BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10349
(517 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 293/525 (55%), Gaps = 37/525 (7%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQF--TKFNWNFTTEFQPGACRG 58
G VV +RL+E P WKVLL+EAG +E IP + +L F + ++ + TE +P AC
Sbjct: 76 GSVVASRLSEVPQWKVLLIEAGGDEPVGAQIP--SMFLNFIGSDIDYRYNTEPEPMACLS 133
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSED-I 117
+RC WP G+ +GG SV+N +Y RGN D+D W GN GW Y DVLP+FKKSED +
Sbjct: 134 SMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNL 193
Query: 118 DVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQG 177
D+ E+ +EYH GG L V PY L A L++ E+G ++ D N + + GF Q
Sbjct: 194 DLDEVG-TEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQN-STGFMIAQM 251
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN-NKKRVVY 236
T + G R+S+++AFLRP R N H++ K+LI P+TK V GVE R +
Sbjct: 252 TARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKIL 311
Query: 237 AKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTV 295
KKEVVLSAGA SPH+LLLSG+GP+++L+Q N+ + +L VG+NL H + + F
Sbjct: 312 VKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFID 371
Query: 296 NQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGL-GYVRTKYNNYPPGVPDIEYIFV 354
+ +D N A G + G + + T+Y + P PD++ F
Sbjct: 372 D------ADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKLATRYADSPE-RPDLQLYF- 423
Query: 355 PASLAIEEEKGGSLLRKTMGIPDRTFK--ELFRDVKNKDAWSIWPMLMYPESRGYVRLKS 412
GG L RT + EL + N + I+P ++ P SRG++ L+S
Sbjct: 424 ----------GGYLASCA-----RTGQVGELLSN--NSRSIQIFPAVLNPRSRGFIGLRS 466
Query: 413 ADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYG 472
ADP+ P + +N+ D+ +VEGIK VI LS+T ++Y +L ++ C+ H +G
Sbjct: 467 ADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFG 526
Query: 473 SDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SD YW C VRQ T +HQ G+CKMGP D AVV+ LRVHGI+
Sbjct: 527 SDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIR 571
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 283/534 (52%), Gaps = 55/534 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQF--TKFNWNFTTEFQPGACRG 58
G VV +RL+E P WKVLL+EAG +E IP + +L F + ++ + TE + AC
Sbjct: 76 GSVVASRLSEVPQWKVLLIEAGGDEPVGAQIP--SMFLNFIGSDIDYRYNTEPERMACLS 133
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+RC WP G+ +GG SV+N +Y RGN D+D W GN GW Y+DVLP+FKKSED
Sbjct: 134 SMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVLPFFKKSEDNL 193
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ +EYH GG L V PY L A L++ E+G ++ D N + + GF Q T
Sbjct: 194 ELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQDLNGQN-STGFMIAQMT 252
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN-NKKRVVYA 237
+ G R+S+++AFLRP R N H++ V KVLI P TK V GVE R +
Sbjct: 253 ARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKNVVGVEVSDQFGSMRKILV 312
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNI-PVLADLQVGENLQEHPAF-------- 288
KKEV++S GA SP +LLLSG+GP+E L++ N+ PV VG+NL H A+
Sbjct: 313 KKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGKNLHNHVAYFTNFFIDD 372
Query: 289 ---ASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPG 345
A L + + L D + S + A W P
Sbjct: 373 ADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKMATRWADR-----------------PN 415
Query: 346 VPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFK--ELFRDVKNKDAWSIWPMLMYPE 403
+PD++ F GG L RT + EL + N A I+P ++ P+
Sbjct: 416 LPDLQLYF-----------GGYLASCA-----RTGQVGELLSN--NSRAIQIFPAVLNPK 457
Query: 404 SRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRIL 463
SRGY+ L+SADP+ P + +N+ D D+ +VEGIK I LS+T+ ++Y +L ++
Sbjct: 458 SRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQTSPLKQYGMRLDKTVV 517
Query: 464 PACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
C+ H + SD YW C VRQ T +HQ G+CKMGP D AVV+ LRVHG++
Sbjct: 518 KGCESHAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGVR 571
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 260/524 (49%), Gaps = 54/524 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLE-AGDEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ V+++E G + L +P L + ++W F +E +P
Sbjct: 15 GSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWGFASEPEPH---- 70
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
L P G+ +GG+S IN +Y RG+ DFD W E G GWG+ DVLPYFK+ ED D
Sbjct: 71 LGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFADVLPYFKRMEDND 130
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
E + G GG L+V K+ L AF+E+ + G LTD + GF ++ T
Sbjct: 131 GGE---DGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSKQEGFGPMEQT 187
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKK-ARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
I GRR+SA+ A+L+P ++R N ++K AR +V+I+ +R GVE + + +VV A
Sbjct: 188 ISGGRRWSAASAYLKPALKRKNVSLVKGFAR--RVIIE--NQRAIGVEIEAHKQIQVVKA 243
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
++EV+++A + SP +L+LSGIGP E L + I V+AD VG NLQ+H L
Sbjct: 244 RREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDH---MELYIQQE 300
Query: 297 QKVGLVSDRIFSNLAKETIKA---FTNQGWTTTLGCEGLGYVRTKYN-NYPPGVPDIEYI 352
+ + + + +K I A F G T E +VR++ +Y PDI+Y
Sbjct: 301 STKPITLNSVLNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAGVDY----PDIQYH 356
Query: 353 FVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKS 412
F+PA++ + G K+ G F+ +++K SRG V L+S
Sbjct: 357 FIPAAVRYD----GKAAAKSHG-----FQAHVGPMRSK-------------SRGSVTLRS 394
Query: 413 ADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYG 472
DP P ++ N+ P D I++ E+ +AF ++ + I P
Sbjct: 395 PDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQ---EISPGSHVQ--- 448
Query: 473 SDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SDD +R +H CGTCKMG D T+VVDP RV G+
Sbjct: 449 SDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGV 492
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 261/529 (49%), Gaps = 62/529 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHYLQFTKFNWNFTTEFQPGACRGL 59
GCV+ RL+ENP +V L+EAG + + L +P + W+ TE Q A
Sbjct: 16 GCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWDLLTEPQKHA---- 71
Query: 60 NNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDV 119
NN + P+ GR +GG S IN ++TRG+P+DFDRW G GW ++DV YF +SE V
Sbjct: 72 NNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQKYFIRSEGNAV 131
Query: 120 PELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQGT 178
+HG G L V + AF++S E+GL D+N G Q T
Sbjct: 132 ---FSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFNGAS-QEGAGIYQMT 187
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I+ RR S + +LRP + R N V+ +A VLK++ N R GV+++ N A
Sbjct: 188 IRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVF--NGTRATGVQYIANGTLNTAEAS 245
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVNQ 297
+E+V++AGA +P L++LSG+GP L + IPV+ DL VGENLQ+H F V+
Sbjct: 246 QEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDH-------FGVDI 298
Query: 298 KVGLVSDRIFSNLAKETIKAFTNQGWT-------TTLGCEGLGYVRTKYNNYPPGVPDIE 350
L +D F K + +T + EG + Y++ GVPD++
Sbjct: 299 VAELKTDESFDKYRKLHWMLWAGLEYTMFRSGPVASNVVEGGAF---WYSDPSSGVPDLQ 355
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
+ F+ + A E S+ + GI ++ ++ P+SRG VRL
Sbjct: 356 FHFLAEAGA--EAGVTSVPKGASGITLNSY------------------VLRPKSRGTVRL 395
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKY--KSKLSTRILPACKK 468
+SADP V P V NF DP DL EG+++ E+ + +K+ K+ + P +
Sbjct: 396 RSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLEKHIRKTCFFSGKQPTMQM 455
Query: 469 HKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
++ DY R+ +H TCKMG D +VVDPRL+VHG++
Sbjct: 456 YR----DY----AREHGRTSYHPTCTCKMGR--DDMSVVDPRLKVHGLE 494
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 255/528 (48%), Gaps = 62/528 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLE-AGDEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ V++LE G + +P + + ++NW + +E +P
Sbjct: 14 GSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYLSEPEPN---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DFDRW E G GW Y DVLPY+K+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYADVLPYYKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
E + G G L+V P K+ L AF+E+ + G +T DYN GF ++
Sbjct: 130 GGE---EGWRGTDGPLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNGSK-QEGFGLMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
T GRR+SA+ A+LRP ++RPN ++ + K++I+ R GVE + + VV A
Sbjct: 186 TTWRGRRWSAASAYLRPALKRPNVELV-RCFARKIVIE--NGRATGVEIERGGRTEVVRA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
