCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 93 AIFGGVE-GHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 93 ~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
....... .....+.+++++|+|+++++...+ +...+|.+.+++.. .+.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~-~~~-------------------------- 175 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT-KLF-------------------------- 175 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE-EEE--------------------------
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEE-Eee--------------------------
Confidence 3321001 113468999999999876654422 22344443333321 110
Q ss_pred ccccCcceeEEEEc--CCEE-EEecCCCeEEEecCC--CC-CccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 168 RDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPG--RL-EDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
.+......++|+ ++.+ ++.+.++.|.+||+. ++ ... ....+..+........ .+..+++|.+.
T Consensus 176 --~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~-------~~~~~~~~~~~~~~p~--gi~~d~~G~lw 244 (326)
T 2ghs_A 176 --ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG-------KAEVFIDSTGIKGGMD--GSVCDAEGHIW 244 (326)
T ss_dssp --EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS-------CCEEEEECTTSSSEEE--EEEECTTSCEE
T ss_pred --CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc-------CceEEEECCCCCCCCC--eeEECCCCCEE
Confidence 012235678887 5555 445567899999975 33 210 0011222222222222 45667889877
Q ss_pred EEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc-cCCceee
Q psy10348 242 AVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS-KNGNVLL 290 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~ 290 (291)
++...++.|..||. +++ ....+.. ....+.+++|+ |+++.|.
T Consensus 245 va~~~~~~v~~~d~-~g~----~~~~i~~--~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 245 NARWGEGAVDRYDT-DGN----HIARYEV--PGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp EEEETTTEEEEECT-TCC----EEEEEEC--SCSBEEEEEEESTTSCEEE
T ss_pred EEEeCCCEEEEECC-CCC----EEEEEEC--CCCCcEEEEEecCCCCEEE
Confidence 77766788999998 343 2233332 23568999998 8887663
No 209
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.46 E-value=2.5e-11 Score=96.43 Aligned_cols=233 Identities=11% Similarity=0.035 Sum_probs=136.3
Q ss_pred CEEEEecCCCeEEEEccCCc----ceeEEEe------e-eccceeEEEEecCCCcEEEEeecC------CeEEEEECCCc
Q psy10348 27 PLLAVAGSRAVIRIFSPAFH----ACVRHFY------G-HGHAINELKFHPQDFNLLLSVSKD------HTLRLWNIKTD 89 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~ 89 (291)
.+++.+..++.|+|+|+.+. +..++++ . -...-..+...| ++ +++++..+ |.|.+.|.+++
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 45666778899999998755 5555553 0 111345577889 77 77776555 78999999999
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEe-------------------cCCcEEEEeccCchhhhhhccccccCCCC
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-------------------MDHSLKLWDLTKPEIKDACAESYTFNPAR 150 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 150 (291)
+.+..+..-......-+.+-|+|+++.++++. .+.+|.+||+.+++.++++...
T Consensus 175 ~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg------- 247 (462)
T 2ece_A 175 EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG------- 247 (462)
T ss_dssp CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC-------
T ss_pred eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC-------
Confidence 98888732111122345688899999888885 3689999999987655544310
Q ss_pred ccccccCccccCcccccccccCcceeEEEE--c--CCEEEEec------CCCeEEEecCCCCCccccccCC-Cceeeeee
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRW--L--GDFVLSKS------CENCIICWKPGRLEDKELRTNE-TNVTIINR 219 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~ 219 (291)
........+.| + ++++++++ .+++|.+|....+.......-. ...+....
T Consensus 248 -------------------~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 248 -------------------EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp -------------------TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS
T ss_pred -------------------CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc
Confidence 01122345555 4 55555554 5678877665432110000000 00000000
Q ss_pred e---c----CCcccEEEEEEEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEecccc------------ccceee
Q psy10348 220 L---N----FKDCEIWFIRFSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRC------------MSAVRQ 279 (291)
Q Consensus 220 ~---~----~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~------------~~~v~~ 279 (291)
+ . ..... ...+..++||++|+++. ..+.|.+||+...... ++...+...+. .+....
T Consensus 309 lp~~~~~f~~~~~~--pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~-~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 309 LPEILKPFKAVPPL--VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP-VLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp CCGGGGGGTEECCC--CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC-EEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred ccccccccccCCCc--eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-EEEEEEEeCCeeccccccccccCCCCCCE
Confidence 0 0 00111 23455668899998877 5789999999744322 22222221110 124688
Q ss_pred eEEccCCceee
Q psy10348 280 TTLSKNGNVLL 290 (291)
Q Consensus 280 ~~~s~~g~~l~ 290 (291)
++++|||++|.
T Consensus 386 ~~lSpDGk~Ly 396 (462)
T 2ece_A 386 LEISRDGRRVY 396 (462)
T ss_dssp EEECTTSSEEE
T ss_pred EEEcCCCCEEE
Confidence 99999999886
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=4.3e-11 Score=103.06 Aligned_cols=224 Identities=10% Similarity=0.027 Sum_probs=132.6
Q ss_pred ceeEEEEeeeccCCCCCEEEE-----ecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCC------
Q psy10348 11 ENFYTCAWSMDLESGRPLLAV-----AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH------ 79 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~-----~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg------ 79 (291)
..+..++||||++ +||. |+....|++||+++++.+... .+......++|+ |++.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~----~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 129 TALDQLSFSRDGR----ILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL--GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp CEEEEEEECTTSS----EEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE--TTTEEEEEESSCCC----
T ss_pred EEEEEEEECCCCC----EEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe--CCCEEEEEEecCcccccc
Confidence 4688889999994 7774 333468999999999865431 111123678899 556666666553
Q ss_pred -------eEEEEECCCcce--eeeeccccC-CCCceEEEEEccCCCEEEEEec----CCcEEEEeccCchh-hhhhcccc
Q psy10348 80 -------TLRLWNIKTDIC--IAIFGGVEG-HRDEVLSADFDLLGTKIMSCGM----DHSLKLWDLTKPEI-KDACAESY 144 (291)
Q Consensus 80 -------~i~vwd~~~~~~--~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~-~~~~~~~~ 144 (291)
.|++|++.++.. ...+. ... |......+.|+|+|++|+.... +..|+++|+.++.. ...+.
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~--- 277 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFG-AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ--- 277 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEES-CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE---
T ss_pred cccCCCcEEEEEECCCCcccceEEEe-cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe---
Confidence 499999987643 22331 123 4456788999999998765443 35899999877631 11111
Q ss_pred ccCCCCccccccCccccCcccccccccCcceeE-EEEcCCE-EEEecCC---CeEEEecCCCCCccccccCCCceeeeee
Q psy10348 145 TFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC-VRWLGDF-VLSKSCE---NCIICWKPGRLEDKELRTNETNVTIINR 219 (291)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~-l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (291)
.+...... +...++. ++....+ +.|..+|+.+.... ....
T Consensus 278 -------------------------~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----------~~~~ 322 (693)
T 3iuj_A 278 -------------------------GDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA----------HWRD 322 (693)
T ss_dssp -------------------------CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG----------GCEE
T ss_pred -------------------------CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----------ccEE
Confidence 12222222 2223554 3444333 68999998875431 0223
Q ss_pred ecCCcccEEEEEEEecCCCcEEEEEcC-CC--cEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 220 LNFKDCEIWFIRFSMDYWQKILAVGNQ-SG--RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+..+...+. .+++ ++++|+.... ++ .|++|++..+. ...+.. ...+.+..+.++++++.|+
T Consensus 323 l~~~~~~~~--~~s~--~g~~lv~~~~~~g~~~l~~~d~~g~~-----~~~l~~-p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 323 LIPERQQVL--TVHS--GSGYLFAEYMVDATARVEQFDYEGKR-----VREVAL-PGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp EECCCSSCE--EEEE--ETTEEEEEEEETTEEEEEEECTTSCE-----EEEECC-SSSSEEEECCCCTTCSCEE
T ss_pred EecCCCCEE--EEEE--ECCEEEEEEEECCeeEEEEEECCCCe-----eEEeec-CCCceEEeeecCCCCCEEE
Confidence 333433332 4554 4887776664 44 68899887542 123322 2334677788888887654
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.44 E-value=1.2e-11 Score=99.04 Aligned_cols=233 Identities=7% Similarity=-0.058 Sum_probs=140.1
Q ss_pred CeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcceeeeeccc-cC---C
Q psy10348 36 AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDICIAIFGGV-EG---H 101 (291)
Q Consensus 36 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~-~~---~ 101 (291)
+.|.++|..+++.+..+..-..+ .++++| +++.++++. .++.|.++|..+++.+..+..- .. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 79999999999999999865555 899999 888777775 3678999999999888776310 00 1
Q ss_pred CCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccc-------------cccCCCCccccccCccccCccc-
Q psy10348 102 RDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAES-------------YTFNPARSTRPFDTQKEHFPQF- 165 (291)
Q Consensus 102 ~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~- 165 (291)
......+.++|+|++++++.. ++.|.+.|+.+++.+.++... +.+.+++....+..........
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 234567899999999998874 578999999999887766531 1122222222222100000000
Q ss_pred -ccccccCcce-eEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC----------CcccEEEEE
Q psy10348 166 -STRDIHRNYV-DCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF----------KDCEIWFIR 231 (291)
Q Consensus 166 -~~~~~~~~~v-~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~ 231 (291)
........++ ..+.+. +..++..+..+.+.+.|....... .+..+.. .......+
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~----------v~~~~~~~~~~~i~~g~~p~g~~~v- 324 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGAT----------FRAPIEALTEAERADDWRPGGWQQT- 324 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEE----------ECCCEESSCTTTGGGTEEECSSSCE-
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceE----------EeeeeeeccccccccccccCCceee-
Confidence 0000001111 123344 444444556788999988654321 1111110 00000112
Q ss_pred EEecCCCcEEEEEcC----------CCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCc-eee
Q psy10348 232 FSMDYWQKILAVGNQ----------SGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGN-VLL 290 (291)
Q Consensus 232 ~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 290 (291)
.++|+++.+++... ++.|.++|+.+.+.+ ..+.. .....+++|+|||+ +|+
T Consensus 325 -a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv----~~I~v---g~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 325 -AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI----NKIEL---GHEIDSINVSQDAEPLLY 386 (426)
T ss_dssp -EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEEE---EEEECEEEECCSSSCEEE
T ss_pred -EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE----EEEEC---CCCcCeEEEccCCCEEEE
Confidence 34566887777642 357999999998643 22221 12578899999999 664
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=2.2e-10 Score=88.71 Aligned_cols=224 Identities=10% Similarity=-0.013 Sum_probs=136.2
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
........+|+|+++ .+++++..++.|..|+. +++ ...+..+...+..+++++ +++++++...++.|.+|+..
T Consensus 43 ~~~~~egp~~~~~g~---~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 43 QATWSEGPAWWEAQR---TLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp CCSSEEEEEEEGGGT---EEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred CCcCccCCeEeCCCC---EEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-
Confidence 345567889999984 37788888899999997 455 445555667789999999 88877665566889999986
Q ss_pred cceeeeeccccC-CCCceEEEEEccCCCEEEE----Eec-------------CCcEEEEeccCchhhhhhccccccCCCC
Q psy10348 89 DICIAIFGGVEG-HRDEVLSADFDLLGTKIMS----CGM-------------DHSLKLWDLTKPEIKDACAESYTFNPAR 150 (291)
Q Consensus 89 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 150 (291)
++.........+ ....+..++++++|+++++ |.. .+.|..+|..+++.....
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---------- 185 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---------- 185 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----------
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----------
Confidence 553332211111 1234678999999998776 332 245666666555422110
Q ss_pred ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCC------CeEEEecCCCCCccccccCCCceeeeeeecC
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCE------NCIICWKPGRLEDKELRTNETNVTIINRLNF 222 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
.......++|+ ++.|+.+... +.|.+|++...... . .......
T Consensus 186 --------------------~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~---~----~~~~~~~-- 236 (305)
T 3dr2_A 186 --------------------DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALH---D----RRHFASV-- 236 (305)
T ss_dssp --------------------EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEE---E----EEEEECC--
T ss_pred --------------------cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCcc---C----CeEEEEC--
Confidence 11234567887 5566666554 78999987643210 0 0111111
Q ss_pred CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 223 KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 223 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
...... .+..+++|+ |.+++.+| |.+|+... + ....+..+ ..+.+++|+|+++.|.
T Consensus 237 ~~~~pd--gi~~d~~G~-lwv~~~~g-v~~~~~~g-~----~~~~~~~~---~~~~~~~f~~d~~~L~ 292 (305)
T 3dr2_A 237 PDGLPD--GFCVDRGGW-LWSSSGTG-VCVFDSDG-Q----LLGHIPTP---GTASNCTFDQAQQRLF 292 (305)
T ss_dssp SSSCCC--SEEECTTSC-EEECCSSE-EEEECTTS-C----EEEEEECS---SCCCEEEECTTSCEEE
T ss_pred CCCCCC--eEEECCCCC-EEEecCCc-EEEECCCC-C----EEEEEECC---CceeEEEEeCCCCEEE
Confidence 111111 245677788 44555554 99999843 2 22333322 2588999999987664
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.38 E-value=4.2e-10 Score=89.45 Aligned_cols=217 Identities=9% Similarity=-0.056 Sum_probs=130.2
Q ss_pred EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEeec
Q psy10348 15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVSK 77 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~ 77 (291)
.++++||+ ++++++. .++.|.+||..+.+.+..+... ......+.|+| ++++|++++.
T Consensus 70 ~i~~spDg----~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~ 144 (373)
T 2mad_H 70 NPVAAHSG----SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQF 144 (373)
T ss_pred CeEECCCC----CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEec
Confidence 88999998 4777774 3678999999998888776532 12345789999 8899888874
Q ss_pred --CCeEEEEECCCcceeee-eccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhhhcc-----------
Q psy10348 78 --DHTLRLWNIKTDICIAI-FGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDACAE----------- 142 (291)
Q Consensus 78 --dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~----------- 142 (291)
++.|.++| .+++.+.. + . ... ++.+.|++ +.+++.+.||.+.++|. +++.......
T Consensus 145 ~~~~~v~viD-~t~~~~~~~i---~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~ 215 (373)
T 2mad_H 145 AAGPAVGLVV-QGGSSDDQLL---S-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL 215 (373)
T ss_pred CCCCeEEEEE-CCCCEEeEEc---C-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee
Confidence 47899999 99988777 5 2 222 23445555 35566777999999999 7665522110
Q ss_pred -ccccCCCCccccccCccccC----------ccccccc----------ccCcceeEEEEc--CCEEEEecC---------
Q psy10348 143 -SYTFNPARSTRPFDTQKEHF----------PQFSTRD----------IHRNYVDCVRWL--GDFVLSKSC--------- 190 (291)
Q Consensus 143 -~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----------~~~~~v~~~~~~--~~~l~~~~~--------- 190 (291)
...+.+.+....+....... ....... -.......+.++ ++.+++...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~ 295 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHA 295 (373)
T ss_pred ecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccC
Confidence 00011111110110000000 0000000 001112235555 455555432
Q ss_pred -CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEEc-CCCcEEEEEcCCCCC
Q psy10348 191 -ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVGN-QSGRTYVWDLDVQDP 260 (291)
Q Consensus 191 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~ 260 (291)
++.|.++|+.+.+. +.++.... ..+ .+.++|||+ +++++. .++.|.+||+.+++.
T Consensus 296 ~~~~V~VID~~t~~v------------v~~i~~g~-~p~--~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 296 AAKEVTSVTGLVGQT------------SSQISLGH-DVD--AISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCCeEEEEECCCCEE------------EEEEECCC-CcC--eEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 35799999988743 55554433 233 345567799 777777 589999999999864
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=4.6e-10 Score=87.12 Aligned_cols=200 Identities=9% Similarity=0.041 Sum_probs=125.4
Q ss_pred cceeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCcceeEE-Eee----eccceeEEEEecCCCcEEEEeecC-----
Q psy10348 10 EENFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYG----HGHAINELKFHPQDFNLLLSVSKD----- 78 (291)
Q Consensus 10 ~~~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~s~~~d----- 78 (291)
...+.+++++++ + .++++. ..+.|.+||.+ ++.... ... ....+.++++.+ +++++++...+
T Consensus 70 ~~~~~~i~~~~~~g----~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~ 142 (314)
T 1pjx_A 70 GGIPAGCQCDRDAN----QLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPA 142 (314)
T ss_dssp ECCEEEEEECSSSS----EEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTS
T ss_pred CCCCceEEEecCCC----cEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccc
Confidence 356888999988 6 244444 34579999988 664332 211 123588999999 88887776655
Q ss_pred ----------CeEEEEECCCcceeeeeccccCCCCceEEEEEc----cCCCEEEEE-ecCCcEEEEecc-Cchhhhhhcc
Q psy10348 79 ----------HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD----LLGTKIMSC-GMDHSLKLWDLT-KPEIKDACAE 142 (291)
Q Consensus 79 ----------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~i~v~d~~-~~~~~~~~~~ 142 (291)
+.|..||.. ++..... .+......++|+ |+++.++.+ ..++.|.+||+. .++.... .
T Consensus 143 ~~~~~~~~~~~~l~~~~~~-g~~~~~~----~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~-~- 215 (314)
T 1pjx_A 143 DYTRSMQEKFGSIYCFTTD-GQMIQVD----TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK-K- 215 (314)
T ss_dssp CCCBTTSSSCEEEEEECTT-SCEEEEE----EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE-E-
T ss_pred cccccccCCCCeEEEECCC-CCEEEec----cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc-e-
Confidence 567777765 5543332 333456889999 999766555 567899999986 3321100 0
Q ss_pred ccccCCCCccccccCccccCcccccccccC-cceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee
Q psy10348 143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHR-NYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR 219 (291)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (291)
.+.....+. .....++++ |+++++...++.|.+||..+++. +..
T Consensus 216 ---------------------~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~------------~~~ 262 (314)
T 1pjx_A 216 ---------------------VWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP------------KMR 262 (314)
T ss_dssp ---------------------EEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC------------SEE
T ss_pred ---------------------EEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE------------eEE
Confidence 000001122 446778887 66777766788999999875533 233
Q ss_pred ecCCcccEEEEEEEecCCCcEEEE-EcCCCcEEEEEcCCC
Q psy10348 220 LNFKDCEIWFIRFSMDYWQKILAV-GNQSGRTYVWDLDVQ 258 (291)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~ 258 (291)
+..+...+..++ ++|+++.|++ ...++.|..|++...
T Consensus 263 ~~~~~~~~~~i~--~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 263 IRCPFEKPSNLH--FKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EECSSSCEEEEE--ECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EeCCCCCceeEE--ECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 333434444444 4688985554 456788999998753
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.33 E-value=3.6e-10 Score=89.06 Aligned_cols=236 Identities=12% Similarity=0.052 Sum_probs=139.9
Q ss_pred EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeeec-------cceeEEEEecCCCcEEEEeec
Q psy10348 15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGHG-------HAINELKFHPQDFNLLLSVSK 77 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~s~~~ 77 (291)
.++++|++. +++++. .++.|.+||..+++.+..+.... .....++|+| ++++++++..
T Consensus 82 ~va~spDG~----~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~ 156 (386)
T 3sjl_D 82 NPVVADDGS----FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQF 156 (386)
T ss_dssp EEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEEC
T ss_pred cEEECCCCC----EEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEc
Confidence 399999985 666654 36789999999999988886321 2456799999 8888888764
Q ss_pred --CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC-chhhhhhccccccCCCC----
Q psy10348 78 --DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK-PEIKDACAESYTFNPAR---- 150 (291)
Q Consensus 78 --dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~---- 150 (291)
++.|.++|+.+++.+..+. -. + . ...+....+.+++.+.||++.+.++.. ++...... ..+.+..
T Consensus 157 ~~~~~VsVID~~t~~vv~tI~---v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~--~~~~~~~~~~~ 228 (386)
T 3sjl_D 157 SPAPAVGVVDLEGKAFKRMLD---VP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT--EVFHPEDEFLI 228 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEEE---CC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC--CCCSCTTSCBC
T ss_pred CCCCeEEEEECCCCcEEEEEE---CC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec--ceecccccccc
Confidence 6899999999999888873 11 1 1 222333345677777788888888865 44321111 0111111
Q ss_pred ---------ccccccCccccCcccc----------ccc----------ccCcceeEEEEc--CCEEEEecC---------
Q psy10348 151 ---------STRPFDTQKEHFPQFS----------TRD----------IHRNYVDCVRWL--GDFVLSKSC--------- 190 (291)
Q Consensus 151 ---------~~~~~~~~~~~~~~~~----------~~~----------~~~~~v~~~~~~--~~~l~~~~~--------- 190 (291)
....|.+..+....+. ... -.......++++ ++.++....
T Consensus 229 ~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 229 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred ccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 0111111111000000 000 011122335555 455555431
Q ss_pred -CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEE-cCCCcEEEEEcCCCCCCcceeEE
Q psy10348 191 -ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVG-NQSGRTYVWDLDVQDPSSIKFQI 267 (291)
Q Consensus 191 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~-~~dg~i~vwd~~~~~~~~~~~~~ 267 (291)
.+.|.++|+.+.+. +.++.... .++. +.+++|++ +|++. ..++.|.++|..+++ ....
T Consensus 309 ~~~~V~viD~~t~kv------------~~~i~vg~-~~~~--lavs~D~~~~ly~tn~~~~~VsViD~~t~k----~~~~ 369 (386)
T 3sjl_D 309 ASRFVVVLDAKTGER------------LAKFEMGH-EIDS--INVSQDEKPLLYALSTGDKTLYIHDAESGE----ELRS 369 (386)
T ss_dssp CEEEEEEEETTTCCE------------EEEEEEEE-EECE--EEECSSSSCEEEEEETTTTEEEEEETTTCC----EEEE
T ss_pred CCCEEEEEECCCCeE------------EEEEECCC-Ccce--EEECCCCCeEEEEEcCCCCeEEEEECCCCc----EEEE
Confidence 36799999988854 55554332 3344 44556686 66664 568999999999985 3344
Q ss_pred EeccccccceeeeEEccC
Q psy10348 268 LSHPRCMSAVRQTTLSKN 285 (291)
Q Consensus 268 ~~~~~~~~~v~~~~~s~~ 285 (291)
+...+ ..+.|.+++|
T Consensus 370 i~~~~---~p~~l~~s~d 384 (386)
T 3sjl_D 370 VNQLG---HGPQVITTAD 384 (386)
T ss_dssp ECCCC---SSCCEEEECC
T ss_pred ecCCC---CCceeEECCc
Confidence 44433 4566788887
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=3e-09 Score=83.73 Aligned_cols=260 Identities=11% Similarity=-0.009 Sum_probs=144.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEec--CCCeEEEEccCCcceeEEE-------eeeccceeEEEEecCCCcEEEEeec----
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAG--SRAVIRIFSPAFHACVRHF-------YGHGHAINELKFHPQDFNLLLSVSK---- 77 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~s~~~---- 77 (291)
.....+++++++ +++++.. .++.++||.+.+++.. .+ ..+-..+..+++.+ +++++++-..
T Consensus 17 ~~p~~va~~~~g----~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDG----RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTS----CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHT
T ss_pred CCcceEEECCCC----CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcC
Confidence 578899999988 4777753 2343566665455432 22 12446789999999 7777665443
Q ss_pred -CCeEEEEECCCcceeeeecc---ccCCCCceEEEEEccCCCEE-EEEe---cCCcEEEEeccCchhhhhhccccccCCC
Q psy10348 78 -DHTLRLWNIKTDICIAIFGG---VEGHRDEVLSADFDLLGTKI-MSCG---MDHSLKLWDLTKPEIKDACAESYTFNPA 149 (291)
Q Consensus 78 -dg~i~vwd~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l-~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 149 (291)
++.|.+||+.+++.+..+.. ...+...+..+++++++..+ ++-. .++.|.+||+.+++..+.+..+....+.
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 57899999998886665521 01223456899999865554 4444 5789999999887754443221111111
Q ss_pred CccccccCccccCcccc--cccc----cCcceeEEEEc--CCEEEEecCCC-eEEEecCCCCCccccccCCCceeeeeee
Q psy10348 150 RSTRPFDTQKEHFPQFS--TRDI----HRNYVDCVRWL--GDFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINRL 220 (291)
Q Consensus 150 ~~~~~~~~~~~~~~~~~--~~~~----~~~~v~~~~~~--~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 220 (291)
....... .. .+. ...+ -...+..++++ ++.|+.+..++ .+..++............. ....+...
T Consensus 171 ~~~~~~~---g~--~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~ 244 (343)
T 2qe8_A 171 DIDLVID---GV--PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE-LGSKIERY 244 (343)
T ss_dssp SCCCEET---TE--ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH-HHTTCEEE
T ss_pred ccceeEC---CE--EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh-hhcceEec
Confidence 1000000 00 000 0000 01236778898 66777766555 5555543211100000000 00000000
Q ss_pred cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 221 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
++..... .++++++|.++++...++.|.+||..+++ ....... .....+.+++|+++|++++
T Consensus 245 -g~~g~pd--gia~d~~G~l~va~~~~~~V~~~d~~~G~----~~~~~~~-~~~~~p~~va~~~~g~l~v 306 (343)
T 2qe8_A 245 -SEKPICD--GISIDKDHNIYVGDLAHSAIGVITSADRA----YKLLVTD-EKLSWTDSFNFGSDGYLYF 306 (343)
T ss_dssp -EECCSCS--CEEECTTCCEEEEEGGGTEEEEEETTTTE----EEEEEEC-GGGSCEEEEEECTTSCEEE
T ss_pred -ccCCCCc--eEEECCCCCEEEEccCCCeEEEEECCCCC----EEEEEEC-CceecCCeeEECCCCcEEE
Confidence 1111111 25667889999999999999999985542 2222222 2345688999999998765
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.30 E-value=7.1e-10 Score=87.40 Aligned_cols=103 Identities=8% Similarity=-0.142 Sum_probs=78.7
Q ss_pred EEEEecCCC----eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEee----------cCCeEEEEECCCcceee
Q psy10348 28 LLAVAGSRA----VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS----------KDHTLRLWNIKTDICIA 93 (291)
Q Consensus 28 ~l~~~~~dg----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~ 93 (291)
.+++-..++ .|.++|..+++.+.++..-..+ .+.++| ++++++++. .++.|.+||+.+++.+.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 444444445 8899999999999999865566 799999 888888876 36889999999999988
Q ss_pred eeccccCC----CCceEEEEEccCCCEEEEEec--CCcEEE--EeccC
Q psy10348 94 IFGGVEGH----RDEVLSADFDLLGTKIMSCGM--DHSLKL--WDLTK 133 (291)
Q Consensus 94 ~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~--d~~i~v--~d~~~ 133 (291)
.+..-.+. ......++++|+|++++++.. +..+.+ +|+.+
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 87310000 134567999999999998874 467888 99876
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.28 E-value=6.1e-09 Score=80.23 Aligned_cols=192 Identities=11% Similarity=0.021 Sum_probs=118.0
Q ss_pred eecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee----eccceeEEEEecCCCcEEEEeecC-----
Q psy10348 8 LIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG----HGHAINELKFHPQDFNLLLSVSKD----- 78 (291)
Q Consensus 8 ~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~~d----- 78 (291)
.....+.++++++++ .++++ . ++.|.+||.++++....... ....+..+++.| +++++++...+
T Consensus 51 ~~~~~~~~i~~~~dG----~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 51 TMDAPVSSVALRQSG----GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPA 123 (297)
T ss_dssp ECSSCEEEEEEBTTS----SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTT
T ss_pred eCCCceEEEEECCCC----CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccc
Confidence 345778899999988 45554 3 56899999987765433221 123578899999 88877754322
Q ss_pred ----CeEEEEECCC-cceeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEecc--CchhhhhhccccccCCCC
Q psy10348 79 ----HTLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLT--KPEIKDACAESYTFNPAR 150 (291)
Q Consensus 79 ----g~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~--~~~~~~~~~~~~~~~~~~ 150 (291)
..-.||.+.. ++..... ........++|+|+++.|+. .+.++.|.+||+. ++..... .
T Consensus 124 ~~~~~~~~l~~~d~~g~~~~~~----~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~-~--------- 189 (297)
T 3g4e_A 124 VLERHQGALYSLFPDHHVKKYF----DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR-R--------- 189 (297)
T ss_dssp BCCTTCEEEEEECTTSCEEEEE----EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE-E---------
T ss_pred cccCCCcEEEEEECCCCEEEEe----eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc-E---------
Confidence 2234555443 3333222 33445688999999987654 4557889999973 4432100 0
Q ss_pred ccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW 228 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (291)
.+.....+......++++ |++.++...++.|..||..+++. +..+..+...+.
T Consensus 190 -------------~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~------------~~~i~~p~~~~t 244 (297)
T 3g4e_A 190 -------------SVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR------------LQTVKLPVDKTT 244 (297)
T ss_dssp -------------EEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE------------EEEEECSSSBEE
T ss_pred -------------EEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE------------EEEEECCCCCce
Confidence 000001123456778887 66666666778999999987643 556665655666
Q ss_pred EEEEEecCCCcEEEEEcC
Q psy10348 229 FIRFSMDYWQKILAVGNQ 246 (291)
Q Consensus 229 ~~~~~~~~~~~~l~~~~~ 246 (291)
.++|. .|+++.|++++.
T Consensus 245 ~~~f~-g~d~~~L~vt~~ 261 (297)
T 3g4e_A 245 SCCFG-GKNYSEMYVTCA 261 (297)
T ss_dssp EEEEE-SGGGCEEEEEEB
T ss_pred EEEEe-CCCCCEEEEEcC
Confidence 66665 145676665553
No 219
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.26 E-value=2.2e-10 Score=99.48 Aligned_cols=195 Identities=9% Similarity=-0.014 Sum_probs=120.8
Q ss_pred EEEEeeeccCCCCCEEEEecCCC--------------eEEEEccCCcce--eEEEee--eccceeEEEEecCCCcEEEEe
Q psy10348 14 YTCAWSMDLESGRPLLAVAGSRA--------------VIRIFSPAFHAC--VRHFYG--HGHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 14 ~~~~~s~~~~~~~~~l~~~~~dg--------------~i~vw~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~l~s~ 75 (291)
..++|+|| . .|+.++.++ .|++|++.++.. ...+.. +...+..+.|+| ++++|+..
T Consensus 212 ~~~~wspD-~----~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~ 285 (741)
T 1yr2_A 212 SGLAWLGN-D----ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVIT 285 (741)
T ss_dssp CCCEESTT-S----EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEE
T ss_pred ccEEEECC-C----EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEE
Confidence 57889988 6 666666544 389999987653 222332 223578999999 88888877
Q ss_pred ecCC-----eEEEEECCCc--ceeeeeccccCCCCceEEEEEccCCCEEEEEecC----CcEEEEeccCch-hhhhhccc
Q psy10348 76 SKDH-----TLRLWNIKTD--ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD----HSLKLWDLTKPE-IKDACAES 143 (291)
Q Consensus 76 ~~dg-----~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~-~~~~~~~~ 143 (291)
+.++ .|.+||+.++ +....+ ..+...+.... +|+|+.|+..+.+ +.|.+||+.++. ....+.
T Consensus 286 ~~~~~~~~~~l~~~d~~~~~~~~~~~l---~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-- 359 (741)
T 1yr2_A 286 SSEGTDPVNTVHVARVTNGKIGPVTAL---IPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-- 359 (741)
T ss_dssp EECTTCSCCEEEEEEEETTEECCCEEE---ECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE--
T ss_pred EEccCCCcceEEEEECCCCCCcccEEe---cCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe--
Confidence 6544 8999999876 313344 34444444443 4889988887763 459999987642 111110
Q ss_pred cccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCC-CCCccccccCCCceeeeeeec
Q psy10348 144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPG-RLEDKELRTNETNVTIINRLN 221 (291)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 221 (291)
..+...+..+.+. +.++++...|+..++|.+. .+. ....+.
T Consensus 360 -------------------------~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~------------~~~~l~ 402 (741)
T 1yr2_A 360 -------------------------PESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGK------------PAGAVS 402 (741)
T ss_dssp -------------------------CCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSC------------EEEECB
T ss_pred -------------------------cCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC------------ceeecc
Confidence 1133446677777 5577777888887777553 221 133343
Q ss_pred CC-cccEEEEEEEecCCCcEEEEE----cCCCcEEEEEcCCCC
Q psy10348 222 FK-DCEIWFIRFSMDYWQKILAVG----NQSGRTYVWDLDVQD 259 (291)
Q Consensus 222 ~~-~~~i~~~~~~~~~~~~~l~~~----~~dg~i~vwd~~~~~ 259 (291)
.+ ...+. .++++|++..|+.. ...++|++||+.+++
T Consensus 403 ~~~~~~v~--~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 403 LPGIGSAS--GLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CSSSCEEE--EEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCeEEE--EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 32 33333 45556677766532 345789999998764
No 220
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.22 E-value=1.8e-08 Score=74.52 Aligned_cols=188 Identities=10% Similarity=0.084 Sum_probs=121.0
Q ss_pred eeEEEeeeccc--eeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-c
Q psy10348 48 CVRHFYGHGHA--INELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-M 122 (291)
Q Consensus 48 ~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~ 122 (291)
.++++. |... ...|.|+ ++.++.+.+.+| .|+++|+++++.+..+. - ..........+++..|+... .
T Consensus 33 vv~~~p-hd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~---l-~~~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE---L-GKRYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE---C-CTTCCEEEEEEETTEEEEEESS
T ss_pred EEEEec-CCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe---c-CCccceeEEEEeCCEEEEEEee
Confidence 445553 5443 4788888 457777777776 89999999999888772 2 22333322333455665555 4
Q ss_pred CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCC
Q psy10348 123 DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRL 202 (291)
Q Consensus 123 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (291)
++.+.+||..+.+.+.++.. ...=..++++++.|+.+..++.|.++|..+.
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~-----------------------------~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNY-----------------------------DGEGWGLTHNDQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp SSEEEEEETTTCCEEEEEEC-----------------------------SSCCCCEEECSSCEEECCSSSEEEEECTTTC
T ss_pred CCEEEEEECccCcEEEEEEC-----------------------------CCCceEEecCCCEEEEECCCCeEEEEcCCCC
Confidence 88999999999998776641 1112356677776666666889999999887
Q ss_pred CccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccc----
Q psy10348 203 EDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC---- 273 (291)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---- 273 (291)
+. +.++.... ..++-+.+. +|+..+..-.++.|.+.|..+++.. ..+...+.
T Consensus 157 ~v------------~~~I~V~~~g~~~~~lNELe~~---~G~lyan~w~~~~I~vIDp~tG~V~----~~Id~~~L~~~~ 217 (262)
T 3nol_A 157 TP------------VRTITVTAHGEELPELNELEWV---DGEIFANVWQTNKIVRIDPETGKVT----GIIDLNGILAEA 217 (262)
T ss_dssp SE------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSEEEEECTTTCBEE----EEEECTTGGGGS
T ss_pred eE------------EEEEEeccCCccccccceeEEE---CCEEEEEEccCCeEEEEECCCCcEE----EEEECCcCcccc
Confidence 54 33333211 122234443 3766666667889999999998543 33332211
Q ss_pred ------ccceeeeEEccCCceee
Q psy10348 274 ------MSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 274 ------~~~v~~~~~s~~g~~l~ 290 (291)
....+.|||+|+++.|.
T Consensus 218 ~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 218 GPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp CSCCSSCCCEEEEEEETTTTEEE
T ss_pred ccccCcCCceEEEEEcCCCCEEE
Confidence 23568999999887664
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=5.5e-09 Score=82.22 Aligned_cols=207 Identities=9% Similarity=0.023 Sum_probs=125.1
Q ss_pred cceeEEEEeeeccCCCCCEEEEecC-----CCeEEEEccCCcceeEEEeee------ccceeEEEEecCCCcEEEEee--
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGS-----RAVIRIFSPAFHACVRHFYGH------GHAINELKFHPQDFNLLLSVS-- 76 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~-----dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~-- 76 (291)
-..+.++++.+++ .++++-.. ++.|.+||+.+++.+..+... ...+..+++.+.++..+++..
T Consensus 66 ~~~p~gv~~d~~g----~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 66 FDTVLGIKSDGNG----IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CSCEEEEEECSSS----EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred eeEeeEEEEcCCC----cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence 4578899999987 35555433 578999999999877776532 234689999984455556655
Q ss_pred -cCCeEEEEECCCcceeeeeccccCC-----------------------------CCceEEEEEccCCCEEEEEecCCcE
Q psy10348 77 -KDHTLRLWNIKTDICIAIFGGVEGH-----------------------------RDEVLSADFDLLGTKIMSCGMDHSL 126 (291)
Q Consensus 77 -~dg~i~vwd~~~~~~~~~~~~~~~~-----------------------------~~~i~~~~~~~~~~~l~~~~~d~~i 126 (291)
.++.|.+||+.+++....+. +| ...+..++|+|+++.|+.+..++.
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~---~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~- 217 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQ---GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST- 217 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECT---TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-
T ss_pred CCCCeEEEEECCCCCEEEEec---CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-
Confidence 67899999998877655441 11 123688999999998888877663
Q ss_pred EEEeccCchhhh-hhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCC
Q psy10348 127 KLWDLTKPEIKD-ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLE 203 (291)
Q Consensus 127 ~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~ 203 (291)
++|.+....... .+.. ..... .+. ..++......++++ |+++++...++.|.+||..+++
T Consensus 218 ~l~~~~~~~~~~~~~~~---------~~~~~-------~~~-~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTD---------AELGS-------KIE-RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp EEEEEEHHHHTCTTCCH---------HHHHT-------TCE-EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred eEEEEEHHHhcCCCCCh---------hhhhc-------ceE-ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 455443221100 0000 00000 000 00123345667887 7788888889999999984432
Q ss_pred ccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEE
Q psy10348 204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD 254 (291)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd 254 (291)
. ..+.... ..... ..++++++++++++.+..+.+.+|.
T Consensus 281 ~----------~~~~~~~-~~~~p--~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 281 Y----------KLLVTDE-KLSWT--DSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp E----------EEEEECG-GGSCE--EEEEECTTSCEEEEECCGGGSGGGB
T ss_pred E----------EEEEECC-ceecC--CeeEECCCCcEEEEeCccccccccc
Confidence 1 1111111 11223 3455567788888877666655554
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.20 E-value=2.8e-08 Score=77.63 Aligned_cols=188 Identities=14% Similarity=-0.018 Sum_probs=112.0
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee---e-ccceeEEEEecCCCcEEEEeec------C
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG---H-GHAINELKFHPQDFNLLLSVSK------D 78 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~~l~s~~~------d 78 (291)
....+.+++|++++. ++++ ..+ .|.+||.++++....... . ...+..++++| +++++++... .
T Consensus 88 ~~~~v~~i~~~~dg~----l~v~-~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~ 160 (326)
T 2ghs_A 88 LPFMGSALAKISDSK----QLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGA 160 (326)
T ss_dssp CSSCEEEEEEEETTE----EEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTC
T ss_pred CCCcceEEEEeCCCe----EEEE-ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCc
Confidence 356789999999983 5554 444 499999988775432221 1 23588999999 8887765542 2
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEecc--Cc-hhhhhhccccccCCCCcccc
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLT--KP-EIKDACAESYTFNPARSTRP 154 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~--~~-~~~~~~~~~~~~~~~~~~~~ 154 (291)
+.|..++ +++..... ........++|+|+++.++.+ +.++.|.+||+. ++ ..... .
T Consensus 161 ~~l~~~~--~g~~~~~~----~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~-~------------- 220 (326)
T 2ghs_A 161 GSIYHVA--KGKVTKLF----ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA-E------------- 220 (326)
T ss_dssp EEEEEEE--TTEEEEEE----EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC-E-------------
T ss_pred eEEEEEe--CCcEEEee----CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc-e-------------
Confidence 4555556 44433222 233456789999999877555 457889999986 44 31100 0
Q ss_pred ccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEE
Q psy10348 155 FDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRF 232 (291)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 232 (291)
.+............++++ |++.++...++.|..||.. ++. +..+..+...+..+++
T Consensus 221 ---------~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~------------~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 221 ---------VFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH------------IARYEVPGKQTTCPAF 278 (326)
T ss_dssp ---------EEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE------------EEEEECSCSBEEEEEE
T ss_pred ---------EEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE------------EEEEECCCCCcEEEEE
Confidence 000000122345677776 6566655567889999973 322 4445545445555555
Q ss_pred EecCCCcEEEEEcC
Q psy10348 233 SMDYWQKILAVGNQ 246 (291)
Q Consensus 233 ~~~~~~~~l~~~~~ 246 (291)
. .++++.|++++.
