Query psy10349
Match_columns 517
No_of_seqs 256 out of 1495
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 15:40:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 2.3E-94 7.9E-99 772.0 38.5 482 1-517 14-529 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 1.9E-89 6.4E-94 735.0 29.2 480 1-517 31-542 (583)
3 3q9t_A Choline dehydrogenase a 100.0 7.7E-87 2.6E-91 715.4 35.5 475 1-517 18-536 (577)
4 1gpe_A Protein (glucose oxidas 100.0 1.2E-81 4.1E-86 679.9 25.7 487 1-517 36-546 (587)
5 3t37_A Probable dehydrogenase; 100.0 9.5E-78 3.2E-82 645.0 41.0 453 1-517 29-487 (526)
6 2jbv_A Choline oxidase; alcoho 100.0 1.9E-77 6.5E-82 642.7 41.3 459 1-517 25-493 (546)
7 1ju2_A HydroxynitrIle lyase; f 100.0 5.7E-65 2E-69 544.7 21.7 423 1-517 38-480 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 1.3E-60 4.6E-65 513.6 22.0 444 1-517 19-506 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 1.3E-56 4.5E-61 477.3 19.4 404 1-517 17-463 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 7.5E-55 2.6E-59 463.8 18.5 402 1-517 23-468 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.1E-35 3.7E-40 322.7 19.5 373 68-517 157-576 (623)
12 4at0_A 3-ketosteroid-delta4-5a 98.8 8.8E-08 3E-12 101.4 15.3 65 191-256 207-272 (510)
13 1qo8_A Flavocytochrome C3 fuma 98.2 8.1E-06 2.8E-10 87.4 11.6 60 191-252 255-315 (566)
14 1y0p_A Fumarate reductase flav 98.0 3E-05 1E-09 83.1 12.4 62 191-254 260-323 (571)
15 1d4d_A Flavocytochrome C fumar 97.8 7.2E-05 2.5E-09 80.1 11.6 64 191-256 260-325 (572)
16 2h88_A Succinate dehydrogenase 97.5 0.00095 3.3E-08 71.9 14.1 52 196-250 165-218 (621)
17 2bs2_A Quinol-fumarate reducta 97.4 0.00067 2.3E-08 73.6 11.6 51 197-250 169-221 (660)
18 3dme_A Conserved exported prot 97.4 9.5E-05 3.2E-09 73.9 4.3 60 196-260 160-220 (369)
19 2wdq_A Succinate dehydrogenase 97.3 0.0011 3.9E-08 71.0 11.2 52 197-250 154-207 (588)
20 1chu_A Protein (L-aspartate ox 97.2 0.00096 3.3E-08 70.8 9.4 52 198-250 151-209 (540)
21 3nyc_A D-arginine dehydrogenas 97.1 0.0016 5.6E-08 65.1 9.8 54 197-259 165-218 (381)
22 1y56_B Sarcosine oxidase; dehy 97.1 0.00075 2.6E-08 67.9 7.2 56 196-259 159-214 (382)
23 2gag_B Heterotetrameric sarcos 96.8 0.0017 6E-08 65.6 7.3 56 196-259 184-239 (405)
24 1pj5_A N,N-dimethylglycine oxi 96.8 0.0021 7.3E-08 71.8 8.1 55 197-259 162-216 (830)
25 2oln_A NIKD protein; flavoprot 96.7 0.0078 2.7E-07 60.8 10.8 53 197-258 164-216 (397)
26 3ps9_A TRNA 5-methylaminomethy 96.6 0.0033 1.1E-07 68.6 8.0 53 197-257 428-480 (676)
27 1jnr_A Adenylylsulfate reducta 96.6 0.0059 2E-07 66.1 9.9 50 200-250 166-219 (643)
28 2gf3_A MSOX, monomeric sarcosi 96.6 0.0081 2.8E-07 60.3 10.2 52 196-256 160-211 (389)
29 3gyx_A Adenylylsulfate reducta 96.5 0.0033 1.1E-07 68.2 7.3 49 200-249 182-233 (662)
30 3pvc_A TRNA 5-methylaminomethy 96.1 0.0097 3.3E-07 65.0 7.9 54 197-257 423-476 (689)
31 2uzz_A N-methyl-L-tryptophan o 95.6 0.06 2E-06 53.5 11.1 50 196-254 159-208 (372)
32 2e5v_A L-aspartate oxidase; ar 94.5 0.069 2.3E-06 55.4 7.8 47 197-249 130-176 (472)
33 2rgh_A Alpha-glycerophosphate 94.0 0.088 3E-06 56.0 7.6 59 197-259 199-259 (571)
34 3da1_A Glycerol-3-phosphate de 93.9 0.12 4.1E-06 54.8 8.4 60 197-260 181-242 (561)
35 1kf6_A Fumarate reductase flav 93.6 0.11 3.6E-06 55.7 7.3 58 191-251 140-199 (602)
36 4dgk_A Phytoene dehydrogenase; 90.8 0.12 4.1E-06 53.7 3.3 55 196-256 231-285 (501)
37 3dje_A Fructosyl amine: oxygen 90.3 0.12 4E-06 52.7 2.7 52 196-254 171-225 (438)
38 1rp0_A ARA6, thiazole biosynth 90.3 0.46 1.6E-05 45.3 6.7 51 195-248 129-190 (284)
39 3ka7_A Oxidoreductase; structu 89.8 0.18 6.1E-06 51.0 3.6 52 197-255 207-258 (425)
40 3cgv_A Geranylgeranyl reductas 89.1 0.4 1.4E-05 47.7 5.5 57 190-249 106-162 (397)
41 2i0z_A NAD(FAD)-utilizing dehy 88.6 0.46 1.6E-05 48.6 5.7 51 196-252 144-194 (447)
42 3e1t_A Halogenase; flavoprotei 88.5 0.51 1.8E-05 49.2 6.0 57 190-249 115-172 (512)
43 3axb_A Putative oxidoreductase 88.4 0.28 9.7E-06 50.0 3.8 57 196-258 191-262 (448)
44 3atr_A Conserved archaeal prot 88.1 0.57 2E-05 47.9 6.0 57 191-250 105-163 (453)
45 2qcu_A Aerobic glycerol-3-phos 86.7 0.69 2.4E-05 48.1 5.7 54 197-255 160-215 (501)
46 3f8d_A Thioredoxin reductase ( 86.2 2.1 7.1E-05 40.8 8.5 65 191-259 195-261 (323)
47 3cty_A Thioredoxin reductase; 85.6 0.82 2.8E-05 44.0 5.2 59 198-259 202-262 (319)
48 2zxi_A TRNA uridine 5-carboxym 83.9 0.41 1.4E-05 51.1 2.3 48 198-252 136-183 (637)
49 3itj_A Thioredoxin reductase 1 83.2 1.2 4E-05 43.0 5.1 56 197-255 220-277 (338)
50 3ces_A MNMG, tRNA uridine 5-ca 82.7 0.62 2.1E-05 49.9 3.1 46 199-251 138-183 (651)
51 3i3l_A Alkylhalidase CMLS; fla 82.3 1.2 4E-05 47.4 5.1 55 190-247 132-186 (591)
52 1trb_A Thioredoxin reductase; 81.0 1.5 5E-05 42.1 4.9 57 196-255 194-253 (320)
53 3nlc_A Uncharacterized protein 80.9 0.63 2.2E-05 49.0 2.3 48 197-250 231-278 (549)
54 1fl2_A Alkyl hydroperoxide red 80.6 2.1 7E-05 40.8 5.8 56 197-255 191-248 (310)
55 3jsk_A Cypbp37 protein; octame 80.1 2.8 9.5E-05 41.2 6.5 59 191-250 166-252 (344)
56 3lxd_A FAD-dependent pyridine 79.7 1.6 5.5E-05 43.9 4.8 64 191-260 199-262 (415)
57 3ab1_A Ferredoxin--NADP reduct 79.2 3.5 0.00012 40.3 7.1 60 197-259 213-273 (360)
58 2q0l_A TRXR, thioredoxin reduc 78.9 2.4 8E-05 40.4 5.6 58 197-257 190-249 (311)
59 1ryi_A Glycine oxidase; flavop 78.9 1 3.5E-05 44.5 3.0 55 196-259 174-228 (382)
60 3fg2_P Putative rubredoxin red 78.6 1.6 5.5E-05 43.7 4.4 64 191-260 189-252 (404)
61 1vdc_A NTR, NADPH dependent th 78.2 3.7 0.00013 39.4 6.8 59 196-255 205-265 (333)
62 1mo9_A ORF3; nucleotide bindin 77.9 3.2 0.00011 43.2 6.6 66 191-259 260-327 (523)
63 3nrn_A Uncharacterized protein 76.8 1.3 4.5E-05 44.5 3.2 50 197-255 200-249 (421)
64 2gmh_A Electron transfer flavo 76.7 1.8 6.2E-05 45.9 4.3 59 190-250 148-218 (584)
65 2gjc_A Thiazole biosynthetic e 76.5 5 0.00017 39.0 7.1 56 192-247 153-237 (326)
66 3r9u_A Thioredoxin reductase; 76.3 2.1 7.1E-05 40.7 4.3 58 195-255 192-250 (315)
67 3oz2_A Digeranylgeranylglycero 76.1 3 0.0001 40.9 5.5 58 190-251 106-163 (397)
68 3kkj_A Amine oxidase, flavin-c 75.2 0.66 2.3E-05 42.5 0.4 23 1-24 14-36 (336)
69 2q7v_A Thioredoxin reductase; 75.1 3.6 0.00012 39.5 5.7 56 196-255 198-255 (325)
70 2cul_A Glucose-inhibited divis 71.8 4.5 0.00015 36.9 5.2 49 198-253 81-129 (232)
71 3v76_A Flavoprotein; structura 71.6 3.2 0.00011 41.9 4.5 50 196-253 142-191 (417)
72 1hyu_A AHPF, alkyl hydroperoxi 70.3 5 0.00017 41.7 5.8 54 198-254 403-458 (521)
73 3c4n_A Uncharacterized protein 69.7 1.6 5.5E-05 43.8 1.7 55 196-259 182-246 (405)
74 3nix_A Flavoprotein/dehydrogen 69.6 3.9 0.00014 40.8 4.7 54 191-248 111-165 (421)
75 4dgk_A Phytoene dehydrogenase; 69.4 0.97 3.3E-05 46.6 0.0 24 1-25 13-36 (501)
76 2gqf_A Hypothetical protein HI 68.7 3.6 0.00012 41.3 4.1 76 191-274 114-191 (401)
77 3p1w_A Rabgdi protein; GDI RAB 66.9 3 0.0001 42.9 3.1 48 196-248 266-313 (475)
78 2zbw_A Thioredoxin reductase; 65.7 6.8 0.00023 37.5 5.3 64 192-259 197-262 (335)
79 3s5w_A L-ornithine 5-monooxyge 65.3 5.2 0.00018 40.6 4.6 60 190-252 131-193 (463)
80 4a9w_A Monooxygenase; baeyer-v 64.8 1.6 5.5E-05 42.3 0.6 61 191-258 81-141 (357)
81 3lzw_A Ferredoxin--NADP reduct 64.8 7.8 0.00027 36.8 5.6 59 197-259 200-260 (332)
82 3oz2_A Digeranylgeranylglycero 63.7 1.6 5.6E-05 42.9 0.4 24 1-25 16-39 (397)
83 2bcg_G Secretory pathway GDP d 63.1 1.7 5.8E-05 44.4 0.4 47 197-248 253-299 (453)
84 3iwa_A FAD-dependent pyridine 63.1 6.5 0.00022 40.1 4.8 62 191-259 207-268 (472)
85 3p1w_A Rabgdi protein; GDI RAB 62.5 1.8 6.1E-05 44.6 0.4 24 1-25 32-55 (475)
86 1k0i_A P-hydroxybenzoate hydro 61.2 7.6 0.00026 38.3 4.8 50 198-250 115-164 (394)
87 2xve_A Flavin-containing monoo 61.1 4.4 0.00015 41.4 3.1 67 191-259 106-176 (464)
88 2ywl_A Thioredoxin reductase r 59.6 7.2 0.00025 33.6 3.8 52 197-259 67-118 (180)
89 3ka7_A Oxidoreductase; structu 59.0 2.4 8.2E-05 42.5 0.6 24 1-25 12-35 (425)
90 3cp8_A TRNA uridine 5-carboxym 58.6 11 0.00036 40.3 5.5 47 197-250 129-175 (641)
91 3nrn_A Uncharacterized protein 57.8 2.6 8.9E-05 42.3 0.6 24 1-25 12-35 (421)
92 1q1r_A Putidaredoxin reductase 57.6 5.7 0.0002 40.1 3.2 63 194-260 199-261 (431)
93 2x3n_A Probable FAD-dependent 57.3 12 0.00041 36.9 5.5 48 197-250 119-167 (399)
94 2bcg_G Secretory pathway GDP d 56.8 11 0.00037 38.3 5.2 24 1-25 23-46 (453)
95 2bry_A NEDD9 interacting prote 55.8 2.2 7.5E-05 44.2 -0.3 61 191-252 171-233 (497)
96 4gde_A UDP-galactopyranose mut 55.7 2.2 7.6E-05 43.9 -0.3 25 1-25 22-46 (513)
97 3k7m_X 6-hydroxy-L-nicotine ox 55.3 2.7 9.3E-05 42.2 0.3 44 196-247 214-257 (431)
98 2eq6_A Pyruvate dehydrogenase 55.1 11 0.00036 38.5 4.7 64 192-259 216-283 (464)
99 1i8t_A UDP-galactopyranose mut 54.7 3.1 0.00011 41.1 0.6 24 1-25 13-36 (367)
100 3ihg_A RDME; flavoenzyme, anth 53.6 17 0.00057 37.7 6.1 56 191-248 125-182 (535)
101 1d5t_A Guanine nucleotide diss 52.8 9.1 0.00031 38.6 3.8 44 198-248 246-289 (433)
102 2qa1_A PGAE, polyketide oxygen 52.6 18 0.00062 37.2 6.1 58 189-250 109-166 (500)
103 3ef6_A Toluene 1,2-dioxygenase 52.1 5.9 0.0002 39.6 2.2 63 191-260 190-252 (410)
104 3dje_A Fructosyl amine: oxygen 51.5 3.1 0.0001 42.0 -0.1 23 1-24 18-41 (438)
105 2dkh_A 3-hydroxybenzoate hydro 50.0 17 0.00057 38.8 5.5 61 197-260 153-220 (639)
106 2qae_A Lipoamide, dihydrolipoy 50.0 14 0.00049 37.4 4.8 65 191-259 220-288 (468)
107 1vg0_A RAB proteins geranylger 49.6 14 0.00047 39.5 4.6 47 196-246 388-434 (650)
108 1ryi_A Glycine oxidase; flavop 49.5 3.7 0.00013 40.3 0.2 22 1-23 29-50 (382)
109 1c0p_A D-amino acid oxidase; a 49.5 3.7 0.00013 40.1 0.2 22 1-23 18-39 (363)
110 2jae_A L-amino acid oxidase; o 49.0 29 0.00098 35.2 6.9 43 201-247 252-294 (489)
111 1yvv_A Amine oxidase, flavin-c 48.9 3.8 0.00013 39.3 0.2 48 200-254 119-167 (336)
112 2a87_A TRXR, TR, thioredoxin r 48.7 9.7 0.00033 36.6 3.1 54 197-254 202-257 (335)
113 1m6i_A Programmed cell death p 48.4 13 0.00044 38.2 4.1 59 194-259 234-292 (493)
114 2gv8_A Monooxygenase; FMO, FAD 48.1 8.9 0.0003 38.8 2.8 55 200-258 129-186 (447)
115 2qa2_A CABE, polyketide oxygen 47.8 20 0.00069 36.8 5.5 55 190-249 111-166 (499)
116 1v0j_A UDP-galactopyranose mut 47.7 3.5 0.00012 41.2 -0.3 24 1-25 19-43 (399)
117 4b63_A L-ornithine N5 monooxyg 47.5 15 0.00051 37.9 4.4 59 188-247 147-212 (501)
118 4dna_A Probable glutathione re 47.3 9.3 0.00032 38.8 2.8 54 194-253 219-272 (463)
119 1zmd_A Dihydrolipoyl dehydroge 46.8 16 0.00054 37.2 4.5 65 192-259 226-294 (474)
120 3fpz_A Thiazole biosynthetic e 46.6 5 0.00017 38.7 0.6 24 1-24 77-101 (326)
121 2a8x_A Dihydrolipoyl dehydroge 45.9 14 0.00047 37.6 3.8 62 194-259 220-283 (464)
122 2v3a_A Rubredoxin reductase; a 45.7 23 0.00078 34.8 5.4 63 191-260 192-254 (384)
123 3s5w_A L-ornithine 5-monooxyge 45.5 23 0.00078 35.7 5.5 49 198-250 328-378 (463)
124 1ebd_A E3BD, dihydrolipoamide 45.3 16 0.00056 36.9 4.3 56 194-253 219-274 (455)
125 1yvv_A Amine oxidase, flavin-c 44.0 18 0.0006 34.5 4.1 23 1-24 14-36 (336)
126 1v59_A Dihydrolipoamide dehydr 43.8 18 0.00061 36.8 4.3 60 191-252 229-290 (478)
127 3nks_A Protoporphyrinogen oxid 43.6 6.6 0.00022 39.9 1.0 51 197-254 245-295 (477)
128 3cgv_A Geranylgeranyl reductas 43.4 5.3 0.00018 39.3 0.2 23 1-24 16-38 (397)
129 3ic9_A Dihydrolipoamide dehydr 42.5 23 0.0008 36.2 5.0 49 201-253 229-278 (492)
130 1d5t_A Guanine nucleotide diss 42.5 5.9 0.0002 40.0 0.4 24 1-25 18-41 (433)
131 3nix_A Flavoprotein/dehydrogen 42.1 6.3 0.00022 39.2 0.5 23 1-24 17-39 (421)
132 3hdq_A UDP-galactopyranose mut 41.9 6.1 0.00021 39.6 0.4 24 1-25 41-64 (397)
133 2ivd_A PPO, PPOX, protoporphyr 41.8 6.8 0.00023 39.8 0.7 51 200-254 249-299 (478)
134 3nlc_A Uncharacterized protein 41.6 5.1 0.00017 42.0 -0.3 23 1-24 119-141 (549)
135 3da1_A Glycerol-3-phosphate de 41.6 6.1 0.00021 41.5 0.3 22 1-23 30-51 (561)
136 2weu_A Tryptophan 5-halogenase 41.4 18 0.00062 37.1 4.0 51 191-247 178-228 (511)
137 3rp8_A Flavoprotein monooxygen 41.2 6.6 0.00022 39.0 0.5 45 201-253 140-185 (407)
138 1rsg_A FMS1 protein; FAD bindi 41.2 6.2 0.00021 40.8 0.3 24 1-25 20-44 (516)
139 3dgh_A TRXR-1, thioredoxin red 41.1 20 0.0007 36.5 4.3 58 194-254 235-294 (483)
140 1gte_A Dihydropyrimidine dehyd 41.1 54 0.0019 37.0 8.1 59 198-259 382-454 (1025)
141 1rp0_A ARA6, thiazole biosynth 40.3 7.1 0.00024 36.8 0.6 24 1-24 51-74 (284)
142 3cgb_A Pyridine nucleotide-dis 40.0 19 0.00065 36.7 3.8 58 194-259 235-292 (480)
143 3dgz_A Thioredoxin reductase 2 39.8 27 0.00093 35.6 5.0 57 194-253 233-291 (488)
144 3urh_A Dihydrolipoyl dehydroge 39.8 29 0.00098 35.4 5.2 62 194-259 247-312 (491)
145 3gwf_A Cyclohexanone monooxyge 39.6 8.6 0.00029 40.2 1.1 63 191-258 92-156 (540)
146 1dxl_A Dihydrolipoamide dehydr 39.4 13 0.00045 37.7 2.5 58 192-253 224-283 (470)
147 2ivd_A PPO, PPOX, protoporphyr 39.3 28 0.00094 35.2 4.9 24 1-25 28-51 (478)
148 3nks_A Protoporphyrinogen oxid 39.3 12 0.00042 37.8 2.2 24 1-25 14-39 (477)
149 2jae_A L-amino acid oxidase; o 39.0 7.7 0.00026 39.6 0.6 24 1-25 23-46 (489)
150 3atr_A Conserved archaeal prot 38.9 7.9 0.00027 39.2 0.7 23 1-24 18-40 (453)
151 3lad_A Dihydrolipoamide dehydr 38.7 20 0.00069 36.3 3.8 56 194-253 229-284 (476)
152 1sez_A Protoporphyrinogen oxid 38.2 9 0.00031 39.3 1.0 53 201-254 256-313 (504)
153 3fmw_A Oxygenase; mithramycin, 38.2 19 0.00065 37.8 3.5 64 191-260 153-216 (570)
154 3v76_A Flavoprotein; structura 38.0 7.2 0.00025 39.3 0.2 23 1-24 39-61 (417)
155 2b9w_A Putative aminooxidase; 37.9 7.8 0.00027 38.7 0.4 41 201-249 218-258 (424)
156 2cdu_A NADPH oxidase; flavoenz 37.8 14 0.00049 37.2 2.5 56 192-254 197-252 (452)
157 2gqf_A Hypothetical protein HI 37.5 7.4 0.00025 38.9 0.2 23 1-24 16-38 (401)
158 2e4g_A Tryptophan halogenase; 37.4 29 0.001 36.0 4.8 51 191-247 199-250 (550)
159 2rgh_A Alpha-glycerophosphate 37.2 7.5 0.00026 40.9 0.2 22 1-23 44-65 (571)
160 2hqm_A GR, grase, glutathione 37.1 13 0.00044 38.0 2.0 62 194-259 234-296 (479)
161 1vg0_A RAB proteins geranylger 36.6 8.2 0.00028 41.2 0.4 25 1-26 20-44 (650)
162 1s3e_A Amine oxidase [flavin-c 36.6 8.2 0.00028 39.9 0.4 47 200-253 226-272 (520)
163 2bi7_A UDP-galactopyranose mut 36.4 9.4 0.00032 37.8 0.8 24 1-25 15-38 (384)
164 2yg5_A Putrescine oxidase; oxi 36.4 8.3 0.00029 38.8 0.4 46 200-252 226-271 (453)
165 3oc4_A Oxidoreductase, pyridin 36.3 24 0.00083 35.5 3.9 56 191-254 194-249 (452)
166 3d1c_A Flavin-containing putat 36.2 22 0.00076 34.3 3.5 53 191-251 93-145 (369)
167 2qcu_A Aerobic glycerol-3-phos 36.2 8 0.00027 39.9 0.2 22 1-23 15-36 (501)
168 3c4n_A Uncharacterized protein 36.0 6.5 0.00022 39.2 -0.5 22 1-23 48-71 (405)
169 3i6d_A Protoporphyrinogen oxid 36.0 5.5 0.00019 40.2 -1.1 47 201-254 248-294 (470)
170 3alj_A 2-methyl-3-hydroxypyrid 35.9 9.5 0.00032 37.4 0.7 51 191-251 112-162 (379)
171 2pyx_A Tryptophan halogenase; 35.5 25 0.00086 36.3 3.9 52 190-247 179-231 (526)
172 3k7m_X 6-hydroxy-L-nicotine ox 35.5 26 0.00087 34.8 3.9 23 1-24 13-35 (431)
173 2x3n_A Probable FAD-dependent 35.4 9.1 0.00031 37.8 0.5 23 1-24 18-40 (399)
174 3ihm_A Styrene monooxygenase A 35.4 8.3 0.00029 38.8 0.2 22 1-23 34-55 (430)
175 2gag_A Heterotetrameric sarcos 35.2 51 0.0017 37.0 6.6 60 197-258 327-392 (965)
176 2i0z_A NAD(FAD)-utilizing dehy 35.1 8.5 0.00029 39.0 0.2 23 1-24 38-60 (447)
177 3g3e_A D-amino-acid oxidase; F 34.8 5.6 0.00019 38.6 -1.2 22 1-23 12-39 (351)
178 2wpf_A Trypanothione reductase 34.8 20 0.0007 36.7 3.1 53 194-252 243-295 (495)
179 2vvm_A Monoamine oxidase N; FA 34.7 8.6 0.0003 39.3 0.2 49 197-252 267-315 (495)
180 2gqw_A Ferredoxin reductase; f 34.6 20 0.00067 35.7 2.8 56 194-260 195-250 (408)
181 2xdo_A TETX2 protein; tetracyc 34.6 11 0.00036 37.4 0.8 41 201-248 141-181 (398)
182 4ap3_A Steroid monooxygenase; 34.0 10 0.00034 39.7 0.5 64 191-259 104-169 (549)
183 2e1m_A L-glutamate oxidase; L- 33.8 11 0.00037 37.4 0.7 23 1-24 56-79 (376)
184 3lzw_A Ferredoxin--NADP reduct 32.9 51 0.0017 30.9 5.4 60 191-257 72-132 (332)
185 3ntd_A FAD-dependent pyridine 32.6 37 0.0013 35.2 4.7 64 191-259 197-277 (565)
186 1fec_A Trypanothione reductase 32.4 20 0.00069 36.7 2.5 53 194-252 239-291 (490)
187 4hb9_A Similarities with proba 32.3 12 0.00041 36.7 0.8 22 1-23 13-34 (412)
188 2r0c_A REBC; flavin adenine di 32.2 95 0.0032 32.1 7.8 46 203-252 152-199 (549)
189 3e1t_A Halogenase; flavoprotei 32.2 11 0.00038 38.8 0.5 23 1-24 19-41 (512)
190 2gmh_A Electron transfer flavo 31.8 9.1 0.00031 40.4 -0.3 24 1-25 47-76 (584)
191 1fl2_A Alkyl hydroperoxide red 31.7 34 0.0012 32.0 3.9 54 191-248 61-114 (310)
192 2cul_A Glucose-inhibited divis 31.2 9.6 0.00033 34.6 -0.2 22 1-23 15-36 (232)
193 4fk1_A Putative thioredoxin re 30.9 10 0.00035 35.9 -0.1 56 197-259 191-246 (304)
194 3hyw_A Sulfide-quinone reducta 30.9 44 0.0015 33.3 4.8 60 191-259 205-265 (430)
195 3uox_A Otemo; baeyer-villiger 30.9 15 0.0005 38.4 1.2 53 202-259 105-157 (545)
196 3o0h_A Glutathione reductase; 30.7 19 0.00066 36.7 2.0 59 194-259 240-300 (484)
197 2aqj_A Tryptophan halogenase, 30.6 27 0.00091 36.2 3.1 52 191-248 170-221 (538)
198 2vou_A 2,6-dihydroxypyridine h 30.5 13 0.00043 36.8 0.5 50 199-255 110-159 (397)
199 4gcm_A TRXR, thioredoxin reduc 30.0 10 0.00035 35.9 -0.2 60 197-259 192-253 (312)
200 3fmw_A Oxygenase; mithramycin, 29.6 13 0.00043 39.1 0.4 24 1-25 61-84 (570)
201 3l8k_A Dihydrolipoyl dehydroge 29.5 31 0.0011 34.9 3.3 56 201-259 226-283 (466)
202 1k0i_A P-hydroxybenzoate hydro 29.3 9.7 0.00033 37.5 -0.5 22 1-23 14-35 (394)
203 1w4x_A Phenylacetone monooxyge 29.3 25 0.00086 36.5 2.6 54 201-259 111-164 (542)
204 3qj4_A Renalase; FAD/NAD(P)-bi 28.8 27 0.00091 33.5 2.6 48 200-254 123-170 (342)
205 2vvm_A Monoamine oxidase N; FA 28.5 45 0.0015 33.8 4.4 24 1-25 51-74 (495)
206 3ihg_A RDME; flavoenzyme, anth 28.3 15 0.00053 37.9 0.8 24 1-25 17-40 (535)
207 4a5l_A Thioredoxin reductase; 28.1 11 0.00037 35.6 -0.4 22 1-23 16-37 (314)
208 2ywl_A Thioredoxin reductase r 27.5 13 0.00043 32.0 -0.1 22 1-23 13-34 (180)
209 3lov_A Protoporphyrinogen oxid 27.4 12 0.00043 37.8 -0.1 45 201-254 249-294 (475)
210 3qj4_A Renalase; FAD/NAD(P)-bi 27.4 16 0.00056 35.1 0.7 24 1-24 13-38 (342)
211 3jsk_A Cypbp37 protein; octame 27.4 11 0.00038 36.8 -0.5 24 1-24 91-115 (344)
212 1xdi_A RV3303C-LPDA; reductase 27.1 26 0.00088 35.9 2.2 55 192-253 229-283 (499)
213 4eqs_A Coenzyme A disulfide re 26.9 64 0.0022 32.2 5.2 46 198-247 69-114 (437)
214 3c4a_A Probable tryptophan hyd 26.8 13 0.00046 36.4 -0.0 24 1-25 12-37 (381)
215 1y56_A Hypothetical protein PH 26.8 41 0.0014 34.3 3.7 56 197-259 268-323 (493)
216 2b9w_A Putative aminooxidase; 26.7 23 0.00079 35.1 1.7 24 1-25 18-42 (424)
217 3iwa_A FAD-dependent pyridine 26.6 61 0.0021 32.7 5.0 50 197-254 77-128 (472)
218 2yg5_A Putrescine oxidase; oxi 26.6 41 0.0014 33.6 3.6 24 1-25 17-40 (453)
219 3axb_A Putative oxidoreductase 26.6 8.9 0.0003 38.6 -1.4 21 1-22 35-56 (448)
220 2r9z_A Glutathione amide reduc 26.5 42 0.0014 33.9 3.7 60 194-259 215-276 (463)
221 3c96_A Flavin-containing monoo 26.3 15 0.0005 36.5 0.1 51 200-255 123-175 (410)
222 3i3l_A Alkylhalidase CMLS; fla 26.3 16 0.00054 38.6 0.4 23 1-24 35-57 (591)
223 2iid_A L-amino-acid oxidase; f 26.2 14 0.00047 37.8 -0.1 41 202-247 254-296 (498)
224 3c66_C PRE-mRNA polyadenylatio 26.1 11 0.00036 21.3 -0.5 12 240-252 3-14 (26)
225 2qa1_A PGAE, polyketide oxygen 26.0 15 0.0005 37.9 0.1 24 1-25 23-46 (500)
226 1ges_A Glutathione reductase; 25.7 28 0.00096 35.1 2.2 60 194-259 216-277 (450)
227 3dk9_A Grase, GR, glutathione 25.6 54 0.0019 33.1 4.4 57 194-252 236-296 (478)
228 2vdc_G Glutamate synthase [NAD 25.5 29 0.00098 35.2 2.2 48 198-249 314-378 (456)
229 1onf_A GR, grase, glutathione 25.4 36 0.0012 34.8 3.0 55 192-251 223-277 (500)
230 2qa2_A CABE, polyketide oxygen 25.3 16 0.00054 37.6 0.2 24 1-25 24-47 (499)
231 1cjc_A Protein (adrenodoxin re 25.3 95 0.0032 31.3 6.1 51 199-251 270-335 (460)
232 2r0c_A REBC; flavin adenine di 25.3 17 0.00058 37.9 0.4 24 1-25 38-61 (549)
233 2zbw_A Thioredoxin reductase; 25.1 68 0.0023 30.2 4.8 53 198-258 77-131 (335)
234 3o0h_A Glutathione reductase; 24.7 15 0.00052 37.5 -0.1 21 1-22 38-58 (484)
235 3ics_A Coenzyme A-disulfide re 24.3 42 0.0014 35.1 3.3 57 194-259 236-292 (588)
236 4dsg_A UDP-galactopyranose mut 24.3 16 0.00056 37.3 0.1 44 202-254 230-275 (484)
237 3fbs_A Oxidoreductase; structu 24.1 16 0.00054 33.9 -0.1 53 196-259 184-236 (297)
238 2gjc_A Thiazole biosynthetic e 23.8 15 0.00052 35.5 -0.3 23 1-24 77-101 (326)
239 3k30_A Histamine dehydrogenase 23.6 42 0.0015 36.0 3.2 54 196-255 577-630 (690)
240 1b37_A Protein (polyamine oxid 23.4 19 0.00066 36.5 0.4 41 200-247 228-268 (472)
241 4dna_A Probable glutathione re 23.4 19 0.00064 36.5 0.3 21 1-22 17-37 (463)
242 3ic9_A Dihydrolipoamide dehydr 22.9 20 0.00067 36.8 0.3 22 1-23 20-41 (492)
243 3c96_A Flavin-containing monoo 22.9 1.5E+02 0.0053 28.8 7.1 23 1-24 16-39 (410)
244 2bry_A NEDD9 interacting prote 22.8 20 0.0007 36.8 0.5 23 1-24 104-126 (497)
245 3lad_A Dihydrolipoamide dehydr 22.8 14 0.00047 37.6 -0.9 22 1-23 15-36 (476)
246 1b37_A Protein (polyamine oxid 22.7 86 0.0029 31.5 5.2 24 1-25 16-40 (472)
247 1xhc_A NADH oxidase /nitrite r 22.7 30 0.001 33.8 1.6 58 191-260 188-245 (367)
248 4a9w_A Monooxygenase; baeyer-v 22.6 19 0.00066 34.3 0.2 23 1-24 15-37 (357)
249 3lov_A Protoporphyrinogen oxid 22.5 42 0.0014 33.8 2.8 23 1-24 16-40 (475)
250 3urh_A Dihydrolipoyl dehydroge 22.5 19 0.00065 36.8 0.2 23 1-24 37-59 (491)
251 3cty_A Thioredoxin reductase; 22.0 19 0.00064 34.1 -0.0 21 1-22 28-48 (319)
252 1ojt_A Surface protein; redox- 21.8 44 0.0015 33.9 2.8 57 192-254 232-291 (482)
253 3itj_A Thioredoxin reductase 1 21.4 17 0.0006 34.4 -0.4 22 1-23 34-55 (338)
254 3ab1_A Ferredoxin--NADP reduct 21.4 49 0.0017 31.7 2.9 56 197-258 85-141 (360)
255 3g5s_A Methylenetetrahydrofola 21.3 21 0.00071 35.8 0.1 24 1-25 13-36 (443)
256 2z3y_A Lysine-specific histone 21.2 1.5E+02 0.0051 31.4 6.9 43 200-246 410-455 (662)
257 3ics_A Coenzyme A-disulfide re 21.1 51 0.0018 34.4 3.2 55 197-259 104-160 (588)
258 3i6d_A Protoporphyrinogen oxid 20.7 80 0.0027 31.3 4.5 24 1-25 17-46 (470)
259 3f8d_A Thioredoxin reductase ( 20.6 20 0.00068 33.7 -0.2 21 1-22 27-47 (323)
260 2xag_A Lysine-specific histone 20.2 1.6E+02 0.0056 32.3 7.0 43 200-246 581-626 (852)
261 3ces_A MNMG, tRNA uridine 5-ca 20.1 21 0.00071 38.1 -0.2 22 1-23 40-61 (651)
262 1hyu_A AHPF, alkyl hydroperoxi 20.1 79 0.0027 32.5 4.3 53 191-247 272-324 (521)
263 1lqt_A FPRA; NADP+ derivative, 20.0 90 0.0031 31.4 4.6 49 199-251 265-328 (456)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.3e-94 Score=772.05 Aligned_cols=482 Identities=29% Similarity=0.464 Sum_probs=403.9
Q ss_pred CchhccccccCCCCeEEEEcccCCC--CCCcccccccccccC-CCccceEeeeeccCcccCCCCceeeccCCcccchhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE--NALTDIPETAHYLQF-TKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASV 77 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~--~~~~~~p~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~ 77 (517)
||++|.||||+++.+|||||||+.. .....+|.++..+.. +.++|.|.++||+ +++++.+.|+|||+|||||+
T Consensus 14 G~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~~~rGk~lGGsS~ 89 (566)
T 3fim_B 14 GNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIAYPRGRMLGGSSS 89 (566)
T ss_dssp HHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCBCCCBCBTTGGGG
T ss_pred HHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEeccCCcEEcCccc
Confidence 7999999999899999999999876 234567876655543 7899999999998 78899999999999999999
Q ss_pred hcceeeecCChhhHHHHHHh-CCCCCCccchHHHHHhhccCCCCCC-------CCCCcccCCCceEeecCCCCChhHHHH
Q psy10349 78 INNNIYTRGNPNDFDRWLEA-GNVGWGYKDVLPYFKKSEDIDVPEL-------KRSEYHGVGGYLNVDYSPYKSKLMDAF 149 (517)
Q Consensus 78 ~n~~~~~r~~~~df~~w~~~-g~~~W~~~~l~py~~~~e~~~~~~~-------~~~~~~g~~g~~~~~~~~~~~~~~~~~ 149 (517)
||+|+|+|+.+.|||.|++. |+++|+|++|+|||+|+|++..+.. .++.+||.+||++++++.+..++...|
T Consensus 90 iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~~~~~~~~~ 169 (566)
T 3fim_B 90 VHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRV 169 (566)
T ss_dssp TSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSSCCTHHHHH
T ss_pred ccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCCCCHHHHHH
Confidence 99999999999999999998 9999999999999999999976521 134689999999999988889999999
Q ss_pred HHHHHHc--CCCC-CCCCCCCCCcccccccccccCCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecC--CC-CeEEE
Q psy10349 150 LESAPEV--GLNL-TDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDP--NT-KRVFG 223 (517)
Q Consensus 150 ~~a~~~~--G~~~-~d~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~--~~-~~a~g 223 (517)
+++++++ |++. .|+|++. ..|+++++.++++|.|++++.+||.++++|+||+|++++.|+||++++ ++ ++|+|
T Consensus 170 ~~a~~~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~G 248 (566)
T 3fim_B 170 LATTQEQSEEFFFNPDMGTGH-PLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRC 248 (566)
T ss_dssp HHHHHHTHHHHCBCSCGGGSC-CCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCE
T ss_pred HHHHHHHhcCCCccCCCCCCC-cceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEE
Confidence 9999999 9998 6889888 899999999999999999999999999899999999999999999981 13 69999
Q ss_pred EEEEeC-C-eEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccc
Q psy10349 224 VEFMKN-N-KKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVG 300 (517)
Q Consensus 224 V~~~~~-g-~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~ 300 (517)
|+|... | +.++++|+||||||||||+||||||+|||||+++|+++||++++||| ||+|||||+.+ .+.|.++....