+EV++SA +F SP LL+LSGIGP L++ I V AD VG+NLQ+H F
Sbjct: 243 NREVIVSASSFNSPKLLMLSGIGPAAHLQEMGIDVKADRPGVGQNLQDHMEF------YF 296
Query: 297 QKVGLVSDRIFSNL------AKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PD 348
Q+V ++S L F +G + E ++R+ PGV PD
Sbjct: 297 QQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESCAFLRSA-----PGVKQPD 351
Query: 349 IEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYV 408
I+Y F+P +++ + G K+ G L + SRG V
Sbjct: 352 IQYHFLPVAISYD----GKAAAKSHGFQVHVGYNLSK------------------SRGDV 389
Query: 409 RLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKK 468
L+S+DP P ++ N+ P D + +++ E+ AF Y+ I P
Sbjct: 390 TLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYR---GPEIQPG--- 443
Query: 469 HKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
K +D+ +R+ +H CGTCKMG D AVVDP RV G+
Sbjct: 444 EKVRTDEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGV 491
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 258/537 (48%), Gaps = 70/537 (13%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFT--------------KFNWN 46
GCV+ NRLTE+P+ +VLLLEAG + D+ + LQ+ K+NW
Sbjct: 57 GCVLANRLTEDPNHRVLLLEAGPK-----DLLMGSKRLQWKIHMPAALVANLCDDKYNWY 111
Query: 47 FTTEFQPGACRGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKD 106
+ TE QPG L+ WP GR GG+S +N +Y RG+ D++RW G GW Y
Sbjct: 112 YHTEAQPG----LDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAH 167
Query: 107 VLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSP 166
LPYF+K++ EL + Y G G L+V L AFL++A + G T+ +
Sbjct: 168 CLPYFRKAQK---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNG 224
Query: 167 DGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEF 226
GF + TI G+R+S + A+LRP + RPN + V +VL + R GVE+
Sbjct: 225 FQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--GTRAVGVEY 282
Query: 227 MKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEH 285
+K+ + Y +EV+LS GA SP LL+LSG+G + L++ IPV+ L VG+NLQ+H
Sbjct: 283 IKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDH 342
Query: 286 PAFASLAFTVNQKVGLVSDRIFSN---LAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNY 342
+ Q + L S + + E + FT G T L E G++R++
Sbjct: 343 LEI-YIQHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHL--ETGGFIRSR---- 395
Query: 343 PPGV--PDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLM 400
PGV PDI++ F+P+ + + R ++A+ + M
Sbjct: 396 -PGVPHPDIQFHFLPSQVI----------------------DHGRKPTQQEAYQVHVGTM 432
Query: 401 YPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLST 460
S G+++L+S +P +P + N+ D+ + +K+ E+ AF ++ K
Sbjct: 433 RATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGK--- 489
Query: 461 RILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+ P SD VR +H TCKMG D TAVVD + RV G++
Sbjct: 490 ELQPGSHVQ---SDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVE 543
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 256/532 (48%), Gaps = 60/532 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE--------NALTDIPET-AHYLQFTKFNWNFTTEF 51
GCV+ RLTE+P +VLLLEAG ++ + +P L ++NW + TE
Sbjct: 52 GCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLCDDRYNWCYHTEV 111
Query: 52 QPGACRGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYF 111
Q RGL+ WP GR GG+S +N +Y RG+ D++RW G GW Y LPYF
Sbjct: 112 Q----RGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYF 167
Query: 112 KKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVG 171
+K++ EL S Y G G L V L AFLE+ + G LT+ + G
Sbjct: 168 RKAQG---HELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEG 224
Query: 172 FSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNK 231
F + TI G+R+SA+ A+L P + R N + V +VL + R GVE++KN +
Sbjct: 225 FGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFE--GTRAVGVEYVKNGQ 282
Query: 232 KRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
YA KEV+LS GA SP LL+LSGIG + L++ IPV+ L VG+NLQ+H
Sbjct: 283 SHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEI-Y 341
Query: 291 LAFTVNQKVGLVSDRIFSN---LAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV- 346
+ + + L S + + E + FT +G T L E G++R++ PGV
Sbjct: 342 IQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHL--ETGGFIRSQ-----PGVP 394
Query: 347 -PDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESR 405
PDI++ F+P+ + + R ++A+ + M S
Sbjct: 395 HPDIQFHFLPSQVI----------------------DHGRVPTQQEAYQVHVGPMRGTSV 432
Query: 406 GYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPA 465
G+++L+SA+P +P +Q N+ D+ +K+ E+ A ++ K + P
Sbjct: 433 GWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGK---ELQPG 489
Query: 466 CKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SD VR +H TCKMG D TAVVDP+ RV G++
Sbjct: 490 SHIQ---SDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVE 538
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 254/528 (48%), Gaps = 62/528 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLE-AGDEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ V++LE G + +P + + ++NW + +E +P
Sbjct: 14 GSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYLSEPEPN---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPY+K+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYADVLPYYKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
E + G G L+V P K+ L AF+E+ E G +T DYN GF ++
Sbjct: 130 GGE---EGWRGTDGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNGSK-QEGFGLMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
T GRR+SA+ A+LRP ++RPN ++ + K++I+ R GVE + + VV A
Sbjct: 186 TTWRGRRWSAASAYLRPALKRPNVELI-RCFARKIVIE--NGRATGVEIERGGRIEVVKA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
+EV++SA +F SP LL+LSGIGP L++ I V D VG+NLQ+H F
Sbjct: 243 NREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQDHMEF------YF 296
Query: 297 QKVGLVSDRIFSNL------AKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PD 348
Q+V ++S L F +G + E ++R+ PGV PD
Sbjct: 297 QQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESCAFLRSA-----PGVKQPD 351
Query: 349 IEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYV 408
I+Y F+P +++ + G K+ G L + SRG V
Sbjct: 352 IQYHFLPVAISYD----GKAAAKSHGFQVHVGYNLSK------------------SRGNV 389
Query: 409 RLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKK 468
L+S+DP P ++ N+ P D + +++ E+ AF Y+ I P
Sbjct: 390 SLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYR---GPEIQPG--- 443
Query: 469 HKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
K +D+ +R+ +H CGTCKMG D AVVDP RV G+
Sbjct: 444 EKVQTDEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGV 491
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 250/522 (47%), Gaps = 50/522 (9%)
Query: 1 GCVVTNRLTENPDWKVLLLE-AGDEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + +RL+E+ V++LE G + +P + + ++NW + +E +P
Sbjct: 14 GSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWGYLSEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DFDRW + G GW Y DVLPYFK+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
E + G G L+V P K+ L AF+E+ + G +TD + GF ++ T
Sbjct: 130 GGE---DGWRGTDGPLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYNGSKQEGFGLMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
GRR+SA+ A+L+P ++RPN ++ + K++I+ R GVE + + VV A
Sbjct: 187 TWRGRRWSAASAYLKPALKRPNVQLI-RCFARKIVIE--NGRATGVEIERGGRIEVVKAN 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVNQ 297
+EV++SA +F SP LL+LSGIGP L+ I V D VG+NLQ+H F + +
Sbjct: 244 REVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNLQDHMEFYFQQIST-K 302
Query: 298 KVGLVS-DRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIEYIFV 354
V L S F F G + E ++R+ PGV PDI+Y F+
Sbjct: 303 PVSLYSWLPWFWQGVAGAQWLFFKSGLGISNQFEACAFLRSA-----PGVKQPDIQYHFL 357
Query: 355 PASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSAD 414
P ++ + G T G L + SRG V L+++D
Sbjct: 358 PVAIRYD----GKAAANTHGFQVHVGYNLSK------------------SRGSVTLRASD 395
Query: 415 PMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSD 474
P P ++ N+ P D + +++ E+ AF +Y+ I P + +D
Sbjct: 396 PKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDQYR---GPEIQPG---ERVQTD 449
Query: 475 DYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
+ +R+ +H CGTCKMG D AVVDP RV G+
Sbjct: 450 EEIDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPETRVIGV 491
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 255/529 (48%), Gaps = 62/529 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLE-AGDEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + +RL+E+ V++LE G + +P + + ++NW + +E +P