T Consensus 279 ~-g~d~~~L~vt~~ 291 (326)
T 2ghs_A 279 I-GPDASRLLVTSA 291 (326)
T ss_dssp E-STTSCEEEEEEB
T ss_pred e-cCCCCEEEEEec
Confidence 4 155776655543
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.20 E-value=5.9e-09 Score=83.60 Aligned_cols=219 Identities=13% Similarity=0.059 Sum_probs=127.8
Q ss_pred EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEeec
Q psy10348 15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVSK 77 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~ 77 (291)
.++++|++. +++++. .++.|.++|..+++.+..+.-. ......+.|+| ++++++++..
T Consensus 122 gia~SpDgk----~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~ 196 (426)
T 3c75_H 122 HPVAAEDGS----FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQF 196 (426)
T ss_dssp EEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEEC
T ss_pred ceEECCCCC----EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEec
Confidence 799999985 666654 4679999999999998887632 13456789999 8888888764
Q ss_pred --CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC-CEEEEEecCCcEEEEeccCchhhhh----hc-------cc
Q psy10348 78 --DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWDLTKPEIKDA----CA-------ES 143 (291)
Q Consensus 78 --dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~----~~-------~~ 143 (291)
++.|.+.|+.+++.+..+.. + .. ....|++ +.+++.+.||.+.+.++.+++.... +. ..
T Consensus 197 ~~~~~VsVID~~t~kvv~~I~v--~--g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~ 269 (426)
T 3c75_H 197 SPAPAVGVVDLEGKTFDRMLDV--P--DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINH 269 (426)
T ss_dssp SSSCEEEEEETTTTEEEEEEEC--C--SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSC
T ss_pred CCCCeEEEEECCCCeEEEEEEc--C--Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeE
Confidence 57899999999998887731 1 11 2223332 3455555666666666644433211 00 01
Q ss_pred cccCCCCccccccCccccC-------------cccccc-----c--ccCcceeEEEEc--CCEEEEec----------CC
Q psy10348 144 YTFNPARSTRPFDTQKEHF-------------PQFSTR-----D--IHRNYVDCVRWL--GDFVLSKS----------CE 191 (291)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~-----~--~~~~~v~~~~~~--~~~l~~~~----------~d 191 (291)
..+.+++....+....... ..+... . ........++++ ++.+++.. .+
T Consensus 270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 1112222111111110000 000000 0 001111225665 45555443 24
Q ss_pred CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc-EEEEEc-CCCcEEEEEcCCCCC
Q psy10348 192 NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK-ILAVGN-QSGRTYVWDLDVQDP 260 (291)
Q Consensus 192 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~ 260 (291)
+.|.++|+.+.+. +.++.... .. ..+.++||++ ++++.. .++.|.++|+.+.+.
T Consensus 350 ~~VsVID~~T~kv------------v~~I~vg~-~P--~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 350 RFVVVLNAETGER------------INKIELGH-EI--DSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEEEEETTTCCE------------EEEEEEEE-EE--CEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CEEEEEECCCCeE------------EEEEECCC-Cc--CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 6899999998854 55554332 12 3355667798 888887 599999999999863
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=1.8e-08 Score=75.28 Aligned_cols=192 Identities=9% Similarity=-0.006 Sum_probs=121.5
Q ss_pred cceeEEEeeecc--ceeEEEEecCCCcEEEEeec--CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe
Q psy10348 46 HACVRHFYGHGH--AINELKFHPQDFNLLLSVSK--DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 46 ~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 121 (291)
.+.+.++. |.. ....+.|++ ++.++++.+. ++.|.+.|+.+++.+..+.. +.......+++. +..|+.+.
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~--g~~lyv~t 82 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTLL--NEKLYQVV 82 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEE--TTEEEEEE
T ss_pred ceEEEEEE-CCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEEe--CCEEEEEE
Confidence 34555664 443 357899999 6666555543 57999999999998887631 122222345554 55555554
Q ss_pred -cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCC
Q psy10348 122 -MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPG 200 (291)
Q Consensus 122 -~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (291)
.++.+.++|..+.+.+.++... . ..-..++++++.++++..++.|.++|..
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g---~-------------------------~~g~glt~Dg~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQ---M-------------------------KDGWGLATDGKILYGSDGTSILYEIDPH 134 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECC---S-------------------------SSCCEEEECSSSEEEECSSSEEEEECTT
T ss_pred ecCCEEEEEECCCCcEEEEEECC---C-------------------------CCeEEEEECCCEEEEECCCCeEEEEECC
Confidence 4889999999998877665310 0 1113466677766666678999999998
Q ss_pred CCCccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEeccc---
Q psy10348 201 RLEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPR--- 272 (291)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--- 272 (291)
+.+. +..+.... ...+.+.+. +++..+....++.|.+.|..+++.+ ..+...+
T Consensus 135 t~~v------------~~~I~Vg~~~~p~~~~nele~~---dg~lyvn~~~~~~V~vID~~tg~V~----~~I~~~g~~~ 195 (266)
T 2iwa_A 135 TFKL------------IKKHNVKYNGHRVIRLNELEYI---NGEVWANIWQTDCIARISAKDGTLL----GWILLPNLRK 195 (266)
T ss_dssp TCCE------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTSSEEEEEETTTCCEE----EEEECHHHHH
T ss_pred CCcE------------EEEEEECCCCcccccceeEEEE---CCEEEEecCCCCeEEEEECCCCcEE----EEEECCCccc
Confidence 8754 33333221 123344444 3766666657889999999998643 3332211
Q ss_pred --------cccceeeeEEccCCceee
Q psy10348 273 --------CMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 273 --------~~~~v~~~~~s~~g~~l~ 290 (291)
.....+.++|+|+++.|.
T Consensus 196 ~~~~~~~~~~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 196 KLIDEGFRDIDVLNGIAWDQENKRIF 221 (266)
T ss_dssp HHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred ccccccccccCceEEEEEcCCCCEEE
Confidence 113568999999988664
No 225
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.20 E-value=1.1e-08 Score=82.50 Aligned_cols=189 Identities=8% Similarity=0.037 Sum_probs=115.6
Q ss_pred cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC--cEEEEeccCc
Q psy10348 57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH--SLKLWDLTKP 134 (291)
Q Consensus 57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~ 134 (291)
.....|+|++ +++++++...++.|++||..++...... .. ..... ++|+++++.|+++..++ .|.+++...+
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~---~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVH---PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEE---ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEee---cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 3567899999 8888888777899999999877665554 22 22333 99999999999888766 7888887654
Q ss_pred hhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCC
Q psy10348 135 EIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNET 212 (291)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (291)
.....+.. .. ......+.+++++ +..|+.+..++.|..||.......
T Consensus 205 ~~~~~~g~---~~---------------------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~------- 253 (409)
T 3hrp_A 205 WAPTRIGQ---LG---------------------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT------- 253 (409)
T ss_dssp TCEEEEEE---CC---------------------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-------
T ss_pred ceeEEeee---cc---------------------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-------
Confidence 42211100 00 0022345667776 345666777889999998765431
Q ss_pred ceeeeee--ecCCcccE-EEEEEEecCC-CcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc---c---------cccc
Q psy10348 213 NVTIINR--LNFKDCEI-WFIRFSMDYW-QKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP---R---------CMSA 276 (291)
Q Consensus 213 ~~~~~~~--~~~~~~~i-~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~---------~~~~ 276 (291)
.+.. ..+..... . ..++++|+ +.++++-..++.|+.|+.... ........ + .-..
T Consensus 254 ---~~~~~~~~g~~~~~P~-~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~ 324 (409)
T 3hrp_A 254 ---LIKQLELSGSLGTNPG-PYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----CEWFCGSATQKTVQDGLREEALFAQ 324 (409)
T ss_dssp ---EEEECCCCSCCCCSSC-CEEEEETTTTEEEEEETTTTEEEEECTTCC-----EEEEEECTTCCSCBCEEGGGCBCSS
T ss_pred ---EEecccccCCCCCCcc-ccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----EEEEEeCCCCCCcCCCcccccEeCC
Confidence 1110 11111111 1 03455573 566666677889999987653 11121111 0 1134
Q ss_pred eeeeEEccCCceeeC
Q psy10348 277 VRQTTLSKNGNVLLC 291 (291)
Q Consensus 277 v~~~~~s~~g~~l~s 291 (291)
...++|+|+|+++++
T Consensus 325 P~gia~d~dG~lyva 339 (409)
T 3hrp_A 325 PNGMTVDEDGNFYIV 339 (409)
T ss_dssp EEEEEECTTCCEEEE
T ss_pred CeEEEEeCCCCEEEE
Confidence 789999999987653
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=8.1e-09 Score=88.47 Aligned_cols=111 Identities=11% Similarity=0.141 Sum_probs=78.9
Q ss_pred EEEEecC------CCeEEEEccCCcceeEEEeeeccc--------------------------------eeEEEEecCCC
Q psy10348 28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHGHA--------------------------------INELKFHPQDF 69 (291)
Q Consensus 28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~--------------------------------v~~~~~~~~~~ 69 (291)
.+++++. +|.|+.+|.++|+.+..+...... ...+++.| ++
T Consensus 176 ~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~ 254 (677)
T 1kb0_A 176 KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-EL 254 (677)
T ss_dssp EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TT
T ss_pred EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CC
Confidence 5666553 799999999999998877632211 13578888 66
Q ss_pred cEEEEeecCC-------------------eEEEEECCCcceeeeeccccCCC-------CceEEEEEccCC---CEEEEE
Q psy10348 70 NLLLSVSKDH-------------------TLRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLG---TKIMSC 120 (291)
Q Consensus 70 ~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~---~~l~~~ 120 (291)
.+++.+..++ .|..+|.++|+.+..++. ..|. ....-+....+| ..++.+
T Consensus 255 ~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~ 333 (677)
T 1kb0_A 255 NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE-TPGDNWDYTSTQPMILADIKIAGKPRKVILHA 333 (677)
T ss_dssp TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCCCSCCEEEEEEETTEEEEEEEEC
T ss_pred CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec-CCCcccccccCCCcEEEecccCCcEeeEEEEE
Confidence 7777776654 599999999999887742 1221 122233444467 678999
Q ss_pred ecCCcEEEEeccCchhhhhh
Q psy10348 121 GMDHSLKLWDLTKPEIKDAC 140 (291)
Q Consensus 121 ~~d~~i~v~d~~~~~~~~~~ 140 (291)
+.+|.++++|.++++.+...
T Consensus 334 ~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 334 PKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCCEeccc
Confidence 99999999999999987654
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.16 E-value=2.1e-08 Score=74.90 Aligned_cols=198 Identities=11% Similarity=0.024 Sum_probs=127.6
Q ss_pred eEEEEeeeccCCCCCEEEEecC--CCeEEEEccCCcceeEEEeeecc-ceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGS--RAVIRIFSPAFHACVRHFYGHGH-AINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
...+.|++++ .++++.+. ++.|+++|+.+++.+..+.-... ....+++.. +.+.++...++.+.++|..+.
T Consensus 23 ~~Gl~~~~dg----~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAEND----TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECSTT----EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeCCC----eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEECCCC
Confidence 5789999875 35554443 68999999999999888763222 223455553 355566667899999999999
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (291)
+.+..+.. + ... ...++++|+.++.+..++.|.++|..+.+....+.-... .
T Consensus 97 ~v~~~i~~--g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~-----------------------~ 148 (266)
T 2iwa_A 97 SNIKNFTH--Q-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN-----------------------G 148 (266)
T ss_dssp EEEEEEEC--C-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET-----------------------T
T ss_pred cEEEEEEC--C-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC-----------------------C
Confidence 98888731 2 111 233556888787777789999999998876655431000 0
Q ss_pred ccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-------------ccEEEEEEEec
Q psy10348 170 IHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-------------CEIWFIRFSMD 235 (291)
Q Consensus 170 ~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~i~~~~~~~~ 235 (291)
..-..++.+.|. +...+....++.|.+.|..+++. +..+.... ..... ++++
T Consensus 149 ~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V------------~~~I~~~g~~~~~~~~~~~~~~v~nG--Ia~~ 214 (266)
T 2iwa_A 149 HRVIRLNELEYINGEVWANIWQTDCIARISAKDGTL------------LGWILLPNLRKKLIDEGFRDIDVLNG--IAWD 214 (266)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCE------------EEEEECHHHHHHHHHTTCTTCCCEEE--EEEE
T ss_pred cccccceeEEEECCEEEEecCCCCeEEEEECCCCcE------------EEEEECCCcccccccccccccCceEE--EEEc
Confidence 011124566666 44444444689999999998855 34443210 12234 4455
Q ss_pred CCCc-EEEEEcCCCcEEEEEcCCC
Q psy10348 236 YWQK-ILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 236 ~~~~-~l~~~~~dg~i~vwd~~~~ 258 (291)
|+++ +++++...++|.+.++...
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCCeEEEEEEecc
Confidence 6665 4555667889999998765
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.15 E-value=3e-08 Score=85.15 Aligned_cols=103 Identities=17% Similarity=0.240 Sum_probs=73.4
Q ss_pred CCeEEEEccCCcceeEEEeee-------------------------------ccceeEEEEecCCCcEEEEeecCCe---
Q psy10348 35 RAVIRIFSPAFHACVRHFYGH-------------------------------GHAINELKFHPQDFNLLLSVSKDHT--- 80 (291)
Q Consensus 35 dg~i~vw~~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~~~~~~l~s~~~dg~--- 80 (291)
+|.|+.||.++|+.+..+..- ......+++.| +..+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccc
Confidence 789999999999998777521 01112578888 6678888877764
Q ss_pred ----------------EEEEECCCcceeeeeccccCCC-------CceEEEEEccCCC---EEEEEecCCcEEEEeccCc
Q psy10348 81 ----------------LRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLGT---KIMSCGMDHSLKLWDLTKP 134 (291)
Q Consensus 81 ----------------i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~ 134 (291)
|..+|.++|+.+..++. ..|. .+........+|+ .++.++.+|.++++|.+++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT-TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeec-CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence 99999999999887742 1121 2222223333554 7889999999999999999
Q ss_pred hhhhh
Q psy10348 135 EIKDA 139 (291)
Q Consensus 135 ~~~~~ 139 (291)
+.+..
T Consensus 340 ~~l~~ 344 (689)
T 1yiq_A 340 ELLSA 344 (689)
T ss_dssp CEEEE
T ss_pred CEecc
Confidence 97643
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.13 E-value=5e-09 Score=86.27 Aligned_cols=264 Identities=11% Similarity=0.067 Sum_probs=146.0
Q ss_pred EEeee-ccCCCCCEEEEec-CCCeEEEEccCCcceeEEEeee-ccceeEEEE-e-cCCCcEEEEee--------------
Q psy10348 16 CAWSM-DLESGRPLLAVAG-SRAVIRIFSPAFHACVRHFYGH-GHAINELKF-H-PQDFNLLLSVS-------------- 76 (291)
Q Consensus 16 ~~~s~-~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~l~s~~-------------- 76 (291)
...|. ++.+||+++++.. .++.|.+.|+++.++.+.+.-. ......+++ . | ++.+++.++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~ 168 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNME 168 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTT
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccc
Confidence 44444 3333445666655 4567999999999988855422 245778887 4 7 777777774
Q ss_pred ----cCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC---------------cEEEEeccCchhh
Q psy10348 77 ----KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH---------------SLKLWDLTKPEIK 137 (291)
Q Consensus 77 ----~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------~i~v~d~~~~~~~ 137 (291)
.++.+.+.|..+.+....+. -.+....++++|+|+++++.+.+. .+.+.|.......
T Consensus 169 ~~~~~~~~vtvID~~t~~v~~qI~----Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~ 244 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWEVAWQVL----VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 244 (595)
T ss_dssp CGGGEEEEEEEEETTTTEEEEEEE----ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred cccccCceEEEEECCCCeEEEEEE----eCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence 34679999999888877762 112456688999999999888653 3667765443321
Q ss_pred hhhccccccCCCCccccccCccccCcc-cccccccCcceeEEEEc--CCEEE-EecCCCeEEEecCCCCCccccccCCCc
Q psy10348 138 DACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIHRNYVDCVRWL--GDFVL-SKSCENCIICWKPGRLEDKELRTNETN 213 (291)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~--~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~ 213 (291)
..- ....+. +....++........ ..... -.....++.++ |++++ ++..+.+|.++|+.+.+...-..-...
T Consensus 245 v~~-Gk~~~i--~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 245 IAA-GDYQEL--NGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HHH-TCSEEE--TTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred ccC-CCeeEE--CcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 100 000000 011111111100000 00000 11234567777 66554 455689999999986531100000000
Q ss_pred eeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC------CCCcceeEEEec---cccccceeeeEEcc
Q psy10348 214 VTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ------DPSSIKFQILSH---PRCMSAVRQTTLSK 284 (291)
Q Consensus 214 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~---~~~~~~v~~~~~s~ 284 (291)
...+........ -..++++|+|....+.-.|+.|.+||+... +........+.. ++|...-.++.++|
T Consensus 321 ~~v~~~v~vG~g---P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 321 SAVVAEPELGLG---PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA 397 (595)
T ss_dssp GGEEECCBCCSC---EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC
T ss_pred cceEEEcCCCCC---cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC
Confidence 112333333333 234567788944455668999999999872 111222333322 14444446678899
Q ss_pred CCceeeC
Q psy10348 285 NGNVLLC 291 (291)
Q Consensus 285 ~g~~l~s 291 (291)
||++|++
T Consensus 398 DGk~l~~ 404 (595)
T 1fwx_A 398 TNDWLVC 404 (595)
T ss_dssp CSSEEEE
T ss_pred CCCEEEE
Confidence 9999974
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.13 E-value=7.2e-07 Score=67.44 Aligned_cols=224 Identities=6% Similarity=-0.034 Sum_probs=130.6
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
......++|++++. .++++-..++.|.+++.+.+.....+.........+++.+.++.++++-..++.|.++++...
T Consensus 35 ~~~~~gi~~d~~~~---~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 35 AKVIIGLAFDCVDK---VVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEEETTTT---EEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcEEEEEEecCCC---EEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 34567889998653 355566667899999987654433332222467899999844555556566789999998743
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
...... .........++++|++..|+.+.. .+.|..+++.... ...+.
T Consensus 112 ~~~~~~---~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~------------------------- 162 (267)
T 1npe_A 112 QRRVLF---DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILA------------------------- 162 (267)
T ss_dssp SCEEEE---CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEE-------------------------
T ss_pred CEEEEE---ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEE-------------------------
Confidence 322222 222245689999997776666554 3578777765322 11110
Q ss_pred cccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 167 TRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
.........++++ ++.| ++....+.|.++|...... ......... ... ++++ ++.++++
T Consensus 163 --~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~------------~~~~~~~~~-P~g--i~~d-~~~lyva 224 (267)
T 1npe_A 163 --QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR------------RKVLEGLQY-PFA--VTSY-GKNLYYT 224 (267)
T ss_dssp --CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE------------EEEEECCCS-EEE--EEEE-TTEEEEE
T ss_pred --ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce------------EEEecCCCC-ceE--EEEe-CCEEEEE
Confidence 0011235677886 4444 5555578999999865322 111111111 122 3444 2444444
Q ss_pred EcCCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCce
Q psy10348 244 GNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNV 288 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 288 (291)
....+.|..+|..+++. ...+.. +.......+++.|++.-
T Consensus 225 ~~~~~~v~~~d~~~g~~----~~~i~~-g~~~~p~gi~~~~~~~~ 264 (267)
T 1npe_A 225 DWKTNSVIAMDLAISKE----MDTFHP-HKQTRLYGITIALSQCP 264 (267)
T ss_dssp ETTTTEEEEEETTTTEE----EEEECC-SSCCCCCCEEEECSCC-
T ss_pred ECCCCeEEEEeCCCCCc----eEEEcc-ccccccceeeecCccCC
Confidence 44678999999988742 233321 21224788999998763
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.12 E-value=4.6e-08 Score=72.32 Aligned_cols=153 Identities=10% Similarity=-0.046 Sum_probs=105.5
Q ss_pred EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeE--EEEecCCCcEEEEeecCCeEEEEECCCcce
Q psy10348 14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINE--LKFHPQDFNLLLSVSKDHTLRLWNIKTDIC 91 (291)
Q Consensus 14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 91 (291)
..+.|+. + .++.+.+.+|.|+++|+++++.++.+ - ...... +++. +..+......++.+.+||.++.+.
T Consensus 58 qGL~~~~-~----~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 58 QGLVFHQ-G----HFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEEET-T----EEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEE
T ss_pred ceEEEEC-C----EEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcE
Confidence 5777773 2 48888888899999999999998887 3 333433 5554 335555566789999999999999
Q ss_pred eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccccc
Q psy10348 92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH 171 (291)
Q Consensus 92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (291)
+..+. . ...-..++ ++++.|+.+..++.|.++|..+.+.+..+.-.. . ...
T Consensus 129 ~~ti~---~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~--~---------------------g~~ 179 (268)
T 3nok_A 129 ERTTR---Y-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL--R---------------------GQP 179 (268)
T ss_dssp EEEEE---C-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE--T---------------------TEE
T ss_pred EEEEe---C-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC--C---------------------Ccc
Confidence 99884 2 12223444 567888877779999999999988766554210 0 001
Q ss_pred CcceeEEEEc-CCEEEEecCCCeEEEecCCCCCc
Q psy10348 172 RNYVDCVRWL-GDFVLSKSCENCIICWKPGRLED 204 (291)
Q Consensus 172 ~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~ 204 (291)
-..++.+.|. |.+.+..-.++.|.+.|..+++.
T Consensus 180 v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 180 VELINELECANGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp CCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE
T ss_pred cccccccEEeCCEEEEEECCCCeEEEEeCCCCcE
Confidence 1234667776 54444444688999999998865
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.09 E-value=2e-07 Score=68.36 Aligned_cols=189 Identities=10% Similarity=0.044 Sum_probs=118.2
Q ss_pred ceeEEEeeecc--ceeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-e
Q psy10348 47 ACVRHFYGHGH--AINELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-G 121 (291)
Q Consensus 47 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~ 121 (291)
+.++.+ .|.. ....+.|++ +.++.+.+.+| .|+.+|+.+++.+..+. - ............++.|+.. -
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~---l-~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE---V-PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE---C-CTTCCEEEEEEETTEEEEEES
T ss_pred EEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe---C-CCCcceeEEEEeCCEEEEEEe
Confidence 344555 4553 456899986 46677766654 89999999999888762 1 1222222222234555444 4
Q ss_pred cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCC
Q psy10348 122 MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGR 201 (291)
Q Consensus 122 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (291)
.++.+.+||..+.+.+.++.. ...=..++++++.|+.+..++.|.++|..+
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~-----------------------------~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t 133 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRY-----------------------------PGEGWALTSDDSHLYMSDGTAVIRKLDPDT 133 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEEC-----------------------------SSCCCEEEECSSCEEEECSSSEEEEECTTT
T ss_pred eCCEEEEEECCcCcEEEEEeC-----------------------------CCCceEEeeCCCEEEEECCCCeEEEEeCCC
Confidence 589999999999998776641 111246667766666566689999999988
Q ss_pred CCccccccCCCceeeeeeecCCc-----ccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-----
Q psy10348 202 LEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP----- 271 (291)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----- 271 (291)
.+. +.++.... ..++-+.+. +|+..+..-.+..|.+.|..+++.+ ..+...
T Consensus 134 ~~~------------~~~I~V~~~g~~~~~lNeLe~~---~G~lyanvw~s~~I~vIDp~tG~V~----~~idl~~l~~~ 194 (243)
T 3mbr_X 134 LQQ------------VGSIKVTAGGRPLDNLNELEWV---NGELLANVWLTSRIARIDPASGKVV----AWIDLQALVPD 194 (243)
T ss_dssp CCE------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTTTEEEEECTTTCBEE----EEEECGGGSTT
T ss_pred CeE------------EEEEEEccCCcccccceeeEEe---CCEEEEEECCCCeEEEEECCCCCEE----EEEECCcCccc
Confidence 754 33333221 122233332 3666666657789999999998643 333221
Q ss_pred ------ccccceeeeEEccCCceee
Q psy10348 272 ------RCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 272 ------~~~~~v~~~~~s~~g~~l~ 290 (291)
......+.+||+|+++.|.
T Consensus 195 ~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 195 ADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp TTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred cccccCCcCCceEEEEEcCCCCEEE
Confidence 1123568999999877664
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=1.1e-07 Score=75.70 Aligned_cols=184 Identities=9% Similarity=-0.037 Sum_probs=112.6
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeeccce-----eEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCC
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAI-----NELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHR 102 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 102 (291)
.+++++.++.|..+|.++|+.+.......... ...... +..++.+..++.+..+|..+|+.+..........
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 56666777777777777777766654322111 112222 2467778889999999999998877653100000
Q ss_pred -C---ceEEEEEcc--CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCccee
Q psy10348 103 -D---EVLSADFDL--LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVD 176 (291)
Q Consensus 103 -~---~i~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 176 (291)
. .+..+.-.| .+..++.++.++.+..+|..+++.+.... .....
T Consensus 222 ~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~------------------------------~~~~~ 271 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE------------------------------LGSVN 271 (376)
T ss_dssp --------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC------------------------------CCCEE
T ss_pred CcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc------------------------------CCCCC
Confidence 0 000010111 24678888889999999999887654321 11133
Q ss_pred EEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEEEcCCCcEEEEEc
Q psy10348 177 CVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDL 255 (291)
Q Consensus 177 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 255 (291)
.+...++.++.++.++.|..+|..+++. +..... ....... .... +..|++++.+|.|.++|.
T Consensus 272 ~~~~~~~~l~~~~~~g~l~~~d~~tG~~------------~w~~~~~~~~~~~~--~~~~--~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 272 DFIVDGNRIYLVDQNDRVMALTIDGGVT------------LWTQSDLLHRLLTS--PVLY--NGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp EEEEETTEEEEEETTCCEEEEETTTCCE------------EEEECTTTTSCCCC--CEEE--TTEEEEECTTSEEEEEET
T ss_pred CceEECCEEEEEcCCCeEEEEECCCCcE------------EEeecccCCCcccC--CEEE--CCEEEEEeCCCeEEEEEC
Confidence 4455578888888899999999988854 222221 1111111 1112 678889999999999999
Q ss_pred CCCCC
Q psy10348 256 DVQDP 260 (291)
Q Consensus 256 ~~~~~ 260 (291)
.+++.
T Consensus 336 ~tG~~ 340 (376)
T 3q7m_A 336 EDGRF 340 (376)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 99863
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=1.2e-08 Score=80.44 Aligned_cols=104 Identities=12% Similarity=-0.028 Sum_probs=73.0
Q ss_pred EEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEeec
Q psy10348 15 TCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVSK 77 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~ 77 (291)
.+.++|++. +++++. .++.|.+||+.+++.+..+... ......++++| ++++++++..
T Consensus 69 ~i~~spDg~----~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~ 143 (368)
T 1mda_H 69 LAVAGHSGS----DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLF 143 (368)
T ss_dssp EEEECTTSS----CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEEC
T ss_pred ceEECCCCC----EEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEcc
Confidence 799999984 666664 4789999999999999998743 12457899999 8888888864
Q ss_pred --CCeEEE--EECCCcceeeeeccccCCCCceEEEEEccCCC-EEEEEecCCcEEEEeccC
Q psy10348 78 --DHTLRL--WNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLWDLTK 133 (291)
Q Consensus 78 --dg~i~v--wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~~ 133 (291)
+..|.+ +|..+ +..+. .+. . ....|+++ .+++.+.|+.+.+.|+.+
T Consensus 144 ~~~~~v~V~~iD~~t---v~~i~--v~~--~---~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 144 GSSAAAGLSVPGASD---DQLTK--SAS--C---FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp SSSCEEEEEETTTEE---EEEEE--CSS--C---CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCCCeEEEEEEchhh---ceEEE--CCC--c---eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 457888 99876 34441 111 1 12334443 445566788888888876
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.07 E-value=1.1e-07 Score=70.33 Aligned_cols=156 Identities=10% Similarity=0.000 Sum_probs=103.1
Q ss_pred eEEEEeeeccCCCCCEEEEecCCC--eEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 13 FYTCAWSMDLESGRPLLAVAGSRA--VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
...+.|+ ++ .++.+.+.+| .|+++|+++++.++.+... .........+.+..+......++.+.+||.++.+
T Consensus 45 tqGL~~~-~~----~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYR-NG----YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEE-TT----EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEE-CC----EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 3678887 44 3666666665 8999999999999888643 3333333333133555555568999999999999
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
.+..+. .. ..=..+ +++++.|+.+..++.|.++|..+.+.+..+.-.. .+
T Consensus 119 ~~~ti~---~~-~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~------------------------~g 168 (262)
T 3nol_A 119 QVRSFN---YD-GEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA------------------------HG 168 (262)
T ss_dssp EEEEEE---CS-SCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEE------------------------TT
T ss_pred EEEEEE---CC-CCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc------------------------CC
Confidence 998883 21 111233 3567777777668889999999988766554100 00
Q ss_pred c-CcceeEEEEc-CCEEEEecCCCeEEEecCCCCCc
Q psy10348 171 H-RNYVDCVRWL-GDFVLSKSCENCIICWKPGRLED 204 (291)
Q Consensus 171 ~-~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~ 204 (291)
. -..++.+.|. |...+..-.++.|.+.|..+++.
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBE
T ss_pred ccccccceeEEECCEEEEEEccCCeEEEEECCCCcE
Confidence 1 1224456666 54444444688999999998865
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=2.2e-07 Score=68.70 Aligned_cols=188 Identities=11% Similarity=0.059 Sum_probs=121.1
Q ss_pred ceeEEEeeeccc--eeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEE-EecC
Q psy10348 47 ACVRHFYGHGHA--INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMD 123 (291)
Q Consensus 47 ~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d 123 (291)
+.++.+ .|... ...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ +.. ...-..++. .++.|+. .-.+
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-~~FgeGit~--~g~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME--RLG-NIFAEGLAS--DGERLYQLTWTE 115 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-TCCEEEEEE--CSSCEEEEESSS
T ss_pred EEEEEE-cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-CcceeEEEE--eCCEEEEEEccC
Confidence 344555 35433 4688887 4578888888999999999999887765 232 212233444 3444444 4458
Q ss_pred CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCC
Q psy10348 124 HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLE 203 (291)
Q Consensus 124 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (291)
+.+.+||..+.+.+.++.. ...-..++++++.|+.+..++.|.++|..+.+
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~-----------------------------~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRY-----------------------------SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp CEEEEEETTTTEEEEEEEC-----------------------------SSCCCCEEEETTEEEEECSSSEEEEECTTTCC
T ss_pred CEEEEEECCcCcEEEEEeC-----------------------------CCceeEEecCCCEEEEECCCCEEEEEcCCCCe
Confidence 9999999999998776641 11124666777777777779999999998875
Q ss_pred ccccccCCCceeeeeeecCCc--c---cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-------
Q psy10348 204 DKELRTNETNVTIINRLNFKD--C---EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP------- 271 (291)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~--~---~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~------- 271 (291)
. +.++.... . .++-+.+. +|+..+....++.|.+.|..+++.+ ..+...
T Consensus 167 v------------~~~I~V~~~g~~v~~lNeLe~~---dG~lyanvw~s~~I~vIDp~TG~V~----~~Idl~~L~~~~~ 227 (268)
T 3nok_A 167 L------------VGAVQVKLRGQPVELINELECA---NGVIYANIWHSSDVLEIDPATGTVV----GVIDASALTRAVA 227 (268)
T ss_dssp E------------EEEEECEETTEECCCEEEEEEE---TTEEEEEETTCSEEEEECTTTCBEE----EEEECHHHHHHHT
T ss_pred E------------EEEEEeCCCCcccccccccEEe---CCEEEEEECCCCeEEEEeCCCCcEE----EEEECCCCccccc
Confidence 4 33333221 1 22333433 4766666657889999999998643 333221
Q ss_pred ----ccccceeeeEEccCCceee
Q psy10348 272 ----RCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 272 ----~~~~~v~~~~~s~~g~~l~ 290 (291)
.-....+.|||+|+++.|.
T Consensus 228 ~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 228 GQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp TTCCCTTCCEEEEEECTTTCCEE
T ss_pred ccccCcCCceEEEEEcCCCCEEE
Confidence 1123568999999877654
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.03 E-value=3.3e-07 Score=67.18 Aligned_cols=159 Identities=9% Similarity=-0.014 Sum_probs=105.9
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCC--CeEEEEccCCcceeEEEeeecccee--EEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSR--AVIRIFSPAFHACVRHFYGHGHAIN--ELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
..-...+.|+.+ .++.+.+.+ ..|+.+|+++++.++.+.... ... .+++. ++++......++.+.+||
T Consensus 20 ~~ftqGL~~~~~-----~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~--~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 20 TAFTEGLFYLRG-----HLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAW--RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp TCCEEEEEEETT-----EEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred ccccccEEEECC-----EEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence 344558888863 366666665 489999999999998886433 233 34444 345566666789999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
.++.+.+..+. .. ..-..++ +++..|+.+..++.|.++|..+.+.+.++.-.. .+
T Consensus 92 ~~tl~~~~ti~---~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~--~g----------------- 146 (243)
T 3mbr_X 92 LATLTPRARFR---YP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA--GG----------------- 146 (243)
T ss_dssp TTTTEEEEEEE---CS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE--TT-----------------
T ss_pred CCcCcEEEEEe---CC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc--CC-----------------
Confidence 99999999883 22 2223444 567777777778999999999988766554210 00
Q ss_pred ccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCcc
Q psy10348 166 STRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDK 205 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~ 205 (291)
..-..++.+.|. |...+..-.+..|.+.|..+++..
T Consensus 147 ----~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 147 ----RPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp ----EECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred ----cccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEE
Confidence 011234566676 444444446889999999988653
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.01 E-value=3.8e-08 Score=84.88 Aligned_cols=186 Identities=12% Similarity=0.013 Sum_probs=109.4
Q ss_pred eccceeEEEEecCCCcEEEE-----eecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc----
Q psy10348 55 HGHAINELKFHPQDFNLLLS-----VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS---- 125 (291)
Q Consensus 55 ~~~~v~~~~~~~~~~~~l~s-----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~---- 125 (291)
|...+..++|+| |+++||- |+.+..|++||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~----~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 127 GTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETP----LKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp SCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE----EEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccc----cCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 445688899999 8888874 333457999999998865432 111123567899 9999998887743
Q ss_pred ---------EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc-cCcceeEEEEc--CCEEEEec----
Q psy10348 126 ---------LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYVDCVRWL--GDFVLSKS---- 189 (291)
Q Consensus 126 ---------i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l~~~~---- 189 (291)
|++|++.+........ ..... |......+.|+ |++|+...
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v------------------------~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLV------------------------FGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEE------------------------ESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccccCCCcEEEEEECCCCcccceEE------------------------EecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 8889887765322111 00011 23345677787 66554322
Q ss_pred CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE-EEcCC---CcEEEEEcCCCCCCccee
Q psy10348 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA-VGNQS---GRTYVWDLDVQDPSSIKF 265 (291)
Q Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-~~~~d---g~i~vwd~~~~~~~~~~~ 265 (291)
.++.|.++|+.+.... ...+..+....... +. +++..|+ ....+ +.|..+++.++... ..
T Consensus 257 ~~~~i~~~d~~~~~~~-----------~~~l~~~~~~~~~~-~~--~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~~- 320 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAP-----------LLTVQGDLDADVSL-VD--NKGSTLYLLTNRDAPNRRLVTVDAANPGPA-HW- 320 (693)
T ss_dssp SCCEEEEEETTSTTCC-----------CEEEECSSSSCEEE-EE--EETTEEEEEECTTCTTCEEEEEETTSCCGG-GC-
T ss_pred CCcEEEEEECCCCCCc-----------eEEEeCCCCceEEE-Ee--ccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cc-
Confidence 2358999998765321 23333333333222 33 3355544 44433 67999999886431 11
Q ss_pred EEEeccccccceeeeEEccCCceee
Q psy10348 266 QILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 266 ~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
..+. .+...+. .|++++++|+
T Consensus 321 ~~l~--~~~~~~~--~~s~~g~~lv 341 (693)
T 3iuj_A 321 RDLI--PERQQVL--TVHSGSGYLF 341 (693)
T ss_dssp EEEE--CCCSSCE--EEEEETTEEE
T ss_pred EEEe--cCCCCEE--EEEEECCEEE
Confidence 2222 2233443 8999998875
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.01 E-value=4.8e-08 Score=77.85 Aligned_cols=149 Identities=3% Similarity=-0.151 Sum_probs=95.3
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeec---------cceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeecc
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHG---------HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 97 (291)
..+++++.++.|..+|.++|+.+....... ..+.+.. .. ++..++.++.++.|..+|.++|+.+....
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~- 130 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TV-SGGHVYIGSEKAQVYALNTSDGTVAWQTK- 130 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EE-ETTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eE-eCCEEEEEcCCCEEEEEECCCCCEEEEEe-
Confidence 478888889999999999999887765421 2222221 22 33567778889999999999999887652
Q ss_pred ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeE
Q psy10348 98 VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC 177 (291)
Q Consensus 98 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 177 (291)
........... .+..++.++.++.|..+|..+++.+......... . ..... ..
T Consensus 131 --~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~------------------~-~~~~~----~~ 183 (376)
T 3q7m_A 131 --VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS------------------L-SLRGE----SA 183 (376)
T ss_dssp --CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC------------------------CCC----CC
T ss_pred --CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc------------------e-eecCC----CC
Confidence 22111111112 1457888888999999999999876544310000 0 00000 11
Q ss_pred EEEcCCEEEEecCCCeEEEecCCCCCcc
Q psy10348 178 VRWLGDFVLSKSCENCIICWKPGRLEDK 205 (291)
Q Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (291)
....++.++.++.++.+..+|..+++..
T Consensus 184 ~~~~~~~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 184 PTTAFGAAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp CEEETTEEEECCTTTEEEEEETTTCCEE
T ss_pred cEEECCEEEEEcCCCEEEEEECCCCcEE
Confidence 2223667888888999999999877653
No 240
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=1.1e-07 Score=73.48 Aligned_cols=195 Identities=7% Similarity=-0.033 Sum_probs=117.3
Q ss_pred ceeEEEeeeccceeEEEEecCCCc-EEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348 47 ACVRHFYGHGHAINELKFHPQDFN-LLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125 (291)
Q Consensus 47 ~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 125 (291)
..+..+...........|+| +++ ++++...++.|..|+. +++ ...+ ..+...+..++++++|+++++...++.
T Consensus 35 ~~~~~l~~~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~---~~~~~~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVL---LDATAFTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEE---EESCSCEEEEEECTTSCEEEEETTTTE
T ss_pred CceEEEecCCcCccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEE---eCCCCccceeeECCCCCEEEEECCCCE
Confidence 34455555556678899999 666 7778778899999998 454 3344 345667899999999997766666688
Q ss_pred EEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEE----ecC---------
Q psy10348 126 LKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLS----KSC--------- 190 (291)
Q Consensus 126 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~----~~~--------- 190 (291)
|.+|+.. ++.. .+.... . ......+..++++ |++.++ |..
T Consensus 109 v~~~~~~-g~~~-~~~~~~---~--------------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~ 163 (305)
T 3dr2_A 109 ITRSDAD-GQAH-LLVGRY---A--------------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPAD 163 (305)
T ss_dssp EEEECTT-SCEE-EEECEE---T--------------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCC
T ss_pred EEEECCC-CCEE-EEEecc---C--------------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccc
Confidence 9999875 4321 111000 0 0012235567776 556665 332
Q ss_pred ----CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC------CcEEEEEcCCCCC
Q psy10348 191 ----ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS------GRTYVWDLDVQDP 260 (291)
Q Consensus 191 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~ 260 (291)
.+.|..+|..+++.. .+. ...... .++++|+++.|+++... +.|.+|++....