T Consensus 249 Ve~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~-~~~~~~~~~~~ 327 (566)
T 3fim_B 249 VEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL-PAAFFVNSNQT 327 (566)
T ss_dssp EEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE-CCEEEESCSCS
T ss_pred EEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc-eEEEEeCCCcc
Confidence 999863 6 88999999999999999999999999999999999999999999999 99999999997 67787765433
Q ss_pred cchhhhhh-hHHHHHHHHh--ccCC-cccCCccceEEEEecCCCC----------CCCCCCCeeEEeecccchhhhhccc
Q psy10349 301 LVSDRIFS-NLAKETIKAF--TNQG-WTTTLGCEGLGYVRTKYNN----------YPPGVPDIEYIFVPASLAIEEEKGG 366 (517)
Q Consensus 301 ~~~~~~~~-~~~~~~~~~~--~~~G-~~~~~~~~~~~~~~~~~~~----------~~~~~p~~~~~~~~~~~~~~~~~~g 366 (517)
.. ..+.. ........+| .++| ++ ....+..+|+++.... .....|++++++.+.....
T Consensus 328 ~~-~~~~~~~~~~~~~~~~~~~~~G~l~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~------ 399 (566)
T 3fim_B 328 FD-NIFRDSSEFNVDLDQWTNTRTGPLT-ALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQWFHP------ 399 (566)
T ss_dssp SG-GGGTCHHHHHHHHHHHHHHSCSGGG-CCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESSCCCT------
T ss_pred cc-hhhcChHHHHHHHHHHHhcCCCCcc-cChhhheeeeccccchhhhhhhccccccCCCCCEEEEecccchhh------
Confidence 21 00110 1112455677 7889 87 4556778898764210 1124578887654321100
Q ss_pred hhhhhhcCCChhhHHhhhcccCCCCeEEEeeeccccCceeEEEccCCCCCCCceEecCCCCChhhHHHHHHHHHHHHHHh
Q psy10349 367 SLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELS 446 (517)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~ 446 (517)
.+.......++++.+++++|+|||+|+|+|+||++.|+|++|||++|.|++.|+++++.+++++
T Consensus 400 ----------------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~ 463 (566)
T 3fim_B 400 ----------------AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFL 463 (566)
T ss_dssp ----------------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred ----------------cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHH
Confidence 0001112357888888999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 447 KTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 447 ~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
++++++++...+. .|++ ....+|++|++|||+...+.||++||||||+++++++|||++||||||+
T Consensus 464 ~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~ 529 (566)
T 3fim_B 464 SGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVD 529 (566)
T ss_dssp TSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCB
T ss_pred hCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCC
Confidence 9999998765443 4542 1357899999999999999999999999998766569999999999985
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=1.9e-89 Score=734.99 Aligned_cols=480 Identities=26% Similarity=0.398 Sum_probs=371.0
Q ss_pred CchhccccccCCCCeEEEEcccCCCC---CCcccccccccccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEEN---ALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASV 77 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~ 77 (517)
||++|.||||+++.+|||||||++.. +...+|..+..++.+.++|.|.++||. ..++.+.|+|||+|||||+
T Consensus 31 G~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~~~~~rGk~LGGsS~ 105 (583)
T 3qvp_A 31 GLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQTALIRSGNGLGGSTL 105 (583)
T ss_dssp HHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCCCEECCBCSTTGGGG
T ss_pred HHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCeeeccCceecCCcCc
Confidence 79999999998899999999999432 223456555555577899999999985 4678899999999999999
Q ss_pred hcceeeecCChhhHHHHHHhCCC-CCCccchHHHHHhhccCCCCC--------CCCCCcccCCCceEeecC---CCCChh
Q psy10349 78 INNNIYTRGNPNDFDRWLEAGNV-GWGYKDVLPYFKKSEDIDVPE--------LKRSEYHGVGGYLNVDYS---PYKSKL 145 (517)
Q Consensus 78 ~n~~~~~r~~~~df~~w~~~g~~-~W~~~~l~py~~~~e~~~~~~--------~~~~~~~g~~g~~~~~~~---~~~~~~ 145 (517)
||+|+|.|+.+.|||.|+++|++ +|+|++|+|||+|+|++..+. ..+..+||.+||+.++++ .+..++
T Consensus 106 iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~~ 185 (583)
T 3qvp_A 106 VNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPI 185 (583)
T ss_dssp TSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBCCCCSSCBCTH
T ss_pred ccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecCCCCcccCCHH
Confidence 99999999999999999999877 999999999999999987542 124568999999999876 244688
Q ss_pred HHHHHHHHHHcCCCC-CCCCCCCCCccccccccccc-CCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCC--CCeE
Q psy10349 146 MDAFLESAPEVGLNL-TDYNSPDGNVGFSRIQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPN--TKRV 221 (517)
Q Consensus 146 ~~~~~~a~~~~G~~~-~d~~~~~~~~g~~~~~~~~~-~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~--~~~a 221 (517)
.+.|+++++++|++. .|+|++. +.|++.++.++. +|.|++++.+||.|+++|+||+|++++.|+||+++++ +++|
T Consensus 186 ~~~~~~a~~~~G~~~~~D~n~~~-~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra 264 (583)
T 3qvp_A 186 VKALMSAVEDRGVPTKKDFGCGD-PHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRA 264 (583)
T ss_dssp HHHHHHHHHTTTCCBCCCTTSSC-CCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEE
T ss_pred HHHHHHHHHHcCCCcCCCCCCCC-CceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEE
Confidence 999999999999998 6899988 899998888875 7999999999999999999999999999999999842 5799
Q ss_pred EEEEEE-eCCeEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCccccccccCcCCcceEEEEccccc
Q psy10349 222 FGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVG 300 (517)
Q Consensus 222 ~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlpVG~nl~dH~~~~~~~~~~~~~~~ 300 (517)
+||++. .+|+.++++|+||||||||||+||||||+|||||+++|+++||++++|||||+|||||+.+ .+.|.++....
T Consensus 265 ~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLqDH~~~-~~~~~~~~~~~ 343 (583)
T 3qvp_A 265 VGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQTTA-TVRSRITSAGA 343 (583)
T ss_dssp EEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBBCCEEE-EEEEEECGGGC
T ss_pred EEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchhhCccc-eEEEEecCCcc
Confidence 999998 5899999999999999999999999999999999999999999999999999999999997 77887764311
Q ss_pred --------cchhhhhhhHHHHHHHHh--ccCC-cccCCccceEEEEecCCCCCCCCCCCeeEEeecccchhhhhccchhh
Q psy10349 301 --------LVSDRIFSNLAKETIKAF--TNQG-WTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLL 369 (517)
Q Consensus 301 --------~~~~~~~~~~~~~~~~~~--~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~ 369 (517)
.....+.... ......| ...+ +.. ...+..+|.+. ++++..+... . +. +
T Consensus 344 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~---~---~~---~ 403 (583)
T 3qvp_A 344 GQGQAAWFATFNETFGDY-SEKAHELLNTKLEQWAE-EAVARGGFHNT---------TALLIQYENY---R---DW---I 403 (583)
T ss_dssp SBCEEEEEEEHHHHHGGG-HHHHHHHHHHCHHHHHH-HHHHTTSCSCH---------HHHHHHHHHH---H---HH---H
T ss_pred ccccccccccHHHhhccc-hHHHHHHHHhhcchhhc-ccccccCcccc---------HHHHhhhccc---h---hh---h
Confidence 0000010000 0111122 1111 110 00000001000 0111000000 0 00 0
Q ss_pred hhhcCCChhhHHhhhcccCCCCeEEEeeeccccCceeEEEccCCCCCCCceE-ecCCCCChhhHHHHHHHHHHHHHHhcC
Q psy10349 370 RKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAV-QSNFFQDPLDLLRIVEGIKMVIELSKT 448 (517)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~i-~~~y~~~~~D~~~~~~~~~~~~~i~~~ 448 (517)
.. ...+ .. +++... ...+++..+.++|+|||+|+|+|+||++.|+| ++||+++|.|++.++++++++++|+++
T Consensus 404 ~~-~~~~--~~-~~~~~~--~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~ 477 (583)
T 3qvp_A 404 VN-HNVA--YS-ELFLDT--AGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNS 477 (583)
T ss_dssp HH-SCCE--EE-EEEEEC--TTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTS
T ss_pred cc-CCCC--cc-eeeecc--CCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 00 0000 00 000000 12344444558999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 449 NAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 449 ~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
++|+.+...+ ..|++......+|++|++|+|+...+.||++||||||++++ ++|||++||||||+
T Consensus 478 ~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~ 542 (583)
T 3qvp_A 478 GAMQTYFAGE---TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGVQ 542 (583)
T ss_dssp TTHHHHEEEE---EESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCB
T ss_pred cchhhccccc---cCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecCC
Confidence 9999887543 46776554567999999999999999999999999998654 59999999999985
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=7.7e-87 Score=715.41 Aligned_cols=475 Identities=28% Similarity=0.447 Sum_probs=384.8
Q ss_pred CchhccccccCCCCeEEEEcccCCCC---CCcccccccccccCCCccceEeeeeccCcccCCCCceee------ccCCcc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEEN---ALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCP------WPAGRA 71 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~------~~~g~~ 71 (517)
||++|.||||+++.+|||||||+... +...+|..+..++.+.++|.|.++.+ ++.+. |+|||+
T Consensus 18 G~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~~--------~r~~~~~~~~~~~rGkv 89 (577)
T 3q9t_A 18 GNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTMV--------RRDDYERIEKPNTRGKT 89 (577)
T ss_dssp HHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEEE--------EETTEEEEEEEECCBCS
T ss_pred HHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEEC--------Ccccccccccccccccc
Confidence 79999999997668999999998732 34567887777778889999998732 34444 999999
Q ss_pred cchhhhhcceeeecCChhhHHHHHHhCCCCCCccchHHHHHhhccCCCCCC---CCCCcccCCCceEeecCCCCC---hh
Q psy10349 72 VGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVPEL---KRSEYHGVGGYLNVDYSPYKS---KL 145 (517)
Q Consensus 72 lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~py~~~~e~~~~~~~---~~~~~~g~~g~~~~~~~~~~~---~~ 145 (517)
|||||++|+|+|.|+.+.|||.|++.|+++|+|++|+|||+|+|++..+.. .+...||.+||+.++.+.+.. ++
T Consensus 90 LGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~~ 169 (577)
T 3q9t_A 90 LGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELIDEMAPF 169 (577)
T ss_dssp TTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEECCCCGGGHHH
T ss_pred ccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeCCCCCcccchH
Confidence 999999999999999999999999999999999999999999999875421 123368999999999876643 47
Q ss_pred HHHHHHHHHHcCCCC-CCCCCCCCCcccccccccccCCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEE
Q psy10349 146 MDAFLESAPEVGLNL-TDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGV 224 (517)
Q Consensus 146 ~~~~~~a~~~~G~~~-~d~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV 224 (517)
.+.|.++++++|++. .|+|++. ..|+++++.++..|.|++++ .|+ .+|+||+|++++.|+||++++++++|+||
T Consensus 170 ~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~s~~-~~l---~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV 244 (577)
T 3q9t_A 170 RENLTKAWKSMGQPLIENIYDGE-MDGLTHCCDTIYRGQRSGSF-LFV---KNKPNITIVPEVHSKRLIINEADRTCKGV 244 (577)
T ss_dssp HHHHHHHHHHTTCCBCSCCSSSC-CCEEEECEESEETTEECCGG-GGS---SSCTTEEEECSEEEEEEEEETTTTEEEEE
T ss_pred HHHHHHHHHHcCCCcCCCCCCCC-cCeEEeecceecCCeEeeHH-HHH---hcCCCeEEEcCcEEEEEEEeCCCCEEEEE
Confidence 788999999999998 6889888 89999999999999999865 464 57899999999999999998656799999
Q ss_pred EEEeC-CeEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccccc
Q psy10349 225 EFMKN-NKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVGLV 302 (517)
Q Consensus 225 ~~~~~-g~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~~~ 302 (517)
++... |+.++++|+||||||||+|+||+|||+|||||+++|+++||++++||| ||+|||||+.+ .+.|.+++.....
T Consensus 245 ~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~-~~~~~~~~~~~~~ 323 (577)
T 3q9t_A 245 TVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGV-PFVLRVKDGFGMD 323 (577)
T ss_dssp EEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEE-EEEEEECTTSSSH
T ss_pred EEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcce-eEEEEeCCCCccc
Confidence 99874 889999999999999999999999999999999999999999999999 99999999997 7888877654321
Q ss_pred hhhhhh--hHHHHHHHHh--ccCC-cccCCccceEEEEecCC-------------------CCCCCCCCCeeEEeecccc
Q psy10349 303 SDRIFS--NLAKETIKAF--TNQG-WTTTLGCEGLGYVRTKY-------------------NNYPPGVPDIEYIFVPASL 358 (517)
Q Consensus 303 ~~~~~~--~~~~~~~~~~--~~~G-~~~~~~~~~~~~~~~~~-------------------~~~~~~~p~~~~~~~~~~~ 358 (517)
..+.. ........+| .++| ++ .+..+..+|.++.. ...+...|++++.+.+...
T Consensus 324 -~~~~~~~~~~~~~~~~y~~~~~Gpl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 401 (577)
T 3q9t_A 324 -DVLLRHGPKRDAVVSAYNKNRSGPVG-SGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQPHFELDFVCMFG 401 (577)
T ss_dssp -HHHTSCSHHHHHHHHHHHHHSCSGGG-CCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTSCCSEEEEEESSCC
T ss_pred -hhhhcchhHHHHHHHHHHhcCCCCcc-cchhheeEEeecChhhhcchhhhhhhhccccccccCCCCCceEEEEeccccc
Confidence 11111 1112456677 6788 77 45556677765421 0012345778776654211
Q ss_pred hhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEEEeeeccccCcee-EEEccCCCCCCCceEecCCCCChhhHHHHHH
Q psy10349 359 AIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRG-YVRLKSADPMVYPAVQSNFFQDPLDLLRIVE 437 (517)
Q Consensus 359 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG-~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~ 437 (517)
.. . .. .+.......++++.+++++|+||| +|+|+|+||++.|+|++||+++|.|++.+++
T Consensus 402 ~~--------~----~~-------~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~ 462 (577)
T 3q9t_A 402 TA--------F----QW-------HFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMRE 462 (577)
T ss_dssp GG--------G----CS-------SSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHH
T ss_pred cc--------c----cc-------cccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHH
Confidence 00 0 00 000111235688888999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHh-cCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeecc
Q psy10349 438 GIKMVIELS-KTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516 (517)
Q Consensus 438 ~~~~~~~i~-~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv 516 (517)
+++++++|+ ++++++.+...+. .|+. ...+|++|++|||+...+.||++||||||++++ +||||++||||||
T Consensus 463 ~~~~~~~i~~~~~~~~~~~~~e~---~p~~---~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv 535 (577)
T 3q9t_A 463 GIRFSYDLLFKGEGFKDLVESEY---PWEM---PLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID-QGVVDPKLKVHGI 535 (577)
T ss_dssp HHHHHHHHHHHSTTGGGTEEEEE---SSCC---CTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-TCSBCTTCBBTTC
T ss_pred HHHHHHHHHHhChhhhhcccccc---CCCC---CcCCHHHHHHHHHhccccccccccceecCCCCC-CceECCCCeEeCC
Confidence 999999999 8899988765443 4443 357999999999999999999999999998655 6999999999998
Q ss_pred C
Q psy10349 517 K 517 (517)
Q Consensus 517 ~ 517 (517)
+
T Consensus 536 ~ 536 (577)
T 3q9t_A 536 K 536 (577)
T ss_dssp B
T ss_pred C
Confidence 5
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.2e-81 Score=679.91 Aligned_cols=487 Identities=25% Similarity=0.358 Sum_probs=371.2
Q ss_pred CchhccccccCCCCeEEEEcccCCCCC--Ccc-cccccccccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENA--LTD-IPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASV 77 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~--~~~-~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~ 77 (517)
|+++|.||+++++++|||||+|+.... ... +|..+..++.+.++|.|.++| ++.++.+.|+|||+|||||+
T Consensus 36 g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~~~~~rGk~lGGsS~ 109 (587)
T 1gpe_A 36 GLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRTNNIKAGKGLGGSTL 109 (587)
T ss_dssp HHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCCCEECCBCSTTGGGG
T ss_pred HHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCceeeeecccccccccc
Confidence 689999999988999999999986632 234 676655555567899999887 35678899999999999999
Q ss_pred hcceeeecCChhhHHHHHHh-CCCCCCccchHHHHHhhccCCCCCC--------CCCCcccCCCceEeecC---CCCChh
Q psy10349 78 INNNIYTRGNPNDFDRWLEA-GNVGWGYKDVLPYFKKSEDIDVPEL--------KRSEYHGVGGYLNVDYS---PYKSKL 145 (517)
Q Consensus 78 ~n~~~~~r~~~~df~~w~~~-g~~~W~~~~l~py~~~~e~~~~~~~--------~~~~~~g~~g~~~~~~~---~~~~~~ 145 (517)
||+|+|+|+.+.|||.|++. |+++|+|++|+|||+|+|+++++.. .++.+||.+||++++++ .+..+.
T Consensus 110 in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~~~~~~~~~~~ 189 (587)
T 1gpe_A 110 INGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPI 189 (587)
T ss_dssp TSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBCCCCSSCBCTH
T ss_pred ccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEccCCCcCCCCHH
Confidence 99999999999999999998 9999999999999999999987521 14568999999999865 356788
Q ss_pred HHHHHHHHHHcCCCC-CCCCCCCCCccccccccccc-CCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCCC--CeE
Q psy10349 146 MDAFLESAPEVGLNL-TDYNSPDGNVGFSRIQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNT--KRV 221 (517)
Q Consensus 146 ~~~~~~a~~~~G~~~-~d~~~~~~~~g~~~~~~~~~-~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~~--~~a 221 (517)
.+.|.++++++|++. .|+|++. +.|++.|+.++. +|.|+|++.+||.++.+++|++|++++.|+||++++++ ++|
T Consensus 190 ~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~ 268 (587)
T 1gpe_A 190 MKALMNTVSALGVPVQQDFLCGH-PRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQA 268 (587)
T ss_dssp HHHHHHHHHHTTCCBSCCTTSSC-CCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHcCCCcCCCCCCCC-CCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEE
Confidence 999999999999998 6899888 889999988764 78999999999988888999999999999999998432 589
Q ss_pred EEEEEE-eCCeEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCccccccccCcCCcceEEEEccccc
Q psy10349 222 FGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVG 300 (517)
Q Consensus 222 ~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlpVG~nl~dH~~~~~~~~~~~~~~~ 300 (517)
+||++. .+|+.++|+|+|+||||||+|+||+|||+|||||+++|+++||++++|||||+|||||+.+ .+.+.+++...
T Consensus 269 ~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH~~~-~~~~~~~~~~~ 347 (587)
T 1gpe_A 269 VGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTTT-TVSSRASSAGA 347 (587)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCCEEE-EEEEEECGGGC
T ss_pred EEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcCccc-ceEEEeCCCcc
Confidence 999998 6899999999889999999999999999999999999999999999999999999999997 67777765422
Q ss_pred cchhhhhhhHHHHHHHHh--ccCC-cccCCccceEEEEecCCCCCCCCCCCeeEEeecccchhhhhccchhhhhhcCCCh
Q psy10349 301 LVSDRIFSNLAKETIKAF--TNQG-WTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPD 377 (517)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~--~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 377 (517)
....... .. ....+| .++| ++ ....+...|.+...... ..+... .+.. ++...+........
T Consensus 348 ~~~~~~~-~~--~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~--~~~~~~------~~~~---~~~~~~~~~~~~~~ 412 (587)
T 1gpe_A 348 GQGQAVF-FA--NFTETFGDYAPQARD-LLNTKLDQWAEETVARG--GFHNVT------ALKV---QYENYRNWLLDEDV 412 (587)
T ss_dssp SBCEEEE-EE--EHHHHHGGGHHHHHH-HHHHSHHHHHHHHHHTT--SCSCHH------HHHH---HHHHHHHHHHHSCC
T ss_pred cccchHH-HH--HHHHHHHhCCCCCcc-ccccceeeEeecccccc--cccccc------cccc---cHHHHhhhccCCCC
Confidence 1100000 00 112233 2333 22 11111111221100000 000000 0000 00000000000000
Q ss_pred hhHHhhhcccCCCCeEEEeeeccccCceeEEEccCCCCCCCc-eEecCCCCChhhHHHHHHHHHHHHHHhcCchhhhhhh
Q psy10349 378 RTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYP-AVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKS 456 (517)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P-~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~ 456 (517)
...+.++. ....+++...+++|+|||+|+|+|+||++.| +|+++|+.+|.|++.++++++.+++|+++.+++.+..
T Consensus 413 ~~~~~~~~---~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~ 489 (587)
T 1gpe_A 413 AFAELFMD---TEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFA 489 (587)
T ss_dssp EEEEEEEE---CTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEE
T ss_pred cceeeeec---CCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcc
Confidence 00000000 1245777788899999999999999999999 9999999999999999999999999999999888765
Q ss_pred ccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 457 KLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 457 ~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
.+ ..|+.......+|++|++|+|+...+.+|++||||||++++ +||||++|||||++
T Consensus 490 ~~---~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~-~sVVD~~lrV~Gv~ 546 (587)
T 1gpe_A 490 GE---TLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSREL-GGVVDATAKVYGTQ 546 (587)
T ss_dssp EE---EESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCB
T ss_pred cc---cCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCC-CceECCCCEEECCC
Confidence 33 24554322347899999999999999999999999997643 59999999999985
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=9.5e-78 Score=645.05 Aligned_cols=453 Identities=30% Similarity=0.506 Sum_probs=369.6
Q ss_pred CchhccccccCCCCeEEEEcccCCCC-CCcccccccccccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhhhc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEEN-ALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASVIN 79 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~-~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~n 79 (517)
|||+|.||||++++||||||||+... .....|..+..++.+.++|.|.++||. ++.++.+.|+|||+|||||+||
T Consensus 29 G~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~----~~~~~~~~~~rG~~lGGsS~in 104 (526)
T 3t37_A 29 GSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQA----GTAGRAHHWARGRLIGGSSCLH 104 (526)
T ss_dssp HHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBG----GGTTBCCEECCBCBTTGGGGTS
T ss_pred HHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccC----CCCCCeEeccCccEECcHHHHh
Confidence 79999999998999999999998754 345667777777788999999999998 7888999999999999999999
Q ss_pred ceeeecCChhhHHHHHHh-CCCCCCccchHHHHHhhccCCCCCCCCCCcccCCCceEeecCC-CCChhHHHHHHHHHHcC
Q psy10349 80 NNIYTRGNPNDFDRWLEA-GNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSP-YKSKLMDAFLESAPEVG 157 (517)
Q Consensus 80 ~~~~~r~~~~df~~w~~~-g~~~W~~~~l~py~~~~e~~~~~~~~~~~~~g~~g~~~~~~~~-~~~~~~~~~~~a~~~~G 157 (517)
+|+|+|+.+.|||.|++. ++.+|+|++++|||+++|++... ....++..|++.+.... ...|+.+.|.++++++|
T Consensus 105 ~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~---~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~G 181 (526)
T 3t37_A 105 AMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG---GDGIHGKGGPLPIHLPADEVSPLARAFIEAGASLG 181 (526)
T ss_dssp CCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT---TSSSSCSSCSEECBCCSTTSCHHHHHHHHHHHHTT
T ss_pred hCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC---CccccCcCCCcCcccccccCCHHHHHHHHHHHHcC
Confidence 999999999999999875 78999999999999999998764 45578888998877544 35788999999999999
Q ss_pred CCC-CCCCCCCCCcccccccccccCCcccchhhhhhcc-cCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEE
Q psy10349 158 LNL-TDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRP-IVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVV 235 (517)
Q Consensus 158 ~~~-~d~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~-~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v 235 (517)
++. .+.+.+. +.+++.|...+..|.|.++..+|+.+ +..|+||+|++++.|+||+++ +++|+||++...+...++
T Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~--~~~a~gv~~~~~~~~~~~ 258 (526)
T 3t37_A 182 LPRLEGHNSGE-MIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE--GNQVRSLEVVGRQGSAEV 258 (526)
T ss_dssp CCBCSSSCSSC-CBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE--TTEEEEEEEEETTEEEEE
T ss_pred CCcccCCCCCc-ccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec--CCeEEEEEEEecCceEEE
Confidence 998 5777777 88888888899999999999999866 457999999999999999998 679999999988888889
Q ss_pred EecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccccchhhhhhhHHHHH
Q psy10349 236 YAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKET 314 (517)
Q Consensus 236 ~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (517)
.| ||||||||||+||+|||+|||||+++|+++||++++||| ||+|||||+......+....+.... .