Sbjct: 14 GSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWGYLSEPEPQ---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPYFK+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
E + G G L+V ++ L AF+E+ + G T DYN GF ++
Sbjct: 130 GGE---EGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEATEDYNGGK-QEGFGLMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
T GRR+SA+ A+L+P ++RPN ++ + KV+I+ R GVE + K +V A
Sbjct: 186 TTWMGRRWSAATAYLKPALKRPNVELI-RCFARKVVIE--NGRATGVEIERGGKIEIVKA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
EV++SA +F SP LL+LSGIGP + L++ I V D VG NLQ+H F
Sbjct: 243 NSEVIVSASSFNSPKLLMLSGIGPGQHLQEMGIEVKIDRPGVGANLQDHMEF------YF 296
Query: 297 QKVGLVSDRIFSNL---AKETIKA---FTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PD 348
Q+ L ++S L + + A F G T+ E ++R+ PGV PD
Sbjct: 297 QQTSLKPVSLYSWLPWYMQGIVGAQWMFFKSGLGTSNQFEACAFLRSA-----PGVKQPD 351
Query: 349 IEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYV 408
I+Y F+P +++ + G K+ G L + SRG V
Sbjct: 352 IQYHFLPVAISYD----GKAAAKSHGFQAHVGYNLSK------------------SRGAV 389
Query: 409 RLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKK 468
L+S+DP P ++ N+ P D + +++ E+ AF Y+ I P
Sbjct: 390 TLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDYR---GPEIQPGPDV 446
Query: 469 HKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+DD +R+ +H CGTCKMG D AVVDP RV G++
Sbjct: 447 Q---TDDQIDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPDTRVIGVE 492
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 262/533 (49%), Gaps = 62/533 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENAL--------TDIPET-AHYLQFTKFNWNFTTEF 51
GCV+ +RLTE+P+ +VLLLEAG ++ + +P L K+NW + TE
Sbjct: 54 GCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLCDDKYNWYYHTEP 113
Query: 52 QPGACRGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYF 111
QPG +++ WP GR GG+S +N +Y RG+ D++RW G GW Y LPYF
Sbjct: 114 QPG----MDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHCLPYF 169
Query: 112 KKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVG 171
+K++ EL + Y G G L+V L AFL++A + G T+ + G
Sbjct: 170 RKAQR---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEG 226
Query: 172 FSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNK 231
F + T+ G+R+S + A+L P++ RPN + V +VL + R GVE++K+ +
Sbjct: 227 FGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE--GTRAVGVEYIKDGQ 284
Query: 232 KRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEH-PAFA 289
+ Y +EV+LS GA SP LL+LSG+G + L + +IPV+ L VG+NLQ+H +
Sbjct: 285 RHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYV 344
Query: 290 SLAFTVNQKVGLVSDRIFSN---LAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV 346
A T Q + L S + + E + ++T G T L E G++R++ PGV
Sbjct: 345 QQACT--QPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHL--ETGGFIRSR-----PGV 395
Query: 347 --PDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPES 404
PDI++ F+P+ + + R ++A+ + M S
Sbjct: 396 PHPDIQFHFLPSQVI----------------------DHGRKPTQQEAYQVHVGTMRATS 433
Query: 405 RGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILP 464
G+++L+SA+P +P + N+ D+ + +++ E+ A ++ K + P
Sbjct: 434 VGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGK---ELQP 490
Query: 465 ACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SD VR +H TCKMG D TAVVD + +V G++
Sbjct: 491 GSHVQ---SDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVE 540
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 248/525 (47%), Gaps = 56/525 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ VL++EAG + +P + + ++NW + +E +P
Sbjct: 14 GSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPN---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPYFK+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
E + G G L+V + + L AF+E+ + G TD + GF ++ T
Sbjct: 130 GGE---EGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNGSKQEGFGLMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++R N M K++I+ R GVE + K VV A
Sbjct: 187 IFSGRRWSAANAYLKPALKRKNVG-MVYGLARKIVIEDG--RATGVEIERGGKVEVVKAT 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVNQ 297
+EV++SA +F SP LL+LSGIGP + L I V AD VG NLQ+H F Q
Sbjct: 244 REVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDHMEF------YFQ 297
Query: 298 KVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLG----YVRTKYNNYPPGV--PDIEY 351
+V ++S L + W + G GLG + + PG+ PDI+Y
Sbjct: 298 QVSTKPVSLYSWL-PWFWQGVAGAQWLLSKG--GLGASNQFEACAFLRSAPGLKQPDIQY 354
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P +++ + G K+ G L + SRG V L+
Sbjct: 355 HFLPVAISYD----GKAAAKSHGFQVHVGYNLSK------------------SRGSVTLR 392
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKY 471
S DP P ++ N+ P D + +++ E+ AF Y+ I P
Sbjct: 393 SPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYR---GPEIQPG---EGV 446
Query: 472 GSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD+ +R+ +H CGTCKMG D AVVDP+ RV G+
Sbjct: 447 QSDEQIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGV 491
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 250/526 (47%), Gaps = 56/526 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ + V+++EAG + +P + + ++NW + +E +P
Sbjct: 14 GSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPN---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
L+N R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPYFK+ E
Sbjct: 70 LDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
E + G G L+V P + L AF+++ + G LTD + GF ++ T
Sbjct: 130 GGE---EGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++R N + KV+I+ R GVE + + V A
Sbjct: 187 IHNGRRWSAANAYLKPALKRGNV-TLVNGFARKVIIE--NGRAVGVEIERRGRVETVKAN 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVNQ 297
+EV++SA +F SP LL+LSGIGP L+ I V AD VG NLQ+H F Q
Sbjct: 244 REVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHMEF------YFQ 297
Query: 298 KVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLG----YVRTKYNNYPPGV--PDIEY 351
+V ++S L + W + G GLG + + PG+ PDI+Y
Sbjct: 298 QVSTKPVSLYSWL-PWFWQGVAGAQWLLSKG--GLGASNQFEACAFLRSAPGLKQPDIQY 354
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P +++ + G K+ G L + SRG V L+
Sbjct: 355 HFLPVAISYD----GKAAAKSHGFQAHVGYNLSK------------------SRGNVTLR 392
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKY 471
SADP P ++ N+ P D + +++ E+ AF ++ I P
Sbjct: 393 SADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFR---GPEIQPG---ENI 446
Query: 472 GSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ +R+ +H CGTC+MG D AVVDP RV G++
Sbjct: 447 ETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVE 492
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 250/527 (47%), Gaps = 58/527 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ VL++EAG + +P + + ++NW + +E +P
Sbjct: 14 GSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPN---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPYFK+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
E + G G L+V + + L AF+E+ + G T DYN GF ++
Sbjct: 130 GGE---EGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSK-QEGFGLMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
TI GRR+SA+ A+L+P ++R N ++ V+ D R GVE + K VV A
Sbjct: 186 TIFSGRRWSAANAYLKPALKRKNVEIIYGFAQRIVIED---GRATGVEIERGGKIEVVKA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
+EV++SA +F SP LL+LSGIGP E L++ I V AD VG NLQ+H F
Sbjct: 243 NREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDHMEF------YF 296
Query: 297 QKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLG----YVRTKYNNYPPGV--PDIE 350
Q+V ++S L + W + G GLG + + PG+ PDI+
Sbjct: 297 QQVSTKPVSLYSWL-PWFWQGVAGAQWLLSKG--GLGASNQFEACAFLRSAPGLKQPDIQ 353
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
Y F+P +++ + G K+ G L + SRG V L
Sbjct: 354 YHFLPVAISYD----GKAAAKSHGFQVHVGYNLSK------------------SRGSVTL 391
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470
+S DP P ++ N+ D + +++ EL AF Y+ I P
Sbjct: 392 RSPDPKADPVLRFNYMSHAEDWEKFRHCVRLTRELFGQAAFDDYR---GAEIQPG---ES 445
Query: 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SD+ +R+ +H CGTCKMG D AVVDP+ RV G++
Sbjct: 446 VQSDEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVE 492
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 252/526 (47%), Gaps = 58/526 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ VL++EAG + +P + + ++NW + +E +P
Sbjct: 14 GSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPN---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPYFK+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
E + G G L+V + + L AF+E+ + G T DYN GF ++
Sbjct: 130 GGE---EGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNGSK-QEGFGLMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