T Consensus 164 ~~~~~~~v~~~d~~~g~~~----------~~~----~~~~p~--gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~- 226 (305)
T 3dr2_A 164 PELAHHSVYRLPPDGSPLQ----------RMA----DLDHPN--GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA- 226 (305)
T ss_dssp CSSSCEEEEEECSSSCCCE----------EEE----EESSEE--EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-
T ss_pred cccCCCeEEEEcCCCCcEE----------EEe----cCCCCc--ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-
Confidence 256777776554331 111 111222 35567889988877654 789999987653
Q ss_pred CcceeEEEeccccccceeeeEEccCCceeeC
Q psy10348 261 SSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291 (291)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s 291 (291)
+... ..+.. ...+.+..++++++|++.++
T Consensus 227 l~~~-~~~~~-~~~~~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 227 LHDR-RHFAS-VPDGLPDGFCVDRGGWLWSS 255 (305)
T ss_dssp EEEE-EEEEC-CSSSCCCSEEECTTSCEEEC
T ss_pred ccCC-eEEEE-CCCCCCCeEEECCCCCEEEe
Confidence 1111 11111 12345667888888886653
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.99 E-value=1.4e-10 Score=92.15 Aligned_cols=147 Identities=12% Similarity=-0.001 Sum_probs=81.4
Q ss_pred CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348 68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN 147 (291)
Q Consensus 68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 147 (291)
++..+++++.||.|+.||..+|+.+..+. . ..+.+..+..++..+++++.||.|+.||..+++.+..+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~---~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-- 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK---E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-- 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE---C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec---C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc--
Confidence 45788999999999999999999998873 3 4455555556777888888999999999988876543321000
Q ss_pred CCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI 227 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 227 (291)
.. ....++. ..++.+++++.|+.|..||..+++. +..+..+..
T Consensus 81 ----------------~~----~~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~------------~w~~~~~~~-- 123 (369)
T 2hz6_A 81 ----------------EL----VQASPCR---SSDGILYMGKKQDIWYVIDLLTGEK------------QQTLSSAFA-- 123 (369)
T ss_dssp ----------------HH----HTTCSCC--------CCCCEEEEEEEEECCC---------------------------
T ss_pred ----------------cc----cccCceE---ecCCEEEEEeCCCEEEEEECCCCcE------------EEEecCCCc--
Confidence 00 0001110 0255778888899999999998865 333332221
Q ss_pred EEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCc
Q psy10348 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSS 262 (291)
Q Consensus 228 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 262 (291)
..++ |++..+++++.|+.|+.||..+++...
T Consensus 124 --~~~~--p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 124 --DSLS--PSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp -------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred --cccc--ccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 1233 358899999999999999999987653
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=5e-08 Score=76.10 Aligned_cols=202 Identities=11% Similarity=-0.014 Sum_probs=125.9
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceE
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL 106 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~ 106 (291)
..+..++.++.|..+|.+ ++.......+...+.++...+ ++. +..++.++.|..+|.. ++....+ ......+.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~---~~~~~~~~ 180 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRF---KTNDAITS 180 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEE---ECSSCCCS
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEE---ecCCCcee
Confidence 378888888999999988 777766665555667777776 555 5557778999999998 7776665 33445566
Q ss_pred EEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEE
Q psy10348 107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFV 185 (291)
Q Consensus 107 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l 185 (291)
++...+++..++ ++ +.+..+| .+++...... .....+.++..+ ...+
T Consensus 181 ~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~----------------------------~~~~~~~~~~~~~~g~l 228 (330)
T 3hxj_A 181 AASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFY----------------------------AGYWTVTRPAISEDGTI 228 (330)
T ss_dssp CCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEEC----------------------------CSSCCCSCCEECTTSCE
T ss_pred eeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEc----------------------------cCCcceeceEECCCCeE
Confidence 677777776444 44 7899999 6655432221 022335566666 3367
Q ss_pred EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCccee
Q psy10348 186 LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKF 265 (291)
Q Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 265 (291)
..++.++.|..+|.. +.. +..+......... ...++ +..|.+++.+|.|..+|. +++. .
T Consensus 229 ~v~t~~~gl~~~~~~-g~~------------~~~~~~~~~~~~~--~~~~~-~g~l~v~t~~ggl~~~d~-~g~~----~ 287 (330)
T 3hxj_A 229 YVTSLDGHLYAINPD-GTE------------KWRFKTGKRIESS--PVIGN-TDTIYFGSYDGHLYAINP-DGTE----K 287 (330)
T ss_dssp EEEETTTEEEEECTT-SCE------------EEEEECSSCCCSC--CEECT-TSCEEEECTTCEEEEECT-TSCE----E
T ss_pred EEEcCCCeEEEECCC-CCE------------eEEeeCCCCcccc--ceEcC-CCeEEEecCCCCEEEECC-CCcE----E
Confidence 777778888888743 322 2222222211111 22233 446777888888999985 4432 1
Q ss_pred EEEeccccccceeeeEEccCCceee
Q psy10348 266 QILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 266 ~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
..... ....+.++...++|++.+
T Consensus 288 ~~~~~--~~~~~~~~~~d~~g~l~~ 310 (330)
T 3hxj_A 288 WNFET--GSWIIATPVIDENGTIYF 310 (330)
T ss_dssp EEEEC--SSCCCSCCEECTTCCEEE
T ss_pred EEEEc--CCccccceEEcCCCEEEE
Confidence 22221 234677788878887654
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=5.1e-08 Score=80.36 Aligned_cols=221 Identities=9% Similarity=-0.004 Sum_probs=132.7
Q ss_pred cceeEEEEe-e-eccCCCCCEEEEec------------------CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC
Q psy10348 10 EENFYTCAW-S-MDLESGRPLLAVAG------------------SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69 (291)
Q Consensus 10 ~~~i~~~~~-s-~~~~~~~~~l~~~~------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 69 (291)
......+++ + |++ .++++++ .++.+.+.|.++.+...++.--. ....++++| ++
T Consensus 133 g~~phg~~~~~~p~~----~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dG 206 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRS----NYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EG 206 (595)
T ss_dssp CCSEEEEEECCSSBC----SEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECS-SS
T ss_pred CCCCcceeeeecCCC----cEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECC-CC
Confidence 455677777 4 777 4777773 35789999999999888887433 457788999 88
Q ss_pred cEEEEeecCC--------------------------------------eEEEEECCC--cce-eeeeccccCCCCceEEE
Q psy10348 70 NLLLSVSKDH--------------------------------------TLRLWNIKT--DIC-IAIFGGVEGHRDEVLSA 108 (291)
Q Consensus 70 ~~l~s~~~dg--------------------------------------~i~vwd~~~--~~~-~~~~~~~~~~~~~i~~~ 108 (291)
+++++.+.+. .|.+.|..+ ++. +..+ .-.....++
T Consensus 207 k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~I----pvg~~PhGv 282 (595)
T 1fwx_A 207 KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYI----PIANNPHGC 282 (595)
T ss_dssp SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEE----EEESSCCCE
T ss_pred CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEE----ecCCCceEE
Confidence 8888877553 355666655 333 2333 122345679
Q ss_pred EEccCCCEEEEEec-CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEE
Q psy10348 109 DFDLLGTKIMSCGM-DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFV 185 (291)
Q Consensus 109 ~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l 185 (291)
.++|||+++++++. +.+|.++|+.+.+... ...+ .+. ....... .-......++|+ |...
T Consensus 283 ~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~--~~~l--~~~------------~~v~~~v-~vG~gP~h~aF~~dG~aY 345 (595)
T 1fwx_A 283 NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF--YENA--DPR------------SAVVAEP-ELGLGPLHTAFDGRGNAY 345 (595)
T ss_dssp EECTTSSEEEEECTTSSBEEEEEGGGHHHHH--HSCC--CGG------------GGEEECC-BCCSCEEEEEECTTSEEE
T ss_pred EEcCCCCEEEEeCCCCCeEEEEECccccccc--cccc--Ccc------------cceEEEc-CCCCCcceEEECCCCeEE
Confidence 99999998877764 8899999999764321 0000 000 0000000 022346778888 6344
Q ss_pred EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccE---EEEEEEecCCCcEEEEEcC---CCc----------
Q psy10348 186 LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEI---WFIRFSMDYWQKILAVGNQ---SGR---------- 249 (291)
Q Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~~~l~~~~~---dg~---------- 249 (291)
.+...|+.|.+||+..... ....+.....+.++..+..+- .......+|||++|++... |..
T Consensus 346 ~t~~ldsqV~kwdi~~a~~--~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~ 423 (595)
T 1fwx_A 346 TSLFLDSQVVKWNIEDAIR--AYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPEN 423 (595)
T ss_dssp EEETTTTEEEEEEHHHHHH--HHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEE
T ss_pred EEEecCCcEEEEEhhHhhh--hhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCc
Confidence 5666799999999866210 000001113455555554321 1112245788999999862 432
Q ss_pred EEEEEcCCCC
Q psy10348 250 TYVWDLDVQD 259 (291)
Q Consensus 250 i~vwd~~~~~ 259 (291)
-.++|+..++
T Consensus 424 ~ql~dis~~~ 433 (595)
T 1fwx_A 424 DQLIDISGDK 433 (595)
T ss_dssp EEEEECSSSS
T ss_pred ceEEEcCCCc
Confidence 1899996543
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=2.2e-07 Score=74.06 Aligned_cols=185 Identities=12% Similarity=0.080 Sum_probs=112.9
Q ss_pred cCCCcEEEEeecCCeEEEEECCCc----ceeeeec--ccc-C-CCCceEEEEEccCCCEEEEEecC------CcEEEEec
Q psy10348 66 PQDFNLLLSVSKDHTLRLWNIKTD----ICIAIFG--GVE-G-HRDEVLSADFDLLGTKIMSCGMD------HSLKLWDL 131 (291)
Q Consensus 66 ~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~--~~~-~-~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~ 131 (291)
++...+++++..+++|.++|+.+. +..+.+. .+. . -......+...|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 633345556677889999999755 4444441 000 1 11245678889999 77766555 78999999
Q ss_pred cCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEec-------------------C
Q psy10348 132 TKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKS-------------------C 190 (291)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-------------------~ 190 (291)
.+.+.+.++..... ....-..+.|+ ++.+++.. .
T Consensus 172 ~T~~v~~~~~~~~~-------------------------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~ 226 (462)
T 2ece_A 172 YSFEPLGKWEIDRG-------------------------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY 226 (462)
T ss_dssp TTCCEEEECCSBCT-------------------------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred CCCeEEEEEccCCC-------------------------CccccceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence 99987766542100 00111234454 55666664 4
Q ss_pred CCeEEEecCCCCCccccccCCCceeeeeeecCCc--ccEEEEEEEecCCCcEEEEEc------CCCcEEEEEcCCCCCCc
Q psy10348 191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKD--CEIWFIRFSMDYWQKILAVGN------QSGRTYVWDLDVQDPSS 262 (291)
Q Consensus 191 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~ 262 (291)
+.+|.+||+.+.+ .+.++.... ....-+.+.++|+++++++++ .+++|.+|....++.
T Consensus 227 ~d~V~v~D~~~~k------------~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~-- 292 (462)
T 2ece_A 227 GNRIHFWDLRKRK------------RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW-- 292 (462)
T ss_dssp CCEEEEEETTTTE------------EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE--
T ss_pred CCEEEEEECCCCc------------EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce--
Confidence 7899999998763 255555431 223345566799999998887 466888877765321
Q ss_pred ceeEEEeccc----------------cccceeeeEEccCCceee
Q psy10348 263 IKFQILSHPR----------------CMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 263 ~~~~~~~~~~----------------~~~~v~~~~~s~~g~~l~ 290 (291)
.....+.... ....+..+.+||||++|.
T Consensus 293 ~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 293 NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 1111111110 024578899999999985
No 245
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.97 E-value=1e-07 Score=81.92 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=54.5
Q ss_pred EEEeeeccCCCCCEEEEecCCCe-------------------EEEEccCCcceeEEEee--ec-------cceeEEEEec
Q psy10348 15 TCAWSMDLESGRPLLAVAGSRAV-------------------IRIFSPAFHACVRHFYG--HG-------HAINELKFHP 66 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~~dg~-------------------i~vw~~~~~~~~~~~~~--~~-------~~v~~~~~~~ 66 (291)
.+++.|+. .+++.+..++. |..+|.++|+.+..++. |. .+........
T Consensus 239 ~~~~d~~~----~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~ 314 (689)
T 1yiq_A 239 SFAYDPEL----NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI 314 (689)
T ss_dssp CEEEETTT----TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ceeEcCCC----CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc
Confidence 56777766 48888887764 99999999999988764 21 1222222223
Q ss_pred CCCc---EEEEeecCCeEEEEECCCcceeee
Q psy10348 67 QDFN---LLLSVSKDHTLRLWNIKTDICIAI 94 (291)
Q Consensus 67 ~~~~---~l~s~~~dg~i~vwd~~~~~~~~~ 94 (291)
++. .++.++.+|.++++|.++|+.+..
T Consensus 315 -~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 315 -DGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp -TTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred -CCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 444 788999999999999999998743
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=6.9e-08 Score=82.75 Aligned_cols=156 Identities=12% Similarity=0.137 Sum_probs=103.8
Q ss_pred EEEeeeccCCCCCEEEEecCCC-------------------eEEEEccCCcceeEEEee--ec-------cceeEEEEec
Q psy10348 15 TCAWSMDLESGRPLLAVAGSRA-------------------VIRIFSPAFHACVRHFYG--HG-------HAINELKFHP 66 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~~dg-------------------~i~vw~~~~~~~~~~~~~--~~-------~~v~~~~~~~ 66 (291)
.+++.|+. .+++.+..++ .|..+|.++|+.+..++. |. .....+....
T Consensus 247 ~~~~d~~~----~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~ 322 (677)
T 1kb0_A 247 SMTFDAEL----NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI 322 (677)
T ss_dssp CEEEETTT----TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE
T ss_pred ceeEcCCC----CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc
Confidence 56777776 4788777654 599999999999888763 21 1222233444
Q ss_pred CCC---cEEEEeecCCeEEEEECCCcceeeeecccc--------CCCCce------------------------EEEEEc
Q psy10348 67 QDF---NLLLSVSKDHTLRLWNIKTDICIAIFGGVE--------GHRDEV------------------------LSADFD 111 (291)
Q Consensus 67 ~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------~~~~~i------------------------~~~~~~ 111 (291)
++ ..++.++.+|.+.++|..+|+.+..+..-. ....++ ..++++
T Consensus 323 -dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d 401 (677)
T 1kb0_A 323 -AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN 401 (677)
T ss_dssp -TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE
T ss_pred -CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc
Confidence 56 689999999999999999999877653100 001111 146788
Q ss_pred cCCCEEEEEecC-------------------------------------------CcEEEEeccCchhhhhhccccccCC
Q psy10348 112 LLGTKIMSCGMD-------------------------------------------HSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 112 ~~~~~l~~~~~d-------------------------------------------~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
|++.++++...+ |.|..||+.+++.+....
T Consensus 402 p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~------- 474 (677)
T 1kb0_A 402 PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE------- 474 (677)
T ss_dssp TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-------
T ss_pred CCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-------
Confidence 988888876543 567777777766554432
Q ss_pred CCccccccCccccCcccccccccCcceeE--EEEcCCEEEEecCCCeEEEecCCCCCc
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDC--VRWLGDFVLSKSCENCIICWKPGRLED 204 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (291)
+..++.. +.-.+++++.++.|+.+++||.++++.
T Consensus 475 ----------------------~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 475 ----------------------HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp ----------------------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ----------------------CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 1111222 222377888899999999999999865
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.84 E-value=4.6e-06 Score=62.01 Aligned_cols=210 Identities=9% Similarity=0.038 Sum_probs=126.8
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-eccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
+.+..++|+|+.. .++++...++.|...|.. ++.++.+.- -......+++.+ ++.++++.-.++.+.++++...
T Consensus 27 ~~lSGla~~~~~~---~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 27 NNISSLTWSAQSN---TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp SCEEEEEEETTTT---EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTT
T ss_pred cCcceeEEeCCCC---EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCC
Confidence 5699999999864 466667788999999988 888877742 124577889988 7777676656788999987654
Q ss_pred cee---eeec-c--ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 90 ICI---AIFG-G--VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 90 ~~~---~~~~-~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
..+ .... . ....+.....++|+|.++.|+++.......+|.+. +. ..... + .. .. .+
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~-~~~~~--l--------~i---~~--~~ 164 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GL-LSSNE--L--------HI---SK--DK 164 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-ST-TCSSC--C--------EE---EE--CH
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-cc-ccCCc--e--------ee---ec--ch
Confidence 422 2221 0 02345567999999999888888876666777765 11 00000 0 00 00 00
Q ss_pred ccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCc-----ccEEEEEEEec
Q psy10348 164 QFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-----CEIWFIRFSMD 235 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~ 235 (291)
.+. ...+...+.+++++ +.+++.......|..+|.... .. ....+.... .....=-++++
T Consensus 165 ~~~-~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~----------~~~~L~~g~~~l~~~~~qpEGia~d 232 (255)
T 3qqz_A 165 ALQ-RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VI----------GEMSLTKGSRGLSHNIKQAEGVAMD 232 (255)
T ss_dssp HHH-HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EE----------EEEECSTTGGGCSSCCCSEEEEEEC
T ss_pred hhc-cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EE----------EEEEcCCccCCcccccCCCCeeEEC
Confidence 000 00122346788888 567788888899999997654 21 122222110 00112235667
Q ss_pred CCCcEEEEEcCCCcEEEEEc
Q psy10348 236 YWQKILAVGNQSGRTYVWDL 255 (291)
Q Consensus 236 ~~~~~l~~~~~dg~i~vwd~ 255 (291)
++|+ |++.++-+.++.+.-
T Consensus 233 ~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 233 ASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp TTCC-EEEEETTTEEEEEEC
T ss_pred CCCC-EEEEcCCceEEEEEe
Confidence 7787 444466666666653
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.83 E-value=1.6e-05 Score=61.37 Aligned_cols=234 Identities=8% Similarity=-0.025 Sum_probs=129.5
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC-C-eEEEEECCC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD-H-TLRLWNIKT 88 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g-~i~vwd~~~ 88 (291)
.....++|++++ .++++-..++.|..||.+. +....+. .......+++.+ +++++++.... + .|..+|..+
T Consensus 32 ~~pegia~~~~g----~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDG----TIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTS----CEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCC----CEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC
Confidence 456788999887 4777777889999999874 4333333 345688999999 77766654432 2 476777777
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchh-hhhhccccccCCCCccccccCccccCccccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI-KDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
++...... . ........++..+.+..+++-..++.|..+|...++. +....... .+. ..
T Consensus 105 g~~~~~~~-~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~--~~~---~~------------- 164 (306)
T 2p4o_A 105 GTVETLLT-L-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML--ARS---NS------------- 164 (306)
T ss_dssp SCEEEEEE-C-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG--SCS---ST-------------
T ss_pred CeEEEEEe-C-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc--ccc---cc-------------
Confidence 76543321 1 1222334555555554444444588888888765321 10000000 000 00
Q ss_pred ccccCcceeEEEEcCC-EEEEecCCCeEEEecCCC-CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348 168 RDIHRNYVDCVRWLGD-FVLSKSCENCIICWKPGR-LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245 (291)
Q Consensus 168 ~~~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 245 (291)
.........+..+++ ++++-...+.|..+++.. +... .......+.... .++.+++|+++++..
T Consensus 165 -~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~-------~~~~~~~~~~P~------gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 165 -ESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPG-------EPEIFVEQTNID------DFAFDVEGNLYGATH 230 (306)
T ss_dssp -TCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBC-------CCEEEEESCCCS------SEEEBTTCCEEEECB
T ss_pred -cCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCC-------ccEEEeccCCCC------CeEECCCCCEEEEeC
Confidence 001112233444565 445556678999999864 2110 001122221122 256678898877777
Q ss_pred CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEc---cCCceee
Q psy10348 246 QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLS---KNGNVLL 290 (291)
Q Consensus 246 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~g~~l~ 290 (291)
..+.|.+++.. ++ .............+++++|. ||++.|.
T Consensus 231 ~~~~V~~~~~~-G~----~~~~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 231 IYNSVVRIAPD-RS----TTIIAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp TTCCEEEECTT-CC----EEEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred CCCeEEEECCC-CC----EEEEeecccccCCceEEEEecccCCCCEEE
Confidence 78899999875 32 11121222222468899999 8877664
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.77 E-value=2.1e-07 Score=72.54 Aligned_cols=177 Identities=12% Similarity=0.011 Sum_probs=110.8
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~ 107 (291)
.+..++.++.|..+|.+ ++.+..+......+.++...+ ++.+++. + +.|..+| .+++....+ ......+.+
T Consensus 149 ~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v~-t--~~l~~~d-~~g~~~~~~---~~~~~~~~~ 219 (330)
T 3hxj_A 149 TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK-DGTIYFG-S--DKVYAIN-PDGTEKWNF---YAGYWTVTR 219 (330)
T ss_dssp CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TCCEEEE-S--SSEEEEC-TTSCEEEEE---CCSSCCCSC
T ss_pred EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC-CCEEEEE-e--CEEEEEC-CCCcEEEEE---ccCCcceec
Confidence 57777888999999998 887777765566677787776 6665554 4 7799999 777776665 344466778
Q ss_pred EEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEE
Q psy10348 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVL 186 (291)
Q Consensus 108 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~ 186 (291)
+...++|. +..++.++.+..+|. +++....+.. ....+..+... +..|.
T Consensus 220 ~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~----------------------------~~~~~~~~~~~~~g~l~ 269 (330)
T 3hxj_A 220 PAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT----------------------------GKRIESSPVIGNTDTIY 269 (330)
T ss_dssp CEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC----------------------------SSCCCSCCEECTTSCEE
T ss_pred eEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC----------------------------CCCccccceEcCCCeEE
Confidence 88887775 555666788888874 3433322210 11112233444 56778
Q ss_pred EecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 187 SKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
.++.++.|..+|. +++. +..+......+. .+..++++ .|..|+.+|.+++......+
T Consensus 270 v~t~~ggl~~~d~-~g~~------------~~~~~~~~~~~~--~~~~d~~g-~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 270 FGSYDGHLYAINP-DGTE------------KWNFETGSWIIA--TPVIDENG-TIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EECTTCEEEEECT-TSCE------------EEEEECSSCCCS--CCEECTTC-CEEEECTTSCEEEEEC----
T ss_pred EecCCCCEEEECC-CCcE------------EEEEEcCCcccc--ceEEcCCC-EEEEEcCCCeEEEEeccccc
Confidence 8888989999985 4432 233322222222 23344445 46778899999998876543
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.74 E-value=4.5e-05 Score=60.89 Aligned_cols=202 Identities=7% Similarity=-0.099 Sum_probs=120.8
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
......++|.+... .++++-...+.|..++++.+.....+.........+++.+.++.++++-...+.|.+.++...
T Consensus 115 ~~~~~gl~~d~~~~---~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRE---LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CCccEEEEEecCCC---eEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 34567788887553 355555667889999987655433333223455788998756666666666788999988744
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEec-C-CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-D-HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
.....+ .........++++|.+..|+.+.. . +.|..+++...... .+.
T Consensus 192 ~~~~l~---~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~-------------------------- 241 (386)
T 3v65_B 192 HRKVLL---WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIA-------------------------- 241 (386)
T ss_dssp SCEEEE---CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE--------------------------
T ss_pred ceEEee---cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EEE--------------------------
Confidence 333333 233456789999998776666554 3 56777776543211 110
Q ss_pred ccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 168 RDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 168 ~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
.........++++ +.+.++-...+.|..+|+...... .+ +.........+++ + .+.++++-
T Consensus 242 -~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~----------~~--~~~~~~~P~giav--~-~~~ly~td 305 (386)
T 3v65_B 242 -DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK----------AV--ISQGLPHPFAITV--F-EDSLYWTD 305 (386)
T ss_dssp -CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE----------EE--ECSSCSSEEEEEE--E-TTEEEEEE
T ss_pred -ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE----------EE--EECCCCCceEEEE--E-CCEEEEee
Confidence 0012235678886 345555556788999998653221 11 1111222334444 2 25666666
Q ss_pred cCCCcEEEEEcCCCCC
Q psy10348 245 NQSGRTYVWDLDVQDP 260 (291)
Q Consensus 245 ~~dg~i~vwd~~~~~~ 260 (291)
...+.|..++..+++.
T Consensus 306 ~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 306 WHTKSINSANKFTGKN 321 (386)
T ss_dssp TTTTEEEEEETTTCCS
T ss_pred CCCCeEEEEECCCCcc
Confidence 6788899999766654
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=2.5e-05 Score=60.73 Aligned_cols=197 Identities=9% Similarity=-0.017 Sum_probs=112.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--------------------eccceeEEEEecCCCc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--------------------HGHAINELKFHPQDFN 70 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~ 70 (291)
....+++|.+++ .++.++..++.|..|+..+++. ..+.. ....+..+++.+.++.
T Consensus 19 ~~p~~i~~d~~g----~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 19 YAPNSFTFDSTN----KGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp SCCCCEECCTTC----SSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred CCceEEEEcCCC----CEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 345678888877 4788888899999999876543 23321 0124678999863444
Q ss_pred EEEEeecCCeEEEEECCCcceeeeecc-ccC-CCCceEEEEEcc-CCCEEEEEec-----------------CCcEEEEe
Q psy10348 71 LLLSVSKDHTLRLWNIKTDICIAIFGG-VEG-HRDEVLSADFDL-LGTKIMSCGM-----------------DHSLKLWD 130 (291)
Q Consensus 71 ~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~-~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i~v~d 130 (291)
|+.+...+.|..+|..++.. ..+.. ..+ .......+++.+ +|+..++-.. ++.|..||
T Consensus 94 -l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp -EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred -EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 55555555688888775532 22210 011 123467899999 8876665432 25577777
Q ss_pred ccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCCCcccc
Q psy10348 131 LTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRLEDKEL 207 (291)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~ 207 (291)
..+++...... .......++++ ++.|+.+ ...+.|..|++......
T Consensus 172 ~~~~~~~~~~~-----------------------------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-- 220 (322)
T 2fp8_A 172 PSTKETTLLLK-----------------------------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-- 220 (322)
T ss_dssp TTTTEEEEEEE-----------------------------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT--
T ss_pred CCCCEEEEecc-----------------------------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC--
Confidence 65543211000 11123467787 5555544 55789999998753210
Q ss_pred ccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcC----------CCcEEEEEcC
Q psy10348 208 RTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQ----------SGRTYVWDLD 256 (291)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~----------dg~i~vwd~~ 256 (291)
....+.... . .. .++.+++|++.++... .+.|..+|..
T Consensus 221 -----~~~~~~~~~---g-P~--gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 221 -----TAEVLVKIP---N-PG--NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp -----CEEEEEECS---S-EE--EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred -----ccceEEeCC---C-CC--CeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 001122221 1 22 3566777886666544 4667788764
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.70 E-value=8.3e-06 Score=69.91 Aligned_cols=114 Identities=11% Similarity=0.056 Sum_probs=72.7
Q ss_pred EEEeee-ccCCCCCEEEEecCCC-----------eEEEEccCCccee--EEEe-eeccceeEEEEecCCCcEEEEeec-C
Q psy10348 15 TCAWSM-DLESGRPLLAVAGSRA-----------VIRIFSPAFHACV--RHFY-GHGHAINELKFHPQDFNLLLSVSK-D 78 (291)
Q Consensus 15 ~~~~s~-~~~~~~~~l~~~~~dg-----------~i~vw~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~s~~~-d 78 (291)
++++.+ ++ ++++.|+.++ .+.+||+.+++.. ..+. .+.....++++.. ++.+++.|+. +
T Consensus 190 ~~av~~~~g----~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSG----RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTT----EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSST
T ss_pred eEEEEecCC----EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCC
Confidence 455565 44 5888876542 6889999877532 2332 1233344577777 8889999884 4
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cC-----CcEEEEeccCch
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MD-----HSLKLWDLTKPE 135 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-----~~i~v~d~~~~~ 135 (291)
..+.+||..+++....- .+..... -.+++..++++.++.|+ .+ ..+.+||..+.+
T Consensus 265 ~~v~~yd~~t~~W~~~~-~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGP-DMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp TCEEEEEGGGTEEEECC-CCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CceEEecCcCCceeECC-CCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 57999999877544321 1122111 23455667899989888 34 568999997754
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.70 E-value=4.2e-06 Score=72.84 Aligned_cols=113 Identities=13% Similarity=0.067 Sum_probs=74.2
Q ss_pred eeEEEEee-eccCCCCCEEEEecC-C----CeEEEEccCCc-ceeE-EEeeeccceeEEEEecCCCcEEEEeecC-----
Q psy10348 12 NFYTCAWS-MDLESGRPLLAVAGS-R----AVIRIFSPAFH-ACVR-HFYGHGHAINELKFHPQDFNLLLSVSKD----- 78 (291)
Q Consensus 12 ~i~~~~~s-~~~~~~~~~l~~~~~-d----g~i~vw~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d----- 78 (291)
.+...+|| ||+. +||.+.. + ..|+++|+.++ +.+. .+. .....+.|+| +++.|+....|
T Consensus 175 ~~~~~~~S~PDG~----~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPPEHD----LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGP-DHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTTTTC----EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECS-STTEEEEEEECTTCCE
T ss_pred EEeeeEecCCCCC----EEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEec-CCCEEEEEEECCCCCC
Confidence 56788999 9984 7765432 2 35999999988 6432 122 2245789999 77666665554
Q ss_pred CeEEEEECCCcce--eeeeccccCCCCceEEEEEccCCCEEEEEec---CCcEEEEeccCc
Q psy10348 79 HTLRLWNIKTDIC--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGM---DHSLKLWDLTKP 134 (291)
Q Consensus 79 g~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~ 134 (291)
..|.++++.++.. ...+. .........+.|+|+|++|+..+. ...|.++|+.++
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYE--EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEE--CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CEEEEEECCCCchhcEEEEe--cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 3588888877642 22331 123345678899999998876653 345778888765
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.64 E-value=5.9e-05 Score=56.83 Aligned_cols=186 Identities=10% Similarity=-0.046 Sum_probs=107.2
Q ss_pred CEEEEecCCCeEEEEccCCcce-----eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCC
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHAC-----VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH 101 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 101 (291)
++|+.+.. +.|+.++++.... ...+......+..++|++.++.++++-..++.|..+++..+.....+ ...
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---~~~ 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII---RQD 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE---CTT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE---ECC
Confidence 35555543 5788898875432 11233334567899999844556666666789999998765443333 222
Q ss_pred CCceEEEEEccCCCEEEEEe-cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEE
Q psy10348 102 RDEVLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW 180 (291)
Q Consensus 102 ~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 180 (291)
......+++++++..|+.+. ..+.|.++++..... ..+. .........+++
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~---------------------------~~~~~~P~~i~v 129 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLF---------------------------DTGLVNPRGIVT 129 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE---------------------------CSSCSSEEEEEE
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEE---------------------------ECCCCCccEEEE
Confidence 35678999999766665554 467899998764321 1110 001123467777
Q ss_pred c--CCEEEEecC---CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEE
Q psy10348 181 L--GDFVLSKSC---ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWD 254 (291)
Q Consensus 181 ~--~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd 254 (291)
+ +..|+.+.. .+.|..+++..... ..+.. ....... .+++++++..|+.+ ...+.|.++|
T Consensus 130 d~~~g~lyv~~~~~~~~~I~~~~~dg~~~----------~~~~~--~~~~~P~--gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 130 DPVRGNLYWTDWNRDNPKIETSHMDGTNR----------RILAQ--DNLGLPN--GLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp ETTTTEEEEEECCSSSCEEEEEETTSCCC----------EEEEC--TTCSCEE--EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeCCCEEEEEECCCCCcEEEEEecCCCCc----------EEEEE--CCCCCCc--EEEEcCCCCEEEEEECCCCEEEEEe
Confidence 6 445544443 36888887754321 11111 1111222 34556766666544 4668999999
Q ss_pred cCCC
Q psy10348 255 LDVQ 258 (291)
Q Consensus 255 ~~~~ 258 (291)
+...
T Consensus 196 ~~g~ 199 (267)
T 1npe_A 196 PAQP 199 (267)
T ss_dssp TTEE
T ss_pred cCCC
Confidence 8754
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=2.1e-05 Score=67.49 Aligned_cols=110 Identities=12% Similarity=0.193 Sum_probs=76.7
Q ss_pred EEEEecC------CCeEEEEccCCcceeEEEeeec-------------------------------cceeEEEEecCCCc
Q psy10348 28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHG-------------------------------HAINELKFHPQDFN 70 (291)
Q Consensus 28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~ 70 (291)
.++++.. +|.|+.+|.++|+.+..+.... .....+++.| +..
T Consensus 164 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~ 242 (668)
T 1kv9_A 164 KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELD 242 (668)
T ss_dssp EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTT
T ss_pred EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCC
Confidence 5555543 5899999999999988775210 0112467888 667
Q ss_pred EEEEeecCC-------------------eEEEEECCCcceeeeeccccCCC-------CceEEEEEccCCC---EEEEEe
Q psy10348 71 LLLSVSKDH-------------------TLRLWNIKTDICIAIFGGVEGHR-------DEVLSADFDLLGT---KIMSCG 121 (291)
Q Consensus 71 ~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~l~~~~ 121 (291)
+++.+..++ .|..+|.++|+.+..+.. ..|. .+.....+..+|+ .++.++
T Consensus 243 ~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~-~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~ 321 (668)
T 1kv9_A 243 LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV-TPGDSWDFTATQQITLAELNIDGKPRKVLMQAP 321 (668)
T ss_dssp EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECC
T ss_pred EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec-CCCccccccCCCCcEEEEeccCCcEEEEEEEEC
Confidence 787777665 399999999999887742 1122 2333333334665 688999
Q ss_pred cCCcEEEEeccCchhhhh
Q psy10348 122 MDHSLKLWDLTKPEIKDA 139 (291)
Q Consensus 122 ~d~~i~v~d~~~~~~~~~ 139 (291)
.+|.++++|..+++.+..
T Consensus 322 ~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 322 KNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp TTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCCEecc
Confidence 999999999999987743
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.59 E-value=0.00011 Score=57.67 Aligned_cols=201 Identities=8% Similarity=-0.083 Sum_probs=119.5
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
.....++|.+... .++++-...+.|..++++.+.....+.........+++.+.++.++++-...+.|.+.++....
T Consensus 73 ~~~~~l~~d~~~~---~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRE---LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEecccc---EEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 4467888887653 3555555678899999876554333332234567899987566666776677899999987443
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEec-C-CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-D-HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
....+ .........++++|.+..|+.+.. . +.|..+++...... .+.
T Consensus 150 ~~~l~---~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~--------------------------- 198 (349)
T 3v64_C 150 RKVLL---WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIA--------------------------- 198 (349)
T ss_dssp CEEEE---CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ESC---------------------------
T ss_pred eEEEE---eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EEE---------------------------
Confidence 33333 233456789999997766665543 3 67777776543211 110
Q ss_pred cccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348 169 DIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245 (291)
Q Consensus 169 ~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 245 (291)
...-.....++++ ++ +.++-...+.|..+|+...... .+ +.........+++ + ++.++++-.
T Consensus 199 ~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~----------~~--~~~~~~~P~giav--~-~~~ly~td~ 263 (349)
T 3v64_C 199 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK----------AV--ISQGLPHPFAITV--F-EDSLYWTDW 263 (349)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------EE--ECSSCSSEEEEEE--E-TTEEEEEET
T ss_pred ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE----------EE--EeCCCCCceEEEE--E-CCEEEEecC
Confidence 0012235678886 44 4445555788999998653221 11 1111222334444 2 255666666
Q ss_pred CCCcEEEEEcCCCCC
Q psy10348 246 QSGRTYVWDLDVQDP 260 (291)
Q Consensus 246 ~dg~i~vwd~~~~~~ 260 (291)
..+.|..++..+++.
T Consensus 264 ~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 264 HTKSINSANKFTGKN 278 (349)
T ss_dssp TTTEEEEEETTTCCS
T ss_pred CCCeEEEEEccCCCc
Confidence 788899998766654
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.56 E-value=3.2e-05 Score=65.03 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=72.2
Q ss_pred EEEEecC------CCeEEEEccCCcceeEEEeeeccc--------------------------------------eeEEE
Q psy10348 28 LLAVAGS------RAVIRIFSPAFHACVRHFYGHGHA--------------------------------------INELK 63 (291)
Q Consensus 28 ~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~--------------------------------------v~~~~ 63 (291)
.+++++. +|.|+.+|.++|+.+..+...... ...++
T Consensus 162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a 241 (571)
T 2ad6_A 162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA 241 (571)
T ss_dssp EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence 5555554 789999999999998877632111 01356
Q ss_pred EecCCCcEEEEeecC----------------CeEEEEECCCcceeeeeccccCC--------CCceEEEEEccCCC---E
Q psy10348 64 FHPQDFNLLLSVSKD----------------HTLRLWNIKTDICIAIFGGVEGH--------RDEVLSADFDLLGT---K 116 (291)
Q Consensus 64 ~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~---~ 116 (291)
+.+ +...++.+..+ +.|..+|.++|+.+..++. ..| ..++. +....+|+ .
T Consensus 242 ~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~-~~~d~~d~~~~~~p~l-~~~~~~G~~~~~ 318 (571)
T 2ad6_A 242 YDP-KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK-TPHDEWDFAGVNQMVL-TDQPVNGKMTPL 318 (571)
T ss_dssp EET-TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES-STTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred EcC-CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC-CCCcccccccCCCCEE-EecccCCcEEEE
Confidence 666 44455555432 3699999999998887642 112 12222 22234674 5
Q ss_pred EEEEecCCcEEEEeccCchhhhhh
Q psy10348 117 IMSCGMDHSLKLWDLTKPEIKDAC 140 (291)
Q Consensus 117 l~~~~~d~~i~v~d~~~~~~~~~~ 140 (291)
++.++.+|.+.++|..+++.+...
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEeCCCcEEEEEECCCCCEEeee
Confidence 778888999999999999876554
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.56 E-value=0.00031 Score=61.65 Aligned_cols=238 Identities=13% Similarity=0.097 Sum_probs=137.8
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-------eccceeEEEEecCCCcEEEEeecCCeEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-------HGHAINELKFHPQDFNLLLSVSKDHTLR 82 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 82 (291)
...|.++...+++ .+..|+.++-+.+||..+++....... ....|.++...+ ++.+.+ |+.+| |.
T Consensus 214 ~~~i~~i~~d~~g-----~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~G-l~ 285 (795)
T 4a2l_A 214 TKQIQAILQQSPT-----RIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWI-GTFND-LN 285 (795)
T ss_dssp CCCEEEEEEEETT-----EEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEE-EESSC-EE
T ss_pred CCeeEEEEEcCCC-----CEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEE-EeCCh-hh
Confidence 4567777777666 566666555588999876654322211 135688998887 666544 44554 88
Q ss_pred EEECCCcceeeeecc----ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCc
Q psy10348 83 LWNIKTDICIAIFGG----VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQ 158 (291)
Q Consensus 83 vwd~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
+||..+++....... ..-....|.++...++|. |-.|+.++-|..|+..+..... +. ..+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~----~~~~~-------- 351 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKN-IR----NIPYK-------- 351 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEE-EC----CCTTS--------
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceE-Ec----CCCCC--------
Confidence 999876654332210 011346799999998886 4556667779999876543211 10 00000
Q ss_pred cccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecC
Q psy10348 159 KEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDY 236 (291)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 236 (291)
.......|.++..+ ...|..|+.++-|..||..+........... ..- ......|.. +..++
T Consensus 352 ---------~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~v~~--i~~d~ 415 (795)
T 4a2l_A 352 ---------NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQED-----ESARGIGSNNIKA--VYVDE 415 (795)
T ss_dssp ---------SSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-----------CCSCSCEEE--EEEET
T ss_pred ---------CCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCC-----CcccCCCCccEEE--EEEcC
Confidence 00134558888887 4466778888889999987653211100000 000 011233444 44556
Q ss_pred CCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEec---cccccceeeeEEccCCceee
Q psy10348 237 WQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSH---PRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 237 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~g~~l~ 290 (291)
+++.|.+|+.++-|..||..+++. ..+.. ......|.++...++|++.+
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~-----~~~~~~~~~l~~~~v~~i~~d~~g~lwi 467 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQV-----ENFNQRNSQLVNENVYAILPDGEGNLWL 467 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCE-----EEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred CCCEEEEEeCcCceeEEeCCCCcE-----EEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence 677677788777799999887642 12211 01235688888888887654
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.55 E-value=2.5e-05 Score=65.74 Aligned_cols=61 Identities=10% Similarity=0.039 Sum_probs=42.9
Q ss_pred CeEEEEECCCcceeeeeccccCCC--------CceEEEEEc-cCCC---EEEEEecCCcEEEEeccCchhhhhhc
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHR--------DEVLSADFD-LLGT---KIMSCGMDHSLKLWDLTKPEIKDACA 141 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 141 (291)
+.|..+|..+|+.+..++. ..|. .++. +... .+|+ .++.++.+|.++++|.++++.+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~-~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQH-TPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEES-STTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeC-CCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 6899999999999887742 1222 2222 2222 4664 78889999999999999998875543
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=3.8e-06 Score=72.00 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=54.1
Q ss_pred EEEeeeccCCCCCEEEEecCCC-------------------eEEEEccCCcceeEEEee--ec-------cceeEEEEec
Q psy10348 15 TCAWSMDLESGRPLLAVAGSRA-------------------VIRIFSPAFHACVRHFYG--HG-------HAINELKFHP 66 (291)
Q Consensus 15 ~~~~s~~~~~~~~~l~~~~~dg-------------------~i~vw~~~~~~~~~~~~~--~~-------~~v~~~~~~~ 66 (291)
.+++.|+. .+++.+..++ .|..+|.++|+.+..++. |. .+.....+..
