Your job contains 1 sequence.
>psy10348
MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAIN
ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC
GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW
LGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI
LAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10348
(291 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6AZS2 - symbol:eed-b "Polycomb protein eed-B" ... 1059 4.4e-107 1
UNIPROTKB|F1P0V7 - symbol:EED "Polycomb protein EED" spec... 1054 1.5e-106 1
UNIPROTKB|Q5ZKH3 - symbol:EED "Polycomb protein EED" spec... 1054 1.5e-106 1
UNIPROTKB|Q28DT7 - symbol:eed "Polycomb protein eed" spec... 1054 1.5e-106 1
ZFIN|ZDB-GENE-050417-287 - symbol:eed "embryonic ectoderm... 1054 1.5e-106 1
UNIPROTKB|Q8UUP2 - symbol:eed-a "Polycomb protein eed-A" ... 1053 1.9e-106 1
UNIPROTKB|Q3SZ25 - symbol:EED "Polycomb protein EED" spec... 1044 1.7e-105 1
UNIPROTKB|F1PP86 - symbol:EED "Uncharacterized protein" s... 1044 1.7e-105 1
UNIPROTKB|O75530 - symbol:EED "Polycomb protein EED" spec... 1044 1.7e-105 1
MGI|MGI:95286 - symbol:Eed "embryonic ectoderm developmen... 1044 1.7e-105 1
RGD|1309782 - symbol:Eed "embryonic ectoderm development"... 1044 1.7e-105 1
FB|FBgn0032391 - symbol:escl "escl" species:7227 "Drosoph... 993 4.4e-100 1
UNIPROTKB|Q26458 - symbol:esc "Polycomb protein esc" spec... 865 1.6e-86 1
FB|FBgn0000588 - symbol:esc "extra sexcombs" species:7227... 863 2.6e-86 1
TAIR|locus:2091876 - symbol:FIE "AT3G20740" species:3702 ... 527 1.1e-50 1
UNIPROTKB|E9PMU3 - symbol:EED "Polycomb protein EED" spec... 266 4.8e-23 1
WB|WBGene00003224 - symbol:mes-6 species:6239 "Caenorhabd... 188 1.9e-12 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 174 7.9e-11 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 154 8.7e-11 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 154 8.7e-11 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 172 1.4e-10 1
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 164 2.1e-10 2
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 164 2.1e-10 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 169 3.1e-10 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 151 2.7e-08 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 139 3.3e-08 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 151 3.9e-08 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 151 3.9e-08 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 151 3.9e-08 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 151 3.9e-08 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 151 3.9e-08 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 151 3.9e-08 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 151 3.9e-08 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 151 3.9e-08 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 151 3.9e-08 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 139 4.8e-08 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 139 4.8e-08 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 139 4.8e-08 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 139 4.8e-08 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 139 4.8e-08 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 150 5.3e-08 1
CGD|CAL0005179 - symbol:orf19.5410 species:5476 "Candida ... 140 5.8e-08 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 139 6.1e-08 2
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 145 6.2e-08 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 148 8.6e-08 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 148 8.6e-08 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 149 8.8e-08 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 142 1.1e-07 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 134 1.1e-07 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 147 1.1e-07 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 146 1.5e-07 1
DICTYBASE|DDB_G0283635 - symbol:wdr89 "WD40 repeat-contai... 144 1.9e-07 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 151 1.9e-07 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 146 1.9e-07 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 147 2.1e-07 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 147 2.1e-07 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 138 2.9e-07 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 146 3.0e-07 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 134 3.1e-07 2
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 145 3.5e-07 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 145 3.5e-07 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 145 3.7e-07 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 146 4.3e-07 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 144 4.5e-07 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 120 5.4e-07 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 144 5.5e-07 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 142 5.5e-07 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 142 6.3e-07 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 142 7.1e-07 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 140 8.0e-07 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 140 8.5e-07 1
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 145 9.1e-07 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 121 9.2e-07 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 140 9.4e-07 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 131 9.8e-07 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 131 1.1e-06 1
UNIPROTKB|O95170 - symbol:CDRT1 "CMT1A duplicated region ... 142 1.1e-06 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 141 1.1e-06 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 144 1.2e-06 1
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 142 1.4e-06 1
UNIPROTKB|H0Y626 - symbol:H0Y626 "Uncharacterized protein... 142 1.5e-06 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 138 1.6e-06 1
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 139 1.8e-06 1
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 139 1.8e-06 1
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 142 2.0e-06 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 136 2.0e-06 1
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 138 2.2e-06 1
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 136 2.2e-06 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 138 2.3e-06 1
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 141 2.4e-06 1
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 141 2.4e-06 1
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 141 2.6e-06 1
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 139 2.6e-06 1
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 141 2.6e-06 1
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 141 2.6e-06 1
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 141 2.6e-06 1
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 141 2.6e-06 1
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 141 2.6e-06 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 135 2.6e-06 1
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 135 2.8e-06 1
WARNING: Descriptions of 251 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q6AZS2 [details] [associations]
symbol:eed-b "Polycomb protein eed-B" species:8355 "Xenopus
laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
HOVERGEN:HBG052708 KO:K11462 EMBL:BM179864 EMBL:AY034136
EMBL:AF460180 EMBL:AF375048 EMBL:BC077425 RefSeq:NP_001082354.1
UniGene:Xl.4736 ProteinModelPortal:Q6AZS2 SMR:Q6AZS2 GeneID:398420
KEGG:xla:398420 CTD:398420 Xenbase:XB-GENE-491484 Uniprot:Q6AZS2
Length = 438
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 182/283 (64%), Positives = 232/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ +K A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 261 RINSLRMKTAIKESYDYNPNKTNRPFVSQKVHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED ++++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 321 CENAIVCWKPGKMEDDIEKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L++P+C SA+RQT+ S++ +VL+
Sbjct: 381 GKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSVLI 423
>UNIPROTKB|F1P0V7 [details] [associations]
symbol:EED "Polycomb protein EED" species:9031 "Gallus
gallus" [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042054 "histone
methyltransferase activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0045120 "pronucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 GeneTree:ENSGT00510000047334 OMA:CTTLTHP
GO:GO:0001739 EMBL:AADN02004576 IPI:IPI00593157
Ensembl:ENSGALT00000001824 ArrayExpress:F1P0V7 Uniprot:F1P0V7
Length = 464
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 179/283 (63%), Positives = 232/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 167 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 226
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 227 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 286
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 287 RINSKRMINAIKESYEYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 346
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 347 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 406
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+++DP K L+HP+C++A+RQT+ S++ ++L+
Sbjct: 407 GKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILI 449
>UNIPROTKB|Q5ZKH3 [details] [associations]
symbol:EED "Polycomb protein EED" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006351 GO:GO:0003682 GO:GO:0035098 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OrthoDB:EOG4001J7
GO:GO:0001739 EMBL:AJ720111 IPI:IPI00586997 RefSeq:NP_001026547.1
UniGene:Gga.8810 ProteinModelPortal:Q5ZKH3 SMR:Q5ZKH3 STRING:Q5ZKH3
Ensembl:ENSGALT00000022764 GeneID:426381 KEGG:gga:426381
InParanoid:Q5ZKH3 NextBio:20827995 ArrayExpress:Q5ZKH3
Uniprot:Q5ZKH3
Length = 446
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 179/283 (63%), Positives = 232/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 149 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 208
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 209 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 268
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 269 RINSKRMINAIKESYEYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 328
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 329 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 388
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+++DP K L+HP+C++A+RQT+ S++ ++L+
Sbjct: 389 GKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILI 431
>UNIPROTKB|Q28DT7 [details] [associations]
symbol:eed "Polycomb protein eed" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 HOVERGEN:HBG052708 KO:K11462 CTD:8726
HOGENOM:HOG000005759 EMBL:CR848605 RefSeq:NP_001017325.1
UniGene:Str.46642 ProteinModelPortal:Q28DT7 SMR:Q28DT7
STRING:Q28DT7 GeneID:550079 KEGG:xtr:550079 Xenbase:XB-GENE-491480
Bgee:Q28DT7 Uniprot:Q28DT7
Length = 438
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 181/283 (63%), Positives = 231/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ +K A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 261 RINSLRMKTAIRESYEYNPNKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 321 CENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L++P+C SA+RQT+ S++ ++L+
Sbjct: 381 GKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSILV 423
>ZFIN|ZDB-GENE-050417-287 [details] [associations]
symbol:eed "embryonic ectoderm development"
species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-287
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OrthoDB:EOG4001J7
EMBL:BC093351 EMBL:BC153556 IPI:IPI00570338 RefSeq:NP_001017766.1
UniGene:Dr.83484 ProteinModelPortal:Q566T0 SMR:Q566T0 STRING:Q566T0
Ensembl:ENSDART00000059345 GeneID:550463 KEGG:dre:550463
InParanoid:Q566T0 NextBio:20879707 Bgee:Q566T0 Uniprot:Q566T0
Length = 443
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 185/283 (65%), Positives = 228/283 (80%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D S PLLAVAGSR +IRI + CV+H+ GHG+AINELKFHP+D
Sbjct: 146 DENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAINELKFHPRDP 205
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSADFDLLG KIMSCGMDHSLKLW
Sbjct: 206 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADFDLLGEKIMSCGMDHSLKLW 265
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
L ++ A SY +NP+++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 266 RLDSERLQRAIRGSYEYNPSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 325
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPGR+ED ++ NE+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 326 CENAIVCWKPGRMEDDIDRIKPNESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 385
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L+ PRC SA+RQT+ S++ ++L+
Sbjct: 386 GKLYVWDLEVEDPHKAKCTTLTLPRCTSAIRQTSFSRDSSILI 428
>UNIPROTKB|Q8UUP2 [details] [associations]
symbol:eed-a "Polycomb protein eed-A" species:8355 "Xenopus
laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
EMBL:AJ421945 EMBL:BC077511 EMBL:BC097778 RefSeq:NP_001089517.1
UniGene:Xl.5897 ProteinModelPortal:Q8UUP2 SMR:Q8UUP2 GeneID:734571
KEGG:xla:734571 CTD:734571 Xenbase:XB-GENE-6255887
HOVERGEN:HBG052708 KO:K11462 Uniprot:Q8UUP2
Length = 438
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 181/283 (63%), Positives = 231/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 141 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 200
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 201 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 260
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ +K A ESY +NP+++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 261 RINSLRMKTAIKESYEYNPSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 320
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 321 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 380
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+ +DP K L++P+C SAVRQT+ S++ ++L+
Sbjct: 381 GKLYVWDLEAEDPHKAKCTTLTYPKCASAVRQTSFSRDSSILV 423
>UNIPROTKB|Q3SZ25 [details] [associations]
symbol:EED "Polycomb protein EED" species:9913 "Bos taurus"
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0045120
"pronucleus" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042054 "histone methyltransferase activity"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682
GO:GO:0035098 GO:GO:0042054 GO:GO:0006349 GO:GO:0045120
HOVERGEN:HBG052708 KO:K11462 EMBL:BC103217 IPI:IPI00760407
RefSeq:NP_001035584.1 UniGene:Bt.49104 ProteinModelPortal:Q3SZ25
SMR:Q3SZ25 STRING:Q3SZ25 Ensembl:ENSBTAT00000010324 GeneID:404183
KEGG:bta:404183 CTD:8726 GeneTree:ENSGT00510000047334
HOGENOM:HOG000005759 InParanoid:Q3SZ25 OMA:CTTLTHP
OrthoDB:EOG4001J7 NextBio:20817612 ArrayExpress:Q3SZ25
GO:GO:0001739 Uniprot:Q3SZ25
Length = 441
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 179/283 (63%), Positives = 230/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L+H +C +A+RQT+ S++ ++L+
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426
>UNIPROTKB|F1PP86 [details] [associations]
symbol:EED "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045120 "pronucleus" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0042054
"histone methyltransferase activity" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 KO:K11462 CTD:8726 GeneTree:ENSGT00510000047334
OMA:CTTLTHP GO:GO:0001739 EMBL:AAEX03012752 RefSeq:XP_857750.1
ProteinModelPortal:F1PP86 Ensembl:ENSCAFT00000007206 GeneID:476779
KEGG:cfa:476779 Uniprot:F1PP86
Length = 441
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 179/283 (63%), Positives = 230/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L+H +C +A+RQT+ S++ ++L+
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426
>UNIPROTKB|O75530 [details] [associations]
symbol:EED "Polycomb protein EED" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IEA] [GO:0045120 "pronucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0045892 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471076
GO:GO:0006351 GO:GO:0003682 GO:GO:0035098 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 HOVERGEN:HBG052708 KO:K11462 CTD:8726
OMA:CTTLTHP OrthoDB:EOG4001J7 GO:GO:0001739 EMBL:AF080227
EMBL:AF070418 EMBL:U90651 EMBL:AF099032 EMBL:AK292120 EMBL:AP003084
EMBL:BC047672 EMBL:BC068995 EMBL:AF078933 IPI:IPI00171248
IPI:IPI00395515 IPI:IPI00432040 RefSeq:NP_003788.2
RefSeq:NP_694536.1 UniGene:Hs.503510 PDB:3IIW PDB:3IIY PDB:3IJ0
PDB:3IJ1 PDB:3IJC PDB:3JPX PDB:3JZG PDB:3JZH PDB:3JZN PDB:3K26
PDB:3K27 PDBsum:3IIW PDBsum:3IIY PDBsum:3IJ0 PDBsum:3IJ1
PDBsum:3IJC PDBsum:3JPX PDBsum:3JZG PDBsum:3JZH PDBsum:3JZN
PDBsum:3K26 PDBsum:3K27 ProteinModelPortal:O75530 SMR:O75530
DIP:DIP-36673N IntAct:O75530 STRING:O75530 PhosphoSite:O75530
PaxDb:O75530 PRIDE:O75530 DNASU:8726 Ensembl:ENST00000263360
Ensembl:ENST00000327320 Ensembl:ENST00000351625 GeneID:8726
KEGG:hsa:8726 UCSC:uc001pbp.3 UCSC:uc001pbr.3 GeneCards:GC11P085955
HGNC:HGNC:3188 MIM:605984 neXtProt:NX_O75530 PharmGKB:PA27624
ChiTaRS:EED EvolutionaryTrace:O75530 GenomeRNAi:8726 NextBio:32733
ArrayExpress:O75530 Bgee:O75530 CleanEx:HS_EED
Genevestigator:O75530 Uniprot:O75530
Length = 441
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 179/283 (63%), Positives = 230/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L+H +C +A+RQT+ S++ ++L+
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426
>MGI|MGI:95286 [details] [associations]
symbol:Eed "embryonic ectoderm development" species:10090 "Mus
musculus" [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016571
"histone methylation" evidence=IMP] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042054 "histone methyltransferase activity"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0045120 "pronucleus" evidence=IDA] [GO:0061087 "positive
regulation of histone H3-K27 methylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:95286 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0003682 GO:GO:0035098 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 GO:GO:0016571 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OMA:CTTLTHP
OrthoDB:EOG4001J7 GO:GO:0001739 EMBL:U78103 EMBL:U97675
EMBL:AK077664 EMBL:AK131976 EMBL:AK133890 EMBL:BC012966
IPI:IPI00312600 IPI:IPI00900431 IPI:IPI00900437 RefSeq:NP_068676.1
UniGene:Mm.380914 PDB:2QXV PDBsum:2QXV ProteinModelPortal:Q921E6
SMR:Q921E6 DIP:DIP-29523N IntAct:Q921E6 STRING:Q921E6
PhosphoSite:Q921E6 PaxDb:Q921E6 PRIDE:Q921E6
Ensembl:ENSMUST00000107234 GeneID:13626 KEGG:mmu:13626
UCSC:uc009igk.2 InParanoid:Q921E6 EvolutionaryTrace:Q921E6
NextBio:284300 Bgee:Q921E6 Genevestigator:Q921E6 Uniprot:Q921E6
Length = 441
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 179/283 (63%), Positives = 230/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 144 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 203
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 204 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 263
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 264 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 323
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 324 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 383
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L+H +C +A+RQT+ S++ ++L+
Sbjct: 384 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 426
>RGD|1309782 [details] [associations]
symbol:Eed "embryonic ectoderm development" species:10116
"Rattus norvegicus" [GO:0001739 "sex chromatin" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IEA;ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042054 "histone methyltransferase activity"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0045120 "pronucleus" evidence=IEA;ISO]
[GO:0061087 "positive regulation of histone H3-K27 methylation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1309782 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 GeneTree:ENSGT00510000047334
GO:GO:0001739 IPI:IPI00869787 Ensembl:ENSRNOT00000024082
UCSC:RGD:1309782 ArrayExpress:F1LMC5 Uniprot:F1LMC5
Length = 500
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 179/283 (63%), Positives = 230/283 (81%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ENFYTCAW+ D + PLLAVAGSR +IRI +P C++H+ GHG+AINELKFHP+D
Sbjct: 203 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP 262
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NLLLSVSKDH LRLWNI+TD +AIFGGVEGHRDEVLSAD+DLLG KIMSCGMDHSLKLW
Sbjct: 263 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 322
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
+ + +A ESY +NP ++ RPF +QK HFP FSTRDIHRNYVDCVRWLGD +LSKS
Sbjct: 323 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKS 382
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG++ED +++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ
Sbjct: 383 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 442
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVWDL+V+DP K L+H +C +A+RQT+ S++ ++L+
Sbjct: 443 GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 485
>FB|FBgn0032391 [details] [associations]
symbol:escl "escl" species:7227 "Drosophila melanogaster"
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0070734 "histone
H3-K27 methylation" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035098
GO:GO:0070734 GeneTree:ENSGT00510000047334 OMA:CTTLTHP
FlyBase:FBgn0032391 NextBio:789307 EMBL:BT015954 RefSeq:NP_723702.1
UniGene:Dm.21544 SMR:Q9VKD5 STRING:Q9VKD5
EnsemblMetazoa:FBtr0080286 GeneID:34611 KEGG:dme:Dmel_CG5202
UCSC:CG5202-RA CTD:34611 InParanoid:Q9VKD5 GenomeRNAi:34611
Uniprot:Q9VKD5
Length = 462
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 175/284 (61%), Positives = 221/284 (77%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+E+FYTCAWS D +G P+LA AG R VIRIF+P H C +++ GHGHAINELKFHP
Sbjct: 165 DESFYTCAWSYDSVTGDPVLAAAGYRGVIRIFNPVKHQCSKNYIGHGHAINELKFHPTRP 224
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
LLLS SKDH+LRLWNI++D+C+A+FGGVEGHRDEVLS DFDL G +IMS GMDHSLKLW
Sbjct: 225 QLLLSGSKDHSLRLWNIQSDVCVAVFGGVEGHRDEVLSVDFDLRGDRIMSSGMDHSLKLW 284
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
L KP+IK+A S F+P ++T PF T KEHFP FSTRDIHRNYVDCV+W GDFV SKS
Sbjct: 285 RLDKPDIKEAIELSSGFSPNKNTGPFPTIKEHFPDFSTRDIHRNYVDCVQWFGDFVFSKS 344
Query: 190 CENCIICWKPGRLEDK--ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG+L + E++ E+ T+++ ++K CEIWF+RF+ + WQKILA+GNQ
Sbjct: 345 CENSIVCWKPGKLSESWHEIKPQESATTVLHHFDYKMCEIWFVRFAFNAWQKILALGNQL 404