TI GRR+SA+ A+L+P ++R N ++ +++I+ R GVE + + VV A
Sbjct: 186 TIFAGRRWSAANAYLKPALKRDNVGIV-YGLARRIVIE--NGRATGVEIERGGRTEVVKA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
+EV++SA +F SP LL+LSGIGP + L++ I V AD VG NLQ+H F
Sbjct: 243 NREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQDHMEF------YF 296
Query: 297 QKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLG----YVRTKYNNYPPGV--PDIE 350
Q+V ++S L + W + G GLG + + PG+ PDI+
Sbjct: 297 QQVSTKPVSLYSWL-PWFWQGVAGAQWLLSKG--GLGASNQFEACAFLRSAPGLKQPDIQ 353
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
Y F+P +++ + G K+ G L + SRG V L
Sbjct: 354 YHFLPVAISYD----GKAAAKSHGFQVHVGYNLSK------------------SRGSVTL 391
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470
+S DP P ++ N+ P D + +++ E+ AF Y+ I P
Sbjct: 392 RSPDPKADPVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAYR---GPEIQPG---EG 445
Query: 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD+ +R+ +H CGTCKMG D AVVDP+ RV G+
Sbjct: 446 VQSDEQIDSFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGV 491
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 250/526 (47%), Gaps = 58/526 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E V+++EAG + +P + + ++NW + +E P A
Sbjct: 14 GSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSE--PEA--N 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LNN R P G+ +GG+S IN +Y RG+ DF+RW E G GW Y DVLPYFK+ E
Sbjct: 70 LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSH 129
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
E + G G L+V + + L AF+E+ + G T DYN GF ++
Sbjct: 130 GGE---EGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSK-QEGFGLMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
TI GRR+SA+ A+L+P ++R N ++ V+ D R GVE +N + VV A
Sbjct: 186 TIFGGRRWSAANAYLKPALKRDNVKIVYGLAQRIVIED---GRATGVEIERNGRIEVVKA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
+EV++SA +F SP LL+LSGIGP + L+ I V AD VG NLQ+H F
Sbjct: 243 NREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDHMEF------YF 296
Query: 297 QKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLG----YVRTKYNNYPPGV--PDIE 350
Q+V ++S L + W + G GLG + + PG+ PDI+
Sbjct: 297 QQVSTKPVSLYSWL-PWFWQGVAGAQWLLSRG--GLGASNQFEACAFLRSAPGLKQPDIQ 353
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
Y F+P +++ + G K+ G L + SRG V L
Sbjct: 354 YHFLPVAISYD----GKAAAKSHGFQVHVGYNLSK------------------SRGSVSL 391
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470
+SADP P ++ N+ D + +++ E+ +AF Y+ I P
Sbjct: 392 RSADPKADPVLRFNYMSHAEDWEKFRHCVRLTREIFGQSAFHDYR---GPEIQPG---EG 445
Query: 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD+ +R+ +H CGTC+MG D AVVDP+ RV GI
Sbjct: 446 VQSDEEIDAFLREHLESAYHPCGTCRMGAKDDPMAVVDPQTRVIGI 491
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 253/523 (48%), Gaps = 53/523 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGL 59
G VV +RL+ +P V+ LEAG ++N +P L ++ +W++ TE QP L
Sbjct: 16 GAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDYLTEPQPE----L 71
Query: 60 NNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDV 119
+ WP G+ +GG+S +N ++ RG +D+D W W Y DVL YF++ E++
Sbjct: 72 DGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVLGYFRRIENVTA 131
Query: 120 P-ELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ GV G L++ + A+L +A E G NSP GF T
Sbjct: 132 AWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAARPNSPRPE-GFCETVVT 190
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
+ G RFS + A+L+P + R N V+ A +V+ID + R GVE+ + + R+VYA+
Sbjct: 191 QRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVIDGD--RAVGVEYQSDGQTRIVYAR 248
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNI-PVLADLQVGENLQEHPAFASLAFTVNQ 297
+EVVL AGA SP LL+LSGIG R+ L + +I V +VG NL +H L F V +
Sbjct: 249 REVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLLDH-LVTVLGFDVEK 307
Query: 298 KVGLVSDRIFSNLAKETIKAFT--NQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVP 355
D +F+ + ++ +G T+ E G+VR++ +PD+E IF P
Sbjct: 308 ------DSLFAAEKPGQLISYLLRRRGMLTSNVGEAYGFVRSRPELK---LPDLELIFAP 358
Query: 356 ASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADP 415
A E +P +F P+L+ P+SRG + L+SADP
Sbjct: 359 APFYDEAL-----------VPPAGHGVVF-----------GPILVAPQSRGQITLRSADP 396
Query: 416 MVYPAVQSNFFQD--PLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGS 473
P ++ + D +D ++ G+++ +++ + ++ R + + +
Sbjct: 397 HAKPVIEPRYLSDLGGVDRAAMMAGLRICARIAQARPLRDLLGSIA-RPRNSTELDEATL 455
Query: 474 DDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
+ C + ++H GTC+MG D +VVDP+LRV G+
Sbjct: 456 ELALATC----SHTLYHPMGTCRMG--SDEASVVDPQLRVRGV 492
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 253/523 (48%), Gaps = 53/523 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGL 59
G VV +RL+ +P V+ LEAG ++N +P L ++ +W++ TE QP L
Sbjct: 16 GAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDYLTEPQPE----L 71
Query: 60 NNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDV 119
+ WP G+ +GG+S +N ++ RG +D+D W W Y DVL YF++ E++
Sbjct: 72 DGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVLGYFRRIENVTA 131
Query: 120 P-ELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ GV G L++ + A+L +A E G NSP GF T
Sbjct: 132 AWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAARPNSPRPE-GFCETVVT 190
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
+ G RFS + A+L+P + R N V+ A +V+ID + R GVE+ + + R+VYA+
Sbjct: 191 QRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVIDGD--RAVGVEYQSDGQTRIVYAR 248
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNI-PVLADLQVGENLQEHPAFASLAFTVNQ 297
+EVVL AGA SP LL+LSGIG R+ L + +I V +VG NL +H L F V +
Sbjct: 249 REVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLLDH-LVTVLGFDVEK 307
Query: 298 KVGLVSDRIFSNLAKETIKAFT--NQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVP 355
D +F+ + ++ +G T+ E G+VR++ +PD+E IF P
Sbjct: 308 ------DSLFAAEKPGQLISYLLRRRGMLTSNVGEAYGFVRSRPELK---LPDLELIFAP 358
Query: 356 ASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADP 415
A E +P +F P+L+ P+SRG + L+SADP
Sbjct: 359 APFYDEAL-----------VPPAGHGVVF-----------GPILVAPQSRGQITLRSADP 396
Query: 416 MVYPAVQSNFFQD--PLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGS 473
P ++ + D +D ++ G+++ +++ + ++ R + + +
Sbjct: 397 HAKPVIEPRYLSDLGGVDRAAMMAGLRICARIAQARPLRDLLGSIA-RPRNSTELDEATL 455
Query: 474 DDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
+ C + ++H GTC+MG D +VVDP+LRV G+
Sbjct: 456 ELALATC----SHTLYHPMGTCRMG--SDEASVVDPQLRVRGV 492
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 256/525 (48%), Gaps = 54/525 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+EN + V+++E G + L +P + + ++W F++E +P
Sbjct: 14 GSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSSEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+ P G+ +GG+S IN +Y RG+ DFD W ++G GW Y DVLPYFK+ E+
Sbjct: 70 IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMEN-- 127
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ + + G G L V + L AF+E+ + G +TD + + GF ++ T
Sbjct: 128 -SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++RPN ++ K K++++ KR GVE + A+
Sbjct: 187 IHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGVEIEAGRTFSTIRAR 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVNQ 297
+EV+++A + SP LL+LSGIGP L++ I ++AD VG+NLQ+H + Q
Sbjct: 244 REVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE-VYIQQECTQ 302
Query: 298 KVGLVSD-RIFSN--LAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIEYI 352
+ L S+ +FS + E + T G T E +VR+K GV PDI+Y
Sbjct: 303 PITLYSELNLFSKARIGVEWLLFKTGDGATNHF--ESAAFVRSK-----AGVEYPDIQYH 355
Query: 353 FVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKS 412
F+P ++ + G ++ G F+ +++K SRG V L+S
Sbjct: 356 FLPVAIRYD----GKAAAQSHG-----FQAHVGPMRSK-------------SRGSVTLRS 393
Query: 413 ADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYG 472
A+P P ++ N+ D +++ E+ AF Y+ I P
Sbjct: 394 ANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR---GAEIQPGAHVQ--- 447
Query: 473 SDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+DD +R+ H CGTCKMG D AVVDP RV G++
Sbjct: 448 TDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVE 492
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 263/525 (50%), Gaps = 53/525 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHYLQFTK-FNWNFTTEFQPGACRG 58
GCV+ NRL+ +P +V LLEAG + N L +P L +K NW F T Q +
Sbjct: 13 GCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQTAPQ----QN 68