T Consensus 234 ~~a~d~~~----~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~ 309 (668)
T 1kv9_A 234 SMAYDPEL----DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI 309 (668)
T ss_dssp CEEEETTT----TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ceEEcCCC----CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc
Confidence 45677665 4888887766 499999999999888864 21 2223233333
Q ss_pred CCCc---EEEEeecCCeEEEEECCCcceeee
Q psy10348 67 QDFN---LLLSVSKDHTLRLWNIKTDICIAI 94 (291)
Q Consensus 67 ~~~~---~l~s~~~dg~i~vwd~~~~~~~~~ 94 (291)
+++ .++.++.+|.+.++|..+|+.+..
T Consensus 310 -~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 310 -DGKPRKVLMQAPKNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp -TTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred -CCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence 444 688999999999999999988744
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.53 E-value=0.00015 Score=56.10 Aligned_cols=203 Identities=8% Similarity=-0.092 Sum_probs=116.8
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC---cceeEE-EeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---HACVRH-FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~---~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
....+++|.+... .++++-...+.|..+++.. +..... +...-.....+++.+.++.+.++-..++.|.+.++
T Consensus 30 ~~p~g~~~d~~~~---~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 30 RNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SSEEEEEEETTTT---EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCC---EEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 4566888887653 3555556678999999875 122222 32222456789998745566666667789999998
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecC--CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD--HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
........+ .........++++|.+..|+.+... +.|..+++.... ...+.
T Consensus 107 ~g~~~~~~~---~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~----------------------- 159 (316)
T 1ijq_A 107 KGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV----------------------- 159 (316)
T ss_dssp TSSSEEEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEE-----------------------
T ss_pred CCCceEEEE---ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEE-----------------------
Confidence 744333332 2233567899999977766665543 577777765322 11110
Q ss_pred cccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 165 FSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
...-.....++++ ++.| ++-...+.|..+|+..... +.+............+++ + .+.++
T Consensus 160 ----~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~----------~~~~~~~~~~~~P~giav--~-~~~ly 222 (316)
T 1ijq_A 160 ----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHPFSLAV--F-EDKVF 222 (316)
T ss_dssp ----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEECTTTTSSEEEEEE--E-TTEEE
T ss_pred ----ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce----------EEEeecCCccCCcEEEEE--E-CCEEE
Confidence 0012235678887 4444 4555577999999864322 112221111122233444 3 25566
Q ss_pred EEEcCCCcEEEEEcCCCCC
Q psy10348 242 AVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~ 260 (291)
++-...+.|..++..+++.
T Consensus 223 ~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 223 WTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEETTTTEEEEEETTTCCC
T ss_pred EEECCCCeEEEEeCCCCcc
Confidence 6666778899999876654
No 262
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.52 E-value=9.3e-05 Score=57.26 Aligned_cols=189 Identities=12% Similarity=0.132 Sum_probs=115.5
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCC----c---EEEEeec---CCeEEEEECC--Ccceeee
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF----N---LLLSVSK---DHTLRLWNIK--TDICIAI 94 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~---~l~s~~~---dg~i~vwd~~--~~~~~~~ 94 (291)
.+++.....+-+.+||+ +|+.++.+.. +.++.+..-| +- . ++++... +.+|.+|++. ++ .+..
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~ 115 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQS 115 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceee
Confidence 45666667789999999 7998888863 5667777766 32 1 3333333 5789999773 33 3444
Q ss_pred eccc--c-CCC-CceEEEEE--ccC-CC-EEEEEecCCcEEEEeccC-------chhhhhhccccccCCCCccccccCcc
Q psy10348 95 FGGV--E-GHR-DEVLSADF--DLL-GT-KIMSCGMDHSLKLWDLTK-------PEIKDACAESYTFNPARSTRPFDTQK 159 (291)
Q Consensus 95 ~~~~--~-~~~-~~i~~~~~--~~~-~~-~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
+... . ... ..+..+++ +|. +. ++++...+|.+..|++.. .+.++++.
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~------------------ 177 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK------------------ 177 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE------------------
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec------------------
Confidence 4110 0 011 55667777 775 43 688888899999999842 22233322
Q ss_pred ccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC--CcccEEEEEEEec
Q psy10348 160 EHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF--KDCEIWFIRFSMD 235 (291)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~ 235 (291)
-...+..+..+ ...|+.+-++.-|..++.+..... ..+.+..+.. -...+..+.+-..
T Consensus 178 -----------lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~-------~~~~v~~~~~g~l~aDvEGLai~~~ 239 (355)
T 3amr_A 178 -----------MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGS-------NGTVIDRADGRHLTRDIEGLTIYYA 239 (355)
T ss_dssp -----------CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCS-------CCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred -----------CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCC-------CceEEEEecCCccccCcceEEEEec
Confidence 12346666666 568888988877777775422100 0022433321 1235677777666
Q ss_pred CCCc-EEEEEc-CCCcEEEEEcC
Q psy10348 236 YWQK-ILAVGN-QSGRTYVWDLD 256 (291)
Q Consensus 236 ~~~~-~l~~~~-~dg~i~vwd~~ 256 (291)
++++ ||++++ .++++.+||..
T Consensus 240 ~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 240 ADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp GGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCCEEEEEEcCCCCEEEEEECC
Confidence 6666 666665 67799999997
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.48 E-value=0.00038 Score=61.16 Aligned_cols=234 Identities=8% Similarity=-0.028 Sum_probs=133.5
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee--------eccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG--------HGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
...|.++...+++ .|..|+.++-|..|+..+++....... ....|.++...+ ++.+|..|+.++-|
T Consensus 356 ~~~V~~i~~d~~g-----~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 356 DNVVSCIVEDKDK-----NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGL 429 (795)
T ss_dssp CSSEEEEEECTTS-----CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEE
T ss_pred CCeeEEEEECCCC-----CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCce
Confidence 3568888877766 577788887899999887654332211 135688998887 77746667777779
Q ss_pred EEEECCCcceeeeecc-ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccc
Q psy10348 82 RLWNIKTDICIAIFGG-VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKE 160 (291)
Q Consensus 82 ~vwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
.++|..+++....... .......|.++...++|.+.+.. . +-+.+||..+++....... ..+
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~---~~~------------ 492 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKE---KDG------------ 492 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBC---TTC------------
T ss_pred eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEcccc---ccc------------
Confidence 9999887764332210 01234679999988888755544 4 4588899876543211000 000
Q ss_pred cCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCc
Q psy10348 161 HFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQK 239 (291)
Q Consensus 161 ~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (291)
.......|.++..+ ...+..|+. +-|..||..+... ...... ..-......+ .++..+++|.
T Consensus 493 -------~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~-~~~~~~------~~~~l~~~~i--~~i~~d~~g~ 555 (795)
T 4a2l_A 493 -------TPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI-QKASIL------PVSNVTKLFT--NCIYEASNGI 555 (795)
T ss_dssp -------CBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE-EECCCS------CSCGGGGSCE--EEEEECTTSC
T ss_pred -------cccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE-EEecCC------CCCCCCCCee--EEEEECCCCC
Confidence 00133568888877 334444555 5577888755421 000000 0000112233 3455667677
Q ss_pred EEEEEcCCCcEEEEEcCCCCCCcceeEEEec-cc-cccceeeeEEccCCceee
Q psy10348 240 ILAVGNQSGRTYVWDLDVQDPSSIKFQILSH-PR-CMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 240 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~ 290 (291)
+.+.. .. -|..||..+.+ . ..+.. .+ ....|.++...++|++.+
T Consensus 556 lWigT-~~-Gl~~~d~~~~~----~-~~~~~~~gl~~~~i~~i~~d~~g~lWi 601 (795)
T 4a2l_A 556 IWVGT-RE-GFYCFNEKDKQ----I-KRYNTTNGLPNNVVYGILEDSFGRLWL 601 (795)
T ss_dssp EEEEE-SS-CEEEEETTTTE----E-EEECGGGTCSCSCEEEEEECTTSCEEE
T ss_pred EEEEe-CC-CceeECCCCCc----E-EEeCCCCCCchhheEEEEECCCCCEEE
Confidence 55544 34 48888877652 1 22211 11 124578888888887654
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.44 E-value=0.00035 Score=55.97 Aligned_cols=205 Identities=9% Similarity=-0.092 Sum_probs=119.6
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
...+..++|.+... .++.+-...+.|+.+++... .....+.........+++.+..+.+.++-...+.|.+.+
T Consensus 111 ~~~~~~l~~d~~~~---~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 111 LRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp CSCEEEEEEETTTT---EEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred cCcceEEeeeeccC---ceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 45677888887653 35555556788988888642 222233323345678899874566666666778999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
++.......+ .........++++|.+.+|+.+.. .+.|...++..........
T Consensus 188 ~~g~~~~~l~---~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~---------------------- 242 (400)
T 3p5b_L 188 TKGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---------------------- 242 (400)
T ss_dssp TTTCSEEEEE---ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC----------------------
T ss_pred CCCCceEEEE---eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE----------------------
Confidence 8755443333 233455789999997777766653 3678888776433211100
Q ss_pred ccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (291)
..-.....|+++ ++.| ++-...+.|..+|+..... ..+......-.....+++ . .+.+
T Consensus 243 ------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~----------~~~~~~~~~l~~P~gl~v--~-~~~l 303 (400)
T 3p5b_L 243 ------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHPFSLAV--F-EDKV 303 (400)
T ss_dssp ------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC----------EEEEECSSTTSSEEEEEE--E-TTEE
T ss_pred ------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc----------EEEEeCCCCCCCCEEEEE--e-CCEE
Confidence 012345678887 4444 4445578899999865432 112211111112223333 2 2455
Q ss_pred EEEEcCCCcEEEEEcCCCCCC
Q psy10348 241 LAVGNQSGRTYVWDLDVQDPS 261 (291)
Q Consensus 241 l~~~~~dg~i~vwd~~~~~~~ 261 (291)
+.+-...+.|..+|..+++..
T Consensus 304 ywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 304 FWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEESSSCSEEEEESSSCCCC
T ss_pred EEecCCCCeEEEEEcCCCCce
Confidence 666667788999997777543
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.43 E-value=9.4e-05 Score=62.35 Aligned_cols=110 Identities=14% Similarity=0.082 Sum_probs=73.9
Q ss_pred EEEEec------CCCeEEEEccCCcceeEEEeeeccce--------------------------------------eEEE
Q psy10348 28 LLAVAG------SRAVIRIFSPAFHACVRHFYGHGHAI--------------------------------------NELK 63 (291)
Q Consensus 28 ~l~~~~------~dg~i~vw~~~~~~~~~~~~~~~~~v--------------------------------------~~~~ 63 (291)
.+++++ .+|.|+-+|.++|+.+..+....... ..++
T Consensus 168 ~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a 247 (599)
T 1w6s_A 168 KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYA 247 (599)
T ss_dssp EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCcccccee
Confidence 555555 37999999999999988776321110 1345
Q ss_pred EecCCCcEEEEeecC----------------CeEEEEECCCcceeeeeccccCCC--------CceEEEEEc-cCC---C
Q psy10348 64 FHPQDFNLLLSVSKD----------------HTLRLWNIKTDICIAIFGGVEGHR--------DEVLSADFD-LLG---T 115 (291)
Q Consensus 64 ~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~---~ 115 (291)
+.+ ...+++.+..+ +.|..+|.++|+.+..++. ..|. .++. +... .+| .
T Consensus 248 ~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~-~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 248 YDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK-TPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp EET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES-STTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred EeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec-CCCccccccCCCccEE-EeccccCCcEEE
Confidence 666 45566666554 3799999999999887742 2221 2222 2222 467 4
Q ss_pred EEEEEecCCcEEEEeccCchhhhhh
Q psy10348 116 KIMSCGMDHSLKLWDLTKPEIKDAC 140 (291)
Q Consensus 116 ~l~~~~~d~~i~v~d~~~~~~~~~~ 140 (291)
.++.++.+|.+.++|.++++.+...
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCcEEEEEECCCCCEeecc
Confidence 6777889999999999999877554
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.41 E-value=0.00024 Score=52.79 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=116.6
Q ss_pred eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133 (291)
Q Consensus 54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 133 (291)
+-.+.+..++|+|+++.++++...++.|...|.. ++.+..+. ..-......+++.+++.++++.-.++.+.++++..
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~--l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP--LDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE--CSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe--cCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 4446799999999555667778888999999998 77777662 12235678899998887766665678899998876
Q ss_pred chhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCC
Q psy10348 134 PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNE 211 (291)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (291)
...+..... ..+ + +. ....+.....++|+ ++.|+++.......+|.+..... .
T Consensus 101 ~~~i~~~~~-~~~----------------~-~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~----~-- 155 (255)
T 3qqz_A 101 NSEVKILKK-IKI----------------P-LQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS----S-- 155 (255)
T ss_dssp TCCEEEEEE-EEC----------------C-CS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC----S--
T ss_pred CCeeeeeee-ecc----------------c-cc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc----C--
Confidence 542111110 000 0 00 01134457889998 54666666554445554431100 0
Q ss_pred Cceeeeee--e--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc-cc------ccceeee
Q psy10348 212 TNVTIINR--L--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP-RC------MSAVRQT 280 (291)
Q Consensus 212 ~~~~~~~~--~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~------~~~v~~~ 280 (291)
.....+.. + .........+.+.+. .+++++.......+.++|.... ....+... +. -...-.|
T Consensus 156 ~~l~i~~~~~~~~~~~~~d~S~l~~dp~-tg~lliLS~~s~~L~~~d~~g~-----~~~~~~L~~g~~~l~~~~~qpEGi 229 (255)
T 3qqz_A 156 NELHISKDKALQRQFTLDDVSGAEFNQQ-KNTLLVLSHESRALQEVTLVGE-----VIGEMSLTKGSRGLSHNIKQAEGV 229 (255)
T ss_dssp SCCEEEECHHHHHTCCSSCCCEEEEETT-TTEEEEEETTTTEEEEECTTCC-----EEEEEECSTTGGGCSSCCCSEEEE
T ss_pred CceeeecchhhccccccCCceeEEEcCC-CCeEEEEECCCCeEEEEcCCCC-----EEEEEEcCCccCCcccccCCCCee
Confidence 00011100 0 011122334445442 3667777778888999987653 12333322 11 1256789
Q ss_pred EEccCCceee
Q psy10348 281 TLSKNGNVLL 290 (291)
Q Consensus 281 ~~s~~g~~l~ 290 (291)
+|.++|+..+
T Consensus 230 a~d~~G~lyI 239 (255)
T 3qqz_A 230 AMDASGNIYI 239 (255)
T ss_dssp EECTTCCEEE
T ss_pred EECCCCCEEE
Confidence 9999998654
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.39 E-value=8.5e-05 Score=62.62 Aligned_cols=111 Identities=10% Similarity=0.005 Sum_probs=72.1
Q ss_pred CEEEEecC-CCeEEEEcc-CCcceeEEEeeeccc-----------eeEEEEecCCCcE----EEEeecCCeEEEEECCCc
Q psy10348 27 PLLAVAGS-RAVIRIFSP-AFHACVRHFYGHGHA-----------INELKFHPQDFNL----LLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 27 ~~l~~~~~-dg~i~vw~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~----l~s~~~dg~i~vwd~~~~ 89 (291)
..+++++. ++.|.-+|. ++|+.+.++...... ...+++.| .+.. ++.++.|+.|..+|.++|
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEcCCCEEEEEECCCC
Confidence 36777777 899999999 899998877633211 12345544 2333 777888999999999999
Q ss_pred ceeeeeccccCCC--CceEE-EEEccCCCEEEEEe------cCCcEEEEeccCchhhhhhc
Q psy10348 90 ICIAIFGGVEGHR--DEVLS-ADFDLLGTKIMSCG------MDHSLKLWDLTKPEIKDACA 141 (291)
Q Consensus 90 ~~~~~~~~~~~~~--~~i~~-~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~ 141 (291)
+.+..... ..+. ..+.+ -.. .++ .+++++ .++.|+.+|.++++.+..+.
T Consensus 142 ~~~W~~~~-~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 142 ETVWKVEN-SDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp CEEEEEEC-CCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEeecC-CCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 98876531 1110 01111 011 133 555554 38999999999999776554
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.34 E-value=0.00019 Score=62.85 Aligned_cols=227 Identities=11% Similarity=-0.013 Sum_probs=129.7
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEE---eeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHF---YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
...|.++...+++ .|..|+.++-|..|+..+++..... ......|.++...+ ++.+.+ |+.++-+..+|.
T Consensus 362 ~~~v~~i~~d~~g-----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gt~~~Gl~~~~~ 434 (781)
T 3v9f_A 362 NKVVSSVCDDGQG-----KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLWF-GTYLGNISYYNT 434 (781)
T ss_dssp SSCEEEEEECTTS-----CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSCEEE-EETTEEEEEECS
T ss_pred CcceEEEEEcCCC-----CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCCEEE-EeccCCEEEEcC
Confidence 3567888777666 5667776677899998755432211 12235788888876 655544 666667899998
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
.+++...... .......|.++...+++.+.+ |+. +-+..+|..+++....... +.
T Consensus 435 ~~~~~~~~~~-~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~-----~~----------------- 489 (781)
T 3v9f_A 435 RLKKFQIIEL-EKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDT-----SN----------------- 489 (781)
T ss_dssp SSCEEEECCS-TTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECT-----TT-----------------
T ss_pred CCCcEEEecc-CCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccC-----cc-----------------
Confidence 7665433210 012346799998888776444 454 5588899876553211000 00
Q ss_pred cccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC----CcccEEEEEEEecCCCcEE
Q psy10348 167 TRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF----KDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~l 241 (291)
.......|.++..+ ...|..|+.++-|..||..+.+. ..+.. ....| .++..+++|.+.
T Consensus 490 -~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-------------~~~~~~~~l~~~~i--~~i~~d~~g~lW 553 (781)
T 3v9f_A 490 -SQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-------------RKFNQYEGFCSNTI--NQIYRSSKGQMW 553 (781)
T ss_dssp -SSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-------------EEECTTTTCSCSCE--EEEEECTTSCEE
T ss_pred -cccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-------------EEccCCCCCCCCee--EEEEECCCCCEE
Confidence 00123557888777 44555566645577788765432 22211 12233 345566667655
Q ss_pred EEEcCCCcEEEEEcCCCCCCcceeEEEec-cc-cccceeeeEEccCCceee
Q psy10348 242 AVGNQSGRTYVWDLDVQDPSSIKFQILSH-PR-CMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~g~~l~ 290 (291)
++. .+|.|..||..+++. ..+.. .+ ....|.++...++|++.+
T Consensus 554 i~T-~~Glv~~~d~~~~~~-----~~~~~~~gl~~~~i~~i~~d~~g~lW~ 598 (781)
T 3v9f_A 554 LAT-GEGLVCFPSARNFDY-----QVFQRKEGLPNTHIRAISEDKNGNIWA 598 (781)
T ss_dssp EEE-TTEEEEESCTTTCCC-----EEECGGGTCSCCCCCEEEECSSSCEEE
T ss_pred EEE-CCCceEEECCCCCcE-----EEccccCCCCCceEEEEEECCCCCEEE
Confidence 544 477658888876532 22221 11 123577788888877654
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.00059 Score=53.60 Aligned_cols=196 Identities=12% Similarity=-0.022 Sum_probs=111.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
+...|.+..++ .+|+.+. ...|+..++........+.. ......++|.+.++.++++-...+.|..+++..+.
T Consensus 34 d~~~C~~~~~~-----~~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 34 DRRSCKALGPE-----PVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp TSSCEEESSSC-----CEEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCcccccccC-----ceeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 34455555553 3555543 35688888876554443433 34578999998566666666677899999988655
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEE-EecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMS-CGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (291)
....+ .........+++.+.+..|+. -...+.|.+.++........+.
T Consensus 107 ~~~~~---~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~---------------------------- 155 (349)
T 3v64_C 107 VEEVV---STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---------------------------- 155 (349)
T ss_dssp CEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------------
T ss_pred ceEEE---eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe----------------------------
Confidence 43333 222344568888876655544 4456789998876543111100
Q ss_pred ccCcceeEEEEc--CC-EEEEecCC-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-
Q psy10348 170 IHRNYVDCVRWL--GD-FVLSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG- 244 (291)
Q Consensus 170 ~~~~~v~~~~~~--~~-~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~- 244 (291)
........++++ +. ++++-... +.|..+++...... .+ ....-.... .++++|++..|+.+
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~----------~~--~~~~~~~Pn--Gla~d~~~~~lY~aD 221 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR----------II--ADTHLFWPN--GLTIDYAGRRMYWVD 221 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE----------ES--CCSSCSCEE--EEEEETTTTEEEEEE
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE----------EE--EECCCCCcc--eEEEeCCCCEEEEEE
Confidence 012234667776 33 44444444 78888887653221 11 111111122 34555546655554
Q ss_pred cCCCcEEEEEcCCC
Q psy10348 245 NQSGRTYVWDLDVQ 258 (291)
Q Consensus 245 ~~dg~i~vwd~~~~ 258 (291)
+..+.|..+++...
T Consensus 222 ~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 222 AKHHVIERANLDGS 235 (349)
T ss_dssp TTTTEEEEEETTSC
T ss_pred CCCCEEEEEeCCCC
Confidence 46678999998754
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.31 E-value=0.00058 Score=52.94 Aligned_cols=113 Identities=7% Similarity=0.034 Sum_probs=70.3
Q ss_pred eeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-----eccceeEEEEecCCCcEEEEeec--------
Q psy10348 12 NFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-----HGHAINELKFHPQDFNLLLSVSK-------- 77 (291)
Q Consensus 12 ~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~-------- 77 (291)
....+++.+ ++ .|+++...+.|..+|..+++. ..+.. .......+++.+.++.+.++-..
T Consensus 81 ~p~gi~~~~~~g-----~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 81 RTYDISYNLQNN-----QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp CEEEEEEETTTT-----EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred CCceEEEcCCCC-----cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 467888887 55 455554445588888775543 22321 11246778888734555555322
Q ss_pred ---------CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccCc
Q psy10348 78 ---------DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTKP 134 (291)
Q Consensus 78 ---------dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~ 134 (291)
++.|..+|..+++..... ........++++|+++.|+.+ ...+.|.+|++...
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~----~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLL----KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEE----EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred ceehcccCCCceEEEEeCCCCEEEEec----cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 367888888766543322 112334578999999866655 55688999998753
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=0.00064 Score=55.06 Aligned_cols=152 Identities=7% Similarity=0.039 Sum_probs=89.5
Q ss_pred eeEEEEeee-ccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeec-CC----eEEEEE
Q psy10348 12 NFYTCAWSM-DLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK-DH----TLRLWN 85 (291)
Q Consensus 12 ~i~~~~~s~-~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg----~i~vwd 85 (291)
....++++| +.. .|+++...+.|+.+|+++++... +.........++|++ +++.|+.+.. ++ .+.+.+
T Consensus 138 ~P~~lavdp~~~g----~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHN----HLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEE----EEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCC----eEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEe
Confidence 446788997 332 55555444889999988665443 333445678999999 7785555543 22 233344
Q ss_pred CCCccee--eeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 86 IKTDICI--AIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 86 ~~~~~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
..+... ..+. .......++++| ++.++++-..++.|..++...+.......
T Consensus 212 -~~g~~~~~~~l~----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~--------------------- 265 (430)
T 3tc9_A 212 -RESGFKVITELT----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT--------------------- 265 (430)
T ss_dssp -GGGTSCSEEEEE----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE---------------------
T ss_pred -CCCceeeeeeec----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE---------------------
Confidence 333322 2221 123456788999 56655555567889999987654211100
Q ss_pred cccccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCC
Q psy10348 163 PQFSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGR 201 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~ 201 (291)
.........++|+ ++ ++++-...+.|..++...
T Consensus 266 ------~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 266 ------IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ------CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ------cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 0011234578887 66 455555678899987653
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.27 E-value=9.5e-05 Score=62.16 Aligned_cols=58 Identities=10% Similarity=-0.084 Sum_probs=41.5
Q ss_pred CeEEEEccCCcceeEEEeeec----------cceeEEEEecCCC---cEEEEeecCCeEEEEECCCcceeeee
Q psy10348 36 AVIRIFSPAFHACVRHFYGHG----------HAINELKFHPQDF---NLLLSVSKDHTLRLWNIKTDICIAIF 95 (291)
Q Consensus 36 g~i~vw~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~ 95 (291)
+.|..+|.++|+.+..++... .++. +.... ++ ..++.++.+|.+.++|..+|+.+..+
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 369999999999988776321 1221 22223 55 36778899999999999999887765
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.26 E-value=0.0018 Score=56.44 Aligned_cols=205 Identities=9% Similarity=-0.076 Sum_probs=116.4
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc----ceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH----ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
...+..++|.+... .++++-...+.|+.+++... .....+.........|++.+..++++++-...+.|.+.+
T Consensus 423 ~~~~~gl~~d~~~~---~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 423 LRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSSEEEEEEETTTT---EEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEeecccCC---eeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 34566788877543 35555566678888887642 222333323455678999884556666767788999999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFP 163 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
+........+ .........|++.|.+.+|+.+.. .+.|...++........+.
T Consensus 500 ldG~~~~~l~---~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~---------------------- 554 (791)
T 3m0c_C 500 TKGVKRKTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---------------------- 554 (791)
T ss_dssp TTSSSEEEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC----------------------
T ss_pred CCCCeEEEEE---eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe----------------------
Confidence 8754433333 234456889999998777766653 2678887776433211110
Q ss_pred ccccccccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348 164 QFSTRDIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 164 ~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (291)
..-.....|+++ .+.| ++-...+.|..+++...... .+..-...-.... .++... +.+
T Consensus 555 ------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~----------~v~~~~~~l~~P~--glav~~-~~l 615 (791)
T 3m0c_C 555 ------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK----------TILEDEKRLAHPF--SLAVFE-DKV 615 (791)
T ss_dssp ------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------EEEECTTTTSSEE--EEEEET-TEE
T ss_pred ------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE----------EEecCCCccCCCC--EEEEeC-CEE
Confidence 012345677776 4444 44455678999988654331 1211111111112 233331 344
Q ss_pred EEEEcCCCcEEEEEcCCCCCC
Q psy10348 241 LAVGNQSGRTYVWDLDVQDPS 261 (291)
Q Consensus 241 l~~~~~dg~i~vwd~~~~~~~ 261 (291)
+++-...+.|...|..+++.+
T Consensus 616 YwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 616 FWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEETTTTEEEEEETTTCCCC
T ss_pred EEEECCCCEEEEEeCCCCcce
Confidence 455556788888887777543
No 274
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.25 E-value=4.9e-05 Score=64.01 Aligned_cols=58 Identities=5% Similarity=0.002 Sum_probs=42.5
Q ss_pred CeEEEEccCCcceeEEEee--ec--------cceeEEEEe-cCCC---cEEEEeecCCeEEEEECCCcceeeee
Q psy10348 36 AVIRIFSPAFHACVRHFYG--HG--------HAINELKFH-PQDF---NLLLSVSKDHTLRLWNIKTDICIAIF 95 (291)
Q Consensus 36 g~i~vw~~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~ 95 (291)
+.|.-+|.++|+.+..++. |. .++. +... . ++ ..++.++.+|.++++|.++|+.+..+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 6899999999999888763 21 1221 1222 3 55 47888999999999999999887665
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=0.00093 Score=51.39 Aligned_cols=200 Identities=9% Similarity=0.016 Sum_probs=103.9
Q ss_pred cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-
Q psy10348 46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH- 124 (291)
Q Consensus 46 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~- 124 (291)
.+.+..+.. ......++|++ +++++++-..++.|..||... +....+ .....+..+++.++|+++++.....
T Consensus 22 ~~~~~~~p~-~~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~----~~~~~p~gia~~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 22 AKIITSFPV-NTFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHA----TVEGKVSGLAFTSNGDLVATGWNADS 94 (306)
T ss_dssp EEEEEEECT-TCCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEE----ECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred ceEeEeCCC-CCCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEE----eCCCCceeEEEcCCCcEEEEeccCCc
Confidence 344445532 24567899999 888777766789999999874 433333 2235688999999998655544322
Q ss_pred -cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEE-EcCC-EEEEecCCCeEEEecCCC
Q psy10348 125 -SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVR-WLGD-FVLSKSCENCIICWKPGR 201 (291)
Q Consensus 125 -~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~l~~~~~d~~i~iwd~~~ 201 (291)
.|..+|..+++....... + .......++ +.+. .+++...++.|.++|...
T Consensus 95 ~~v~~~d~~~g~~~~~~~~-----~----------------------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 95 IPVVSLVKSDGTVETLLTL-----P----------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CEEEEEECTTSCEEEEEEC-----T----------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEcCCCCeEEEEEeC-----C----------------------CccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 366667666653211100 0 000112222 2233 344444578888888764
Q ss_pred CCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCC-CCCCcceeEEEeccccccceee
Q psy10348 202 LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDV-QDPSSIKFQILSHPRCMSAVRQ 279 (291)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~ 279 (291)
.......... ... .......-.....+ + |++++|+++ ...+.|..+++.. ++. ... ..+.. ......
T Consensus 148 ~~~~v~~~~~-~~~-~~~~~~~~~~pngi--s--~dg~~lyv~d~~~~~I~~~~~~~~g~~-~~~-~~~~~---~~~P~g 216 (306)
T 2p4o_A 148 PSGSIWLEHP-MLA-RSNSESVFPAANGL--K--RFGNFLYVSNTEKMLLLRIPVDSTDKP-GEP-EIFVE---QTNIDD 216 (306)
T ss_dssp TEEEEEEECG-GGS-CSSTTCCSCSEEEE--E--EETTEEEEEETTTTEEEEEEBCTTSCB-CCC-EEEEE---SCCCSS
T ss_pred CcEeEEEECC-ccc-cccccCCCCcCCCc--C--cCCCEEEEEeCCCCEEEEEEeCCCCCC-Ccc-EEEec---cCCCCC
Confidence 3110000000 000 00000011112222 3 447666554 5678999999875 321 111 11111 134667
Q ss_pred eEEccCCceee
Q psy10348 280 TTLSKNGNVLL 290 (291)
Q Consensus 280 ~~~s~~g~~l~ 290 (291)
++++++|++.+
T Consensus 217 i~vd~dG~l~v 227 (306)
T 2p4o_A 217 FAFDVEGNLYG 227 (306)
T ss_dssp EEEBTTCCEEE
T ss_pred eEECCCCCEEE
Confidence 88888887665
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.0032 Score=55.19 Aligned_cols=227 Identities=11% Similarity=-0.025 Sum_probs=131.4
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe--------------eeccceeEEEEecCCCcEEEEe
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY--------------GHGHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~s~ 75 (291)
...|+++....++ .|..|+..+-|.+++..+++...... .....|.++...+ ++. |-.|
T Consensus 257 ~~~i~~i~~d~~g-----~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~-lWig 329 (781)
T 3v9f_A 257 SSYIFSIKQLKDN-----KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNN-IWIG 329 (781)
T ss_dssp CCCEEEEEECTTS-----EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCC-EEEE
T ss_pred CceEEEEEECCCC-----CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCC-EEEE
Confidence 3567787777666 67777775678889987665322111 1235688888887 655 4556
Q ss_pred ecCCeEEEEECCCcceeeeec------cccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCC
Q psy10348 76 SKDHTLRLWNIKTDICIAIFG------GVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPA 149 (291)
Q Consensus 76 ~~dg~i~vwd~~~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 149 (291)
+.++-|..++...+....... ...-....|.++...++|. |..|+.++-|..||..++..... . .+.
T Consensus 330 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~-~-----~~~ 402 (781)
T 3v9f_A 330 TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYN-K-----ENR 402 (781)
T ss_dssp EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC----------
T ss_pred ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEc-c-----CCC
Confidence 666678889877554322210 0011345699999888776 45566566799999876542210 0 000
Q ss_pred CccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec---CCcc
Q psy10348 150 RSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN---FKDC 225 (291)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 225 (291)
......|.++..+ ...|..|+.++-|..+|..+.+. ..+. ....
T Consensus 403 -------------------~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-------------~~~~~~~~~~~ 450 (781)
T 3v9f_A 403 -------------------ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-------------QIIELEKNELL 450 (781)
T ss_dssp --------------------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-------------EECCSTTTCCC
T ss_pred -------------------CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-------------EEeccCCCCCC
Confidence 1134568888887 55666677777888998766532 1121 1223
Q ss_pred cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecc---ccccceeeeEEccCCceee
Q psy10348 226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHP---RCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~ 290 (291)
.|. ++..++++. |..|+.. -|..||..+++.. ...... .....|.++...++|++.+
T Consensus 451 ~v~--~i~~d~~g~-lwigt~~-Gl~~~~~~~~~~~----~~~~~~~~~~~~~~i~~i~~d~~g~lWi 510 (781)
T 3v9f_A 451 DVR--VFYEDKNKK-IWIGTHA-GVFVIDLASKKVI----HHYDTSNSQLLENFVRSIAQDSEGRFWI 510 (781)
T ss_dssp CEE--EEEECTTSE-EEEEETT-EEEEEESSSSSCC----EEECTTTSSCSCSCEEEEEECTTCCEEE
T ss_pred eEE--EEEECCCCC-EEEEECC-ceEEEeCCCCeEE----ecccCcccccccceeEEEEEcCCCCEEE
Confidence 343 445566565 4445554 5888998776431 111111 1135688888888887654
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.13 E-value=0.0015 Score=50.48 Aligned_cols=185 Identities=7% Similarity=-0.109 Sum_probs=103.3
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC---cceeeeeccccCCCCc
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT---DICIAIFGGVEGHRDE 104 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~ 104 (291)
+|+.+.. ..|+..++++.+....+. .......++|.+.++.++++-..++.|..+++.. +.....+- ...-..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~--~~~~~~ 78 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--SRDIQA 78 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE--CSSCSC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE--eCCCCC
Confidence 4444443 568999998776655544 3456789999984556666666678999999875 12222220 222234
Q ss_pred eEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--
Q psy10348 105 VLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-- 181 (291)
Q Consensus 105 i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 181 (291)
...+++.+.+..|+.+ ...+.|.++++...... .+.. ........++.+
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~---------------------------~~~~~P~~iavdp~ 130 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFR---------------------------ENGSKPRAIVVDPV 130 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-EEEE---------------------------CTTCCEEEEEEETT
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE-EEEE---------------------------CCCCCcceEEeCCC
Confidence 5788888765555444 55788999987643211 1100 011234567775
Q ss_pred CCEEEEecC-C-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCC
Q psy10348 182 GDFVLSKSC-E-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQ 258 (291)
Q Consensus 182 ~~~l~~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~ 258 (291)
+..|+.... . +.|...++..... +.+. ...-.... .++++|++..|+.+ +..+.|..+|+...
T Consensus 131 ~g~ly~~d~~~~~~I~~~~~dG~~~----------~~~~--~~~~~~P~--gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 131 HGFMYWTDWGTPAKIKKGGLNGVDI----------YSLV--TENIQWPN--GITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCE----------EEEE--CSSCSCEE--EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEccCCCCeEEEEcCCCCCe----------EEEE--ECCCCCce--EEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 344443333 3 6788887654321 1111 11111222 34555656666554 46679999998753
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.13 E-value=0.0019 Score=51.48 Aligned_cols=184 Identities=12% Similarity=-0.039 Sum_probs=104.7
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEE
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~ 107 (291)
+|+.+. ...|+..++........+.. ......++|.+.++.++++-...+.|..+++..+.....+ .........
T Consensus 89 ~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~---~~~~~~p~g 163 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV---STGLESPGG 163 (386)
T ss_dssp EEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE---CSSCSCCCC
T ss_pred eeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE---eCCCCCccE
Confidence 555444 35788889876655444433 3457899999856666666667789999998865543333 222334567
Q ss_pred EEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCE
Q psy10348 108 ADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDF 184 (291)
Q Consensus 108 ~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 184 (291)
+++.+.+..|+.+ ...+.|.+.++........+. ........++++ +..
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~----------------------------~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----------------------------QSLEKPRAIALHPMEGT 215 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC----------------------------SSCSCEEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec----------------------------CCCCCCcEEEEEcCCCe
Confidence 8888766555444 446778888876433111100 012234667776 344
Q ss_pred -EEEecCC-CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCC
Q psy10348 185 -VLSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQ 258 (291)
Q Consensus 185 -l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~ 258 (291)
+++-... +.|..+++...... .+. ...-..... ++++|++..|+.+ +..+.|..+++...
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~~----------~~~--~~~~~~PnG--lavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGRR----------IIA--DTHLFWPNG--LTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSCE----------EEE--CSSCSCEEE--EEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred EEEeccCCCCEEEEEeCCCCCcE----------EEE--ECCCCCeee--EEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 4443334 67888887654221 111 111112233 4444445555554 46678999998754
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.12 E-value=4.2e-05 Score=65.86 Aligned_cols=202 Identities=9% Similarity=-0.065 Sum_probs=108.1
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC----cceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF----HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
..+..++|.+... .++++-...+.|+.+++.. ......+.........|++.+..+.++++-...+.|.+.++
T Consensus 406 ~~p~gla~d~~~~---~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTTT---EEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cceEEEccccccC---eEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 3455778877653 2344434567888888764 22222222112335678888645666666666788999998
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
........+ .........++++|.+.+|+.+.. .+.|..+++...... .+.
T Consensus 483 dg~~~~~l~---~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~----------------------- 535 (699)
T 1n7d_A 483 KGVKRKTLF---REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLV----------------------- 535 (699)
T ss_dssp SSCCEEEEC---CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EES-----------------------
T ss_pred CCCceEEEE---eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEE-----------------------
Confidence 754433333 222344578889987666655543 256777666432211 100
Q ss_pred cccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 165 FSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
...-.....|+++ +.++++-...+.|..+++..... ..+............ ++++. +.++
T Consensus 536 ----~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~----------~~~~~~~~~~~~P~g--lavd~-~~ly 598 (699)
T 1n7d_A 536 ----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDEKRLAHPFS--LAVFE-DKVF 598 (699)
T ss_dssp ----CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC----------EEECCCSSSCSSCCC--CEEET-TEEE
T ss_pred ----eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce----------EEEEecCCcCCCceE--eEEEC-CEEE
Confidence 0011224567776 34555556678999999865322 111111100011111 23333 3455
Q ss_pred EEEcCCCcEEEEEcCCCC
Q psy10348 242 AVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 242 ~~~~~dg~i~vwd~~~~~ 259 (291)
++....+.|..++..+++
T Consensus 599 wtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 599 WTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EECSTTTCEEEEETTTEE
T ss_pred EEeCCCCeEEEEEccCCC
Confidence 555677899999987664
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.10 E-value=0.0018 Score=50.13 Aligned_cols=201 Identities=6% Similarity=-0.088 Sum_probs=119.5
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 89 (291)
....+++|.+... .++.+-...+.|..++++.+... ..+...-.....+++.+.++.++++-...+.|.++++...
T Consensus 35 ~~~~~ld~d~~~~---~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHG---LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEEGGGT---EEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEeCCC---EEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 4566888888653 45556566788999998765422 2232223456788998746666677667789999998743
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
.....+ .........+++.|.+..|+.+.. .+.|...++..... ..+..