T Consensus 259 ~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~~~~--~--------- 326 (526)
T 3t37_A 259 FA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPVPPS--R--------- 326 (526)
T ss_dssp EE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCCCCC--S---------
T ss_pred ee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCcchH--h---------
Confidence 88 799999999999999999999999999999999999999 9999999987522333333322110 0
Q ss_pred HHHhccCCcccCCccceEEEEecCCCCCCCCCCCeeEEeecccchhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEE
Q psy10349 315 IKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWS 394 (517)
Q Consensus 315 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (517)
........|...... .....|++++.+....... . .+........++
T Consensus 327 -----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~-----------~~~~~~~~~~~~ 373 (526)
T 3t37_A 327 -----------LQHSESMAYMRADSF-TAAGQPEIVVGCGVAPIVS----------E-----------SFPAPAAGSAYS 373 (526)
T ss_dssp -----------SCSEEEEEEECSSCS-SCCSSCCEEEEEESSCCCC----------T-----------TSCCCCTTSEEE
T ss_pred -----------hcchhhhhhhhcccc-cccCCcceeeecccccccc----------c-----------ccccccCCccee
Confidence 011122233332211 1123355554332211100 0 011111235677
Q ss_pred EeeeccccCceeEEEccCCCCCCCceEecCCCCChhhHHHHHHHHHHHHHHhcCchhhhhhhccccccCCCCcCCCCCCH
Q psy10349 395 IWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSD 474 (517)
Q Consensus 395 ~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~s~ 474 (517)
+...+++|.|||+|+|+++||.+.|+|+++|+.++.|++.++++++.+++++.+++++.+...+ ..|++ ..++
T Consensus 374 ~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~---~~pg~----~~~~ 446 (526)
T 3t37_A 374 LLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE---LLPGT----PNSA 446 (526)
T ss_dssp EEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE---CSSCC----CCSH
T ss_pred eeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc---cCCCC----CCCH
Confidence 7788899999999999999999999999999999999999999999999999999888876544 36664 3589
Q ss_pred HHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 475 DYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 475 ~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
+++++|+|+...+.||++||||||+ |++||||++|||||++
T Consensus 447 ~~~~~~ir~~~~t~~H~~GTcrMG~--d~~sVVD~~~rV~Gv~ 487 (526)
T 3t37_A 447 AEMDDFIARSVITHHHPCGTCRMGK--DPDAVVDANLRLKALD 487 (526)
T ss_dssp HHHHHHHHHHEEECSCCBCTTCBCS--STTCSBCTTCBBTTCS
T ss_pred HHHHHHHHhcCccCcccCccccCCC--CCCccCCCCCEEcCCC
Confidence 9999999999999999999999995 4579999999999985
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.9e-77 Score=642.69 Aligned_cols=459 Identities=28% Similarity=0.432 Sum_probs=375.9
Q ss_pred CchhccccccCCCCeEEEEcccCCCCC--CcccccccccccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENA--LTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASVI 78 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~--~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~ 78 (517)
|+++|.||+++++.+|||||+|+.... ..++|..+..++.+.++|.|.++|++ + .++.+.++|||+|||||++
T Consensus 25 G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~----~-~~~~~~~~rGk~lGGsS~i 99 (546)
T 2jbv_A 25 GAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQE----N-GNSFMRHARAKVMGGCSSH 99 (546)
T ss_dssp HHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCS----S-SCTTCEECCBCSTTGGGGT
T ss_pred HHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccC----C-CCceEEeecccccccCccc
Confidence 689999999965999999999986642 24556544433456789999999987 4 6788999999999999999
Q ss_pred cceeeecCChhhHHHHHH-hCCCCCCccchHHHHHhhccCCCCCCCCCCcccCCCceEeecCCCCChhHHHHHHHHHHcC
Q psy10349 79 NNNIYTRGNPNDFDRWLE-AGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVG 157 (517)
Q Consensus 79 n~~~~~r~~~~df~~w~~-~g~~~W~~~~l~py~~~~e~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~a~~~~G 157 (517)
|+|+|+|+.+.||+.|++ +|+++|+|++|+|||+|+|+++++. .+..+||..||+++..+.+..+..+.|.++++++|
T Consensus 100 n~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~-~~~~~~g~~Gpl~v~~~~~~~~~~~~~~~a~~~~G 178 (546)
T 2jbv_A 100 NSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAG 178 (546)
T ss_dssp SCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB-TTBTTSCBSCSEEEEECCSCCHHHHHHHHHHHHTT
T ss_pred cceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC-CccccCCCCCCEEEecCCCCCHHHHHHHHHHHHCC
Confidence 999999999999999998 7999999999999999999988631 11458999999999887778899999999999999
Q ss_pred CCCCCCCCCC-CCccccccccccc-CCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeC--CeEE
Q psy10349 158 LNLTDYNSPD-GNVGFSRIQGTIQ-FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN--NKKR 233 (517)
Q Consensus 158 ~~~~d~~~~~-~~~g~~~~~~~~~-~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~--g~~~ 233 (517)
++..|+|+.. .+.|++.|+.+|. +|.|+++..+||.++.+++|++|++++.|++|+++++ ++++||++... |+.+
T Consensus 179 ~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~ 257 (546)
T 2jbv_A 179 IPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTH 257 (546)
T ss_dssp CCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEE
T ss_pred CCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEE
Confidence 9887666543 1678999999998 9999999999999988889999999999999999842 78999999865 8888
Q ss_pred EEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccccchhhhhhhHHH
Q psy10349 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAK 312 (517)
Q Consensus 234 ~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (517)
+++|+|+||||||+|+||+||++|||||+++|+++||++++||| ||+|||||+.+ .+.+.++.+... .
T Consensus 258 ~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~-~~~~~~~~~~~~----~------ 326 (546)
T 2jbv_A 258 RLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEG-VVQFEAKQPMVA----E------ 326 (546)
T ss_dssp EEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEC-CEEEEESSCCCS----C------
T ss_pred EEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccc-eEEEEecCCCcc----c------
Confidence 99998899999999999999999999999999999999999999 99999999997 677776643110 0
Q ss_pred HHHHHhccCCcccCCccceEEEEecCCCCCCCCCCCeeEEeecccchhhhhccchhhhhhcCCChhhHHhhhcccCCCCe
Q psy10349 313 ETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDA 392 (517)
Q Consensus 313 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (517)
. ....+..+|.+... ....|++++.+.+..... . . ...+. . .....
T Consensus 327 -------~-----~~~~~~~~f~~~~~---~~~~p~~~~~~~~~~~~~---~----~-~~~g~----------~-~~~~~ 372 (546)
T 2jbv_A 327 -------S-----TQWWEIGIFTPTED---GLDRPDLMMHYGSVPFDM---N----T-LRHGY----------P-TTENG 372 (546)
T ss_dssp -------C-----SSSCCEEEEECSST---TCSSCSEEEEEESSCCCT---T----T-GGGTC----------C-CCSSE
T ss_pred -------c-----cchhheEEEEecCC---CCCCCceEEEeccccccc---c----c-cccCc----------c-CCCCe
Confidence 0 11223446665431 123578887665432100 0 0 00000 0 11246
Q ss_pred EEEeeeccccCceeEEEccCCCCCCCceEecCCCCChh--hHHHHHHHHHHHHHHhcCchhhhhhhccccccCCCCcCCC
Q psy10349 393 WSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPL--DLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHK 470 (517)
Q Consensus 393 ~~~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~ 470 (517)
+++...+++|+|||+|+|+|+||++.|+|+++|+.+|. |++.++++++.+++++++.+++.+...+. .|++ .
T Consensus 373 ~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~p~~---~ 446 (546)
T 2jbv_A 373 FSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGREL---SPGV---E 446 (546)
T ss_dssp EEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEE---ESCT---T
T ss_pred EEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccc---cCCC---C
Confidence 77777889999999999999999999999999999999 99999999999999999998888764332 4553 3
Q ss_pred CCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 471 YGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 471 ~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
..+|++|++|+|+...+.+|++||||||+..|++||||++|||||++
T Consensus 447 ~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 493 (546)
T 2jbv_A 447 AQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVT 493 (546)
T ss_dssp CCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSB
T ss_pred CCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCC
Confidence 57899999999999999999999999997555689999999999985
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=5.7e-65 Score=544.71 Aligned_cols=423 Identities=25% Similarity=0.347 Sum_probs=300.9
Q ss_pred CchhccccccCCCCeEEEEcccCCCC--CCcccccccc-cccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEEN--ALTDIPETAH-YLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASV 77 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~--~~~~~p~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~ 77 (517)
||++|.|||| +.+|||||+|+... .....|..+. .+.. .+| |.+.||. ...++.+.+++||+|||||+
T Consensus 38 G~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~--~~~-~~t~~q~----~~~~~~~~~~rg~~lGGsS~ 108 (536)
T 1ju2_A 38 GCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ--EDD-GKTPVER----FVSEDGIDNVRGRVLGGTSI 108 (536)
T ss_dssp HHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS--CCC-SSSSEEE----EECTTSCEEEEECBTTGGGG
T ss_pred HHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC--CCc-CcCCCcc----ccCCCcceeecceecccccc
Confidence 7899999999 89999999998642 2222332221 1111 234 6666765 44567788999999999999
Q ss_pred hcceeeecCChhhHHHHHHhCCCCCCccchHHHHHhhccCCCCCCCCCCcccCCCceEeecCCCCChhHHHHHHHHHHcC
Q psy10349 78 INNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVG 157 (517)
Q Consensus 78 ~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~py~~~~e~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~a~~~~G 157 (517)
||+|+|+|+.+.||+.+ | .+|+|++++|||+++|+.+... +...+....|.++++++|
T Consensus 109 in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~------------------~~~~~~~~~~~~a~~~~G 166 (536)
T 1ju2_A 109 INAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK------------------PNSQSWQSVTKTAFLEAG 166 (536)
T ss_dssp TSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC------------------CCCCHHHHHHHHHHHHTT
T ss_pred ccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC------------------CCCCcHHHHHHHHHHHcC
Confidence 99999999999999742 2 2499999999999999864320 123467788999999999
Q ss_pred CCC-CCCCCCCCCccc--ccccccccCCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCC-CCeEEEEEEEe-CCeE
Q psy10349 158 LNL-TDYNSPDGNVGF--SRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPN-TKRVFGVEFMK-NNKK 232 (517)
Q Consensus 158 ~~~-~d~~~~~~~~g~--~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~-~~~a~gV~~~~-~g~~ 232 (517)
++. ...+... ..|+ +.+. .+.+|.|+++.. |+.. .+++|++|++++.|+||+++++ +++|+||++.+ +|+.
T Consensus 167 ~~~~~~~~~~~-~~g~~~g~~~-~~~~g~r~s~~~-~~~~-~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~ 242 (536)
T 1ju2_A 167 VHPNHGFSLDH-EEGTRITGST-FDNKGTRHAADE-LLNK-GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTP 242 (536)
T ss_dssp CCCEEEECCBC-CSEEEECEES-BCTTSBBCCGGG-GGGG-SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCE
T ss_pred CCCCCCcccCC-CCCceeeeEE-ECCCCeEecHHH-hhhh-hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCce
Confidence 864 1111111 1121 1111 125789998877 7755 5789999999999999999852 25899999985 6776
Q ss_pred EEEE--ecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccccchhhhhhh
Q psy10349 233 RVVY--AKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVGLVSDRIFSN 309 (517)
Q Consensus 233 ~~v~--a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~ 309 (517)
++++ ++|+||||||+|+||+|||+|||||+++|+++||++++||| ||+|||||+.+ .+.+.++.+......... .
T Consensus 243 ~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~-~~~~~~~~~~~~~~~~~~-~ 320 (536)
T 1ju2_A 243 HQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRN-FINILPPNPIEPTIVTVL-G 320 (536)
T ss_dssp EEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEE-EEEECCSSCCCCCCCCEE-E
T ss_pred EEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcce-eEEEEeCCCcccccchhh-h
Confidence 6664 77899999999999999999999999999999999999999 99999999986 565554432210000000 0
Q ss_pred HHHHHHHHh--ccCCcccCCccceEEEEecCCCCCCCCCCCeeEEeecccchhhhhccchhhhhhcCCChhhHHhhhccc
Q psy10349 310 LAKETIKAF--TNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDV 387 (517)
Q Consensus 310 ~~~~~~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (517)
. ..+| .+.| ++.. ..+.+. +.+ . .. ...
T Consensus 321 ~----~~~~~~~~~g-----------~~~~-------~~~~~~--~~~----~----~~------------------~~~ 350 (536)
T 1ju2_A 321 I----SNDFYQCSFS-----------SLPF-------TTPPFG--FFP----S----SS------------------YPL 350 (536)
T ss_dssp E----CSSEEEEEEE-----------ECCC-------SSCCBT--TBS----S----SC------------------CCC
T ss_pred H----HHHHHHcCCC-----------CCCC-------Chhhhe--eec----C----cc------------------cCC
Confidence 0 0001 0001 1000 000000 000 0 00 001
Q ss_pred CCCCeEEEeeeccccCceeEEEc-cCCCCCCCceEecCCCCChhhHHHHHHHHHHHHHHhcCchhhhhhhccccccCCCC
Q psy10349 388 KNKDAWSIWPMLMYPESRGYVRL-KSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPAC 466 (517)
Q Consensus 388 ~~~~~~~~~~~~~~P~srG~V~L-~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~ 466 (517)
.......+...+++|+|||+|+| +|+||++.|+|+++|+.+|.|++.++++++.+++++++++++.+...+. ...|++
T Consensus 351 ~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~p~~ 429 (536)
T 1ju2_A 351 PNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDL-PGVEGF 429 (536)
T ss_dssp CSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCC-STTCSC
T ss_pred CCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhcccc-ccCCCc
Confidence 11122234556689999999999 8999999999999999999999999999999999999999888765431 112322
Q ss_pred cC------CCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 467 KK------HKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 467 ~~------~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
.. ....++++|++|+|+...+.||++|||||| +|||++|||||++
T Consensus 430 ~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~ 480 (536)
T 1ju2_A 430 NILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGIN 480 (536)
T ss_dssp CBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCB
T ss_pred cccccCCCcccCCHHHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCC
Confidence 10 014589999999999999999999999999 6999999999985
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.3e-60 Score=513.62 Aligned_cols=444 Identities=22% Similarity=0.300 Sum_probs=311.9
Q ss_pred CchhccccccCCCCeEEEEcccCCCCCC-----------------cccccccccccCCCccceEeeeeccCcccCCCCce
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENAL-----------------TDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNER 63 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~~-----------------~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 63 (517)
|+++|.||++ +|++|||||+|+..... .++|.+...+ |.. ..++ .....
T Consensus 19 G~~~A~~L~~-~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~-~~~~------~~~~~ 84 (546)
T 1kdg_A 19 GIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESL------FTD-SNPF------WWCKD 84 (546)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGG------GTC-SCCT------TBCTT
T ss_pred HHHHHHHHHh-CCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHh------hcC-CCcc------ccccc
Confidence 6899999999 79999999999854310 1112111100 110 0000 00112
Q ss_pred eeccCCcccchhhhhcceeeecCChhhHHH---HHHhCCCCCCccchHHHHHhhccCCCCCCCCCCcccCCCceEeecCC
Q psy10349 64 CPWPAGRAVGGASVINNNIYTRGNPNDFDR---WLEAGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSP 140 (517)
Q Consensus 64 ~~~~~g~~lGGsS~~n~~~~~r~~~~df~~---w~~~g~~~W~~~~l~py~~~~e~~~~~~~~~~~~~g~~g~~~~~~~~ 140 (517)
..+++|++|||||++|+|+|+|+.+.||+. | +.+|+|++ |||+|+|+..+. ...++.+|+ .
T Consensus 85 ~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~----~~~~~~~g~------~ 148 (546)
T 1kdg_A 85 ITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPS----TDHPSTDGQ------R 148 (546)
T ss_dssp BSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCC----BSCCSTTSC------C
T ss_pred cccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCC----CccCCCCCC------c
Confidence 456899999999999999999999999987 8 56899988 999999986542 112334443 2
Q ss_pred CCChhHHHHHHHHHHcCCCCCCCC-C--CCCCcccccccccccCCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCC
Q psy10349 141 YKSKLMDAFLESAPEVGLNLTDYN-S--PDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPN 217 (517)
Q Consensus 141 ~~~~~~~~~~~a~~~~G~~~~d~~-~--~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~ 217 (517)
+..+....|.++++++|++..+.+ . .. +.|++.++.+|.+|.|+++..+||.++.+++|++|++++.|++|+++
T Consensus 149 ~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~-~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~-- 225 (546)
T 1kdg_A 149 YLEQSFNVVSQLLKGQGYNQATINDNPNYK-DHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRN-- 225 (546)
T ss_dssp CSCHHHHHHHHHHHTTTCEECCGGGSTTCC-TTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEE--
T ss_pred cCCHHHHHHHHHHHHCCCCcCCccCCcCCC-CcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEe--
Confidence 456777889999999999764322 1 13 56888888888999999999999999888899999999999999998
Q ss_pred CCeEEEEEEEe--CCe--EEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhC------CCCee-----eeCcccccc
Q psy10349 218 TKRVFGVEFMK--NNK--KRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQF------NIPVL-----ADLQVGENL 282 (517)
Q Consensus 218 ~~~a~gV~~~~--~g~--~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~------GI~~~-----~dlpVG~nl 282 (517)
+++++||++.. +|+ +.++++.|+||||||+++||+||++|||||+++|+++ ||+++ +|||||+||
T Consensus 226 ~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlpVG~nL 305 (546)
T 1kdg_A 226 GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMNA 305 (546)
T ss_dssp TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTB
T ss_pred CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCCcccCc
Confidence 56999999975 464 3456666899999999999999999999999999999 69885 899999999
Q ss_pred ccCcCCcceEEEEcccc-ccc-hhhhhhhHHHHHHHHh--ccCC-cccCCccceEEEEecCCCCCCCCCCCeeEEeeccc
Q psy10349 283 QEHPAFASLAFTVNQKV-GLV-SDRIFSNLAKETIKAF--TNQG-WTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPAS 357 (517)
Q Consensus 283 ~dH~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~--~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 357 (517)
|||+.+ .+.+. .+.. ... ..............+| .++| ++ ...... .|+....... ...+.++..+.+..
T Consensus 306 ~DH~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~ 380 (546)
T 1kdg_A 306 QDNPSI-NLVFT-HPSIDAYENWADVWSNPRPADAAQYLANQSGVFA-GASPKL-NFWRAYSGSD-GFTRYAQGTVRPGA 380 (546)
T ss_dssp BCCCCE-EEEEE-CTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGG-SCSCCE-EEEEEEECTT-SCEEEEEEEEEESC
T ss_pred ccCcce-eEEEe-cCCcccccchhhhhcchhHHHHHHHHHcCCcccc-cCCcce-EEEEccCCCC-cchhhhhheecccc
Confidence 999986 56665 2222 111 0000001001234455 5677 55 222222 3443211100 00112332222110
Q ss_pred chhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEEEeeecccc-CceeEEEccCCCCCCCceEecCCCCChhhHHHHH
Q psy10349 358 LAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYP-ESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIV 436 (517)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~ 436 (517)
... .+ ..+......+++...+++| .|||+|+|+|+| ..|.|+++|+.+|.|++.++
T Consensus 381 ~~~------------~~---------~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~ 437 (546)
T 1kdg_A 381 ASV------------NS---------SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLL 437 (546)
T ss_dssp SCC------------CC---------SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHH
T ss_pred ccc------------cc---------ccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHH
Confidence 000 00 0011112467777778888 999999999987 56789999999999999999
Q ss_pred HHHHHHHHHhcCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeecc
Q psy10349 437 EGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516 (517)
Q Consensus 437 ~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv 516 (517)
++++.+++++++.+.. . ...|++ ..+++++.++++....+.+|++||||||+++ .+||||++|||||+
T Consensus 438 ~~~~~~~~~~~~~~~~----~---~~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~-~~~VVD~~lrV~Gv 505 (546)
T 1kdg_A 438 QALHDVVSNIGSIPGL----T---MITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSP-QSAVVDSNVKVFGT 505 (546)
T ss_dssp HHHHHHTTTGGGSTTC----E---EEESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCT-TTCSBCTTCBBTTC
T ss_pred HHHHHHHHHhcCCCcc----c---ccCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCC-CCeeECCCCeEccC
Confidence 9999999998775321 1 123442 2478888899998888999999999999753 47999999999998
Q ss_pred C
Q psy10349 517 K 517 (517)
Q Consensus 517 ~ 517 (517)
+
T Consensus 506 ~ 506 (546)
T 1kdg_A 506 N 506 (546)
T ss_dssp S
T ss_pred C
Confidence 5
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=1.3e-56 Score=477.26 Aligned_cols=404 Identities=18% Similarity=0.206 Sum_probs=287.0
Q ss_pred CchhccccccCCCCeEEEEcccCCCCC-C--cccccccccccCCCccceEeeeecc--------------CcccC----C
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENA-L--TDIPETAHYLQFTKFNWNFTTEFQP--------------GACRG----L 59 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~-~--~~~p~~~~~~~~~~~~w~~~~~~~~--------------~~~~~----~ 59 (517)
|+++|.+|++ +|++|+|||+|+.... . .+.+... ......++|.|.++|+. ..+.+ .
T Consensus 17 g~~~a~~l~~-~~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~~~~~~g~~~~~ 94 (504)
T 1n4w_A 17 AAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVNRNIDPYAGVLDRV 94 (504)
T ss_dssp HHHHHHHHHH-TTCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGCCBCCCCBCSEEEE
T ss_pred HHHHHHHHHh-CCCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccccccccccccccee
Confidence 6789999999 8999999999985431 1 1222211 11233578999988762 01111 1
Q ss_pred CCceeeccCCcccchhhhhcceeeecCChhhHHHHHHhCCCCCCccchH-HHHHhhccCCCCCCCCCCcccCCCceEeec
Q psy10349 60 NNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVL-PYFKKSEDIDVPELKRSEYHGVGGYLNVDY 138 (517)
Q Consensus 60 ~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~-py~~~~e~~~~~~~~~~~~~g~~g~~~~~~ 138 (517)
.++.+.|+|||+|||||+||+|+|+|+.+.|||.|. ++|.|++|+ |||+|+|+++++...+...| ..+|
T Consensus 95 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~-~~~~----- 164 (504)
T 1n4w_A 95 NYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHIDTKWF-EDTE----- 164 (504)
T ss_dssp ECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCCHHHH-HHCG-----
T ss_pred cCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCCcccc-cCCC-----
Confidence 567889999999999999999999999999999994 689999999 99999999876531111111 0011
Q ss_pred CCCCChhHHHHHHHHHHcCC-----CC-CCCCC--------CCCCcccccccccccCCcccchhhhhhcccCCCCCeEEE
Q psy10349 139 SPYKSKLMDAFLESAPEVGL-----NL-TDYNS--------PDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVM 204 (517)
Q Consensus 139 ~~~~~~~~~~~~~a~~~~G~-----~~-~d~~~--------~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i~ 204 (517)
..+..+.|.++++++|+ +. .|+|. ...|..++.|..+|.+| |+++..+||.++.+++|++|+
T Consensus 165 ---~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~ 240 (504)
T 1n4w_A 165 ---WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQ 240 (504)
T ss_dssp ---GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEE
T ss_pred ---cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEE
Confidence 24678899999999999 44 34432 11267788888899999 999999999888888999999
Q ss_pred cCcEEEEEEecCCCCeEEEEEEEe-CC---eEEEEEecceEEEecCCcCcHHHHHHcC-CCChhhhhhCCCCeeeeCccc
Q psy10349 205 KKARVLKVLIDPNTKRVFGVEFMK-NN---KKRVVYAKKEVVLSAGAFFSPHLLLLSG-IGPREQLEQFNIPVLADLQVG 279 (517)
Q Consensus 205 ~~~~V~ri~~~~~~~~a~gV~~~~-~g---~~~~v~a~keVIlaaGai~tp~lLl~SG-IGp~~~L~~~GI~~~~dlpVG 279 (517)
+++.|+||++++++++++||++.. +| +..+++|+ +||||||+|+||+|||+|| || ||+++.| .||
T Consensus 241 ~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~~~-~VG 310 (504)
T 1n4w_A 241 TLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG--------TLPNLNS-EVG 310 (504)
T ss_dssp ESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT--------SSTTCCT-TTT
T ss_pred eCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC--------CCCCCCh-hhc
Confidence 999999999985445899999984 66 67889995 9999999999999999999 98 7887755 499
Q ss_pred cccccCcCCcceEEEEccccccchhhhhhhHHHHHHHHhccCC-cccCCccceEEEEecCCCCCCCCCCCeeEEeecccc
Q psy10349 280 ENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQG-WTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASL 358 (517)
Q Consensus 280 ~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 358 (517)
+|||||+.+ .+.+.... .. ..| +. +.....+|...... ..|++++.+ . .
T Consensus 311 ~nl~dh~~~-~~~~~~~~-~~-------------------~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~-~--~ 360 (504)
T 1n4w_A 311 AGWGPNGNI-MTARANHM-WN-------------------PTGAHQ--SSIPALGIDAWDNS----DSSVFAEIA-P--M 360 (504)
T ss_dssp CCBBCTTCE-EEEEECCT-TC-------------------CCCSCC--CSSCCEEEEECCSS----TTCEEEEEE-C--C
T ss_pred cccccCCcc-eeeeccCC-CC-------------------cccCcC--CCccEEEEeccCCC----CCceEEEec-c--C
Confidence 999999975 44332111 00 011 11 11222345443311 124443322 0 0
Q ss_pred hhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEEEeeeccccCceeEEEccCCCCCCCceEecCCCCChhhHHHHHHH
Q psy10349 359 AIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEG 438 (517)
Q Consensus 359 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~~ 438 (517)
+. .+ ...+.+...+++|.|||+|+|+|+|| .|+++|+.++ | +.++++
T Consensus 361 ~~-------------------------~~--~~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~ 407 (504)
T 1n4w_A 361 PA-------------------------GL--ETWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNA 407 (504)
T ss_dssp CC-------------------------SS--CCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHH
T ss_pred Ch-------------------------HH--HhhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHH
Confidence 00 00 02355566678999999999999775 7999999999 9 789999
Q ss_pred HH-HHHHHhcCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 439 IK-MVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 439 ~~-~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
++ .+++|+++.+. +++.+. . .++ ++++ ...+.+|++|||||| +|||++|||||++
T Consensus 408 ~~~~~~~i~~~~~~-----------~~~~~~--~-~~~-~~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~ 463 (504)
T 1n4w_A 408 AKALFDRINKANGT-----------IYRYDL--F-GTQ-LKAF---ADDFCYHPLGGCVLG------KATDDYGRVAGYK 463 (504)
T ss_dssp HHHHHHHHHHHHTC-----------CBCCSS--S-SSS-CCSE---ECSEESSCBCSSCTT------TTBCTTSBBTTCS
T ss_pred HHHHHHHHHhccCC-----------CcCCch--h-hhh-hhhh---ccCccccccCCceee------eEECCCCeEeccC
Confidence 98 88888876442 111110 0 000 1111 456789999999999 7999999999985
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=7.5e-55 Score=463.82 Aligned_cols=402 Identities=17% Similarity=0.168 Sum_probs=280.9
Q ss_pred CchhccccccCCCCeEEEEcccCCCCCCccccc---ccccc-cCCCccceEeeeeccCc-----------ccCC------
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPE---TAHYL-QFTKFNWNFTTEFQPGA-----------CRGL------ 59 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~~~~~~-----------~~~~------ 59 (517)
|+++|.+|++ ++.+|+|||+|+.... ..|. +.... ....++|.|.++||... ....
T Consensus 23 g~~~a~~l~~-~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~~~~~~~~~g~~~~~ 99 (507)
T 1coy_A 23 GAVAALRLTQ-AGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGINKSIDRYVGVLDSE 99 (507)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSCCCBCCCCBCSEEEE
T ss_pred HHHHHHHHHH-CCCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccccccccccccceeeEe
Confidence 6889999999 8999999999986431 2332 21112 23458999999887210 1123
Q ss_pred CCceeeccCCcccchhhhhcceeeecCChhhHHHHHHhCCCCCCccchH-HHHHhhccCCCCCCCCCCcccCCCceEeec
Q psy10349 60 NNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVL-PYFKKSEDIDVPELKRSEYHGVGGYLNVDY 138 (517)
Q Consensus 60 ~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~-py~~~~e~~~~~~~~~~~~~g~~g~~~~~~ 138 (517)
.++.+.|+|||+|||||+||+|+|+|+.+.|||.|. ++|.|++|+ |||+|+|++++++. ..+.. .