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LN WP G+ +GG+S IN +Y RG+ +D+ W +A WG+ L FK+ E
Sbjct: 69 LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRALELFKRLECNQ 128
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSP--DGNVGFSRI 175
+SE+HGV G L V Y + L AF+++ E +N D+N DG VGF ++
Sbjct: 129 --RFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGEYQDG-VGFYQV 185
Query: 176 QGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVV 235
T + G+R+S+++AFL ++ RPN ++ A K+L + ++ GV ++K N V
Sbjct: 186 --TQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFE--DRKAVGVSYIKKNMHHQV 241
Query: 236 YAKK--EVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASL- 291
EV+LS GA +PHLL+LSG+G +L++ + ++ DL +VG+NLQ+H +
Sbjct: 242 KTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQDHLDITLMC 301
Query: 292 AFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
A + +G+ I ++ F +G+ T+ E G+V++ + P++++
Sbjct: 302 AANSREPIGVALSFIPRGVSGLFSYVFKREGFLTSNVAESGGFVKSSPDR---DRPNLQF 358
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P L K+ R + +++ + P+SRG + LK
Sbjct: 359 HFLPTYL----------------------KDHGRKIAGGYGYTLHICDLLPKSRGRIGLK 396
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKY 471
SA+P+ P + N+ D D+ ++ GIK+ + + + K+ ++P
Sbjct: 397 SANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKH---FKHEVVPG---QAV 450
Query: 472 GSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
+DD +R+ ++H GTC+MG D +VVDP L++ G+
Sbjct: 451 KTDDEIIEDIRRRAETIYHPVGTCRMGK--DPASVVDPCLKIRGL 493
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 260/526 (49%), Gaps = 53/526 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE-NALTDIPETAHYLQFTK-FNWNFTTEFQPGACRG 58
GCV+ NRL+ +P +V LLEAG + N L +P L +K NW F T Q +
Sbjct: 13 GCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQTAPQ----QH 68
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
LN WP G+ +GG+S IN +Y RG+ D+ W +AG WG+K FKK E
Sbjct: 69 LNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRAFALFKKLEHNQ 128
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYN-SPDGNVGFSRIQ 176
+S YHG G L V + L +F+++ E ++ D+N + VGF ++
Sbjct: 129 --RFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQEGVGFYQV- 185
Query: 177 GTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVY 236
T + G+R+S+++AFL +++RPN ++ +A KVL + ++ GV +++ N + V
Sbjct: 186 -TQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFE--DRKAVGVSYIQKNMHQQVK 242
Query: 237 AKK--EVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAF 293
EV+LS GA +P LL+LSG+G +L++ I ++ DL +VG+NLQ+H +L
Sbjct: 243 TTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQDHLDI-TLMC 301
Query: 294 TVNQK--VGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
N + +G+ I L F +G+ T+ E G+V++ P++++
Sbjct: 302 AANSRTPIGVAFSFIPRGLVGLFSYIFKRKGFLTSNVAESGGFVKSSPER---DRPNLQF 358
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P L K+ R + +++ + P+SRG + LK
Sbjct: 359 HFLPTYL----------------------KDHGRKIAVGYGYTLHICDLLPKSRGRIGLK 396
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKY 471
SA+PM P + N+ DP D+ ++ GIK+ + + K+ I+P
Sbjct: 397 SANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKH---FKREIVPGP---AV 450
Query: 472 GSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SDD +R ++H GTC+MG D +VVDP L+V G++
Sbjct: 451 TSDDEIVADIRSRAETIYHPVGTCRMGK--DPASVVDPCLQVRGLR 494
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 252/524 (48%), Gaps = 52/524 (9%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ + V+++E G + L +P + + ++W F+TE +P
Sbjct: 14 GSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSTEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+ P G+ +GG+S IN +Y RG+ D+D W E+G GW Y DVLPYFK+ E+
Sbjct: 70 IGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYADVLPYFKRMEN-- 127
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFSRIQG 177
+ + G G L + + L AF+E+ E G +T DYN + GF ++
Sbjct: 128 -SSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNG-EKQEGFGPMEQ 185
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYA 237
TI GRR+SA+ A+L+P ++RPN ++ K K++++ KR GVE + A
Sbjct: 186 TIHNGRRWSAANAYLKPALKRPNVKLV-KGLARKIVLE--GKRAVGVEIEAGRSFSTIRA 242
Query: 238 KKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVN 296
++EV+++A + SP LL+LSGIGP QL++ I V+AD VG+NLQ+H +
Sbjct: 243 RREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDHLE-VYIQQECT 301
Query: 297 QKVGLVSD-RIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIEYIF 353
Q + L S +FS F G T E ++R+K GV PDI+Y F
Sbjct: 302 QPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRSK-----AGVEYPDIQYHF 356
Query: 354 VPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSA 413
+P ++ + G ++ G F+ +++K SRG V L+SA
Sbjct: 357 LPVAIRYD----GKAAAQSHG-----FQAHVGPMRSK-------------SRGSVTLRSA 394
Query: 414 DPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGS 473
+P P ++ N+ D +++ E+ AF Y+ I P S
Sbjct: 395 NPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYR---GAEIQPGAHVQ---S 448
Query: 474 DDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
DD +++ H CGTCKMG D AVVD RV G++
Sbjct: 449 DDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVE 492
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 255/527 (48%), Gaps = 58/527 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ + V+++E G + L +P + + ++W F++E +P
Sbjct: 14 GSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSSEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+ P G+ +GG+S IN +Y RG+ DFD W ++G GW Y DVLPYFK+ E+
Sbjct: 70 IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMEN-- 127
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ + + G G L V + L AF+E+ + G +TD + + GF ++ T
Sbjct: 128 -SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++RPN ++ K K++++ KR GVE + A+
Sbjct: 187 IHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGVEIEAGRTFSTIRAR 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAF-----ASLA 292
+EV+++A + SP LL+LSGIGP L++ I ++AD VG+NLQ+H +
Sbjct: 244 REVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQP 303
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIE 350
T+ K+ L S + + E + T G T E +VR+K GV PDI+
Sbjct: 304 ITLYSKLNLFSK---ARIGVEWLLFKTGDGATNHF--ESAAFVRSK-----AGVEYPDIQ 353
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
Y F+P ++ + G ++ G F+ +++K SRG V L
Sbjct: 354 YHFLPVAIRYD----GKAAAQSHG-----FQAHVGPMRSK-------------SRGSVTL 391
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470
+SA+P P ++ N+ D +++ E+ AF Y+ I P
Sbjct: 392 RSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR---GAEIQPGAHVQ- 447
Query: 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+DD +R+ H CGTCKMG D AVVDP RV G++
Sbjct: 448 --TDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVE 492
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 255/527 (48%), Gaps = 58/527 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ + V+++E G + L +P + + ++W F++E +P
Sbjct: 14 GSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSSEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+ P G+ +GG+S IN +Y RG+ DFD W ++G GW Y DVLPYFK+ E+
Sbjct: 70 IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMEN-- 127
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ + + G G L V + L AF+E+ + G +TD + + GF ++ T
Sbjct: 128 -SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++RPN ++ K K++++ KR GVE + A+
Sbjct: 187 IHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGVEIEAGRTFSTIRAR 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAF-----ASLA 292
+EV+++A + SP LL+LSGIGP L++ I ++AD VG+NLQ+H +
Sbjct: 244 REVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQP 303
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIE 350
T+ K+ L S + + E + T G T E +VR+K GV PDI+
Sbjct: 304 ITLYSKLNLFSK---ARIGVEWLLFKTGDGATNHF--ESAAFVRSK-----AGVEYPDIQ 353
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
Y F+P ++ + G ++ G F+ +++K SRG V L
Sbjct: 354 YHFLPVAIRYD----GKAAAQSHG-----FQAHVGPMRSK-------------SRGSVTL 391
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470
+SA+P P ++ N+ D +++ E+ AF Y+ I P
Sbjct: 392 RSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR---GAEIQPGAHVQ- 447
Query: 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+DD +R+ H CGTCKMG D AVVDP RV G++
Sbjct: 448 --TDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVE 492
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 255/527 (48%), Gaps = 58/527 (11%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ + V+++E G + L +P + + ++W F++E +P