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
G T+VW+LD DP+ K L HP+ S +RQT+ SK+G++L+C
Sbjct: 405 GTTFVWELDCNDPNLTKCSQLVHPKSNSTIRQTSFSKDGSILVC 448
>UNIPROTKB|Q26458 [details] [associations]
symbol:esc "Polycomb protein esc" species:7244 "Drosophila
virilis" [GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0007275 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006351 GO:GO:0000790 GO:GO:0048096 OrthoDB:EOG4C5B0H
EMBL:S80985 EMBL:S80982 EMBL:S80983 EMBL:S80984
ProteinModelPortal:Q26458 SMR:Q26458 STRING:Q26458
FlyBase:FBgn0013917 InParanoid:Q26458 Uniprot:Q26458
Length = 425
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 156/283 (55%), Positives = 202/283 (71%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+E FYTCAWS DL++ PLLA AG R VIR+ + V ++ GHG AINELKFHP
Sbjct: 124 DEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINELKFHPHKL 183
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
LLLS SKDH +RLWNI+T +CIAIFGGVEGHRDEVLS DF++ G +I+S GMDHSLKLW
Sbjct: 184 QLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLW 243
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
L E + S TF+ +ST PF T +HFP FSTRDIHRNYVDCV+W G+FVLSKS
Sbjct: 244 CLNTQEFQHKIELSQTFSQEKSTLPFPTITKHFPDFSTRDIHRNYVDCVQWFGNFVLSKS 303
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG+L ++L+ ++++ TII + +CEIWF+RF + WQK++A+GNQ
Sbjct: 304 CENAIVCWKPGQLHQSFEQLKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQ 363
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVW++D DP L + R ++ VRQ S++ +VL+
Sbjct: 364 GKVYVWEMDPSDPEGAHMTTLHNLRSVATVRQIAFSRDASVLV 406
>FB|FBgn0000588 [details] [associations]
symbol:esc "extra sexcombs" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=ISS;NAS;IPI] [GO:0016458 "gene
silencing" evidence=IGI;ISS;IMP] [GO:0046974 "histone
methyltransferase activity (H3-K9 specific)" evidence=IC]
[GO:0046976 "histone methyltransferase activity (H3-K27 specific)"
evidence=IC;IMP] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0016571 "histone methylation" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031491 "nucleosome binding" evidence=IDA] [GO:0031062
"positive regulation of histone methylation" evidence=IDA]
[GO:0008047 "enzyme activator activity" evidence=IDA] [GO:0035097
"histone methyltransferase complex" evidence=IDA] [GO:0042054
"histone methyltransferase activity" evidence=IDA] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048666 "neuron
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0070734 "histone H3-K27 methylation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0000790 GO:GO:0048813 GO:GO:0007517 GO:GO:0035098
GO:GO:0006342 GO:GO:0051567 GO:GO:0008047 GO:GO:0048096
GO:GO:0031062 GO:GO:0070734 KO:K11462 GeneTree:ENSGT00510000047334
EMBL:L41867 EMBL:AY069796 PIR:S58672 RefSeq:NP_477431.1
UniGene:Dm.1948 ProteinModelPortal:Q24338 SMR:Q24338 DIP:DIP-20069N
IntAct:Q24338 MINT:MINT-266724 STRING:Q24338 PaxDb:Q24338
PRIDE:Q24338 EnsemblMetazoa:FBtr0080325 GeneID:34595
KEGG:dme:Dmel_CG14941 CTD:34595 FlyBase:FBgn0000588
InParanoid:Q24338 OMA:DECEIWF OrthoDB:EOG4C5B0H PhylomeDB:Q24338
GenomeRNAi:34595 NextBio:789223 Bgee:Q24338 GermOnline:CG14941
Uniprot:Q24338
Length = 425
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 155/283 (54%), Positives = 201/283 (71%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+E FYTCAWS DL++ PLLA AG R VIR+ + V ++ GHG AINELKFHP
Sbjct: 124 DEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKL 183
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
LLLS SKDH +RLWNI++ +CIAI GGVEGHRDEVLS DF++ G +I+S GMDHSLKLW
Sbjct: 184 QLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLW 243
Query: 130 DLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
L PE S TF+ +ST PF T +HFP FSTRDIHRNYVDCV+W G+FVLSKS
Sbjct: 244 CLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKS 303
Query: 190 CENCIICWKPGRLED--KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQS 247
CEN I+CWKPG+L ++++ ++++ TII + +CEIWF+RF + WQK++A+GNQ
Sbjct: 304 CENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQ 363
Query: 248 GRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
G+ YVW+LD DP L + R ++ VRQ S++ +VL+
Sbjct: 364 GKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSRDASVLV 406
>TAIR|locus:2091876 [details] [associations]
symbol:FIE "AT3G20740" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043078 "polar nucleus" evidence=IDA] [GO:2000014
"regulation of endosperm development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000003 "reproduction" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting"
evidence=RCA;IMP] [GO:0016571 "histone methylation"
evidence=RCA;IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007275 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0006351 GO:GO:0043078 GO:GO:0006349
GO:GO:2000014 GO:GO:0016571 KO:K11462 HOGENOM:HOG000005759
OMA:CTTLTHP EMBL:AB025629 EMBL:AF129516 EMBL:AK117114 EMBL:BT005326
IPI:IPI00544225 RefSeq:NP_188710.1 UniGene:At.20884
UniGene:At.74826 ProteinModelPortal:Q9LT47 SMR:Q9LT47
DIP:DIP-31378N IntAct:Q9LT47 STRING:Q9LT47 PaxDb:Q9LT47
PRIDE:Q9LT47 EnsemblPlants:AT3G20740.1 GeneID:821622
KEGG:ath:AT3G20740 GeneFarm:2279 TAIR:At3g20740 eggNOG:NOG275229
InParanoid:Q9LT47 PhylomeDB:Q9LT47 ProtClustDB:CLSN2685055
Genevestigator:Q9LT47 GermOnline:AT3G20740 Uniprot:Q9LT47
Length = 369
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 112/282 (39%), Positives = 161/282 (57%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
EE+FYT +W+ + +G P +A G + +IR+ + GHG ++NE++ P
Sbjct: 83 EESFYTVSWACGV-NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKP 141
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKL 128
L+++ SKD ++RLWN++T ICI IF G GHR EVLS DF + SCGMD ++K+
Sbjct: 142 QLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKI 201
Query: 129 WDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSK 188
W + E +S+T+ S F T+ FP F T IH NYVDC RW GDF+LSK
Sbjct: 202 WSMK--EFWTYVEKSFTWTDDPSK--FPTKFVQFPVF-TASIHTNYVDCNRWFGDFILSK 256
Query: 189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSG 248
S +N I+ W+P + KE E ++ R C+IWFI+FS D +A+GNQ G
Sbjct: 257 SVDNEILLWEP---QLKENSPGEGASDVLLRYPVPMCDIWFIKFSCDLHLSSVAIGNQEG 313
Query: 249 RTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
+ YVWDL P + LSH + S +RQT +S +G+ +L
Sbjct: 314 KVYVWDLKSCPP--VLITKLSHNQSKSVIRQTAMSVDGSTIL 353
>UNIPROTKB|E9PMU3 [details] [associations]
symbol:EED "Polycomb protein EED" species:9606 "Homo
sapiens" [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0016571
"histone methylation" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003682
GO:GO:0006349 GO:GO:0045120 GO:GO:0016571 GO:GO:0001739
EMBL:AP003084 HGNC:HGNC:3188 ChiTaRS:EED IPI:IPI00978431
ProteinModelPortal:E9PMU3 SMR:E9PMU3 Ensembl:ENST00000527888
ArrayExpress:E9PMU3 Bgee:E9PMU3 Uniprot:E9PMU3
Length = 106
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 43/87 (49%), Positives = 69/87 (79%)
Query: 204 DKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSI 263
DK ++ +E+NVTI+ R ++ C+IW++RFSMD+WQK+LA+GNQ G+ YVWDL+V+DP
Sbjct: 6 DK-IKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 64
Query: 264 KFQILSHPRCMSAVRQTTLSKNGNVLL 290
K L+H +C +A+RQT+ S++ ++L+
Sbjct: 65 KCTTLTHHKCGAAIRQTSFSRDSSILI 91
>WB|WBGene00003224 [details] [associations]
symbol:mes-6 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0000786 "nucleosome"
evidence=IDA] [GO:0031519 "PcG protein complex" evidence=IPI]
[GO:0016571 "histone methylation" evidence=IDA] [GO:0070734
"histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0006915
GO:GO:0002119 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0000003 GO:GO:0006351 GO:GO:0040027
GO:GO:0000786 GO:GO:0031519 GO:GO:0070734 EMBL:AF016224
EMBL:FO080478 KO:K11462 GeneTree:ENSGT00510000047334
eggNOG:NOG275229 RefSeq:NP_001021320.1 ProteinModelPortal:Q9GYS1
SMR:Q9GYS1 MINT:MINT-197423 STRING:Q9GYS1 PaxDb:Q9GYS1
EnsemblMetazoa:C09G4.5 GeneID:177657 KEGG:cel:CELE_C09G4.5
UCSC:C09G4.5 CTD:177657 WormBase:C09G4.5 HOGENOM:HOG000020629
InParanoid:Q9GYS1 OMA:RRRWLVC NextBio:897800 Uniprot:Q9GYS1
Length = 459
Score = 188 (71.2 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 10 EENFYTCAWSMDL---ESGR-PLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKF 64
EE+ +T W D E+ R P V G I + G IN+++
Sbjct: 97 EESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLSNRLRSVGWEINDIRT 156
Query: 65 HPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH 124
P + NL++ S D ++R+ +I+ + C+ + GG+E H +LS D+ G I+SCG DH
Sbjct: 157 CPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVDWSTDGDFILSCGFDH 216
Query: 125 SLKLWDLTKPEIKD 138
L WDL+ ++K+
Sbjct: 217 QLMEWDLSVKQVKE 230
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 72/281 (25%), Positives = 117/281 (41%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYG-HGHAINELKFH-PQDFNLLLSVSKDHTLRLWN 85
L+ A S IRI AC+ G HA L D + +LS DH L W+
Sbjct: 163 LIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVDWSTDGDFILSCGFDHQLMEWD 222
Query: 86 IKT-DICIAIFGGVEG-HRDE--VLSADFDLLGTKIMSCG-MDHSLKLWDLTKPEIKDAC 140
+ + + + H+D+ VL+ D+ +S G M S ++ E +D
Sbjct: 223 LSVKQVKEHLERACKALHQDKINVLTQSQDI---PYVSKGTMRKSAVSRNIPDKE-EDQL 278
Query: 141 AESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-G-DFVLSKSC--ENCIIC 196
E + RP + P + D+H +YVDC+R+L G ++ LSK C E I
Sbjct: 279 LELHR---ELIPRPSCLLPIYTPSSVSTDMHSDYVDCIRFLIGTNYALSKGCGNEKAIHF 335
Query: 197 WK---P-GRLEDK---ELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGR 249
W+ P G +E++ + ++ T +N WFI+F++D ++ L G G
Sbjct: 336 WRFGPPKGEVENRIHGNVLRPKSCTTKFRTMNVPSGSAWFIKFAVDPRRRWLVCGGAGGS 395
Query: 250 TYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLL 290
+DL + ++ R VRQ + S G L+
Sbjct: 396 VMFFDLRNNEETNPTHTCSVGSR---TVRQASFSTCGRFLV 433
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 174 (66.3 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 37/102 (36%), Positives = 58/102 (56%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+A A + RIFS A CV GH I+++ F+PQ N LL+ S D T R+W+ +
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQG-NRLLTGSSDKTARIWDAQ 375
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T C+ + +EGH DE+ S F+ G I++ D++ ++W
Sbjct: 376 TGQCLQV---LEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 39 RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV 98
+++S C F GH I L F+PQ L+ + S D T +LW+I++ +F +
Sbjct: 160 KLWSVETGKCYHTFRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQSGE--EVFT-L 215
Query: 99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
GH E++S F+ G +I++ DH++ +W+
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 154 (59.3 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 46/197 (23%), Positives = 91/197 (46%)
Query: 48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
C+R +GH H ++ + P +++ S S+D T+++W ++T C+ F GHR+ V
Sbjct: 13 CIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTF---TGHREWVRM 68
Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167
+ GT I SC D ++++W + E K E S P ++ + +
Sbjct: 69 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP-ESSYSSISEATG 127
Query: 168 RDI-HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKE-LRTNETNVTIINRLNFK 223
++ H N+V V + G F+LS + + + W ++K ++T + + L+F
Sbjct: 128 SEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMKTLNAHEHFVTSLDFH 184
Query: 224 DCEIWFIRFSMDYWQKI 240
+ + S+D K+
Sbjct: 185 KTAPYVVTGSVDQTVKV 201
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 154 (59.3 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 46/197 (23%), Positives = 91/197 (46%)
Query: 48 CVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLS 107
C+R +GH H ++ + P +++ S S+D T+++W ++T C+ F GHR+ V
Sbjct: 16 CIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTF---TGHREWVRM 71
Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST 167
+ GT I SC D ++++W + E K E S P ++ + +
Sbjct: 72 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP-ESSYSSISEATG 130
Query: 168 RDI-HRNYVDCVRWL--GDFVLSKSCENCIICWKPGRLEDKE-LRTNETNVTIINRLNFK 223
++ H N+V V + G F+LS + + + W ++K ++T + + L+F
Sbjct: 131 SEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMKTLNAHEHFVTSLDFH 187
Query: 224 DCEIWFIRFSMDYWQKI 240
+ + S+D K+
Sbjct: 188 KTAPYVVTGSVDQTVKV 204
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+A A + RIFS A C+ GH I+++ F+PQ N LL+ S D T R+W+ +
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQG-NHLLTGSSDKTARIWDAQ 375
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T C+ + +EGH DE+ S F+ G +++ D++ ++W
Sbjct: 376 TGQCLQV---LEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 39 RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV 98
+++S C F GH I L F+PQ L+ + S D T +LW+I+ + +
Sbjct: 160 KLWSVETGKCYHTFRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQNGEEVYT---L 215
Query: 99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPEIK---DACAE--SYTFN 147
GH E++S F+ G +I++ DH++ +WD T ++ CAE S +FN
Sbjct: 216 RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN 270
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 164 (62.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 23 ESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81
+ G LLA S I+++ P+ +A +R GH H+++ ++F + N L+S S+D TL
Sbjct: 167 QKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTL 226
Query: 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA 139
R+W++ T C+ + +S FD G ++S G D ++ +W+++ E K A
Sbjct: 227 RIWDVSTGFCVKVIKSATESWIRDVSPSFD--GKWLVSGGRDQAITVWEVSSAEPKAA 282
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW 180
++ + ++ R +D +E + H ++V C+RW
Sbjct: 365 FSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRW 401
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 164 (62.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 23 ESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81
+ G LLA S I+++ P+ +A +R GH H+++ ++F + N L+S S+D TL
Sbjct: 167 QKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTL 226
Query: 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA 139
R+W++ T C+ + +S FD G ++S G D ++ +W+++ E K A
Sbjct: 227 RIWDVSTGFCVKVIKSATESWIRDVSPSFD--GKWLVSGGRDQAITVWEVSSAEPKAA 282
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 144 YTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRW 180
++ + ++ R +D +E + H ++V C+RW
Sbjct: 365 FSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRW 401
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 32/102 (31%), Positives = 58/102 (56%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+A A + R+++ C+ GH I+++ F+PQ N LL+ S D T R+W+++
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQG-NRLLTGSSDKTARIWDVQ 375
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T C+ + +EGH DE+ S F+ G +++ D+S ++W
Sbjct: 376 TGQCLQV---LEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 39 RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV 98
+++S C F GH I L F+PQ ++ + S D T +LW+I++ + +
Sbjct: 160 KLWSAETGKCYHTFRGHTAEIVCLSFNPQS-TVVATGSMDTTAKLWDIQSGEEVVT---L 215
Query: 99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
GH E++S FD G +I++ DH++ +WD
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWD 247
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 151 (58.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 92 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 148
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 149 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 204
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 41 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 96
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 97 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 157 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 214
Query: 215 TIIN 218
I+
Sbjct: 215 ECIS 218
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 296
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 297 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 139 (54.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 68 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 122
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 123 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Score = 118 (46.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 34 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 92
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 93 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 175
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 176 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 227
Score = 47 (21.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 200 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 249
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 250 S-GSEDNLVYIWNLQTKE 266
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVEDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 94 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 118
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 119 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 202 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 253
Score = 47 (21.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 226 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 275
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 276 S-GSEDNLVYIWNLQTKE 292
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 94 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 118
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 119 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 202 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 253
Score = 47 (21.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 226 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 275
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 276 S-GSEDNLVYIWNLQTKE 292
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 94 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 118
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 119 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 202 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 253
Score = 47 (21.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 226 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 275
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 276 S-GSEDNLVYIWNLQTKE 292
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 94 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 118
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 119 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 202 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 253
Score = 47 (21.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 226 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 275
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 276 S-GSEDNLVYIWNLQTKE 292
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 94 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 118
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 119 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 202 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 253
Score = 47 (21.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 226 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 275
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 276 S-GSEDNLVYIWNLQTKE 292
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + IN +KFHP F+L++S S+D T+++W+ ++ ++GH + V DFD
Sbjct: 104 GHRNCINSVKFHPS-FSLMVSASEDATIKVWDFESG---EFERTLKGHTNAVQDIDFDKT 159
Query: 114 GTKIMSCGMDHSLKLWD 130
G + SC D ++KLWD
Sbjct: 160 GNLLASCSADLTIKLWD 176
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D + LLA + I+++ + CV+ +GH H ++ ++F P + L+S S+D
Sbjct: 154 IDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG-DQLISSSRDK 212
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
T+++W T CI + GH D V G+ I SC D ++K W++ K E
Sbjct: 213 TIKVWEAATGYCIKT---LVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGE 265
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/100 (34%), Positives = 50/100 (50%)
Query: 33 GSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC 91
GSR I+I+ A C+ + GH + + ++FHP LLSV D T+R+W+I C
Sbjct: 322 GSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCG-KFLLSVGDDKTIRVWDIAQGRC 380
Query: 92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
I E H + DF L I + G+D +K+W L
Sbjct: 381 IKTIN--EAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 16 CAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV 75
C S+ L+ A A I+++ R GH +A+ ++ F NLL S
Sbjct: 108 CINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG-NLLASC 166
Query: 76 SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
S D T++LW+ +T C+ + GH V F G +++S D ++K+W+
Sbjct: 167 SADLTIKLWDFQTYDCVKT---LHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 140 (54.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 34/102 (33%), Positives = 57/102 (55%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA S I+I+ F+ +R GH H ++ ++F P D ++L SVS+D +R+W+I
Sbjct: 182 LATCSSDLTIKIWDEKFNH-IRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDIFQ 240
Query: 89 DICIAIF-GGVEGHRD-EVLSADFDLLGTKIMSCGMDHSLKL 128
I + F G E RD +++S+D G +++C D S +L
Sbjct: 241 GISLKSFVGHSEWCRDLDIISSD--TYGDFVLTCSNDQSARL 280
Score = 51 (23.0 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 34/127 (26%), Positives = 50/127 (39%)
Query: 110 FDLLGTKI-MSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168
++ LG K ++ D+++KLW + P T P R P +
Sbjct: 338 YNQLGFKYCITASRDNTIKLWLIPPP----------TIAPHRPPLPSKYNNSQSWLIAEL 387
Query: 169 DIHRNYVD--CVRWLGDFVLSKSCENCIICWKPGRLEDKELRTNETNV--TIINRLNFKD 224
H ++V CV G F++S S + I W L L T NV TII F +
Sbjct: 388 KGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDLSGL----LETGYVNVVKTIIGHDGFIN 443
Query: 225 CEIWFIR 231
+I F R
Sbjct: 444 -DIDFAR 449
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 139 (54.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D LL A ++I+ + C++ GH + + F+PQ NL++S S
Sbjct: 94 AWSSDSN----LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGS 148
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 149 FDESVRIWDVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 118 (46.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + +I+I+ + GH I+++ + D NLL+S S D TL++W++ +
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSS 118
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ ++GH + V +F+ I+S D S+++WD+
Sbjct: 119 GKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 202 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 253
Score = 46 (21.3 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T + N K C F FS+ + I+
Sbjct: 226 GKYILAATLDNTLKLWDYSK--GKCLKTYTCHK------NEKYCI--FANFSVTGGKWIV 275
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 276 S-GSEDNLVYIWNLQTKE 292