T Consensus 100 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~-------~~~~~---~ 165 (507)
T 1coy_A 100 RFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNN-------IDQAW---F 165 (507)
T ss_dssp ECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBC-------CCHHH---H
T ss_pred cCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCC-------CCCcc---c
Confidence 567889999999999999999999999999999994 589999999 99999999876531 00100 0
Q ss_pred CCC-CChhHHHHHHHHHHcCC-----CC-CCCCC--------CCCCcccccccccccCCcccchhhhhhcccCCCCCeEE
Q psy10349 139 SPY-KSKLMDAFLESAPEVGL-----NL-TDYNS--------PDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHV 203 (517)
Q Consensus 139 ~~~-~~~~~~~~~~a~~~~G~-----~~-~d~~~--------~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i 203 (517)
+.. ..+..+.|.++++++|+ +. .|+|. ...|..|+.|..+|.+| |+++..+||.++.+++|++|
T Consensus 166 ~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~i 244 (507)
T 1coy_A 166 ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLTI 244 (507)
T ss_dssp HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEEE
T ss_pred cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCCcEE
Confidence 111 25678899999999999 54 34432 11266788888899999 99999999999888899999
Q ss_pred EcCcEEEEEEecCCCCeEEEEEEEe-CC---eEEEEEecceEEEecCCcCcHHHHHHcC-CCChhhhhhCCCCeeeeCcc
Q psy10349 204 MKKARVLKVLIDPNTKRVFGVEFMK-NN---KKRVVYAKKEVVLSAGAFFSPHLLLLSG-IGPREQLEQFNIPVLADLQV 278 (517)
Q Consensus 204 ~~~~~V~ri~~~~~~~~a~gV~~~~-~g---~~~~v~a~keVIlaaGai~tp~lLl~SG-IGp~~~L~~~GI~~~~dlpV 278 (517)
++++.|+||++++++++++||++.. +| +.++++|+ +||||||+|+||+|||+|| || +||+..| .|
T Consensus 245 ~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG--------~lpnl~d-~V 314 (507)
T 1coy_A 245 TTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKAQG--------HLPNLSS-QV 314 (507)
T ss_dssp ECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT--------SSTTSCT-TT
T ss_pred EeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhcccCC--------CCCccCh-hh
Confidence 9999999999985334899999986 56 47889995 9999999999999999999 98 3564433 39
Q ss_pred ccccccCcCCcceEEEEccccccchhhhhhhHHHHHHHHhccCC-cccCCccceEEEEecCCCCCCCCCCCeeEEeeccc
Q psy10349 279 GENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQG-WTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPAS 357 (517)
Q Consensus 279 G~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 357 (517)
|+||+||+.. ........ |...| +. +.....++..... ...|++++.. +
T Consensus 315 G~~l~~h~~~-~~~~~~~~--------------------~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~-~-- 364 (507)
T 1coy_A 315 GEGWGNNGNI-MVGRANHM--------------------WDATGSKQ--ATIPTMGIDNWAD----PTAPIFAEIA-P-- 364 (507)
T ss_dssp TCCBBCTTEE-EEEEECCT--------------------TSCCCSCC--CSSCCEEEECTTC----TTSCEEEEEE-C--
T ss_pred CCccccCCcc-cccccccc--------------------cccccccC--CCcceEEEeccCC----CCCCcEEEec-c--
Confidence 9999999864 22211000 00112 11 0111112222111 1124433321 1
Q ss_pred chhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEEEeeeccccCceeEEEccCCCCCCCceEecCCCCChhhHHHHHH
Q psy10349 358 LAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVE 437 (517)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~ 437 (517)
.+. .+ ...+.++..+++|.|||+|+|+++|| .|+++|+.++ | +.+++
T Consensus 365 ~~~-------------------------~~--~~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~ 411 (507)
T 1coy_A 365 LPA-------------------------GL--ETYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGID 411 (507)
T ss_dssp CCC-------------------------SS--CCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHH
T ss_pred CCH-------------------------HH--hhheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHH
Confidence 000 00 12344555668899999999998766 8999999999 9 56777
Q ss_pred HHH-HHHHHhcCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeecc
Q psy10349 438 GIK-MVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516 (517)
Q Consensus 438 ~~~-~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv 516 (517)
+++ .+++++++.+. + +. .+. ..+++ ++| ...+.+|++|||||| +|||++|||||+
T Consensus 412 ~~~~~~~~i~~~~~~--~----~~--~~~-----~~~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv 467 (507)
T 1coy_A 412 MAKKVFDKINQKEGT--I----YR--TDL-----FGVYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEY 467 (507)
T ss_dssp HHHHHHHHHHHHHTC--C----BC--SSC-----C--CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTS
T ss_pred HHHHHHHHHHhhcCC--c----cc--Ccc-----cccch--hhh---cccccccccCCcchh------heECCCCeEecc
Confidence 777 88899876431 1 10 010 11221 222 456789999999999 499999999998
Q ss_pred C
Q psy10349 517 K 517 (517)
Q Consensus 517 ~ 517 (517)
+
T Consensus 468 ~ 468 (507)
T 1coy_A 468 P 468 (507)
T ss_dssp T
T ss_pred C
Confidence 5
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.1e-35 Score=322.74 Aligned_cols=373 Identities=14% Similarity=0.102 Sum_probs=226.5
Q ss_pred CCcccchhhhhcceeeecCChhhHHHHHHhCCCCC---CccchHHHHHhhccCCCCCCCCCCcccCCCceEeecCCCCCh
Q psy10349 68 AGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGW---GYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSK 144 (517)
Q Consensus 68 ~g~~lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W---~~~~l~py~~~~e~~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 144 (517)
.+..+||.+.+|.+...|..+.+ .+.. ..+| .++++.++|++.|..+... + + .+..+
T Consensus 157 ~~~~vGG~~~~~~g~~~r~~~~e--~~~~--l~~~~v~~~~~l~~~~~~~~~l~~vg-------g--~-------~~~~~ 216 (623)
T 3pl8_A 157 VTRVVGGMSTAWTCATPRFDREQ--RPLL--VKDDADADDAEWDRLYTKAESYFQTG-------T--D-------QFKES 216 (623)
T ss_dssp ECCSTTGGGGTCCCBCCCCCGGG--SCCS--STTCHHHHHHHHHHHHHHHHHHHTEE-------S--C-------TTTTC
T ss_pred ccccccCcceeeccccccCChHH--hhhh--hcccCccChhhHHHHHHHHHHhcccc-------c--c-------cccCc
Confidence 46779999999999999988753 1100 2233 4677899999998875431 0 0 01111
Q ss_pred hH-HHHHHHHHHcCCCCCCCCCCCCCcccccccccccCCcccchhhhhhccc------CCCCCeEEEcCcEEEEEEecCC
Q psy10349 145 LM-DAFLESAPEVGLNLTDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPI------VERPNFHVMKKARVLKVLIDPN 217 (517)
Q Consensus 145 ~~-~~~~~a~~~~G~~~~d~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~------~~~~nl~i~~~~~V~ri~~~~~ 217 (517)
.. ......+.........+.. - ..... ..-....|+++..++|.++ ++++|++|++++.|++|+++++
T Consensus 217 ~~~~~~~~~l~~~~~~~~~~~~-~-p~a~~---~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~ 291 (623)
T 3pl8_A 217 IRHNLVLNKLTEEYKGQRDFQQ-I-PLAAT---RRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNAL 291 (623)
T ss_dssp HHHHHHHHHHHHHTTTTSCCEE-C-CEEEE---EEETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTT
T ss_pred cccccchHHHHHhhhhcccccc-c-chhhc---cCCCCccccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECC
Confidence 11 1111222221110000000 0 00000 0011345888889999887 6678999999999999999854
Q ss_pred CCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEE
Q psy10349 218 TKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFT 294 (517)
Q Consensus 218 ~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~ 294 (517)
+++++||++.+ +|+..++.| ++||||+|++.||+||++|||||+.+|+.+||++ ||| ||+|||||+.+ .+.+.
T Consensus 292 ~~~v~GV~~~~~~~g~~~~i~A-~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~-~~~~~ 367 (623)
T 3pl8_A 292 NSEIESLHIHDLISGDRFEIKA-DVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLV-FCQTV 367 (623)
T ss_dssp SSCEEEEEEEETTTCCEEEECE-EEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE-EEEEE
T ss_pred CCEEEEEEEEEcCCCcEEEEEC-CEEEEcCCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCc-eEEEE
Confidence 56999999986 688889999 5999999999999999999999999999999999 999 99999999986 77777
Q ss_pred Ecccccc-chhh----------hh----------h--hH-HHHHH-HHh-cc-CC-cccC-CccceEEEEecCCCCCCCC
Q psy10349 295 VNQKVGL-VSDR----------IF----------S--NL-AKETI-KAF-TN-QG-WTTT-LGCEGLGYVRTKYNNYPPG 345 (517)
Q Consensus 295 ~~~~~~~-~~~~----------~~----------~--~~-~~~~~-~~~-~~-~G-~~~~-~~~~~~~~~~~~~~~~~~~ 345 (517)
+++.... ..++ .+ . .+ ....+ ..| +. .+ +... ...+-..+.+.. ..
T Consensus 368 ~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 442 (623)
T 3pl8_A 368 MSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQ-----PS 442 (623)
T ss_dssp ECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCB-----TT
T ss_pred ECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhccccccccccccccccccccccc-----cc
Confidence 7643100 0000 00 0 00 00111 111 11 11 1100 000000000000 00
Q ss_pred CCCeeEEeecccchhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEE-EeeeccccCceeEEEccC--CCCCCCceEe
Q psy10349 346 VPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWS-IWPMLMYPESRGYVRLKS--ADPMVYPAVQ 422 (517)
Q Consensus 346 ~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~srG~V~L~s--~dp~~~P~i~ 422 (517)
+| ++..+....+.. ..+++. +...-.+. .+..++.|.++|+|+|++ +|++++|+++
T Consensus 443 ~~-~~~~~~~~~~~~--~~~~~~------------------~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~ 501 (623)
T 3pl8_A 443 HP-WHTQIHRDAFSY--GAVQQS------------------IDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPT 501 (623)
T ss_dssp BC-EEEEEECCSCCC--SCCCCS------------------SCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEE
T ss_pred Cc-chhhhhhhhccc--cccccc------------------cccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEE
Confidence 11 111000000000 000000 00001222 234678999999999987 8999999999
Q ss_pred cCCCCChh-hHHHHHHHHHHHHHHhcCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCC
Q psy10349 423 SNFFQDPL-DLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDG 501 (517)
Q Consensus 423 ~~y~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~ 501 (517)
++|..++. |++++.++++.+++++++.. .... .+. +.+ ....+++|++||||||+++
T Consensus 502 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~g-----~~~~---~~~---------~~~-----~~~~~~~H~~gt~~mg~~~ 559 (623)
T 3pl8_A 502 FDFRFPAGRTSKEAEDMMTDMCVMSAKIG-----GFLP---GSL---------PQF-----MEPGLVLHLGGTHRMGFDE 559 (623)
T ss_dssp EECCCCTTHHHHHHHHHHHHHHHHHTTTE-----EECT---TSC---------SEE-----CCTTTTCCCBCTTCBCSST
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHHHhcC-----Cccc---Cch---------hhc-----cCCCCcccCCCceeCCCCC
Confidence 99999999 99999999999999998632 2110 000 000 0135689999999999863
Q ss_pred CCCCcc-CCCCeeeccC
Q psy10349 502 DRTAVV-DPRLRVHGIK 517 (517)
Q Consensus 502 d~~~VV-D~~lrV~Gv~ 517 (517)
+.+||| |++|||||++
T Consensus 560 ~~~~vvvd~~~~~~~~~ 576 (623)
T 3pl8_A 560 KEDNCCVNTDSRVFGFK 576 (623)
T ss_dssp TTTTCSBCTTCBBTTCS
T ss_pred CCCeeEECCCCCEecCC
Confidence 347997 9999999985
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.75 E-value=8.8e-08 Score=101.44 Aligned_cols=65 Identities=26% Similarity=0.331 Sum_probs=52.0
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcC-cHHHHHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFF-SPHLLLL 256 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~-tp~lLl~ 256 (517)
.|....++.|++|++++.|++|+.++ +++++||++..+++..+|+|+|.||||+|++. ++.+|..
T Consensus 207 ~L~~~~~~~Gv~i~~~t~v~~L~~~~-~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 207 PLVETAEKLGVRAEYDMRVQTLVTDD-TGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECT-TCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCEEEecCEeEEEEECC-CCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 33333344589999999999999874 36899999988888889999768999999998 6666543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.15 E-value=8.1e-06 Score=87.44 Aligned_cols=60 Identities=22% Similarity=0.308 Sum_probs=47.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCcHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
.|.....+.+++|++++.|++|+.++ +++++||++.. +|+..+++| |.||||+|.+...+
T Consensus 255 ~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 255 TLRKAAKEQGIDTRLNSRVVKLVVND-DHSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEECT-TSBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTCH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEECC-CCcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccCH
Confidence 33333345689999999999999873 16899999985 788888999 67999999987643
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.00 E-value=3e-05 Score=83.08 Aligned_cols=62 Identities=23% Similarity=0.224 Sum_probs=48.2
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCc-HHHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFS-PHLL 254 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~t-p~lL 254 (517)
.|.....+.+++|++++.|++|+.++ +++++||.+.. +|+..+++|+ .||||+|.+.. +.++
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKAD-AVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHH
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCHHHH
Confidence 34333345689999999999999873 26899999986 7888889995 59999999865 4443
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.83 E-value=7.2e-05 Score=80.08 Aligned_cols=64 Identities=23% Similarity=0.272 Sum_probs=48.8
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcC-cHHHHHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFF-SPHLLLL 256 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~-tp~lLl~ 256 (517)
.|....++.+++|++++.|++|+.++ +++++||++.. +|+..+++| +.||||+|.+. .+.+|..
T Consensus 260 ~L~~~~~~~gv~i~~~t~v~~l~~~~-~g~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 260 VLWDNAVKRGTDIRLNSRVVRILEDA-SGKVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCeEEecCEEEEEEECC-CCeEEEEEEEeCCCcEEEEEc-CEEEEeCCCCccCHHHHHH
Confidence 33333345689999999999998873 16899999985 788888999 67999999887 4555543
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.49 E-value=0.00095 Score=71.86 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=44.4
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCc
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~t 250 (517)
..+.|++|+.++.|++|+.+ +++++||.+.. +|+..+++| +.||||+|.+..
T Consensus 165 ~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 218 (621)
T 2h88_A 165 SLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRA-KNTVIATGGYGR 218 (621)
T ss_dssp HTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEc-CeEEECCCcccc
Confidence 34679999999999999987 47999999874 788888999 579999999874
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.40 E-value=0.00067 Score=73.59 Aligned_cols=51 Identities=8% Similarity=0.212 Sum_probs=43.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~t 250 (517)
.+.|++|+.++.|++|+.+ +++++||.+.. +|+..+++| +.||||+|.+..
T Consensus 169 ~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 221 (660)
T 2bs2_A 169 LKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVA-KGTLIATGGYGR 221 (660)
T ss_dssp HHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEC-SEEEECCCCCGG
T ss_pred HhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEc-CEEEEccCcchh
Confidence 3458999999999999986 46999998873 677788999 579999999873
No 18
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.38 E-value=9.5e-05 Score=73.87 Aligned_cols=60 Identities=17% Similarity=0.272 Sum_probs=44.0
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHc-CCC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLS-GIG 260 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~S-GIG 260 (517)
+++.+++|++++.|++|..+++ .+..|+. .+|+..+++|+ .||+|+|+. |++|+... |+.
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~~~~--~~~~v~~-~~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 160 AESDGAQLVFHTPLIAGRVRPE--GGFELDF-GGAEPMTLSCR-VLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHHTTCEEECSCCEEEEEECTT--SSEEEEE-CTTSCEEEEEE-EEEECCGGG-HHHHHHTEETSC
T ss_pred HHHCCCEEECCCEEEEEEEcCC--ceEEEEE-CCCceeEEEeC-EEEECCCcc-hHHHHHHhcCCC
Confidence 3456899999999999998742 2233533 35655678894 699999986 88888777 764
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.26 E-value=0.0011 Score=70.96 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=42.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~t 250 (517)
.+.|++|+.++.|++|+.++ +++++||.+.. +|+..+++| +.||||+|.+..
T Consensus 154 ~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGg~~~ 207 (588)
T 2wdq_A 154 LKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKA-RATVLATGGAGR 207 (588)
T ss_dssp HHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEc-CEEEECCCCCcc
Confidence 34589999999999999863 36899999874 677788999 579999999764
No 20
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.17 E-value=0.00096 Score=70.76 Aligned_cols=52 Identities=23% Similarity=0.427 Sum_probs=42.9
Q ss_pred CCCeEEEcCcEEEEEEecCCC-----CeEEEEEEEe--CCeEEEEEecceEEEecCCcCc
Q psy10349 198 RPNFHVMKKARVLKVLIDPNT-----KRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~-----~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~t 250 (517)
++|++|+.++.|++|+.++++ +++.||.+.. +|+..+++| |.||||+|.+..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHA-KAVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEEC-SEEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCccc
Confidence 479999999999999984322 2899999885 788888999 579999998764
No 21
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.09 E-value=0.0016 Score=65.12 Aligned_cols=54 Identities=20% Similarity=0.217 Sum_probs=38.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++.+++|++++.|++|..+. ++ .+|+. ++. +++|+ .||+|+|+. |++|+...|+
T Consensus 165 ~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t--~~g--~i~a~-~VV~A~G~~-s~~l~~~~g~ 218 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRRVD--GA-WEVRC--DAG--SYRAA-VLVNAAGAW-CDAIAGLAGV 218 (381)
T ss_dssp HHTTCEEESSCCCCEEEEET--TE-EEEEC--SSE--EEEES-EEEECCGGG-HHHHHHHHTC
T ss_pred HHCCCEEEcCCEEEEEEEeC--Ce-EEEEe--CCC--EEEcC-EEEECCChh-HHHHHHHhCC
Confidence 45589999999999998873 33 34432 222 68885 699999974 7777776654
No 22
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.08 E-value=0.00075 Score=67.90 Aligned_cols=56 Identities=18% Similarity=0.280 Sum_probs=42.1
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
.++.+++|+.++.|++|..+ +++++||+.. +| +++|+ .||+|+|+. |+.|+...|+
T Consensus 159 ~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~-~g---~i~a~-~VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 159 AKEYGAKLLEYTEVKGFLIE--NNEIKGVKTN-KG---IIKTG-IVVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHTTCEEECSCCEEEEEES--SSBEEEEEET-TE---EEECS-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHCCCEEECCceEEEEEEE--CCEEEEEEEC-Cc---EEECC-EEEECcchh-HHHHHHHcCC
Confidence 34568999999999999887 4578777652 33 58885 699999976 6677766654
No 23
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.82 E-value=0.0017 Score=65.62 Aligned_cols=56 Identities=20% Similarity=0.322 Sum_probs=41.3
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
.++.+++|+.++.|++|..+ ++++.+|+.. +| +++| +.||+|+|+. ++.|+...|+
T Consensus 184 ~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~-~g---~~~a-~~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 184 ANEMGVDIIQNCEVTGFIKD--GEKVTGVKTT-RG---TIHA-GKVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHTTCEEECSCCEEEEEES--SSBEEEEEET-TC---CEEE-EEEEECCGGG-HHHHHHHHTC
T ss_pred HHHCCCEEEcCCeEEEEEEe--CCEEEEEEeC-Cc---eEEC-CEEEECCchh-HHHHHHHcCC
Confidence 34568999999999999887 4567777653 34 5778 5699999975 5567666554
No 24
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.76 E-value=0.0021 Score=71.83 Aligned_cols=55 Identities=24% Similarity=0.261 Sum_probs=42.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
.+.+++|+.++.|++|..+ ++++++|+.. +| +++| +.||+|+|+. |+.|+...|+
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~-~G---~i~A-d~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQS--GGRVTGVQTA-DG---VIPA-DIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHTTCEEECSCCEEEEEEE--TTEEEEEEET-TE---EEEC-SEEEECCGGG-HHHHHHTTTC
T ss_pred HHcCCEEECCceEEEEEEe--CCEEEEEEEC-Cc---EEEC-CEEEECCccc-hHHHHHHhCC
Confidence 4568999999999999886 4577777642 33 5888 4699999985 6777776665
No 25
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.66 E-value=0.0078 Score=60.76 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=36.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSG 258 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SG 258 (517)
.+.+++|++++.|++|..+. +.+ .+..++. +++|+ .||+|+|+. ++.|+...|
T Consensus 164 ~~~Gv~i~~~~~V~~i~~~~--~~v---~v~t~~g--~i~a~-~VV~A~G~~-s~~l~~~~g 216 (397)
T 2oln_A 164 QAAGATLRAGETVTELVPDA--DGV---SVTTDRG--TYRAG-KVVLACGPY-TNDLLEPLG 216 (397)
T ss_dssp HHTTCEEEESCCEEEEEEET--TEE---EEEESSC--EEEEE-EEEECCGGG-HHHHHGGGT
T ss_pred HHcCCEEECCCEEEEEEEcC--CeE---EEEECCC--EEEcC-EEEEcCCcC-hHHHhhhcC
Confidence 34589999999999998763 333 3333332 57884 699999984 566655444
No 26
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.60 E-value=0.0033 Score=68.59 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=36.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLS 257 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~S 257 (517)
++.+++|++++.|++|..++ +++ +|+.. +|. +++| +.||+|+|+. ++.|+...
T Consensus 428 ~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~-~G~--~i~A-d~VVlAtG~~-s~~l~~~~ 480 (676)
T 3ps9_A 428 QQQGLQIYYQYQLQNFSRKD--DCW-LLNFA-GDQ--QATH-SVVVLANGHQ-ISRFSQTS 480 (676)
T ss_dssp HHTTCEEEESCCEEEEEEET--TEE-EEEET-TSC--EEEE-SEEEECCGGG-GGCSTTTT
T ss_pred HhCCCEEEeCCeeeEEEEeC--CeE-EEEEC-CCC--EEEC-CEEEECCCcc-hhcccccc
Confidence 45689999999999999873 442 34332 444 3788 4699999986 66655443
No 27
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.60 E-value=0.0059 Score=66.08 Aligned_cols=50 Identities=24% Similarity=0.282 Sum_probs=41.1
Q ss_pred Ce-EEEcCcEEEEEEecCC-CCeEEEEEEE--eCCeEEEEEecceEEEecCCcCc
Q psy10349 200 NF-HVMKKARVLKVLIDPN-TKRVFGVEFM--KNNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 200 nl-~i~~~~~V~ri~~~~~-~~~a~gV~~~--~~g~~~~v~a~keVIlaaGai~t 250 (517)
|+ +|+.++.|++|+.+++ .++++||.+. .+|+..+++| |.||||+|.+..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 89 9999999999998731 0289999875 3677778999 679999999875
No 28
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.58 E-value=0.0081 Score=60.27 Aligned_cols=52 Identities=27% Similarity=0.356 Sum_probs=35.5
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLL 256 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~ 256 (517)
+++.+++|+.++.|++|..++ +. |.+..++. +++| +.||+|+|+. ++.|+-.
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~~~--~~---~~v~~~~g--~~~a-~~vV~A~G~~-~~~l~~~ 211 (389)
T 2gf3_A 160 AEARGAKVLTHTRVEDFDISP--DS---VKIETANG--SYTA-DKLIVSMGAW-NSKLLSK 211 (389)
T ss_dssp HHHTTCEEECSCCEEEEEECS--SC---EEEEETTE--EEEE-EEEEECCGGG-HHHHGGG
T ss_pred HHHCCCEEEcCcEEEEEEecC--Ce---EEEEeCCC--EEEe-CEEEEecCcc-HHHHhhh
Confidence 345589999999999998763 22 22333333 5788 5799999984 5555443
No 29
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.54 E-value=0.0033 Score=68.17 Aligned_cols=49 Identities=20% Similarity=0.386 Sum_probs=41.2
Q ss_pred CeEEEcCcEEEEEEecCC-CCeEEEEEEEe--CCeEEEEEecceEEEecCCcC
Q psy10349 200 NFHVMKKARVLKVLIDPN-TKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~-~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~ 249 (517)
|++|+.++.|++|+.+++ .++++||.+.. +|+...++| |.||||+|.+.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~A-k~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKA-NAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEe-CEEEECCCccc
Confidence 899999999999998742 14999998764 678888999 57999999877
No 30
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.08 E-value=0.0097 Score=65.00 Aligned_cols=54 Identities=9% Similarity=0.077 Sum_probs=36.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLS 257 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~S 257 (517)
.+.+++|++++.|++|..++ +++ .|+.. +|. .+++| +.||+|+|+. ++.|+...
T Consensus 423 ~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~-~G~-~~i~A-d~VVlAtG~~-s~~l~~~~ 476 (689)
T 3pvc_A 423 QQNGMTCHYQHELQRLKRID--SQW-QLTFG-QSQ-AAKHH-ATVILATGHR-LPEWEQTH 476 (689)
T ss_dssp HHTTCEEEESCCEEEEEECS--SSE-EEEEC--CC-CCEEE-SEEEECCGGG-TTCSTTTT
T ss_pred HhCCCEEEeCCeEeEEEEeC--CeE-EEEeC-CCc-EEEEC-CEEEECCCcc-hhcccccc
Confidence 45689999999999999874 332 34332 332 14778 4699999987 66665443
No 31
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.64 E-value=0.06 Score=53.46 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=33.9
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
..+.+++|+.++.|++|..++ +.+ .|+. .+| +++| +.||+|+|+. |+.|+
T Consensus 159 ~~~~G~~i~~~~~V~~i~~~~--~~~-~v~~-~~g---~~~a-~~vV~a~G~~-s~~l~ 208 (372)
T 2uzz_A 159 AKEAGCAQLFNCPVTAIRHDD--DGV-TIET-ADG---EYQA-KKAIVCAGTW-VKDLL 208 (372)
T ss_dssp HHHTTCEEECSCCEEEEEECS--SSE-EEEE-SSC---EEEE-EEEEECCGGG-GGGTS
T ss_pred HHHCCCEEEcCCEEEEEEEcC--CEE-EEEE-CCC---eEEc-CEEEEcCCcc-HHhhc
Confidence 345689999999999998763 332 2322 234 3788 5699999975 55543
No 32
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=94.49 E-value=0.069 Score=55.37 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=36.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~ 249 (517)
++.|++|+.++.| +|+.+ ++++.||.+...+. .+++ +.||||+|+..
T Consensus 130 ~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g--~~~a-~~VVlAtGg~~ 176 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGL--VEDV-DKLVLATGGYS 176 (472)
T ss_dssp HHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEE--ECCC-SEEEECCCCCG
T ss_pred HhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCC--eEEe-eeEEECCCCCc
Confidence 5679999999999 99887 46899998753222 3557 57999999865
No 33
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.02 E-value=0.088 Score=55.96 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=48.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
.+.+++|++++.|++|..+ ++++.+|++.+ +++..+++| +.||+|+|+. +..|+...|+
T Consensus 199 ~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 199 AEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKA-KLVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEB-SCEEECCGGG-HHHHHTTCCS
T ss_pred HHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEc-CEEEECCChh-HHHHHHhhcc
Confidence 4568999999999999987 46899999875 577678999 5699999987 7888776654
No 34
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=93.95 E-value=0.12 Score=54.83 Aligned_cols=60 Identities=22% Similarity=0.248 Sum_probs=50.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
.+.+++|++++.|++|..+ ++++.||++.+ +|+..+++| +.||+|+|+. +.+|+...|+.
T Consensus 181 ~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 181 VARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYA-KKVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEE-EEEEECCGGG-HHHHHHTTTCC
T ss_pred HHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEEC-CEEEECCCcc-hHHHHHhcCCC
Confidence 4568999999999999987 56899999986 677788999 5799999975 78888877765
No 35
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.64 E-value=0.11 Score=55.74 Aligned_cols=58 Identities=21% Similarity=0.293 Sum_probs=45.8
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEE--eCCeEEEEEecceEEEecCCcCcH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFM--KNNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~--~~g~~~~v~a~keVIlaaGai~tp 251 (517)
++..+.+.+|++|+.++.|++|+.+ +++++||.+. .+|+..+++|+ .||||+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 3333445566999999999999987 4689999876 36887889995 699999997654
No 36
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=90.78 E-value=0.12 Score=53.66 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=36.4
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLL 256 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~ 256 (517)
+++.+.+|++++.|++|+.+ +++++||+.. +|+ ++.| +.||++|+...|.+.|+-
T Consensus 231 ~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~-~g~--~~~a-d~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 231 FQDLGGEVVLNARVSHMETT--GNKIEAVHLE-DGR--RFLT-QAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHTTCEEECSCCEEEEEEE--TTEEEEEEET-TSC--EEEC-SCEEECCC----------
T ss_pred HHHhCCceeeecceeEEEee--CCeEEEEEec-CCc--EEEc-CEEEECCCHHHHHHHhcc
Confidence 34568999999999999998 6799999875 454 3667 469999999888877663
No 37
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.32 E-value=0.12 Score=52.73 Aligned_cols=52 Identities=23% Similarity=0.359 Sum_probs=40.1
Q ss_pred CCCCCeEEEcCc---EEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 196 VERPNFHVMKKA---RVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 196 ~~~~nl~i~~~~---~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+++.+++|++++ .|++|..+ +++++||+.. +|+ +++|+ .||+|+|+. |++|+
T Consensus 171 a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~-~G~--~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 171 AQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTA-DGK--IWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEET-TTE--EEECS-EEEECCGGG-GGGTS
T ss_pred HHhcCCEEEeCCcCceEEEEEec--CCeEEEEEEC-CCC--EEECC-EEEECCCCC-hhhhc
Confidence 345689999999 99999987 5688888764 453 57884 699999986 55554
No 38
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=90.28 E-value=0.46 Score=45.33 Aligned_cols=51 Identities=27% Similarity=0.302 Sum_probs=39.5
Q ss_pred cCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--------C---CeEEEEEecceEEEecCCc
Q psy10349 195 IVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--------N---NKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 195 ~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--------~---g~~~~v~a~keVIlaaGai 248 (517)
+.++.+++|++++.|++|..+ ++++.||++.. + ++..+++| +.||+|+|+.
T Consensus 129 ~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~a-d~VV~AtG~~ 190 (284)
T 1rp0_A 129 LLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEA-KIVVSSCGHD 190 (284)
T ss_dssp HHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEE-EEEEECCCSS
T ss_pred HHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEEC-CEEEECCCCc
Confidence 334579999999999999887 46888998752 2 34567888 5799999963
No 39
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=89.83 E-value=0.18 Score=50.98 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=41.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
.+.+.+|++++.|++|..+ +++++||.. +|+ +++| +.||+|+++-.+++||-
T Consensus 207 ~~~G~~i~~~~~V~~i~~~--~~~~~gv~~--~g~--~~~a-d~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 207 SANGGKIHTGQEVSKILIE--NGKAAGIIA--DDR--IHDA-DLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHTTCEEECSCCEEEEEEE--TTEEEEEEE--TTE--EEEC-SEEEECSCHHHHHHHTT
T ss_pred HHcCCEEEECCceeEEEEE--CCEEEEEEE--CCE--EEEC-CEEEECCCHHHHHHhcC
Confidence 4457999999999999987 468888876 354 5778 57999999998888654
No 40
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=89.14 E-value=0.4 Score=47.69 Aligned_cols=57 Identities=25% Similarity=0.254 Sum_probs=44.2
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcC
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~ 249 (517)
.+|...+.+.+++|+.++.|++|..+ +++++||.+...+...+++| +.||.|.|+-.
T Consensus 106 ~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a-~~vV~A~G~~s 162 (397)
T 3cgv_A 106 KHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRA-KMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEE-EEEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEc-CEEEECCCcch
Confidence 34444334468999999999999887 56899999987677778999 57999998643
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=88.62 E-value=0.46 Score=48.58 Aligned_cols=51 Identities=14% Similarity=0.213 Sum_probs=40.1
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
+++.+++|++++.|++|..+ ++++.+|++. +|+ +++| +.||+|+|+...|.
T Consensus 144 ~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~-~G~--~i~A-d~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 144 LKDLGVKIRTNTPVETIEYE--NGQTKAVILQ-TGE--VLET-NHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHTTCEEECSCCEEEEEEE--TTEEEEEEET-TCC--EEEC-SCEEECCCCSSSGG
T ss_pred HHHCCCEEEeCcEEEEEEec--CCcEEEEEEC-CCC--EEEC-CEEEECCCCCcCCC
Confidence 34568999999999999886 4577788764 453 5788 56999999998774
No 42
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=88.47 E-value=0.51 Score=49.19 Aligned_cols=57 Identities=23% Similarity=0.320 Sum_probs=44.5
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcC
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~ 249 (517)
.+|...+.+.+++|+.++.|++|..+ ++++++|.+.. +|+..+++| +-||+|.|.-.
T Consensus 115 ~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~a-d~VI~AdG~~S 172 (512)
T 3e1t_A 115 DMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHA-RFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEE-EEEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEc-CEEEECCCcch
Confidence 34444344578999999999999987 56899999874 677678999 57999999743
No 43
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.36 E-value=0.28 Score=50.00 Aligned_cols=57 Identities=21% Similarity=0.316 Sum_probs=40.5
Q ss_pred CCCCCeEEEcCcEEEEEEecC-------------CCCeEEEEEEEeCCeEEEE--EecceEEEecCCcCcHHHHHHcC
Q psy10349 196 VERPNFHVMKKARVLKVLIDP-------------NTKRVFGVEFMKNNKKRVV--YAKKEVVLSAGAFFSPHLLLLSG 258 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~-------------~~~~a~gV~~~~~g~~~~v--~a~keVIlaaGai~tp~lLl~SG 258 (517)
+.+.+++|+.++.|++|..+. +++++.+|+. .+| ++ +| +.||+|+|+. |++|+...|
T Consensus 191 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t-~~g---~i~~~A-d~VV~AtG~~-s~~l~~~~g 262 (448)
T 3axb_A 191 ASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL-SDG---TRVEVG-EKLVVAAGVW-SNRLLNPLG 262 (448)
T ss_dssp HHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE-TTS---CEEEEE-EEEEECCGGG-HHHHHGGGT
T ss_pred HHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe-CCC---EEeecC-CEEEECCCcC-HHHHHHHcC
Confidence 345689999999999998720 1346667754 244 46 78 4699999986 777776554
No 44
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=88.15 E-value=0.57 Score=47.91 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=43.9
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCc
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~t 250 (517)
.|...+.+.+++|+.++.|++|..+ +++++||++.. +|+..+++| +-||.|.|+-..