Sbjct: 14 GSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSSEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+ P G+ +GG+S IN +Y RG+ DFD W ++G GW Y DVLPYFK+ E+
Sbjct: 70 IRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMEN-- 127
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ + + G G L V + L AF+E+ + G +TD + + GF ++ T
Sbjct: 128 -SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++RPN ++ K K++++ KR GVE + A+
Sbjct: 187 IHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGVEIEAGRTFSTIRAR 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAF-----ASLA 292
+EV+++A + SP LL+LSGIGP L++ I ++AD VG+NLQ+H +
Sbjct: 244 REVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQP 303
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIE 350
T+ K+ L S + + E + T G T E +VR+K GV PDI+
Sbjct: 304 ITLYSKLNLFSK---ARIGVEWLLFKTGDGATNHF--ESAAFVRSK-----AGVEYPDIQ 353
Query: 351 YIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRL 410
Y F+P ++ + G ++ G F+ +++K SRG V L
Sbjct: 354 YHFLPVAIRYD----GKAAAQSHG-----FQAHVGPMRSK-------------SRGSVTL 391
Query: 411 KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470
+SA+P P ++ N+ D +++ E+ AF Y+ I P
Sbjct: 392 RSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR---GAEIQPGAHVQ- 447
Query: 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+DD +R+ H CGTCKMG D AVVDP RV G++
Sbjct: 448 --TDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVE 492
>sp|A9M9H8|BETA_BRUC2 Choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=betA PE=3 SV=1
Length = 549
Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 255/525 (48%), Gaps = 54/525 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG-DEENALTDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
G + RL+E+ + V+++E G + L +P + + ++W F++E +P
Sbjct: 14 GSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSSEPEPH---- 69
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
+ P G+ +GG+S IN +Y RG+ DFD W ++G GW Y DVLPYFK+ E+
Sbjct: 70 IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMEN-- 127
Query: 119 VPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGT 178
+ + + G G L V + L AF+E+ + G + D + + GF ++ T
Sbjct: 128 -SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYNGEKQEGFGPMEQT 186
Query: 179 IQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAK 238
I GRR+SA+ A+L+P ++RPN ++ K K++++ KR GVE + A+
Sbjct: 187 IHNGRRWSAANAYLKPALKRPNVKLV-KGFARKIVLE--GKRAVGVEIEAGRTFSTIRAR 243
Query: 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTVNQ 297
+EV+++A + SP LL+LSGIGP L++ I ++AD VG+NLQ+H + Q
Sbjct: 244 REVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLE-VYIQQECTQ 302
Query: 298 KVGLVSD-RIFSN--LAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--PDIEYI 352
+ L S+ +FS + E + T G T E +VR+K GV PDI+Y
Sbjct: 303 PITLYSELNLFSKARIGVEWLLFKTGDGATNHF--ESAAFVRSK-----AGVEYPDIQYH 355
Query: 353 FVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKS 412
F+P ++ + G ++ G F+ +++K SRG V L+S
Sbjct: 356 FLPVAIRYD----GKAAAQSHG-----FQAHVGPMRSK-------------SRGSVTLRS 393
Query: 413 ADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYG 472
A+P P ++ N+ D +++ E+ AF Y+ I P
Sbjct: 394 ANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR---GAEIQPGAHVQ--- 447
Query: 473 SDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+DD +R+ H CGTCKMG D AVVDP RV G++
Sbjct: 448 TDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVE 492
>sp|Q6LGH5|BETA_PHOPR Choline dehydrogenase OS=Photobacterium profundum GN=betA PE=3 SV=1
Length = 568
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 249/531 (46%), Gaps = 65/531 (12%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENAL-TDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
GCV+ +RL+ + + +LLLEAG + ++ +P Y + K+ W F T QP A G
Sbjct: 16 GCVLADRLSASGEHYILLLEAGGSDRSIFIQMPTALSYPMNSEKYAWQFET--QPEA--G 71
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDID 118
L++ P GR +GG+S IN +Y RG+ D+D W+E G GW Y++ LPYF+++E
Sbjct: 72 LDSRSLHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWSYQECLPYFRRAESWI 131
Query: 119 VPELKRSEYHGVGGYLN---VDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRI 175
E G G N ++ +P L AF+++ + G TD + GF +
Sbjct: 132 HGEDTYRGGDGPVGTCNGNDMELNP----LYQAFIDAGQQAGYPKTDDYNGYQQEGFGPM 187
Query: 176 QGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVV 235
T+ G R S S A+LR ++R N V K KVLI K+ GVE K + V
Sbjct: 188 HMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLI--KNKQAIGVEIEVGGKVQSV 245
Query: 236 YAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAF-----A 289
YA EV+LSAG+ SP LL LSGIGP+ LEQ I V DL VGENLQ+H
Sbjct: 246 YANTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAGIAVKHDLPGVGENLQDHLEVYFQYAC 305
Query: 290 SLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV--P 347
T+N K+GL+S + T G T E ++R++ G+ P
Sbjct: 306 HQPITLNSKLGLISKGLIG-----TRWILQKDGLGATNHFESCAFIRSR-----AGLKWP 355
Query: 348 DIEYIFVPASLAIEEEKG--GSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESR 405
+I+Y F+PA++ + + G + +G P++ P+SR
Sbjct: 356 NIQYHFLPAAMRYDGQAAFDGHGFQVHVG-PNK-----------------------PQSR 391
Query: 406 GYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPA 465
G + + SADP P ++ N+ D + I++ E+ A Y+ + I P
Sbjct: 392 GRIWITSADPHQKPNIEFNYISTEQDKQDWRDCIRLTREILAQPAMDDYRGE---EIQPG 448
Query: 466 CKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
+ D W VRQ +H TCKMG D D V++ +V GI
Sbjct: 449 ADITSDEAMDAW---VRQNVESAYHPSCTCKMGSDNDPMTVLNKDCQVRGI 496
>sp|A7MFA8|BETA_CROS8 Choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=betA PE=3 SV=1
Length = 559
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 253/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+ D VLLLEAG + + T +P Y LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDSDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNWAYETEPEPY-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEA-GNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W + G W Y D LPY++KSE
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAQQPGLERWTYLDCLPYYRKSE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDY-SPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
D+ ++YHG G +++ P + L A +E+ + G TD + GF
Sbjct: 130 TRDI---GANDYHGGDGPVSITTCKPGNNPLFAAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNK 231
+ + GRR S ++ +L +RPN ++ A ++L + KR GV ++ +N
Sbjct: 187 MDRFVTPKGRRSSTARGYLDTAKQRPNLKIITHATTDRILFE--NKRAVGVAYLHGASNT 244
Query: 232 KRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
+ V+A++EV+L AGA SP +L SG+G E L+QF+IPV+ DL VGENLQ+H
Sbjct: 245 PQEVHARREVLLCAGAIASPQILQRSGVGNAELLKQFDIPVVHDLPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + EG G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALKWWNQPKIGAEWLFNGTGIGASNHFEGGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS + G M SRG+VR
Sbjct: 361 QYHFLPVAI----NYNGSNAVEAHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ ++ A K++ + I P
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITRQIINQPALDKFRGR---EISPGIDCQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR +H CGTCKMG D AVVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAYHPCGTCKMG--SDEMAVVDDEGRVHGLE 498
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ DL VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEFDIPLVHDLPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D AVVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLE 498
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--CKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ DL VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--CKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ DL VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|Q1RFM3|BETA_ECOUT Choline dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC)
GN=betA PE=3 SV=2
Length = 562
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 249/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A + D KR GVE+++ +
Sbjct: 187 MDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAI----NYNGSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D AVVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMAVVDAEGRVHGLE 498
>sp|B7MCD0|BETA_ECO45 Choline dehydrogenase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=betA PE=3 SV=1
Length = 562
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 249/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A + D KR GVE+++ +
Sbjct: 187 MDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAI----NYNGSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D AVVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMAVVDAEGRVHGLE 498
>sp|Q2T6D0|BETA_BURTA Choline dehydrogenase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=betA PE=3 SV=1
Length = 565
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 249/525 (47%), Gaps = 52/525 (9%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+PD VLLLEAG + + T +P Y LQ ++NW + T+ +P
Sbjct: 17 GNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYNWAYETDPEPH-- 74
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRW-LEAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D+D W G W Y D LPYF+K+E
Sbjct: 75 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLEDWTYLDCLPYFRKAE 132
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 133 TRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGP 189
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKR 233
+ T+ GRR S ++ +L RPN ++ A ++L + KR GV F+ + +
Sbjct: 190 MDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILF--SGKRATGVTFLHGSARV 247
Query: 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLA 292
+A++EV++ +GA SP LL SG+GP E L + +IPV+ DL VG NLQ+H +
Sbjct: 248 TAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVGRNLQDHLEM-YIQ 306
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTN-QGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
F + V L + N K + N G + E G++RT+ ++ P+I+Y
Sbjct: 307 FECKEPVSLYPALKWWNQPKIGLDWMINGTGLGASNHFEAGGFIRTRDDDL---WPNIQY 363
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P ++ GS + G M SRG V+LK
Sbjct: 364 HFLPVAI----NYNGSNAIEMHGFQAHVGS------------------MRSPSRGRVKLK 401
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKY 471
S DP +P++ N+ + LD + I+ E+ A +++ + + P
Sbjct: 402 SRDPNAHPSILFNYMAEALDWREFRDAIRATREIMHQPALDRFRGR---ELNPGA---DL 455
Query: 472 GSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD+ VR H +CKMG D AVVD RVHGI
Sbjct: 456 KSDNELDAFVRARAETAFHPSCSCKMGYDD--MAVVDNEGRVHGI 498
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 245/528 (46%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P Y LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNWAYETEPEPY-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEHWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDY-SPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
D+ ++YHG G ++V P + L +A +E+ + G TD + GF
Sbjct: 130 TRDI---GPNDYHGGDGPVSVTTPKPGNNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ KR GVE+++
Sbjct: 187 MDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIF--AGKRAVGVEWLEGESTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L QF+IPV+ DL VGENLQ+H
Sbjct: 245 PSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHDLPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEAGGFIRSRAEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
LKS DP +PA+ N+ D + I++ E+ A KY+ + I P +
Sbjct: 399 LKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKYRGR---EISPGIECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
D + VR H CGTCKMG D AVVD RVHG++
Sbjct: 456 SDAELDEF---VRNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLE 498
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|Q39A44|BETA_BURS3 Choline dehydrogenase OS=Burkholderia sp. (strain 383) GN=betA PE=3
SV=1
Length = 566
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 256/528 (48%), Gaps = 56/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+PD VLLLEAG + + T +P Y LQ ++NW + T+ +P
Sbjct: 17 GNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYNWAYETDPEPH-- 74
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRW-LEAGNVGWGYKDVLPYFKKSE 115
++N R G+ +GG+S+IN Y RGN D+D W G W Y D LPYFKK+E
Sbjct: 75 --MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE 132
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV ++YHG G ++V S P + L +A +++ + G TD + GF
Sbjct: 133 TRDVGP---NDYHGGNGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGP 189
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKR 233
+ T+ GRR S ++ +L RPN ++ A ++L D KR GV +++ +++
Sbjct: 190 MDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGVTYLRGSERA 247
Query: 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLA 292
+A++EV++ +GA SP LL SG+GP L++ +IPV+ DL VG+NLQ+H +
Sbjct: 248 TAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEM-YIQ 306
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTN-QGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
+ + V L + N K ++ N G + E G++RT+ ++ P+I+Y
Sbjct: 307 YECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDL---WPNIQY 363
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P ++ GS + G M SRG V+L+
Sbjct: 364 HFLPVAI----NYNGSNAIEMHGFQAHVGS------------------MRSPSRGRVKLR 401
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPA--CKKH 469
S DP +P++ N+ + LD + I+ E+ + A +Y+ + + P CK
Sbjct: 402 SRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR---ELNPGADCK-- 456
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SD VR H +CKMG D AVVD RVHG++
Sbjct: 457 ---SDKELDAFVRARAETAFHPSCSCKMGYDD--MAVVDEEGRVHGLE 499
>sp|B6I074|BETA_ECOSE Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA
PE=3 SV=1
Length = 556
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|A7ZWV4|BETA_ECOHS Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA
PE=3 SV=1
Length = 556
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|B7M2V5|BETA_ECO8A Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA
PE=3 SV=1
Length = 556
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|B7L439|BETA_ECO55 Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC)
GN=betA PE=3 SV=1
Length = 556
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|A7ZI50|BETA_ECO24 Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=betA PE=3 SV=1
Length = 556
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGTECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|Q0TKW1|BETA_ECOL5 Choline dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 249/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S S+ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPHGRRASTSRGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N + + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +P + N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPGILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D AVVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLE 498
>sp|B1K707|BETA_BURCC Choline dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3)
GN=betA PE=3 SV=1
Length = 566
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 255/527 (48%), Gaps = 56/527 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+PD VLLLEAG + + T +P Y LQ ++NW + T+ +P
Sbjct: 17 GNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYNWAYETDPEPH-- 74
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRW-LEAGNVGWGYKDVLPYFKKSE 115
++N R G+ +GG+S+IN Y RGN D+D W G W Y D LPYFKK+E
Sbjct: 75 --MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE 132
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV ++YHG G ++V S P + L +A +++ + G TD + GF
Sbjct: 133 TRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGP 189
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKR 233
+ T+ GRR S ++ +L RPN ++ A ++L D KR GV +++ +++
Sbjct: 190 MDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGVTYLRGSERA 247
Query: 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLA 292
+A++EV++ +GA SP LL SG+GP L++ +IPV+ DL VG+NLQ+H +
Sbjct: 248 TAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEM-YIQ 306
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTN-QGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
+ + V L + N K ++ N G + E G++RT+ ++ P+I+Y
Sbjct: 307 YECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDD---PWPNIQY 363
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P ++ GS + G M SRG V+L+
Sbjct: 364 HFLPVAI----NYNGSNAIEMHGFQAHVGS------------------MRSPSRGRVKLR 401
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPA--CKKH 469
S DP +P++ N+ + LD + I+ E+ + A +Y+ + + P CK
Sbjct: 402 SRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR---ELNPGADCK-- 456
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD VR H +CKMG D AVVD RVHG+
Sbjct: 457 ---SDKELDAFVRARAETAFHPSCSCKMGYDD--MAVVDEEGRVHGL 498
>sp|B7UJG4|BETA_ECO27 Choline dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=betA PE=3 SV=1
Length = 556