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 145 (56.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
+M + LLA G +R++ H HF G ++ + FHP LLL S +
Sbjct: 111 TMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAA 170
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D T+R+W+++ C+A+ + H V S F G ++S G D +WDL
Sbjct: 171 DATIRMWSLQDQSCLAV---MTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 221
Score = 51 (23.0 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 167 TRDIHRNYV---DCVRWLGDFVLSKSCENCIICWK 198
T D H + V C R L D L+ + ++C+I WK
Sbjct: 599 TLDAHEDKVWGLHCSR-LDDRALTGASDSCVILWK 632
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 148 (57.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D SG+ LLA + I+++ C+R +GH H ++ + P +++ S ++D
Sbjct: 157 SFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 130 (50.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 54/184 (29%), Positives = 82/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHS 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNP--------AR--STRPFDT 157
G + SC D ++KLWD E I+ D S P AR + + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDYKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 148 (57.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D +G+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HTGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W ++T C+ F GHR+ V + GT I SC D ++++W + E K
Sbjct: 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHT 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPA----------RSTRPFDT 157
G + SC D ++KLWD E I+ D S P ++ + ++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 158 QKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNV 214
Q + + T HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 QTGYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 215 TIIN 218
I+
Sbjct: 280 ECIS 283
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + FH +LS + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 362 LRVWDFKNKRCMKT---LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 149 (57.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + LL A I+++S + Y H H + KF P D L++S S+D
Sbjct: 107 SVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 165
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ C+ F G + V DF+ GT I S G DH++K+WD+
Sbjct: 166 KTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPNGTCIASAGSDHAVKIWDI 215
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D +A A + ++S HA + GH + L+F PQ NLL S S+D
Sbjct: 23 SADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG-NLLASASRD 81
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+RLW + + F + H V S DF G +++ D S+K+W +
Sbjct: 82 RTVRLWVLDRKGKSSEF---KAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+E AWS D + L+ A I+I+ V+ GH + + F+PQ
Sbjct: 88 KEGISDIAWSQDSK----LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQS- 142
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
NL++S S D +R+W++ T C + + H D V F+ GT ++S D ++++W
Sbjct: 143 NLIVSGSFDENVRIWDVNTGECTKM---ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Query: 130 DLTKPEI 136
D T ++
Sbjct: 200 DTTTGQL 206
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G FVL+ + +N + W K L+T N K C F FS+ K +
Sbjct: 227 GKFVLAGTLDNTLRLWSYNN-NKKCLKT------YTGHKNEKYCI--FSTFSVTCG-KWI 276
Query: 242 AVGNQSGRTYVWDLDVQD 259
G++ Y+++L ++
Sbjct: 277 VTGSEDNLIYIYNLQTRE 294
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 134 (52.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + + A+I I+ C + YGH I+++ + D + L+S S D TL++W++++
Sbjct: 54 LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS-SDSSRLVSASDDKTLKVWDMRS 112
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPEIKDACAES 143
C+ ++GH D V DF+ I+S D S+K+W++ T +K A S
Sbjct: 113 GKCLKT---LKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHS 165
Score = 125 (49.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D S R L A ++++ C++ GH + F+P NL++S S
Sbjct: 88 AWSSD--SSR--LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS-NLIVSGS 142
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++++W +KT C+ + H D + + +F+ G+ I+S D ++WD
Sbjct: 143 FDESVKIWEVKTGKCLKT---LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 29 LAVAGSR-AVIRIFSPAFHACVRHFYGHGHA-INELKFHPQDFNLLLSVSKDHTLRLWNI 86
L V+GS + RI+ A C+R G+ ++ +KF P +L+ + D+TL+LW+
Sbjct: 179 LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNG-KYILTATLDNTLKLWDY 237
Query: 87 KTDICIAIFGGVEGHRDE--VLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEI 136
C+ + GH++E L A F + G K ++S D+ + +W+L EI
Sbjct: 238 SRGRCLKTY---TGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEI 287
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W R + L+T N K C F FS+ +K +
Sbjct: 220 GKYILTATLDNTLKLWDYSR--GRCLKT------YTGHKNEKYC--LFASFSVT-GRKWV 268
Query: 242 AVGNQSGRTYVWDLDVQD 259
G++ Y+W+L ++
Sbjct: 269 VSGSEDNMVYIWNLQTKE 286
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+A A + R+FS C+ GH I+++ F+ Q + +L+ S D T R+W +K
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQG-SRVLTASVDKTSRVWCVK 375
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T C+ + +EGH DE+ S F+ G I++ D++ ++W
Sbjct: 376 TGACLQV---LEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D ++G+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-QTGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W + T C+ F GHR+ V + GT + SC D ++++W + E K
Sbjct: 214 KTMKMWEVATGYCVKTF---TGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECK 269
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/182 (29%), Positives = 77/182 (42%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F+L++S S+D T+++W+ + ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSLMVSASEDATIKVWDYEAG---DFERTLKGHTDSVQDISFDQT 161
Query: 114 GTKIMSCGMDHSLKLWDLTKPE-IK-----DACAESYTFNPAR----STRPFDTQK--EH 161
G + SC D ++KLWD E I+ D S P S T K E
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Query: 162 FPQFSTRDI--HRNYVDCVRWLGDFVLSKSCEN--CIICWKPGRLEDK-ELRTNETNVTI 216
+ + HR +V VR D L SC N + W E K ELR +E V
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 217 IN 218
I+
Sbjct: 282 IS 283
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 19 SMDLESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
S + +SG+P ++GSR I+++ + C+ GH + + + FHP ++S +
Sbjct: 299 SENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGG-RFVVSCA 357
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D TLR+W+ K C+ + H V S DF +++ +D ++K+W+
Sbjct: 358 DDKTLRIWDYKNKRCMKT---LSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
>DICTYBASE|DDB_G0283635 [details] [associations]
symbol:wdr89 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0283635 EMBL:AAFI02000056 GenomeReviews:CM000153_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 RefSeq:XP_638928.1
ProteinModelPortal:Q54QU5 STRING:Q54QU5 EnsemblProtists:DDB0267166
GeneID:8624167 KEGG:ddi:DDB_G0283635 OMA:INAEDSI Uniprot:Q54QU5
Length = 359
Score = 144 (55.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 48/147 (32%), Positives = 72/147 (48%)
Query: 15 TCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLS 74
TC + +DL LLA AGS +I+I+ + + + GH AINE KF ++ N LLS
Sbjct: 27 TC-YVLDLSVTPNLLAAAGSNYLIKIYDRSNNTILNVLSGHKDAINETKFI-ENTNTLLS 84
Query: 75 VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TK 133
S D T+++W+ KT C + E+ S D L I++ G+ + L++L TK
Sbjct: 85 CSSDKTVKIWDTKTGQCSQTIN----QQGEIFSID---LNGDILAMGVGSMVVLYNLSTK 137
Query: 134 PEI-KDACAESYTFNPARSTRPFDTQK 159
I K C+ + R P D K
Sbjct: 138 KMIRKFDCSHTEDVTRVRF-HPIDKNK 163
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 45/163 (27%), Positives = 74/163 (45%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +PL G I+++S C+ GH I + FH D ++S S D
Sbjct: 58 SVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFH-HDLPWIISCSDD 116
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
T+R+WN + IA + GH V+SA F I+S +D ++++WD++ K
Sbjct: 117 QTIRIWNWQNRQEIAC---LTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKH 173
Query: 139 ACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL 181
+ P S R F+ Q + Q +DI N V+++
Sbjct: 174 SA-------PTSSVRAFEDQLQR-QQLPQQDIFGNINAVVKYV 208
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + LA A I++++ + Y H H + KF P D L++S S+D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 165
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ C+ F G + V DF+ GT I S G DH++K+WD+
Sbjct: 166 KTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPNGTCIASAGSDHTVKIWDI 215
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 61/217 (28%), Positives = 89/217 (41%)
Query: 50 RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
R+F GH AI + F P L + S D L LWN K F V GH+D V S
Sbjct: 12 RYFKGHKAAITSVDFSPSG-KQLATASWDTFLMLWNCKPQA--RAFRYV-GHKDVVTSVQ 67
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFST-R 168
F LG + S D +++LW + K + +++T P RS F + S +
Sbjct: 68 FSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTA-PVRSV-DFSADGQFLATASEDK 124
Query: 169 DIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRL-----EDKELRT-NETNVTIINRLNF 222
I + R+L C GRL EDK ++ + TN +N NF
Sbjct: 125 SIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN--NF 182
Query: 223 KDCEIWFIRFSMDYWQKILAVGNQ-SGRTY-VWDLDV 257
D + F F +D+ + + S T +WD+ V
Sbjct: 183 SD-SVGFANF-VDFNPNGTCIASAGSDHTVKIWDIRV 217
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFH 65
++L + + Y W +D+ A A R++S +R + GH ++ +KFH
Sbjct: 373 TVLYQGHAYP-VWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 431
Query: 66 PQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125
P N L + S D T+RLW+ + + +F GHR VLS F G + S G D
Sbjct: 432 PNS-NYLATGSTDKTVRLWSTQQGNSVRLF---TGHRGPVLSLAFSPNGKYLASAGEDQR 487
Query: 126 LKLWDL 131
LKLWDL
Sbjct: 488 LKLWDL 493
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L S +D L+LW++ +
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 495
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
++ + GH D + S F + + S MD+S+++WD+
Sbjct: 496 G---TLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
W +D+ + A R++S A +R + GH ++ +KFHP N + + S
Sbjct: 400 WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNS-NYIATGST 458
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D T+RLW+ + + +F GHR VL+ F G + S G D LKLWDL
Sbjct: 459 DKTVRLWSTRQGASVRLF---TGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDL 509
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++S A VR F GH + L F P L S +D L+LW++ +
Sbjct: 453 IATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNG-KYLASAGEDQRLKLWDLAS 511
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+F + GH D + S F + + S MD+++++WD+
Sbjct: 512 G---GLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 138 (53.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH +I + FHP F L++S S+D T+R+W+ +T ++GH D V FD
Sbjct: 106 GHRASITRVIFHPI-FALMVSASEDATIRIWDFETG---EYERSLKGHTDSVQDVAFDAQ 161
Query: 114 GTKIMSCGMDHSLKLWD 130
G + SC D S+KLWD
Sbjct: 162 GKLLASCSADLSIKLWD 178
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/117 (26%), Positives = 61/117 (52%)
Query: 28 LLAVAGSRAVIRIFS-PAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
LLA + I+++ + C++ +GH H ++ + F P + +LS S+D T+++W +
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG-DYVLSASRDRTIKMWEV 222
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT-----KPEIKD 138
T C+ + GHR+ V + G+ +C D ++++W LT K E++D
Sbjct: 223 ATGYCVKTY---TGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRD 275
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 27 PLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85
P LA +GSR IRI+ + C+ GH + + L FHP L+S S D T+R+W+
Sbjct: 310 PFLA-SGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGG-KYLVSASDDKTIRVWD 367
Query: 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
++ C+ + H+ S DF ++S +D ++K+W+
Sbjct: 368 LRNKRCMKT---LYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 113 (44.8 bits), Expect = 0.00083, P = 0.00083
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+ A A IRI+ R GH ++ ++ F Q LL S S D +++LW+ +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG-KLLASCSADLSIKLWDFQ 180
Query: 88 TDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
CI + GH V S F G ++S D ++K+W++ C ++YT
Sbjct: 181 QSYECIKT---MHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVAT----GYCVKTYT 232
Score = 44 (20.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 151 STRPFDTQKEHFPQFSTRDIHRNYVDCVRWL--GDFVLSKSCENCIICWK 198
S + +D Q+ + T H + V V ++ GD+VLS S + I W+
Sbjct: 173 SIKLWDFQQS-YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 146 (56.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 1 MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAIN 60
M T +L+ + W + A A R+++ + +R F GH N
Sbjct: 708 METMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCN 767
Query: 61 ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC 120
++FHP + N L + S D + RLW I+T C+ IF GHR + + F G + +
Sbjct: 768 TVRFHP-NINYLATGSNDKSARLWEIQTGKCVRIF---MGHRAPIYTVAFSPDGRLLATA 823
Query: 121 GMDHSLKLWDL-TKPEIK 137
G D S+ LWDL T ++K
Sbjct: 824 GEDTSVILWDLSTGKKVK 841
Score = 45 (20.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSK 284
++ + FS D ILA G+ +WD+ SS+ Q S S R+T SK
Sbjct: 850 VYSLDFSCD--GSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLINDESRKRKTLKSK 905
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 134 (52.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 2 STRYSLLIEENFYTCAWSMDL--ESGRPLLAVAGSRAVIRIFSPAF-HACVRHFYGHGHA 58
+T YSL+ ++ S DL S A +RI+ + C++ GH +
Sbjct: 72 ATNYSLIHRYEGHSSGIS-DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNF 130
Query: 59 INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIM 118
+ + F+P NL++S S D T+R+W +KT C+ + ++ H + S F+ G+ I+
Sbjct: 131 VFCVNFNPPS-NLIVSGSFDETIRIWEVKTGKCVRM---IKAHSMPISSVHFNRDGSLIV 186
Query: 119 SCGMDHSLKLWD 130
S D S K+WD
Sbjct: 187 SASHDGSCKIWD 198
Score = 109 (43.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 26/105 (24%), Positives = 54/105 (51%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
LLA A + ++S ++ + + GH I++L + D + S S D TLR+W+ +
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDAR 115
Query: 88 TDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+ C+ + + GH + V +F+ I+S D ++++W++
Sbjct: 116 SPYECLKV---LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Score = 45 (20.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 171 HRNYVDCVRWL-----GDFVLSKSCENCIICW 197
H N V C+ G +++S S +NC+ W
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 44 (20.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 239 KILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR----QTTLSKNGNVL 289
K + G++ Y+WDL ++ I ++ H + +V Q +S +GN L
Sbjct: 271 KYIVSGSEDNCVYLWDLQARN---ILQRLEGHTDAVISVSCHPVQNEISSSGNHL 322
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKF 64
++L + + Y W +D+ S L +GS R++S +R + GH ++ +KF
Sbjct: 377 TVLYQGHAYP-VWDVDI-SPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 434
Query: 65 HPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH 124
HP N L + S D T+RLW+ + + +F GHR VLS F G + S G D
Sbjct: 435 HPNS-NYLATGSTDKTVRLWSAQQGNSVRLF---TGHRGPVLSLSFSPNGKYLASAGEDQ 490
Query: 125 SLKLWDL 131
LKLWDL
Sbjct: 491 RLKLWDL 497
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L S +D L+LW++ +
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+F + GH D + S F I S MD+S+++WD+
Sbjct: 500 G---TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKF 64
++L + + Y W +D+ S L +GS R++S +R + GH ++ +KF
Sbjct: 377 TVLYQGHAYP-VWDLDI-SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 434
Query: 65 HPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH 124
HP N L + S D T+RLW+ + + +F GHR VLS F G + S G D
Sbjct: 435 HPNS-NYLATGSTDKTVRLWSAQQGNSVRLF---TGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 125 SLKLWDL 131
LKLWDL
Sbjct: 491 RLKLWDL 497
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 30/103 (29%), Positives = 49/103 (47%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L S +D L+LW++ +
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
++ + GH D + S F I S MD+S+++WD+
Sbjct: 500 G---TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKF 64
++L + + Y W +D+ S L +GS R++S +R + GH ++ +KF
Sbjct: 395 TVLYQGHAYP-VWDLDI-SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 452
Query: 65 HPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH 124
HP N L + S D T+RLW+ + + +F GHR VLS F G + S G D
Sbjct: 453 HPNS-NYLATGSTDKTVRLWSAQQGNSVRLF---TGHRGPVLSLAFSPNGKYLASAGEDQ 508
Query: 125 SLKLWDL 131
LKLWDL
Sbjct: 509 RLKLWDL 515
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L S +D L+LW++ +
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 517
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
++ + GH D + S F + I S MD+S+++WD+
Sbjct: 518 G---TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL-LLSVSK 77
+M +S LLA G + I+I+ C + G ++ ++FHP L L S S
Sbjct: 115 TMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSM 174
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPEI 136
D+ +R+W++ + C+A+ ++GH V S F G ++S G D +W+L T+ I
Sbjct: 175 DYKIRIWDLNSSKCVAV---LDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESI 231
Query: 137 K 137
+
Sbjct: 232 R 232
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/126 (24%), Positives = 64/126 (50%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
W + +LA + + ++++ +C++ F GH ++ ++ F + LL S
Sbjct: 536 WCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLL-SGGS 594
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW-DLTKPEI 136
D L+LW IKT+ C+ ++GH D++ + +++ D S+ LW D+T+ E
Sbjct: 595 DGLLKLWTIKTNECVKT---LDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTEIEQ 651
Query: 137 KDACAE 142
++A A+
Sbjct: 652 EEAQAK 657
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+A + +++S + + F GH I ++F P D +L + S D TL+LW ++
Sbjct: 504 LIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVD-QILATSSADGTLKLWGLQ 562
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
C+ F EGH VL F GT+++S G D LKLW + E
Sbjct: 563 DFSCLKTF---EGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNE 607
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKF 64
++L + + Y W +D+ S L +GS R++S +R + GH ++ +KF
Sbjct: 377 TVLYQGHAYP-VWDVDI-SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 434
Query: 65 HPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH 124
HP N L + S D T+RLW+ + + +F GHR VLS F G + S G D
Sbjct: 435 HPNS-NYLATGSTDKTVRLWSAQQGNSVRLF---TGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 125 SLKLWDL 131
LKLWDL
Sbjct: 491 RLKLWDL 497
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L S +D L+LW++ +
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+F + GH D + S F + I S MD+S+++WD+
Sbjct: 500 G---TLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 120 (47.3 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 38 IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
+R++S VR F GH + L F P L S +D L+LW++ + +F
Sbjct: 4 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG-KYLASAGEDQRLKLWDLASG---TLFKE 59
Query: 98 VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+ GH D + S F I S MD+S+++WD+
Sbjct: 60 LRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 93
Score = 105 (42.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+ LA AG ++++ A + GH +I L F P D L+ S S D
Sbjct: 27 SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASASMD 85
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADF-DLLGTKIMSCGM 122
+++R+W+I++ C G G V + ++L + M+C +
Sbjct: 86 NSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNL 130
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D T+RLW+ + + +F GHR VLS F G + S G D LKLWDL
Sbjct: 1 DKTVRLWSAQQGNSVRLF---TGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL 51
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A S +R++ CVR F GH + L P D + S +D T+ +W++ T
Sbjct: 517 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLST 575
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP-EIKDACAESYTFN 147
CI + GH V S + G+ + S D ++KLWD+T ++ A ++ N
Sbjct: 576 ARCIT---PLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSN 632
Query: 148 PARSTRPFDTQKE--HFPQFSTRDI 170
RS R F T+ H +FS R++
Sbjct: 633 RLRSLRTFPTKSTPVHALRFSRRNL 657
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSA 108
+R GH ++ +++HP + N + + S D T+RLW+++T C+ IF GHR VLS
Sbjct: 495 LRIMAGHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQTGECVRIF---IGHRSMVLSL 550
Query: 109 DFDLLGTKIMSCGMDHSLKLWDLT 132
G + S D ++ +WDL+
Sbjct: 551 AMSPDGRYMASGDEDGTIMMWDLS 574
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + L A I+++S + Y H H + KF P D L++S S+D
Sbjct: 107 SVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 165
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ + C+ F G + V DF GT I S G DH++++WD+
Sbjct: 166 KTIKIWDTTSKQCVNNFSDSVGFANFV---DFSPNGTCIASAGSDHAVRIWDI 215
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D +A A + ++S HA + GH + L+F PQ NLL S S+D
Sbjct: 23 SADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG-NLLASASRD 81
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+RLW + + F + H V S DF G +++ D S+K+W +
Sbjct: 82 KTVRLWVLDRKGKSSEF---KAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 142 (55.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 53/232 (22%), Positives = 100/232 (43%)
Query: 35 RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAI 94
+A+ R+ A C GHG AI F P + ++S S D T R+W+ T +
Sbjct: 129 QAIFRV--KAVSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHT 186
Query: 95 FGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT-FNPARSTR 153
++GH VL+ + G I + MD+++++WD K + A + + + + +
Sbjct: 187 ---LKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWE 243
Query: 154 PFDTQKEHFPQFST--RDIHRNYVDCVRWLGDFVLS--KSCENCIICWKPGRL----EDK 205
P+ Q+ P+ ++ +D D + D VLS K C+ G++ D+
Sbjct: 244 PYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDR 303
Query: 206 ELRT-NETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD 256
++ N T+I L+ + + S D+ + A + +G+ D D
Sbjct: 304 TIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRT-AYHDHTGKVPESDAD 354
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A AG +++++ + GH A+ + F D LL+S SKD TL++WN++T
Sbjct: 420 IASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSA-DSRLLVSSSKDTTLKVWNVRT 478
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
+ + GH+DEV + D+ G K+ S G D ++++W
Sbjct: 479 G---KLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 142 (55.0 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFH 65
++L + + Y W +D+ A A R++S +R + GH ++ +KFH
Sbjct: 377 TVLYQGHAYP-VWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFH 435
Query: 66 PQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125
P N L + S D T+RLW+ + + +F GHR VL+ F G + S G D