T Consensus 105 ~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~a-d~VV~AdG~~s~ 163 (453)
T 3atr_A 105 RVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYS-KVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEEC-SEEEECCGGGCT
T ss_pred HHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEc-CEEEECcCCchh
Confidence 3433333468999999999999887 46899998875 677778999 579999997543
No 45
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=86.74 E-value=0.69 Score=48.08 Aligned_cols=54 Identities=19% Similarity=0.195 Sum_probs=43.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
.+.+++|+.++.|++|..+ + ++.+|++.+ +|+..+++| +.||+|+|+. +..|+.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A-~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQA-RGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEE-SCEEECCGGG-HHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEEC-CEEEECCChh-HHHHHH
Confidence 3458999999999999886 3 577888864 677778999 4699999986 677765
No 46
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.15 E-value=2.1 Score=40.84 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=49.8
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++..+.++.++++++++.|.+|.-+ +++.+|++.+ +|+..++.+ ..||+|+|..-+..+|..+|+
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNV-NGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECCCEECCHHHHHHTTC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEc-CEEEEEECCCCChhHHhhcCe
Confidence 3334445669999999999999755 4677888875 577777888 579999998877778877765
No 47
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=85.59 E-value=0.82 Score=43.97 Aligned_cols=59 Identities=22% Similarity=0.383 Sum_probs=46.4
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
+.+++|++++.|++|.-+ ++++.+|.+.. +|+..++.+ +.||+|+|..-++.+|..+||
T Consensus 202 ~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD--GKKVTGVKYKDRTTGEEKLIET-DGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEES--SSSEEEEEEEETTTCCEEEECC-SEEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecC--CceEEEEEEEEcCCCceEEEec-CEEEEeeCCccChHHHhhccc
Confidence 568999999999999765 35688898874 677677888 579999998777667665554
No 48
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=83.86 E-value=0.41 Score=51.08 Aligned_cols=48 Identities=21% Similarity=0.378 Sum_probs=36.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
.+|++|+ ++.|+.|..+ ++++.||... +|. +++| +.||||+|++-..+
T Consensus 136 ~~GVeI~-~~~Vt~L~~e--~g~V~GV~t~-dG~--~i~A-daVVLATG~~s~~~ 183 (637)
T 2zxi_A 136 QENLYIK-QEEVVDIIVK--NNQVVGVRTN-LGV--EYKT-KAVVVTTGTFLNGV 183 (637)
T ss_dssp CTTEEEE-ESCEEEEEES--SSBEEEEEET-TSC--EEEC-SEEEECCTTCBTCE
T ss_pred CCCCEEE-EeEEEEEEec--CCEEEEEEEC-CCc--EEEe-CEEEEccCCCccCc
Confidence 4799994 7899999887 4688888764 453 5778 57999999875443
No 49
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.16 E-value=1.2 Score=43.00 Aligned_cols=56 Identities=9% Similarity=0.126 Sum_probs=44.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
++.+++|++++.|.+|.-+ ++++++|++.+ +|+..++.+ ..||+|+|..-++.+|.
T Consensus 220 ~~~gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~ 277 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGD--GKLLNALRIKNTKKNEETDLPV-SGLFYAIGHTPATKIVA 277 (338)
T ss_dssp HCTTEEEECSEEEEEEEES--SSSEEEEEEEETTTTEEEEEEC-SEEEECSCEEECCGGGB
T ss_pred hcCCeEEeecceeEEEEcc--cCcEEEEEEEECCCCceEEEEe-CEEEEEeCCCCChhHhh
Confidence 4569999999999999876 45788999876 577778888 47999999876665543
No 50
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=82.70 E-value=0.62 Score=49.89 Aligned_cols=46 Identities=28% Similarity=0.440 Sum_probs=35.3
Q ss_pred CCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcH
Q psy10349 199 PNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 199 ~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp 251 (517)
+|++| .++.|+.|..+ ++++.+|... +| .+++| +.||+|+|+.-..
T Consensus 138 ~GV~I-~~~~V~~L~~e--~g~V~GV~t~-dG--~~I~A-d~VVLATGt~s~~ 183 (651)
T 3ces_A 138 PNLMI-FQQAVEDLIVE--NDRVVGAVTQ-MG--LKFRA-KAVVLTVGTFLDG 183 (651)
T ss_dssp TTEEE-EECCEEEEEES--SSBEEEEEET-TS--EEEEE-EEEEECCSTTTCC
T ss_pred CCCEE-EEEEEEEEEec--CCEEEEEEEC-CC--CEEEC-CEEEEcCCCCccC
Confidence 79999 57899999887 4678888764 45 35778 5799999986443
No 51
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=82.29 E-value=1.2 Score=47.41 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=43.1
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
.+|...+.+.+++|+.++.|++|..+ ++.+.+|.+..+|...+++| +-||.|.|+
T Consensus 132 ~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~A-dlVV~AdG~ 186 (591)
T 3i3l_A 132 KLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVES-DFVIDAGGS 186 (591)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEE-SEEEECCGG
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEc-CEEEECCCC
Confidence 34444444578999999999999876 35677888877787788999 579999997
No 52
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=80.97 E-value=1.5 Score=42.06 Aligned_cols=57 Identities=18% Similarity=0.170 Sum_probs=43.4
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--C-CeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--N-NKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~-g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
+++.+++|++++.|++|.-+ ++++.+|++.. + |+..++.+ ..||+|+|..-.+.+|.
T Consensus 194 l~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGD--QMGVTGVRLRDTQNSDNIESLDV-AGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp HHTSSEEEECSCEEEEEEEC--SSSEEEEEEECCTTCCCCEEEEC-SEEEECSCEEESCGGGT
T ss_pred cccCCeEEEcCceeEEEEcC--CCceEEEEEEeccCCCceEEEEc-CEEEEEeCCCCChHHhc
Confidence 34578999999999999765 34788898875 2 65567888 47999999776655543
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=80.87 E-value=0.63 Score=49.00 Aligned_cols=48 Identities=19% Similarity=0.227 Sum_probs=37.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~t 250 (517)
.+.+++|++++.|++|..+ ++++.+|++. +|+ +++|+ .||+|+|+-..
T Consensus 231 ~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~-~G~--~i~Ad-~VVlA~G~~s~ 278 (549)
T 3nlc_A 231 IELGGEIRFSTRVDDLHME--DGQITGVTLS-NGE--EIKSR-HVVLAVGHSAR 278 (549)
T ss_dssp HHTTCEEESSCCEEEEEES--SSBEEEEEET-TSC--EEECS-CEEECCCTTCH
T ss_pred HhcCCEEEeCCEEEEEEEe--CCEEEEEEEC-CCC--EEECC-EEEECCCCChh
Confidence 3458999999999999887 4578888775 344 47784 69999998553
No 54
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=80.61 E-value=2.1 Score=40.80 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=43.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
+..+++|++++.|++|.-+ ++++.+|++.+ +|+..++.+ +.||+|+|..-.+.+|.
T Consensus 191 ~~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 191 SLKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHNIEL-AGIFVQIGLLPNTNWLE 248 (310)
T ss_dssp TCTTEEEESSEEEEEEEES--SSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred hCCCeEEecCCceEEEEcC--CCcEEEEEEEECCCCcEEEEEc-CEEEEeeCCccCchHHh
Confidence 3469999999999999755 45788999875 477678888 57999999776655553
No 55
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=80.07 E-value=2.8 Score=41.15 Aligned_cols=59 Identities=17% Similarity=0.281 Sum_probs=42.8
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCC-----------------CCeEEEEEEE-----eCC------eEEEEEecceEE
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPN-----------------TKRVFGVEFM-----KNN------KKRVVYAKKEVV 242 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~-----------------~~~a~gV~~~-----~~g------~~~~v~a~keVI 242 (517)
++..+.+.+|++|+.++.|+.|+.+++ ..++.||.+. .++ ...+|+| |.||
T Consensus 166 L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A-k~VV 244 (344)
T 3jsk_A 166 VLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA-PVII 244 (344)
T ss_dssp HHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC-SEEE
T ss_pred HHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc-CEEE
Confidence 444444568999999999999988742 1289999874 123 4468999 5799
Q ss_pred EecCCcCc
Q psy10349 243 LSAGAFFS 250 (517)
Q Consensus 243 laaGai~t 250 (517)
+|.|.-..
T Consensus 245 ~ATG~~s~ 252 (344)
T 3jsk_A 245 STTGHDGP 252 (344)
T ss_dssp ECCCSSSS
T ss_pred ECCCCCch
Confidence 99996543
No 56
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=79.69 E-value=1.6 Score=43.91 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=48.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
++....++.+++|++++.|++|.-+ ++++++|++. +|+ ++.+ ..||+|+|..-...+|..+|+-
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~-dG~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQ-DGS--VIPA-DIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEES-SSC--EEEC-SEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeC-CCC--EEEc-CEEEECCCCccChHHHHhCCCC
Confidence 3434445679999999999999865 4678888775 454 4677 5799999988877888887764
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=79.22 E-value=3.5 Score=40.26 Aligned_cols=60 Identities=13% Similarity=0.056 Sum_probs=44.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEE-eCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++.+++|++++.|++|.-+ ++++.+|++. .+|+..++.+ +.||+|.|..-.+.+|..+|+
T Consensus 213 ~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEES--NGVLTRVHLRSSDGSKWTVEA-DRLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HHTSEEEESSEEEEEEEEE--TTEEEEEEEEETTCCEEEEEC-SEEEECCCBCCSCGGGGGSSC
T ss_pred hcCceEEEcCcCHHHhccC--CCceEEEEEEecCCCeEEEeC-CEEEECCCCCCCHHHHHhhcc
Confidence 4568999999999999876 4678888886 3676677888 579999996655555554443
No 58
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=78.93 E-value=2.4 Score=40.41 Aligned_cols=58 Identities=14% Similarity=0.115 Sum_probs=44.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLS 257 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~S 257 (517)
+..+++|++++.|.+|.-+ ++++.+|++.. +|+..++.+. .||+|.|..-...+|..+
T Consensus 190 ~~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGD--ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TCTTEEEETTEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred hCCCeEEEeCCEEEEEECC--CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 4579999999999999765 35677888875 6777788884 799999987665665444
No 59
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=78.86 E-value=1 Score=44.51 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=38.7
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
+++.+++|+.++.|++|..++ +++ +|+. ++. +++| +.||+|+|+. ++.|+...|+
T Consensus 174 ~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~--~~g--~~~a-~~vV~A~G~~-s~~l~~~~~~ 228 (382)
T 1ryi_A 174 AKMLGAEIFEHTPVLHVERDG--EAL-FIKT--PSG--DVWA-NHVVVASGVW-SGMFFKQLGL 228 (382)
T ss_dssp HHHTTCEEETTCCCCEEECSS--SSE-EEEE--TTE--EEEE-EEEEECCGGG-THHHHHHTTC
T ss_pred HHHCCCEEEcCCcEEEEEEEC--CEE-EEEc--CCc--eEEc-CEEEECCChh-HHHHHHhcCC
Confidence 345589999999999998763 444 5543 233 5788 5699999986 6667665543
No 60
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=78.58 E-value=1.6 Score=43.73 Aligned_cols=64 Identities=14% Similarity=0.235 Sum_probs=48.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
++....++.+++|++++.|++|..+ ++++++|++. +|+ ++.+ ..||+|+|..-...+|..+|+-
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~-dG~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLS-DGN--TLPC-DLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEET-TSC--EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeC-CCC--EEEc-CEEEECcCCccCHHHHHhCCCC
Confidence 3434445679999999999999876 4678888765 454 4677 5799999988777788877764
No 61
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=78.24 E-value=3.7 Score=39.43 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=44.7
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
.++.+++|++++.|++|.-+.++.++.+|++.. +|+..++.+ ..||+|.|..-...+|.
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~ 265 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKV-SGLFFAIGHEPATKFLD 265 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEec-CEEEEEeCCccchHHhh
Confidence 356799999999999997653212788888875 576678888 57999999876666553
No 62
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.89 E-value=3.2 Score=43.19 Aligned_cols=66 Identities=18% Similarity=0.233 Sum_probs=46.1
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCcHH-HHHHcCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPH-LLLLSGI 259 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~-lLl~SGI 259 (517)
++...+++.+++|++++.|++|..++ +++++++.+.. +|+ .++.+. .||+|+|..-+.. +|..+||
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~G~-~~i~aD-~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPNGE-MRIETD-FVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETTEE-EEEECS-CEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECCCc-EEEEcC-EEEECcCCccCCccCHHHcCC
Confidence 33343456789999999999998653 35666665553 443 468884 6999999876666 6666665
No 63
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=76.79 E-value=1.3 Score=44.50 Aligned_cols=50 Identities=14% Similarity=0.194 Sum_probs=38.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
++.+.+|++++.|++|..+ ++++ | ..+|+ ++.| +.||+|+|+-.+++||-
T Consensus 200 ~~~G~~i~~~~~V~~i~~~--~~~v--V--~~~g~--~~~a-d~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 200 MENKGKILTRKEVVEINIE--EKKV--Y--TRDNE--EYSF-DVAISNVGVRETVKLIG 249 (421)
T ss_dssp HTTTCEEESSCCEEEEETT--TTEE--E--ETTCC--EEEC-SEEEECSCHHHHHHHHC
T ss_pred HHCCCEEEcCCeEEEEEEE--CCEE--E--EeCCc--EEEe-CEEEECCCHHHHHHhcC
Confidence 4558999999999999876 4555 4 33554 4778 46999999998888763
No 64
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=76.71 E-value=1.8 Score=45.88 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=43.3
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-----CCeE-------EEEEecceEEEecCCcCc
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-----NNKK-------RVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-----~g~~-------~~v~a~keVIlaaGai~t 250 (517)
.+|...+.+.+++|+.++.|++|+.+++ ++++||.+.+ +|+. .+++| +.||+|.|+-..
T Consensus 148 ~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~A-d~VV~AdG~~S~ 218 (584)
T 2gmh_A 148 SWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHA-KVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEEC-SEEEECCCTTCH
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEEC-CEEEEeeCCCch
Confidence 3444433445899999999999998753 5788888753 4543 47888 579999998765
No 65
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=76.55 E-value=5 Score=39.02 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=39.4
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCC--CC--eEEEEEEEe-----CC------eEEEEEe--------------cceEE
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPN--TK--RVFGVEFMK-----NN------KKRVVYA--------------KKEVV 242 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~--~~--~a~gV~~~~-----~g------~~~~v~a--------------~keVI 242 (517)
+..+.+.+|++|+.++.|+.|+.+.+ ++ +++||.+.. ++ ...++.| .+.||
T Consensus 153 ~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV 232 (326)
T 2gjc_A 153 LSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVIL 232 (326)
T ss_dssp HHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEE
T ss_pred HHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEE
Confidence 33344568999999999999998742 14 899998741 22 3457888 35799
Q ss_pred EecCC
Q psy10349 243 LSAGA 247 (517)
Q Consensus 243 laaGa 247 (517)
+|+|.
T Consensus 233 ~ATG~ 237 (326)
T 2gjc_A 233 STTGH 237 (326)
T ss_dssp ECCCC
T ss_pred ECcCC
Confidence 99993
No 66
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=76.32 E-value=2.1 Score=40.71 Aligned_cols=58 Identities=19% Similarity=0.200 Sum_probs=45.2
Q ss_pred cCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEE-eCCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 195 IVERPNFHVMKKARVLKVLIDPNTKRVFGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 195 ~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
+.++.+++|++++.|.+|.-+ ++++.+|++. .+|+..++.+ ..||+|.|..-.+.+|.
T Consensus 192 ~~~~~gv~~~~~~~v~~i~~~--~~~~~~v~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 192 VKKNEKIELITSASVDEVYGD--KMGVAGVKVKLKDGSIRDLNV-PGIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHCTTEEEECSCEEEEEEEE--TTEEEEEEEECTTSCEEEECC-SCEEECSCEEECCGGGB
T ss_pred HHhcCCeEEEeCcEEEEEEcC--CCcEEEEEEEcCCCCeEEeec-CeEEEEEcCCCCchhhh
Confidence 335679999999999999766 4588888887 3677778888 47999999776665544
No 67
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.05 E-value=3 Score=40.95 Aligned_cols=58 Identities=28% Similarity=0.329 Sum_probs=43.8
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcH
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp 251 (517)
.+|...+.+.+.+++.++.|+.+..+ ++++++|....++...+++| +-||.|-| .+|.
T Consensus 106 ~~L~~~a~~~G~~~~~~~~v~~~~~~--~~~~~~v~~~~~~~~~~~~a-~~vIgAdG-~~S~ 163 (397)
T 3oz2_A 106 KHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRA-KMVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEE-EEEEECCC-TTCH
T ss_pred HHHHHHHHhcCcEEeeeeeeeeeeec--cceeeeeeecccccceEEEE-eEEEeCCc-cccH
Confidence 34544344568999999999999887 56899998888898899999 54555555 5554
No 68
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=75.20 E-value=0.66 Score=42.48 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=21.0
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+++|..|++ .|.+|+|||+.+.
T Consensus 14 GL~aA~~La~-~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 14 GLSAAQALTA-AGHQVHLFDKSRG 36 (336)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHH-CCCCEEEEECCCC
Confidence 7899999999 9999999999864
No 69
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=75.12 E-value=3.6 Score=39.48 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=43.3
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
.++.+++|++++.|++|.-+ +++.+|++.. +|+..++.+ +.||+|.|..-...+|.
T Consensus 198 ~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 198 FANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELAT-DGVFIFIGHVPNTAFVK 255 (325)
T ss_dssp HTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred HhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEc-CEEEEccCCCCChHHHh
Confidence 34569999999999999754 4678898874 677778888 57999999776655543
No 70
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=71.81 E-value=4.5 Score=36.92 Aligned_cols=49 Identities=27% Similarity=0.472 Sum_probs=36.0
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
.++++|+ ++.|++|..+ ++++.+|... +|+ ++++ +.||+|+|+.-..++
T Consensus 81 ~~gv~i~-~~~v~~i~~~--~~~v~~v~~~-~g~--~i~a-~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 81 LRPLHLF-QATATGLLLE--GNRVVGVRTW-EGP--PARG-EKVVLAVGSFLGARL 129 (232)
T ss_dssp CTTEEEE-ECCEEEEEEE--TTEEEEEEET-TSC--CEEC-SEEEECCTTCSSCEE
T ss_pred CCCcEEE-EeEEEEEEEe--CCEEEEEEEC-CCC--EEEC-CEEEECCCCChhhce
Confidence 3589999 6799999887 4577777653 454 5778 579999999665543
No 71
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=71.59 E-value=3.2 Score=41.89 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=36.4
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
+++.+++|++++.|++|..++ +. +.+...+. +++| +.||+|+|+.-.|++
T Consensus 142 l~~~Gv~i~~~~~V~~i~~~~--~~---~~V~~~~g--~i~a-d~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 142 MKEAGVQLRLETSIGEVERTA--SG---FRVTTSAG--TVDA-ASLVVASGGKSIPKM 191 (417)
T ss_dssp HHHHTCEEECSCCEEEEEEET--TE---EEEEETTE--EEEE-SEEEECCCCSSCGGG
T ss_pred HHHCCCEEEECCEEEEEEEeC--CE---EEEEECCc--EEEe-eEEEECCCCccCCCC
Confidence 344589999999999998773 32 34443333 6888 469999999987753
No 72
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=70.26 E-value=5 Score=41.73 Aligned_cols=54 Identities=20% Similarity=0.302 Sum_probs=42.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
.+|++|++++.|++|.-+ ++++++|.+.+ +|+..++.+ ..||+|.|..-+..+|
T Consensus 403 ~~gV~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 403 LKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHSVAL-AGIFVQIGLLPNTHWL 458 (521)
T ss_dssp CTTEEEECSEEEEEEEEC--SSSEEEEEEEETTTCCEEEEEC-SEEEECCCEEESCGGG
T ss_pred CCCcEEEeCCEEEEEEcC--CCcEEEEEEEeCCCCceEEEEc-CEEEECcCCCCCchHH
Confidence 379999999999999765 45788999875 577778888 4799999977555554
No 73
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=69.68 E-value=1.6 Score=43.77 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=34.4
Q ss_pred CCCCCeEEEcCcEEE---------EEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHH-HcCC
Q psy10349 196 VERPNFHVMKKARVL---------KVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLL-LSGI 259 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~---------ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl-~SGI 259 (517)
+.+.+++|+.++.|+ +|..+ ++++ +|+. ++. +++| +.||+|+|+. |+.|+. ..|+
T Consensus 182 ~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~--~~g--~i~a-~~VV~A~G~~-s~~l~~~~~g~ 246 (405)
T 3c4n_A 182 AIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVH--ETR--QIRA-GVIIVAAGAA-GPALVEQGLGL 246 (405)
T ss_dssp HHTTTCEEECSCEEEEETTEEEEECBCC----------CB--CCE--EEEE-EEEEECCGGG-HHHHHHHHHCC
T ss_pred HHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEE--CCc--EEEC-CEEEECCCcc-HHHHHHHhcCC
Confidence 345689999999999 77654 3344 4432 222 6888 5699999984 667766 5554
No 74
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=69.62 E-value=3.9 Score=40.77 Aligned_cols=54 Identities=17% Similarity=0.084 Sum_probs=37.9
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEE-eCCeEEEEEecceEEEecCCc
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFM-KNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~-~~g~~~~v~a~keVIlaaGai 248 (517)
+|...+.+.+++|+.++.|++|..++ +.++ |.+. .+|+..+++| +-||+|+|.-
T Consensus 111 ~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~-v~v~~~~g~~~~~~a-~~vV~A~G~~ 165 (421)
T 3nix_A 111 TLADEAARQGVDVEYEVGVTDIKFFG--TDSV-TTIEDINGNKREIEA-RFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEET--TEEE-EEEEETTSCEEEEEE-EEEEECCGGG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCCCEEEEEc-CEEEECCCCc
Confidence 44333334589999999999998874 3332 4444 4677778999 5799999954
No 75
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=69.41 E-value=0.97 Score=46.64 Aligned_cols=24 Identities=38% Similarity=0.483 Sum_probs=19.8
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ +|++|+|||+.+..
T Consensus 13 GL~aA~~La~-~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 13 GLALAIRLQA-AGIPVLLLEQRDKP 36 (501)
T ss_dssp HHHHHHHHHH-TTCCEEEECCC---
T ss_pred HHHHHHHHHH-CCCcEEEEccCCCC
Confidence 6899999999 99999999997543
No 76
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=68.70 E-value=3.6 Score=41.25 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=46.6
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCC--CCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPN--TKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQF 268 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~--~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~ 268 (517)
+|....++.+++|++++.|++|..+++ ++. +.+..++. +++| +.||+|+|+...|++ -..|.|- ..+++.
T Consensus 114 ~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~---~~v~~~~g--~i~a-d~VVlAtG~~s~p~~-g~~G~g~-~la~~~ 185 (401)
T 2gqf_A 114 MLKSECDKYGAKILLRSEVSQVERIQNDEKVR---FVLQVNST--QWQC-KNLIVATGGLSMPGL-GATPFGY-QIAEQF 185 (401)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECCSCSSCC---EEEEETTE--EEEE-SEEEECCCCSSCGGG-TCCSHHH-HHHHHT
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe---EEEEECCC--EEEC-CEEEECCCCccCCCC-CCChHHH-HHHHHC
Confidence 333333456899999999999987521 122 23333333 5888 469999999988863 2233322 344566
Q ss_pred CCCeee
Q psy10349 269 NIPVLA 274 (517)
Q Consensus 269 GI~~~~ 274 (517)
|++++.
T Consensus 186 G~~i~~ 191 (401)
T 2gqf_A 186 GIPVIP 191 (401)
T ss_dssp TCCEEE
T ss_pred CCCccc
Confidence 766543
No 77
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=66.91 E-value=3 Score=42.92 Aligned_cols=48 Identities=15% Similarity=0.287 Sum_probs=35.1
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCc
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai 248 (517)
.++.+.+|++++.|++|+.++ +++++||+.. +|+ +++| +.||+++|-+
T Consensus 266 ~~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~-~G~--~i~A-d~VI~a~~~~ 313 (475)
T 3p1w_A 266 CAINGGTFMLNKNVVDFVFDD-DNKVCGIKSS-DGE--IAYC-DKVICDPSYV 313 (475)
T ss_dssp HHHC--CEESSCCEEEEEECT-TSCEEEEEET-TSC--EEEE-EEEEECGGGC
T ss_pred HHHcCCEEEeCCeEEEEEEec-CCeEEEEEEC-CCc--EEEC-CEEEECCCcc
Confidence 345689999999999999843 4689999774 344 4778 4699999866
No 78
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=65.66 E-value=6.8 Score=37.54 Aligned_cols=64 Identities=19% Similarity=0.139 Sum_probs=45.5
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
|...+++.+++|++++.|.+|.-+ +++.+|++.. +|+..++.+ ..||+|.|.--...+|..+|+
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEV-DAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECCCEEEECGGGGGSCC
T ss_pred HHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEec-CEEEEeecCCCCchHhhhcce
Confidence 333345668999999999999753 4577888864 576677888 479999997655555554443
No 79
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=65.33 E-value=5.2 Score=40.63 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=39.8
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEE--e-CCeEEEEEecceEEEecCCcCcHH
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFM--K-NNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~--~-~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
.|+....++-+.+|..+++|++|..+.++++...+.+. + .|+..++.++ .||||+|+ +|.
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d-~lVlAtG~--~p~ 193 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR-ALVVSPGG--TPR 193 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES-EEEECCCC--EEC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC-EEEECCCC--CCC
Confidence 35544444546789999999999876323455444443 3 3566688895 69999997 554
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=64.84 E-value=1.6 Score=42.26 Aligned_cols=61 Identities=18% Similarity=0.176 Sum_probs=39.9
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSG 258 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SG 258 (517)
|+....++.+++++.++.|++|..+ ++...+|+. .++ ++.+ +.||+|+|+...|.++...|
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~-~~g---~~~~-d~vV~AtG~~~~~~~~~~~g 141 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHF--GERLRVVAR-DGR---QWLA-RAVISATGTWGEAYTPEYQG 141 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEE--TTEEEEEET-TSC---EEEE-EEEEECCCSGGGBCCCCCTT
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEC--CCcEEEEEe-CCC---EEEe-CEEEECCCCCCCCCCCCCCC
Confidence 4444344568899999999999887 344333332 233 5778 46999999877765544333
No 81
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=64.79 E-value=7.8 Score=36.85 Aligned_cols=59 Identities=10% Similarity=0.158 Sum_probs=44.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++.++++++++.|.+|.-+ ++ ..+|.+.+ +++..++.+ ..||+|.|..-.+.+|..+|+
T Consensus 200 ~~~gv~~~~~~~v~~i~~~--~~-~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGE--DK-IEQLVLEEVKGDRKEILEI-DDLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HHSSCEEETTEEEEEEECS--SS-CCEEEEEETTSCCEEEEEC-SEEEECCCEECCCGGGGGSSC
T ss_pred hcCCeEEEeCceeeEEecC--Cc-eEEEEEEecCCCceEEEEC-CEEEEeeccCCCchHHhhcCc
Confidence 4568999999999999755 23 66787775 456677888 579999998776666655554
No 82
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=63.74 E-value=1.6 Score=42.86 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=21.4
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|..|++ .|.+|+|||+.+..
T Consensus 16 Gl~~A~~La~-~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 16 GSTAARYAAK-YGLKTLMIEKRPEI 39 (397)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSST
T ss_pred HHHHHHHHHH-CCCcEEEEeCCCCC
Confidence 7899999999 99999999998643
No 83
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=63.10 E-value=1.7 Score=44.39 Aligned_cols=47 Identities=19% Similarity=0.092 Sum_probs=35.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai 248 (517)
++.+.+|++++.|++|..+.+++++++|.. +|+ +++|+ .||+|+|..
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~--~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDTGKFEGVKT--KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTTTEEEEEEE--TTE--EEECS-CEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEECCCCeEEEEEE--CCe--EEECC-EEEECCCcc
Confidence 345789999999999988631357888865 454 46784 699999986
No 84
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=63.09 E-value=6.5 Score=40.14 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=43.3
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
.+...+++.+++|++++.|++|.-+ +++++ |.+ .+|+ ++.+ +.||+|+|..-.+.||..+||
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~-v~~-~~g~--~i~a-D~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGE--NGKVA-RVI-TDKR--TLDA-DLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEES--SSBEE-EEE-ESSC--EEEC-SEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEcc--CCeEE-EEE-eCCC--EEEc-CEEEECCCCCcCHHHHHhCCc
Confidence 3333445678999999999999764 34554 444 3554 5677 479999998766667766665
No 85
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=62.49 E-value=1.8 Score=44.61 Aligned_cols=24 Identities=21% Similarity=0.379 Sum_probs=21.7
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|++|+|||+++..
T Consensus 32 g~~~a~~l~~-~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 32 ECILSGLLSH-YGKKILVLDRNPYY 55 (475)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCcEEEEeccCCC
Confidence 6789999999 89999999999765
No 86
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=61.15 E-value=7.6 Score=38.29 Aligned_cols=50 Identities=8% Similarity=-0.067 Sum_probs=36.3
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCc
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~t 250 (517)
+.+++|+.++.|++|..+++ + ...|++..+|+..++++ +-||.|.|+--.
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~-~-~~~v~~~~~g~~~~~~a-~~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQG-E-RPYVTFERDGERLRLDC-DYIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECTTS-S-SCEEEEEETTEEEEEEC-SEEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEecC-C-ceEEEEecCCcEEEEEe-CEEEECCCCCcH
Confidence 34899999999999986532 2 23466645787778889 579999886443
No 87
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=61.10 E-value=4.4 Score=41.44 Aligned_cols=67 Identities=18% Similarity=0.269 Sum_probs=44.4
Q ss_pred hhcccCCCCCeE--EEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 191 FLRPIVERPNFH--VMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 191 ~l~~~~~~~nl~--i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
||....++.+++ |..++.|++|..+.++++ ..|++.. +|+..++.++ .||+|.|....|+++..-|+
T Consensus 106 ~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p~ipG~ 176 (464)
T 2xve_A 106 YIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVPEFEGF 176 (464)
T ss_dssp HHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCCCCBTT
T ss_pred HHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccCCCCCc
Confidence 444333333566 889999999987743222 2455544 4666778884 69999999888887654443
No 88
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=59.58 E-value=7.2 Score=33.62 Aligned_cols=52 Identities=27% Similarity=0.175 Sum_probs=34.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++.+++|+.+ +|++|..+++ . ..|+. .+| ++.+ +.||+|+|.. |.++...|+
T Consensus 67 ~~~gv~v~~~-~v~~i~~~~~--~-~~v~~-~~g---~i~a-d~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 67 RRYGAEVRPG-VVKGVRDMGG--V-FEVET-EEG---VEKA-ERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHTTCEEEEC-CCCEEEECSS--S-EEEEC-SSC---EEEE-EEEEECCTTC--CHHHHHHTC
T ss_pred HHcCCEEEeC-EEEEEEEcCC--E-EEEEE-CCC---EEEE-CEEEECCCCC--CCccccCCC
Confidence 4457999999 9999987632 2 22222 244 5778 5799999975 456555554
No 89
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=59.00 E-value=2.4 Score=42.46 Aligned_cols=24 Identities=21% Similarity=0.250 Sum_probs=21.2
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+.+|.+|++ .|.+|+|||+++..
T Consensus 12 GLsaA~~La~-~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 12 GLLSAARLSK-AGHEVEVFERLPIT 35 (425)
T ss_dssp HHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred HHHHHHHHHh-CCCceEEEeCCCCC
Confidence 6789999999 89999999998653
No 90
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=58.58 E-value=11 Score=40.33 Aligned_cols=47 Identities=21% Similarity=0.473 Sum_probs=35.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~t 250 (517)
+.+|++|+ +..|+.|..+ ++++.||... +|. +++| +.||+|+|+.-.
T Consensus 129 ~~~GV~I~-~~~V~~L~~d--~g~V~GV~t~-~G~--~i~A-d~VVLATG~~s~ 175 (641)
T 3cp8_A 129 HEPNIDLL-QDTVIGVSAN--SGKFSSVTVR-SGR--AIQA-KAAILACGTFLN 175 (641)
T ss_dssp TCTTEEEE-ECCEEEEEEE--TTEEEEEEET-TSC--EEEE-EEEEECCTTCBT
T ss_pred hCCCCEEE-eeEEEEEEec--CCEEEEEEEC-CCc--EEEe-CEEEECcCCCCC
Confidence 34799996 5599999887 4688888754 454 5778 569999998733
No 91
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=57.79 E-value=2.6 Score=42.29 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=21.3
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+.+|.+|++ .|.+|+|||+.+..