T Consensus 112 ~~~~l~---~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~------------------------- 162 (318)
T 3sov_A 112 LRKVLF---WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN------------------------- 162 (318)
T ss_dssp SCEEEE---CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEEC-------------------------
T ss_pred cEEEEE---eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEE-------------------------
Confidence 322222 234456789999997777766653 46777777653221 11100
Q ss_pred ccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 168 RDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 168 ~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
..-.....++++ ++ +.++-+..+.|..+|+..... +.+. .........+++ +. +.++.+-
T Consensus 163 --~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~----------~~~~--~~~~~~P~glav--~~-~~lywtd 225 (318)
T 3sov_A 163 --SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR----------QAVV--KGSLPHPFALTL--FE-DILYWTD 225 (318)
T ss_dssp --SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEE--CSCCSCEEEEEE--ET-TEEEEEE
T ss_pred --CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce----------EEEe--cCCCCCceEEEE--eC-CEEEEEe
Confidence 011234678887 34 444555678999999865322 1111 111122233333 32 4555666
Q ss_pred cCCCcEEEEEcCCCCC
Q psy10348 245 NQSGRTYVWDLDVQDP 260 (291)
Q Consensus 245 ~~dg~i~vwd~~~~~~ 260 (291)
...+.|..++..+++.
T Consensus 226 ~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 226 WSTHSILACNKYTGEG 241 (318)
T ss_dssp TTTTEEEEEETTTCCS
T ss_pred cCCCeEEEEECCCCCc
Confidence 6778899999877754
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.05 E-value=0.0015 Score=52.97 Aligned_cols=154 Identities=10% Similarity=0.060 Sum_probs=85.7
Q ss_pred eeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC---Ce-EEEEEC
Q psy10348 12 NFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD---HT-LRLWNI 86 (291)
Q Consensus 12 ~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~-i~vwd~ 86 (291)
....++|.|+ .. ..|+.+...+.|+.++..+++.... .........+++++ +++++++...+ .. +...+.
T Consensus 140 ~P~gvavd~~s~~---g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNY---DDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTT---CEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCC---CEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEEC
Confidence 3457888884 11 2455554448999999887765443 33445678999999 77755543321 12 333332
Q ss_pred CCcce-eeeeccccCCCCceEEEEEcc-CCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 87 KTDIC-IAIFGGVEGHRDEVLSADFDL-LGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
..+.. ...+ ........++++| ++.++++-..++.|+.+|..++.....+..
T Consensus 215 ~~~~~~~~~~----~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~---------------------- 268 (433)
T 4hw6_A 215 ASGFTERLSL----CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM---------------------- 268 (433)
T ss_dssp GGTTCCEEEE----EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE----------------------
T ss_pred CCCeeccccc----cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec----------------------
Confidence 22111 0112 1223446688899 565555555678899999876653211110
Q ss_pred cccccccCcceeEEEEc--CC-EEEEecCCCeEEEecCC
Q psy10348 165 FSTRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPG 200 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~ 200 (291)
.+....-..++++ ++ +.++-...+.|..++..
T Consensus 269 ----~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 269 ----MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp ----CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred ----cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 0001112357887 66 44555567899997764
No 282
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.93 E-value=0.0026 Score=48.79 Aligned_cols=188 Identities=9% Similarity=0.054 Sum_probs=95.2
Q ss_pred CEEEEecCC----CeEEEEccCCcceeEEEeeeccce-eEEEEecCCCcEEEEeecC------CeEEEEECCCcceeeee
Q psy10348 27 PLLAVAGSR----AVIRIFSPAFHACVRHFYGHGHAI-NELKFHPQDFNLLLSVSKD------HTLRLWNIKTDICIAIF 95 (291)
Q Consensus 27 ~~l~~~~~d----g~i~vw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~ 95 (291)
.+++.|+.+ ..+.+||+.+++-...-....... .+++.. ++.+++.|+.+ ..+.+||..+.+....
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~- 133 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK- 133 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-
Confidence 477777754 678889988765432211111111 122222 55777777765 4588999887654332
Q ss_pred ccccCCCCceEEEEEccCCCEEEEEec---------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 96 GGVEGHRDEVLSADFDLLGTKIMSCGM---------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
..+......-..+.+ ++..++.|+. -..+.+||+.+.+-...- + .+
T Consensus 134 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-------~-------------~p--- 188 (306)
T 3ii7_A 134 PSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-------P-------------MI--- 188 (306)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-------C-------------CS---
T ss_pred CCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-------C-------------cc---
Confidence 111222222222222 5666666654 244778888765422110 0 00
Q ss_pred cccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 167 TRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
.....-..+.+.+.+++.|+.+ ..+.+||+.+.+-.. +..+........ ....+ ++++
T Consensus 189 ---~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~~--~~i~ 251 (306)
T 3ii7_A 189 ---EARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM----------VSPMPWKGVTVK--CAAVG--SIVY 251 (306)
T ss_dssp ---SCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEE----------CCCCSCCBSCCE--EEEET--TEEE
T ss_pred ---chhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE----------CCCCCCCcccee--EEEEC--CEEE
Confidence 0111122333446667777654 457888887653211 111111111111 22233 7888
Q ss_pred EEEcCC-----CcEEEEEcCCCC
Q psy10348 242 AVGNQS-----GRTYVWDLDVQD 259 (291)
Q Consensus 242 ~~~~~d-----g~i~vwd~~~~~ 259 (291)
+.|+.+ ..+.+||+.+.+
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTTE
T ss_pred EEeCcCCCeeeeeEEEEcCCCCe
Confidence 888854 468899998864
No 283
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.88 E-value=0.0034 Score=48.06 Aligned_cols=188 Identities=12% Similarity=0.095 Sum_probs=93.9
Q ss_pred CEEEEecCC-----CeEEEEccCCcceeEEEeeec-cceeEEEEecCCCcEEEEeecCC-----eEEEEECCCcceeeee
Q psy10348 27 PLLAVAGSR-----AVIRIFSPAFHACVRHFYGHG-HAINELKFHPQDFNLLLSVSKDH-----TLRLWNIKTDICIAIF 95 (291)
Q Consensus 27 ~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~ 95 (291)
.+++.|+.+ ..+.+||..+.+-...-.... ..-.+++.. ++.+++.|+.++ .+.+||+.+.+....
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~- 139 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV- 139 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeec-
Confidence 477777754 358888887664322111111 111222222 557777777653 477889887654332
Q ss_pred ccccCCCCceEEEEEccCCCEEEEEecC-------CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 96 GGVEGHRDEVLSADFDLLGTKIMSCGMD-------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...- + .+
T Consensus 140 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-------~-------------~p----- 192 (302)
T 2xn4_A 140 APMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-------E-------------MS----- 192 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-------C-------------CS-----
T ss_pred CCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-------C-------------Cc-----
Confidence 111222222222222 56666666643 34778887665422110 0 00
Q ss_pred cccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 169 DIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 169 ~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
........+.+.+.+++.|+.+ ..+.+||+.+.+-.. +........... .... ++++++.
T Consensus 193 -~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~----------~~~~~~~r~~~~--~~~~--~~~i~v~ 257 (302)
T 2xn4_A 193 -TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ----------VADMNMCRRNAG--VCAV--NGLLYVV 257 (302)
T ss_dssp -SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE----------ECCCSSCCBSCE--EEEE--TTEEEEE
T ss_pred -cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee----------CCCCCCccccCe--EEEE--CCEEEEE
Confidence 0111122334456677777654 368888887653311 111111111111 1223 3788888
Q ss_pred EcCCC-----cEEEEEcCCCC
Q psy10348 244 GNQSG-----RTYVWDLDVQD 259 (291)
Q Consensus 244 ~~~dg-----~i~vwd~~~~~ 259 (291)
|+.++ .+.+||+.+.+
T Consensus 258 GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTTE
T ss_pred CCcCCCcccccEEEEcCCCCe
Confidence 87654 48999998763
No 284
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.87 E-value=0.0029 Score=48.38 Aligned_cols=188 Identities=8% Similarity=0.062 Sum_probs=95.3
Q ss_pred CEEEEecCC-----CeEEEEccCCcc---eeEEEeeec-cceeEEEEecCCCcEEEEeecC-----CeEEEEECCCccee
Q psy10348 27 PLLAVAGSR-----AVIRIFSPAFHA---CVRHFYGHG-HAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDICI 92 (291)
Q Consensus 27 ~~l~~~~~d-----g~i~vw~~~~~~---~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~ 92 (291)
.+++.|+.+ ..+.+||+.+++ -...-.... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+..
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 477777754 468899987765 222111111 111122222 55777777654 35888998876543
Q ss_pred eeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 93 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
..- .+......-..+.+ ++..++.|+.+ ..+.+||+.+.+-...- + .+
T Consensus 142 ~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-------~-------------~p---- 194 (301)
T 2vpj_A 142 MLG-DMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-------P-------------MA---- 194 (301)
T ss_dssp EEE-ECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-------C-------------CS----
T ss_pred ECC-CCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC-------C-------------CC----
Confidence 321 11222222222222 56677777654 35778887765422110 0 00
Q ss_pred ccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEE
Q psy10348 168 RDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILA 242 (291)
Q Consensus 168 ~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 242 (291)
........+.+.+.+++.|+.+ ..+.+||+.+.+-. .+.......... .....+ +++++
T Consensus 195 --~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~----------~~~~~p~~r~~~--~~~~~~--~~i~v 258 (301)
T 2vpj_A 195 --TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT----------TVTSMTTPRCYV--GATVLR--GRLYA 258 (301)
T ss_dssp --SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE----------EECCCSSCCBSC--EEEEET--TEEEE
T ss_pred --cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE----------ECCCCCCcccce--eEEEEC--CEEEE
Confidence 0111122334446677777664 46888998765331 111111111111 122333 77888
Q ss_pred EEcCC-----CcEEEEEcCCCC
Q psy10348 243 VGNQS-----GRTYVWDLDVQD 259 (291)
Q Consensus 243 ~~~~d-----g~i~vwd~~~~~ 259 (291)
.|+.+ ..+.+||+.+.+
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTE
T ss_pred EcCcCCCcccccEEEEcCCCCe
Confidence 88765 357889988764
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.82 E-value=0.0079 Score=48.16 Aligned_cols=184 Identities=8% Similarity=-0.088 Sum_probs=105.6
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc----ceeeeeccccCCCC
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD----ICIAIFGGVEGHRD 103 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~ 103 (291)
+|+.+. ...|+..++........+. ....+..|+|++.++.++.+-...+.|..+++... .....+ .....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~---~~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE---CSSCS
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE---eCCCC
Confidence 555544 4689999988665544443 44678899999855566666566788999998752 222222 23445
Q ss_pred ceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-
Q psy10348 104 EVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL- 181 (291)
Q Consensus 104 ~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 181 (291)
....+++.+.+..|+.+ ...+.|.+.++........+. ........++++
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~----------------------------~~~~~P~~iavdp 211 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR----------------------------ENGSKPRAIVVDP 211 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE----------------------------CSSCCEEEEEEET
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe----------------------------CCCCCcceEEEec
Confidence 67889998855555444 457788888886543221110 012235667776
Q ss_pred -CCEEEEec-C-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCC
Q psy10348 182 -GDFVLSKS-C-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDV 257 (291)
Q Consensus 182 -~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~ 257 (291)
+.+|+... . .+.|...++...... .+ ....-..... +++++++..|+.+ +..+.|..+|+..
T Consensus 212 ~~g~ly~td~~~~~~I~~~~~dG~~~~----------~~--~~~~l~~P~g--lavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 212 VHGFMYWTDWGTPAKIKKGGLNGVDIY----------SL--VTENIQWPNG--ITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp TTTEEEEEECSSSCCEEEEETTSCSCE----------EE--ECSSCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccCeEEEEeCCCCCEEEEEeCCCCccE----------EE--EECCCCceEE--EEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 34444433 2 367888877654321 11 1111122233 4555556666655 4567899999876
Q ss_pred C
Q psy10348 258 Q 258 (291)
Q Consensus 258 ~ 258 (291)
.
T Consensus 278 ~ 278 (400)
T 3p5b_L 278 G 278 (400)
T ss_dssp C
T ss_pred C
Confidence 4
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.80 E-value=0.0013 Score=57.26 Aligned_cols=72 Identities=15% Similarity=0.056 Sum_probs=48.2
Q ss_pred ceeEEEEe-cCCCcEEEEeec-CC----eEEEEECCCc-ceeeeeccccCCCCceEEEEEccCCCEEEEEecCC-----c
Q psy10348 58 AINELKFH-PQDFNLLLSVSK-DH----TLRLWNIKTD-ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-----S 125 (291)
Q Consensus 58 ~v~~~~~~-~~~~~~l~s~~~-dg----~i~vwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~ 125 (291)
.+...+|+ | |+++||-+.. +| .|+++|+.++ +.+.. .-......+.|+|+|+.|+....|. .
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----KVSGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----CEEEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----cccCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 57789999 9 8887775432 33 5999999988 53211 0111234688999999888777652 5
Q ss_pred EEEEeccCch
Q psy10348 126 LKLWDLTKPE 135 (291)
Q Consensus 126 i~v~d~~~~~ 135 (291)
|..+++.++.
T Consensus 249 v~~~~lgt~~ 258 (751)
T 2xe4_A 249 VWRHVMGKLQ 258 (751)
T ss_dssp EEEEETTSCG
T ss_pred EEEEECCCCc
Confidence 7777776654
No 287
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.78 E-value=0.008 Score=47.24 Aligned_cols=105 Identities=15% Similarity=0.076 Sum_probs=60.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcc-eeEEEe---eeccceeEEEEecC---CCcEEEEeec---C--
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHA-CVRHFY---GHGHAINELKFHPQ---DFNLLLSVSK---D-- 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~l~s~~~---d-- 78 (291)
.....++|.|++ .|+++..+|.|++++. +++ .+..+. ........|+++|+ ++.+.++-.. +
T Consensus 29 ~~P~~ia~~pdG-----~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 29 EVPWSIAPLGGG-----RYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp SCEEEEEEEETT-----EEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCeEEEEcCCC-----eEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 456789999998 4555566799999974 454 222111 11245789999993 3555554432 3
Q ss_pred --CeEEEEECCCc--c---eeeeecccc-CCCCceEEEEEccCCCEEEEEe
Q psy10348 79 --HTLRLWNIKTD--I---CIAIFGGVE-GHRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 79 --g~i~vwd~~~~--~---~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 121 (291)
..|..|+...+ . ....+..+. ........++|.|+|.+.++.+
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777876643 1 111111011 1112346789999998666644
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.75 E-value=0.0051 Score=47.30 Aligned_cols=175 Identities=9% Similarity=-0.029 Sum_probs=98.9
Q ss_pred eeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccC----C--CCceEEEEE---ccCCCEEEEEe---
Q psy10348 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG----H--RDEVLSADF---DLLGTKIMSCG--- 121 (291)
Q Consensus 54 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~--~~~i~~~~~---~~~~~~l~~~~--- 121 (291)
...-.-.+++|.+.++.++++.-..++|..||...+...... ... . ...+..+.| .|+++++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~--~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV--IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC--CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe--cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 334445678999855566666558999999999765433322 122 1 124689999 68877776543
Q ss_pred ----------cCCcEEEEecc---CchhhhhhccccccCCCCccccccCccccCcccccccc-cCcceeEEEEc--CCEE
Q psy10348 122 ----------MDHSLKLWDLT---KPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI-HRNYVDCVRWL--GDFV 185 (291)
Q Consensus 122 ----------~d~~i~v~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~l 185 (291)
.+..|..||+. +++.+....- ......+....+ -......++.+ |+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL----------------~~~~~~~~~~~g~~~~~~nDvavD~~GnaY 151 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNF----------------EKVQDEFEKKAGKRPFGVVQSAQDRDGNSY 151 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEES----------------HHHHHHHHHHHSSCCEEEEEEEECTTSCEE
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecC----------------ccccccccccccccccCCceeEECCCCCEE
Confidence 26779999998 6665432210 000000000000 11235667776 7777
Q ss_pred EEecCC-CeEEEecCCCCCccccccCCCceeeeeee--cCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 186 LSKSCE-NCIICWKPGRLEDKELRTNETNVTIINRL--NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 186 ~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
++++.. +.|...+......... .... .......+.+ ..+|++..|++....|.+..+|+..
T Consensus 152 Vt~s~~~~~I~rV~pdG~~~~~~---------~~~~~~~~~~~G~nGI--v~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 152 VAFALGMPAIARVSADGKTVSTF---------AWESGNGGQRPGYSGI--TFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEESSCEEEEECTTSCCEEEE---------EECCCCSSSCCSCSEE--EEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeCCCCCCeEEEEeCCCCEEeee---------eecCCCcccccCcceE--EEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 777766 7777766654321100 0000 1111112233 4457799888887799999999884
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.75 E-value=0.018 Score=50.30 Aligned_cols=184 Identities=8% Similarity=-0.093 Sum_probs=104.3
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc----ceeeeeccccCCCC
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD----ICIAIFGGVEGHRD 103 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~ 103 (291)
+|+.+. ...|+..++...+....+. ....+..|+|.+.++.++++-...+.|+.+++... .....+ .....
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi---~~~l~ 471 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQ 471 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE---CSSCS
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE---ecCCC
Confidence 444443 4568888887665444443 34567899999855666666666788999988742 222333 22345
Q ss_pred ceEEEEEccCCCEEEEE-ecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc-
Q psy10348 104 EVLSADFDLLGTKIMSC-GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL- 181 (291)
Q Consensus 104 ~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 181 (291)
....|++.+.++.|+.+ ...+.|.+.++...... .+.. ........|+++
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-~l~~---------------------------~~l~~P~gIaVDp 523 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFR---------------------------ENGSKPRAIVVDP 523 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-EEEE---------------------------CTTCCEEEEEEET
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-EEEe---------------------------CCCCCcceEEEec
Confidence 56788888877666555 45788999998754321 1110 012235677776
Q ss_pred -CCEEEEec-C-CCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCC
Q psy10348 182 -GDFVLSKS-C-ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDV 257 (291)
Q Consensus 182 -~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~ 257 (291)
..+|+... . .+.|...++...... ..+...-..... +++++.+..|+.+ ...+.|...++..
T Consensus 524 ~~g~LYwtD~g~~~~I~~~~~dG~~~~------------~lv~~~l~~P~G--LavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 524 VHGFMYWTDWGTPAKIKKGGLNGVDIY------------SLVTENIQWPNG--ITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCCEE------------EEECSSCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCEEEecCCCCCeEEEEecCCCceE------------EEEeCCCCCceE--EEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 34444443 2 367888887654321 111111122333 4444445655555 4567899999865
Q ss_pred C
Q psy10348 258 Q 258 (291)
Q Consensus 258 ~ 258 (291)
.
T Consensus 590 ~ 590 (791)
T 3m0c_C 590 G 590 (791)
T ss_dssp C
T ss_pred C
Confidence 4
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.74 E-value=0.0085 Score=46.31 Aligned_cols=185 Identities=13% Similarity=-0.005 Sum_probs=103.7
Q ss_pred EEEEecCCCeEEEEccCCcc-eeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee-eeeccccCCCCce
Q psy10348 28 LLAVAGSRAVIRIFSPAFHA-CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI-AIFGGVEGHRDEV 105 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~i 105 (291)
+|+.+. ...|+..+++... ....+........+++|.+.++.++.+-...+.|..+++..+... ..+ ...-...
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~---~~~l~~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV---VSGLLSP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE---EECCSCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE---cCCCCCc
Confidence 555544 4689999998653 122222223456789999855666677667788999998765322 122 1222345
Q ss_pred EEEEEccCCCEEE-EEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--C
Q psy10348 106 LSADFDLLGTKIM-SCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--G 182 (291)
Q Consensus 106 ~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 182 (291)
..+++.+.+..|+ +-...+.|.++++...... .+. .........++++ +
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~---------------------------~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLF---------------------------WQELDQPRAIALDPSS 133 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE---------------------------CSSCSSEEEEEEEGGG
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEE---------------------------eCCCCCccEEEEeCCC
Confidence 6788887555554 4445678999987653311 110 0012234567776 3
Q ss_pred CEEEEec--CCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE-cCCCcEEEEEcCCC
Q psy10348 183 DFVLSKS--CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG-NQSGRTYVWDLDVQ 258 (291)
Q Consensus 183 ~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~ 258 (291)
..|+... ..+.|...++..... ..+. ...-.. ...++++|++..|+.+ +..+.|..+|+...
T Consensus 134 g~ly~td~~~~~~I~r~~~dG~~~----------~~~~--~~~l~~--Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 134 GFMYWTDWGEVPKIERAGMDGSSR----------FIII--NSEIYW--PNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSC----------EEEE--CSSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEecCCCCEEEEEEcCCCCe----------EEEE--ECCCCC--ccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 4444443 357788887754322 1111 111111 2235555656655554 56788999998753
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.67 E-value=0.015 Score=47.13 Aligned_cols=116 Identities=9% Similarity=0.042 Sum_probs=68.1
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCC----CeEEEEccCCccee-EEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSR----AVIRIFSPAFHACV-RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~d----g~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 85 (291)
.....+++++++ .++++.... ..+...+...+... ..+. .-.....+++.|.++.++++-..++.|+.+|
T Consensus 182 ~~P~giavd~dG----~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d 256 (433)
T 4hw6_A 182 GQCADVNFTLNG----DMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYD 256 (433)
T ss_dssp SCEEEEEECTTC----CEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEEC
T ss_pred CCccEEEECCCC----CEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEE
Confidence 446788888887 455554321 12333333222111 1222 2344567889985666666666778899999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe-cCCcEEEEecc
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDLT 132 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~v~d~~ 132 (291)
..++.....+.. .+....-..++|+|++++|+.+. ..+.|+.++..
T Consensus 257 ~~~g~~~~~~~~-~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 257 PATGTLTEEEVM-MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TTTCCEEEEEEE-CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCeEEEEEec-cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 887765222211 12223335799999999665554 46789998865
No 292
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.67 E-value=0.027 Score=51.48 Aligned_cols=166 Identities=15% Similarity=0.079 Sum_probs=100.1
Q ss_pred eeeeeecceeEEEEeeeccCCCCCEEEEec----------CCCeEEEEccCCcceeEEE-eeeccceeEEEEecCCCcEE
Q psy10348 4 RYSLLIEENFYTCAWSMDLESGRPLLAVAG----------SRAVIRIFSPAFHACVRHF-YGHGHAINELKFHPQDFNLL 72 (291)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l 72 (291)
.+.+..++.+.|++...-......++++|. ..|.|++|++..+++.... ...+++|++++--. |.++
T Consensus 822 ~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~--g~Ll 899 (1158)
T 3ei3_A 822 AHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN--GKLL 899 (1158)
T ss_dssp EEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEET--TEEE
T ss_pred EEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeC--CEEE
Confidence 356667778887775442222346899886 3488999998744322211 13467888887663 4444
Q ss_pred EEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCcc
Q psy10348 73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARST 152 (291)
Q Consensus 73 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
++ - ..+|++|++...+.+..-. ..+. .|..+.....+++++.|..-..+.++..+... ..+.
T Consensus 900 a~-i-g~~l~vy~l~~~~~L~~~~--~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~--~~L~----------- 961 (1158)
T 3ei3_A 900 AS-I-NSTVRLYEWTTEKELRTEC--NHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPME--GNFE----------- 961 (1158)
T ss_dssp EE-E-TTEEEEEEECTTSCEEEEE--EECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTT--TEEE-----------
T ss_pred EE-c-CCEEEEEECCCCceEEEEe--eccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCC--CeEE-----------
Confidence 43 3 4789999998665444110 1111 12222332357789999887778776543321 0000
Q ss_pred ccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCC
Q psy10348 153 RPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGR 201 (291)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~ 201 (291)
.-..+.+...++++.+- .+.++.+..+|.+.+.....
T Consensus 962 ------------~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 962 ------------EIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ------------EEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred ------------EEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 00112356678888885 77888899999999987654
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.67 E-value=0.012 Score=45.75 Aligned_cols=220 Identities=7% Similarity=-0.032 Sum_probs=107.0
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEe---eeccceeEEEEecCCCcEEEEeecCCeEEEEEC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFY---GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 86 (291)
...+.++.|.+ . ..+++ +..|.|..- .+.|+.-..+. .+...+..+.+.+ ++..++.+ .+|.|.. ..
T Consensus 79 ~~~~~~i~~~~-~----~~~~~-g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~ 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-N----EGWIV-GEPPIMLHT-TDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIYR-TK 148 (327)
T ss_dssp CCEEEEEEEET-T----EEEEE-EETTEEEEE-SSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEEE-ES
T ss_pred CccEEEEEecC-C----eEEEE-ECCCeEEEE-CCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEEE-Ec
Confidence 34688898875 3 24444 556655442 22233222221 1234567788776 66666655 4554422 22
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEE-EeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL-WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
..|+.-.... ......+..+.+.+++.+++.+. +|.+.. .|- .+..-..+.
T Consensus 149 DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~------------------------ 200 (327)
T 2xbg_A 149 DSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHN------------------------ 200 (327)
T ss_dssp STTSSEEEEE--CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEE------------------------
T ss_pred CCCCCCEEee--cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECC------------------------
Confidence 2343333221 34556789999999887776654 454433 331 011100000
Q ss_pred ccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC----CcccEEEEEEEecCCCcE
Q psy10348 166 STRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF----KDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~ 240 (291)
......+..+.+. ...++..+.+|.+.+.+...++. -..... ....+. .+.+.+++.+
T Consensus 201 ---~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~t------------W~~~~~~~~~~~~~~~--~v~~~~~~~~ 263 (327)
T 2xbg_A 201 ---RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSEN------------WGELLSPLRRNSVGFL--DLAYRTPNEV 263 (327)
T ss_dssp ---CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEE------------ECCCBCTTSSCCSCEE--EEEESSSSCE
T ss_pred ---CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCe------------eEeccCCcccCCcceE--EEEecCCCEE
Confidence 0123446677776 33444555678877763221211 111110 111233 3445566777
Q ss_pred EEEEcCCCcEEEEEcCCCCCCcceeEEEe-ccccccceeeeEEccCCceee
Q psy10348 241 LAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 241 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~ 290 (291)
++++. +|.| ++....++.- ..+. .......+.++.|.++++.++
T Consensus 264 ~~~g~-~g~i-~~S~DgG~tW----~~~~~~~~~~~~~~~v~~~~~~~~~~ 308 (327)
T 2xbg_A 264 WLAGG-AGAL-LCSQDGGQTW----QQDVDVKKVPSNFYKILFFSPDQGFI 308 (327)
T ss_dssp EEEES-TTCE-EEESSTTSSC----EECGGGTTSSSCCCEEEEEETTEEEE
T ss_pred EEEeC-CCeE-EEeCCCCccc----EEcCccCCCCCCeEEEEEECCCceEE
Confidence 77665 6666 4455544321 1121 111234567788876666554
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.65 E-value=0.022 Score=48.52 Aligned_cols=199 Identities=7% Similarity=-0.156 Sum_probs=117.6
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
.....++|.+... .++++-..++.|..++++.......+.........|++.+..+++.++-...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~---~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDN---RIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCC---EEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 4567888888653 4555556678999998875443333332224577899987456666766667889999987443
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
....+ ...-.....+++.|....|+.+.. .+.|...++...... .+.
T Consensus 114 ~~~l~---~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~--------------------------- 162 (628)
T 4a0p_A 114 RQVLV---WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLV--------------------------- 162 (628)
T ss_dssp CEEEE---CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE---------------------------
T ss_pred EEEEE---eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEE---------------------------
Confidence 32222 233456789999997666666653 456666666543311 110
Q ss_pred cccCcceeEEEEc--CCEE-EEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEc
Q psy10348 169 DIHRNYVDCVRWL--GDFV-LSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245 (291)
Q Consensus 169 ~~~~~~v~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 245 (291)
..-.....|+++ ++.| ++-...+.|..+|+..... +.+... ...... ++.+. +.++++-.
T Consensus 163 -~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~----------~v~~~~---l~~P~g--lav~~-~~ly~tD~ 225 (628)
T 4a0p_A 163 -PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR----------EVIADD---LPHPFG--LTQYQ-DYIYWTDW 225 (628)
T ss_dssp -CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEEC---CSCEEE--EEEET-TEEEEEET
T ss_pred -CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce----------EEeecc---CCCceE--EEEEC-CEEEEecC
Confidence 012335677777 3444 4445578899999865432 112111 111223 33332 44445555
Q ss_pred CCCcEEEEEcCCCCC
Q psy10348 246 QSGRTYVWDLDVQDP 260 (291)
Q Consensus 246 ~dg~i~vwd~~~~~~ 260 (291)
..+.|...|..+++.
T Consensus 226 ~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 226 SRRSIERANKTSGQN 240 (628)
T ss_dssp TTTEEEEEETTTCCS
T ss_pred CCCEEEEEECCCCCc
Confidence 678899999877754
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.63 E-value=0.019 Score=47.06 Aligned_cols=113 Identities=7% Similarity=0.033 Sum_probs=68.2
Q ss_pred eeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCCcceeEEEeee---ccceeEEEE-------ecCCCcEEEEeecCC-
Q psy10348 12 NFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH---GHAINELKF-------HPQDFNLLLSVSKDH- 79 (291)
Q Consensus 12 ~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~l~s~~~dg- 79 (291)
....++|.|. .. .++++....+.|++.|++++.+...+..- ......++| ++ ++..|+.+...+
T Consensus 140 ~p~~la~dp~~~~---~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKD---HLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEE---EEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCT
T ss_pred CCCEEEEccCCCC---EEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCC
Confidence 3568899983 32 35555554578999998876655444321 124788999 99 777566555443
Q ss_pred ------eEEEEECCC-ccee-----eeeccccCCCCceEEEEEccCCCE-EEEEecCCcEEEEecc
Q psy10348 80 ------TLRLWNIKT-DICI-----AIFGGVEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLT 132 (291)
Q Consensus 80 ------~i~vwd~~~-~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~v~d~~ 132 (291)
.|.+.+... +... ..+. . -.....++.+|++.. +++-..++.|..+|+.
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~---~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIA---A-YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEE---E-ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CcccCceEEEEecCCCCceeecccceeec---c-CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 256665433 2221 1221 1 123356788995554 4455567889999987
No 296
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.61 E-value=0.0093 Score=51.17 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=49.0
Q ss_pred EEEEecCCCcEEEEeecCC-----------eEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CCcEEE
Q psy10348 61 ELKFHPQDFNLLLSVSKDH-----------TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKL 128 (291)
Q Consensus 61 ~~~~~~~~~~~l~s~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~v 128 (291)
..++.+.++++++.|+.+. .+.+||..+++..........+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 4566654677888877543 5889999887643221100223334445777889999999885 568999
Q ss_pred EeccCch
Q psy10348 129 WDLTKPE 135 (291)
Q Consensus 129 ~d~~~~~ 135 (291)
||..+.+
T Consensus 270 yd~~t~~ 276 (656)
T 1k3i_A 270 YDSSSDS 276 (656)
T ss_dssp EEGGGTE
T ss_pred ecCcCCc
Confidence 9987654
No 297
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.60 E-value=0.016 Score=45.50 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=59.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce--eEEEe---eeccceeEEEEecC---CCcEEEEeecC----
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC--VRHFY---GHGHAINELKFHPQ---DFNLLLSVSKD---- 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~l~s~~~d---- 78 (291)
..-..++|.|++ .+++ +..+|.|++++ +++. +..+. ........|+|+|+ ++.+.++-..+
T Consensus 31 ~~P~~ia~~pdG----~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDG----GMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTS----CEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcCCC----eEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 455789999998 3444 45669999998 3432 11111 11346789999993 24444444432
Q ss_pred -CeEEEEECCCcce---eeeecccc---CCCCceEEEEEccCCCEEEEEe
Q psy10348 79 -HTLRLWNIKTDIC---IAIFGGVE---GHRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 79 -g~i~vwd~~~~~~---~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~ 121 (291)
..|..++...+.. ...+..+. ........++|.|+|.+.++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 5788888764321 11111112 1112335899999997655543
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.57 E-value=0.016 Score=44.61 Aligned_cols=160 Identities=8% Similarity=0.069 Sum_probs=100.2
Q ss_pred EEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE-Eee----e--ccceeEEEE---ecCCCcEEEEee-------
Q psy10348 14 YTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYG----H--GHAINELKF---HPQDFNLLLSVS------- 76 (291)
Q Consensus 14 ~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~l~s~~------- 76 (291)
.+++|.+... .++++.-..++|..|+...+..... +.+ . ...+..|.| .| ++.++++..
T Consensus 16 E~~~wd~~~g---~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRTRQ---VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETTTT---EEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCT
T ss_pred cCccCcCCCC---EEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccc
Confidence 3678877542 3444444789999999976543332 211 0 113578999 58 677777543
Q ss_pred ------cCCeEEEEECC---CcceeeeeccccC-----------CCCceEEEEEccCCCEEEEEecC-CcEEEEeccCch
Q psy10348 77 ------KDHTLRLWNIK---TDICIAIFGGVEG-----------HRDEVLSADFDLLGTKIMSCGMD-HSLKLWDLTKPE 135 (291)
Q Consensus 77 ------~dg~i~vwd~~---~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~ 135 (291)
.+..|..+|+. +++.+.... +.. -......++..++|+..++++.. +.|..++.....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~d-L~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVN-FEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEE-SHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEec-CccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence 26779999999 777665431 111 11347899999999998988887 777777665432
Q ss_pred hhhhhccccccCCCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCC
Q psy10348 136 IKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGR 201 (291)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~ 201 (291)
...+.. .+ | ........+.++++ ++.|++....+.|..+|+..
T Consensus 171 -~~~~~~--~~-~-------------------~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 -VSTFAW--ES-G-------------------NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -EEEEEE--CC-C-------------------CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred -Eeeeee--cC-C-------------------CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 111110 00 0 00122336678887 66777766699999999874
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.56 E-value=0.029 Score=47.66 Aligned_cols=202 Identities=6% Similarity=-0.084 Sum_probs=110.4
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce-eEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC-VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 88 (291)
-+....++|++... .++.+-...+.|..++++.... ...+...-.....|++.+.+++++++-...+.|.+.++..
T Consensus 39 ~~~~~~ld~~~~~~---~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 39 LEDAAAVDFVFSHG---LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CSCEEEEEEETTTT---EEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCC---EEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 34567888888653 3444445567888888865432 2223322256788999985556666666778999999874
Q ss_pred cceeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
......+ ...-.....+++.|.+.+|+.+.. .+.|...++..... ..+..
T Consensus 116 ~~~~~l~---~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~------------------------ 167 (619)
T 3s94_A 116 SLRKVLF---WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN------------------------ 167 (619)
T ss_dssp CSCEEEE---CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC------------------------
T ss_pred CCEEEEE---eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEe------------------------
Confidence 4332222 233445678999998766666653 34565555543221 11100
Q ss_pred cccccCcceeEEEEc--CC-EEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 167 TRDIHRNYVDCVRWL--GD-FVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
..-.....++++ ++ +.++-...+.|..+|+.......+ +.....+.. .++... +..+.+
T Consensus 168 ---~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~---------~~~~~~~P~-----gi~~~~-~~ly~t 229 (619)
T 3s94_A 168 ---SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV---------VKGSLPHPF-----ALTLFE-DILYWT 229 (619)
T ss_dssp ---SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------CC-----CEEESS-SEEEEE
T ss_pred ---CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE---------EeCCCCCce-----EEEEeC-CEEEEe
Confidence 012235677776 34 444445567888888865432110 110001111 234443 244444
Q ss_pred EcCCCcEEEEEcCCCCC
Q psy10348 244 GNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~~~ 260 (291)
-...+.|...|..+++.
T Consensus 230 d~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 230 DWSTHSILACNKYTGEG 246 (619)
T ss_dssp CTTTCSEEEEESSSCCC
T ss_pred cCCCCEEEEEECCCCcc
Confidence 45678899999887753
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.54 E-value=0.016 Score=44.21 Aligned_cols=187 Identities=12% Similarity=0.066 Sum_probs=93.9
Q ss_pred CEEEEec-CC-----CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC-----CeEEEEECCCcc---
Q psy10348 27 PLLAVAG-SR-----AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDI--- 90 (291)
Q Consensus 27 ~~l~~~~-~d-----g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~--- 90 (291)
.+++.|+ .+ ..+.+||+.+++-.. .+.. ...-.+++. . ++.+++.|+.+ ..+.+||+.+++
T Consensus 16 ~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 16 VLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR-KRRYVASVS-L-HDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS-CCBSCEEEE-E-TTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred EEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh-hhccccEEE-E-CCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 4777777 33 478899987765322 1111 111122222 2 55777777765 358899988766
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCC-----cEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-----SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
.... ..+......-..+.+ ++..++.|+.++ .+.+||+.+.+-...-. .|
T Consensus 93 W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----~p----------------- 147 (301)
T 2vpj_A 93 WYSV-APMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD-----MQ----------------- 147 (301)
T ss_dssp CEEE-CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE-----CS-----------------
T ss_pred eEEC-CCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCC-----CC-----------------
Confidence 3322 211222222222333 566677776543 47778876654221100 00
Q ss_pred ccccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348 166 STRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (291)
.....-.++.+.+.+++.|+.+ ..+.+||+.+..-. .+..+........ .... ++++
T Consensus 148 ----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~----------~~~~~p~~r~~~~--~~~~--~~~i 209 (301)
T 2vpj_A 148 ----TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT----------NVTPMATKRSGAG--VALL--NDHI 209 (301)
T ss_dssp ----SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE----------EECCCSSCCBSCE--EEEE--TTEE
T ss_pred ----CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE----------eCCCCCcccccce--EEEE--CCEE
Confidence 0111122333446666777654 45788887765321 1111111111111 1223 3778
Q ss_pred EEEEcCC-----CcEEEEEcCCCC
Q psy10348 241 LAVGNQS-----GRTYVWDLDVQD 259 (291)
Q Consensus 241 l~~~~~d-----g~i~vwd~~~~~ 259 (291)
++.|+.+ ..+.+||+.+.+
T Consensus 210 ~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 210 YVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEeCCCCCcccceEEEEeCCCCc
Confidence 8888764 468999998763
No 301
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.49 E-value=0.01 Score=45.53 Aligned_cols=187 Identities=11% Similarity=0.052 Sum_probs=92.8
Q ss_pred CEEEEecC----C-----CeEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeecC-----CeEEEEECCCcc
Q psy10348 27 PLLAVAGS----R-----AVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKD-----HTLRLWNIKTDI 90 (291)
Q Consensus 27 ~~l~~~~~----d-----g~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~ 90 (291)
.+++.|+. + ..+.+||+.+.+-... +... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 47777765 2 4688888876643221 1111 111122222 55777777643 358889988765
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
.... ..+......-..+.+ ++..++.|+.+ ..+.+||+.+.+-...- + .+
T Consensus 149 W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-------~-------------~p-- 203 (308)
T 1zgk_A 149 WHLV-APMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT-------A-------------MN-- 203 (308)
T ss_dssp EEEC-CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC-------C-------------CS--
T ss_pred EeEC-CCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC-------C-------------CC--
Confidence 4332 111222222222333 56677777654 35778887665421100 0 00
Q ss_pred ccccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcE
Q psy10348 166 STRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (291)
........+.+.+.+++.|+.+ ..+.+||+.+..-.. +..+........ ....+ +++
T Consensus 204 ----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~~--~~i 265 (308)
T 1zgk_A 204 ----TIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTF----------VAPMKHRRSALG--ITVHQ--GRI 265 (308)
T ss_dssp ----SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE----------CCCCSSCCBSCE--EEEET--TEE
T ss_pred ----CccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEE----------CCCCCCCccceE--EEEEC--CEE
Confidence 0111122334456677777654 468889887653211 111111111111 12223 778
Q ss_pred EEEEcCC-----CcEEEEEcCCCC
Q psy10348 241 LAVGNQS-----GRTYVWDLDVQD 259 (291)
Q Consensus 241 l~~~~~d-----g~i~vwd~~~~~ 259 (291)
++.|+.+ ..+.+||+.+.+
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEcCcCCCcccceEEEEcCCCCE
Confidence 8888754 357888888763
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.47 E-value=0.0012 Score=57.02 Aligned_cols=97 Identities=7% Similarity=-0.015 Sum_probs=56.9
Q ss_pred CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCC----cceeeeeccccCCCCceEEEEE
Q psy10348 35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT----DICIAIFGGVEGHRDEVLSADF 110 (291)
Q Consensus 35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~i~~~~~ 110 (291)
.+.|+..++.+.+....+.. ...+..|+|.+.++.++++-...+.|+.+++.. ......+ .........+++
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i---~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---SRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC---CSCC--CCCEEC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE---eCCCCCcceEEE
Confidence 35788888876655443332 345678999984445555545668899999875 1222222 112233456788
Q ss_pred ccCCCEEE-EEecCCcEEEEeccCch
Q psy10348 111 DLLGTKIM-SCGMDHSLKLWDLTKPE 135 (291)
Q Consensus 111 ~~~~~~l~-~~~~d~~i~v~d~~~~~ 135 (291)
.+.+..|+ +-...+.|.++++....