Sbjct: 436 PNS-NYLATGSTDKTVRLWSTQQGNSVRLF---TGHRGPVLALAFSPNGKYLASAGEDQR 491
Query: 126 LKLWDL 131
LKLWDL
Sbjct: 492 LKLWDL 497
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L S +D L+LW++ +
Sbjct: 441 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG-KYLASAGEDQRLKLWDLAS 499
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
++ + GH D + S F + I S MD+S+++WD+
Sbjct: 500 G---TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + LA A I+++S + Y H H + KF P D L++S S+D
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 123
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ C+ F G + V DF+ GT I S G D ++K+WD+
Sbjct: 124 KTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVWDV 173
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AGS ++++ + ++H+ H +N + FHP N L++ S D
Sbjct: 150 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG-NYLITASSDG 208
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ I ++GH V + F G S G D + LW
Sbjct: 209 TLKILDLLEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 140 (54.3 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + LA A I+++S + Y H H + KF P D L++S S+D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 165
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ C+ F G + V DF+ GT I S G D ++K+WD+
Sbjct: 166 KTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVWDV 215
Score = 122 (48.0 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/113 (30%), Positives = 51/113 (45%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+DL LA A + +++ HA + GH + ++F P NLL S S+D
Sbjct: 23 SLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG-NLLASASRD 81
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+RLW I F + H V S DF G + + D S+K+W +
Sbjct: 82 RTVRLW-IPDKR--GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AGS ++++ + ++H+ H +N + FHP D N L++ S D
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSD-NYLVTASSDG 250
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ I ++GH V + F G S G D + LW
Sbjct: 251 TLKILDLLEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 145 (56.1 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 28/108 (25%), Positives = 58/108 (53%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+ +PL G I++++ H C+ GH I ++FH ++ ++S S D T+R+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRI 119
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
WN ++ C+++ + GH V+ A F ++S +D ++++WD+
Sbjct: 120 WNWQSRTCVSV---LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 121 (47.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 30/114 (26%), Positives = 57/114 (50%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D +S + A ++I+ + GH + + F+PQ +L++S S
Sbjct: 128 AWSADSKS----IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS-SLVVSGS 182
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W+++T +C+ + H D V + F+ G+ I S D +++WD
Sbjct: 183 FDESVRIWDVRTGMCVKT---LPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ CV+ H ++ + F+ +D +L+ S S D +R+W+
Sbjct: 177 LVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFN-RDGSLITSGSYDGLVRIWDTA 235
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
C+ V+ V F G I+S +D++LKLWD K
Sbjct: 236 NGQCVKTL--VDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGK 279
Score = 102 (41.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/103 (21%), Positives = 54/103 (52%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
L + + ++I++ + +C R GH +N+ + D +++ S D TL+++ + T
Sbjct: 94 LGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA-DSKSIVTASDDKTLKIYEVPT 152
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+ + ++GH + V +F+ + ++S D S+++WD+
Sbjct: 153 ---VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDV 192
Score = 57 (25.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 182 GDFVLSKSCENCIICWKPGRLED-KELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKI 240
G ++LS + +N + W G+ + K+ + +E N K C F FS+ + I
Sbjct: 260 GKYILSSNLDNTLKLWDFGKGKTLKQYQGHENN---------KYCI--FANFSVTGGKWI 308
Query: 241 LAVGNQSGRTYVWDLDVQD 259
++ G++ + YVW+L ++
Sbjct: 309 IS-GSEDCKIYVWNLQTKE 326
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 140 (54.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + LA A I+++S + Y H H + KF P D L++S S+D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 165
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ C+ F G + V DF+ GT I S G D ++K+WD+
Sbjct: 166 KTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVWDV 215
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 34/113 (30%), Positives = 51/113 (45%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+DL LA A + +++ HA + GH + ++F P NLL S S+D
Sbjct: 23 SLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG-NLLASASRD 81
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+RLW I F + H V S DF G + + D S+K+W +
Sbjct: 82 RTVRLW-IPDKR--GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 131 (51.2 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 139
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 140 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 181
Score = 116 (45.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 36 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 93
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 94 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 140
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 131 (51.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 116 (45.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>UNIPROTKB|O95170 [details] [associations]
symbol:CDRT1 "CMT1A duplicated region transcript 1 protein"
species:9606 "Homo sapiens" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:U43383 EMBL:U65652 EMBL:AF045592 EMBL:AF045588
EMBL:AF045589 EMBL:AF045590 EMBL:AF045591 EMBL:AC005324
EMBL:AC005838 IPI:IPI00796531 IPI:IPI00815659 RefSeq:NP_006373.2
UniGene:Hs.548021 UniGene:Hs.632233 ProteinModelPortal:O95170
SMR:O95170 STRING:O95170 PhosphoSite:O95170 PaxDb:O95170
PRIDE:O95170 DNASU:374286 Ensembl:ENST00000354433
Ensembl:ENST00000395906 GeneID:374286 KEGG:hsa:374286
UCSC:uc002gov.4 UCSC:uc010vvy.2 CTD:374286 GeneCards:GC17M015470
GeneCards:GC17M015478 HGNC:HGNC:14379 HPA:HPA013332 MIM:604596
neXtProt:NX_O95170 PharmGKB:PA134869447 HOGENOM:HOG000172165
InParanoid:O95170 OrthoDB:EOG480HWG GenomeRNAi:374286
NextBio:100140 Bgee:O95170 CleanEx:HS_CDRT1 Genevestigator:O95170
Uniprot:O95170
Length = 752
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SG L+AV+ +R + + A F GH ++ L F ++ N LLS S D ++R
Sbjct: 421 SGGDLIAVSSNRKIHLLDIIQVKAIPVEFRGHAGSVRAL-FLCEEENFLLSGSYDLSIRY 479
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES 143
W++K+ +C IFGG +G ++ DL +++S G D +K+WD+ + C ++
Sbjct: 480 WDLKSGVCTRIFGGHQG----TITC-MDLCKNRLVSGGRDCQVKVWDVDTGK----CLKT 530
Query: 144 YTF-NPARSTRPFDT 157
+ +P +TR DT
Sbjct: 531 FRHKDPILATRINDT 545
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/127 (30%), Positives = 54/127 (42%)
Query: 7 LLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHP 66
+L E WS S +A + +I+ C YGH ++N ++F P
Sbjct: 429 ILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFP 488
Query: 67 QDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL 126
N LL+ S D TL +W+ +T IC + GH + A FD G I SC
Sbjct: 489 FS-NTLLTSSADKTLSIWDARTGICEQ---SLYGHMHSINDAIFDPRGHMIASCDACGVT 544
Query: 127 KLWDLTK 133
KLWD K
Sbjct: 545 KLWDFRK 551
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/116 (26%), Positives = 61/116 (52%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+ +PL G I++++ H C+ GH I ++FH ++ ++S S D T+R+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEN-PWIVSASDDQTIRI 119
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA 139
WN ++ CI++ + GH V+ A F ++S +D ++++WD+ + K A
Sbjct: 120 WNWQSRTCISV---LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSA 172
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNL-LLSVSK 77
SM + LLA G I+++ C + G ++ ++FHP L L S S
Sbjct: 111 SMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSS 170
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
D +R+W++++ C+ + +E H V + F G ++S G D +WDL + ++K
Sbjct: 171 DCAIRIWDLRSSRCVCV---LESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVK 227
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + ++F P D +L S S D ++R+W+I+ C+ F EGH VL F
Sbjct: 524 GHRRGVWSVQFSPVD-QILGSASADGSVRIWSIQDFSCLKTF---EGHDASVLKIIFVSR 579
Query: 114 GTKIMSCGMDHSLKLWDLTKPE 135
GT+++S G D +KLW + E
Sbjct: 580 GTQLVSSGSDGLVKLWTIKTNE 601
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACV 49
M ++S L AGS+ V+R++ + CV
Sbjct: 251 MGVKSDALHLVTAGSKGVLRVWDSSSSRCV 280
Score = 38 (18.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 13 FYTCA-------WSMDLESGR 26
F TCA W MD+ SGR
Sbjct: 401 FATCAKDKSVRVWRMDVSSGR 421
>UNIPROTKB|H0Y626 [details] [associations]
symbol:H0Y626 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR000315
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00643 PROSITE:PS50082 PROSITE:PS50119
PROSITE:PS50294 SMART:SM00320 SMART:SM00336 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR006574 SMART:SM00589 EMBL:AC005324 EMBL:AC005838
ProteinModelPortal:H0Y626 Ensembl:ENST00000455584 Uniprot:H0Y626
Length = 953
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SG L+AV+ +R + + A F GH ++ L F ++ N LLS S D ++R
Sbjct: 731 SGGDLIAVSSNRKIHLLDIIQVKAIPVEFRGHAGSVRAL-FLCEEENFLLSGSYDLSIRY 789
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES 143
W++K+ +C IFGG +G ++ DL +++S G D +K+WD+ + C ++
Sbjct: 790 WDLKSGVCTRIFGGHQG----TITC-MDLCKNRLVSGGRDCQVKVWDVDTGK----CLKT 840
Query: 144 YTF-NPARSTRPFDT 157
+ +P +TR DT
Sbjct: 841 FRHKDPILATRINDT 855
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D + LA A I++++ + Y H H + KF P D L++S S+D
Sbjct: 107 SVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 165
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+++W+ C+ F G + V F+ GT I S G DH++K+WD+
Sbjct: 166 KTIKIWDTTNKQCVNNFSDFVGFANFVA---FNPNGTCIASAGSDHTVKIWDI 215
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 65/258 (25%), Positives = 101/258 (39%)
Query: 42 SPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGH 101
SP R+F GH AI + F P L S D L LW+++ F V GH
Sbjct: 4 SPEDPVLERYFKGHKAAITSVDFSPNGKQLATG-SWDTFLMLWSLRPQA--RAFRYV-GH 59
Query: 102 RDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEH 161
+D + S F LG + S D +++LW + K + +++T P RS F +
Sbjct: 60 KDVITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTA-PVRSV-DFSADGQF 116
Query: 162 FPQFST-RDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRL-----EDKELRT-NETNV 214
S + I + R+L C GRL EDK ++ + TN
Sbjct: 117 LASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 215 TIINRLNFKDCEIWFIRF-SMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRC 273
+N NF D + F F + + +A +WD+ V ++L H +
Sbjct: 177 QCVN--NFSDF-VGFANFVAFNPNGTCIASAGSDHTVKIWDIRVN-------KLLQHYQV 226
Query: 274 MSA-VRQTTLSKNGNVLL 290
S V + +GN L+
Sbjct: 227 HSGGVNCVSFHPSGNYLI 244
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 51 HFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI-KTDICIAIFGGVEGHRDEVLSA 108
H Y GH + +++F P+ N LLS S D+TL+LW++ K+ CI + +GH V
Sbjct: 323 HTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTY---KGHFKGVKDV 379
Query: 109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
FD G+ +SC D+++ WD +IK
Sbjct: 380 LFDNDGSSFLSCSYDNNVIYWDTEYGKIK 408
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 51 HFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI-KTDICIAIFGGVEGHRDEVLSA 108
H Y GH + +++F P+ N LLS S D+TL+LW++ K+ CI + +GH V
Sbjct: 323 HTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTY---KGHFKGVKDV 379
Query: 109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
FD G+ +SC D+++ WD +IK
Sbjct: 380 LFDNDGSSFLSCSYDNNVIYWDTEYGKIK 408
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S D +G+ LLA + I+++ C+R +GH H ++ + P +++ S S+D
Sbjct: 157 SFD-HTGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRD 213
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
T+++W + T C+ F GHR+ V + GT I S D ++++W + E K
Sbjct: 214 KTIKMWEVATGYCVKTF---TGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECK 269
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH + + FHP F++++S S+D T+++W+ +T ++GH D V FD
Sbjct: 106 GHRSPVTRVIFHPV-FSVIVSASEDATIKVWDHETG---DFERTLKGHTDSVQDISFDHT 161
Query: 114 GTKIMSCGMDHSLKLWD 130
G + SC D ++KLWD
Sbjct: 162 GKLLASCSADMTIKLWD 178
Score = 114 (45.2 bits), Expect = 0.00064, P = 0.00064
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 23 ESGRP-LLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHT 80
+SG+P ++GSR I+++ + C+ GH + + + HP ++S + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGG-KYIVSCADDKT 361
Query: 81 LRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
LR+W+ K C + H V S DF +++ +D ++K+W+
Sbjct: 362 LRIWDYKNKRCTKT---LSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +R++S VR F GH + L F P L+S +D L+LW++ +
Sbjct: 438 LATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNG-QYLVSAGEDQLLKLWDLAS 496
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
++ + GH D++ S F L + I S MD+S+++WD+
Sbjct: 497 G---TLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDI 536
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/134 (29%), Positives = 62/134 (46%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFH 65
++L + + Y W +D+ A A R++S +R + GH ++ +KFH
Sbjct: 374 TVLYQGHAYP-VWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFH 432
Query: 66 PQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125
P N L + S D T+RLW+ + + +F GH V F G ++S G D
Sbjct: 433 PNS-NYLATGSTDKTVRLWSAQQGNSVRLF---TGHCGPVRCLAFSPNGQYLVSAGEDQL 488
Query: 126 LKLWDLTKPEI-KD 138
LKLWDL + KD
Sbjct: 489 LKLWDLASGTLYKD 502
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 57/231 (24%), Positives = 94/231 (40%)
Query: 54 GHGHAINELKFHPQDFN--LLLSVSKDHTLRLW--NIKTDICIAIFGGVEGHRDEVLSAD 109
GH + ++ + +D LLLS S D T+ LW N++ + A+ GH V S
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC-CRGHAGSVDSIA 196
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
D GTK S D LK+W + +D ES T P + + P T
Sbjct: 197 VDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEES-TNRPRKKQKTEQLGLTRTP-IVTLS 254
Query: 170 IHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEI 227
H+ + V W + + S S ++ I W +E L++ T + N +++ C
Sbjct: 255 GHKEAISSVLWSDAEEICSASWDHTIKVWD---VESGSLKSTLTGNKVFNCISYSPLC-- 309
Query: 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR 278
K LA G+ +WD +D S + + SH +++V+
Sbjct: 310 -----------KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVK 349
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/110 (36%), Positives = 57/110 (51%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
M L+ R +LA A IR+++ A V GH + L+F D L+S S D
Sbjct: 277 MCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF---DQCKLISGSMDK 333
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T+R+WN +T CI+I + GH D VL FD T ++S D ++KLW
Sbjct: 334 TIRIWNYRTSECISI---LHGHTDSVLCLTFD--STLLVSGSADCTVKLW 378
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH +N ++ +D L+LS S D T+++W+++T+ C+ F G + AD
Sbjct: 390 GHTGPVNSVRII-RDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALAD---- 444
Query: 114 GTKIMSCGMDHSLKLWDLTK 133
+++ SC +D ++K WD+ K
Sbjct: 445 -SRLFSCSLDGTIKQWDIEK 463
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 47 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 105
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 106 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 162
Query: 137 KDACAES 143
ES
Sbjct: 163 SPGAVES 169
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
SM ++ LLA G +R++ H HF G ++ + FHP LLL S +
Sbjct: 114 SMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAV 173
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D ++R+W+++ C+A+ + H V S F G ++S G D +WDL
Sbjct: 174 DTSIRVWSLQDRSCLAV---LTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDL 224
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH + ++F P D +L + S D T++LW ++ C+ F EGH VL F
Sbjct: 517 FTGHRRGLWNVQFSPTD-QVLATASADGTIKLWALQDFSCLKTF---EGHDASVLKVAFV 572
Query: 112 LLGTKIMSCGMDHSLKLWDLTKPE 135
G++++S G D LKLW + E
Sbjct: 573 SRGSQLLSSGSDGLLKLWTIKSNE 596
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
W++ +LA A + I++++ +C++ F GH ++ ++ F + LL S S
Sbjct: 525 WNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGS- 583
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW-DLTKPE 135
D L+LW IK++ C+ ++ H D+V L ++ G D + LW D+T+ E
Sbjct: 584 DGLLKLWTIKSNECVRT---LDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVTEAE 639
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT---KPEI 136
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++ K +
Sbjct: 116 TIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 172
Query: 137 KDACAES 143
ES
Sbjct: 173 SPGAVES 179
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH I FH ++ +LS S D
Sbjct: 57 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
T+R+WN ++ C+ + + GH V+ A F ++S +D ++++WD++
Sbjct: 116 TIRIWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS 165
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 24 SGRPLLAVAGSRAV-IRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTL 81
+G+ L++ + ++ + F + C++ GH H ++ + F P DF +LS S+DHT+
Sbjct: 159 AGKQLVSCSSDLSIKLWDFGQTYD-CLKSLKGHEHTVSSVTFLPTGDF--VLSASRDHTI 215
Query: 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
+ W+I T C+ F GH D V GT S +D ++ +W K
Sbjct: 216 KQWDISTGYCVYTF---RGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAK 268
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH I + FHP + ++ S S+D T+++W+ +T + ++GH D V D
Sbjct: 104 GHRLPITRVIFHPL-WTIMASCSEDATIKVWDYETG---QLERTLKGHTDAVNDIAIDAA 159
Query: 114 GTKIMSCGMDHSLKLWD 130
G +++SC D S+KLWD
Sbjct: 160 GKQLVSCSSDLSIKLWD 176
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 61/267 (22%), Positives = 104/267 (38%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFN--LLLSV 75
W +E + RI+S + + GH + ++ + +D LLLS
Sbjct: 103 WISAIEGAEEWILTGSYDKTSRIWSSEGKS-IMTIVGHTDVVKDVAWVKKDSLSCLLLSA 161
Query: 76 SKDHTLRLW--NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
S D T+ LW N++ + A+ GH V S D GT+ S D LK+W
Sbjct: 162 SMDQTILLWEWNVERNKVKALHC-CRGHAGSVDSIAVDSTGTRFCSGSWDKMLKIWSTVP 220
Query: 134 PEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWL-GDFVLSKSCEN 192
+ +D ES T P + + P T H+ + V W + + S S ++
Sbjct: 221 TDEEDEMEES-TNRPRKKQKTEQLGLTRTP-IVTLSGHKEAISSVLWSDAEEICSASWDH 278
Query: 193 CIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEIWFIRFSMDYWQKILAVGNQSGRTY 251
I W +E L++ T + N +++ C K LA G+
Sbjct: 279 TIGVWD---VESGSLKSTLTGNKVFNCISYSPLC-------------KRLASGSTDRHIR 322
Query: 252 VWDLDVQDPSSIKFQILSHPRCMSAVR 278
+WD +D S + + SH +++V+
Sbjct: 323 LWDPRTKDGSLVSLSLTSHTGWVTSVK 349
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 129 (50.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 38/108 (35%), Positives = 52/108 (48%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI------KTDICIAIFGGVEGHRDEV 105
F GH IN L+F P +LLLS D+ ++LW+I K + IF +GH V
Sbjct: 209 FPGHKKGINRLRFFPNSGHLLLSCGNDNLIKLWSIYNTFQGKQYQLLRIF---KGHNLPV 265
Query: 106 LSADFDLLGTKIMSCGMDHSLKLWDLTKPE-IKDACAESYT----FNP 148
F+ G + +SCG D ++LWD E IK +S FNP
Sbjct: 266 KDIIFNQSGERFLSCGYDKYIRLWDTKTGEMIKSIKLKSIPNVLLFNP 313
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 230 IRFSMDYWQKILAVGNQSGRTYVWD 254
I FS D KIL G+ +G Y WD
Sbjct: 446 IDFSPD--GKILMSGDCNGFAYFWD 468
Score = 38 (18.4 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 142 ESYTFNPARSTRPFDTQKEHFPQFSTRDI 170
E Y FN + T P H Q S D+
Sbjct: 331 EHYDFNSIQYTNPIQIYDHH--QGSINDL 357
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 134 (52.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 34/117 (29%), Positives = 64/117 (54%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH-FYGHGHAINELKFHP-QDFNLLLSVS 76
+M ++ LLA G+ +++++ A A V H F GHG I+ L F Q+ +L S +
Sbjct: 108 TMTIDPTNTLLATGGAEGLVKVWDIA-GAYVTHSFRGHGGVISALCFGKHQNTWVLASGA 166
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
D +RLW++ + +A+F EGH + F+ G+ ++S D ++++W++ K
Sbjct: 167 DDSRVRLWDLNSSRSMAVF---EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKK 220
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 23 ESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
+ GR ++A A I+++ + V GH + F+P L S S D T+R
Sbjct: 475 KDGR-IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFS-RQLASGSGDRTIR 532
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
+WN+ T C+ +EGH +L + GT+++S D +K+W L+ E
Sbjct: 533 IWNVDTQQCVQT---LEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Score = 45 (20.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 241 LAVGNQSGRTYVWDLDVQDPSSIKFQILS-HPRCMSAVRQTTLSKNG 286
LA G + +W+L+++D + + H ++AV L NG
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNG 425
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 192 NCIICWKPGRL-----EDKELRTNETNV-TIINRLNFKDCEIWFIRFSMDYWQKILAVGN 245
N I K GR+ +DK ++ +++ ++ L +W F+ + + LA G+
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNP--FSRQLASGS 526
Query: 246 QSGRTYVWDLDVQ 258
+W++D Q
Sbjct: 527 GDRTIRIWNVDTQ 539
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/105 (24%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ ++D T R+W++
Sbjct: 239 PFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPS-LDVLVTCARDSTARVWDM 297
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + F G H + V + ++++ D +++LWDL
Sbjct: 298 RTKAQVHCFAG---HTNTVADVVCQSVDPQVITASHDATVRLWDL 339
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 131 (51.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 30 AVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
A++GS +R++ A R F GH + + F D ++S S+D T++LWN
Sbjct: 78 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRTIKLWNTLG 136
Query: 89 DICIAIFGGVEGHRDEVLSADF--DLLGTKIMSCGMDHSLKLWDLTKPEIKDACA 141
+ I G EGHRD V F + L I+S D ++K+W+L+ +++ A
Sbjct: 137 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 191
Score = 115 (45.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 44 AFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRD 103
A+ R GH H + ++ D LS S D LRLW++ + F GH
Sbjct: 51 AYGVAQRRLTGHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLAAGVSTRRF---VGHTK 106
Query: 104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAE 142
+VLS F L +I+S D ++KLW+ T E K +E
Sbjct: 107 DVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISE 144
Score = 53 (23.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 27/113 (23%), Positives = 49/113 (43%)
Query: 171 HRNYVDCVRW----LGDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCE 226
HR++V CVR+ L ++S S + + W L + +LR+ T+ +
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN---LSNCKLRS-----TLAGHTGY---- 196