T Consensus 12 GLsaA~~La~-~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 12 GLLAGAFLAR-NGHEIIVLEKSAMI 35 (421)
T ss_dssp HHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCeEEEEeCCCCC
Confidence 6789999999 89999999998654
No 92
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=57.63 E-value=5.7 Score=40.09 Aligned_cols=63 Identities=13% Similarity=0.137 Sum_probs=44.2
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
..+++.+++|++++.|++|.-+.+++++.+|++. +|+ ++.+ ..||+|+|..-...||..+|+-
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~-~G~--~i~~-D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCE-DGT--RLPA-DLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTCCEEEEEET-TSC--EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeC-CCC--EEEc-CEEEECCCCCcCcchhhccCCC
Confidence 3334568999999999999762013567777664 453 4667 5799999987666677777753
No 93
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=57.32 E-value=12 Score=36.95 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=33.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEE-EEEEEeCCeEEEEEecceEEEecCCcCc
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVF-GVEFMKNNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~-gV~~~~~g~~~~v~a~keVIlaaGai~t 250 (517)
+.++++|+.+++|++|..++ +.++ .|++ .+|+ ++++ +.||+|.|+--.
T Consensus 119 ~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~-~~g~--~~~a-d~vV~AdG~~s~ 167 (399)
T 2x3n_A 119 GEATVEMLFETRIEAVQRDE--RHAIDQVRL-NDGR--VLRP-RVVVGADGIASY 167 (399)
T ss_dssp TCTTEEEECSCCEEEEEECT--TSCEEEEEE-TTSC--EEEE-EEEEECCCTTCH
T ss_pred hcCCcEEEcCCEEEEEEEcC--CceEEEEEE-CCCC--EEEC-CEEEECCCCChH
Confidence 34589999999999998774 3443 3444 3454 5778 579999997543
No 94
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=56.82 E-value=11 Score=38.25 Aligned_cols=24 Identities=25% Similarity=0.418 Sum_probs=21.6
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|++|+|||+.+..
T Consensus 23 GL~aA~~La~-~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 23 ECILSGLLSV-DGKKVLHIDKQDHY 46 (453)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCeEEEEeCCCCC
Confidence 6889999999 89999999998765
No 95
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=55.82 E-value=2.2 Score=44.19 Aligned_cols=61 Identities=10% Similarity=0.090 Sum_probs=41.0
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
+|...+++.+++|+.++.|++|..+++++....|.+.. +|+..++++ +.||+|.|+-..++
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~a-d~VV~A~G~~S~~r 233 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEF-DVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCB-SEEEECCCTTCCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEc-CEEEECCCCCcccc
Confidence 34333345689999999999998752223445666642 454345778 57999999876664
No 96
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=55.70 E-value=2.2 Score=43.91 Aligned_cols=25 Identities=12% Similarity=0.229 Sum_probs=21.4
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++..|.+|+|||+.+..
T Consensus 22 GLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 22 GLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp HHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred HHHHHHHHHhhCCCCEEEEECCCCC
Confidence 7899999997459999999998654
No 97
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=55.33 E-value=2.7 Score=42.20 Aligned_cols=44 Identities=14% Similarity=0.097 Sum_probs=29.6
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
.++.+ +|++++.|++|..++ +.++ |++ .+|+ +++| +.||+|+|.
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~--~~v~-v~~-~~g~--~~~a-d~vi~a~~~ 257 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSG--DVVN-VTV-KDGH--AFQA-HSVIVATPM 257 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSS--SSEE-EEE-TTSC--CEEE-EEEEECSCG
T ss_pred HhhCC-ceEeCCEEEEEEEcC--CeEE-EEE-CCCC--EEEe-CEEEEecCc
Confidence 34445 999999999998763 3332 433 2454 4678 469999974
No 98
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=55.08 E-value=11 Score=38.48 Aligned_cols=64 Identities=17% Similarity=0.207 Sum_probs=42.5
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeC--CeEEEEEecceEEEecCCcCcHHH--HHHcCC
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN--NKKRVVYAKKEVVLSAGAFFSPHL--LLLSGI 259 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~--g~~~~v~a~keVIlaaGai~tp~l--Ll~SGI 259 (517)
+...+++.+++|++++.|++|.-+ ++. ..|++..+ |+..++.+ ..||+|.|..-...+ |..+||
T Consensus 216 l~~~l~~~gV~i~~~~~v~~i~~~--~~~-~~v~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~l~l~~~g~ 283 (464)
T 2eq6_A 216 LRRALEKEGIRVRTKTKAVGYEKK--KDG-LHVRLEPAEGGEGEEVVV-DKVLVAVGRKPRTEGLGLEKAGV 283 (464)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEE--TTE-EEEEEEETTCCSCEEEEE-SEEEECSCEEESCTTSSHHHHTC
T ss_pred HHHHHHhcCCEEEcCCEEEEEEEe--CCE-EEEEEeecCCCceeEEEc-CEEEECCCcccCCCCCChhhcCc
Confidence 333345568999999999999765 233 33555435 76567888 479999997655544 344443
No 99
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=54.75 E-value=3.1 Score=41.10 Aligned_cols=24 Identities=33% Similarity=0.477 Sum_probs=21.1
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|.+|+|||+++..
T Consensus 13 Gl~~A~~l~~-~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 13 GAVCANELKK-LNKKVLVIEKRNHI 36 (367)
T ss_dssp HHHHHHHHGG-GTCCEEEECSSSSS
T ss_pred HHHHHHHHHh-CCCcEEEEecCCCC
Confidence 6789999999 79999999998653
No 100
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=53.58 E-value=17 Score=37.69 Aligned_cols=56 Identities=14% Similarity=0.051 Sum_probs=37.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEE--EEeCCeEEEEEecceEEEecCCc
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVE--FMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~--~~~~g~~~~v~a~keVIlaaGai 248 (517)
+|...+.+.+++|+.+++|+.|..+++ +++.+|. +.+.+...+++| +-||.|.|+-
T Consensus 125 ~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~~~~i~a-~~vV~AdG~~ 182 (535)
T 3ihg_A 125 ILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDGEYDLRA-GYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTEEEEEEE-EEEEECCCTT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCCeEEEEe-CEEEECCCCc
Confidence 443433334899999999999988742 3333444 444333678889 5789999875
No 101
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=52.82 E-value=9.1 Score=38.62 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=34.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCc
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai 248 (517)
+.+.+|++++.|++|..+ ++++++|.. +|+ +++| +.||+|+|..
T Consensus 246 ~~G~~i~~~~~V~~I~~~--~~~v~~v~~--~g~--~~~a-d~VV~a~~~~ 289 (433)
T 1d5t_A 246 IYGGTYMLNKPVDDIIME--NGKVVGVKS--EGE--VARC-KQLICDPSYV 289 (433)
T ss_dssp HHTCCCBCSCCCCEEEEE--TTEEEEEEE--TTE--EEEC-SEEEECGGGC
T ss_pred HcCCEEECCCEEEEEEEe--CCEEEEEEE--CCe--EEEC-CEEEECCCCC
Confidence 447899999999999887 468888763 565 4678 5699999976
No 102
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=52.63 E-value=18 Score=37.20 Aligned_cols=58 Identities=21% Similarity=0.115 Sum_probs=38.6
Q ss_pred hhhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCc
Q psy10349 189 QAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 189 ~~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~t 250 (517)
..+|...+.+.+++|..+++|+.|..++ ..++ |++.+.....++++ +-||.|.|+--+
T Consensus 109 ~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a-~~vVgADG~~S~ 166 (500)
T 2qa1_A 109 ETHLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEGKHTLRA-AYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEETTEEEEEEE-SEEEECCCTTCH
T ss_pred HHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCCCEEEEe-CEEEECCCcchH
Confidence 3344443334579999999999998874 3444 55655323567889 578888887543
No 103
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=52.15 E-value=5.9 Score=39.63 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=45.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
++....++.+++|++++.|.+|.-+ + ++.+|++. +|+ ++.+ ..||+|.|..-...+|..+|+-
T Consensus 190 ~l~~~l~~~GV~i~~~~~v~~i~~~--~-~~~~v~~~-dg~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 190 WLRGLLTELGVQVELGTGVVGFSGE--G-QLEQVMAS-DGR--SFVA-DSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEECS--S-SCCEEEET-TSC--EEEC-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEecc--C-cEEEEEEC-CCC--EEEc-CEEEEeeCCeecHHHHHhCCCc
Confidence 3334345678999999999999754 2 55666654 454 4667 5799999988777788877754
No 104
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=51.48 E-value=3.1 Score=41.97 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=20.7
Q ss_pred CchhccccccCCCC-eEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDW-KVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~-~VlvlEaG~~ 24 (517)
|+.+|.+|++ .|. +|+|||++..
T Consensus 18 GlsaA~~La~-~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 18 GTSTALHLAR-RGYTNVTVLDPYPV 41 (438)
T ss_dssp HHHHHHHHHH-TTCCCEEEEESSCS
T ss_pred HHHHHHHHHH-cCCCcEEEEeCCCC
Confidence 6789999999 899 9999999864
No 105
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=50.04 E-value=17 Score=38.81 Aligned_cols=61 Identities=23% Similarity=0.219 Sum_probs=41.3
Q ss_pred CCC-CeEEEcCcEEEEEEecCC-CCeEEEEEEEe-----CCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 197 ERP-NFHVMKKARVLKVLIDPN-TKRVFGVEFMK-----NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 197 ~~~-nl~i~~~~~V~ri~~~~~-~~~a~gV~~~~-----~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
+.+ +++|..+++|+.|..+++ ++..+.|++.. +|...+++| +-||.|.|+--+.+=++ ||.
T Consensus 153 ~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a-~~vVgADG~~S~vR~~l--g~~ 220 (639)
T 2dkh_A 153 NSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQA-RYVVGCDGARSNVRRAI--GRQ 220 (639)
T ss_dssp HSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEE-EEEEECCCTTCHHHHHT--TCC
T ss_pred hCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEe-CEEEECCCcchHHHHHh--CCC
Confidence 344 669999999999988742 12234466664 677778999 57999999765443333 553
No 106
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=49.96 E-value=14 Score=37.41 Aligned_cols=65 Identities=15% Similarity=0.120 Sum_probs=41.9
Q ss_pred hhcccC-CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCcHHH--HHHcCC
Q psy10349 191 FLRPIV-ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPHL--LLLSGI 259 (517)
Q Consensus 191 ~l~~~~-~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~l--Ll~SGI 259 (517)
++...+ ++.+++|++++.|++|.-++ +. ..|++.. +|+..++.+ ..||+|+|..-+..+ |..+||
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNG--DS-VSLEVEGKNGKRETVTC-EALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECS--SS-EEEEEECC---EEEEEE-SEEEECSCEEECCTTSCHHHHTC
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcC--Ce-EEEEEEcCCCceEEEEC-CEEEECCCcccCCCCCCchhcCC
Confidence 343444 56789999999999997653 22 3444442 465567888 479999998766665 445554
No 107
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=49.58 E-value=14 Score=39.48 Aligned_cols=47 Identities=9% Similarity=0.066 Sum_probs=33.7
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAG 246 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaG 246 (517)
....+.+|++++.|.+|+++.+.++|+||. ..+|+ +++| +.||..+.
T Consensus 388 ~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~-~~~Ge--~i~A-~~VVs~~~ 434 (650)
T 1vg0_A 388 CAVFGGIYCLRHSVQCLVVDKESRKCKAVI-DQFGQ--RIIS-KHFIIEDS 434 (650)
T ss_dssp HHHTTCEEESSCCEEEEEEETTTCCEEEEE-ETTSC--EEEC-SEEEEEGG
T ss_pred HHHcCCEEEeCCEeeEEEEeCCCCeEEEEE-eCCCC--EEEc-CEEEEChh
Confidence 345678999999999999984327899987 33565 4678 45666444
No 108
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=49.53 E-value=3.7 Score=40.32 Aligned_cols=22 Identities=23% Similarity=0.428 Sum_probs=20.1
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 29 Gl~~A~~La~-~G~~V~llE~~~ 50 (382)
T 1ryi_A 29 GSAIAYYLAK-ENKNTALFESGT 50 (382)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSS
T ss_pred HHHHHHHHHh-CCCcEEEEeCCC
Confidence 6789999999 899999999985
No 109
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=49.50 E-value=3.7 Score=40.13 Aligned_cols=22 Identities=18% Similarity=0.166 Sum_probs=20.0
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 18 Gls~A~~La~-~G~~V~vle~~~ 39 (363)
T 1c0p_A 18 GLSSALILAR-KGYSVHILARDL 39 (363)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSC
T ss_pred HHHHHHHHHh-CCCEEEEEeccC
Confidence 6789999999 899999999975
No 110
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=48.96 E-value=29 Score=35.24 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=31.0
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
.+|++++.|++|..++ ++++ |.+.+.+...+++|+ .||+++..
T Consensus 252 ~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad-~vI~a~p~ 294 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITAD-YAICTIPP 294 (489)
T ss_dssp GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEES-EEEECSCH
T ss_pred CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECC-EEEECCCH
Confidence 5799999999998873 4444 555554555678884 69999864
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=48.88 E-value=3.8 Score=39.32 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=33.5
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEE-eCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+++|++++.|++|..+++ . |.+. .+|+ ....+ +.||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~~--~---~~v~~~~g~-~~~~a-~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEE--H---WNLLDAEGQ-NHGPF-SHVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECSS--C---EEEEETTSC-EEEEE-SEEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeCC--E---EEEEeCCCc-Ccccc-CEEEEcCCHHHHHHhh
Confidence 789999999999987742 2 3333 3454 33457 4699999987666655
No 112
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=48.65 E-value=9.7 Score=36.55 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=40.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
++.++++++++.|.+|.-+ +++.+|++.. +|+..++.+. .||+|.|..-.+.+|
T Consensus 202 ~~~gV~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGD---TTVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGLV 257 (335)
T ss_dssp HCTTEEEECSEEEEEEECS---SSCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTTT
T ss_pred ccCCcEEEeCceeEEEecC---CcEeEEEEEEcCCCceEEeecC-EEEEccCCccChhHh
Confidence 4579999999999999754 2466777764 5666678884 799999977655554
No 113
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=48.39 E-value=13 Score=38.24 Aligned_cols=59 Identities=22% Similarity=0.271 Sum_probs=42.3
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
...++.+++|++++.|++|.-+ ++++ .|++ .+|+ ++.+ ..||+|+|..-+..||..+||
T Consensus 234 ~~l~~~GV~v~~~~~V~~i~~~--~~~~-~v~l-~dG~--~i~a-D~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 234 EKVRREGVKVMPNAIVQSVGVS--SGKL-LIKL-KDGR--KVET-DHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHTTTCEEECSCCEEEEEEE--TTEE-EEEE-TTSC--EEEE-SEEEECCCEEECCTTHHHHTC
T ss_pred HHHHhcCCEEEeCCEEEEEEec--CCeE-EEEE-CCCC--EEEC-CEEEECCCCCccHHHHHHcCC
Confidence 3345678999999999999765 3333 4444 3554 5677 579999998877777777775
No 114
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=48.13 E-value=8.9 Score=38.75 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=37.6
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCe-EEEEEecceEEEecCCcCcHHHHHHcC
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNK-KRVVYAKKEVVLSAGAFFSPHLLLLSG 258 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~-~~~v~a~keVIlaaGai~tp~lLl~SG 258 (517)
+..|..++.|++|..+. +. ..|++.+ +|+ ..++.+ +.||+|.|+...|.+.-..|
T Consensus 129 ~~~i~~~t~V~~v~~~~--~~-~~V~~~~~~~G~~~~~~~~-d~VVvAtG~~s~p~~p~i~G 186 (447)
T 2gv8_A 129 LPFIKLATDVLDIEKKD--GS-WVVTYKGTKAGSPISKDIF-DAVSICNGHYEVPYIPNIKG 186 (447)
T ss_dssp GGGEECSEEEEEEEEET--TE-EEEEEEESSTTCCEEEEEE-SEEEECCCSSSSBCBCCCBT
T ss_pred hCeEEeCCEEEEEEeCC--Ce-EEEEEeecCCCCeeEEEEe-CEEEECCCCCCCCCCCCCCC
Confidence 45788899999997652 32 2344443 255 556788 46999999988887654333
No 115
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=47.80 E-value=20 Score=36.82 Aligned_cols=55 Identities=16% Similarity=0.118 Sum_probs=36.9
Q ss_pred hhhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcC
Q psy10349 190 AFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 190 ~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~ 249 (517)
.+|...+.+.+++|..+++|+.|..++ ..++ |++.+ +| ..+++| +-||.|.|+--
T Consensus 111 ~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g-~~~~~a-~~vVgADG~~S 166 (499)
T 2qa2_A 111 SVLEEWALGRGAELLRGHTVRALTDEG--DHVV-VEVEGPDG-PRSLTT-RYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHTTCEEEESCEEEEEEECS--SCEE-EEEECSSC-EEEEEE-EEEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCC-cEEEEe-CEEEEccCccc
Confidence 344343334579999999999998774 3343 55554 34 467888 56888888743
No 116
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=47.74 E-value=3.5 Score=41.20 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=21.1
Q ss_pred CchhccccccCC-CCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENP-DWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~-g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ . |.+|+|||+.+..
T Consensus 19 Gl~aA~~L~~-~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 19 GLTIAERVAT-QLDKRVLVLERRPHI 43 (399)
T ss_dssp HHHHHHHHHH-HSCCCEEEECSSSSS
T ss_pred HHHHHHHHHH-hCCCCEEEEeCCCCC
Confidence 6789999999 6 9999999998754
No 117
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=47.46 E-value=15 Score=37.85 Aligned_cols=59 Identities=15% Similarity=0.183 Sum_probs=40.3
Q ss_pred hhhhhcccCCCCCeEEEcCcEEEEEEecCCCC-----eEEEEEEEe--CCeEEEEEecceEEEecCC
Q psy10349 188 SQAFLRPIVERPNFHVMKKARVLKVLIDPNTK-----RVFGVEFMK--NNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 188 ~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~~~-----~a~gV~~~~--~g~~~~v~a~keVIlaaGa 247 (517)
...||..++++-+..|..+++|++|..++.+. ..--|+..+ +|+..++.|+ .||+|.|.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 34577665555556799999999998764322 123444443 5777888894 69999994
No 118
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=47.33 E-value=9.3 Score=38.84 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=36.9
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
..+++.+++|++++.|++|..+++ ....|++..+|+ +.+ ..||+|+|..-...+
T Consensus 219 ~~l~~~Gv~i~~~~~v~~i~~~~~--~~~~v~~~~~g~---i~a-D~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 219 AAMEEKGIRILCEDIIQSVSADAD--GRRVATTMKHGE---IVA-DQVMLALGRMPNTNG 272 (463)
T ss_dssp HHHHHTTCEEECSCCEEEEEECTT--SCEEEEESSSCE---EEE-SEEEECSCEEESCTT
T ss_pred HHHHHCCCEEECCCEEEEEEEcCC--CEEEEEEcCCCe---EEe-CEEEEeeCcccCCCC
Confidence 334567899999999999987632 233454223454 778 479999997655544
No 119
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=46.79 E-value=16 Score=37.16 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=41.8
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHH--HHHcCC
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHL--LLLSGI 259 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~l--Ll~SGI 259 (517)
+...+++.+++|++++.|++|.-++ +....|++.. .+...++.+ ..||+|+|..-...+ |..+||
T Consensus 226 l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~~~~~~i~~-D~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 226 FQRILQKQGFKFKLNTKVTGATKKS--DGKIDVSIEAASGGKAEVITC-DVLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECT--TSCEEEEEEETTSCCCEEEEE-SEEEECSCEEECCTTSSHHHHTC
T ss_pred HHHHHHHCCCEEEeCceEEEEEEcC--CceEEEEEEecCCCCceEEEc-CEEEECcCCCcCCCcCCchhcCC
Confidence 3333456789999999999998653 2223455432 333356778 479999998766555 444554
No 120
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=46.57 E-value=5 Score=38.66 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=20.2
Q ss_pred Cchhcccccc-CCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTE-NPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae-~~g~~VlvlEaG~~ 24 (517)
|+++|.+|++ ..|.+|+|+|+++.
T Consensus 77 GlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 77 GLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp HHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCC
Confidence 6789999985 37999999999864
No 121
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=45.88 E-value=14 Score=37.55 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=41.4
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH--HHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL--LLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l--Ll~SGI 259 (517)
..+++.+++|++++.|++|.-++ +. ..|++..+|+..++.+ ..||+|+|..-...+ |..+||
T Consensus 220 ~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~g~~~~~~~-D~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 220 KQFKKLGVTILTATKVESIADGG--SQ-VTVTVTKDGVAQELKA-EKVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHHHHTCEEECSCEEEEEEECS--SC-EEEEEESSSCEEEEEE-SEEEECSCEEECCSSSCHHHHTC
T ss_pred HHHHHcCCEEEeCcEEEEEEEcC--Ce-EEEEEEcCCceEEEEc-CEEEECCCCCccCCCCCchhcCC
Confidence 33445689999999999997652 22 2344443565567888 479999997765555 444443
No 122
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=45.70 E-value=23 Score=34.77 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=42.7
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
++...+++.+++|++++.|++|..++ +. ..|++ .+|+ ++.+ +.||+|+|.--...||..+|+-
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~-~~g~--~i~~-d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAG--EG-LEAHL-SDGE--VIPC-DLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEET--TE-EEEEE-TTSC--EEEE-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecC--CE-EEEEE-CCCC--EEEC-CEEEECcCCCcCHHHHHHCCCC
Confidence 33343456789999999999997652 32 23433 3453 4677 4699999987666677777753
No 123
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=45.51 E-value=23 Score=35.67 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=37.4
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCc
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFS 250 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~t 250 (517)
..+++|++++.|++|..+. +. ..|.+.. +|+..++.+. .||+|+|..-.
T Consensus 328 ~~~v~i~~~~~v~~v~~~~--~~-~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 328 IPRHAFRCMTTVERATATA--QG-IELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp CCCSEEETTEEEEEEEEET--TE-EEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred CCCeEEEeCCEEEEEEecC--CE-EEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 3689999999999998763 32 3455553 6777888894 79999997766
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.26 E-value=16 Score=36.85 Aligned_cols=56 Identities=13% Similarity=0.116 Sum_probs=38.8
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
..+++.+++|++++.|++|.-+. +. ..|++..+|...++.+ ..||+|+|..-...+
T Consensus 219 ~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~g~~~~~~~-D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 219 KRLKKKGVEVVTNALAKGAEERE--DG-VTVTYEANGETKTIDA-DYVLVTVGRRPNTDE 274 (455)
T ss_dssp HHHHHTTCEEEESEEEEEEEEET--TE-EEEEEEETTEEEEEEE-SEEEECSCEEESCSS
T ss_pred HHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEEEeCCceeEEEc-CEEEECcCCCcccCc
Confidence 33445689999999999997652 33 3344444555567888 479999997655544
No 125
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=43.97 E-value=18 Score=34.47 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=20.7
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 14 Gl~~A~~L~~-~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 14 GLSAAQALTA-AGHQVHLFDKSRG 36 (336)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHH-CCCcEEEEECCCC
Confidence 6789999999 8999999999863
No 126
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=43.77 E-value=18 Score=36.83 Aligned_cols=60 Identities=10% Similarity=0.132 Sum_probs=39.9
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
++...+++.+++|++++.|++|..++++ ....|++.. ++...++.+ ..||+|+|..-...
T Consensus 229 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 229 ATQKFLKKQGLDFKLSTKVISAKRNDDK-NVVEIVVEDTKTNKQENLEA-EVLLVAVGRRPYIA 290 (478)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEETTT-TEEEEEEEETTTTEEEEEEE-SEEEECSCEEECCT
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEecCC-CeEEEEEEEcCCCCceEEEC-CEEEECCCCCcCCC
Confidence 3333345678999999999999762112 344566653 455567888 47999999765544
No 127
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=43.64 E-value=6.6 Score=39.91 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=34.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
.+.+.+|.+++.|++|..++ +.+..|.. ++. ++.|+ .||+|+++-...+||
T Consensus 245 ~~~g~~i~~~~~V~~i~~~~--~~~~~v~~--~~~--~~~ad-~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 245 TSRGVSVLRGQPVCGLSLQA--EGRWKVSL--RDS--SLEAD-HVISAIPASVLSELL 295 (477)
T ss_dssp HHTTCEEECSCCCCEEEECG--GGCEEEEC--SSC--EEEES-EEEECSCHHHHHHHS
T ss_pred HhcCCEEEeCCEEEEEEEcC--CceEEEEE--CCe--EEEcC-EEEECCCHHHHHHhc
Confidence 34578999999999998763 23334432 343 47784 699999876555553
No 128
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=43.37 E-value=5.3 Score=39.33 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=20.8
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 16 Gl~~A~~La~-~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 16 GSTAARYAAK-YGLKTLMIEKRPE 38 (397)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHH-CCCCEEEEeCCCC
Confidence 6789999999 8999999999974
No 129
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=42.49 E-value=23 Score=36.18 Aligned_cols=49 Identities=20% Similarity=0.189 Sum_probs=36.0
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCcHHH
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
++|++++.|++|..++ +.++ |++.. +|+..++.+. .||+|.|..-...+
T Consensus 229 V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D-~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 229 FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQ-YVLAATGRKANVDK 278 (492)
T ss_dssp SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEES-EEEECSCCEESCSS
T ss_pred cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECC-EEEEeeCCccCCCC
Confidence 9999999999998763 3333 55542 6766778884 79999998765555
No 130
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=42.46 E-value=5.9 Score=40.04 Aligned_cols=24 Identities=17% Similarity=0.295 Sum_probs=21.2
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|++|+|||+....
T Consensus 18 gl~~a~~l~~-~g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 18 ECILSGIMSV-NGKKVLHMDRNPYY 41 (433)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCcEEEEecCCCc
Confidence 5789999999 89999999998654
No 131
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=42.09 E-value=6.3 Score=39.24 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=20.6
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+...
T Consensus 17 Gl~~A~~La~-~G~~V~v~E~~~~ 39 (421)
T 3nix_A 17 GTVAASLVNK-SGFKVKIVEKQKF 39 (421)
T ss_dssp HHHHHHHHHT-TTCCEEEECSSCS
T ss_pred HHHHHHHHHh-CCCCEEEEeCCCC
Confidence 6889999999 8999999999863
No 132
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=41.95 E-value=6.1 Score=39.57 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=20.9
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|.+|+|||+.+..
T Consensus 41 Gl~aA~~l~~-~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 41 GSVLAERLAS-SGQRVLIVDRRPHI 64 (397)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCceEEEeccCCC
Confidence 6789999999 79999999998654
No 133
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=41.78 E-value=6.8 Score=39.83 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=33.0
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+.+|++++.|++|..++ ++ ..|++.......+++|+ .||+|+++-...+||
T Consensus 249 g~~i~~~~~V~~i~~~~--~~-~~v~~~~~~~g~~~~ad-~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 249 GDAAHVGARVEGLARED--GG-WRLIIEEHGRRAELSVA-QVVLAAPAHATAKLL 299 (478)
T ss_dssp GGGEESSEEEEEEECC----C-CEEEEEETTEEEEEECS-EEEECSCHHHHHHHH
T ss_pred hhhEEcCCEEEEEEecC--Ce-EEEEEeecCCCceEEcC-EEEECCCHHHHHHHh
Confidence 35899999999998763 23 44555321111357784 699999876666655
No 134
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=41.63 E-value=5.1 Score=42.03 Aligned_cols=23 Identities=22% Similarity=0.391 Sum_probs=20.8
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||++..
T Consensus 119 GL~aA~~La~-~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 119 GLFAGLVLAQ-MGFNPIIVERGKE 141 (549)
T ss_dssp HHHHHHHHHH-TTCCCEEECSSCC
T ss_pred HHHHHHHHHH-CCCeEEEEEccCc
Confidence 6789999999 9999999999964
No 135
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=41.58 E-value=6.1 Score=41.54 Aligned_cols=22 Identities=18% Similarity=0.145 Sum_probs=20.2
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 30 Gl~~A~~La~-~G~~V~LlEk~d 51 (561)
T 3da1_A 30 GAGIALDAQV-RGIQTGLVEMND 51 (561)
T ss_dssp HHHHHHHHHT-TTCCEEEEESSS
T ss_pred HHHHHHHHHh-CCCcEEEEECCC
Confidence 6789999999 899999999984
No 136
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=41.38 E-value=18 Score=37.09 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=36.1
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
+|...+.+.+++|+.+ +|++|..++ ++++.+|+.. +|+ +++| +-||.|.|+
T Consensus 178 ~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~-~g~--~~~a-d~vV~A~G~ 228 (511)
T 2weu_A 178 YLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTK-QHG--EISG-DLFVDCTGF 228 (511)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEES-SSC--EEEC-SEEEECCGG
T ss_pred HHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEEC-CCC--EEEc-CEEEECCCc
Confidence 4434334468999999 999998854 3566777664 454 5788 579999996
No 137
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=41.25 E-value=6.6 Score=39.04 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=31.2
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEE-eCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
.+|+.++.|+.|..++ +. |.+. .+|+ ++++ +-||.|.|+--.-+-
T Consensus 140 ~~i~~~~~v~~i~~~~--~~---v~v~~~~g~--~~~a-~~vV~AdG~~S~vr~ 185 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDA--DG---VTVWFTDGS--SASG-DLLIAADGSHSALRP 185 (407)
T ss_dssp GGEEESCCEEEEEEET--TE---EEEEETTSC--EEEE-SEEEECCCTTCSSHH
T ss_pred CEEEECCEEEEEEecC--Cc---EEEEEcCCC--EEee-CEEEECCCcChHHHH
Confidence 7899999999998874 33 3443 3554 6778 578888887544443
No 138
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=41.19 E-value=6.2 Score=40.82 Aligned_cols=24 Identities=29% Similarity=0.351 Sum_probs=21.0
Q ss_pred CchhccccccCCC-CeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPD-WKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g-~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .| .+|+|||+....
T Consensus 20 GL~AA~~L~~-~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 20 GLKAASTLHQ-NGIQDCLVLEARDRV 44 (516)
T ss_dssp HHHHHHHHHH-TTCCSEEEECSSSSS
T ss_pred HHHHHHHHHh-cCCCCEEEEeCCCCC
Confidence 6789999999 89 999999998654
No 139
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=41.09 E-value=20 Score=36.47 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=40.8
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
..+++.+++|++++.|.+|..+++ ++ ..|++.+ +++..++.+. .||+|.|..-...+|
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 235 ASMEERGIPFLRKTVPLSVEKQDD-GK-LLVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTT-SC-EEEEEEETTTCCEEEEEES-EEEECSCEEECCGGG
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCC-Cc-EEEEEecCCCCceeEEEcC-EEEECcccccCcCcC
Confidence 334567899999999999986532 33 3466664 3556778884 799999976555554
No 140
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=41.05 E-value=54 Score=37.04 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=42.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-----C-------CeEEEEEecceEEEecCCc-CcHHHHHH-cCC
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-----N-------NKKRVVYAKKEVVLSAGAF-FSPHLLLL-SGI 259 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-----~-------g~~~~v~a~keVIlaaGai-~tp~lLl~-SGI 259 (517)
..++++++++.+.+|..+ ++++++|++.+ + |...++.+ ..||+|.|.. .++.|+.. +||
T Consensus 382 ~~Gv~~~~~~~~~~i~~~--~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~a-D~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 382 EEKCEFLPFLSPRKVIVK--GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKA-DVVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HTTCEEECSEEEEEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEC-SEEEECSCEECCCHHHHHHTTTS
T ss_pred HcCCEEEeCCCceEEEcc--CCeEEEEEEEEeEEcCCCCcccCCCceEEEEC-CEEEECCCCCCCchhhhhcccCc
Confidence 468999999999999765 46888888752 2 33457888 5799999985 45666554 454
No 141
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=40.33 E-value=7.1 Score=36.81 Aligned_cols=24 Identities=21% Similarity=0.428 Sum_probs=20.2
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++.+|.+|+|||+.+.