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCc
Confidence 76554444 44457889999876543
No 303
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.03 Score=45.28 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=71.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecC-CC----eEEEEccCCccee--EEEeeeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGS-RA----VIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~-dg----~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
.....++|++++ ++|+++.. ++ .+.+.+. .+... ..+.. ......++++|.++.++++-..++.|..
T Consensus 179 ~~P~~ia~d~~G----~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~ 252 (430)
T 3tc9_A 179 SKVRTICWTHEA----DSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFR 252 (430)
T ss_dssp SCEEEEEECTTS----SEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred CCcceEEEeCCC----CEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEE
Confidence 446778888887 44555543 22 3333443 33322 23332 3446788999966666666667789999
Q ss_pred EECCCcceeeeeccccCCCCceEEEEEccCCCEEEEE-ecCCcEEEEeccC
Q psy10348 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC-GMDHSLKLWDLTK 133 (291)
Q Consensus 84 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~v~d~~~ 133 (291)
++...+....... .........++|+|++++|+.+ ...+.|..++...
T Consensus 253 ~~~~~~~~~~~~~--~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 253 YDFTTQETTPLFT--IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EETTTTEEEEEEE--CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EECCCCcEEEEEE--cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 9988655422221 1223456889999999955555 4578899988764
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.46 E-value=0.065 Score=49.06 Aligned_cols=178 Identities=10% Similarity=0.083 Sum_probs=101.4
Q ss_pred eEEEEccCCcceeEEEe-eeccceeEEE---EecCCCcEEEEee----------cCCeEEEEECCCcceeeeeccccCCC
Q psy10348 37 VIRIFSPAFHACVRHFY-GHGHAINELK---FHPQDFNLLLSVS----------KDHTLRLWNIKTDICIAIFGGVEGHR 102 (291)
Q Consensus 37 ~i~vw~~~~~~~~~~~~-~~~~~v~~~~---~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~ 102 (291)
.|++.|..+.+.+..++ .....+.+++ |......+|+.|. ..|.|.++++..++ +..+.. ...+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~-~~v~ 885 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAE-KEVK 885 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEE-EEES
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEE-EEcC
Confidence 47777777777665554 1223445544 3332346888875 35889999987443 333321 3456
Q ss_pred CceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccccCc-ceeEEEEc
Q psy10348 103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRN-YVDCVRWL 181 (291)
Q Consensus 103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~ 181 (291)
++|++++-- +| +|++|- ...+++|++...+.+. ... ..+.. .+..+...
T Consensus 886 g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~-~~~--------------------------~~~~~i~~~~l~~~ 935 (1158)
T 3ei3_A 886 GAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELR-TEC--------------------------NHYNNIMALYLKTK 935 (1158)
T ss_dssp SCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEE-EEE--------------------------EECCCSCEEEEEEE
T ss_pred CcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEE-EEe--------------------------eccccEEEEEEecc
Confidence 788888744 35 455444 4789999997654322 100 00111 12344445
Q ss_pred CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 258 (291)
+++++.|..-..+.+...+.... .+..+.....+.+..+..+-. ...++.+..+|.+.+......
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~~-----------~L~~~a~D~~~~~vta~~~ld-~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPMEG-----------NFEEIARDFNPNWMSAVEILD-DDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTTT-----------EEEEEEECCSCBCEEEEEEEE-TTEEEEEETTSEEEEEEECTT
T ss_pred CCEEEEEEhhheEEEEEEEcCCC-----------eEEEEEeecccccEEEEEEEc-cCcEEEEcCCCcEEEEecCCC
Confidence 88999998877777765433221 133333233333333333311 457888999999999987653
No 305
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.42 E-value=0.02 Score=43.90 Aligned_cols=187 Identities=14% Similarity=0.085 Sum_probs=92.9
Q ss_pred CEEEEecCC----CeEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeec----C-----CeEEEEECCCcce
Q psy10348 27 PLLAVAGSR----AVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSK----D-----HTLRLWNIKTDIC 91 (291)
Q Consensus 27 ~~l~~~~~d----g~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~----d-----g~i~vwd~~~~~~ 91 (291)
.+++.|+.+ ..+.+||..+++-... +.. ...-.+++.. ++.+++.|+. + ..+.+||+.+.+.
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQV-PRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCc-ccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 577777742 4688999877653221 111 0111122222 5577777765 2 3588899887654
Q ss_pred eeeeccccCCCCceEEEEEccCCCEEEEEecC-----CcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD-----HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 92 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
... ..+......-..+.+ ++..++.|+.+ ..+.+||+.+.+-...-. .+
T Consensus 103 ~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--------------------~p--- 156 (308)
T 1zgk_A 103 SPC-APMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP--------------------ML--- 156 (308)
T ss_dssp EEC-CCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCC--------------------CS---
T ss_pred eEC-CCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC--------------------CC---
Confidence 332 111222222222333 56667776643 357778876654211100 00
Q ss_pred cccccCcceeEEEEcCCEEEEecCC-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 167 TRDIHRNYVDCVRWLGDFVLSKSCE-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
.....-..+.+.+.+++.|+.+ ..+.+||+.+..-.. +..+........ .... +++++
T Consensus 157 ---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~--~~~iy 219 (308)
T 1zgk_A 157 ---TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM----------ITAMNTIRSGAG--VCVL--HNCIY 219 (308)
T ss_dssp ---SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE----------CCCCSSCCBSCE--EEEE--TTEEE
T ss_pred ---ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEee----------CCCCCCccccce--EEEE--CCEEE
Confidence 0111112333446666766654 457888876653211 111111111111 1222 37788
Q ss_pred EEEcCC-----CcEEEEEcCCCC
Q psy10348 242 AVGNQS-----GRTYVWDLDVQD 259 (291)
Q Consensus 242 ~~~~~d-----g~i~vwd~~~~~ 259 (291)
+.|+.+ ..+.+||+.+.+
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTTE
T ss_pred EEeCCCCCCccceEEEEeCCCCc
Confidence 888764 468999988753
No 306
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.35 E-value=0.014 Score=44.91 Aligned_cols=103 Identities=8% Similarity=-0.035 Sum_probs=52.5
Q ss_pred CEEEEecC----C-------CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC--------CeEEEEE
Q psy10348 27 PLLAVAGS----R-------AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD--------HTLRLWN 85 (291)
Q Consensus 27 ~~l~~~~~----d-------g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d--------g~i~vwd 85 (291)
.+++.|+. + ..+.+||..+++-.. .+.. ...-.+++.. ++.+++.|+.+ ..+.+||
T Consensus 47 ~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 47 QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS-PRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS-CEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred EEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc-chhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEEC
Confidence 57777773 1 237788887765321 1110 0111122222 45777777642 3588999
Q ss_pred CCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-C-----CcEEEEeccCch
Q psy10348 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-D-----HSLKLWDLTKPE 135 (291)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-----~~i~v~d~~~~~ 135 (291)
..+++.... ..+......-..+. -+++.++.|+. + ..+.+||+.+.+
T Consensus 124 ~~~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 124 RLSFKWGES-DPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTTTEEEEC-CCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCCCcEeEC-CCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 987654322 11122222222222 35666777765 2 357888877654
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.34 E-value=0.031 Score=42.75 Aligned_cols=103 Identities=16% Similarity=0.144 Sum_probs=56.3
Q ss_pred CEEEEecC--CCeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecC----CeEEEEECCCcceeeeeccc
Q psy10348 27 PLLAVAGS--RAVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKD----HTLRLWNIKTDICIAIFGGV 98 (291)
Q Consensus 27 ~~l~~~~~--dg~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~ 98 (291)
.+++.|+. ...+.+||..+++-.. .+...... .+++. - ++.+++.|+.+ ..+.+||+.+++.... ..+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVF-W-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK-LGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEE-E-TTEEEEECCBSSSBCCEEEEEETTTTEEEEE-ECC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEE-E-CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC-CCC
Confidence 36666665 3578899988765322 11111111 12222 2 55777887755 5688999987754332 111
Q ss_pred cCCCCceEEEEEccCCCEEEEEecC------CcEEEEeccCch
Q psy10348 99 EGHRDEVLSADFDLLGTKIMSCGMD------HSLKLWDLTKPE 135 (291)
Q Consensus 99 ~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~ 135 (291)
......-..+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 89 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 89 PTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 222222222222 56677777765 457888877654
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.33 E-value=0.031 Score=42.64 Aligned_cols=187 Identities=12% Similarity=0.128 Sum_probs=92.7
Q ss_pred CEEEEecCC----CeEEEEccCCcceeEEEeee-cc-ceeEEEEecCCCcEEEEeecCC-----eEEEEECCCcceeeee
Q psy10348 27 PLLAVAGSR----AVIRIFSPAFHACVRHFYGH-GH-AINELKFHPQDFNLLLSVSKDH-----TLRLWNIKTDICIAIF 95 (291)
Q Consensus 27 ~~l~~~~~d----g~i~vw~~~~~~~~~~~~~~-~~-~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~ 95 (291)
.+++.|+.+ ..+..||+.+.+-.. +... .. .-.+++.. ++.+++.|+.++ .+.+||..+.+....
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~- 92 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV- 92 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC-
Confidence 367777654 468889988765322 2111 11 11122222 557777777553 588899887654332
Q ss_pred ccccCCCCceEEEEEccCCCEEEEEecCC-----cEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 96 GGVEGHRDEVLSADFDLLGTKIMSCGMDH-----SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
..+......-..+.+ ++..++.|+.++ .+.+||+.+.+-...- + .+ .
T Consensus 93 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-------~-------------~p------~ 144 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-------P-------------MN------T 144 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-------C-------------CS------S
T ss_pred CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-------C-------------CC------C
Confidence 111222222222322 566777777654 4667777654421110 0 00 0
Q ss_pred cCcceeEEEEcCCEEEEecCC-------CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEE
Q psy10348 171 HRNYVDCVRWLGDFVLSKSCE-------NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 171 ~~~~v~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 243 (291)
.......+.+.+.+++.|+.+ ..+.+||+.+..-. .+..+........ ....+ +++++.
T Consensus 145 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~----------~~~~~p~~r~~~~--~~~~~--~~iyv~ 210 (302)
T 2xn4_A 145 RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT----------YIAEMSTRRSGAG--VGVLN--NLLYAV 210 (302)
T ss_dssp CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE----------EECCCSSCCBSCE--EEEET--TEEEEE
T ss_pred cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE----------ECCCCcccccccc--EEEEC--CEEEEE
Confidence 111122333446666666643 35788888765321 1111111111111 12233 788888
Q ss_pred EcCC-----CcEEEEEcCCCC
Q psy10348 244 GNQS-----GRTYVWDLDVQD 259 (291)
Q Consensus 244 ~~~d-----g~i~vwd~~~~~ 259 (291)
|+.+ ..+.+||+.+.+
T Consensus 211 GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTTE
T ss_pred CCCCCCcccceEEEEeCCCCC
Confidence 8764 368899988753
No 309
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.02 Score=44.48 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=73.5
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeeec-cceeEEEEe--cCCCcEEEEe-ecCCeEEEEECCCcceeeeecccc-CCC
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHG-HAINELKFH--PQDFNLLLSV-SKDHTLRLWNIKTDICIAIFGGVE-GHR 102 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~--~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~-~~~ 102 (291)
++++++.||.|.-.|.++|+.+.+++... .++....-. +.++..++.. ..||.|..++..+|.....+..-. -..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 89999999999999999999998887431 222221100 1123444443 689999999998886554432100 011
Q ss_pred CceEE---EEE-----ccCCCEEEEEecCCcEEEEeccCchhhhhhcc
Q psy10348 103 DEVLS---ADF-----DLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE 142 (291)
Q Consensus 103 ~~i~~---~~~-----~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 142 (291)
.++.. ... ...+..+++|+.+|.+...|+++|+.+..+..
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 22221 000 01456889999999999999999998877653
No 310
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.28 E-value=0.029 Score=43.23 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=51.4
Q ss_pred CEEEEecC----CC-------eEEEEccCCcceeEE--EeeeccceeEEEEecCCCcEEEEeecC-------CeEEEEEC
Q psy10348 27 PLLAVAGS----RA-------VIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKD-------HTLRLWNI 86 (291)
Q Consensus 27 ~~l~~~~~----dg-------~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-------g~i~vwd~ 86 (291)
.+++.|+. ++ .+.+||..+++-... +.. ...-.+++.. ++.+++.|+.+ ..+.+||.
T Consensus 58 ~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 58 QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS-ARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp CEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS-CBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc-cccccceEEE--CCEEEEEcCccCCCCcccceEEEEeC
Confidence 57777773 12 277788776543221 111 1111222222 45777777754 24788898
Q ss_pred CCcceeeeeccccCCCCceEEEEEccCCCEEEEEec------CCcEEEEeccCch
Q psy10348 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM------DHSLKLWDLTKPE 135 (291)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~ 135 (291)
.+.+....- .+......-..+. .++..++.|+. -..+.+||+.+.+
T Consensus 135 ~~~~W~~~~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 135 VAAKWSEVK-NLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTTEEEEEC-CCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCCCEeECC-CCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 876544321 1111111112222 35666666664 2358888887654
No 311
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.24 E-value=0.029 Score=46.01 Aligned_cols=66 Identities=12% Similarity=0.097 Sum_probs=42.9
Q ss_pred eeEEEEecC-CCcEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEE-------ccCCCEEEEEecCC
Q psy10348 59 INELKFHPQ-DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADF-------DLLGTKIMSCGMDH 124 (291)
Q Consensus 59 v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~d~ 124 (291)
...|+|.|. .++++++-...+.|++.|++++........-.........++| ++++.+|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 357899983 4455555554567999998876655444210112346899999 99999777776544
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.18 E-value=0.052 Score=42.07 Aligned_cols=107 Identities=7% Similarity=-0.066 Sum_probs=60.6
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEE-EEccCCcceeEEE-eeeccceeEEEEecCCCcEEEEeecCCeEE-EEECC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIR-IFSPAFHACVRHF-YGHGHAINELKFHPQDFNLLLSVSKDHTLR-LWNIK 87 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~-vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~-vwd~~ 87 (291)
..+..+.+.+++ ..++++ .+|.|. -.| .|+.-..+ ......+..+.+.+ ++.+++.+. +|.+. -+|-
T Consensus 122 ~~~~~i~~~~~~----~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~- 191 (327)
T 2xbg_A 122 GSPRLIKALGNG----SAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEP- 191 (327)
T ss_dssp SCEEEEEEEETT----EEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECT-TSCEEEEET-TSSEEEEECT-
T ss_pred CCeEEEEEECCC----CEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCC-
Confidence 346777777665 355555 455443 223 23322222 23456788999998 777777664 44443 3332
Q ss_pred CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEe
Q psy10348 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130 (291)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d 130 (291)
.+..-..+. ......+..+.+.+++..+ .++.+|.+++.+
T Consensus 192 gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 192 GQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSD 231 (327)
T ss_dssp TCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEE
T ss_pred CCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEec
Confidence 122222221 2455678899999988655 455578777764
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.18 E-value=0.061 Score=42.88 Aligned_cols=121 Identities=10% Similarity=0.040 Sum_probs=71.4
Q ss_pred CCcEEEEeecCCeEEEEECCCcceeeeeccccC--CCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccc
Q psy10348 68 DFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG--HRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145 (291)
Q Consensus 68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 145 (291)
++..++.+- ++.||.-++..+...+.+.. .. .-..|..+..+|+|.+|+..+ +..|.|..+..+.....-. ..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~-~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~-~~- 105 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNF-SRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV-SI- 105 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEEC-TTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH-HH-
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEec-CcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc-cc-
Confidence 455555543 46788878775444444421 11 123678899999999999887 5689999987432111000 00
Q ss_pred cCCCCccccccCccccCcccccc-cccCcceeEEEEc-----CCEEEEecCCCeEEEecCCCC
Q psy10348 146 FNPARSTRPFDTQKEHFPQFSTR-DIHRNYVDCVRWL-----GDFVLSKSCENCIICWKPGRL 202 (291)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~-----~~~l~~~~~d~~i~iwd~~~~ 202 (291)
. ...+...-.+... .....+|..+.|+ +..|++-..|+.|++||+...
T Consensus 106 ------~---~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 106 ------Q---DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp ------H---HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred ------c---cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 0 0000000000000 1146789999998 558899999999999999863
No 314
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.10 E-value=0.029 Score=43.56 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=80.2
Q ss_pred ceeEEEEe--eeccCCCCCEEEEecCCCeEEEEccC-------CcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeE
Q psy10348 11 ENFYTCAW--SMDLESGRPLLAVAGSRAVIRIFSPA-------FHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81 (291)
Q Consensus 11 ~~i~~~~~--s~~~~~~~~~l~~~~~dg~i~vw~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 81 (291)
..++.+++ +|.. +..++++...+|.+..|++. +.+.++++.. .+.+..+...+ ....|+.+-++.-|
T Consensus 128 ~~pyGlcly~~~~~--g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd-~~g~Lyv~eEd~GI 203 (355)
T 3amr_A 128 NEVYGFTLYHSQKT--GKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD-EYGRLYIAEEDEAI 203 (355)
T ss_dssp SSCCCEEEEECTTT--CCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET-TTTEEEEEETTTEE
T ss_pred CCeeEEEEEecCCC--CcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC-CCCeEEEecccceE
Confidence 55666777 4432 11368888889999999882 3456677764 45788899998 77888888888666
Q ss_pred EEEECC-----CcceeeeeccccCCCCceEEEEE--ccCCC-EEEEEe-cCCcEEEEecc-Cchh
Q psy10348 82 RLWNIK-----TDICIAIFGGVEGHRDEVLSADF--DLLGT-KIMSCG-MDHSLKLWDLT-KPEI 136 (291)
Q Consensus 82 ~vwd~~-----~~~~~~~~~~~~~~~~~i~~~~~--~~~~~-~l~~~~-~d~~i~v~d~~-~~~~ 136 (291)
..++.+ +++.+..+. .......+..|++ .++++ +|++++ .+.++.+||.+ +.+.
T Consensus 204 w~~da~p~~~~~~~~v~~~~-~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRAD-GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBS-SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred EEEeCCcCCCCCceEEEEec-CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence 666754 234444431 1222346888887 45556 677666 47899999986 4443
No 315
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.07 E-value=0.064 Score=41.17 Aligned_cols=203 Identities=9% Similarity=0.119 Sum_probs=115.7
Q ss_pred EeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-ceeeee
Q psy10348 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAIF 95 (291)
Q Consensus 17 ~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~ 95 (291)
..+|.. +.+|.-. ..++.|+|+++.+.++.+.- .+.|.-=.|-. + +.|+-.+ +..|+-|++... .+.+.+
T Consensus 73 IMnP~~----~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis-~-~~L~lVT-~taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 73 IMNPAS----KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-L-NTVALVT-DNAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EECSSS----SEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECS-S-SEEEEEE-SSEEEEEESSTTCCCEEEE
T ss_pred eeCCCc----cEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecC-C-CeEEEEc-CCcEEEEcccCCCCCceee
Confidence 346665 5777765 57899999999988887764 45677777764 3 4555554 457999999743 455555
Q ss_pred ccccC-CCCceEEEEEccCCCEEEEEec-------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 96 GGVEG-HRDEVLSADFDLLGTKIMSCGM-------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 96 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
..... ....|..-..+++.++++..+- .|.+.+|..+..... .
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-----------------------------~ 194 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-----------------------------P 194 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-----------------------------E
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc-----------------------------e
Confidence 31111 1356777777888887665442 466777776654311 1
Q ss_pred ccccCcceeEEEEcCC-----EEEEec---CCCeEEEecCCCCCccccccCCCceeeeeeecCC-cccEEEEEEEecCCC
Q psy10348 168 RDIHRNYVDCVRWLGD-----FVLSKS---CENCIICWKPGRLEDKELRTNETNVTIINRLNFK-DCEIWFIRFSMDYWQ 238 (291)
Q Consensus 168 ~~~~~~~v~~~~~~~~-----~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 238 (291)
.++|.+.-..+...|+ +++.+. ..+.+++-++....... .+. ..+.+.-+-.. ...-.-+++..++.-
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~-~~f--~kk~vdi~fppea~~DFPVamqvs~ky 271 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPF--PKKAVDVFFPPEAQNDFPVAMQISEKH 271 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC-CCC--CCEEEEECCCTTCTTCCEEEEEEETTT
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC-CCc--ccccceeeCCccccCCceEEEEecccC
Confidence 1233332222222211 222211 23689999985541100 000 00111111111 111122345555667
Q ss_pred cEEEEEcCCCcEEEEEcCCCCC
Q psy10348 239 KILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 239 ~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
..++.-+.-|.|.+||++++.+
T Consensus 272 gviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 272 DVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp TEEEEEETTSEEEEEETTTCCE
T ss_pred CEEEEEeCCcEEEEEEcccCcE
Confidence 8899999999999999999964
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.06 E-value=0.08 Score=42.23 Aligned_cols=149 Identities=13% Similarity=0.158 Sum_probs=89.7
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeee----ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcce------------
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGH----GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC------------ 91 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~------------ 91 (291)
.++.+- ++.||.-++..+...+.+... -..|..+..+| +|++||..+ +..|.|-.+..+..
T Consensus 34 ~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q 110 (452)
T 3pbp_A 34 RIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQ 110 (452)
T ss_dssp EEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTE
T ss_pred EEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccccc
Confidence 344432 367887777644445555532 12678899999 999999976 46788888773321
Q ss_pred eeeec--ccc-CCCCceEEEEEccC---CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccc
Q psy10348 92 IAIFG--GVE-GHRDEVLSADFDLL---GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQF 165 (291)
Q Consensus 92 ~~~~~--~~~-~~~~~i~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
.+.+. ... ....+|..+.|+|- +..|++-..|+.|++||+........ .++ .....+
T Consensus 111 ~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-----~L~------------k~~~~f 173 (452)
T 3pbp_A 111 IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-----VLN------------KPNNSF 173 (452)
T ss_dssp EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-----EES------------CCCSEE
T ss_pred eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-----chh------------cccccc
Confidence 11221 001 13578999999995 55899999999999999987321111 000 000011
Q ss_pred ccccccCcceeEEEEcCC----EEEEecCCCeEEEe
Q psy10348 166 STRDIHRNYVDCVRWLGD----FVLSKSCENCIICW 197 (291)
Q Consensus 166 ~~~~~~~~~v~~~~~~~~----~l~~~~~d~~i~iw 197 (291)
..+.....|.+++|.++ |+++.+.+|-|.-.
T Consensus 174 -g~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 174 -GLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp -ESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred -CCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 11224466888999722 44445677877653
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.73 E-value=0.16 Score=40.68 Aligned_cols=204 Identities=9% Similarity=0.120 Sum_probs=117.7
Q ss_pred EEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-ceeee
Q psy10348 16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAI 94 (291)
Q Consensus 16 ~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~ 94 (291)
...+|.. +.+|.=. ..++.|+|+++.+.++.+.- ...|.-=.|-. + +.|+-.+ +..|+-|++... .+.+.
T Consensus 71 AIMnP~~----~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis-~-~~l~lVT-~taVyHWsi~~~s~P~kv 141 (494)
T 1bpo_A 71 AIMNPAS----KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-L-NTVALVT-DNAVYHWSMEGESQPVKM 141 (494)
T ss_dssp EEECSSS----SCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEE-T-TEEEEEC-SSEEEEEESSSSCCCEEE
T ss_pred eeeCCCC----cEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecC-C-CeEEEEc-CCeeEEecccCCCCchhh
Confidence 3455655 4666665 57999999999888877764 45677777764 3 4555544 467999999743 45555
Q ss_pred eccccC-CCCceEEEEEccCCCEEEEEec-------CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccc
Q psy10348 95 FGGVEG-HRDEVLSADFDLLGTKIMSCGM-------DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFS 166 (291)
Q Consensus 95 ~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
+..... ....|..-..+++.++++..+- .|.+.+|..+.... .
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-----------------------------Q 192 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-----------------------------Q 192 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-----------------------------E
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-----------------------------c
Confidence 531111 1356777778888887765432 46677777665431 1
Q ss_pred cccccCcceeEEEEcCC-----EEEEecC---CCeEEEecCCCCCccccccCCCceeeeeee-cCCcccEEEEEEEecCC
Q psy10348 167 TRDIHRNYVDCVRWLGD-----FVLSKSC---ENCIICWKPGRLEDKELRTNETNVTIINRL-NFKDCEIWFIRFSMDYW 237 (291)
Q Consensus 167 ~~~~~~~~v~~~~~~~~-----~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 237 (291)
..++|.+....+...|+ +++.+.. .+.+++-++....... .+.. .+.+.-+ ......-.-+++..++.
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~-~~f~--kk~vdv~fppe~~~DFPvamqvs~k 269 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFP--KKAVDVFFPPEAQNDFPVAMQISEK 269 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC-CCCC--CEEEECCCCTTSTTCCEEEEEEETT
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC-CCcc--ceeeeeeCCcccccCceeEEEeccc
Confidence 12334443333333321 2222222 3789999986541100 0000 0111111 11111112234555566
Q ss_pred CcEEEEEcCCCcEEEEEcCCCCC
Q psy10348 238 QKILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 238 ~~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
-..++.-+.-|.|.+||+.++.+
T Consensus 270 ygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCE
T ss_pred CCEEEEEecCceEEEEeccccee
Confidence 88899999999999999999863
No 318
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.65 E-value=0.16 Score=39.65 Aligned_cols=23 Identities=9% Similarity=0.284 Sum_probs=15.2
Q ss_pred CcEEEEEcCCC------cEEEEEcCCCCC
Q psy10348 238 QKILAVGNQSG------RTYVWDLDVQDP 260 (291)
Q Consensus 238 ~~~l~~~~~dg------~i~vwd~~~~~~ 260 (291)
+++++.|+.++ .|.++++++++.
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 78888888543 366668887764
No 319
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.29 E-value=0.44 Score=40.59 Aligned_cols=201 Identities=6% Similarity=-0.063 Sum_probs=112.6
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee------eccceeEEEEecCCCcEEEEeecCCeEEEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG------HGHAINELKFHPQDFNLLLSVSKDHTLRLW 84 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 84 (291)
..+.+++|.+... .++.+=...+.|+.++.+.......+.. ....+..|++....+++..+-+..+.|.+.
T Consensus 340 ~~~~~ld~d~~~~---~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~ 416 (628)
T 4a0p_A 340 RNVRAIDYDPLDK---QLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVT 416 (628)
T ss_dssp SCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEecCCC---eEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEE
Confidence 5577888887653 3444445567888888764333333322 234578999988445566677778899999
Q ss_pred ECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec-CC--cEEEEeccCchhhhhhccccccCCCCccccccCcccc
Q psy10348 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DH--SLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161 (291)
Q Consensus 85 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
++. |+....+. .........+++.|...+|+.+.. .. .|...++.... ...+.
T Consensus 417 ~~~-G~~~~~l~--~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~-~~~l~-------------------- 472 (628)
T 4a0p_A 417 RLD-GRSVGVVL--KGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE-REVLF-------------------- 472 (628)
T ss_dssp ETT-SCEEEEEE--ECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS-CEEEE--------------------
T ss_pred ECC-CCeEEEEE--eCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC-cEEEE--------------------
Confidence 986 55544441 234466899999995555554433 22 45555544322 11110
Q ss_pred CcccccccccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCC
Q psy10348 162 FPQFSTRDIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQ 238 (291)
Q Consensus 162 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (291)
...-...+.++++ .+.|+.+ +..+.|...++..... +.+.. ........++ ... +
T Consensus 473 -------~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r----------~~~~~--~~~~~P~gla--v~~-~ 530 (628)
T 4a0p_A 473 -------FSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANR----------IVLED--SNILQPVGLT--VFE-N 530 (628)
T ss_dssp -------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEC--SSCSCEEEEE--EET-T
T ss_pred -------eccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCce----------EEEEc--CCCCCcEEEE--EEC-C
Confidence 0012235677777 4455544 4468899998865432 11211 1111223333 332 4
Q ss_pred cEEEEEcCCCcEEEEEcCCCCC
Q psy10348 239 KILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 239 ~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
.++.+=...+.|...|..+++.
T Consensus 531 ~ly~tD~~~~~i~~~~k~~G~~ 552 (628)
T 4a0p_A 531 WLYWIDKQQQMIEKIDMTGREG 552 (628)
T ss_dssp EEEEEETTTTEEEEEETTSSSC
T ss_pred EEEEEECCCCeEEEEECcCCCC
Confidence 5555555677888888877653
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.14 E-value=0.36 Score=44.84 Aligned_cols=198 Identities=11% Similarity=0.200 Sum_probs=107.1
Q ss_pred CEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-ceeeeeccccCC----
Q psy10348 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-ICIAIFGGVEGH---- 101 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~---- 101 (291)
+.+|.=. ..++.|+|+++...++.+.- ..+|.-=.|-. .+.|+-.+ +..|.-|++... .+.+.+ ..|
T Consensus 78 ~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~~s~P~k~f---dR~~~L~ 149 (1630)
T 1xi4_A 78 KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMF---DRHSSLA 149 (1630)
T ss_pred ceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecC--CCeeEEEc-CCeEEEeccCCCCccHHHH---hcchhcc
Confidence 4666654 57899999998887776653 45566667764 24555544 457999999742 344444 233
Q ss_pred CCceEEEEEccCCCEEEEEe-------cCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc--c--c
Q psy10348 102 RDEVLSADFDLLGTKIMSCG-------MDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR--D--I 170 (291)
Q Consensus 102 ~~~i~~~~~~~~~~~l~~~~-------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~ 170 (291)
...|..-..+++.++++..| ..|.+.+|..+.+... .+.. +...|... . .
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~ieg------------------ha~~F~~~~~~~~~ 210 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEG------------------HAASFAQFKMEGNA 210 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhH------------------hHhhhheeccCCCC
Confidence 45677777788888776443 3577888877654321 1111 00000000 0 0
Q ss_pred cCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeee-ecCCcccEEEEEEEecCCCcEEEEEcCCCc
Q psy10348 171 HRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINR-LNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249 (291)
Q Consensus 171 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~ 249 (291)
+...+.|.+... ...+.++|-++....... .+... +.+.- +......-.-+++..++.-..+..-+.-|.
T Consensus 211 ~~~~l~~f~~~~------~~g~kLhi~Ei~~~~~~~-~~f~k--k~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 211 EESTLFCFAVRG------QAGGKLHIIEVGTPPTGN-QPFPK--KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred CCceEEEEEEec------CCCceEEEEecCCCccCC-CCCcc--ccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 112222222211 113688888886541100 00000 00111 111101111234455566788888999999
Q ss_pred EEEEEcCCCCC
Q psy10348 250 TYVWDLDVQDP 260 (291)
Q Consensus 250 i~vwd~~~~~~ 260 (291)
|.+||+.++.+
T Consensus 282 ~~~~d~~t~~~ 292 (1630)
T 1xi4_A 282 IHLYDLETGTC 292 (1630)
T ss_pred EEEEecccchh
Confidence 99999999864
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.07 E-value=0.34 Score=37.17 Aligned_cols=101 Identities=9% Similarity=0.023 Sum_probs=51.4
Q ss_pred EEEEecCCCeEEEEccCCcceeEEEeee--ccceeEEEEecCCCcEEEEeec----CC-------eEEEEECCCcceeee
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVRHFYGH--GHAINELKFHPQDFNLLLSVSK----DH-------TLRLWNIKTDICIAI 94 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~----dg-------~i~vwd~~~~~~~~~ 94 (291)
+++.|+. .+..||..+++-.. .... ........... ++.+++.|+. ++ .+.+||..+++....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 5556654 48899998876443 2111 11111222233 6677777773 12 177888877654332
Q ss_pred eccccCCCCceEEEEEccCCCEEEEEecC-------CcEEEEeccCch
Q psy10348 95 FGGVEGHRDEVLSADFDLLGTKIMSCGMD-------HSLKLWDLTKPE 135 (291)
Q Consensus 95 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~ 135 (291)
..+......-..+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 94 -~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 138 (318)
T 2woz_A 94 -PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK 138 (318)
T ss_dssp -SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE
T ss_pred -CCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC
Confidence 111222222222222 56677777754 246777776554
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.06 E-value=0.34 Score=37.09 Aligned_cols=185 Identities=10% Similarity=0.083 Sum_probs=90.8
Q ss_pred EEEEecCCCeEEEEccCCcceeE-EEeeeccceeEEEEecCCCcEEEEeec----C-------CeEEEEECCCcceeeee
Q psy10348 28 LLAVAGSRAVIRIFSPAFHACVR-HFYGHGHAINELKFHPQDFNLLLSVSK----D-------HTLRLWNIKTDICIAIF 95 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~----d-------g~i~vwd~~~~~~~~~~ 95 (291)
+++.|+ ..+.+||..+++-.. .+.............. ++.+++.|+. + ..+.+||..+++... +
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence 556666 579999998876432 1111111122222233 6677777773 1 127788888765432 2
Q ss_pred ccccCCCCceEEEEEccCCCEEEEEecC--------CcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccc
Q psy10348 96 GGVEGHRDEVLSADFDLLGTKIMSCGMD--------HSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167 (291)
Q Consensus 96 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
..+......-..+.+ ++..++.|+.+ ..+.+||+.+.+-...- + .+
T Consensus 83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-------~-------------~p---- 136 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-------P-------------LP---- 136 (315)
T ss_dssp CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-------C-------------CS----
T ss_pred CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-------C-------------CC----
Confidence 111211111122222 55666666642 34778887765421100 0 00
Q ss_pred ccccCcceeEEEEcCCEEEEecC-C-----CeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEE
Q psy10348 168 RDIHRNYVDCVRWLGDFVLSKSC-E-----NCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241 (291)
Q Consensus 168 ~~~~~~~v~~~~~~~~~l~~~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 241 (291)
.....-..+.+.+.+++.|+. + ..+.+||..+..-.. +..+........ .... +++++
T Consensus 137 --~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~----------~~~~p~~r~~~~--~~~~--~~~iy 200 (315)
T 4asc_A 137 --YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE----------LAPMQTARSLFG--ATVH--DGRII 200 (315)
T ss_dssp --SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEE----------CCCCSSCCBSCE--EEEE--TTEEE
T ss_pred --CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEE----------CCCCCCchhceE--EEEE--CCEEE
Confidence 011112233344666677765 2 468888887653211 111111111111 1223 37788
Q ss_pred EEEcCCC-----cEEEEEcCCC
Q psy10348 242 AVGNQSG-----RTYVWDLDVQ 258 (291)
Q Consensus 242 ~~~~~dg-----~i~vwd~~~~ 258 (291)
+.|+.++ .+.+||+.+.
T Consensus 201 v~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 201 VAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEEECSSSEEEEEEEEETTTT
T ss_pred EEeccCCCCccceEEEEECCCC
Confidence 8887654 5888888775
No 323
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.04 E-value=0.39 Score=37.62 Aligned_cols=106 Identities=12% Similarity=0.093 Sum_probs=58.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEE---E----eeeccceeEEEEecC---CCcEEEEeec---
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH---F----YGHGHAINELKFHPQ---DFNLLLSVSK--- 77 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~l~s~~~--- 77 (291)
.....++|.|++ ..|+++...|.|++++.. ++.... + .........|+++|+ ++.+.++-..
T Consensus 18 ~~P~~i~~~pdG----~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDN----HGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTT----CCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCC----CEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 456789999988 425566678999999854 332111 1 111345688999993 3444444332
Q ss_pred ----CCeEEEEECCCc--c--eee-eecccc---CCCCceEEEEEccCCCEEEEEe
Q psy10348 78 ----DHTLRLWNIKTD--I--CIA-IFGGVE---GHRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 78 ----dg~i~vwd~~~~--~--~~~-~~~~~~---~~~~~i~~~~~~~~~~~l~~~~ 121 (291)
...|..+++..+ . ... .+..+. ........++|.|+|.+.++.+
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 235666666432 1 111 111111 1112235799999996555543
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.01 E-value=0.021 Score=41.14 Aligned_cols=106 Identities=15% Similarity=-0.016 Sum_probs=63.9
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcce------eEEEee-eccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHAC------VRHFYG-HGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
..+..++|+|++ .+.++ .+|.++-.+..+... -..+-. --..-.++.|.| ++.+.++ .||.|.-
T Consensus 41 ~~~~~laf~P~G----~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 41 SNFKFLFLSPGG----ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYK 111 (236)
T ss_dssp TTCSEEEECTTS----CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEE
T ss_pred ccceeEEECCCc----cEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEE
Confidence 356799999988 35555 778877777654221 112210 001147889999 8888777 5699988
Q ss_pred EECCCcceeeeecc--c--cCCCCceEEEEEccCCCEEEEEecCCcEE
Q psy10348 84 WNIKTDICIAIFGG--V--EGHRDEVLSADFDLLGTKIMSCGMDHSLK 127 (291)
Q Consensus 84 wd~~~~~~~~~~~~--~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 127 (291)
++-.+.....-+.. . ..--..+..|.+.|+|.+.+.. |+.++
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 87643211111000 0 1122567999999999866666 77754
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.88 E-value=0.46 Score=37.18 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=35.2
Q ss_pred EEecCCCcEEEEEc-CCCcEEEEEcCCCCCCcceeEEEeccccccceeeeEEcc-CCceee
Q psy10348 232 FSMDYWQKILAVGN-QSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK-NGNVLL 290 (291)
Q Consensus 232 ~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~ 290 (291)
++++||++.|+++. ..+.|..|++.....+.. ...+.. .+..-.+++.+ +|++.+
T Consensus 226 ia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~-~~~~~~---~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 226 INISPDGKYVYIAELLAHKIHVYEKHANWTLTP-LRVLSF---DTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE-EEEEEC---SSEEEEEEECTTTCCEEE
T ss_pred ceECCCCCEEEEEeCCCCeEEEEEECCCCcEec-CEEEeC---CCCCceEEEeCCCCcEEE
Confidence 56678898877664 678999999874322211 122222 35677888998 588765
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.75 E-value=0.52 Score=36.77 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=45.7
Q ss_pred CEEEEecCC-CeEEEEccCC--cc--eeEEEeeeccceeEEEEecCCCcEEEEeec-C---------CeEEEEECCCcce
Q psy10348 27 PLLAVAGSR-AVIRIFSPAF--HA--CVRHFYGHGHAINELKFHPQDFNLLLSVSK-D---------HTLRLWNIKTDIC 91 (291)
Q Consensus 27 ~~l~~~~~d-g~i~vw~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-d---------g~i~vwd~~~~~~ 91 (291)
.+++.|+.+ ..+.+||+.+ .+ .+..+......-.+++.. ++.+++.|+. + ..+.+||+.+.+.
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 466666643 5788898864 22 221111011111223333 5577777765 2 3588999987654
Q ss_pred eeeecccc-CCCCceEEEEEccCCCEEEEEecC
Q psy10348 92 IAIFGGVE-GHRDEVLSADFDLLGTKIMSCGMD 123 (291)
Q Consensus 92 ~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d 123 (291)
...- .+. .....-.++. .+++.++.|+.+
T Consensus 99 ~~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLM-SHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EECS-CCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EECC-CCCCcccccceEEE--ECCEEEEEeCcC
Confidence 4322 112 1111222222 456777777754
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.69 E-value=0.15 Score=39.64 Aligned_cols=109 Identities=9% Similarity=-0.017 Sum_probs=65.1
Q ss_pred cEEEEeecCCeEEEEECCCcceeeeeccccCCCCceEEEEEc--cCCCEEEEE--ecCCcEEEEeccCchhhhhhccccc
Q psy10348 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD--LLGTKIMSC--GMDHSLKLWDLTKPEIKDACAESYT 145 (291)
Q Consensus 70 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~ 145 (291)
.+++.++.||.|.-.|.++|+....+.. ....++....-. +.+..++.+ +.||.|..++..++.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~--~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~-- 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEP--ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR-- 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECG--GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH--
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecC--CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc--
Confidence 5788899999999999999999988732 111233221100 112234433 57999999998877433211100
Q ss_pred cCCCCccccccCccccCcccccccccCcceeE---EEE-------cCCEEEEecCCCeEEEecCCCCCc
Q psy10348 146 FNPARSTRPFDTQKEHFPQFSTRDIHRNYVDC---VRW-------LGDFVLSKSCENCIICWKPGRLED 204 (291)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-------~~~~l~~~~~d~~i~iwd~~~~~~ 204 (291)
.. ....++.. ... .+..+++|+.++++...|+++++.