Query: 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDL-DVQDPSSIKFQILSHPRCMSAVR 278
+ + S D + A G + G +WDL + + S++ + H C S R
Sbjct: 197 VSTVAVSPD--GSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNR 247
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 37/116 (31%), Positives = 50/116 (43%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
WS S +A A +I+ C YGH ++N ++F P N+LL+ S
Sbjct: 448 WSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS-NILLTASA 506
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
D TL +W+ +T C + GH V A F G I SC KLWD K
Sbjct: 507 DKTLSVWDARTGKCEQ---SLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRK 559
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A A +R+++ V F GH + ++ + D LLLS SKD TL++W I+T
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRT 433
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
+ + GH DEV + D+ G K++S G D LKLW
Sbjct: 434 K---KLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 28 LLAVAG-SRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
+L +AG S VI+++ VR F GH + ++FHP L S S D LR+W+
Sbjct: 71 VLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVWDT 129
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
+ CI + +GH + + +F G ++S G+D+ +K+WDLT
Sbjct: 130 RKKGCIQTY---KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 172
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 135 (52.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
+M + LLA G +R++ H HF G ++ + FHP LLL S +
Sbjct: 22 TMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAT 81
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D +R+W+++ C+A+ + H V S F G ++S G D +WDL
Sbjct: 82 DAAIRVWSLQDRSCLAV---LTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDL 132
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH + ++F P D +L + S D T++LW ++ C+ F EGH VL F
Sbjct: 406 FSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTF---EGHDASVLKVAFV 461
Query: 112 LLGTKIMSCGMDHSLKLWDLTKPE 135
GT+++S G D +KLW + E
Sbjct: 462 SRGTQLLSSGSDGLVKLWTIKNNE 485
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/109 (33%), Positives = 56/109 (51%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQ-DFNLLLSVSKDHTLRLWNI 86
LLA AG+ + ++ C +F GH ++ + FHP + N+L+S S D T+R+W++
Sbjct: 116 LLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Query: 87 K---TDI-CIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
T+ C+AI +E H V S G + S G D + LWDL
Sbjct: 176 NAKNTEKKCLAI---MEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH I ++F D +++ S D T+++W I C+ F EGH VL A F
Sbjct: 539 GHKRRIFSVEFSTVD-QCVMTASGDKTVKIWAISDGSCLKTF---EGHTSSVLRASFITD 594
Query: 114 GTKIMSCGMDHSLKLWDLTKPE 135
GT+ +SCG D LKLW++ E
Sbjct: 595 GTQFVSCGADGLLKLWNVNTSE 616
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 140 (54.3 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
SM ++ LLA G +R++ H HF G ++ + FHP LLL S +
Sbjct: 114 SMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAV 173
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
D ++R+W+++ C+A+ + H V S F G ++S G D +WDL E
Sbjct: 174 DTSIRVWSLQDRSCLAV---LTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYE 228
Score = 125 (49.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH + ++F P D +L + S D T++LW ++ C+ F EGH VL F
Sbjct: 517 FSGHRRGLWNVQFSPTD-QVLATASADGTIKLWALQDFSCLKTF---EGHDASVLKVAFV 572
Query: 112 LLGTKIMSCGMDHSLKLWDLTKPE 135
G +++S G D LKLW + E
Sbjct: 573 SRGAQLLSSGSDGLLKLWTIKSNE 596
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
W++ +LA A + I++++ +C++ F GH ++ ++ F + LL S S
Sbjct: 525 WNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGS- 583
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW-DLTKPE 135
D L+LW IK++ C+ ++ H D+V L ++ G D + LW D+T+ E
Sbjct: 584 DGLLKLWTIKSNECVRT---LDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAE 639
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 18/82 (21%), Positives = 36/82 (43%)
Query: 177 CVRWLGDFVLSKSCENCII-CWK-PGRLEDKELRTNETNVTIINRLNFKDCEIWFIR-FS 233
C R F+++ S ++C + W P L K ++ ++ + + + C I +
Sbjct: 429 CSRLKESFLVTGS-QDCTVKLWPLPEALPSKNT-ASDGDLIPLQAQSTQRCHDKDINSLA 486
Query: 234 MDYWQKILAVGNQSGRTYVWDL 255
+ K+LA G+Q +W L
Sbjct: 487 VSPNDKLLATGSQDRTAKLWAL 508
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 126 (49.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D R +++ + + ++IF + GH + + F+PQ +L++S S
Sbjct: 136 AWSSD---SRCVVSASDDKT-LKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS-SLVVSGS 190
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT +CI + H D V + F+ G+ I S D +++WD
Sbjct: 191 FDESVRIWDVKTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 113 (44.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L+ S S D +R+W+
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTA 243
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
CI V+ V F G I++ +D +LKLWD +K
Sbjct: 244 NGQCIKTL--VDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Score = 43 (20.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259
N K C F FS+ + I++ G++ + Y+W+L ++
Sbjct: 299 NSKYCI--FANFSVTGGKWIIS-GSEDCKIYIWNLQTRE 334
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 126 (49.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 17 AWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
AWS D R +++ + + ++IF + GH + + F+PQ +L++S S
Sbjct: 136 AWSSD---SRCVVSASDDKT-LKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS-SLVVSGS 190
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
D ++R+W++KT +CI + H D V + F+ G+ I S D +++WD
Sbjct: 191 FDESVRIWDVKTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 113 (44.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L+ S S D +R+W+
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTA 243
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
CI V+ V F G I++ +D +LKLWD +K
Sbjct: 244 NGQCIKTL--VDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Score = 43 (20.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 221 NFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQD 259
N K C F FS+ + I++ G++ + Y+W+L ++
Sbjct: 299 NSKYCI--FANFSVTGGKWIIS-GSEDCKIYIWNLQTRE 334
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
+M + LLA G +R++ H HF G ++ + FHP LLL S +
Sbjct: 114 TMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAT 173
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D +R+W+++ C+A+ + H V S F G ++S G D +WDL
Sbjct: 174 DAAIRVWSLQDRSCLAV---LTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDL 224
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH + ++F P D +L + S D T++LW ++ C+ F EGH VL F
Sbjct: 517 FSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTF---EGHDASVLKVAFV 572
Query: 112 LLGTKIMSCGMDHSLKLWDLTKPE 135
GT+++S G D +KLW + E
Sbjct: 573 SRGTQLLSSGSDGLVKLWTIKNNE 596
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 58/231 (25%), Positives = 93/231 (40%)
Query: 54 GHGHAINELKFHPQDFN--LLLSVSKDHTLRLW--NIKTDICIAIFGGVEGHRDEVLSAD 109
GH + ++ + +D LLLS S D T+ LW N++ + A+ GH V S
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC-CRGHAGSVDSIA 196
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
D GTK S D LK+W + +D ES T P + + P T
Sbjct: 197 VDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEES-TNRPRKKQKTEQLGLTRTP-IVTLS 254
Query: 170 IHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEI 227
H V V W + + S S ++ I W +E L++ T + N +++ C
Sbjct: 255 GHMEAVSSVLWSDAEEICSASWDHTIRVWD---VESGSLKSTLTGNKVFNCISYSPLC-- 309
Query: 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR 278
K LA G+ +WD +D S + + SH +++V+
Sbjct: 310 -----------KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVK 349
>UNIPROTKB|H9L0T1 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0071817 "MMXD complex" evidence=IEA] [GO:0097361 "CIA complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104486 OMA:EEEYECV EMBL:AADN02064069
ProteinModelPortal:H9L0T1 Ensembl:ENSGALT00000028398 Uniprot:H9L0T1
Length = 225
Score = 125 (49.1 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD--ICIAIFGGVEGHRD 103
+ CV H + + +HP LL S S D T++L++ + D +C A +EGH
Sbjct: 23 YECVSVLNSHTQDVKHVVWHPNQ-ELLASASYDDTVKLYHEEEDDWVCCAT---LEGHES 78
Query: 104 EVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
V S FD G ++ SC D ++++W +P ++ A S T
Sbjct: 79 TVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVACSGT 120
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 132 (51.5 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+++ S P L G + + + VR++YGH + + HP ++L S +D+
Sbjct: 255 LEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPT-LDVLFSGGRDN 313
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+R+W+++T IF ++GH+ +LS +++S MD ++KLWDL
Sbjct: 314 CVRVWDMRTRA--NIFE-MKGHKGTILSLKSQNADPQVISGSMDTTVKLWDL 362
>UNIPROTKB|J9PAK6 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0006364 GO:GO:0032040 GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000048785 Uniprot:J9PAK6
Length = 346
Score = 117 (46.2 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 23 ESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHA-INELKFHPQDFNLLLSVSKDHTL 81
++G+ + V G++ + + A A +R I + P D +L + S D T+
Sbjct: 31 QTGQHVFCVCGTK--VNVLDVASGAVLRSLEQEDQEDITAFELSPDD-QVLATASADGTI 87
Query: 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
+LW ++ C+ F EGH VL F GT+++S G D +KLW + E
Sbjct: 88 KLWALQDFSCLKTF---EGHDASVLKVVFVSRGTQLLSSGSDGLVKLWTIKNNE 138
Score = 51 (23.0 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 167 TRDIHRNYV---DCVRWLGDFVLSKSCENCIICWK 198
T D H + V C R L D L+ + ++C+I WK
Sbjct: 142 TLDAHEDKVWGLHCSR-LDDRALTGASDSCVILWK 175
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 26/105 (24%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G +++ + + +RH++GH + LK HP ++L++ +D R+W++
Sbjct: 218 PYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPT-LDVLVTAGRDAVARVWDM 276
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + + GH+ V S ++++ MD +++LWDL
Sbjct: 277 RTRQNVHV---LSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDL 318
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 135 (52.6 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 16 CAWSMDL-ESGRPLLAVAGSRAVIRIFSPAFH---ACVRHFYGHGHAINELKFHPQDFNL 71
C W L E+ R L+A A + + I++ + R F H A+N+L +HP+ +
Sbjct: 72 CCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDC 131
Query: 72 LLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDH-SLKLWD 130
+L+ S+D+TLR+W+I+ D A + + F+ + D+ +++LWD
Sbjct: 132 ILTGSQDNTLRMWDIR-DSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWD 190
Query: 131 LTKPEI 136
+ KP I
Sbjct: 191 IRKPTI 196
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 110 (43.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/87 (24%), Positives = 46/87 (52%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+ ++S + ++ + ++++ C GH +N +K HP+ F+ S S D
Sbjct: 386 LSVDSYQKVIVSGSADKTVKVWHVESRTCYT-LRGHTEWVNCVKLHPKSFSCF-SCSDDT 443
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVL 106
T+R+W+I+T+ C+ +F G G +++
Sbjct: 444 TIRMWDIRTNSCLKVFRGHVGQVQKII 470
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/17 (52%), Positives = 16/17 (94%)
Query: 115 TKIMSCGMDHSLKLWDL 131
T ++SCG+D+++KLWD+
Sbjct: 523 THLLSCGLDNTIKLWDV 539
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/126 (26%), Positives = 64/126 (50%)
Query: 13 FYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
F A+S ++ LL + +++IF + + +R H ++ +F P
Sbjct: 80 FKDTAYSGNIRKDGKLLLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTF 139
Query: 73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD-- 130
LS S D T+++W++ T A+ + GH D V +A + + T+++S G D +++LWD
Sbjct: 140 LSGSDDKTVKVWDLSTG---AVQYDLSGHEDYVRTASW-MSATRLVSGGYDGTIRLWDTR 195
Query: 131 LTKPEI 136
+ PE+
Sbjct: 196 IADPEV 201
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 58/231 (25%), Positives = 93/231 (40%)
Query: 54 GHGHAINELKFHPQDFN--LLLSVSKDHTLRLW--NIKTDICIAIFGGVEGHRDEVLSAD 109
GH + ++ + +D LLLS S D T+ LW N++ + A+ GH V S
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC-CRGHAGSVDSIA 196
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
D GTK S D LK+W + +D ES T P + + P T
Sbjct: 197 VDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEES-TNRPRKKQKTEQLGLTRTPVV-TLS 254
Query: 170 IHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEI 227
H V V W + + S S ++ I W +E L++ T + N +++ C
Sbjct: 255 GHMEAVSSVLWSDAEEICSASWDHTIRVWD---VESGSLKSTLTGNKVFNCISYSPLC-- 309
Query: 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR 278
K LA G+ +WD +D S + + SH +++V+
Sbjct: 310 -----------KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVK 349
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ S+D T R+W++
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDV 316
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V + +I++ D +++LWDL
Sbjct: 317 RTKASVHT---LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ S+D T R+W++
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-LDVLVTCSRDSTARIWDV 316
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V + +I++ D +++LWDL
Sbjct: 317 RTKASVHT---LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ S+D T R+W++
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDV 317
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V + +I++ D +++LWDL
Sbjct: 318 RTKASVHT---LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ S+D T R+W++
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDV 317
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V + +I++ D +++LWDL
Sbjct: 318 RTKASVHT---LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ S+D T R+W++
Sbjct: 260 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDV 318
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V + +I++ D +++LWDL
Sbjct: 319 RTKASVHT---LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 360
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/105 (24%), Positives = 55/105 (52%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L++ S+D T R+W++
Sbjct: 261 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDV 319
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V + ++++ D +++LWDL
Sbjct: 320 RTKASVHT---LSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDL 361
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/106 (26%), Positives = 57/106 (53%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ +L HP ++L++ S+D T R+W+I
Sbjct: 263 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPT-IDVLVTCSRDATARVWDI 321
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGM-DHSLKLWDL 131
+T + + GH + V + ++++ G D +++LWDL
Sbjct: 322 RTKANVHT---LSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDL 364
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 121 (47.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 17 AWSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSV 75
AWS D L V+GS ++++ + ++ GH + + F+PQ NL++S
Sbjct: 121 AWSSDSR-----LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQS-NLIVSG 174
Query: 76 SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
S D ++R+W+++T C+ + H D V + F+ G+ I+S D ++WD
Sbjct: 175 SFDESVRIWDVRTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 29 LAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L V+GS +RI+ C++ H ++ + F+ +D +L++S S D R+W+
Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 228
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYT 145
+ C+ ++ V F G I++ +D++LKLWD +K + C ++YT
Sbjct: 229 SGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYT 280
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKIL 241
G ++L+ + +N + W + K L+T N K C F FS+ + I+
Sbjct: 253 GKYILAATLDNTLKLWDYSK--GKCLKT------YTGHKNEKYCI--FANFSVTGGKWIV 302
Query: 242 AVGNQSGRTYVWDLDVQD 259
+ G++ Y+W+L ++
Sbjct: 303 S-GSEDNMVYIWNLQSKE 319
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +PL G I++++ C+ GH + + FHP+ +LS S D
Sbjct: 57 IDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPE-LPWILSASDDQ 115
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDA 139
T+R+WN + I + GH V+ A F I S +D S+++WD++ K +
Sbjct: 116 TIRIWNWQNRSLICT---MTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHS 172
Query: 140 CAESYTFNPARSTRPFDTQKEHF 162
+ +F + R + Q + F
Sbjct: 173 APTTMSFED-QMARANNAQADMF 194
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
PL G I++++ C+ H + + FH ++ +LS S D T+R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFH-HEYPWILSASDDQTIRIWNW 122
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
++ CI + + GH V+ A F +I+S +D ++++WD++
Sbjct: 123 QSRNCICV---LTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDIS 165
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +A I+++ CV + GH A+ L+F P D L S + D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADD 168
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
HT++LW++ ++ F GH V +F + S D +++ WDL K ++
Sbjct: 169 HTVKLWDLTAGKMMSEF---PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV- 224
Query: 139 ACAE 142
+C E
Sbjct: 225 SCIE 228
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00063
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIF------SPAFHACVRHFYGHGHAINELKFHPQDFNLL 72
S+ +G+P L ++ SR I F VR F GH H + + D
Sbjct: 22 SLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL-TADGAYA 80
Query: 73 LSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
LS S D TLRLW++ T F GH+ +V+S D D + I+S D ++K+W +
Sbjct: 81 LSASWDKTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 30 AVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89
A + S I I++ + GH I+++ + P + N+L S S D T+RLWNI
Sbjct: 42 ACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQ 101
Query: 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
CI + + H + + F G ++S D ++ +WD+T
Sbjct: 102 RCIKL---LRKHTYHITTLKFTQKGNILISGSSDETITIWDIT 141
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 66/281 (23%), Positives = 111/281 (39%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+LA IR+++ C++ H + I LKF Q N+L+S S D T+ +W+I
Sbjct: 83 ILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKF-TQKGNILISGSSDETITIWDI- 140
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN 147
T I + H D V S + I+S D ++L+DL + S TF
Sbjct: 141 TSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNS-TFG 199
Query: 148 PARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPGRLEDKEL 207
+ +FP + ++ N G F+L+ S + I W +E+K
Sbjct: 200 GHGTATASTNDVINFP-IAKVELSPN--------GQFILNSSLDGKIRLWN--YMENKVY 248
Query: 208 RTNE--TNVTIINRLNFKDCEIWFIRFSM--------------DYWQKILAV-GNQSGRT 250
+T + I + N C+I FI ++ + + +L V G+ S
Sbjct: 249 KTYQGINGEKICEKFN---CDIKFITRNVNSNAITITSNNNDDEQYNNVLIVSGSDSTGL 305
Query: 251 YVWDLDVQDPSSIKFQILSHPRCMSAVRQTTLSKNGNVLLC 291
+WD+ + I FQ+ A+ K G +L C
Sbjct: 306 LIWDIQSKQ---IVFQVDPQTCGKDAILGVDTYKQGEILGC 343
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +A I+++ CV + GH A+ L+F P D L S + D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADD 168
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
HT++LW++ ++ F GH V +F + S D +++ WDL K ++
Sbjct: 169 HTVKLWDLTAGKMMSEF---PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV- 224
Query: 139 ACAESYTFNPARS 151
+C E P RS
Sbjct: 225 SCIEGEP-GPVRS 236
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +A I+++ CV + GH A+ L+F P D L S + D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADD 168
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
HT++LW++ ++ F GH V +F + S D +++ WDL K ++
Sbjct: 169 HTVKLWDLTAGKMMSEF---PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV- 224
Query: 139 ACAESYTFNPARS 151
+C E P RS
Sbjct: 225 SCIEGEP-GPVRS 236
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +A I+++ CV + GH A+ L+F P D L S + D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADD 168
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
HT++LW++ ++ F GH V +F + S D +++ WDL K ++
Sbjct: 169 HTVKLWDLTAGKMMSEF---PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV- 224
Query: 139 ACAESYTFNPARS 151
+C E P RS
Sbjct: 225 SCIEGEP-GPVRS 236
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +A I+++ CV + GH A+ L+F P D L S + D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADD 168
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
HT++LW++ ++ F GH V +F + S D +++ WDL K ++
Sbjct: 169 HTVKLWDLTAGKMMSEF---PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV- 224
Query: 139 ACAESYTFNPARS 151
+C E P RS
Sbjct: 225 SCIEGEP-GPVRS 236
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 29 LAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L VAGS++ IR++ +R GH I L FHP + S S+D ++LW+I+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
C+ + GH V F G + S DH++KLWDLT
Sbjct: 136 RKGCVFRY---RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+D +A I+++ CV + GH A+ L+F P D L S + D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADD 168
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKD 138
HT++LW++ ++ F GH V +F + S D +++ WDL K ++
Sbjct: 169 HTVKLWDLTAGKMMSEF---PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV- 224
Query: 139 ACAESYTFNPARS 151
+C E P RS
Sbjct: 225 SCIEGEP-GPVRS 236
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + ++S C+ GH + ++ + + L+++ S+ ++R+
Sbjct: 32 SGR-LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G + S D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/110 (26%), Positives = 49/110 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A A S +R++ H ++H+ H A+N L FHP N LL+ S D
Sbjct: 192 VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSG-NHLLTASSDS 250
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ + + GH+ F G + S G D + +W
Sbjct: 251 TLKILDLLEG---RLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 58/241 (24%), Positives = 98/241 (40%)
Query: 25 GRPLLAVAGSRAVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
G LLA G ++++ C G I ++F + LL+ S D R
Sbjct: 328 GSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAG-SYLLAASNDFASR 386
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP--EIK--- 137
+W + + + GH +VLSA F L +I+S D +LKLWDL +K
Sbjct: 387 IWTVDD---YRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVF 443
Query: 138 --DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIH-RNYVDCVRWLGDFVLSKSCENCI 194
+C + + FD +K F S ++ H + ++ + + L+ +
Sbjct: 444 AGSSCNDIVCTEQCVMSGHFD-KKVRFWDISYQNYHIQKQLNKLCRVTSLDLNHDRTELL 502
Query: 195 ICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD 254
C + ++ +LRTN T N FK C F R + +A G+ G Y+W+
Sbjct: 503 TCSRDDLVKIIDLRTNAVRQTF-NAQGFK-CGSDFTRVTFSPDGSFVAAGSADGVLYLWN 560
Query: 255 L 255
+
Sbjct: 561 V 561
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 65/246 (26%), Positives = 99/246 (40%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVS 76
++ G LLA G ++++ C G I ++F + LL+ S
Sbjct: 327 AVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAG-SYLLAAS 385
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPE 135
D R+W + + + GH +VLSA F L +I+S D +LKLWDL +K