T Consensus 51 Gl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 51 GLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp HHHHHHHHHTSTTSCEEEEESSSS
T ss_pred HHHHHHHHHHcCCCeEEEEECCCC
Confidence 678999999823999999999864
No 142
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=40.03 E-value=19 Score=36.71 Aligned_cols=58 Identities=19% Similarity=0.185 Sum_probs=40.2
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
..+++.+++|++++.|++|.-+ +++..|.. ++. ++.+ +.||+|+|..-.+.+|..+|+
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~--~~~--~i~~-D~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 235 KEADKHHIEILTNENVKAFKGN---ERVEAVET--DKG--TYKA-DLVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHTTCEEECSCCEEEEEES---SBEEEEEE--TTE--EEEC-SEEEECSCEEESCGGGTTSCC
T ss_pred HHHHHcCcEEEcCCEEEEEEcC---CcEEEEEE--CCC--EEEc-CEEEECcCCCcChHHHHhCCc
Confidence 3345568999999999999754 34555543 343 5778 479999998766666655554
No 143
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=39.84 E-value=27 Score=35.59 Aligned_cols=57 Identities=12% Similarity=0.105 Sum_probs=40.1
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
..+++.+++|++++.|.+|.-.++ +. ..|++.+ +|+..++.+. .||+|.|..-...+
T Consensus 233 ~~l~~~gv~~~~~~~v~~i~~~~~-~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 233 EHMESHGTQFLKGCVPSHIKKLPT-NQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTT-SC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGG
T ss_pred HHHHHCCCEEEeCCEEEEEEEcCC-Cc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCc
Confidence 334567899999999999976432 32 3466654 3676778884 79999997655555
No 144
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=39.78 E-value=29 Score=35.43 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=42.1
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHH--HHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHL--LLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~l--Ll~SGI 259 (517)
..+++.+++|++++.|++|.-++ +. ..|.+.+ +|+..++.+ ..||+|.|..-...+ |..+||
T Consensus 247 ~~l~~~gV~v~~~~~v~~i~~~~--~~-~~v~~~~~~~g~~~~i~~-D~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 247 RMLTKQGIDFKLGAKVTGAVKSG--DG-AKVTFEPVKGGEATTLDA-EVVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET--TE-EEEEEEETTSCCCEEEEE-SEEEECCCCEECCTTSCHHHHTC
T ss_pred HHHHhCCCEEEECCeEEEEEEeC--CE-EEEEEEecCCCceEEEEc-CEEEEeeCCccCCCccCchhcCc
Confidence 33456789999999999998663 33 3355553 265567888 479999997655544 455554
No 145
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=39.58 E-value=8.6 Score=40.15 Aligned_cols=63 Identities=24% Similarity=0.285 Sum_probs=40.9
Q ss_pred hhcccCCCCCe--EEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcC
Q psy10349 191 FLRPIVERPNF--HVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSG 258 (517)
Q Consensus 191 ~l~~~~~~~nl--~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SG 258 (517)
|+....++.++ +|..++.|+++.+++++++ ..|+. .+|+ ++.+ +.||+|+|+...|++.-.-|
T Consensus 92 ~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~-~~V~~-~~G~--~i~a-d~lV~AtG~~s~p~~p~ipG 156 (540)
T 3gwf_A 92 YLEDVVDRFDLRRHFKFGTEVTSALYLDDENL-WEVTT-DHGE--VYRA-KYVVNAVGLLSAINFPNLPG 156 (540)
T ss_dssp HHHHHHHHTTCGGGEEESCCEEEEEEETTTTE-EEEEE-TTSC--EEEE-EEEEECCCSCCSBCCCCCTT
T ss_pred HHHHHHHHcCCcceeEeccEEEEEEEeCCCCE-EEEEE-cCCC--EEEe-CEEEECCcccccCCCCCCCC
Confidence 44333334455 7899999999998854332 23333 3455 4677 46999999988887655444
No 146
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.38 E-value=13 Score=37.67 Aligned_cols=58 Identities=16% Similarity=0.151 Sum_probs=39.4
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHH
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
+...+++.+++|++++.|.+|.-+. +. ..|++.. +|+..++.+ ..||+|+|..-...+
T Consensus 224 l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 224 FQRSLEKQGMKFKLKTKVVGVDTSG--DG-VKLTVEPSAGGEQTIIEA-DVVLVSAGRTPFTSG 283 (470)
T ss_dssp HHHHHHHSSCCEECSEEEEEEECSS--SS-EEEEEEESSSCCCEEEEE-SEEECCCCEEECCTT
T ss_pred HHHHHHHcCCEEEeCCEEEEEEEcC--Ce-EEEEEEecCCCcceEEEC-CEEEECCCCCcCCCC
Confidence 3333456689999999999997552 22 3455543 454456788 479999998766555
No 147
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=39.34 E-value=28 Score=35.17 Aligned_cols=24 Identities=25% Similarity=0.328 Sum_probs=21.1
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|.+|+|||+....
T Consensus 28 Gl~aa~~l~~-~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 28 GLAVAHHLRS-RGTDAVLLESSARL 51 (478)
T ss_dssp HHHHHHHHHT-TTCCEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCCEEEEEcCCCC
Confidence 6789999999 89999999998654
No 148
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=39.33 E-value=12 Score=37.84 Aligned_cols=24 Identities=25% Similarity=0.419 Sum_probs=20.9
Q ss_pred CchhccccccCCCC--eEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDW--KVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~--~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|. +|+|||+.+..
T Consensus 14 GLsaA~~L~~-~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 14 GLAASYHLSR-APCPPKVVLVESSERL 39 (477)
T ss_dssp HHHHHHHHHT-SSSCCEEEEECSSSSS
T ss_pred HHHHHHHHHh-CCCCCcEEEEeCCCCC
Confidence 6889999999 898 99999997643
No 149
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=38.96 E-value=7.7 Score=39.60 Aligned_cols=24 Identities=29% Similarity=0.386 Sum_probs=21.2
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+.+|.+|++ .|.+|+|||+.+..
T Consensus 23 Gl~aA~~L~~-~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 23 GLCSAFELQK-AGYKVTVLEARTRP 46 (489)
T ss_dssp HHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCCEEEEeccCCC
Confidence 6789999999 89999999998754
No 150
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=38.91 E-value=7.9 Score=39.22 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=20.6
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 18 Gl~aA~~La~-~G~~V~vlE~~~~ 40 (453)
T 3atr_A 18 GSSAAYQLSR-RGLKILLVDSKPW 40 (453)
T ss_dssp HHHHHHHHSS-SSCCEEEECSSCG
T ss_pred HHHHHHHHHH-CCCCEEEEECCCC
Confidence 6889999999 8999999999863
No 151
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=38.68 E-value=20 Score=36.35 Aligned_cols=56 Identities=16% Similarity=0.251 Sum_probs=37.8
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
..+++.+++|++++.|++|..++ +.+ .|.+.+.+...++.+ ..||+|.|..-....
T Consensus 229 ~~l~~~Gv~v~~~~~v~~i~~~~--~~~-~v~~~~~~g~~~~~~-D~vi~a~G~~p~~~~ 284 (476)
T 3lad_A 229 KILTKQGLKILLGARVTGTEVKN--KQV-TVKFVDAEGEKSQAF-DKLIVAVGRRPVTTD 284 (476)
T ss_dssp HHHHHTTEEEEETCEEEEEEECS--SCE-EEEEESSSEEEEEEE-SEEEECSCEEECCTT
T ss_pred HHHHhCCCEEEECCEEEEEEEcC--CEE-EEEEEeCCCcEEEEC-CEEEEeeCCcccCCC
Confidence 33456789999999999998663 333 355554222457788 479999997644443
No 152
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=38.20 E-value=9 Score=39.27 Aligned_cols=53 Identities=9% Similarity=0.058 Sum_probs=34.5
Q ss_pred eEEEcCcEEEEEEecCCCC---eEEEEEEEe-CCeE-EEEEecceEEEecCCcCcHHHH
Q psy10349 201 FHVMKKARVLKVLIDPNTK---RVFGVEFMK-NNKK-RVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~---~a~gV~~~~-~g~~-~~v~a~keVIlaaGai~tp~lL 254 (517)
.+|++++.|++|..++++. ....|.+.. +|.. .+++| +.||+++..-...+||
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~a-d~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESF-DAVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEE-SEEEECSCHHHHHTSE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEEC-CEEEECCCHHHHHHHh
Confidence 5799999999999874321 125666653 4532 35678 4699988865444443
No 153
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=38.19 E-value=19 Score=37.78 Aligned_cols=64 Identities=17% Similarity=0.063 Sum_probs=39.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
.|...+.+.+++|+.+++|+.|..++ ..++ |++...+...+++| +-||.|.|+- | .+-..-||.
T Consensus 153 ~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~-v~~~~~~G~~~~~a-~~vV~ADG~~-S-~vR~~lGi~ 216 (570)
T 3fmw_A 153 LLAEHAREAGAEIPRGHEVTRLRQDA--EAVE-VTVAGPSGPYPVRA-RYGVGCDGGR-S-TVRRLAADR 216 (570)
T ss_dssp HHHHHHHHHTEECCBSCEEEECCBCS--SCEE-EEEEETTEEEEEEE-SEEEECSCSS-C-HHHHHTTCC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcC--CeEE-EEEEeCCCcEEEEe-CEEEEcCCCC-c-hHHHHcCCC
Confidence 44333334589999999999998764 3333 55543322367888 5688888864 3 333333554
No 154
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=37.97 E-value=7.2 Score=39.27 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=20.7
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+++.
T Consensus 39 Gl~aA~~La~-~G~~V~llEk~~~ 61 (417)
T 3v76_A 39 GMMCAIEAGK-RGRRVLVIDHARA 61 (417)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHH-CCCcEEEEeCCCC
Confidence 6789999999 8999999999975
No 155
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=37.92 E-value=7.8 Score=38.67 Aligned_cols=41 Identities=7% Similarity=0.062 Sum_probs=28.6
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcC
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~ 249 (517)
.+|++++.|++|..++ ++++ |+. .+|+ ++| +.||+|+++-.
T Consensus 218 ~~v~~~~~V~~i~~~~--~~v~-v~~-~~g~---~~a-d~Vv~a~~~~~ 258 (424)
T 2b9w_A 218 HPAERNVDITRITRED--GKVH-IHT-TDWD---RES-DVLVLTVPLEK 258 (424)
T ss_dssp SCCBCSCCEEEEECCT--TCEE-EEE-SSCE---EEE-SEEEECSCHHH
T ss_pred ceEEcCCEEEEEEEEC--CEEE-EEE-CCCe---EEc-CEEEECCCHHH
Confidence 4689999999998763 3443 433 2443 678 46999999753
No 156
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=37.77 E-value=14 Score=37.21 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=39.5
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+...+++.+++|++++.|++|.-+ ++++++|.. +|+ ++.+ ..||+|+|..-+..+|
T Consensus 197 l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~--~g~--~i~~-D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 197 LAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL--DGK--EIKS-DIAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET--TSC--EEEE-SEEEECCCEEECCGGG
T ss_pred HHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe--CCC--EEEC-CEEEECcCCCCCHHHH
Confidence 333345678999999999999754 346666643 554 4677 4799999987666654
No 157
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=37.46 E-value=7.4 Score=38.90 Aligned_cols=23 Identities=17% Similarity=0.346 Sum_probs=20.6
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|.+|++ .|.+|+|||+++.
T Consensus 16 Gl~aA~~la~-~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 16 GLFCAAQLAK-LGKSVTVFDNGKK 38 (401)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHh-CCCCEEEEeCCCC
Confidence 6789999999 8999999999874
No 158
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=37.40 E-value=29 Score=36.04 Aligned_cols=51 Identities=24% Similarity=0.238 Sum_probs=35.5
Q ss_pred hhcccCCC-CCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 191 FLRPIVER-PNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 191 ~l~~~~~~-~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
+|...+.+ ++++|+.+ .|++|..++ ++++.+|+.. +|+ ++.| +.||+|+|+
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~-~G~--~i~a-d~vI~A~G~ 250 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTA-TGR--VFDA-DLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEET-TSC--EEEC-SEEEECCGG
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEEC-CCC--EEEC-CEEEECCCC
Confidence 44333333 48999999 999998764 3566777654 453 5778 579999995
No 159
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=37.23 E-value=7.5 Score=40.93 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=20.1
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 44 G~~~A~~La~-rG~~V~LlE~~~ 65 (571)
T 2rgh_A 44 GAGVAVQAAA-SGIKTGLIEMQD 65 (571)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSS
T ss_pred HHHHHHHHHH-CCCcEEEEeCCC
Confidence 6789999999 899999999985
No 160
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=37.13 E-value=13 Score=37.99 Aligned_cols=62 Identities=15% Similarity=0.157 Sum_probs=40.2
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH-HHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL-LLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l-Ll~SGI 259 (517)
..+++.+++|++++.|++|.-+++ +++..|++. +|+ .++.+ ..||+|+|..-...| |..+||
T Consensus 234 ~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~-~G~-~~i~~-D~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 234 DHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMN-DSK-SIDDV-DELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHHHHTCEEECSCCEEEEEECC--CCCEEEEET-TSC-EEEEE-SEEEECSCEEECCCSSGGGGTC
T ss_pred HHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEEC-CCc-EEEEc-CEEEECCCCCCccccChhhcCc
Confidence 334556899999999999976532 334455543 553 46778 479999997554444 444544
No 161
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=36.64 E-value=8.2 Score=41.21 Aligned_cols=25 Identities=8% Similarity=0.158 Sum_probs=22.5
Q ss_pred CchhccccccCCCCeEEEEcccCCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEEN 26 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~ 26 (517)
||++|..||+ .|++||+||+.+++-
T Consensus 20 ~~~~a~~~~~-~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 20 ESIIAAACSR-SGQRVLHVDSRSYYG 44 (650)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred HHHHHHHHHh-CCCEEEEEcCCCccc
Confidence 5899999999 899999999998763
No 162
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=36.62 E-value=8.2 Score=39.85 Aligned_cols=47 Identities=19% Similarity=0.127 Sum_probs=31.8
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
+.+|++++.|++|..++ ++++ |.+ .+|+ ++.| +.||+|++.-...+|
T Consensus 226 g~~i~~~~~V~~i~~~~--~~v~-v~~-~~g~--~~~a-d~VI~a~p~~~l~~l 272 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTR--ENVL-VET-LNHE--MYEA-KYVISAIPPTLGMKI 272 (520)
T ss_dssp GGGEESSCCEEEEECSS--SSEE-EEE-TTSC--EEEE-SEEEECSCGGGGGGS
T ss_pred CCcEEcCCeeEEEEECC--CeEE-EEE-CCCe--EEEe-CEEEECCCHHHHcce
Confidence 56899999999998763 3444 433 2454 4677 469999987554443
No 163
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=36.41 E-value=9.4 Score=37.82 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=20.8
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|.+|+|+|+.+..
T Consensus 15 Gl~~A~~l~~-~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 15 GAVIGRQLAE-KGHQVHIIDQRDHI 38 (384)
T ss_dssp HHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred HHHHHHHHHH-CCCcEEEEEecCCc
Confidence 6789999999 79999999997654
No 164
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=36.38 E-value=8.3 Score=38.83 Aligned_cols=46 Identities=17% Similarity=0.101 Sum_probs=31.1
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
+.+|++++.|++|..++ +.+ |.+..+++ +++| +.||+|++.-...+
T Consensus 226 g~~i~~~~~V~~i~~~~--~~~--v~v~~~~~--~~~a-d~VI~a~p~~~~~~ 271 (453)
T 2yg5_A 226 GDDVFLNAPVRTVKWNE--SGA--TVLADGDI--RVEA-SRVILAVPPNLYSR 271 (453)
T ss_dssp GGGEECSCCEEEEEEET--TEE--EEEETTTE--EEEE-EEEEECSCGGGGGG
T ss_pred CCcEEcCCceEEEEEeC--Cce--EEEEECCe--EEEc-CEEEEcCCHHHHhc
Confidence 46899999999998873 332 33333554 5678 56999998654433
No 165
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=36.27 E-value=24 Score=35.51 Aligned_cols=56 Identities=9% Similarity=0.042 Sum_probs=38.5
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
.+...+++.+++|++++.|++|..+ ++++ .|+. .++ ++.+ ..||+|.|..-...+|
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~-~~g---~i~a-D~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLET-SEQ---EISC-DSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEE-SSC---EEEE-SEEEECSCCBCCCSSC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEE-CCC---EEEe-CEEEECcCCCCChHHH
Confidence 3334445679999999999999765 3445 5544 233 6778 4699999977655544
No 166
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=36.19 E-value=22 Score=34.26 Aligned_cols=53 Identities=11% Similarity=0.258 Sum_probs=33.9
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp 251 (517)
|+....++.+++|+.++.|++|..+++ .. -|.. .++ ++.+ +.||||+|+...|
T Consensus 93 ~l~~~~~~~gv~i~~~~~v~~i~~~~~-~~--~v~~-~~g---~~~~-d~vVlAtG~~~~p 145 (369)
T 3d1c_A 93 YLQVVANHYELNIFENTVVTNISADDA-YY--TIAT-TTE---TYHA-DYIFVATGDYNFP 145 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSS-SE--EEEE-SSC---CEEE-EEEEECCCSTTSB
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEECCC-eE--EEEe-CCC---EEEe-CEEEECCCCCCcc
Confidence 443333445789999999999987632 21 1222 233 3667 4699999987555
No 167
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=36.19 E-value=8 Score=39.88 Aligned_cols=22 Identities=32% Similarity=0.425 Sum_probs=20.1
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 15 G~~~A~~La~-~G~~V~llE~~~ 36 (501)
T 2qcu_A 15 GAGIAADAAG-RGLSVLMLEAQD 36 (501)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSS
T ss_pred HHHHHHHHHh-CCCCEEEEECCC
Confidence 6789999999 899999999975
No 168
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=36.04 E-value=6.5 Score=39.21 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=19.7
Q ss_pred CchhccccccCC--CCeEEEEcccC
Q psy10349 1 GCVVTNRLTENP--DWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~--g~~VlvlEaG~ 23 (517)
|+.+|..|++ . |.+|+|||++.
T Consensus 48 Gls~A~~La~-~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 48 GAACAFYLRQ-LAPGRSLLLVEEGG 71 (405)
T ss_dssp HHHHHHHHHH-HCTTSCEEEECSSC
T ss_pred HHHHHHHHHh-cCCCCeEEEEeCCC
Confidence 6789999998 6 99999999985
No 169
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=35.99 E-value=5.5 Score=40.23 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=32.5
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
.+|.+++.|++|..+. +.+ .|++ .+|+ ++.|+ .||+|+.+-...+||
T Consensus 248 ~~i~~~~~V~~i~~~~--~~~-~v~~-~~g~--~~~ad-~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSG--SCY-SLEL-DNGV--TLDAD-SVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECS--SSE-EEEE-SSSC--EEEES-EEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcC--CeE-EEEE-CCCC--EEECC-EEEECCCHHHHHHHc
Confidence 7999999999998874 222 2333 3554 37784 699999876655554
No 170
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=35.85 E-value=9.5 Score=37.44 Aligned_cols=51 Identities=10% Similarity=-0.029 Sum_probs=33.8
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp 251 (517)
+|...+.+.+++|+.++.|++|.. ++ .|++. +|+ ++++ +-||.|.|+--..
T Consensus 112 ~L~~~~~~~gv~i~~~~~v~~i~~--~~----~v~~~-~g~--~~~a-d~vV~AdG~~s~v 162 (379)
T 3alj_A 112 ALVNRARALGVDISVNSEAVAADP--VG----RLTLQ-TGE--VLEA-DLIVGADGVGSKV 162 (379)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEET--TT----EEEET-TSC--EEEC-SEEEECCCTTCHH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEe--CC----EEEEC-CCC--EEEc-CEEEECCCccHHH
Confidence 343333345899999999999976 23 34443 454 5778 5799999975543
No 171
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=35.54 E-value=25 Score=36.27 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=35.4
Q ss_pred hhhcccCCC-CCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 190 AFLRPIVER-PNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 190 ~~l~~~~~~-~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
.+|...+.+ .+++|+.+ +|+.|..+++ +.+++|+.. +|. +++| +-||.|.|+
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~-~g~--~i~a-d~vV~AdG~ 231 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITK-QNG--EISG-QLFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEES-SSC--EEEC-SEEEECSGG
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEEC-CCC--EEEc-CEEEECCCc
Confidence 344443344 68999999 5999988643 456666654 444 3788 579999996
No 172
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=35.51 E-value=26 Score=34.81 Aligned_cols=23 Identities=43% Similarity=0.592 Sum_probs=20.3
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+++|.+|++ .|.+|+|||+.+.
T Consensus 13 Gl~aA~~L~~-~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 13 GLKAARDLTN-AGKKVLLLEGGER 35 (431)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHH-cCCeEEEEecCCC
Confidence 6789999999 8999999999654
No 173
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=35.40 E-value=9.1 Score=37.83 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=20.7
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 18 Gl~~A~~L~~-~G~~V~viE~~~~ 40 (399)
T 2x3n_A 18 GAMLAYLLGR-QGHRVVVVEQARR 40 (399)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSCC
T ss_pred HHHHHHHHHh-CCCcEEEEeCCCC
Confidence 6889999999 8999999999864
No 174
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=35.37 E-value=8.3 Score=38.81 Aligned_cols=22 Identities=18% Similarity=0.117 Sum_probs=20.3
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+++|..|++ .|.+|+|||+..
T Consensus 34 Gl~~A~~La~-~G~~V~viE~~~ 55 (430)
T 3ihm_A 34 GLHLGLFLRQ-HDVDVTVYTDRK 55 (430)
T ss_dssp HHHHHHHHHH-TTCEEEEEESCC
T ss_pred HHHHHHHHHH-CCCeEEEEcCCC
Confidence 6889999999 899999999985
No 175
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=35.16 E-value=51 Score=37.01 Aligned_cols=60 Identities=12% Similarity=0.043 Sum_probs=45.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe------CCeEEEEEecceEEEecCCcCcHHHHHHcC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK------NNKKRVVYAKKEVVLSAGAFFSPHLLLLSG 258 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~------~g~~~~v~a~keVIlaaGai~tp~lLl~SG 258 (517)
++.+++|++++.|++|.-++ ++++.+|++.+ +|+..++.+. .||+|.|..-+..||...|
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~-~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADE-NGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECT-TSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccC-CCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 35689999999999997631 24688898875 3555778884 7999999877777776554
No 176
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=35.12 E-value=8.5 Score=38.98 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=20.4
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 38 Gl~aA~~la~-~G~~V~llEk~~~ 60 (447)
T 2i0z_A 38 GLMAAIGAAE-EGANVLLLDKGNK 60 (447)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSS
T ss_pred HHHHHHHHHH-CCCCEEEEECCCC
Confidence 6789999999 8999999999864
No 177
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=34.82 E-value=5.6 Score=38.62 Aligned_cols=22 Identities=9% Similarity=-0.017 Sum_probs=19.3
Q ss_pred CchhccccccCCC------CeEEEEcccC
Q psy10349 1 GCVVTNRLTENPD------WKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g------~~VlvlEaG~ 23 (517)
|+.+|..|++ .| .+|+|||++.
T Consensus 12 Gls~A~~La~-~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 12 GLSTALCIHE-RYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp HHHHHHHHHH-HHTTTSSSCEEEEEESSC
T ss_pred HHHHHHHHHH-hccccCCCceEEEEECCC
Confidence 6789999999 66 8999999985
No 178
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=34.76 E-value=20 Score=36.70 Aligned_cols=53 Identities=15% Similarity=0.210 Sum_probs=36.2
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
..+++.+++|++++.|++|.-+++ ....|++. +|+ ++.+ ..||+|+|..-...
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~--~~~~v~~~-~G~--~i~~-D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTD--GSKHVTFE-SGK--TLDV-DVVMMAIGRIPRTN 295 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTT--SCEEEEET-TSC--EEEE-SEEEECSCEEECCG
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCC--ceEEEEEC-CCc--EEEc-CEEEECCCCccccc
Confidence 334567899999999999976532 23345443 554 5778 47999999765444
No 179
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=34.73 E-value=8.6 Score=39.31 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=32.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
++.|++|++++.|++|..++ +.+ .|++ .+|+ +++| +.||+|+|.-...+
T Consensus 267 ~~g~~~i~~~~~V~~i~~~~--~~v-~v~~-~~g~--~~~a-d~vI~a~~~~~l~~ 315 (495)
T 2vvm_A 267 GTGRLGYVFGCPVRSVVNER--DAA-RVTA-RDGR--EFVA-KRVVCTIPLNVLST 315 (495)
T ss_dssp TTTCEEEESSCCEEEEEECS--SSE-EEEE-TTCC--EEEE-EEEEECCCGGGGGG
T ss_pred hcCceEEEeCCEEEEEEEcC--CEE-EEEE-CCCC--EEEc-CEEEECCCHHHHhh
Confidence 33349999999999998763 222 2332 2454 4678 46999999644443
No 180
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=34.65 E-value=20 Score=35.71 Aligned_cols=56 Identities=16% Similarity=0.135 Sum_probs=40.8
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
..+++.+++|++++.|++|. + + +|++. +|+ ++.+ ..||+|+|..-...+|..+|+-
T Consensus 195 ~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~-~g~--~i~~-D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 195 RYHAAQGVDLRFERSVTGSV-D--G----VVLLD-DGT--RIAA-DMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHTTCEEEESCCEEEEE-T--T----EEEET-TSC--EEEC-SEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHcCcEEEeCCEEEEEE-C--C----EEEEC-CCC--EEEc-CEEEECcCCCccHHHHHhCCCC
Confidence 33456789999999999997 4 3 45443 454 4677 5799999988666788777764
No 181
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=34.55 E-value=11 Score=37.41 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=28.3
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCc
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai 248 (517)
.+|+.+++|++|..++ +.++ |++ .+|+ ++++ +-||.|.|+-
T Consensus 141 ~~i~~~~~v~~i~~~~--~~v~-v~~-~~g~--~~~a-d~vV~AdG~~ 181 (398)
T 2xdo_A 141 DTVIWDRKLVMLEPGK--KKWT-LTF-ENKP--SETA-DLVILANGGM 181 (398)
T ss_dssp TSEEESCCEEEEEECS--SSEE-EEE-TTSC--CEEE-SEEEECSCTT
T ss_pred CEEEECCEEEEEEECC--CEEE-EEE-CCCc--EEec-CEEEECCCcc
Confidence 5789999999998764 2222 333 3454 4678 5799999964
No 182
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=34.04 E-value=10 Score=39.73 Aligned_cols=64 Identities=20% Similarity=0.365 Sum_probs=41.5
Q ss_pred hhcccCCCCCe--EEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 191 FLRPIVERPNF--HVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 191 ~l~~~~~~~nl--~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
|+....++.++ +|..++.|+++.++++.++ ..|+. .+|+ ++.+ +.||+|+|....|++.-..|+
T Consensus 104 yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~-w~V~~-~~G~--~i~a-d~lV~AtG~~s~p~~p~ipG~ 169 (549)
T 4ap3_A 104 YLEHVADRFDLRRDIRFDTRVTSAVLDEEGLR-WTVRT-DRGD--EVSA-RFLVVAAGPLSNANTPAFDGL 169 (549)
T ss_dssp HHHHHHHHTTCGGGEECSCCEEEEEEETTTTE-EEEEE-TTCC--EEEE-EEEEECCCSEEECCCCCCTTG
T ss_pred HHHHHHHHcCCCccEEECCEEEEEEEcCCCCE-EEEEE-CCCC--EEEe-CEEEECcCCCCCCCCCCCCCc
Confidence 44443344455 7889999999998854332 23333 3455 4677 469999998888876655553
No 183
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=33.81 E-value=11 Score=37.41 Aligned_cols=23 Identities=35% Similarity=0.471 Sum_probs=20.3
Q ss_pred CchhccccccCCCCeEEEEccc-CC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAG-DE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG-~~ 24 (517)
|+++|.+|++ .|.+|+|||+. ..
T Consensus 56 GL~aA~~L~~-~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 56 GLVAGDLLTR-AGHDVTILEANANR 79 (376)
T ss_dssp HHHHHHHHHH-TSCEEEEECSCSSC
T ss_pred HHHHHHHHHH-CCCcEEEEeccccc
Confidence 6789999999 89999999998 43
No 184
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=32.94 E-value=51 Score=30.92 Aligned_cols=60 Identities=22% Similarity=0.259 Sum_probs=37.1
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcC-cHHHHHHc
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFF-SPHLLLLS 257 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~-tp~lLl~S 257 (517)
++....++.++++++++.|++|..+.+ + ...|+. .+++ +.+ +.||||.|+-. .|+.+-..
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~~i~~~~~-~-~~~v~~-~~g~---~~~-d~vVlAtG~~~~~p~~~~~~ 132 (332)
T 3lzw_A 72 NLKEQMAKFDQTICLEQAVESVEKQAD-G-VFKLVT-NEET---HYS-KTVIITAGNGAFKPRKLELE 132 (332)
T ss_dssp HHHHHHTTSCCEEECSCCEEEEEECTT-S-CEEEEE-SSEE---EEE-EEEEECCTTSCCEECCCCCT
T ss_pred HHHHHHHHhCCcEEccCEEEEEEECCC-C-cEEEEE-CCCE---EEe-CEEEECCCCCcCCCCCCCCC
Confidence 444444556899999999999987742 1 112222 2332 667 46999999843 55544333
No 185
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=32.63 E-value=37 Score=35.22 Aligned_cols=64 Identities=9% Similarity=0.144 Sum_probs=42.2
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecC-----------------CCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDP-----------------NTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~-----------------~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
++...+++.+++|++++.|.+|..+. .+++++ |.+ .+|+ ++.+ ..||+|.|..-.+.+
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~-~~g~--~i~~-D~vi~a~G~~p~~~l 271 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTL-SNGE--LLET-DLLIMAIGVRPETQL 271 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEE-TTSC--EEEE-SEEEECSCEEECCHH
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEE-cCCC--EEEc-CEEEECcCCccchHH
Confidence 33333456789999999999997631 123332 222 3454 5778 479999998877677
Q ss_pred HHHcCC
Q psy10349 254 LLLSGI 259 (517)
Q Consensus 254 Ll~SGI 259 (517)
|..+||
T Consensus 272 ~~~~g~ 277 (565)
T 3ntd_A 272 ARDAGL 277 (565)
T ss_dssp HHHHTC
T ss_pred HHhCCc
Confidence 766665
No 186
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=32.37 E-value=20 Score=36.67 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=35.9
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
..+++.+++|++++.|++|..+++ + ...|++. +|+ ++.+ ..||+|+|..-...