T Consensus 87 ------------------~l----v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 87 ------------------QL----VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp ------------------HH----HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred ------------------cc----eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 00 00111110 001 266889999999999999999866
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.62 E-value=0.4 Score=34.58 Aligned_cols=185 Identities=8% Similarity=-0.004 Sum_probs=85.1
Q ss_pred CcEEEEeecCCeEEEEECCCcc------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhcc
Q psy10348 69 FNLLLSVSKDHTLRLWNIKTDI------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE 142 (291)
Q Consensus 69 ~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 142 (291)
..+|++...| +++.=....+. ....+. .+--..+..++|+|+|.+.++ .+|.+.-.+..+.....-+..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG--~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIG--KGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEE--SSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccC--ccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc
Confidence 4566666776 65554444333 112221 111246779999998875555 678777766544322111110
Q ss_pred ccccCCCCccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec
Q psy10348 143 SYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN 221 (291)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (291)
.. .+- ..--..-.++.|+ ...|+.. .||.|.-++-.+....... .....+..-
T Consensus 79 ~t-------------------~IG--~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl---~~a~~vg~~- 132 (236)
T 1tl2_A 79 AK-------------------KIG--NGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWI---ARATEVGSG- 132 (236)
T ss_dssp CE-------------------EEE--CSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHH---HHSEEEECS-
T ss_pred cc-------------------Eec--ccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCcee---ccccEeccC-
Confidence 00 000 0000113577777 2234433 6799988875332221000 000111110
Q ss_pred CCcccEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcc--eeEEEeccccccceeeeEEccCCceee
Q psy10348 222 FKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSI--KFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 222 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
.=..+ ..+.++|+|.+.++. |+.++-....+...... ....+.. ..-..-+-+.|.++|.+.+
T Consensus 133 -gw~~~--~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~-~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 133 -GWSGF--KFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQ-GGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp -SGGGE--EEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEES-SSGGGEEEEEECTTSCEEE
T ss_pred -CCCce--EEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceecc-CCcceEEEEEECCCCcEEE
Confidence 00122 345667889888888 77754333332211110 1122221 1122344577888887654
No 329
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.61 E-value=0.91 Score=38.63 Aligned_cols=158 Identities=6% Similarity=-0.105 Sum_probs=92.1
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
..+.+++|.+... .++++-...+.|+.++++.......+...-.....+++....+++.++-...+.|.+.++....
T Consensus 349 ~~~~~ld~d~~~~---~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 349 RHAIAIDYDPVEG---YIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp SSEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEcCCC---eEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 3456777777542 3444545577888888775443333333334677899986456666766677899999987443
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEec--CCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM--DHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
...+. ...-.....+++.|....|+.+.. ...|...++..... ..+.
T Consensus 426 -~~~l~--~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~--------------------------- 474 (619)
T 3s94_A 426 -RKILI--SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLV--------------------------- 474 (619)
T ss_dssp -CEEEE--CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEE---------------------------
T ss_pred -EEEEE--ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEE---------------------------
Confidence 33331 233456789999997556665543 24555555543221 1110
Q ss_pred cccCcceeEEEEc--CCEEEEe-cCCCeEEEecCCCC
Q psy10348 169 DIHRNYVDCVRWL--GDFVLSK-SCENCIICWKPGRL 202 (291)
Q Consensus 169 ~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~ 202 (291)
...-.....|+++ .+.|+.+ +..+.|..+++...
T Consensus 475 ~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 475 NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 0012335567776 4444444 44678888887654
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.52 E-value=2.1 Score=37.00 Aligned_cols=107 Identities=16% Similarity=0.116 Sum_probs=57.9
Q ss_pred CEEEEecCC----CeEEEEccCCcceeEEE-e------eeccceeEEEEecCCCcEEEEeecCC------eEEEEECCCc
Q psy10348 27 PLLAVAGSR----AVIRIFSPAFHACVRHF-Y------GHGHAINELKFHPQDFNLLLSVSKDH------TLRLWNIKTD 89 (291)
Q Consensus 27 ~~l~~~~~d----g~i~vw~~~~~~~~~~~-~------~~~~~v~~~~~~~~~~~~l~s~~~dg------~i~vwd~~~~ 89 (291)
.+++.||.+ ..+.+||..+++-...- . .....-.+++..+.++.+++.|+.++ .+.+||..+.
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 577777753 46888888776543222 1 01111122333311456777776543 4788998876
Q ss_pred ceeeeeccccCCCCceEEEEEccCCCEEEEEecCC--cEEEEeccCch
Q psy10348 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH--SLKLWDLTKPE 135 (291)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~ 135 (291)
+.... ..+......- +++...++..++.|+.++ .+.+||+.+.+
T Consensus 479 ~W~~~-~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 479 EWSMI-KSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp EEEEC-CCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred cEEEC-CCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 54332 1112111122 223323778888887754 68889887754
No 331
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.98 E-value=2.5 Score=38.10 Aligned_cols=37 Identities=24% Similarity=0.528 Sum_probs=31.4
Q ss_pred ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348 58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF 95 (291)
Q Consensus 58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 95 (291)
.+.+++..+ +..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 466777777 7789999999999999999999888764
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.48 E-value=2.5 Score=36.53 Aligned_cols=107 Identities=16% Similarity=0.149 Sum_probs=58.2
Q ss_pred CEEEEecCC------CeEEEEccCCcceeE--EEeeeccceeEEEEecCCCcEEEEeecCC--eEEEEECCCcceeeeec
Q psy10348 27 PLLAVAGSR------AVIRIFSPAFHACVR--HFYGHGHAINELKFHPQDFNLLLSVSKDH--TLRLWNIKTDICIAIFG 96 (291)
Q Consensus 27 ~~l~~~~~d------g~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~ 96 (291)
.+++.||.+ +.+.+||..+.+-.. .+.. ...-.+++... ++.+++.|+.++ .+.+||..+.+....-.
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~-~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH-TRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-CCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-CcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 477777654 357788887653221 1111 11112233323 667888887655 68999998765433210
Q ss_pred --cccCCCCceEEEEEccC-CCEEEEEec--C-----CcEEEEeccCch
Q psy10348 97 --GVEGHRDEVLSADFDLL-GTKIMSCGM--D-----HSLKLWDLTKPE 135 (291)
Q Consensus 97 --~~~~~~~~i~~~~~~~~-~~~l~~~~~--d-----~~i~v~d~~~~~ 135 (291)
.+......-.++.+..+ +..++.|+. + ..+.+||+.+..
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 01111222233555555 566777765 2 358888887765
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.46 E-value=2.6 Score=34.28 Aligned_cols=108 Identities=10% Similarity=0.119 Sum_probs=60.2
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EEee------eccceeEEEEecC---CCcEEEEeec--
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HFYG------HGHAINELKFHPQ---DFNLLLSVSK-- 77 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~~l~s~~~-- 77 (291)
.....++|.|++ .++++-...+.|++++..+++... .+.. .......|+|+|+ ++.+.++-+.
T Consensus 27 ~~P~~~a~~pdG----~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 27 NKPHALLWGPDN----QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SSEEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCceEEEEcCCC----cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 455789999998 366654443579888865554322 2211 1345668999994 4444444332
Q ss_pred ----------CCeEEEEECCCc-----ceeeeecccc-CCCCceEEEEEccCCCEEEEEec
Q psy10348 78 ----------DHTLRLWNIKTD-----ICIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGM 122 (291)
Q Consensus 78 ----------dg~i~vwd~~~~-----~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~ 122 (291)
...|.-++...+ .....+..+. ........++|.|+|.+.++.+.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234665655322 1111111111 12235788999999987776554
No 334
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.13 E-value=4.1 Score=35.56 Aligned_cols=115 Identities=10% Similarity=-0.063 Sum_probs=64.7
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-----cee---EEEee----eccceeEEEEecCCCcEEEE-eecC
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-----ACV---RHFYG----HGHAINELKFHPQDFNLLLS-VSKD 78 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-----~~~---~~~~~----~~~~v~~~~~~~~~~~~l~s-~~~d 78 (291)
.|.++....++ .|..|+..+-+.++|..+. ... ..+.. ....|.++...+ ++.+.+. +..+
T Consensus 420 ~v~~i~~d~~g-----~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~ 493 (758)
T 3ott_A 420 WTYYIFEDTAG-----QLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNK 493 (758)
T ss_dssp SEEEEEECTTS-----EEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCS
T ss_pred eEEEEEEcCCC-----CEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCC
Confidence 46666555444 6677776667888875431 111 11111 123488888887 7776653 4444
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 135 (291)
-+..+|..+++..............+.++....+|.+.+. +.. -+..+|..+.+
T Consensus 494 -Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~ 547 (758)
T 3ott_A 494 -GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDES 547 (758)
T ss_dssp -SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CC
T ss_pred -CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCc
Confidence 4888898776544322100111346788888877876554 444 48888876554
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.66 E-value=2.9 Score=32.60 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=62.3
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeE--EE----eeeccceeEEEEecC---CCcEEEEe--ecCC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVR--HF----YGHGHAINELKFHPQ---DFNLLLSV--SKDH 79 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~----~~~~~~v~~~~~~~~---~~~~l~s~--~~dg 79 (291)
..-..++|.|++ .++++--..|.|++++..+++... .+ .........|+++|+ ++.+.++- ..+.
T Consensus 32 ~~P~~ia~~pdG----~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 32 NSPWGLAPLPGG----DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp SSEEEEEECTTS----CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCceEEEEcCCC----cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 556789999998 466665558999999876555321 11 112456789999983 34444432 2345
Q ss_pred eEEEEECCCcc--------eeeeecccc-CCCCceEEEEEccCCCEEEEEec
Q psy10348 80 TLRLWNIKTDI--------CIAIFGGVE-GHRDEVLSADFDLLGTKIMSCGM 122 (291)
Q Consensus 80 ~i~vwd~~~~~--------~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~ 122 (291)
.|.-|.+..+. ....+..+. .....-..+.|.|+|.+.++.+.
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 66666655421 111111111 11223456899999987666553
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.51 E-value=3 Score=32.50 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=38.0
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCC-----CeEEEEccCCcce------eEEEee---eccceeEEEEecCCCcEEEEe
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSR-----AVIRIFSPAFHAC------VRHFYG---HGHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~------~~~~~~---~~~~v~~~~~~~~~~~~l~s~ 75 (291)
......++++|+...++.++++-... +.|..++...+.. +..+.. .......++|.| ++.+.++-
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~ 152 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTT 152 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEEC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEE
Confidence 35678999999843333344444432 6788888764321 111221 011236899999 88776664
Q ss_pred e
Q psy10348 76 S 76 (291)
Q Consensus 76 ~ 76 (291)
+
T Consensus 153 G 153 (352)
T 2ism_A 153 G 153 (352)
T ss_dssp C
T ss_pred C
Confidence 3
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.15 E-value=3.3 Score=32.05 Aligned_cols=205 Identities=12% Similarity=0.091 Sum_probs=115.2
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeec----cceeEEEEecCCCcEEEEee-------c
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHG----HAINELKFHPQDFNLLLSVS-------K 77 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~-------~ 77 (291)
.+.|.--.|-.+. .|+..+. ..|+-|+++. ..+.+.+..|. ..|..-..++ +.++++..+ -
T Consensus 106 ~e~VvfWkWis~~-----~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v 178 (365)
T 2xzh_A 106 TDDVTFWKWISLN-----TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRV 178 (365)
T ss_dssp SSCEEEEEECSSS-----EEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEE
T ss_pred CCccEEEEecCCC-----eEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCcc
Confidence 3555555554443 5555554 5899999874 45667776654 3566666677 666655432 2
Q ss_pred CCeEEEEECCCcceeeeeccccCCCCceEEEEEccC---CCEEEEEec---CCcEEEEeccCc-hhhhhhcc---ccccC
Q psy10348 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL---GTKIMSCGM---DHSLKLWDLTKP-EIKDACAE---SYTFN 147 (291)
Q Consensus 78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---d~~i~v~d~~~~-~~~~~~~~---~~~~~ 147 (291)
.|.+.+|..+.+ .-+.+ .+|...-..+....+ .+.|+.+.. .+.+++.++... .....+.. .+.|.
T Consensus 179 ~G~mQLYS~er~-~sQ~i---eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fp 254 (365)
T 2xzh_A 179 VGAMQLYSVDRK-VSQPI---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 254 (365)
T ss_dssp EEEEEEEETTTT-EEEEE---CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCC
T ss_pred ceeEEEEeeccc-cccee---eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCC
Confidence 377899998754 33444 677665544443222 113443433 257888888543 11111110 11111
Q ss_pred CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC 225 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
| ++..+---++..+ .+.++.-+.-|.|++||+.++.+ +..-.....
T Consensus 255 p--------------------ea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~------------i~~nrIS~d 302 (365)
T 2xzh_A 255 P--------------------EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC------------IYMNRISGE 302 (365)
T ss_dssp T--------------------TCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE------------EEEEECCSS
T ss_pred c--------------------cccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE------------EEEeccCCC
Confidence 1 1123333455555 55777788899999999999955 555444455
Q ss_pred cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
.|...+. +.+..=++.....|.|.-..++...
T Consensus 303 ~iF~ta~--~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 303 TIFVTAP--HEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CEEEEEE--EGGGTEEEEEETTCEEEEEEECTTT
T ss_pred ceEEecc--cCCCCcEEEEcCCCEEEEEEECccc
Confidence 5544332 2223444444477877777777654
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.51 E-value=6.6 Score=34.26 Aligned_cols=222 Identities=11% Similarity=0.072 Sum_probs=114.0
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
..|.++.-..++ .|..|+.+| +..||..+.+...........|.++.. . ++. |..++.+ -+..+|..+++
T Consensus 63 ~~i~~i~~d~~g-----~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~-~g~-lWigt~~-Gl~~~~~~~~~ 132 (758)
T 3ott_A 63 TRIYCGVIIDNT-----YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-Q-GDT-LWLGALN-GLYTYQLQSRK 132 (758)
T ss_dssp SCEEEEEEETTT-----EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-E-TTE-EEEEETT-EEEEEETTTCC
T ss_pred ceEEEEEEcCCC-----cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-c-CCc-EEEEcCC-cceeEeCCCCe
Confidence 457777665554 677777665 788998776433211111234666654 3 444 4455555 58888987655
Q ss_pred eeeeecc-ccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCccccccc
Q psy10348 91 CIAIFGG-VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169 (291)
Q Consensus 91 ~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (291)
....... .......|.++....++.+.+ |+.+ -+..++..+++... +. . +... .
T Consensus 133 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~----~-~~~~-----------------~ 187 (758)
T 3ott_A 133 LTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IP----L-PVHS-----------------S 187 (758)
T ss_dssp EEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-EC----C-CCCT-----------------T
T ss_pred EEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ec----C-CCcc-----------------c
Confidence 3322000 011235688888887777555 4444 47778876544211 00 0 0000 0
Q ss_pred ccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCC
Q psy10348 170 IHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247 (291)
Q Consensus 170 ~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 247 (291)
.....|.++..+ ++.|..|+. +-+..+|..+.+.. ....+ ... .+.++..+.+|.+.+ |+.+
T Consensus 188 ~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~----------~~~~l--~~~--~i~~i~~d~~g~lWi-gT~~ 251 (758)
T 3ott_A 188 QSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK----------QTEAF--HNN--SIKSLALDGNGDLLA-GTDN 251 (758)
T ss_dssp CSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE----------EEEEE--EEE--EEEEEEECTTCCEEE-EETT
T ss_pred cccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE----------eccCC--CCC--eEEEEEEcCCCCEEE-EeCC
Confidence 012347777766 455555663 56778887654321 11111 111 233455566565544 4444
Q ss_pred CcEEEEEcCCCCCCcceeEEEecc------ccccceeeeEEccCCcee
Q psy10348 248 GRTYVWDLDVQDPSSIKFQILSHP------RCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 248 g~i~vwd~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~g~~l 289 (291)
| +.+++..+.+. ..+... -....|.++....+|.+-
T Consensus 252 G-l~~~~~~~~~~-----~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW 293 (758)
T 3ott_A 252 G-LYVYHNDTTPL-----QHIIHDSRNIQSLTNNIIWNIFADQEHNIW 293 (758)
T ss_dssp E-EEEECCTTSCC-----EEECCCTTCTTSCSCSCEEEEEECTTCCEE
T ss_pred c-eeEEecCCCcE-----EEEEcCCCCcCcCCcCeEEEEEEcCCCCEE
Confidence 4 77888765431 111110 112357777777766543
No 339
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.77 E-value=7.2 Score=31.81 Aligned_cols=109 Identities=14% Similarity=0.092 Sum_probs=60.7
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc---ceeEEEe-----e----eccceeEEEEecC---CCcEEEEe
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFY-----G----HGHAINELKFHPQ---DFNLLLSV 75 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~~~~-----~----~~~~v~~~~~~~~---~~~~l~s~ 75 (291)
+.-..++|.|++. ..|+++...|.|++++.... ..+..+. + .......|+|+|+ ++.+.++-
T Consensus 14 ~~P~~~a~~pdG~---~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 14 RQPVGALHSGDGS---QRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp SSEEEEECCSSSS---CCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCceEEEECCCCC---eEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 4556889999873 24666678899999975422 1222221 0 1346788999992 24444443
Q ss_pred ecC------------CeEEEEECCCc----------ceeeeeccccCCCCceEEEEEccCCCEEEEEecC
Q psy10348 76 SKD------------HTLRLWNIKTD----------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMD 123 (291)
Q Consensus 76 ~~d------------g~i~vwd~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 123 (291)
+.+ ..|.-|.+..+ +.+..+.. ......-..|+|.|||.+.++.+..
T Consensus 91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~-~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE-LHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE-SSSSSCEEEEEECTTSCEEEEECCT
T ss_pred eCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC-CCCcccCCcEeECCCCcEEEEeCCC
Confidence 321 13444655421 12222210 1222346789999999877766643
No 340
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.21 E-value=6.6 Score=30.63 Aligned_cols=75 Identities=9% Similarity=-0.032 Sum_probs=46.0
Q ss_pred cceeEEEEecCCCcEEEEeecCCeEEEEECCCcc-eeeeeccccCCCCceEEEEEccC---CCEEEEEec----C----C
Q psy10348 57 HAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDEVLSADFDLL---GTKIMSCGM----D----H 124 (291)
Q Consensus 57 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~----d----~ 124 (291)
.....|+|.| +++++++ ..+|.|+++|. +++ .+..+............++++|+ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~p-dG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4567899999 8875555 56699999973 454 22221100122356889999997 555555443 2 5
Q ss_pred cEEEEeccCc
Q psy10348 125 SLKLWDLTKP 134 (291)
Q Consensus 125 ~i~v~d~~~~ 134 (291)
.|..|+....
T Consensus 106 ~v~r~~~~~~ 115 (354)
T 3a9g_A 106 RVIRGRLDGS 115 (354)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEECCC
Confidence 6777776543
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.17 E-value=7.9 Score=31.46 Aligned_cols=33 Identities=0% Similarity=-0.177 Sum_probs=23.0
Q ss_pred CceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348 103 DEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135 (291)
Q Consensus 103 ~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 135 (291)
.....++|.|+|+++++-...+.|++++..++.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 456799999999866665444568888765443
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.15 E-value=5.8 Score=29.83 Aligned_cols=70 Identities=19% Similarity=0.177 Sum_probs=36.1
Q ss_pred cceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcEEE
Q psy10348 173 NYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYV 252 (291)
Q Consensus 173 ~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~v 252 (291)
..|..++....+.+.- .||.|..|=........... . ....+.. ++... ...++.. ||.|..
T Consensus 180 ~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~--------~----~~~~v~~--i~~G~-~h~~al~--~g~v~~ 241 (282)
T 3qhy_B 180 SGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPT--------E----ALSGVSA--IASGE-WYSLALK--NGKVIA 241 (282)
T ss_dssp SSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCG--------G----GGSSCCE--EEECS-SCEEEEE--TTEEEE
T ss_pred CCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCc--------c----cCCCceE--EEcCC-CEEEEEE--CCEEEE
Confidence 3466776654443334 69999999655443221100 0 0112222 33321 2344444 899999
Q ss_pred EEcCCCCC
Q psy10348 253 WDLDVQDP 260 (291)
Q Consensus 253 wd~~~~~~ 260 (291)
|-.....+
T Consensus 242 wG~n~~gq 249 (282)
T 3qhy_B 242 WGSSRTAP 249 (282)
T ss_dssp ESTTCCCC
T ss_pred ecCCCCcc
Confidence 98776544
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.92 E-value=1.5 Score=40.42 Aligned_cols=37 Identities=24% Similarity=0.528 Sum_probs=30.5
Q ss_pred ceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348 58 AINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIF 95 (291)
Q Consensus 58 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 95 (291)
.+.+++..+ +..++++-+.|+++|+|++.+++++...
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445566666 7789999999999999999999988764
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.69 E-value=8.5 Score=31.19 Aligned_cols=205 Identities=12% Similarity=0.090 Sum_probs=118.0
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeeec----cceeEEEEecCCCcEEEEee-------c
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHG----HAINELKFHPQDFNLLLSVS-------K 77 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~-------~ 77 (291)
.+.|.--.|-.+. .|+..+. ..|+-|+++. ..+.+.+..|. ..|..-..++ +.++++..+ -
T Consensus 105 ~e~VvfWkWis~~-----~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v 177 (494)
T 1bpo_A 105 TDDVTFWKWISLN-----TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRV 177 (494)
T ss_dssp SSCCCEEEEEETT-----EEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEE
T ss_pred CCCceEEEecCCC-----eEEEEcC-CeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcc
Confidence 3455555565443 5666554 5899999974 35677777664 3566666677 666665432 3
Q ss_pred CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCC---CEEEEEec---CCcEEEEeccCc-hhhhhhc---cccccC
Q psy10348 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLG---TKIMSCGM---DHSLKLWDLTKP-EIKDACA---ESYTFN 147 (291)
Q Consensus 78 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~---d~~i~v~d~~~~-~~~~~~~---~~~~~~ 147 (291)
.|.+.+|..+.+. -+.+ .+|......+....+. ..|..+.. .+.+++.++... .....+. ..+.|.
T Consensus 178 ~G~mQLYS~er~~-sQ~i---eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp 253 (494)
T 1bpo_A 178 VGAMQLYSVDRKV-SQPI---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (494)
T ss_dssp EEEEEEEESTTCC-EEEE---CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC
T ss_pred cceEEEeeccccc-cchh---eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC
Confidence 4778999988543 3444 6787666555543221 23444443 278888888543 1111111 111222
Q ss_pred CCCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcc
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDC 225 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
| +...+---++..+ .+.++.-+.-|.|.+||+.++.. +..-.....
T Consensus 254 p--------------------e~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~------------i~~nrIs~~ 301 (494)
T 1bpo_A 254 P--------------------EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC------------IYMNRISGE 301 (494)
T ss_dssp T--------------------TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE------------EEEEECCSS
T ss_pred c--------------------ccccCceeEEEecccCCEEEEEecCceEEEEeccccee------------eeeecccCC
Confidence 2 1122333455555 45777788899999999999965 444444555
Q ss_pred cEEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 226 EIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 226 ~i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
.|...+.. .+..=++.....|.|.-..++...
T Consensus 302 ~iF~t~~~--~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 302 TIFVTAPH--EATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CEEEEEEE--TTTTEEEEEETTCEEEEEEECTTT
T ss_pred ceEEeccc--CCCCcEEEEccCceEEEEEEcccc
Confidence 55443322 334444444578888777777654
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.26 E-value=18 Score=34.38 Aligned_cols=204 Identities=12% Similarity=0.090 Sum_probs=104.5
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cceeEEEeee----ccceeEEEEecCCCcEEEEee-------cC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGH----GHAINELKFHPQDFNLLLSVS-------KD 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~-------~d 78 (291)
++|.--.|-... .|+..+. ..|+-|++.. ..+.+.+..| ...|..-..++ +.++++..+ -.
T Consensus 106 e~VvfWkWis~~-----~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~ 178 (1630)
T 1xi4_A 106 DDVTFWKWISLN-----TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVV 178 (1630)
T ss_pred CCceEEEecCCC-----eeEEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCccc
Confidence 445445554443 4555543 5799999963 3455555544 34566666677 666655432 35
Q ss_pred CeEEEEECCCcceeeeeccccCCCCceEEEEEcc--C-CCEEEEEec---CCcEEEEeccCc-hhhhhhc---cccccCC
Q psy10348 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL--L-GTKIMSCGM---DHSLKLWDLTKP-EIKDACA---ESYTFNP 148 (291)
Q Consensus 79 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~~~~---d~~i~v~d~~~~-~~~~~~~---~~~~~~~ 148 (291)
|.+.+|..+.+. .+.+ .+|.+....+.... . ...+..+.. .+.++|.++... .....+. ..+.|.|
T Consensus 179 G~mQLyS~er~~-sQ~i---egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~ 254 (1630)
T 1xi4_A 179 GAMQLYSVDRKV-SQPI---EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 254 (1630)
T ss_pred ceeeeeeccccc-chhh---hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCc
Confidence 889999987543 2333 56655544433321 1 123332222 268888888553 1111111 0111111
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEc--CCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCccc
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE 226 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
+ ...+-..++..+ -+.++.-+.-|.|.++|+.++... ..-......
T Consensus 255 ~--------------------~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i------------~~~ris~~~ 302 (1630)
T 1xi4_A 255 E--------------------AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI------------YMNRISGET 302 (1630)
T ss_pred c--------------------cccCcceEEEeccccCEEEEEecCceEEEEecccchhh------------hhccccCCc
Confidence 1 112222244444 446777788999999999998653 322223333
Q ss_pred EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCC
Q psy10348 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259 (291)
Q Consensus 227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 259 (291)
|...+ ++....-++.....|.|.-..+....
T Consensus 303 iF~~~--~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 303 IFVTA--PHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred eEEec--cCCCCCceEEEcCCceEEEEEEccch
Confidence 33322 22222333333466777666666554
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.56 E-value=7.4 Score=29.21 Aligned_cols=185 Identities=11% Similarity=0.063 Sum_probs=95.7
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecCCeEEEEECCCcc
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 90 (291)
..|..++..... .++. . ||.|..|-....-.+-.-......|..++... . ..++. . ||.|..|-.....
T Consensus 24 ~~i~~ia~G~~h-----~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~-~-hs~~l-~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 24 SGVDAIAGGYFH-----GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-Y-HSLAL-K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SSCCEEEECSSE-----EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECS-S-EEEEE-E-TTEEEEEECCTTS
T ss_pred CCCcEEEeCCCe-----EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCC-C-EEEEE-E-CCEEEEeeCCCCC
Confidence 456666665443 3444 4 89999997654221111111234677777664 3 44444 4 8999999765322
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcccccccc
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (291)
.+..- ..-...|..++...+ ..+.-. ||.|..|-......+.. + ..
T Consensus 93 qlg~P---~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-----------------------~-----~~ 138 (282)
T 3qhy_B 93 QTTVP---AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-----------------------P-----AE 138 (282)
T ss_dssp TTCCC---GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-----------------------C-----GG
T ss_pred CCCCC---cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-----------------------C-----cc
Confidence 21111 112346777776543 333334 89999997654322110 0 00
Q ss_pred cCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEEcCCCcE
Q psy10348 171 HRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRT 250 (291)
Q Consensus 171 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 250 (291)
....|..++....+.+.-. ||.|..|=........... . ....+. .++... ...++. .||.|
T Consensus 139 ~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~-----------~-~~~~v~--~i~~G~-~hs~al--~~G~v 200 (282)
T 3qhy_B 139 AQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPA-----------E-AQSGVD--DVAGGI-FHSLAL--KDGKV 200 (282)
T ss_dssp GGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCG-----------G-GGSSEE--EEEECS-SEEEEE--ETTEE
T ss_pred CCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCce-----------e-cCCCeE--EEEecC-CEEEEE--ECCeE
Confidence 1234666666544444344 7999999765433321000 0 012233 333321 334444 58999
Q ss_pred EEEEcCCC
Q psy10348 251 YVWDLDVQ 258 (291)
Q Consensus 251 ~vwd~~~~ 258 (291)
+.|-....
T Consensus 201 ~~wG~n~~ 208 (282)
T 3qhy_B 201 IAWGDNRY 208 (282)
T ss_dssp EEEECCTT
T ss_pred EEEECCCC
Confidence 99987654
No 347
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.36 E-value=14 Score=32.04 Aligned_cols=34 Identities=6% Similarity=0.211 Sum_probs=29.0
Q ss_pred CcceeEEEEcCCEEEEecCCCeEEEecCCCCCcc
Q psy10348 172 RNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDK 205 (291)
Q Consensus 172 ~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (291)
...|.++.+...++++-+.|.++|+|++.++...
T Consensus 221 ~~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv 254 (729)
T 3f7f_A 221 DSVISCKLFHERYLIVLTQNCHLKIWDLTSFTLI 254 (729)
T ss_dssp CCEEEEEEETTTEEEEEETTCEEEEEETTTTEEE
T ss_pred CceEEEeccCCcEEEEEEcCCeEEEEEcCCCceE
Confidence 3567888888889999999999999999998654
No 348
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=86.66 E-value=10 Score=29.95 Aligned_cols=205 Identities=10% Similarity=0.069 Sum_probs=98.8
Q ss_pred EEEEecCCCeEEEEccCCc-c----------eeEEEeee-ccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-c----
Q psy10348 28 LLAVAGSRAVIRIFSPAFH-A----------CVRHFYGH-GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-I---- 90 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~~-~----------~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~---- 90 (291)
..+.-..||.|+.|-.... + ....+... ...|..++... ...+.-..||.|..|-.... +
T Consensus 118 h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~ 194 (389)
T 3kci_A 118 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG---AHSACVTAAGDLYTWGKGRYGRLGHS 194 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred eEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc---CeEEEEeCCCeEEEeCCCCCCCcCCC
Confidence 5555677899999964321 1 01111111 12455555443 44555567999999965321 1
Q ss_pred ------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 91 ------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 91 ------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
....+. ......|..++........+.-..||.|..|-....-.+..-.. .....|. .
T Consensus 195 ~~~~~~~p~~v~--~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~------~~~~~p~--------~ 258 (389)
T 3kci_A 195 DSEDQLKPKLVE--ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS------DGCKVPM--------K 258 (389)
T ss_dssp SCCCEEEEEECG--GGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSC------CCEEEEE--------E
T ss_pred CCcccccceEec--ccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCC------CCccccE--------E
Confidence 111111 11234567776644335566667799999997544322211000 0000000 0
Q ss_pred cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecC-CcccEEEEEEEecCCCcEEEE
Q psy10348 165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNF-KDCEIWFIRFSMDYWQKILAV 243 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~ 243 (291)
+. ......|..++....+.+.-..||.|..|=.......-......... ...+.. .... ++.++.. ....++
T Consensus 259 v~--~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~-P~~v~~l~~~~--v~~ia~G--~~h~~a 331 (389)
T 3kci_A 259 ID--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR-PRQVQGLQGKK--VIAIATG--SLHCVC 331 (389)
T ss_dssp CG--GGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEE-EEECGGGTTCC--EEEEEEC--SSEEEE
T ss_pred ec--ccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccC-CeEeccCCCCC--EEEEEec--cCeEEE
Confidence 00 00122466666656666666789999999654322211111111111 111111 1122 3334433 445555
Q ss_pred EcCCCcEEEEEcCCC
Q psy10348 244 GNQSGRTYVWDLDVQ 258 (291)
Q Consensus 244 ~~~dg~i~vwd~~~~ 258 (291)
-..||.|+.|-....
T Consensus 332 l~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 332 CTEDGEVYTWGDNDE 346 (389)
T ss_dssp EETTCCEEEEECCTT
T ss_pred ECCCCCEEEeeCCCC
Confidence 678999999987643
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.26 E-value=6.9 Score=32.79 Aligned_cols=77 Identities=14% Similarity=0.079 Sum_probs=52.2
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEE-ecCCCeEEEEccCCcc------e-------eEEEeeeccceeEEEEecCCCcE
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAV-AGSRAVIRIFSPAFHA------C-------VRHFYGHGHAINELKFHPQDFNL 71 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~-~~~dg~i~vw~~~~~~------~-------~~~~~~~~~~v~~~~~~~~~~~~ 71 (291)
.+........+..+||+. ++++ |-.+.++.|+|.++.. . ....+ -.-.....+|.+ +|..
T Consensus 318 ~iP~pksPHGv~vsPDGk----yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~a 391 (638)
T 3sbq_A 318 YVPVPKNPHGCNTSSDGK----YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNA 391 (638)
T ss_dssp EEEESSSCCCEEECTTSC----EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEE
T ss_pred EEeCCCCCcceeeCCCCC----EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCce
Confidence 344456666788888885 5555 4568899999987421 1 22222 123456789999 8866
Q ss_pred EEEeecCCeEEEEECCC
Q psy10348 72 LLSVSKDHTLRLWNIKT 88 (291)
Q Consensus 72 l~s~~~dg~i~vwd~~~ 88 (291)
..|-.-|..|.-|++..
T Consensus 392 YTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEETTTTEEEEEEHHH
T ss_pred EeeeeecceEEEEeccH
Confidence 66777899999999874
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.96 E-value=32 Score=31.12 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=32.6
Q ss_pred ceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhc
Q psy10348 104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA 141 (291)
Q Consensus 104 ~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 141 (291)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777788888899999999999999999999877644
No 351
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=80.83 E-value=18 Score=28.14 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=53.7
Q ss_pred cceeEEEEeeeccCCCCCEEEEecC-------CCeEEEEccCCc--c--eeEE-Eeee------ccceeEEEEecCCCcE
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGS-------RAVIRIFSPAFH--A--CVRH-FYGH------GHAINELKFHPQDFNL 71 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~-------dg~i~vw~~~~~--~--~~~~-~~~~------~~~v~~~~~~~~~~~~ 71 (291)
......++++|+...++.+.++-.. ...|..|+...+ . ..+. +..- ...-..|+|.| ++.+
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~L 143 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYL 143 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcE
Confidence 3456899999962111134444322 235666666432 1 1111 1110 11235799999 8876
Q ss_pred EEEeec-------------CCeEEEEECCCcc------------eeeeeccccCCCCceEEEEEccCCCEEEEEe
Q psy10348 72 LLSVSK-------------DHTLRLWNIKTDI------------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 72 l~s~~~-------------dg~i~vwd~~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 121 (291)
.++-+. .|.|.-++....- ....+. .++ .....++|+|....|.++.
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a--~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS--YGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE--ECC-SEEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE--EcC-cCccceEEECCCCCEEEEe
Confidence 666433 2456666655210 111111 133 3467899999433444443
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.50 E-value=11 Score=31.63 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=51.2
Q ss_pred ccceeEEEEecCCCcEEEEe-ecCCeEEEEECCCcce-----e----eeeccccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348 56 GHAINELKFHPQDFNLLLSV-SKDHTLRLWNIKTDIC-----I----AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125 (291)
Q Consensus 56 ~~~v~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~-----~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 125 (291)
......+..+| +|++++.+ -.+.++.++|++.-.. + ..+.....-.......+|.++|.-..+-..|..
T Consensus 322 pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecce
Confidence 34557788999 77776664 4578899999874211 0 000000223456778999999954455557999
Q ss_pred EEEEeccCc
Q psy10348 126 LKLWDLTKP 134 (291)
Q Consensus 126 i~v~d~~~~ 134 (291)
|..|++...
T Consensus 401 vvkWni~~a 409 (638)
T 3sbq_A 401 VVKWNMEEA 409 (638)
T ss_dssp EEEEEHHHH
T ss_pred EEEEeccHH
Confidence 999999754
No 353
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=77.04 E-value=24 Score=27.47 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=48.0
Q ss_pred ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceee--eec-cccCCCCceEEEEEccC---CCEEEEE---ecCCcE
Q psy10348 56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIA--IFG-GVEGHRDEVLSADFDLL---GTKIMSC---GMDHSL 126 (291)
Q Consensus 56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~--~~~-~~~~~~~~i~~~~~~~~---~~~l~~~---~~d~~i 126 (291)
-.....|+|.| ++.++++--..|.|++++...++... .+. ...........++++|+ +..|+.. ..++.|
T Consensus 31 L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 34568999999 88877776558999999876554321 111 01223466889999995 4445443 234455
Q ss_pred EEEeccC
Q psy10348 127 KLWDLTK 133 (291)
Q Consensus 127 ~v~d~~~ 133 (291)
.-|.+..
T Consensus 110 ~R~~~~~ 116 (347)
T 3das_A 110 VRMLYDE 116 (347)
T ss_dssp EEEEBCT
T ss_pred EEEEeCC
Confidence 5565544
No 354
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=76.68 E-value=25 Score=27.48 Aligned_cols=104 Identities=10% Similarity=0.001 Sum_probs=56.5
Q ss_pred eEEEEeeeccCCCCCEEEEec-------------CCCeEEEEccCCcc-eeEEE--ee-----eccceeEEEEecC-CCc
Q psy10348 13 FYTCAWSMDLESGRPLLAVAG-------------SRAVIRIFSPAFHA-CVRHF--YG-----HGHAINELKFHPQ-DFN 70 (291)
Q Consensus 13 i~~~~~s~~~~~~~~~l~~~~-------------~dg~i~vw~~~~~~-~~~~~--~~-----~~~~v~~~~~~~~-~~~ 70 (291)
.-.+...|++ ++++++ .+|.|.++|+++.. ....+ .+ ..-....+.+.++ ++.
T Consensus 52 ~EDi~~~~~G-----~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 52 SEDLEILPNG-----LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp CCEEEECTTS-----EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred cceeEEcCCC-----eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence 4456666665 555554 68999999987421 12222 22 1235567777552 232
Q ss_pred -EEEEe-ec--CCeEEEEECCCc-ceeeeeccccC-CCCceEEEEEccCCCEEEEEe
Q psy10348 71 -LLLSV-SK--DHTLRLWNIKTD-ICIAIFGGVEG-HRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 71 -~l~s~-~~--dg~i~vwd~~~~-~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~ 121 (291)
+|+.+ .. +.+|.+|++..+ .....+....+ .-...+.+.+.++|.+.++..
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred EEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCC
Confidence 34444 22 467888877643 22222221122 234578899999988766653
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.64 E-value=16 Score=30.86 Aligned_cols=59 Identities=14% Similarity=-0.001 Sum_probs=40.3
Q ss_pred eEEEEecCCCcEEEEeecC------------CeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEe
Q psy10348 60 NELKFHPQDFNLLLSVSKD------------HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG 121 (291)
Q Consensus 60 ~~~~~~~~~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 121 (291)
--|+|+| .+.+++.-..+ ..+.+.+..+++..+.+. .....+++.++|+||++.|+..-
T Consensus 479 DNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~--~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 479 DGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV--GPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE--CCTTCEEEEEEECTTSSEEEEEE
T ss_pred cceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe--CCCCccCcCeeECCCCCEEEEEE
Confidence 4588999 77866653322 235556666676655553 23567999999999999887764
No 356
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=75.12 E-value=29 Score=27.45 Aligned_cols=146 Identities=10% Similarity=0.125 Sum_probs=83.1
Q ss_pred eEEEEccCCc--ceeEEEeee------ccceeEEEEe---cC---CCcEEEEee-cCCeEEEEECCCcceeeeecccc--
Q psy10348 37 VIRIFSPAFH--ACVRHFYGH------GHAINELKFH---PQ---DFNLLLSVS-KDHTLRLWNIKTDICIAIFGGVE-- 99 (291)
Q Consensus 37 ~i~vw~~~~~--~~~~~~~~~------~~~v~~~~~~---~~---~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~-- 99 (291)
+|.+||+.++ ++++++.-. ...+..+.+. |. +..+...+. ..+-|.|+|+.+++..+.+....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6889999999 888877532 3457778877 21 134444443 46779999999887666542100
Q ss_pred ---------CC----CCceEEEEEccC----CCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccC
Q psy10348 100 ---------GH----RDEVLSADFDLL----GTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHF 162 (291)
Q Consensus 100 ---------~~----~~~i~~~~~~~~----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
+. ...+..++++|+ ++.|+-....+ -++|.+.+.-+...- .....
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~-----------------~~~~v 265 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKG-----------------GKLNP 265 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTT-----------------CCCCC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcc-----------------hhhce
Confidence 00 246778888887 66776666543 455555443322110 00000
Q ss_pred cccccccccCcceeEEEEc---CCEEEEecCCCeEEEecCCC
Q psy10348 163 PQFSTRDIHRNYVDCVRWL---GDFVLSKSCENCIICWKPGR 201 (291)
Q Consensus 163 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~ 201 (291)
..+.. .+....-..++++ |.++++--..+.|..|+...