Sbjct: 386 NDFASRIWTVDD---YRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC 442
Query: 136 IKDACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIH-RNYVDCVRWLGDFV---LSKSC 190
IK A S + N T HF + DI + V + LG L+
Sbjct: 443 IKTVFAGS-SCNDIVCTEQC-VMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPER 500
Query: 191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF-IRFSMDYWQKILAVGNQSGR 249
+ C + L+ +LRTN T + FK W + FS D +A G+ G
Sbjct: 501 TELLSCSRDDLLKVIDLRTNAIKQTF-SAPGFKCGSDWTRVVFSPD--GSYVAAGSAEGS 557
Query: 250 TYVWDL 255
Y+W +
Sbjct: 558 LYIWSV 563
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/108 (31%), Positives = 50/108 (46%)
Query: 22 LESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTL 81
L+ R L I+I+ CV+ GH + L F Q L+S D T+
Sbjct: 389 LQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQK---LISGGLDSTI 445
Query: 82 RLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
++WN T CIA + GH D V+S DF I+S DH++++W
Sbjct: 446 KVWNYHTGQCIATY---RGHEDAVVSVDFT--NKSIVSGSADHTVRVW 488
>TAIR|locus:2180952 [details] [associations]
symbol:AT5G15550 "AT5G15550" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 EMBL:AL391143
HSSP:P16649 GO:GO:0080008 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:DCTINLW EMBL:AY064011 EMBL:AY091257
IPI:IPI00525355 PIR:T51533 RefSeq:NP_197059.1 UniGene:At.27103
ProteinModelPortal:Q9LF27 SMR:Q9LF27 STRING:Q9LF27 PaxDb:Q9LF27
PRIDE:Q9LF27 EnsemblPlants:AT5G15550.1 GeneID:831408
KEGG:ath:AT5G15550 TAIR:At5g15550 InParanoid:Q9LF27
PhylomeDB:Q9LF27 ProtClustDB:CLSN2687473 ArrayExpress:Q9LF27
Genevestigator:Q9LF27 Uniprot:Q9LF27
Length = 433
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 28 LLAVAGSRAVIRIFSP---AFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84
L+A GS ++R++ P A V F H I+ K+H + LLS S D + LW
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLW 386
Query: 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128
+++T +++ ++ H D+VLSAD+ G ++S G D +L++
Sbjct: 387 DLRTAWPLSV---IDTHNDKVLSADW-WKGESVVSGGADSNLRI 426
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 327 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 382
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 383 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 421
>WB|WBGene00016374 [details] [associations]
symbol:swd-2.2 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0040035 GO:GO:0043652 EMBL:FO080768 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
PIR:T34139 RefSeq:NP_501280.1 ProteinModelPortal:Q18403 SMR:Q18403
STRING:Q18403 PaxDb:Q18403 EnsemblMetazoa:C33H5.7 GeneID:177561
KEGG:cel:CELE_C33H5.7 UCSC:C33H5.7 CTD:177561 WormBase:C33H5.7
InParanoid:Q18403 NextBio:897372 Uniprot:Q18403
Length = 326
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 28 LLAVAGSRAV---IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84
+ A+ GS V IR S + +R+F GH + + P D ++ LSV++D T+RLW
Sbjct: 81 MCALHGSTKVDNTIRYLSLTDNKYIRYFQGHDKLVTGINVSPMD-DMFLSVAEDKTIRLW 139
Query: 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSL-KLWDL 131
++KT CI + + A FD G + + G+D+++ KL+DL
Sbjct: 140 DLKTHNCIGLM-----NLSATPIATFDPEGL-LFAAGLDNNIIKLYDL 181
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 66/246 (26%), Positives = 98/246 (39%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVS 76
++ G LLA G ++++ C G I ++F LL+ S
Sbjct: 327 AVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGA-YLLAAS 385
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPE 135
D R+W + + + GH +VLSA F L +I+S D +LKLWDL +K
Sbjct: 386 NDFASRIWTVDD---YRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC 442
Query: 136 IKDACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIH-RNYVDCVRWLGDFV---LSKSC 190
IK A S + N T HF + DI + V + LG L+
Sbjct: 443 IKTVFAGS-SCNDIVCTEQC-VMSGHFDKKIRFWDIRSESVVREMELLGKITALDLNPER 500
Query: 191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF-IRFSMDYWQKILAVGNQSGR 249
+ C + L+ +LRTN T + FK W + FS D +A G+ G
Sbjct: 501 TELLSCSRDDLLKVIDLRTNAVKQTF-SAPGFKCGSDWTRVVFSPD--GSYVAAGSAEGS 557
Query: 250 TYVWDL 255
YVW +
Sbjct: 558 LYVWSV 563
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 344 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 399
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 400 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 438
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 344 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 399
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 400 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 438
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 349 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 404
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 405 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 443
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 357 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 412
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 413 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 451
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/108 (27%), Positives = 52/108 (48%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+G LA A IRI+ VR GH + ++ + F+P LL+S S D T+R+
Sbjct: 106 TGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRI 164
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
WN++ C+ + + H + ++S GT + D ++WD+
Sbjct: 165 WNLQDGTCLRM---LPAHSEPIISVSISADGTLCATASYDGMARIWDV 209
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 6 SLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFH 65
+L E TC + + + +A + S I+I+S +GH I+++K+
Sbjct: 49 TLFGHEKSVTC---VSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWA 105
Query: 66 PQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125
L S S D T+R+W+ + + ++GH + V S DF+ LGT ++S D +
Sbjct: 106 TGS-KYLASASDDKTIRIWDFEKRCSVRC---LKGHTNYVSSIDFNPLGTLLVSGSWDET 161
Query: 126 LKLWDL 131
+++W+L
Sbjct: 162 VRIWNL 167
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 361 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 416
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 417 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 455
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 361 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 416
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 417 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 455
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 361 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 416
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 417 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 455
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 363 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 418
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 419 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 457
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 364 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 419
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 420 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 458
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDEVLS 107
+R++ GH LKF P+ +L+LS DHT+++W+ D C+ F +GH + +
Sbjct: 155 IRNYPGHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLRDF---QGHNKPIKA 211
Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
F +S D S+K+WD ++K
Sbjct: 212 LRFTEDCQSFLSSSFDRSVKIWDTETGKVK 241
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 376 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 431
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 432 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 470
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 376 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 431
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 432 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 470
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 376 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 431
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 432 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 470
>UNIPROTKB|Q5ZK69 [details] [associations]
symbol:PAAF1 "Proteasomal ATPase-associated factor 1"
species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000502 CTD:80227
HOGENOM:HOG000006858 HOVERGEN:HBG056033 KO:K11887 OrthoDB:EOG41VK31
EMBL:AJ720215 IPI:IPI00587175 RefSeq:NP_001026006.1
UniGene:Gga.22242 ProteinModelPortal:Q5ZK69 STRING:Q5ZK69
GeneID:419061 KEGG:gga:419061 InParanoid:Q5ZK69 NextBio:20822172
Uniprot:Q5ZK69
Length = 392
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 9 IEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQD 68
I + TC +D+ SG L + ++I+ A R GH + +N +F P
Sbjct: 90 IHQKSITC---LDISSGGGLGVSTSTDGTMKIWQAANGEIRRLLEGHVYDVNCCRFFPSG 146
Query: 69 FNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKL 128
++LS D L++W+ + C+ F +GH+ +L G ++SC D + +L
Sbjct: 147 L-VVLSGGMDAQLKIWSAEDASCVVTF---KGHKGGILDTAIVDRGRNVLSCSRDGTARL 202
Query: 129 WDLTK 133
WD K
Sbjct: 203 WDCGK 207
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGH 700
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ + G ++GH D V S F G + S MD++++LWD K +D + +T
Sbjct: 701 GLMV---GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDVETDDFTTAT 756
Query: 149 ARSTRPFDTQK 159
P ++Q+
Sbjct: 757 GHINLPENSQE 767
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 540 YGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 595
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 596 YGYYFVSGGHDRVARLW 612
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH +N +FHP N + + S D T+RLW++ C+
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 662
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 663 RIF---TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 682 RFLATGATDGRVLLWDI 698
>TAIR|locus:2020285 [details] [associations]
symbol:AT1G04140 "AT1G04140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 UniGene:At.21104
UniGene:At.66834 IPI:IPI00545923 RefSeq:NP_849587.1
ProteinModelPortal:F4I458 SMR:F4I458 PRIDE:F4I458
EnsemblPlants:AT1G04140.2 GeneID:839272 KEGG:ath:AT1G04140
OMA:CIRTHDF Uniprot:F4I458
Length = 793
Score = 128 (50.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 44/170 (25%), Positives = 70/170 (41%)
Query: 1 MSTRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAIN 60
+S +Y L+ T A + + GR L + G V +I C++ GH
Sbjct: 92 LSAKYCPLVPPPRSTIAAAFSSD-GRTLASTHGDHTV-KIIDCETGKCLKILTGHRRTPW 149
Query: 61 ELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSC 120
++FHP+ ++ S S DH +RLWN KT CI + +R + S F G ++++
Sbjct: 150 VVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRTH---DFYRP-IASIAFHA-GGELLAV 204
Query: 121 GMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRDI 170
H L +W K D A + RS R P T ++
Sbjct: 205 ASGHKLHIWHYNKGG--DDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEV 252
Score = 44 (20.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 252 VWDLDVQDPSSIKFQILSHPRCMSAVRQTTL 282
VW D++DP SI L +C + L
Sbjct: 561 VWSHDIKDPCSI----LKSDKCRLTIHHAVL 587
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/110 (22%), Positives = 59/110 (53%)
Query: 38 IRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGG 97
I+I++P ++ F H + I + P++ +L SVS D TL++W+ + + +
Sbjct: 129 IKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSL---NT 185
Query: 98 VEGHRDEVLSADFDLLGTK-IMSCGMDHSLKLWDLTKPEIKDACAESYTF 146
++ H E+L+ D++ K +++ +D ++++WD+ P+ +T+
Sbjct: 186 IKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTY 235
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 50 RHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
+ YGH H I+++ D N LS S D TLRLW++ F EGH +VLS
Sbjct: 58 KRLYGHSHFISDVVLS-SDGNYALSGSWDQTLRLWDLAAGKTTRRF---EGHTKDVLSVA 113
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
F +I+S D ++KLW+ T E K
Sbjct: 114 FSADNRQIVSGSRDKTIKLWN-TLAECK 140
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 30 AVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
A++GS +R++ A R F GH + + F D ++S S+D T++LWN
Sbjct: 79 ALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSA-DNRQIVSGSRDKTIKLWNTLA 137
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTK--IMSCGMDHSLKLWDLTKPEIKD 138
+ I +GH D V F + I+SCG D ++K+W+L ++K+
Sbjct: 138 ECKFTI--QEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKN 187
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 56/232 (24%), Positives = 94/232 (40%)
Query: 54 GHGHAINELKFHPQDFNL---LLSVSKDHTLRLW--NIKTDICIAIFGGVEGHRDEVLSA 108
GH + ++ + +D NL LLS S D T+ LW N++ + A+ GH V S
Sbjct: 138 GHTDVVKDVAWVKKD-NLSCLLLSSSMDQTILLWEWNVERNKVKALHC-CRGHAGSVDSI 195
Query: 109 DFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTR 168
D GTK S D LK+W + +D E T P + + P T
Sbjct: 196 AVDSTGTKFCSGSWDKMLKIWSAVPTDEEDELEEP-TNRPRKKQKTEQLGLTRTP-IVTL 253
Query: 169 DIHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CE 226
H+ + V W + + S S ++ I W +E L++ T + N +++ C
Sbjct: 254 SGHKEAISSVLWSDAEEICSASWDHTIRVWD---VESGSLKSTLTGNKVFNCISYSPLC- 309
Query: 227 IWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR 278
K LA G+ +WD +D S + + SH +++++
Sbjct: 310 ------------KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLK 349
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AG ++++ H V+H+ H A+N L FHP N L++ S D
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG-NYLITASSDS 251
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ + + GH+ + F G S G D + +W
Sbjct: 252 TLKILDLMEG---RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
LL A ++++S + H + + KF P D L++S S D T++LW+
Sbjct: 117 LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKT 175
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
+ C+ + E H V DF GT I + GMD+++K+WD
Sbjct: 176 SRECVHSY--CE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 123 (48.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 50/240 (20%), Positives = 96/240 (40%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+G+ +LA AG+ V+R+++ AC+ + GHGH I +L D S D +++
Sbjct: 25 TGKYVLA-AGNERVVRLWNVKSGACIHEYAGHGHEILDLDL-VYDSTKFASCGGDKFIQV 82
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES 143
W++ T GG H ++ + ++ + + S D ++LWD
Sbjct: 83 WDVNTGKVDRRLGG---HLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPI---Q 136
Query: 144 YTFNPARSTRPFDTQKEHF-------PQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIIC 196
+ S D EH T DI + + + K+ ++
Sbjct: 137 VLADAKDSVSSIDIA-EHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKTSKSASFS 195
Query: 197 WKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLD 256
L ET + + + K+ E + +R S + + I+ G++ G+ Y+WDL+
Sbjct: 196 LISSLNSSIHLLDQETGKILKSYIGLKNME-YRVRSSFNQSETIVFSGSEDGKVYLWDLE 254
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 59 INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIM 118
IN +K++ + +L+ + +RLWN+K+ CI + G GH E+L D TK
Sbjct: 17 INVVKYN-RTGKYVLAAGNERVVRLWNVKSGACIHEYAG-HGH--EILDLDLVYDSTKFA 72
Query: 119 SCGMDHSLKLWDLTKPEI 136
SCG D +++WD+ ++
Sbjct: 73 SCGGDKFIQVWDVNTGKV 90
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGH 701
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ + G ++GH D V S F G + S MD++++LWD K +D + +T
Sbjct: 702 GLMV---GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETDDFTTAT 757
Query: 149 ARSTRPFDTQK 159
P ++Q+
Sbjct: 758 GHINLPENSQE 768
Score = 123 (48.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 541 YGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 596
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 597 YGYYFVSGGHDRVARLW 613
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH +N +FHP N + + S D T+RLW++ C+
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 663
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 664 RIF---TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 683 RFLATGATDGRVLLWDI 699
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGH 701
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ + G ++GH D V S F G + S MD++++LWD K +D + +T
Sbjct: 702 GLMV---GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETDDFTTAT 757
Query: 149 ARSTRPFDTQK 159
P ++Q+
Sbjct: 758 GHINLPENSQE 768
Score = 123 (48.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 541 YGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 596
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 597 YGYYFVSGGHDRVARLW 613
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH +N ++HP N + + S D T+RLW++ C+
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNS-NYVATGSADRTVRLWDVLNGNCV 663
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 664 RIF---TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 43 (20.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 683 RFLATGATDGRVLLWDI 699
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 31 VAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89
V+GS ++I+ PA ++ GH + L F P D LL S S D+T+ LW+ T
Sbjct: 766 VSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP-DGKLLASGSYDNTIDLWDSATG 824
Query: 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
+ F EGH + S F G ++ S D ++K+WDL E++
Sbjct: 825 ELLQTF---EGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQ 869
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
LA + +++++PA ++ GH ++ + F P D L S S D T++LWN T
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP-DGKQLASSSSDTTIKLWNSTT 991
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
F +GH + + F G ++S D+++KLWDL E++ + +
Sbjct: 992 GELQQTF---KGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVH 1048
Query: 149 ARSTRPFDTQ 158
A + P D Q
Sbjct: 1049 AVAFSPDDKQ 1058
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 25 GRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84
GR LLA + A I+++ P + GH + I L F P LL S S D T++LW
Sbjct: 209 GR-LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNG-QLLASGSSDATIKLW 266
Query: 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
+ T + ++GH D VLS F + S D+++KLWD
Sbjct: 267 DTATG---SFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 55/236 (23%), Positives = 95/236 (40%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
LLA A ++I+ A R GH ++ + F D L+ S S D T+R+W
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWETT 377
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIK------DACA 141
T + F E H D V++ F ++ S ++K+WD ++ D C
Sbjct: 378 TGLLRHTF---EDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCV 434
Query: 142 ESYTFNP-ARS-TRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKP 199
S +F+P +R D + +T + R W+ V S ++ +I
Sbjct: 435 NSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSH--DSRLIA--- 489
Query: 200 GRLEDKELRTNET-NVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD 254
+D ++ +T V + N L D + + FS D ++LA + +WD
Sbjct: 490 SASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD--SRLLASASDDMTVKIWD 543
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85
+PL G + +++ + GH + FH ++ +LS S D T+R+WN
Sbjct: 65 QPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFH-HEYPWILSCSDDQTIRIWN 123
Query: 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAES 143
++ CIAI + GH V+ A F I+S +D ++++WD++ +K+A S
Sbjct: 124 WQSRNCIAI---LTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVS 178
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 640 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGH 698
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ + G ++GH D V S F G + S MD++++LWD K +D + +T
Sbjct: 699 GLMV---GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA-FEDLETDDFTTAT 754
Query: 149 ARSTRPFDTQK 159
P ++Q+
Sbjct: 755 GHINLPENSQE 765
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 538 YGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 593
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 594 YGYYFVSGGHDRVARLW 610
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH +N +FHP N + + S D T+RLW++ C+
Sbjct: 602 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 660
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 661 RIF---TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 680 RFLATGATDGRVLLWDI 696
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 26 RPLLAVAGSRAVIRIFSPAFHACVRH---FYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
+PLLAV + +R+F + + R +GH AI + F P NL+ S S+D ++
Sbjct: 1795 QPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSG-NLIASTSEDLLIK 1853
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGT-KIMSCGMDHSLKLW 129
+WN++T A + + H D + F+ +++SC D+S K+W
Sbjct: 1854 VWNVQTHK--AEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVW 1899
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 46 HACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK-TDICIAIFGGVEGHRDE 104
+ CV GH + ++ +HPQ+ +LL S S D+T+R++ D + +E H
Sbjct: 143 YECVAVLNGHTQDVKKVCWHPQE-DLLASASYDNTIRMYRQDLADSEWEMLEPLESHSST 201
Query: 105 VLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
V S FD G ++ SC D ++K+W P+
Sbjct: 202 VWSISFDATGQRLASCSEDTTVKVWQQYGPD 232
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 124 (48.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 39 RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGG 97
+ F P H + + GH I+ +++ P+ +LLLS S D ++LW + + CI F G
Sbjct: 270 KCFLPKAH--IHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSG 327
Query: 98 VEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
HR + ++ GT +S D +KLWD
Sbjct: 328 ---HRQAIKDIAWNNRGTNFLSASYDRYIKLWD 357
Score = 43 (20.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 232 FSMDYWQKILAVGNQSGRTYVWD 254
FS D L G+ G+ Y+WD
Sbjct: 513 FSPD--MSYLVSGDGDGKCYIWD 533
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGH 700
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ + G ++GH D V S F G + S MD++++LWD K +D + +T
Sbjct: 701 GLMV---GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA-FEDLETDDFTTAT 756
Query: 149 ARSTRPFDTQK 159
P ++Q+
Sbjct: 757 GHINLPENSQE 767
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 540 YGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 595
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 596 YGYYFVSGGHDRVARLW 612
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH +N +FHP N + + S D T+RLW++ C+
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 662
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 663 RIF---TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 682 RFLATGATDGRVLLWDI 698
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
+M + LLA G +R++ HF G ++ + FHP LLL S +
Sbjct: 114 TMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAA 173
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D ++R+W+++ C+A+ + H V S F G ++S G D +WDL
Sbjct: 174 DTSIRVWSLQERSCLAV---LTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 224
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH + ++F P D +L + S D T++LW ++ C+ F EGH VL F