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 249/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDVGE---NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N + + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAI----NYNGSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I+ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRTTREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D AVVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLE 498
>sp|A0B2F7|BETA_BURCH Choline dehydrogenase OS=Burkholderia cenocepacia (strain HI2424)
GN=betA PE=3 SV=1
Length = 566
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 255/527 (48%), Gaps = 56/527 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+PD VLLLEAG + + T +P Y LQ ++NW + T+ +P
Sbjct: 17 GNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYNWAYETDPEPH-- 74
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRW-LEAGNVGWGYKDVLPYFKKSE 115
++N R G+ +GG+S+IN Y RGN D+D W G W Y D LPYFKK+E
Sbjct: 75 --MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE 132
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV ++YHG G ++V S P + L +A +++ + G TD + GF
Sbjct: 133 TRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGP 189
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKR 233
+ T+ GRR S ++ +L RPN ++ A ++L D KR GV +++ +++
Sbjct: 190 MDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGVTYLRGSERA 247
Query: 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLA 292
+A++EV++ +GA SP LL SG+GP L++ +IPV+ DL VG+NLQ+H +
Sbjct: 248 TAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEM-YIQ 306
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTN-QGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
+ + V L + N K ++ N G + E G++RT+ ++ P+I+Y
Sbjct: 307 YECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDD---PWPNIQY 363
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P ++ GS + G M SRG V+L+
Sbjct: 364 HFLPVAI----NYNGSNAIEMHGFQAHVGS------------------MRSPSRGRVKLR 401
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPA--CKKH 469
S DP +P++ N+ + LD + I+ E+ + A +Y+ + + P CK
Sbjct: 402 SRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR---ELNPGADCK-- 456
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD VR H +CKMG D AVVD RVHG+
Sbjct: 457 ---SDKELDAFVRARAETAFHPSCSCKMGYDD--MAVVDEEGRVHGL 498
>sp|Q1BQE2|BETA_BURCA Choline dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054)
GN=betA PE=3 SV=1
Length = 566
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 255/527 (48%), Gaps = 56/527 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+PD VLLLEAG + + T +P Y LQ ++NW + T+ +P
Sbjct: 17 GNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYNWAYETDPEPH-- 74
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRW-LEAGNVGWGYKDVLPYFKKSE 115
++N R G+ +GG+S+IN Y RGN D+D W G W Y D LPYFKK+E
Sbjct: 75 --MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYLDCLPYFKKAE 132
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
DV ++YHG G ++V S P + L +A +++ + G TD + GF
Sbjct: 133 TRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGYQQEGFGP 189
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKR 233
+ T+ GRR S ++ +L RPN ++ A ++L D KR GV +++ +++
Sbjct: 190 MDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGVTYLRGSERA 247
Query: 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLA 292
+A++EV++ +GA SP LL SG+GP L++ +IPV+ DL VG+NLQ+H +
Sbjct: 248 TAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEM-YIQ 306
Query: 293 FTVNQKVGLVSDRIFSNLAKETIKAFTN-QGWTTTLGCEGLGYVRTKYNNYPPGVPDIEY 351
+ + V L + N K ++ N G + E G++RT+ ++ P+I+Y
Sbjct: 307 YECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDD---PWPNIQY 363
Query: 352 IFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLK 411
F+P ++ GS + G M SRG V+L+
Sbjct: 364 HFLPVAI----NYNGSNAIEMHGFQAHVGS------------------MRSPSRGRVKLR 401
Query: 412 SADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPA--CKKH 469
S DP +P++ N+ + LD + I+ E+ + A +Y+ + + P CK
Sbjct: 402 SRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR---ELNPGADCK-- 456
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
SD VR H +CKMG D AVVD RVHG+
Sbjct: 457 ---SDKELDAFVRARAETAFHPSCSCKMGYDD--MAVVDEEGRVHGL 498
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 251/532 (47%), Gaps = 67/532 (12%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENAL-TDIPETAHY-LQFTKFNWNFTTEFQPGACRG 58
GCV+ +RL+E+ D VLLLEAG + ++ +P Y + K+ W F T+ +
Sbjct: 16 GCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKYAWQFETDAEAD---- 71
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSED-I 117
L+ R P G+ +GG+S IN +Y RG+ DFD W E G GW Y+ LPYF+++E+ I
Sbjct: 72 LDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQACLPYFRRAENWI 131
Query: 118 DVPELKRSEYHGVGGYLNVDYSPYKS--KLMDAFLESAPEVGL-NLTDYNSPDGNVGFSR 174
D EY G G L+ + L AF+++ E G +DYN GF
Sbjct: 132 D----GEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNGYQ-QEGFGP 186
Query: 175 IQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRV 234
+ T++ G R S S A+L +R NF ++K V ++L++ KR GVEF + R
Sbjct: 187 MHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLE--EKRAVGVEFELAGELRT 244
Query: 235 VYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNI-PVLADLQVGENLQEH-----PAF 288
+AK EV+ SAG+ S LL LSGIGP+ LE+ + PV VG+NLQ+H
Sbjct: 245 CFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVGQNLQDHLEVYFQYH 304
Query: 289 ASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGV-- 346
T+N K+ S + T T +G T E ++R++ G+
Sbjct: 305 CQKPITLNGKLDWFSKGLIG-----TEWILTRKGLGATNHFESCAFIRSR-----AGLKW 354
Query: 347 PDIEYIFVPASLAIEEEKG--GSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPES 404
P+I+Y F+PA++ + + G + +G P++ PES
Sbjct: 355 PNIQYHFLPAAMRYDGQAAFDGHGFQVHVG-PNK-----------------------PES 390
Query: 405 RGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILP 464
RG V + SA+P+ P +Q N+ D + I++ E+ A +++ + I P
Sbjct: 391 RGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGE---EIQP 447
Query: 465 ACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
D W V++ +H +CKMG D D AV+D RV GI
Sbjct: 448 GINVATDAEIDQW---VKENVESAYHPSCSCKMGADDDPMAVLDEECRVRGI 496
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
D+ E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 250/528 (47%), Gaps = 54/528 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEE---NALTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
G V+ RLTE+P+ VLLLEAG + + T +P + LQ ++NW + TE +P
Sbjct: 14 GNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPF-- 71
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWL-EAGNVGWGYKDVLPYFKKSE 115
+NN R G+ +GG+S+IN Y RGN D D W E G W Y D LPY++K+E
Sbjct: 72 --MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAE 129
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSR 174
D+ E ++YHG G ++V S P + L +A +E+ + G TD + GF
Sbjct: 130 TRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGP 186
Query: 175 IQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKK- 232
+ T+ GRR S ++ +L RPN + A ++ D KR GVE+++ +
Sbjct: 187 MDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKRAVGVEWLEGDSTI 244
Query: 233 -RVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFAS 290
A KEV+L AGA SP +L SG+G E L +F+IP++ +L VGENLQ+H
Sbjct: 245 PTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEM-Y 303
Query: 291 LAFTVNQKVGLVSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDI 349
L + + V L + N K + F G + E G++R++ P+I
Sbjct: 304 LQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEF---AWPNI 360
Query: 350 EYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVR 409
+Y F+P ++ GS K G M SRG+VR
Sbjct: 361 QYHFLPVAINYN----GSNAVKEHGFQCHVGS------------------MRSPSRGHVR 398
Query: 410 LKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKH 469
+KS DP +PA+ N+ D + I++ E+ A +Y+ + I P +
Sbjct: 399 IKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGR---EISPGVECQ 455
Query: 470 KYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
+D+ VR H CGTCKMG D +VVD RVHG++
Sbjct: 456 ---TDEQLDEFVRNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLE 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,673,883
Number of Sequences: 539616
Number of extensions: 8893803
Number of successful extensions: 18615
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 17612
Number of HSP's gapped (non-prelim): 264
length of query: 517
length of database: 191,569,459
effective HSP length: 122
effective length of query: 395
effective length of database: 125,736,307
effective search space: 49665841265
effective search space used: 49665841265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)