T Consensus 266 ~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 266 ELLGN-RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEE-CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeee-cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 00000 1111223344553 55777777789999999875
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=74.95 E-value=33 Score=27.99 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=23.2
Q ss_pred CceEEEEEccCCC-EEEEEecCCcEEEEecc
Q psy10348 103 DEVLSADFDLLGT-KIMSCGMDHSLKLWDLT 132 (291)
Q Consensus 103 ~~i~~~~~~~~~~-~l~~~~~d~~i~v~d~~ 132 (291)
...+.|+|.|+|. .|+++...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3457899999996 56667778999999743
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.72 E-value=2.6 Score=38.84 Aligned_cols=29 Identities=14% Similarity=0.014 Sum_probs=24.2
Q ss_pred EEecCCCcEEEEEcCCCcEEEEEcCCCCC
Q psy10348 232 FSMDYWQKILAVGNQSGRTYVWDLDVQDP 260 (291)
Q Consensus 232 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 260 (291)
.+..++..++++-+.|+++|+|++.++++
T Consensus 243 ~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 243 MIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 34445688999999999999999999864
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=71.84 E-value=30 Score=26.21 Aligned_cols=84 Identities=11% Similarity=0.064 Sum_probs=45.2
Q ss_pred CCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEEEeecC--------------CeEEEEECCCcceeeeeccccC
Q psy10348 35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD--------------HTLRLWNIKTDICIAIFGGVEG 100 (291)
Q Consensus 35 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--------------g~i~vwd~~~~~~~~~~~~~~~ 100 (291)
++.|...+.+ |.....+... . +--+++ ++..|+-.... ..|+..++..++..... .
T Consensus 36 ~~~ly~~~~d-g~~~~~l~~~--~--~~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~----~ 105 (302)
T 3s25_A 36 NGRLYAMNID-GSNIHKLSND--T--AMYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD----P 105 (302)
T ss_dssp TTEEEEEETT-SCSCEEEEEE--E--EEEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE----C
T ss_pred CceEEEEcCC-CCCCEEccCC--c--eeeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee----c
Confidence 5667777765 3334444422 2 234577 66666655432 35777777755433322 1
Q ss_pred CCCceEEEEEccCCCEEEEEe--cCC--cEEEEecc
Q psy10348 101 HRDEVLSADFDLLGTKIMSCG--MDH--SLKLWDLT 132 (291)
Q Consensus 101 ~~~~i~~~~~~~~~~~l~~~~--~d~--~i~v~d~~ 132 (291)
. . ...|+++++.|+-.. .++ .|...++.
T Consensus 106 ~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d 137 (302)
T 3s25_A 106 D--P--CIYASLIGNYIYYLHYDTQTATSLYRIRID 137 (302)
T ss_dssp S--C--EEEEEEETTEEEEEEESSSSCEEEEEEETT
T ss_pred C--C--ccEEEEeCCEEEEEeecCCCCceEEEEECC
Confidence 1 1 226778888888765 334 44445554
No 360
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=70.20 E-value=39 Score=26.83 Aligned_cols=214 Identities=11% Similarity=0.074 Sum_probs=99.7
Q ss_pred ceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-c-----e---eE--EEee-eccceeEEEEecCCCcEEEEeecC
Q psy10348 11 ENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-A-----C---VR--HFYG-HGHAINELKFHPQDFNLLLSVSKD 78 (291)
Q Consensus 11 ~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-~-----~---~~--~~~~-~~~~v~~~~~~~~~~~~l~s~~~d 78 (291)
..|..++..... .+|....++.|+.|-.... + . .. .+.. ....|..++... .+.+.-..|
T Consensus 68 ~~i~~va~G~~h-----t~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~---~h~~alt~~ 139 (406)
T 4d9s_A 68 HQIVSVTCGADH-----TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD---SHCLAVTME 139 (406)
T ss_dssp SCEEEEEECSSE-----EEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETT
T ss_pred CCEEEEEeCcce-----EEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEECh---hheEEEcCC
Confidence 456666655443 3444334458999954321 1 0 01 1111 112466665543 445555789
Q ss_pred CeEEEEECCCc-c----------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccC
Q psy10348 79 HTLRLWNIKTD-I----------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN 147 (291)
Q Consensus 79 g~i~vwd~~~~-~----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 147 (291)
|.|..|-.... + ....+. ......|..++.. ....+.-..||.|..|-......+..-.
T Consensus 140 G~v~~wG~n~~GqLG~g~~~~~~~p~~v~--~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~------ 209 (406)
T 4d9s_A 140 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQ--AFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGD------ 209 (406)
T ss_dssp SCEEEEECCTTSTTCSSSCCCEEEEEECG--GGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSS------
T ss_pred CcEEEeCCCCCccCCCCCCCCcccceEec--ccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCC------
Confidence 99999965421 1 011111 1112356666654 3355555679999999754322111000
Q ss_pred CCCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeec-CCccc
Q psy10348 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLN-FKDCE 226 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 226 (291)
... ...| ..........|..++....+.+.-..+|.|..|=.......-......... ...+. .....
T Consensus 210 -~~~--------~~~p-~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~-p~~v~~~~~~~ 278 (406)
T 4d9s_A 210 -RTD--------RLVP-ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSF 278 (406)
T ss_dssp -SCC--------EEEE-EECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEE-EEECGGGTTSC
T ss_pred -CCC--------cCcc-EEecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccc-cEEecccCCCC
Confidence 000 0000 000001223466666656666667789999999654432221111111111 11111 11122
Q ss_pred EEEEEEEecCCCcEEEEEcCCCcEEEEEcCC
Q psy10348 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDV 257 (291)
Q Consensus 227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 257 (291)
|. .++.. ....++-..||.|+.|-...
T Consensus 279 v~--~i~~G--~~hs~alt~~G~v~~wG~n~ 305 (406)
T 4d9s_A 279 IS--QISGG--WRHTMALTSDGKLYGWGWNK 305 (406)
T ss_dssp EE--EEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred EE--EEEec--CCEEEEEcCCCeEEEeeCCC
Confidence 33 33333 44555556789999997654
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.94 E-value=37 Score=28.60 Aligned_cols=62 Identities=11% Similarity=-0.028 Sum_probs=41.4
Q ss_pred ceeEEEEecCCCcEEEEeec------------CCeEEEEECCCcceeeeeccccCCCCceEEEEEccCCCEEEEEec
Q psy10348 58 AINELKFHPQDFNLLLSVSK------------DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM 122 (291)
Q Consensus 58 ~v~~~~~~~~~~~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 122 (291)
....|.|.+ +|.+.+.... ...|..++..+++....+. ......++.++|+||++.|+++-.
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~--~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV--GPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE--CCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe--CCCCccccCCEECCCCCEEEEEEe
Confidence 345688998 7777773221 1256667777777655541 123467999999999998887753
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.10 E-value=9.2 Score=33.05 Aligned_cols=28 Identities=14% Similarity=0.439 Sum_probs=24.6
Q ss_pred CCcEEEEeecCCeEEEEECCCcceeeee
Q psy10348 68 DFNLLLSVSKDHTLRLWNIKTDICIAIF 95 (291)
Q Consensus 68 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 95 (291)
+..++++-+.|+++|+|++++++++...
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 3479999999999999999999887765
No 363
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=68.48 E-value=41 Score=26.41 Aligned_cols=114 Identities=5% Similarity=-0.181 Sum_probs=56.4
Q ss_pred cceeEEEEeeeccCCCCCEEEEecCCC----eEEEEccCCcceeEEEee--------------eccceeEEEEecCC-Cc
Q psy10348 10 EENFYTCAWSMDLESGRPLLAVAGSRA----VIRIFSPAFHACVRHFYG--------------HGHAINELKFHPQD-FN 70 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~-~~ 70 (291)
...|.++++.|... ..|.+++..| .|...+ +.++.-..+.. ....|.++++.|.+ ..
T Consensus 54 ~~~v~~i~~dp~~~---~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 129 (394)
T 3b7f_A 54 GHTIHHIVQDPREP---ERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPG 129 (394)
T ss_dssp TSEEEEEEECSSST---TCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTT
T ss_pred CCceEEEEECCCCC---CeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCC
Confidence 46789999998321 2455555444 444432 22322111110 11257788888743 45
Q ss_pred EEEEeecCCeEEEEECCCcceeeeecccc----------------CCCCceEEEEEccC-CCEEEEEecCCcEEE
Q psy10348 71 LLLSVSKDHTLRLWNIKTDICIAIFGGVE----------------GHRDEVLSADFDLL-GTKIMSCGMDHSLKL 128 (291)
Q Consensus 71 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----------------~~~~~i~~~~~~~~-~~~l~~~~~d~~i~v 128 (291)
.+..+...+.|...+ ..++.-..+.... .....+.++.++|. ...++.+..++.|..
T Consensus 130 ~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 130 TWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp CEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEE
T ss_pred EEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEE
Confidence 666666666555443 2233222221100 12346889999884 345555554544433
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=66.23 E-value=27 Score=29.58 Aligned_cols=54 Identities=9% Similarity=0.106 Sum_probs=33.1
Q ss_pred EEecCCCcEEEEEcCC------------CcEEEEEcCCCCCCcceeEEEeccccccceeeeEEccCCceee
Q psy10348 232 FSMDYWQKILAVGNQS------------GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290 (291)
Q Consensus 232 ~~~~~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 290 (291)
+.++|.|.+++.-..+ ..+.+.+..+++ +...+.. .....++.++|+||++.|.
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~----~~rf~~~-P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE----IRRFMVG-PIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC----EEEEEEC-CTTCEEEEEEECTTSSEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe----EEEEEeC-CCCccCcCeeECCCCCEEE
Confidence 4556778866654432 234444544442 3344443 3457899999999999875
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=65.04 E-value=44 Score=25.48 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=74.5
Q ss_pred eeeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-------cceeEEEeeeccceeEEEEecCCCcEEEEeecC
Q psy10348 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-------HACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78 (291)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 78 (291)
.+..++.|.++...++.+ +..+++..+..|.++...+.. |.....+.. .+.+..+.... +...++..+.+
T Consensus 95 ~l~~~e~i~~~~~~~~~~-~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~-~~~~i~l~T~~ 171 (312)
T 1suu_A 95 NLGDQEEILTIKNSKDLT-DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF-KDEKVICLSKK 171 (312)
T ss_dssp CCCTTCCEEEEEEESCCC-TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC-TTCEEEEEETT
T ss_pred CCCCCCEEEEEEEeccCC-CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC-CCCEEEEEeCC
Confidence 344556676665443211 125788889999999887642 222222333 45566655554 45667778889
Q ss_pred CeEEEEECCCc-------ceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCc
Q psy10348 79 HTLRLWNIKTD-------ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP 134 (291)
Q Consensus 79 g~i~vwd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 134 (291)
|.+..+....- +-+..+. +. ....|..+..-.++..+++.+..|..+...+..-
T Consensus 172 G~~~r~~~~ev~~~gR~~~Gv~~i~-L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 172 GSAFIFNSRDVRLTNRGTQGVCGMK-LK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp SEEEEEEGGGSCBCCTTBCCEECCC-CC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred CcEEEEEHHHccccCCCCCCeEeEE-eC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 99988876531 1112221 12 2456666665555667888888999888887653
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=59.03 E-value=65 Score=25.47 Aligned_cols=193 Identities=10% Similarity=0.043 Sum_probs=92.0
Q ss_pred eEEEEECCCc--ceeeeecc---ccCCCCceEEEEEc---cC----CCEEEEEe-cCCcEEEEeccCchhhhhhcccccc
Q psy10348 80 TLRLWNIKTD--ICIAIFGG---VEGHRDEVLSADFD---LL----GTKIMSCG-MDHSLKLWDLTKPEIKDACAESYTF 146 (291)
Q Consensus 80 ~i~vwd~~~~--~~~~~~~~---~~~~~~~i~~~~~~---~~----~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 146 (291)
+|.+||+.++ +.++.+.- .......+..+.+. |. +.+++.+. ..+.|.|+|+.+++.-+.... .+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~--~~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHP--TF 201 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECG--GG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccC--CC
Confidence 5889999999 88876631 11234567888887 22 23444443 367899999999886654432 22
Q ss_pred CCCCccccccCccccCcccccccccCcceeEEEEcC------CEEEEecCCC-eEEEecCCCCCccccccCCCceeeeee
Q psy10348 147 NPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLG------DFVLSKSCEN-CIICWKPGRLEDKELRTNETNVTIINR 219 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~ 219 (291)
.|+. ...+.. .+ ..+. -...+..++.+. +.|+-....+ .+.--..+..+.... ....+.+..
T Consensus 202 ~pd~-~~~~~i-~G--~~~~----~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~---~~~v~~~G~ 270 (381)
T 3q6k_A 202 KAER-PTKFDY-GG--KEYE----FKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGG---KLNPELLGN 270 (381)
T ss_dssp SCCS-CEEEEE-TT--EEEE----ECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTC---CCCCEEEEE
T ss_pred cccc-CcceEE-CC--EEeE----eccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcch---hhceEEeee
Confidence 3321 000000 00 0000 123355555541 2232222221 222111100000000 111121221
Q ss_pred ecCCcccEEEEEEEec-CCCcEEEEEcCCCcEEEEEcCC-CCCCcceeEEEeccccccceeeeEEccCCcee
Q psy10348 220 LNFKDCEIWFIRFSMD-YWQKILAVGNQSGRTYVWDLDV-QDPSSIKFQILSHPRCMSAVRQTTLSKNGNVL 289 (291)
Q Consensus 220 ~~~~~~~i~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 289 (291)
. + .....+..+.+ .+|.++++--..+.|..|+..+ .-.......+.... --..+..+.+.++|.+.
T Consensus 271 k-g--~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lw 338 (381)
T 3q6k_A 271 R-G--KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLW 338 (381)
T ss_dssp C-C--TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEE
T ss_pred c-C--CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEE
Confidence 1 1 01223445665 5677777777889999999876 21111222222222 23456778887777643
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.02 E-value=59 Score=27.43 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=38.2
Q ss_pred eeEEEEeeeccCCCCCEEE-EecC-----------CCeEEEEccCCcceeEEEeee-ccceeEEEEecCCCcEEEEe
Q psy10348 12 NFYTCAWSMDLESGRPLLA-VAGS-----------RAVIRIFSPAFHACVRHFYGH-GHAINELKFHPQDFNLLLSV 75 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~-~~~~-----------dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~ 75 (291)
....+.|.+++. +.+ +=.. .+.+..++..++++...+... ...++.++|+| |++.|+++
T Consensus 477 sPDnL~fd~~G~----LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGR----LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCC----EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCceEECCCCC----EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEE
Confidence 345678888773 555 3211 226777787778866655543 35689999999 76766665
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=56.24 E-value=67 Score=24.73 Aligned_cols=124 Identities=12% Similarity=0.020 Sum_probs=75.7
Q ss_pred eeecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCc-------ceeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFH-------ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 79 (291)
+..++.|.++..-.+. ++..+++..+.+|.++.-.+..- .....++. .+.+..+.... ....|+..+.+|
T Consensus 91 l~~~e~i~~~~~~~~~-~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G 167 (327)
T 3uc1_A 91 FQPEERIAQVIQIRGY-TDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSANG 167 (327)
T ss_dssp CCTTCCEEEEEEESST-TSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEETTS
T ss_pred CCCCCEEEEEEEeccC-CCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEECCC
Confidence 4456677766554432 12259999999999998876432 11222333 34555555554 445677778889
Q ss_pred eEEEEECC--Ccce-------eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCch
Q psy10348 80 TLRLWNIK--TDIC-------IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135 (291)
Q Consensus 80 ~i~vwd~~--~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 135 (291)
.+..+... .-.. +..+ .+ .....|.++...+.+..++.++..|.++.-.+....
T Consensus 168 ~~~rf~~~~~eip~~gr~a~Gv~~i-~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 168 QSIRFSATDEALRPMGRATSGVQGM-RF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp EEEEEECCTTTSCCCCTTSBCEESS-CC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred eEEEEECcccccCcCCcCCCCeeee-cC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcc
Confidence 98887766 2111 1111 11 234567777666667789999999998888765443
No 369
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=54.27 E-value=37 Score=21.17 Aligned_cols=26 Identities=4% Similarity=-0.091 Sum_probs=14.9
Q ss_pred EEEEEccCCCEEEEEecCCcEEEEeccC
Q psy10348 106 LSADFDLLGTKIMSCGMDHSLKLWDLTK 133 (291)
Q Consensus 106 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 133 (291)
..+.+..+|.+++... ++.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 3466777777666533 4443 676544
No 370
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=52.27 E-value=86 Score=24.83 Aligned_cols=214 Identities=7% Similarity=0.048 Sum_probs=100.4
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCC-cce----------eEEEeee-ccceeEEEEecCCCcEEEEeecCC
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF-HAC----------VRHFYGH-GHAINELKFHPQDFNLLLSVSKDH 79 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~-~~~----------~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg 79 (291)
.|..++.... ..++-..+|.|+.|-... +++ ...+... ...|..++... .+.+.-..||
T Consensus 122 ~i~~ia~G~~------h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~---~hs~alt~~G 192 (406)
T 4d9s_A 122 RIKQIACGDS------HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA---EHTAAVTEDG 192 (406)
T ss_dssp CEEEEEECSS------EEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTS
T ss_pred CEEEEEEChh------heEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC---CeEEEEeCCC
Confidence 4555554432 444456789999996542 111 0111111 12455555543 4555556889
Q ss_pred eEEEEECCCcc-----------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCC
Q psy10348 80 TLRLWNIKTDI-----------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148 (291)
Q Consensus 80 ~i~vwd~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 148 (291)
.|..|-..... ....+. ......|..++.. ....+.-..+|.|..|-......+..-..
T Consensus 193 ~v~~wG~n~~GqlG~g~~~~~~~p~~v~--~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~------ 262 (406)
T 4d9s_A 193 DLYGWGWGRYGNLGLGDRTDRLVPERVT--STGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDL------ 262 (406)
T ss_dssp CEEEEECCTTSTTCSSSSCCEEEEEECC--CSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSC------
T ss_pred CEEEeeCCCCCCCCCCCCCCcCccEEec--ccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCC------
Confidence 99999643211 011110 1122456666553 23445556789999997544322110000
Q ss_pred CCccccccCccccCcccccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEE
Q psy10348 149 ARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIW 228 (291)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (291)
.....+ ..+. ......|..++--..+.+.-..||.|..|=.......-.........+..........
T Consensus 263 ~~~~~p--------~~v~--~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~-- 330 (406)
T 4d9s_A 263 EDHLIP--------HKLE--ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK-- 330 (406)
T ss_dssp CCEEEE--------EECG--GGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCC--
T ss_pred cCcccc--------EEec--ccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCc--
Confidence 000000 0000 0122346666665556666678999999965443222111111111111111111122
Q ss_pred EEEEEecCCCcEEEEEcCCCcEEEEEcCCC
Q psy10348 229 FIRFSMDYWQKILAVGNQSGRTYVWDLDVQ 258 (291)
Q Consensus 229 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 258 (291)
+..++.. ....++-..||.|+.|-....
T Consensus 331 v~~va~G--~~hs~alt~~G~v~~wG~n~~ 358 (406)
T 4d9s_A 331 VVQVSCG--WRHTLAVTERNNVFAWGRGTN 358 (406)
T ss_dssp EEEEEEC--SSEEEEEETTSCEEEEECCTT
T ss_pred EEEEEeC--CCeEEEEeCCCCEEEecCCCC
Confidence 3334433 445555567899999987643
No 371
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=47.87 E-value=1.5e+02 Score=26.21 Aligned_cols=64 Identities=8% Similarity=-0.094 Sum_probs=39.2
Q ss_pred ecceeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEee-------eccceeEEEEecCCCcEEEEee
Q psy10348 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYG-------HGHAINELKFHPQDFNLLLSVS 76 (291)
Q Consensus 9 ~~~~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~ 76 (291)
....|.+++++|... ..+++++..+.|...+ +.|+.-..+.. ....+.+|++.|.+...++.+.
T Consensus 13 ~~g~i~~i~~~p~~~---~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 13 GGGYITGIVAHPKTK---DLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp BCSCEEEEEECSSST---TCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEECCCCC---CEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 357899999999754 4667777667665554 22332222221 1246899999985555555554
No 372
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=44.39 E-value=1.1e+02 Score=26.28 Aligned_cols=58 Identities=5% Similarity=-0.020 Sum_probs=37.3
Q ss_pred cEEEEeecCCeEE-EEECCCcc-eeeeeccccCCCCceEEEEEccCC--CEEEEEecCCcEEE
Q psy10348 70 NLLLSVSKDHTLR-LWNIKTDI-CIAIFGGVEGHRDEVLSADFDLLG--TKIMSCGMDHSLKL 128 (291)
Q Consensus 70 ~~l~s~~~dg~i~-vwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~v 128 (291)
..++.|..+|.|. +-....+. .+..+.. .....+|..+.++++. ..|+.++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~-~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQL-FQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEEC-CTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecc-cCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4788889999864 33333222 1222211 2345788899999987 89999987776655
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=43.47 E-value=1.2e+02 Score=23.85 Aligned_cols=207 Identities=10% Similarity=0.004 Sum_probs=91.3
Q ss_pred EEEEecCCCeEEEEccCC-cc-------eeEEEe---e-eccceeEEEEecCCCcEEEEeecCCeEEEEECCCc-c----
Q psy10348 28 LLAVAGSRAVIRIFSPAF-HA-------CVRHFY---G-HGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD-I---- 90 (291)
Q Consensus 28 ~l~~~~~dg~i~vw~~~~-~~-------~~~~~~---~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~---- 90 (291)
.++.-..||.|..|-... ++ ...... . ....+..++.. ....+.-..||.|..|-.... +
T Consensus 12 ~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~~~~l~~~G~v~~wG~n~~GqLG~g 88 (389)
T 3kci_A 12 ENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGG---EQTLFAVTADGKLYATGYGAGGRLGIG 88 (389)
T ss_dssp ---------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTSSS
T ss_pred cceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeC---CCeEEEEcCCCcEEEEECCCCCCCCCC
Confidence 566667788888886543 11 111111 0 01234444433 345555567899999964321 1
Q ss_pred ------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCCccccccCccccCcc
Q psy10348 91 ------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQ 164 (291)
Q Consensus 91 ------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
....+. ......+..++.+.-....+.-..||.|..|-....-.+..-... ....| ..
T Consensus 89 ~~~~~~~p~~v~--~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~------~~~~p--------~~ 152 (389)
T 3kci_A 89 GTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDRP--------RV 152 (389)
T ss_dssp SSCCEEEEEECG--GGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCC------CEEEE--------EE
T ss_pred CcCCccCCEEcc--cccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCc------cCcCC--------eE
Confidence 111111 112234455566555566677778999999975443221100000 00000 00
Q ss_pred cccccccCcceeEEEEcCCEEEEecCCCeEEEecCCCCCccccccCCCceeeeeeecCCcccEEEEEEEecCCCcEEEEE
Q psy10348 165 FSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVG 244 (291)
Q Consensus 165 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 244 (291)
+.. .....|..++....+.+.-..||.|..|=.......-.........+.......... ++.++........+.-
T Consensus 153 v~~--l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~--v~~ia~G~g~~~t~~l 228 (389)
T 3kci_A 153 IES--LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--VVDIACGSGDAQTLCL 228 (389)
T ss_dssp CGG--GTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSC--EEEEEECCSSCEEEEE
T ss_pred ecc--cCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCe--EEEEEEcCCCcEEEEE
Confidence 000 012346677766667677778999999965432221111111111111111111122 3333332212455666
Q ss_pred cCCCcEEEEEcCC
Q psy10348 245 NQSGRTYVWDLDV 257 (291)
Q Consensus 245 ~~dg~i~vwd~~~ 257 (291)
..||.|..|-...
T Consensus 229 ~~~G~v~~wG~n~ 241 (389)
T 3kci_A 229 TDDDTVWSWGDGD 241 (389)
T ss_dssp ETTTEEEEEECCG
T ss_pred ccCCEEEEEeCCC
Confidence 7789999997653
No 374
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=39.84 E-value=1.4e+02 Score=25.04 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=37.6
Q ss_pred EEEEEEEecCCCcEEEEEcCCCcEEEEEcCCCCCCcceeEEEecccccccee-eeEEccCCceee
Q psy10348 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR-QTTLSKNGNVLL 290 (291)
Q Consensus 227 i~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~ 290 (291)
.+.+......+-..++.|+.+|.|.=..+............+.......+|. .+.+++++.+|.
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Ly 466 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLY 466 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEE
Confidence 4444444444456788999999887666654321101222222222345785 899999888764
No 375
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=39.71 E-value=1.2e+02 Score=22.67 Aligned_cols=164 Identities=9% Similarity=0.005 Sum_probs=0.0
Q ss_pred eeecceeEEEEeeec-cCCCCCEEEEecCCCeEEEEccCC------cceeEEEeeeccceeEEEEecCCCcEEEEeecCC
Q psy10348 7 LLIEENFYTCAWSMD-LESGRPLLAVAGSRAVIRIFSPAF------HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79 (291)
Q Consensus 7 ~~~~~~i~~~~~s~~-~~~~~~~l~~~~~dg~i~vw~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 79 (291)
+..++.|..+.. .+ .+ .+++..+.+|.++...+.. +.....++ -.+.+..+.... +...++..+.+|
T Consensus 64 l~~~e~i~~v~~-~~~~~---~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~-~~~~ill~T~~G 137 (276)
T 3no0_A 64 KSREEKIVGAFI-REKFG---NRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSV-DETHILLFTKKG 137 (276)
T ss_dssp SSTTCCEEEEEE-GGGSC---SEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECC-SSCEEEEEETTS
T ss_pred CCCCCEEEEEEC-CcCCC---CEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeC-CCCEEEEEECCC
Q ss_pred eEEEEECC---------CcceeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEEeccCchhhhhhccccccCCCC
Q psy10348 80 TLRLWNIK---------TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPAR 150 (291)
Q Consensus 80 ~i~vwd~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 150 (291)
.+..+... .|.....+ .....|..+...+++..++..+..|.++...+....
T Consensus 138 ~~~r~~~~eip~~gR~a~Gv~~i~L----~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~--------------- 198 (276)
T 3no0_A 138 RVARFSVREVPPSTPGARGVQGIKL----EKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIP--------------- 198 (276)
T ss_dssp EEEEEEGGGSCBCCTTCCCEECCCC----CTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSC---------------
T ss_pred EEEEEEhhhCCCcCCCCCCEEEEcc----CCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcc---------------
Q ss_pred ccccccCccccCcccccccccCcceeEEEEc-CCEEEEecCCCeEEE--ecCCC
Q psy10348 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCENCIIC--WKPGR 201 (291)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~i--wd~~~ 201 (291)
.................-+...... .+.++..+.+|.+.. ++...
T Consensus 199 ------~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 199 ------KTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ------CCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred ------cCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=39.34 E-value=1.4e+02 Score=23.38 Aligned_cols=101 Identities=12% Similarity=-0.059 Sum_probs=51.8
Q ss_pred CEEEEecCCCeEEEEccCC-cceeEEEe--eeccceeEEEEecCCCcEEEEeecCC----eEEEEECCCcceeeeecc--
Q psy10348 27 PLLAVAGSRAVIRIFSPAF-HACVRHFY--GHGHAINELKFHPQDFNLLLSVSKDH----TLRLWNIKTDICIAIFGG-- 97 (291)
Q Consensus 27 ~~l~~~~~dg~i~vw~~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~-- 97 (291)
..|.+|+..| +.+++... ++.-..+. .....|.+|++.|.+...|..+...| .|... ...++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 4777788777 55555432 22222221 12356999999985555566665555 34333 233332222210
Q ss_pred -ccC--------CCCceEEEEEccC--CCEEEEEecCCcEEEE
Q psy10348 98 -VEG--------HRDEVLSADFDLL--GTKIMSCGMDHSLKLW 129 (291)
Q Consensus 98 -~~~--------~~~~i~~~~~~~~--~~~l~~~~~d~~i~v~ 129 (291)
+.. ....|.++++.|. ...+..++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 011 1235788999873 4566666656655544
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=36.00 E-value=1.3e+02 Score=24.90 Aligned_cols=69 Identities=3% Similarity=-0.002 Sum_probs=41.4
Q ss_pred eeEEEEecC-----CCcEEEEeecCCeEEEEEC-CCcc-------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCc
Q psy10348 59 INELKFHPQ-----DFNLLLSVSKDHTLRLWNI-KTDI-------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125 (291)
Q Consensus 59 v~~~~~~~~-----~~~~l~s~~~dg~i~vwd~-~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 125 (291)
.++|+.... +-..+..|..+|.|.=.-+ ..+. .+..+.. .....+|..+.++++..+|+.++.++.
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v-~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTV-FREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECC-SSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEee-cCCCCccceEEEcCCCCEEEEEECCeE
Confidence 456555431 2346777888987643322 2211 1222211 124578999999999999999998876
Q ss_pred EEE
Q psy10348 126 LKL 128 (291)
Q Consensus 126 i~v 128 (291)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 378
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=34.64 E-value=1.5e+02 Score=24.38 Aligned_cols=71 Identities=7% Similarity=-0.004 Sum_probs=43.0
Q ss_pred eeEEEEeeeccCC--CCCEEEEecCCCeEEEEcc-CCc-------ceeEEEee--eccceeEEEEecCCCcEEEEeecCC
Q psy10348 12 NFYTCAWSMDLES--GRPLLAVAGSRAVIRIFSP-AFH-------ACVRHFYG--HGHAINELKFHPQDFNLLLSVSKDH 79 (291)
Q Consensus 12 ~i~~~~~s~~~~~--~~~~l~~~~~dg~i~vw~~-~~~-------~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg 79 (291)
..++++...-... +-..+..|..+|.|.=.-+ ..+ ..+..++. ...+|..|.+++ +..+|+.++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCe
Confidence 4677766543111 1137888888987643322 221 12333432 357899999999 778899988887
Q ss_pred eEEE
Q psy10348 80 TLRL 83 (291)
Q Consensus 80 ~i~v 83 (291)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 379
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=33.61 E-value=1.8e+02 Score=25.10 Aligned_cols=55 Identities=9% Similarity=0.104 Sum_probs=35.7
Q ss_pred EEEEecCCCeEE-EEccCCcc-------eeEEEe--eeccceeEEEEecCCCcEEEEeecCCeEEE
Q psy10348 28 LLAVAGSRAVIR-IFSPAFHA-------CVRHFY--GHGHAINELKFHPQDFNLLLSVSKDHTLRL 83 (291)
Q Consensus 28 ~l~~~~~dg~i~-vw~~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 83 (291)
.+..|..+|.|. +.....+. .+..++ ....+|..|.+++ +...|+.++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~-~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEET-TTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcC-CCCEEEEEECCEEEEE
Confidence 678888898875 32221111 222222 2456899999999 7889999988876655
No 380
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=33.50 E-value=48 Score=22.99 Aligned_cols=37 Identities=8% Similarity=0.119 Sum_probs=26.4
Q ss_pred ccceeEEEEecCCCcEEEEeecCCeEEEEECCCccee
Q psy10348 56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92 (291)
Q Consensus 56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 92 (291)
..-+.++.|......-+++.+.+|++.++|.+-|+..
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 3445566776644456777778999999999877643
No 381
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=27.65 E-value=3.2e+02 Score=24.11 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=39.6
Q ss_pred ccceeEEEEecCCCcEEEEeecCCeEEEEECCCcceeeeeccccC----CCCceEEEEEccCC-CEEEEEe
Q psy10348 56 GHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEG----HRDEVLSADFDLLG-TKIMSCG 121 (291)
Q Consensus 56 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~-~~l~~~~ 121 (291)
.+.|.+|+++|.+...++.+...+.|...+ ..|+.-..+..... ....+.+++++|.. ..++.+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 468999999997677788888777665554 33443333311011 23469999999853 3444443
No 382
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=27.33 E-value=2.3e+02 Score=24.04 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=43.2
Q ss_pred cceeEEEEeeeccCCCC---CEEEEecCCCeEEEE-ccCCc----c-eeEEEe--eeccceeEEEEecCCCcEEEEeecC
Q psy10348 10 EENFYTCAWSMDLESGR---PLLAVAGSRAVIRIF-SPAFH----A-CVRHFY--GHGHAINELKFHPQDFNLLLSVSKD 78 (291)
Q Consensus 10 ~~~i~~~~~s~~~~~~~---~~l~~~~~dg~i~vw-~~~~~----~-~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d 78 (291)
+...+.++...-...++ ..+..|+.+|.|.-. ....+ . .+..++ ....+|..|.+++ +...|+.++.+
T Consensus 361 ~~~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~-~~~~LyV~s~~ 439 (590)
T 3nvq_A 361 KYHYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDA-ERRKLYVSSQW 439 (590)
T ss_dssp SSCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEET-TTTEEEEECSS
T ss_pred CCcEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcC-CCCEEEEEecc
Confidence 34566666543221122 377888889987633 22222 1 122232 2356899999999 77888888877
Q ss_pred CeEEE
Q psy10348 79 HTLRL 83 (291)
Q Consensus 79 g~i~v 83 (291)
+.++|
T Consensus 440 ~V~qV 444 (590)
T 3nvq_A 440 EVSQV 444 (590)
T ss_dssp EEEEE
T ss_pred eEEEc
Confidence 76665
No 383
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.67 E-value=1.3e+02 Score=25.14 Aligned_cols=69 Identities=7% Similarity=0.089 Sum_probs=41.8
Q ss_pred eeEEEEec-CCCcEEEEeecCCeEEEEECCCcc----eeeeeccccCCCCceE-EEEEccCCCEEEEEecCCcEEE
Q psy10348 59 INELKFHP-QDFNLLLSVSKDHTLRLWNIKTDI----CIAIFGGVEGHRDEVL-SADFDLLGTKIMSCGMDHSLKL 128 (291)
Q Consensus 59 v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d~~i~v 128 (291)
.++|+... .+...++.|..+|.|.=..+..+. .+..+. +.....+|. .+.+++++.+|+.++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~-v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVS-VFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEE-CCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEE-eecCCCccccceEEccCCCeEEEEecccccee
Confidence 45555443 134567788999987544443221 222221 122356785 8999999999999987765554
No 384
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.13 E-value=3.4e+02 Score=23.63 Aligned_cols=70 Identities=7% Similarity=0.115 Sum_probs=39.0
Q ss_pred EEE-eeeccCCCCCEEEEe-c----CCCeEEEEccCCcceeEE-Ee-eecc------ceeEEEEecCCCcEEEEe-----
Q psy10348 15 TCA-WSMDLESGRPLLAVA-G----SRAVIRIFSPAFHACVRH-FY-GHGH------AINELKFHPQDFNLLLSV----- 75 (291)
Q Consensus 15 ~~~-~s~~~~~~~~~l~~~-~----~dg~i~vw~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~~l~s~----- 75 (291)
.+. ++|+++ +++.+ + .-..++++|+++++.+.. +. .-+. ....++|.. +..++++.
T Consensus 133 g~~~~~~~~~----~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 133 GVSNCFQNPN----RYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKN 207 (711)
T ss_dssp EEEECSSSTT----EEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTT
T ss_pred ceeecCCCCC----EEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCCC
Confidence 444 777774 55543 2 224799999999987631 11 0000 113458875 54555542
Q ss_pred -----ecCCeEEEEECCCc
Q psy10348 76 -----SKDHTLRLWNIKTD 89 (291)
Q Consensus 76 -----~~dg~i~vwd~~~~ 89 (291)
+....|+.|.+-+.
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~ 226 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGES 226 (711)
T ss_dssp CBCTTSSBCEEEEEETTSC
T ss_pred CcCcCCCCCEEEEEECCCC
Confidence 12356888887654
No 385
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=24.80 E-value=2.7e+02 Score=24.07 Aligned_cols=58 Identities=5% Similarity=0.055 Sum_probs=37.0
Q ss_pred cEEEEeecCCeEE-EEECCCcc-------eeeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEE
Q psy10348 70 NLLLSVSKDHTLR-LWNIKTDI-------CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128 (291)
Q Consensus 70 ~~l~s~~~dg~i~-vwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v 128 (291)
..++.|..+|.|. +.....+. .+..+. ......+|..+.++++.+.|+.++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~-v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMT-VFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEE-CSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEe-ecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677788898864 33222111 111121 1245678999999999999999998876665
No 386
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=24.43 E-value=2.7e+02 Score=23.63 Aligned_cols=59 Identities=8% Similarity=-0.045 Sum_probs=37.3
Q ss_pred cEEEEeecCCeEEEEEC-CCcc---e--eeeeccccCCCCceEEEEEccCCCEEEEEecCCcEEEE
Q psy10348 70 NLLLSVSKDHTLRLWNI-KTDI---C--IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129 (291)
Q Consensus 70 ~~l~s~~~dg~i~vwd~-~~~~---~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~v~ 129 (291)
..+..|..+|.|.-.-+ ..+. . +..+. +.....+|..+.++++...|+.++.++.+++-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~-~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQ-PFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEEC-CCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEee-ccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 46777888888653322 2221 1 11221 11345789999999999999999887766653
No 387
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=23.76 E-value=2.4e+02 Score=21.27 Aligned_cols=103 Identities=7% Similarity=0.024 Sum_probs=57.0
Q ss_pred EEeeeccCCCCCEEEEec----CCCeEEEEccCCcceeEEEeeeccceeEEEEecCCCcEEE-EeecCCeEEEEECCCcc
Q psy10348 16 CAWSMDLESGRPLLAVAG----SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSKDHTLRLWNIKTDI 90 (291)
Q Consensus 16 ~~~s~~~~~~~~~l~~~~----~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~ 90 (291)
..|+++++ .|+-.. ....|...+++. .....+..+.. .+|++ +++.|+ +......|.+-++..+.
T Consensus 109 ~~~s~~g~----~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 109 IYASLIGN----YIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp EEEEEETT----EEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTE
T ss_pred cEEEEeCC----EEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCC
Confidence 36788774 666554 345666666653 33444543322 45677 445554 54446778888887655
Q ss_pred eeeeeccccCCCCceEEEEEccCCCEEEEEecCC--cEEEEeccCch
Q psy10348 91 CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH--SLKLWDLTKPE 135 (291)
Q Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~ 135 (291)
....+ .+ ... ..+.|++.+|+-...++ .|..-++....
T Consensus 179 ~~~l~---~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 179 EALFY---DC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp EEEEE---CS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred EEEEe---CC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 44333 22 222 23568898887766543 45555555443
No 388
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=22.14 E-value=3.9e+02 Score=23.25 Aligned_cols=61 Identities=11% Similarity=0.064 Sum_probs=37.1
Q ss_pred eeEEEEeeeccCCCCCEEEEecCCCeEEEEccCCcceeEEEeee-------ccceeEEEEecCCCcEEEEee
Q psy10348 12 NFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGH-------GHAINELKFHPQDFNLLLSVS 76 (291)
Q Consensus 12 ~i~~~~~s~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~ 76 (291)
.|..++++|... ..+.++...|.|...+- .++.-..+..+ ...|.+|++.|.+.+.++.+.
T Consensus 24 ~i~~i~~~p~~~---~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEK---DLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSST---TCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCC---CEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 899999999853 36666766666665542 23322222211 245889999985555555543
No 389
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=20.22 E-value=3.9e+02 Score=22.53 Aligned_cols=71 Identities=4% Similarity=0.062 Sum_probs=43.2
Q ss_pred eeEEEEecC-----CCcEEEEeecCCeEE-EEECCCc-------ceeeeeccccC--------CCCceEEEEEccCCCEE
Q psy10348 59 INELKFHPQ-----DFNLLLSVSKDHTLR-LWNIKTD-------ICIAIFGGVEG--------HRDEVLSADFDLLGTKI 117 (291)
Q Consensus 59 v~~~~~~~~-----~~~~l~s~~~dg~i~-vwd~~~~-------~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l 117 (291)
.+.|+.... .-..++.|..+|.|. +...... ..+..+..+.. ...+|..+.++++...|
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~L 484 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSL 484 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEE
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEE
Confidence 466776541 235778899999874 4332211 11112211111 24678899999999999
Q ss_pred EEEecCCcEEEE
Q psy10348 118 MSCGMDHSLKLW 129 (291)
Q Consensus 118 ~~~~~d~~i~v~ 129 (291)
+.++.++.+++-
T Consensus 485 YV~s~~~V~qVP 496 (565)
T 3oky_B 485 YVAFSTCVIKVP 496 (565)
T ss_dssp EEECSSCEEEEE
T ss_pred EEEecCeEEEee
Confidence 999988877663
Done!