Sbjct: 517 FSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTF---EGHDASVLKVAFV 572
Query: 112 LLGTKIMSCGMDHSLKLWDLTKPE 135
GT+++S G D LKLW + E
Sbjct: 573 SRGTQLLSSGSDGLLKLWTIKNNE 596
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
W + +LA A + I++++ +C++ F GH ++ ++ F + LL S S
Sbjct: 525 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGS- 583
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW-DLTKPE 135
D L+LW IK + C+ ++ H D+V L + ++ D + LW D+T+ E
Sbjct: 584 DGLLKLWTIKNNECVRT---LDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAE 639
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLL-SVSK 77
+M + LLA G +R++ HF G ++ + FHP LLL S +
Sbjct: 114 TMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAA 173
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
D ++R+W+++ C+A+ + H V S F G ++S G D +WDL
Sbjct: 174 DTSIRVWSLQERSCLAV---LTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 224
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH + ++F P D +L + S D T++LW ++ C+ F EGH VL F
Sbjct: 517 FSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTF---EGHDASVLKVAFV 572
Query: 112 LLGTKIMSCGMDHSLKLWDLTKPE 135
GT+++S G D LKLW + E
Sbjct: 573 SRGTQLLSSGSDGLLKLWTIKNNE 596
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 18 WSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSK 77
W + +LA A + I++++ +C++ F GH ++ ++ F + LL S S
Sbjct: 525 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGS- 583
Query: 78 DHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW-DLTKPE 135
D L+LW IK + C+ ++ H D+V L + ++ D + LW D+T+ E
Sbjct: 584 DGLLKLWTIKNNECVRT---LDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAE 639
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85
R +++ +G R I+++S VR GH I L++ + L++S S D+T+RLW+
Sbjct: 356 RYIVSASGDRT-IKVWSMDTLEFVRTLAGHRRGIACLQYRGR---LVVSGSSDNTIRLWD 411
Query: 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
I + +C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 412 IHSGVCLRV---LEGHEELVRCIRFD--EKRIVSGAYDGKIKVWDL 452
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 66/255 (25%), Positives = 107/255 (41%)
Query: 31 VAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89
V+G R I+I+ ++C R GH ++ L++ D +++S S D T+R+W+++T
Sbjct: 236 VSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY---DNRVIISGSSDATVRVWDVETG 292
Query: 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPE---IKD------A 139
CI + H + VL F IM +C D S+ +WD+ P I+ A
Sbjct: 293 ECIKTL--IH-HCEAVLHLRF---ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 140 CAESYTFNP-----ARSTRPFDTQKEHFPQF-STRDIHRNYVDCVRWLGDFVLSKSCENC 193
F+ A R +F T HR + C+++ G V+S S +N
Sbjct: 347 AVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNT 406
Query: 194 IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVW 253
I W LR E + ++ C IRF +K + G G+ VW
Sbjct: 407 IRLWDIH--SGVCLRVLEGHEELVR------C----IRFD----EKRIVSGAYDGKIKVW 450
Query: 254 DLDVQ-DPSSIKFQI 267
DL DP ++ +I
Sbjct: 451 DLQAALDPRALSSEI 465
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 26 RPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWN 85
R +++ +G R I+++S VR GH I L++ + L++S S D+T+RLW+
Sbjct: 356 RYIVSASGDRT-IKVWSMDTLEFVRTLAGHRRGIACLQYRGR---LVVSGSSDNTIRLWD 411
Query: 86 IKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
I + +C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 412 IHSGVCLRV---LEGHEELVRCIRFD--EKRIVSGAYDGKIKVWDL 452
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 66/255 (25%), Positives = 107/255 (41%)
Query: 31 VAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89
V+G R I+I+ ++C R GH ++ L++ D +++S S D T+R+W+++T
Sbjct: 236 VSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY---DNRVIISGSSDATVRVWDVETG 292
Query: 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIM-SCGMDHSLKLWDLTKPE---IKD------A 139
CI + H + VL F IM +C D S+ +WD+ P I+ A
Sbjct: 293 ECIKTL--IH-HCEAVLHLRF---ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 140 CAESYTFNP-----ARSTRPFDTQKEHFPQF-STRDIHRNYVDCVRWLGDFVLSKSCENC 193
F+ A R +F T HR + C+++ G V+S S +N
Sbjct: 347 AVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNT 406
Query: 194 IICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVW 253
I W LR E + ++ C IRF +K + G G+ VW
Sbjct: 407 IRLWDIH--SGVCLRVLEGHEELVR------C----IRFD----EKRIVSGAYDGKIKVW 450
Query: 254 DLDVQ-DPSSIKFQI 267
DL DP ++ +I
Sbjct: 451 DLQAALDPRALSSEI 465
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
Y H H + KF P D L++S S+D T+++W+ C+ F G + V DF+
Sbjct: 11 YRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNP 66
Query: 113 LGTKIMSCGMDHSLKLWDL 131
GT I S G D ++K+WD+
Sbjct: 67 SGTCIASAGSDQTVKVWDV 85
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AGS ++++ + ++H+ H +N + FHP N L++ S D
Sbjct: 62 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG-NYLITASSDG 120
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ I ++GH V + F G S G D + LW
Sbjct: 121 TLKILDLLEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/105 (25%), Positives = 53/105 (50%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +RH++GH A+ L HP ++L + +D T R+W++
Sbjct: 227 PYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPT-IDVLATSGRDSTARIWDM 285
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
+T + + GH + V S +I++ D +++LWDL
Sbjct: 286 RTKANVHT---LTGHTNTVASVVAQATNPQIITGSHDSTVRLWDL 327
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 402 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGH 460
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
+ + G ++GH D V S F G + S MD++++LWD K
Sbjct: 461 GLMV---GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
Score = 123 (48.4 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 300 YGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 355
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 356 YGYYFVSGGHDRVARLW 372
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH +N +FHP N + + S D T+RLW++ C+
Sbjct: 364 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCV 422
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 423 RIF---TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 442 RFLATGATDGRVLLWDI 458
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 56/231 (24%), Positives = 92/231 (39%)
Query: 54 GHGHAINELKFHPQDFN--LLLSVSKDHTLRLW--NIKTDICIAIFGGVEGHRDEVLSAD 109
GH + ++ + +D LLL+ S D T+ LW NI+ + A+ GH V +
Sbjct: 138 GHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHC-CRGHAGSVDAIA 196
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNPARSTRPFDTQKEHFPQFSTRD 169
D GTK S D LK+W + +D E T P + + P T
Sbjct: 197 VDSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEP-TNRPRKKQKTEQLGLTRTP-LVTLS 254
Query: 170 IHRNYVDCVRWL-GDFVLSKSCENCIICWKPGRLEDKELRTNETNVTIINRLNFKD-CEI 227
H + V W D V S S ++ + W +E L++ T + N +++ C
Sbjct: 255 GHTEAISSVLWSDADEVCSASWDHTVRVWD---VESGGLKSTLTGNKVFNCISYSPLC-- 309
Query: 228 WFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMSAVR 278
K LA G+ +WD +D S + + SH +++V+
Sbjct: 310 -----------KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVK 349
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 65/248 (26%), Positives = 99/248 (39%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVS 76
++ G LLA G ++++ C G I ++F + LL+ S
Sbjct: 327 AVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAG-SYLLAAS 385
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPE 135
D R+W + + + GH +VLSA F L +I+S D +LKLWDL +K
Sbjct: 386 NDFASRIWTVDD---YRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC 442
Query: 136 IKDACAESYTFNPARSTRPFDTQKEHFPQ----FSTRDIHRNYVDCVRWLGDFVLSK--- 188
IK A S + N T HF + + R R+ V + LG S+
Sbjct: 443 IKTVFAGS-SCNDIVCTEQC-VMSGHFDKKIRFWDIRYNTRSLVSLGQLLGKQTASRFNP 500
Query: 189 SCENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF-IRFSMDYWQKILAVGNQS 247
+ C + L+ +LR N T + FK W + FS D +A G+
Sbjct: 501 ERTELLSCSRDDLLKIIDLRINAVRQTF-SAPGFKCGSDWTRVVFSPD--GSYVAAGSAE 557
Query: 248 GRTYVWDL 255
G YVW +
Sbjct: 558 GSLYVWSV 565
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 340 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 395
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 396 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 434
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 340 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 395
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 396 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 434
>UNIPROTKB|Q756Z9 [details] [associations]
symbol:AER114W "Coronin" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0005826 "actomyosin contractile ring" evidence=ISS]
[GO:0005885 "Arp2/3 protein complex" evidence=ISS] [GO:0030479
"actin cortical patch" evidence=ISS] [GO:0034316 "negative
regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007015 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051015
GO:GO:0030479 GO:GO:0005826 GO:GO:0051666 GO:GO:0034316
GO:GO:0007017 GO:GO:0005885 EMBL:AE016818 GenomeReviews:AE016818_GR
HOGENOM:HOG000166356 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
OrthoDB:EOG4TJ02B GO:GO:2000601 RefSeq:NP_984974.1
ProteinModelPortal:Q756Z9 STRING:Q756Z9 EnsemblFungi:AAS52798
GeneID:4621179 KEGG:ago:AGOS_AER114W OMA:GEPLISM PhylomeDB:Q756Z9
Uniprot:Q756Z9
Length = 633
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 47 ACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVL 106
A V+ GH + + +HP +L S S DHT+RLWN++ + H D V
Sbjct: 131 APVKFLTGHQRKVGHVLYHPTAQGVLASSSLDHTVRLWNVEQGTNPIVLT----HPDMVT 186
Query: 107 SADFDLLGTKIMSCGMDHSLKLWDLTKPEI 136
S F GT + + D L++WD+ K E+
Sbjct: 187 SMSFSYGGTYLATVCRDKMLRVWDIRKGEV 216
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 126 (49.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 24 SGRPLLAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
S + L VAGS++ IR++ +R GH I L FHP + + S S D ++
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIK 130
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI 136
LW+++ CI + + H V F G + S DH++KLWDLT ++
Sbjct: 131 LWDVRRKGCIFKY---KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 181
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+GR LLA G + ++S CV GH I L+ ++ L+++ S+ ++R+
Sbjct: 32 TGR-LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G+ + S +D +KLWD+ +
Sbjct: 90 WDLEA---AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 116 (45.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
LLA + I+I+ + + H + +L F P +L+S S+D TLR+W++K
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
D + + GH++ V S F + + S G ++ LWD+ K
Sbjct: 202 DDG--NMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDK 245
Score = 47 (21.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 232 FSMDYWQKILAVGNQSGRTYVWDLDVQDPS 261
FS D +LA G G Y W Q PS
Sbjct: 359 FSTD--GSVLAAGTHDGSVYFWATPRQVPS 386
Score = 45 (20.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 215 TIINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWD 254
T+I +L ++ FS D +LA + R Y+WD
Sbjct: 247 TMIRKLEGHHHDVVACDFSPD--GALLATASYDTRVYIWD 284
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 24 SGRPLLAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
S + L VAGS++ IR++ +R GH I L FHP + + S S D ++
Sbjct: 71 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIK 129
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI 136
LW+++ CI + + H V F G + S DH++KLWDLT ++
Sbjct: 130 LWDVRRKGCIFKY---KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 180
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 132 (51.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 26 RPLLAVAGSRAVIRIFS-PAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLW 84
+PL+ + +I++++ AC R F GH H + ++ F+P+D N S S D T+++W
Sbjct: 111 QPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVW 170
Query: 85 NIKTDICIAIFGGVEGHRDEVLSADFDLLGTK--IMSCGMDHSLKLWD 130
+ ++ A F +EGH V D+ G K ++S D +K+WD
Sbjct: 171 QLGSNF--ANFT-LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 202 LEDKELRTNETNVTIINRLNFKDCEIWFIRFSMD--YWQKILAVGNQSGRT-YVWD 254
LE E E N T+ NFK+ + + + + Y V SG Y W+
Sbjct: 400 LESNEYAIRENNGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWE 455
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 24 SGRPLLAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
S + L VAGS++ IR++ +R GH I L FHP + + S S D ++
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIK 130
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI 136
LW+++ CI + + H V F G + S DH++KLWDLT ++
Sbjct: 131 LWDVRRKGCIFKY---KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 181
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+GR LLA G + ++S CV GH I L+ ++ L+++ S+ ++R+
Sbjct: 32 TGR-LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G+ + S +D +KLWD+ +
Sbjct: 90 WDLEA---AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 24 SGRPLLAVAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
S + L VAGS++ IR++ +R GH I L FHP + + S S D ++
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIK 130
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEI 136
LW+++ CI + + H V F G + S DH++KLWDLT ++
Sbjct: 131 LWDVRRKGCIFKY---KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 181
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
+GR LLA G + ++S CV GH I L+ ++ L+++ S+ ++R+
Sbjct: 32 TGR-LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE-ELIVAGSQSGSIRV 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF G+ + S +D +KLWD+ +
Sbjct: 90 WDLEA---AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 121 (47.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 32 AGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDIC 91
A ++++ + ++ GH + + F+PQ N+++S S D T+R+W++ T C
Sbjct: 89 ASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS-NMIVSGSFDETVRIWDVTTGKC 147
Query: 92 IAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
+ + + H D V + DF+ G+ I+S D ++WD
Sbjct: 148 LKV---LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 119 (46.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFS-----PAFHACVRHFYGHGHAINELKFHPQDFNLLL 73
S+ S LLA A + IR ++ V+ F GH + I+++ F D ++
Sbjct: 29 SVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFS-SDARFIV 87
Query: 74 SVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
S S D TL+LW+++T I + GH + +F+ I+S D ++++WD+T
Sbjct: 88 SASDDKTLKLWDVETGSLIKT---LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 182 GDFVLSKSCENCIICWKPGRLEDKEL 207
G ++S S +NC+ W+ L K+L
Sbjct: 255 GKRIVSGSEDNCVHMWE---LNSKKL 277
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 121 (47.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+ + LL A I+I+ + GHG + + F P D + + S S D
Sbjct: 195 SLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSS-SSD 253
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
++++W++ C+ F H+D+V ++ G+KI+S G D + ++D
Sbjct: 254 KSVKVWDVSARTCVHTF---LDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A S +R++ CVR F GH I+ L F P L S S D + LW+I
Sbjct: 598 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG-KFLASGSTDGRVLLWDIGH 656
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ IA ++GH + + F G I S +D++++LWD+ + I D + +T
Sbjct: 657 GLMIA---ELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRA-IDDVETDDFTAAT 712
Query: 149 ARSTRPFDTQK 159
P ++Q+
Sbjct: 713 GHIHLPDNSQE 723
Score = 122 (48.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
+GH + + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 496 HGHSGPVYGVSFSP-DRNYLLSSSEDGTIRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 551
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 552 FGYYFVSGGHDRVARLW 568
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH + +FHP N + + S D T+RLW++ C+
Sbjct: 560 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS-NYVATGSSDRTVRLWDVLNGNCV 618
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + S D + LWD+
Sbjct: 619 RIF---TGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Score = 47 (21.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 239 KILAVGNQSGRTYVWDL 255
K LA G+ GR +WD+
Sbjct: 638 KFLASGSTDGRVLLWDI 654
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 398 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 453
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 454 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 492
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 403 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 458
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 459 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 497
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 125 (49.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 30/130 (23%), Positives = 61/130 (46%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +R ++GH + L HP +LL+S +D +R+W+I
Sbjct: 341 PYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPS-LDLLMSGGRDAVVRVWDI 399
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146
+T + + + GH V+S + +++S D ++LWDL + + +
Sbjct: 400 RTKSSVFV---LSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKS 456
Query: 147 NPARSTRPFD 156
+ S PF+
Sbjct: 457 IRSLSIHPFE 466
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 125 (49.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 30/130 (23%), Positives = 61/130 (46%)
Query: 27 PLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
P L G ++ + ++ +R ++GH + L HP +LL+S +D +R+W+I
Sbjct: 341 PYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPS-LDLLMSGGRDAVVRVWDI 399
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTF 146
+T + + + GH V+S + +++S D ++LWDL + + +
Sbjct: 400 RTKSSVFV---LSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKS 456
Query: 147 NPARSTRPFD 156
+ S PF+
Sbjct: 457 IRSLSIHPFE 466
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 37/118 (31%), Positives = 56/118 (47%)
Query: 17 AWSMDLESGR-PLLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLS 74
A+S+D R L V+GS +++ PA +R F GH I + P S
Sbjct: 112 AYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFAS 171
Query: 75 VSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKLWDL 131
S D TLR+W++K + + H+ E+LS D+ ++ G +D SLK WDL
Sbjct: 172 ASGDQTLRIWDVKAPGVRLV---IPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDL 226
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 439 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 494
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 495 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 533
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 439 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 494
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 495 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 533
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 439 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 494
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 495 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 533
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 439 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 494
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 495 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 533
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I++++ + VR GH I L++ + L++S S D+T+RLW+I+
Sbjct: 439 IVSASGDRT-IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 494
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +EGH + V FD +I+S D +K+WDL
Sbjct: 495 CGACLRV---LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 533
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 38/137 (27%), Positives = 68/137 (49%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+++ +G R I+++S + VR GH I L++ + L++S S D+++RLW+I+
Sbjct: 346 IVSASGDRT-IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNSIRLWDIE 401
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFN 147
C+ + +EGH + V FD +I+S D +K+WDL A + + N
Sbjct: 402 CGACLRV---LEGHEELVRCIRFDT--KRIVSGAYDGKIKVWDLVAALDPRAASNTLCLN 456
Query: 148 PA--RSTRPFDTQKEHF 162
+ R F Q + F
Sbjct: 457 TLVEHTGRVFRLQFDEF 473
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 132 (51.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +P+ AG I+++S + C+ GH + + FH ++ ++S S D
Sbjct: 59 LDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFH-RELPWIISASDDQ 117
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT 132
T+R+WN + IA + GH V+ A F I+S +D ++++WD++
Sbjct: 118 TIRIWNWQNRKEIAC---LTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDIS 167
Score = 40 (19.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 240 ILAVGNQSGRTYVWDLDVQDP 260
I++VG VWDLD + P
Sbjct: 268 IISVGEDK-TLRVWDLDKRTP 287
>ASPGD|ASPL0000074293 [details] [associations]
symbol:AN4800 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001303 EMBL:AACD01000081 KO:K11801 RefSeq:XP_662404.1
ProteinModelPortal:Q5B3T0 EnsemblFungi:CADANIAT00005621
GeneID:2872599 KEGG:ani:AN4800.2 HOGENOM:HOG000194480 OMA:KSSPHIL
OrthoDB:EOG4NCQND Uniprot:Q5B3T0
Length = 660
Score = 112 (44.5 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 39/148 (26%), Positives = 65/148 (43%)
Query: 18 WSMDLES-GRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF-NLLLSV 75
WS+ GR ++A G +VI ++ V H +N + F + ++L S
Sbjct: 339 WSVRFSGDGREIVAGTGDHSVI-VYDLETRQSVLRIRNHEDDVNAVCFGDKSSPHILYSG 397
Query: 76 SKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPE 135
S D T+R+W+ ++ G GH + + D G ++S D ++KLWDL K
Sbjct: 398 SDDSTVRVWDRRSMADGREAGVFVGHTEGLTYVDSKGDGRYVLSNSKDQTMKLWDLRKMM 457
Query: 136 IKDACAESYTFNPARSTRPFDTQKEHFP 163
+ A+ T P FD + + FP
Sbjct: 458 ---STAKFDTLEPTSYGTGFDYRFDPFP 482
Score = 56 (24.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 244 GNQSGRTYVWDLDVQDPSSIKFQILSH 270
G++ G+ YVW+LD ++ Q +H
Sbjct: 526 GSEDGKVYVWNLDATLAGTVDVQKATH 552
>ASPGD|ASPL0000077901 [details] [associations]
symbol:AN4648 species:162425 "Emericella nidulans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 GO:GO:0030529 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK
RefSeq:XP_662252.1 ProteinModelPortal:Q5B482 STRING:Q5B482
EnsemblFungi:CADANIAT00005783 GeneID:2872446 KEGG:ani:AN4648.2
OrthoDB:EOG4T4H3P Uniprot:Q5B482
Length = 541
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 41/160 (25%), Positives = 68/160 (42%)
Query: 3 TRYSLLIEENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINEL 62
TR L F A D+ +L +++F A ++ + H +
Sbjct: 85 TRKLLRTITRFDDTARGTDVRPDGRILVAGDDTGTLQVFDVGSRAILKTWKDHKQPVWVA 144
Query: 63 KFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADF---DLLGT-KIM 118
KF P D +LS S D T+RLW++ ++ I F GH D V +A F L + ++
Sbjct: 145 KFSPSDPTCVLSASDDRTVRLWDLPSENSIKSF---VGHSDYVRTAAFMPGSLASSGSLV 201
Query: 119 SCGMDHSLKLWDLTKPEIKDACAESYTFN-PARSTRPFDT 157
S D +++LWD P ++ A ++ P + P T
Sbjct: 202 SGSYDRTVRLWD---PRMEGRSAMTFKMGAPLETVLPMPT 238
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 120 (47.3 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
S+ LL A I+I+ GHG + + F P D + + S S D
Sbjct: 195 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSS-SSD 253
Query: 79 HTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
++++W+ + C+ F H+D+V S ++ G+KI+S G D ++ ++D
Sbjct: 254 KSIKVWDTSSRSCVNTFFD---HQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 31/110 (28%), Positives = 57/110 (51%)
Query: 24 SGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRL 83
SGR LLA G + I++ + C+ GH A+ ++F+ + ++ S +LRL
Sbjct: 32 SGR-LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAG-SLSGSLRL 89
Query: 84 WNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
W+++ I + GH+ + S DF +G + S +D ++KLWD+ +
Sbjct: 90 WDLEA---AKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 31 VAGSRA-VIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89
VAGS + +R++ +R GH +I+ L FHP L S S D ++LW+++
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG-EYLASGSVDSNIKLWDVRRK 137
Query: 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
C+ + +GH V F G + S D ++KLWDL
Sbjct: 138 GCVFRY---KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 124 (48.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 59/247 (23%), Positives = 98/247 (39%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRH--FYGHGHAINELKFHPQDFNLLLSVS 76
++ G LLA G ++++ C G I ++F + LL+ S
Sbjct: 327 AVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAG-SYLLAAS 385
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP-- 134
D R+W + + + + GH +VLSA F L +I+S D +LKLWDL
Sbjct: 386 NDFASRIWTVDDN---RLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC 442
Query: 135 EIK-----DACAESYTFNPARSTRPFDTQKEHFPQFSTRDIHRNYVDCVRWLGDFVLSKS 189
IK +C + + FD +K F T I + ++ + + L+
Sbjct: 443 NIKTVFAGSSCNDIVCTEQCVMSGHFD-KKIRFWDIRTESIVKE-LELLGRITALDLNSE 500
Query: 190 CENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF-IRFSMDYWQKILAVGNQSG 248
+ C + L+ +LR T + FK W + FS D +A G+ G
Sbjct: 501 RTELLTCSRDDLLKIIDLRVGAVKQTF-SAQGFKCGSDWTRVVFSPD--GNYVAAGSADG 557
Query: 249 RTYVWDL 255
YVW++
Sbjct: 558 ALYVWNV 564
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 120 (47.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI-KTDICIAIFGGVEGHRDEVLSADFDL 112
GH +AI +KF P ++L S S D T+R WN K D ++ VE H + DF L
Sbjct: 240 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD---SLLETVEHHTEFTCGLDFSL 296
Query: 113 LG-TKIMSCGMDHSLKLWD 130
T++ C D ++K++D
Sbjct: 297 QSPTQVADCSWDETIKIYD 315
Score = 111 (44.1 bits), Expect = 0.00092, P = 0.00092
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 11 ENFYTCAWSMDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ Y+ WS G L+ V+GS ++++ P + F GH I + P
Sbjct: 112 QEVYSVDWSQT--RGEQLV-VSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIP 168
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKL 128
S S D TLR+W++K + I + H+ E+LS D+ ++ G +D SL+
Sbjct: 169 GCFASASGDQTLRIWDVKA-AGVRIV--IPAHQAEILSCDWCKYNENLLVTGAVDCSLRG 225
Query: 129 WDL 131
WDL
Sbjct: 226 WDL 228
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 123 (48.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 52 FYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFD 111
F GH ++ ++ + D LL+S SKD TL++W+++T +++ + GH+DEV + D+
Sbjct: 440 FRGHVASVYQVAWS-SDCRLLVSCSKDTTLKVWDVRTRK-LSV--DLPGHKDEVYTVDWS 495
Query: 112 LLGTKIMSCGMDHSLKLW 129
+ G ++ S G D ++LW
Sbjct: 496 VDGKRVCSGGKDKMVRLW 513
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
MD+ L+A + ++I+ F C R + H ++ L+F P+ +L + KDH
Sbjct: 596 MDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKS-HLFFTAGKDH 654
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
++ W+ I +EGH E+ G ++S D SL+LW+ T+
Sbjct: 655 KIKQWDADKFEHIQT---LEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTR 705
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 29 LAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKT 88
+A + +R++ CVR F GH I+ L F P L + + D + LW+I
Sbjct: 622 IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG-RFLATGATDGRVLLWDIGH 680
Query: 89 DICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACAESYTFNP 148
+ + G ++GH D + + F G + S MD++++LWD K +D + +T
Sbjct: 681 GLMV---GELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETDDFTTAT 736
Query: 149 ARSTRPFDTQ 158
P ++Q
Sbjct: 737 GHINLPENSQ 746
Score = 124 (48.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 53 YGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDL 112
YGH + F P D N LLS S+D T+RLW+++T C+ G +GH V F
Sbjct: 520 YGHSGPVYGTSFSP-DRNYLLSCSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSP 575
Query: 113 LGTKIMSCGMDHSLKLW 129
G +S G D +LW
Sbjct: 576 YGYYFVSGGHDRVARLW 592
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 33 GSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICI 92
G V R+++ + +R F GH + +FHP N + + S D T+RLW++ C+
Sbjct: 584 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS-NYIATGSADRTVRLWDVLNGNCV 642
Query: 93 AIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL 131
IF GH+ + S F G + + D + LWD+
Sbjct: 643 RIF---TGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Score = 43 (20.2 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 239 KILAVGNQSGRTYVWDL 255
+ LA G GR +WD+
Sbjct: 662 RFLATGATDGRVLLWDI 678
>UNIPROTKB|Q6NVS5 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 CTD:25879 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF InterPro:IPR007287
Pfam:PF04158 EMBL:CR855579 EMBL:BC067929 RefSeq:NP_998858.1
UniGene:Str.7604 ProteinModelPortal:Q6NVS5 STRING:Q6NVS5
GeneID:407967 KEGG:xtr:407967 Xenbase:XB-GENE-5791289
InParanoid:Q6NVS5 Uniprot:Q6NVS5
Length = 445
Score = 95 (38.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 39 RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV 98
R+F+ F A + GH +N + HP+ + +LS + D +++WN+ C +
Sbjct: 52 RVFAKPFIASLD---GHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRT---I 105
Query: 99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP 134
+ H V GT + G D ++K W + P
Sbjct: 106 QAHDGFVRGLCVRFCGTSFFTVGDDKTVKQWSMESP 141
Score = 69 (29.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 27/86 (31%), Positives = 39/86 (45%)
Query: 122 MDHSLKLWDLT-KPEIKDACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIHRNYVDCVR 179
MDH + D+ P K+ + S+ +S R F Q H + + T+ + +V CVR
Sbjct: 279 MDHVSAVLDVDYSPTGKEFVSASFD----KSIRIFPVQSGHSREVYHTKRMQ--HVTCVR 332
Query: 180 WLGD--FVLSKSCENCIICWKPGRLE 203
W D +VL S E I WK E
Sbjct: 333 WSADNKYVLCGSDEMNIRIWKANASE 358
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AG ++++ H ++H+ H A+N L FHP N L++ S D
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSG-NYLITASSDS 251
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ + + GH+ + F G S G D + +W
Sbjct: 252 TLKILDLMEG---RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
L+A A +R++ + + F GH A+ + + D L++S SKD TL++W+++
Sbjct: 389 LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSA-DSRLIVSGSKDSTLKVWSVQ 447
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T + + GH DEV D+ G+++ S G D +KLW
Sbjct: 448 TK---KLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 29 LAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+ V GSR +R++ + +GH A+ ++F D ++S D T+++WN
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF---DGTTVVSGGYDFTVKIWNAH 406
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA 141
T CI + GH + V S F+ + + S +D S+++WD T+PE ++ A
Sbjct: 407 TGRCIRT---LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVA 457
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 29 LAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
+ V GSR +R++ + +GH A+ ++F D ++S D T+++WN
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF---DGTTVVSGGYDFTVKIWNAH 406
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKPEIKDACA 141
T CI + GH + V S F+ + + S +D S+++WD T+PE ++ A
Sbjct: 407 TGRCIRT---LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVA 457
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSA 108
+ H GH +++L FHP D +L + D R+W+++T C+ +F +EGH E+ S
Sbjct: 343 ILHQEGHSKGVHDLHFHP-DGSLAGTGGLDSFARVWDLRTGRCV-MF--LEGHIKEIYSI 398
Query: 109 DFDLLGTKIMSCGMDHSLKLWDL 131
+F G + + D++ K+WDL
Sbjct: 399 NFSPNGFHVATGSGDNACKVWDL 421
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 16 CAWSMDLE---SGRPLLAVAGSRAVIRIF---SP----AFHACVRHFYGHGHAINELKFH 65
CAW M SG+ + A G +V IF SP H R GH ++ ++
Sbjct: 107 CAWVMTCAFSPSGQSV-ACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYV 165
Query: 66 PQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV--EGHRDEVLSADFDLLGTKIMSCGM- 122
P + L++ S D T LW+I T + ++FGG GH +V S ++ G
Sbjct: 166 PDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSC 225
Query: 123 DHSLKLWD 130
D + +LWD
Sbjct: 226 DTTARLWD 233
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 239 KILAVGNQSGRTYVWD 254
++L VG +G YVWD
Sbjct: 308 RLLFVGYSNGDCYVWD 323
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKD 78
SMD+ LL + ++I+ F C + + H +I E+ F P +N + SKD
Sbjct: 581 SMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFF-TCSKD 639
Query: 79 HTLRLWNIKT-DICIAIFGGVEGHRDEVLSADFDLLG-TKIMSCGMDHSLKLWD 130
+R W+ K+ D+ + + GH EV + +G T ++S DHS++LW+
Sbjct: 640 REVRYWDGKSFDLILKL----RGHHSEVWAL---AVGPTFVVSGSHDHSIRLWE 686
>UNIPROTKB|Q7ZYQ6 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8355 "Xenopus laevis" [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:BC042261 RefSeq:NP_001080629.1 UniGene:Xl.21976
ProteinModelPortal:Q7ZYQ6 GeneID:380321 KEGG:xla:380321
Xenbase:XB-GENE-5791341 Uniprot:Q7ZYQ6
Length = 445
Score = 93 (37.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 39 RIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGV 98
R+F+ F A + GH +N + HP+ + +LS + D +++WN+ C +
Sbjct: 52 RVFAKPFIASLD---GHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRT---I 105
Query: 99 EGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTKP 134
+ H V GT + G D ++K W + P
Sbjct: 106 QAHDGFVRGLCVRFCGTSFFTVGDDKTVKQWAMESP 141
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/86 (31%), Positives = 39/86 (45%)
Query: 122 MDHSLKLWDLT-KPEIKDACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIHRNYVDCVR 179
MDH + D+ P K+ + S+ +S R F Q H + + T+ + +V CVR
Sbjct: 279 MDHVSAVLDVDYSPTGKELVSASFD----KSIRIFPVQSGHSREVYHTKRMQ--HVTCVR 332
Query: 180 WLGD--FVLSKSCENCIICWKPGRLE 203
W D +VL S E I WK E
Sbjct: 333 WSADNKYVLCGSDEMNIRIWKANASE 358
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 116 (45.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 51 HFY-GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSAD 109
H Y GH +N L++ P+ +L LS S D ++LW + + GH+ V
Sbjct: 269 HTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQ--RVVRTYAGHKLPVREVA 326
Query: 110 FDLLGTKIMSCGMDHSLKLWDLTKPEIK 137
F+ GT+ +S D +KLWD ++K
Sbjct: 327 FNNEGTEFLSASFDRYVKLWDTETGQVK 354
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 230 IRFSMDYWQKILAVGNQSGRTYVWD 254
I FS D Q L G+ G+ ++WD
Sbjct: 502 IDFSPD--QSFLISGDADGKLFIWD 524
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 33/114 (28%), Positives = 62/114 (54%)
Query: 24 SGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLR 82
SG + V+GS + IRI+ + C+ H GH I + + P+ N+ +S S D ++R
Sbjct: 514 SGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPER-NICISGSMDKSIR 572
Query: 83 LWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLT--KP 134
+W++ T C + +EGH D ++ ++ +++S D ++++WDL KP
Sbjct: 573 VWDLSTGTCKYV---LEGH-DAFVTL-LNVFQNRLISGSADSTIRIWDLNTGKP 621
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 64/246 (26%), Positives = 98/246 (39%)
Query: 19 SMDLESGRPLLAVAGSRAVIRIFSPAFHACV--RHFYGHGHAINELKFHPQDFNLLLSVS 76
++ G LLA G ++++ C G I ++F + LL+ S
Sbjct: 327 AVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAG-SYLLAAS 385
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDL-TKPE 135
D R+W + + + GH +VLSA F L +I+S D +LKLWDL +K
Sbjct: 386 NDFASRIWTVDD---YRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC 442
Query: 136 IKDACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIH-RNYVDCVRWLGDFV---LSKSC 190
IK A S + N T HF + DI + V + LG L+
Sbjct: 443 IKTVFAGS-SCNDIVCTEQC-VMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPER 500
Query: 191 ENCIICWKPGRLEDKELRTNETNVTIINRLNFKDCEIWF-IRFSMDYWQKILAVGNQSGR 249
+ C + L+ +LR N T + FK W + FS D +A G+ G
Sbjct: 501 TELLSCSRDDLLKIIDLRINAVRQTF-SAPGFKCGSDWTRVVFSPD--GGYVAAGSAEGS 557
Query: 250 TYVWDL 255
Y+W +
Sbjct: 558 LYIWSV 563
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AG ++++ H ++H+ H A+N L FHP N L++ S D
Sbjct: 155 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG-NYLITASSDS 213
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ + + GH+ + F G S G D + +W
Sbjct: 214 TLKILDLMEG---RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 65/256 (25%), Positives = 101/256 (39%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH AIN++ D LS S DH++RLW++ I F GH +V S F
Sbjct: 70 GHSQAINDVSIS-SDGLFALSGSWDHSVRLWDLSLGETIRSF---IGHTSDVFSVSFSPD 125
Query: 114 GTKIMSCGMDHSLKLWDLT---KPEIKDACAESYT----FNPARSTR-----PFDTQKEH 161
+I+S D ++KLW+ K I D + F+P+ + +D +
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 162 FPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPG--RL----EDKELRTNETNVT 215
+ D+++N L +S C K G +L E K L + ET T
Sbjct: 186 W-NLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST 244
Query: 216 IINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS 275
I N L F C+ W + + + + N + L + + +K + P C S
Sbjct: 245 I-NSLCFSPCDYWLCAAT----DRFIRIWNLESK-----LIISEIYPVKQSKIGVPWCTS 294
Query: 276 AVRQTTLSKNGNVLLC 291
T S NG +L C
Sbjct: 295 L----TWSANGQLLYC 306
Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 28 LLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
L A++GS +R++ + +R F GH + + F P D ++S S+D T++LWN
Sbjct: 85 LFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP-DNRQIVSASRDKTIKLWNT 143
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTK--IMSCGMDHSLKLWDL 131
I + H D + F + I+SCG D +K+W+L
Sbjct: 144 LAQCKYTITD--QQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL 188
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 65/256 (25%), Positives = 101/256 (39%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLL 113
GH AIN++ D LS S DH++RLW++ I F GH +V S F
Sbjct: 70 GHSQAINDVSIS-SDGLFALSGSWDHSVRLWDLSLGETIRSF---IGHTSDVFSVSFSPD 125
Query: 114 GTKIMSCGMDHSLKLWDLT---KPEIKDACAESYT----FNPARSTR-----PFDTQKEH 161
+I+S D ++KLW+ K I D + F+P+ + +D +
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 162 FPQFSTRDIHRNYVDCVRWLGDFVLSKSCENCIICWKPG--RL----EDKELRTNETNVT 215
+ D+++N L +S C K G +L E K L + ET T
Sbjct: 186 W-NLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST 244
Query: 216 IINRLNFKDCEIWFIRFSMDYWQKILAVGNQSGRTYVWDLDVQDPSSIKFQILSHPRCMS 275
I N L F C+ W + + + + N + L + + +K + P C S
Sbjct: 245 I-NSLCFSPCDYWLCAAT----DRFIRIWNLESK-----LIISEIYPVKQSKIGVPWCTS 294
Query: 276 AVRQTTLSKNGNVLLC 291
T S NG +L C
Sbjct: 295 L----TWSANGQLLYC 306
Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 28 LLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI 86
L A++GS +R++ + +R F GH + + F P D ++S S+D T++LWN
Sbjct: 85 LFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP-DNRQIVSASRDKTIKLWNT 143
Query: 87 KTDICIAIFGGVEGHRDEVLSADFDLLGTK--IMSCGMDHSLKLWDL 131
I + H D + F + I+SCG D +K+W+L
Sbjct: 144 LAQCKYTITD--QQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL 188
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
MD+ L+A + ++I+ F C R + H ++ L+F P+ +L + KDH
Sbjct: 596 MDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKS-HLFFTAGKDH 654
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
++ W+ I +EGH E+ G ++S D SL+LW+ T+
Sbjct: 655 KIKQWDADKFEHIQT---LEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTR 705
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 28 LLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIK 87
++A AG ++++ + GH + + F D LL++ SKD TL++WN++
Sbjct: 427 MIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSA-DSRLLVTASKDTTLKVWNVR 485
Query: 88 TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
T + + GH DEV D+ G ++ S G D +++LW
Sbjct: 486 TG---KLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 23/86 (26%), Positives = 50/86 (58%)
Query: 49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDEVLS 107
+R ++GH + + HP+ ++L S KD +R+W+I++ + + + G H +++ S
Sbjct: 168 IRSYHGHLGGVYSIGLHPE-LDVLFSGGKDCVVRVWDIRSRVEAMTLLG----HTNDITS 222
Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTK 133
+ D ++++ MD +++LWDL K
Sbjct: 223 IETDYNDPQVITSSMDGTIRLWDLRK 248
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 23/86 (26%), Positives = 50/86 (58%)
Query: 49 VRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTDI-CIAIFGGVEGHRDEVLS 107
+R ++GH + + HP+ ++L S KD +R+W+I++ + + + G H +++ S
Sbjct: 168 IRSYHGHLGGVYSIGLHPE-LDVLFSGGKDCVVRVWDIRSRVEAMTLLG----HTNDITS 222
Query: 108 ADFDLLGTKIMSCGMDHSLKLWDLTK 133
+ D ++++ MD +++LWDL K
Sbjct: 223 IETDYNDPQVITSSMDGTIRLWDLRK 248
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 10 EENFYTCAWSMDLESGRPLLAVAGSRAVIRIFSPAF---HACVRHFYGHGHAINELKFHP 66
E + +WS +SG LLA + I+ A + C H + ++++HP
Sbjct: 104 ENEVKSVSWS---KSGA-LLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHP 159
Query: 67 QDFNLLLSVSKDHTLRLWNIK-TDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHS 125
+ ++L S S D+T++L+ D + F + H V S FD G+++ SC D +
Sbjct: 160 NE-DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQT 218
Query: 126 LKLWDLTKP--EIKDACAESYT 145
+++W KP E AC + T
Sbjct: 219 VRIWQEYKPGNEFGVACPDGKT 240
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AG ++++ H ++H+ H A+N L FHP N L++ S D
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG-NYLVTASSDS 251
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ + + GH+ + F G S G D + +W
Sbjct: 252 TLKILDLMEG---RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 20 MDLESGRPLLAVAGSRAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDH 79
+D +A AG ++++ H ++H+ H A+N L FHP N L++ S D
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG-NYLITASSDS 251
Query: 80 TLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLW 129
TL++ ++ + + GH+ + F G S G D + +W
Sbjct: 252 TLKILDLMEG---RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 18 WSMDLESGRPLLAVAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVS 76
WS + R + ++GS +++++ C+ YGH + + H + ++S S
Sbjct: 305 WSSQM---RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR---VVSGS 358
Query: 77 KDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD 130
+D TLR+W+I+T C+ + + GH V +D G +++S D +K+WD
Sbjct: 359 RDATLRVWDIETGQCLHV---LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 407
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 59/250 (23%), Positives = 114/250 (45%)
Query: 31 VAGSR-AVIRIFSPAFHACVRHFYGHGHAINELKFHPQDFNLLLSVSKDHTLRLWNIKTD 89
V+GSR A +R++ C+ GH A+ +++ D ++S + D +++W+ +T+
Sbjct: 355 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETE 411
Query: 90 ICIAIFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWD---------------LTKP 134
C+ ++GH + V S FD G ++S +D S+++WD LT
Sbjct: 412 TCLHT---LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 466
Query: 135 -EIKDACAESYTFNPARSTRPFDTQKEHFPQ-FSTRDIHRNYVDCVRWLGDFVLSKSCEN 192
E+KD S N + + +D + Q + H++ V C+++ +FV++ S +
Sbjct: 467 MELKDNILVSG--NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 524
Query: 193 CIICWKPGRLEDKELRTNETNVTIIN-RLNFKDCEIWFIRFSMDYWQKILAVGNQSG--- 248
+ W +L+T E ++ +W IR S + + AVG+++G
Sbjct: 525 TVKLW--------DLKTGEFIRNLVTLESGGSGGVVWRIRASNT--KLVCAVGSRNGTEE 574
Query: 249 -RTYVWDLDV 257
+ V D DV
Sbjct: 575 TKLLVLDFDV 584
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 34/100 (34%), Positives = 47/100 (47%)
Query: 36 AVIRIFSPAFHACVR-HFYGHGHA-INELKFHPQDFNLLLSVSKDHTLRLWNIKTDICIA 93
A + I +P A R FYG H +N F P D LL+ S D + +W K+
Sbjct: 4 APMNIRAPTRLAVGRVRFYGQHHGEVNCSAFSP-DGRTLLTASDDGCVYVWGTKSG---R 59
Query: 94 IFGGVEGHRDEVLSADFDLLGTKIMSCGMDHSLKLWDLTK 133
+ + GHR V S F G I S DHS++LWD+ +
Sbjct: 60 LLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVAR 99
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 241 LAVGNQSGRTYVWDLDVQDP 260
LA G+ ++WDL P
Sbjct: 167 LATGSWDSTVHIWDLRASTP 186
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 37/123 (30%), Positives = 58/123 (47%)
Query: 11 ENFYTCAWSMDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ Y+ WS G L+ V+GS ++++ P + F GH I + P
Sbjct: 112 QEVYSVDWSQT--RGEQLV-VSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIP 168
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKL 128
S S D TLR+W++KT + I V H+ E+LS D+ ++ G +D SL+
Sbjct: 169 GCFASASGDQTLRIWDVKTT-GVRIV--VPAHQAEILSCDWCKYNENLLVTGAVDCSLRG 225
Query: 129 WDL 131
WDL
Sbjct: 226 WDL 228
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 11 ENFYTCAWSMDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ Y+ WS G L+ V+GS ++++ P + F GH I + P
Sbjct: 107 QEVYSVDWSQT--RGEQLV-VSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIP 163
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKL 128
S S D TLR+W++KT + I + H+ E+LS D+ ++ G +D SL+
Sbjct: 164 GCFASASGDQTLRIWDVKT-AGVRIV--IPAHQTEILSCDWCKYNENLVVTGAVDCSLRG 220
Query: 129 WDL 131
WDL
Sbjct: 221 WDL 223
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI-KTDICIAIFGGVEGHRDEVLSADFDL 112
GH +AI +KF P ++L S S D T+R WN K D + VE H + D L
Sbjct: 235 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD---PLLETVEHHTEFTCGLDLSL 291
Query: 113 LG-TKIMSCGMDHSLKLWD---LTKP 134
T++ C D ++K++D LT P
Sbjct: 292 QSPTEVADCSWDETIKIYDPVCLTVP 317
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 11 ENFYTCAWSMDLESGRPLLAVAGS-RAVIRIFSPAFHACVRHFYGHGHAINELKFHPQDF 69
+ Y+ WS G L+ V+GS ++++ P + F GH I + P
Sbjct: 107 QEVYSVDWSQT--RGEQLV-VSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIP 163
Query: 70 NLLLSVSKDHTLRLWNIKTDICIAIFGGVEGHRDEVLSADFDLLGTKIMSCG-MDHSLKL 128
S S D TLR+W++KT + I + H+ E+LS D+ ++ G +D SL+
Sbjct: 164 GCFASASGDQTLRIWDVKTT-GVRIV--IPAHQTEILSCDWCKYNENLVVTGAVDCSLRG 220
Query: 129 WDL 131
WDL
Sbjct: 221 WDL 223
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 54 GHGHAINELKFHPQDFNLLLSVSKDHTLRLWNI-KTDICIAIFGGVEGHRDEVLSADFDL 112
GH +AI +KF P ++L S S D T+R WN K D + VE H + D L
Sbjct: 235 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD---PLLETVEHHTEFTCGLDLSL 291
Query: 113 LG-TKIMSCGMDHSLKLWD---LTKP 134
T++ C D ++K++D LT P
Sbjct: 292 QSPTQVADCSWDETIKIYDPVCLTVP 317
WARNING: HSPs involving 101 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.451 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 291 291 0.00089 115 3 11 22 0.45 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 351
No. of states in DFA: 620 (66 KB)
Total size of DFA: 259 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 24.95u 0.08s 25.03t Elapsed: 00:00:14
Total cpu time: 25.01u 0.08s 25.09t Elapsed: 00:00:17
Start: Thu Aug 15 11:29:10 2013 End: Thu Aug 15 11:29:27 2013
WARNINGS ISSUED: 2