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~-~-~~~v~~~-~G~--~i~~-D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNAD-G-TRHVVFE-SGA--EADY-DVVMLAIGRVPRSQ 291 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTT-S-CEEEEET-TSC--EEEE-SEEEECSCEEESCT
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCC-C-EEEEEEC-CCc--EEEc-CEEEEccCCCcCcc
Confidence 334567999999999999976532 2 2344443 554 5778 47999999754443
No 187
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=32.29 E-value=12 Score=36.74 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=20.1
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+++|..|++ .|.+|+|+|+-+
T Consensus 13 Gl~~A~~L~~-~G~~v~v~Er~~ 34 (412)
T 4hb9_A 13 GTCLAHGLRK-HGIKVTIYERNS 34 (412)
T ss_dssp HHHHHHHHHH-TTCEEEEECSSC
T ss_pred HHHHHHHHHh-CCCCEEEEecCC
Confidence 6899999999 899999999865
No 188
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=32.23 E-value=95 Score=32.06 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=33.4
Q ss_pred EEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHH
Q psy10349 203 VMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 203 i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~ 252 (517)
|+.+++|+.|..++ +.++ |++.+ +|+..+++| +-||.|.|+--+-+
T Consensus 152 v~~~~~v~~~~~~~--~~v~-v~~~~~~~G~~~~i~a-~~vVgADG~~S~vR 199 (549)
T 2r0c_A 152 LRTRSRLDSFEQRD--DHVR-ATITDLRTGATRAVHA-RYLVACDGASSPTR 199 (549)
T ss_dssp EECSEEEEEEEECS--SCEE-EEEEETTTCCEEEEEE-EEEEECCCTTCHHH
T ss_pred cccCcEEEEEEEeC--CEEE-EEEEECCCCCEEEEEe-CEEEECCCCCcHHH
Confidence 99999999998774 3344 55554 366678999 57999999765443
No 189
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=32.19 E-value=11 Score=38.84 Aligned_cols=23 Identities=26% Similarity=0.316 Sum_probs=20.5
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 19 Gl~aA~~La~-~G~~V~liE~~~~ 41 (512)
T 3e1t_A 19 GSTLASFVAM-RGHRVLLLEREAF 41 (512)
T ss_dssp HHHHHHHHHT-TTCCEEEECSSCS
T ss_pred HHHHHHHHHh-CCCCEEEEccCCC
Confidence 6789999999 8999999999863
No 190
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=31.76 E-value=9.1 Score=40.41 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=20.6
Q ss_pred CchhccccccCC------CCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENP------DWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~------g~~VlvlEaG~~~ 25 (517)
|+.+|.+|++ . |.+|+|||+++..
T Consensus 47 GlaaA~~La~-~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 47 GLSAATRLKQ-LAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp HHHHHHHHHH-HHHHTTCCCCEEEECSSSST
T ss_pred HHHHHHHHHh-cccccCCCCcEEEEeCCCCC
Confidence 6788999998 6 9999999999653
No 191
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=31.72 E-value=34 Score=31.99 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=33.4
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCc
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai 248 (517)
++....++.+++++.+++|+.|..+.+++....|.. .+++ ++.+ +.||+|.|+-
T Consensus 61 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~-~~g~--~~~~-~~lv~AtG~~ 114 (310)
T 1fl2_A 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET-ASGA--VLKA-RSIIVATGAK 114 (310)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEE-TTSC--EEEE-EEEEECCCEE
T ss_pred HHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEE-CCCC--EEEe-CEEEECcCCC
Confidence 333333456899999999999976532122222332 2453 4667 4699999973
No 192
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=31.17 E-value=9.6 Score=34.62 Aligned_cols=22 Identities=23% Similarity=0.155 Sum_probs=19.7
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 15 Gl~aA~~la~-~g~~v~lie~~~ 36 (232)
T 2cul_A 15 GAETAFWLAQ-KGVRVGLLTQSL 36 (232)
T ss_dssp HHHHHHHHHH-TTCCEEEEESCG
T ss_pred HHHHHHHHHH-CCCCEEEEecCC
Confidence 6789999999 899999999984
No 193
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=30.94 E-value=10 Score=35.91 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=34.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
...+..+++++ |..+.-+ ++++++|++. +|+ ++.+ ..||+++|......+|...||
T Consensus 191 ~~~g~~~~~~~-v~~~~~~--~~~~~~v~~~-~g~--~i~~-~~~vi~~g~~~~~~~~~~~g~ 246 (304)
T 4fk1_A 191 SNKNIPVITES-IRTLQGE--GGYLKKVEFH-SGL--RIER-AGGFIVPTFFRPNQFIEQLGC 246 (304)
T ss_dssp HTTTCCEECSC-EEEEESG--GGCCCEEEET-TSC--EECC-CEEEECCEEECSSCHHHHTTC
T ss_pred hccceeEeeee-EEEeecC--CCeeeeeecc-ccc--eeee-cceeeeeccccCChhhhhcCe
Confidence 45678888775 5666544 4567777664 343 3445 358888876655456665554
No 194
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=30.92 E-value=44 Score=33.34 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=41.7
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++....++.++++++++.|++|. . ++ |.+.. +|...++.+ ..||+++|.-. +.++..||.
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~--~--~~---~~~~~~~g~~~~i~~-d~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIE--P--DK---VIYEDLNGNTHEVPA-KFTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEC--S--SE---EEEECTTSCEEEEEC-SEEEEECEEEC-CHHHHTTCT
T ss_pred HHHHHHHhCCeEEEeCceEEEEe--C--Cc---eEEEeeCCCceEeec-ceEEEeccCCC-chHHHhccc
Confidence 45444556799999999999983 2 22 34443 567778888 57999998654 467777763
No 195
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=30.91 E-value=15 Score=38.42 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=34.2
Q ss_pred EEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 202 HVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 202 ~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
+|..++.|+++.+++++++ .-|+. .+|+ ++++ +.||+|+|....|++.-..|+
T Consensus 105 ~i~~~~~V~~~~~~~~~~~-w~V~~-~~G~--~~~a-d~lV~AtG~~s~p~~p~ipG~ 157 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRL-WEVTL-DNEE--VVTC-RFLISATGPLSASRMPDIKGI 157 (545)
T ss_dssp GEECSCCEEEEEEEGGGTE-EEEEE-TTTE--EEEE-EEEEECCCSCBC---CCCTTG
T ss_pred cEEECCEEEEEEEeCCCCE-EEEEE-CCCC--EEEe-CEEEECcCCCCCCcCCCCCCc
Confidence 6888999999998753232 22332 3565 5677 469999999989987655553
No 196
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=30.69 E-value=19 Score=36.69 Aligned_cols=59 Identities=19% Similarity=0.225 Sum_probs=39.2
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH--HHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL--LLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l--Ll~SGI 259 (517)
..+++.+++|++++.|++|..++ +++ .|++ .+|+ ++.+ +.||+|+|..-...+ |...||
T Consensus 240 ~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~-~~g~--~i~a-D~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 240 DAMVAKGISIIYEATVSQVQSTE--NCY-NVVL-TNGQ--TICA-DRVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHHHHTCEEESSCCEEEEEECS--SSE-EEEE-TTSC--EEEE-SEEEECCCEEECCTTCCHHHHTC
T ss_pred HHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEE-CCCc--EEEc-CEEEEeeCCCcCCCCCChhhcCc
Confidence 33445689999999999998763 333 4444 2453 5677 479999997655554 444554
No 197
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=30.63 E-value=27 Score=36.19 Aligned_cols=52 Identities=12% Similarity=0.127 Sum_probs=35.7
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCc
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAF 248 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai 248 (517)
+|...+.+.+++++.+ +|+.|..++ ++.+.+|... +|+ +++| +-||+|.|+-
T Consensus 170 ~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~-~g~--~i~a-d~vV~A~G~~ 221 (538)
T 2aqj_A 170 FLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTK-EGR--TLEA-DLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEET-TSC--EECC-SEEEECCGGG
T ss_pred HHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEEC-CCc--EEEe-CEEEECCCCc
Confidence 4434334468999999 899998864 3456666653 453 5778 5799999963
No 198
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=30.49 E-value=13 Score=36.85 Aligned_cols=50 Identities=14% Similarity=0.038 Sum_probs=33.7
Q ss_pred CCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 199 PNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 199 ~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
++++|+.+++|++|..++ +.++ |++ .+|+ ++++ +-||.|.|+--..+=++
T Consensus 110 ~~~~i~~~~~v~~i~~~~--~~v~-v~~-~~g~--~~~a-d~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDS--ETVQ-MRF-SDGT--KAEA-NWVIGADGGASVVRKRL 159 (397)
T ss_dssp CSTTEETTCCEEEEEECS--SCEE-EEE-TTSC--EEEE-SEEEECCCTTCHHHHHH
T ss_pred CCcEEEcCCEEEEEEecC--CEEE-EEE-CCCC--EEEC-CEEEECCCcchhHHHHh
Confidence 478999999999998764 3332 333 3454 4778 57999999755544443
No 199
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=29.96 E-value=10 Score=35.88 Aligned_cols=60 Identities=13% Similarity=0.056 Sum_probs=37.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEE--eCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFM--KNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~--~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
...++.+.....+..+...+ .....+... ..+....+.+ ..|+++.|..-...++...|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-d~v~~~~g~~~~~~~~~~~g~ 253 (312)
T 4gcm_A 192 KNDKIDFIWSHTLKSINEKD--GKVGSVTLTSTKDGSEETHEA-DGVFIYIGMKPLTAPFKDLGI 253 (312)
T ss_dssp HCTTEEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGGGGTC
T ss_pred HhcCcceeeecceeeeeccc--cccccceeeeecCCceeEEee-eeEEeecCCCcCchhHHhcce
Confidence 35567777777777776552 333333333 3556677777 468888887766666555543
No 200
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=29.59 E-value=13 Score=39.15 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=21.3
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|..|++ .|.+|+|||+.+..
T Consensus 61 GL~~A~~La~-~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 61 GLMLAGELRA-GGVGALVLEKLVEP 84 (570)
T ss_dssp HHHHHHHHHH-TTCCEEEEBSCSSC
T ss_pred HHHHHHHHHH-CCCCEEEEcCCCCC
Confidence 6889999999 89999999998654
No 201
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=29.49 E-value=31 Score=34.90 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=38.2
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcCcHHH-HHHcCC
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPHL-LLLSGI 259 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~l-Ll~SGI 259 (517)
++|++++.|++|.-+++ +.+. |++.. +|+..++.+. .||+|.|..-...| |..+|+
T Consensus 226 v~i~~~~~v~~i~~~~~-~~v~-v~~~~~~G~~~~i~~D-~vi~a~G~~p~~~l~l~~~gl 283 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKD-DEYE-VIYSTKDGSKKSIFTN-SVVLAAGRRPVIPEGAREIGL 283 (466)
T ss_dssp CCEECSCCEEEEEEEET-TEEE-EEECCTTSCCEEEEES-CEEECCCEEECCCTTTGGGTC
T ss_pred EEEEECCEEEEEEEcCC-CcEE-EEEEecCCceEEEEcC-EEEECcCCCcccccchhhcCc
Confidence 89999999999976521 3332 55543 5766778885 69999997655444 444554
No 202
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=29.34 E-value=9.7 Score=37.51 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=20.1
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+++|..|++ .|.+|+|||+.+
T Consensus 14 Gl~~A~~L~~-~G~~v~v~E~~~ 35 (394)
T 1k0i_A 14 GLLLGQLLHK-AGIDNVILERQT 35 (394)
T ss_dssp HHHHHHHHHH-HTCCEEEECSSC
T ss_pred HHHHHHHHHH-CCCCEEEEeCCC
Confidence 6889999999 899999999976
No 203
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=29.34 E-value=25 Score=36.49 Aligned_cols=54 Identities=17% Similarity=0.268 Sum_probs=36.2
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
.+|..+++|+++.+++++++. .|+. .+|+ ++++ +.||+|+|+...|++...-|+
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w-~V~~-~~G~--~~~a-d~vV~AtG~~s~p~~p~i~G~ 164 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTW-TVDT-NHGD--RIRA-RYLIMASGQLSVPQLPNFPGL 164 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEE-EEEE-TTCC--EEEE-EEEEECCCSCCCCCCCCCTTG
T ss_pred ceEEcCcEEEEEEEcCCCCeE-EEEE-CCCC--EEEe-CEEEECcCCCCCCCCCCCCCc
Confidence 467788999999987543332 2433 3454 4678 469999999888876544443
No 204
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=28.78 E-value=27 Score=33.51 Aligned_cols=48 Identities=15% Similarity=0.022 Sum_probs=32.2
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+.+|++++.|++|..++ +.++ |.+ .+|+. +.+ +.||+|+.+-.+.+||
T Consensus 123 g~~i~~~~~V~~i~~~~--~~~~-v~~-~~g~~--~~a-d~vV~A~p~~~~~~ll 170 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRD--DKWE-VSK-QTGSP--EQF-DLIVLTMPVPEILQLQ 170 (342)
T ss_dssp TCEEESSCCEEEEEECS--SSEE-EEE-SSSCC--EEE-SEEEECSCHHHHTTCB
T ss_pred CCEEEeCCEEEEEEEcC--CEEE-EEE-CCCCE--EEc-CEEEECCCHHHHHHHh
Confidence 68999999999998863 3332 333 24543 467 5699998765555554
No 205
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=28.51 E-value=45 Score=33.80 Aligned_cols=24 Identities=46% Similarity=0.541 Sum_probs=20.8
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+.+|.+|++ .|.+|+|||+.+..
T Consensus 51 Gl~aA~~l~~-~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 51 GLTATRDLTV-AGFKTLLLEARDRI 74 (495)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSBS
T ss_pred HHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 6789999999 89999999997643
No 206
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=28.32 E-value=15 Score=37.93 Aligned_cols=24 Identities=21% Similarity=0.183 Sum_probs=21.3
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+.+|..|++ .|.+|+|||+.+..
T Consensus 17 Gl~~A~~La~-~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 17 GLSTAMFLAR-QGVRVLVVERRPGL 40 (535)
T ss_dssp HHHHHHHHHT-TTCCEEEECSSSSC
T ss_pred HHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 6889999999 89999999998754
No 207
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=28.12 E-value=11 Score=35.59 Aligned_cols=22 Identities=14% Similarity=0.013 Sum_probs=0.0
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|.+|++ .|++|+|+|++.
T Consensus 16 Gl~AA~~la~-~g~~v~liE~~~ 37 (314)
T 4a5l_A 16 AHTAAIYLGR-SSLKPVMYEGFM 37 (314)
T ss_dssp HHHHHHHHHH-TTCCCEEECCSS
T ss_pred HHHHHHHHHH-CCCCEEEEecCC
No 208
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=27.48 E-value=13 Score=31.99 Aligned_cols=22 Identities=32% Similarity=0.443 Sum_probs=19.5
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||+++
T Consensus 13 Gl~~A~~l~~-~g~~v~lie~~~ 34 (180)
T 2ywl_A 13 GLSAALFLAR-AGLKVLVLDGGR 34 (180)
T ss_dssp HHHHHHHHHH-TTCCEEEEECSC
T ss_pred HHHHHHHHHH-CCCcEEEEeCCC
Confidence 5678999998 899999999986
No 209
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=27.41 E-value=12 Score=37.81 Aligned_cols=45 Identities=18% Similarity=0.159 Sum_probs=32.8
Q ss_pred eEEEcCcEEEEEEecCCCCeEEEEEEE-eCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 201 FHVMKKARVLKVLIDPNTKRVFGVEFM-KNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 201 l~i~~~~~V~ri~~~~~~~~a~gV~~~-~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
.+|.+++.|++|..+. +. |.+. .+| ++.|+ .||+|+++-...+||
T Consensus 249 ~~i~~~~~V~~i~~~~--~~---~~v~~~~g---~~~ad-~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 249 SEIRLETPLLAISRED--GR---YRLKTDHG---PEYAD-YVLLTIPHPQVVQLL 294 (475)
T ss_dssp CEEESSCCCCEEEEET--TE---EEEECTTC---CEEES-EEEECSCHHHHHHHC
T ss_pred CEEEcCCeeeEEEEeC--CE---EEEEECCC---eEECC-EEEECCCHHHHHHHc
Confidence 6899999999998773 33 3343 245 57884 699999987666664
No 210
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=27.41 E-value=16 Score=35.06 Aligned_cols=24 Identities=13% Similarity=0.256 Sum_probs=20.0
Q ss_pred CchhccccccC--CCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTEN--PDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~--~g~~VlvlEaG~~ 24 (517)
|+.+|..|++. .|.+|+|||+++.
T Consensus 13 Gl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 13 GSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp HHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred HHHHHHHHHhhccCCceEEEEECCCC
Confidence 67889999873 6899999999863
No 211
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=27.38 E-value=11 Score=36.80 Aligned_cols=24 Identities=29% Similarity=0.476 Sum_probs=20.2
Q ss_pred CchhccccccC-CCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTEN-PDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~-~g~~VlvlEaG~~ 24 (517)
|+.+|..|++. +|.+|+|||++..
T Consensus 91 GL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 91 GLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred HHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 57889999983 4999999999864
No 212
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=27.06 E-value=26 Score=35.87 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=36.4
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHH
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHL 253 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~l 253 (517)
+...+++.+++|++++.|++|.-+. +++ .|+. .+|+ ++.+ +.||+|+|..-...+
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v~~-~~g~--~i~a-D~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTG--AGV-LVTM-TDGR--TVEG-SHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECS--SSE-EEEE-TTSC--EEEE-SEEEECCCEEECCSS
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EEEE-CCCc--EEEc-CEEEECCCCCcCCCc
Confidence 3333456789999999999997652 332 2322 2443 4677 469999998755555
No 213
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=26.86 E-value=64 Score=32.25 Aligned_cols=46 Identities=22% Similarity=0.210 Sum_probs=32.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
+.+++++.++.|++|..+ . +...+.....+....+..+ .+|||.|+
T Consensus 69 ~~~i~~~~~~~V~~id~~--~-~~~~~~~~~~~~~~~~~yd-~lVIATGs 114 (437)
T 4eqs_A 69 RKQITVKTYHEVIAINDE--R-QTVSVLNRKTNEQFEESYD-KLILSPGA 114 (437)
T ss_dssp HHCCEEEETEEEEEEETT--T-TEEEEEETTTTEEEEEECS-EEEECCCE
T ss_pred hcCCEEEeCCeEEEEEcc--C-cEEEEEeccCCceEEEEcC-EEEECCCC
Confidence 458899999999999765 2 2323333345667778885 59999997
No 214
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=26.82 E-value=13 Score=36.42 Aligned_cols=24 Identities=29% Similarity=0.623 Sum_probs=20.5
Q ss_pred CchhccccccCC--CCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENP--DWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~--g~~VlvlEaG~~~ 25 (517)
|+.+|..|++ . |.+|+|||+.+..
T Consensus 12 Gl~~A~~L~~-~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 12 GLVFASQLKQ-ARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp HHHHHHHHHH-HCTTSEEEEECSSCTT
T ss_pred HHHHHHHHHh-cCCCCCEEEEECCCCC
Confidence 6789999998 5 9999999998643
No 215
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=26.79 E-value=41 Score=34.33 Aligned_cols=56 Identities=18% Similarity=0.089 Sum_probs=40.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++.+++|++++.|++|.-+ +++.+|+. .+| .++.+ +.||+|+|..-...||..+|+
T Consensus 268 ~~~GV~v~~~~~v~~i~~~---~~v~~v~~-~~g--~~i~a-D~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGN---EKVERVID-MNN--HEYKV-DALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHTCEEEECSSEEEEECS---SSCCEEEE-TTC--CEEEC-SEEEECCCEEECCHHHHHTTC
T ss_pred HhCCcEEEeCCeeEEEecC---CceEEEEe-CCC--eEEEe-CEEEECCCcCcCchHHHhcCC
Confidence 3458999999999999743 24555553 244 35677 579999998877778877765
No 216
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=26.67 E-value=23 Score=35.10 Aligned_cols=24 Identities=21% Similarity=0.216 Sum_probs=20.8
Q ss_pred CchhccccccCCC-CeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPD-WKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g-~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .| .+|+|||+.+..
T Consensus 18 Gl~aA~~L~~-~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 18 GLAAGMYLEQ-AGFHDYTILERTDHV 42 (424)
T ss_dssp HHHHHHHHHH-TTCCCEEEECSSSCS
T ss_pred HHHHHHHHHh-CCCCcEEEEECCCCC
Confidence 6789999999 89 899999997654
No 217
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=26.60 E-value=61 Score=32.65 Aligned_cols=50 Identities=14% Similarity=0.215 Sum_probs=32.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
++.+++++.++.|++|..+ ++. |.+.. +|...++.++ .+|||+|+ .|.++
T Consensus 77 ~~~gi~~~~~~~V~~id~~--~~~---v~~~~~~~g~~~~~~~d-~lviAtG~--~p~~p 128 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRA--AHT---VEIENLRTGERRTLKYD-KLVLALGS--KANRP 128 (472)
T ss_dssp ----CEEECSEEEEEEETT--TTE---EEEEETTTCCEEEEECS-EEEECCCE--EECCC
T ss_pred hhcCcEEEECCEEEEEECC--CCE---EEEeecCCCCEEEEECC-EEEEeCCC--CcCCC
Confidence 3568899999999999765 333 33332 4666778885 69999997 44443
No 218
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=26.59 E-value=41 Score=33.60 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=20.9
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|.+|++ .|.+|+|||+....
T Consensus 17 Gl~aA~~l~~-~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 17 GLAAATALRK-AGLSVAVIEARDRV 40 (453)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred HHHHHHHHHH-CCCcEEEEECCCCC
Confidence 6789999999 89999999998654
No 219
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=26.59 E-value=8.9 Score=38.63 Aligned_cols=21 Identities=29% Similarity=0.306 Sum_probs=18.8
Q ss_pred CchhccccccCCC-CeEEEEccc
Q psy10349 1 GCVVTNRLTENPD-WKVLLLEAG 22 (517)
Q Consensus 1 G~v~A~rLae~~g-~~VlvlEaG 22 (517)
|+.+|.+|++ .| .+|+|||+.
T Consensus 35 Gls~A~~La~-~G~~~V~vlE~~ 56 (448)
T 3axb_A 35 GLAAAYYLKV-WSGGSVLVVDAG 56 (448)
T ss_dssp HHHHHHHHHH-HHCSCEEEEESS
T ss_pred HHHHHHHHHh-CCCCcEEEEccC
Confidence 6789999999 78 999999993
No 220
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=26.55 E-value=42 Score=33.88 Aligned_cols=60 Identities=13% Similarity=0.103 Sum_probs=38.8
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH-H-HHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH-L-LLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~-l-Ll~SGI 259 (517)
..+++.+++|++++.|++|.-++ +. ..|++ .+|+. ++.+ ..||+|+|..-... | |..+|+
T Consensus 215 ~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~-~~G~~-~i~~-D~vv~a~G~~p~~~~l~~~~~g~ 276 (463)
T 2r9z_A 215 ENMHAQGIETHLEFAVAALERDA--QG-TTLVA-QDGTR-LEGF-DSVIWAVGRAPNTRDLGLEAAGI 276 (463)
T ss_dssp HHHHHTTCEEESSCCEEEEEEET--TE-EEEEE-TTCCE-EEEE-SEEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEE-eCCcE-EEEc-CEEEECCCCCcCCCCCCchhcCC
Confidence 33455689999999999997653 22 33443 35653 6778 46999999754443 3 444454
No 221
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=26.27 E-value=15 Score=36.54 Aligned_cols=51 Identities=14% Similarity=-0.007 Sum_probs=36.0
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
+.+|+.+++|++|.. + ++ ++ |.+.+ +|+..++++ +-||.|.|+--..+=++
T Consensus 123 ~~~v~~~~~v~~i~~-~-~~-v~-v~~~~~~~g~~~~~~a-d~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 123 QQAVRTGLGVERIEE-R-DG-RV-LIGARDGHGKPQALGA-DVLVGADGIHSAVRAHL 175 (410)
T ss_dssp TTSEEESEEEEEEEE-E-TT-EE-EEEEEETTSCEEEEEE-SEEEECCCTTCHHHHHH
T ss_pred CcEEEECCEEEEEec-C-Cc-cE-EEEecCCCCCceEEec-CEEEECCCccchhHHHh
Confidence 468999999999977 3 33 32 55554 476677889 57999999876665444
No 222
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=26.25 E-value=16 Score=38.62 Aligned_cols=23 Identities=22% Similarity=0.182 Sum_probs=20.5
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 35 Gl~aA~~Lar-~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 35 GSVAGLTLHK-LGHDVTIYERSAF 57 (591)
T ss_dssp HHHHHHHHHH-TTCEEEEECSSCS
T ss_pred HHHHHHHHHc-CCCCEEEEcCCCC
Confidence 6789999999 8999999999853
No 223
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=26.18 E-value=14 Score=37.78 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=28.2
Q ss_pred EEEcCcEEEEEEecCCCCeEEEEEEEeCCeE--EEEEecceEEEecCC
Q psy10349 202 HVMKKARVLKVLIDPNTKRVFGVEFMKNNKK--RVVYAKKEVVLSAGA 247 (517)
Q Consensus 202 ~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~--~~v~a~keVIlaaGa 247 (517)
+|++++.|++|..++ +.+ .|.+. +++. .+++|+ .||+|++.
T Consensus 254 ~i~~~~~V~~I~~~~--~~v-~v~~~-~~~~~~~~~~ad-~vI~t~p~ 296 (498)
T 2iid_A 254 KVHFNAQVIKIQQND--QKV-TVVYE-TLSKETPSVTAD-YVIVCTTS 296 (498)
T ss_dssp GEESSCEEEEEEECS--SCE-EEEEE-CSSSCCCEEEES-EEEECSCH
T ss_pred ccccCCEEEEEEECC--CeE-EEEEe-cCCcccceEEeC-EEEECCCh
Confidence 799999999998863 333 34444 3332 357884 69999984
No 224
>3c66_C PRE-mRNA polyadenylation factor FIP1; peptide-protein complex, mRNA processing, nucleus, RNA-bindi transferase, phosphoprotein; HET: MES; 2.60A {Saccharomyces cerevisiae}
Probab=26.07 E-value=11 Score=21.33 Aligned_cols=12 Identities=33% Similarity=0.484 Sum_probs=8.7
Q ss_pred eEEEecCCcCcHH
Q psy10349 240 EVVLSAGAFFSPH 252 (517)
Q Consensus 240 eVIlaaGai~tp~ 252 (517)
|||++.|+ .+.+
T Consensus 3 EfIIs~G~-D~tr 14 (26)
T 3c66_C 3 EVIISLGP-DPTR 14 (26)
T ss_dssp CEESCSSS-STTE
T ss_pred EEEEecCC-Cccc
Confidence 78999988 4443
No 225
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=25.98 E-value=15 Score=37.91 Aligned_cols=24 Identities=25% Similarity=0.296 Sum_probs=20.9
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|..|++ .|.+|+|||+.+..
T Consensus 23 Gl~~A~~La~-~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 23 GMMLAGELRL-AGVEVVVLERLVER 46 (500)
T ss_dssp HHHHHHHHHH-TTCCEEEEESCCC-
T ss_pred HHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 6889999999 89999999998654
No 226
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=25.69 E-value=28 Score=35.07 Aligned_cols=60 Identities=10% Similarity=0.163 Sum_probs=38.8
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHH-H-HHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPH-L-LLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~-l-Ll~SGI 259 (517)
..+++.+++|++++.|++|.-+++ + ...|++ .+|+ ++.+ +.||+|+|.--... | |..+||
T Consensus 216 ~~l~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~-~~g~--~i~~-D~vv~a~G~~p~~~~l~~~~~gl 277 (450)
T 1ges_A 216 EVMNAEGPQLHTNAIPKAVVKNTD-G-SLTLEL-EDGR--SETV-DCLIWAIGREPANDNINLEAAGV 277 (450)
T ss_dssp HHHHHHSCEEECSCCEEEEEECTT-S-CEEEEE-TTSC--EEEE-SEEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHCCCEEEeCCEEEEEEEeCC-c-EEEEEE-CCCc--EEEc-CEEEECCCCCcCCCCCCchhcCc
Confidence 334456899999999999976532 2 233443 3554 5777 57999999765443 3 455554
No 227
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=25.59 E-value=54 Score=33.13 Aligned_cols=57 Identities=11% Similarity=-0.007 Sum_probs=37.6
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeC--CeE--EEEEecceEEEecCCcCcHH
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN--NKK--RVVYAKKEVVLSAGAFFSPH 252 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~--g~~--~~v~a~keVIlaaGai~tp~ 252 (517)
..+++.+++|++++.|++|.-+.+ +....|.+.+. ++. .++.+ ..||+|.|..-...
T Consensus 236 ~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~g~~~~~-D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 236 EELENAGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDV-DCLLWAIGRVPNTK 296 (478)
T ss_dssp HHHHHTTCEEETTEEEEEEEECSS-SEEEEEEECCTTSCCEEEEEEEE-SEEEECSCEEESCT
T ss_pred HHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEccCCCCcccceEEEc-CEEEEeeccccCCC
Confidence 334567899999999999976532 32334555432 332 57788 47999999654443
No 228
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=25.55 E-value=29 Score=35.25 Aligned_cols=48 Identities=19% Similarity=0.074 Sum_probs=33.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-----------------CCeEEEEEecceEEEecCCcC
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-----------------NNKKRVVYAKKEVVLSAGAFF 249 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-----------------~g~~~~v~a~keVIlaaGai~ 249 (517)
..++++++++.+.+|.-+ +++++|++.+ +|...++.+ ..||+|.|.--
T Consensus 314 ~~Gv~~~~~~~~~~i~~~---g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~a-D~Vi~A~G~~p 378 (456)
T 2vdc_G 314 EEGVEFIWQAAPEGFTGD---TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQA-DLVIKALGFEP 378 (456)
T ss_dssp HTTCEEECCSSSCCEEEE---EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEEC-SEEEECSCEEC
T ss_pred HCCCEEEeCCCceEEeCC---CcEEEEEEEEEEecccCCcCCccccccCCcEEEEEC-CEEEECCCCCC
Confidence 458999999999988632 4566665531 345567888 47999999643
No 229
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.44 E-value=36 Score=34.78 Aligned_cols=55 Identities=13% Similarity=0.206 Sum_probs=36.6
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcH
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp 251 (517)
+...+++.+++|++++.|++|.-+++ +. ..|++ .+|+. .+.+ ..||+|+|..-..
T Consensus 223 l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~~v~~-~~g~~-~~~~-D~vi~a~G~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINIVTFADVVEIKKVSD-KN-LSIHL-SDGRI-YEHF-DHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESST-TC-EEEEE-TTSCE-EEEE-SEEEECCCBCCTT
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCC-ce-EEEEE-CCCcE-EEEC-CEEEECCCCCcCC
Confidence 33334567899999999999976532 22 33443 35654 4778 4799999976554
No 230
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=25.32 E-value=16 Score=37.63 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=21.3
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|..|++ .|.+|+|||+.+..
T Consensus 24 Gl~~A~~La~-~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 24 GLMLAGELRL-GGVDVMVLEQLPQR 47 (499)
T ss_dssp HHHHHHHHHH-TTCCEEEEESCSSC
T ss_pred HHHHHHHHHH-CCCCEEEEECCCCC
Confidence 6889999999 89999999998654
No 231
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=25.30 E-value=95 Score=31.30 Aligned_cols=51 Identities=18% Similarity=0.137 Sum_probs=39.0
Q ss_pred CCeEEEcCcEEEEEEecCCCC-eEEEEEEEe--------------CCeEEEEEecceEEEecCCcCcH
Q psy10349 199 PNFHVMKKARVLKVLIDPNTK-RVFGVEFMK--------------NNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 199 ~nl~i~~~~~V~ri~~~~~~~-~a~gV~~~~--------------~g~~~~v~a~keVIlaaGai~tp 251 (517)
.+++|++++.+.+|.-+++ + ++.+|++.+ +|+..++.+ ..||+|.|.--.+
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~-d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPC-GLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEEC-SEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEc-CEEEECCCCCCCC
Confidence 6799999999999975521 4 788888753 355567888 4799999977666
No 232
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=25.26 E-value=17 Score=37.90 Aligned_cols=24 Identities=21% Similarity=0.250 Sum_probs=21.2
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+++|..|++ .|.+|+|||+.+..
T Consensus 38 Gl~~A~~La~-~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 38 GMALALDLAH-RQVGHLVVEQTDGT 61 (549)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSCSC
T ss_pred HHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 6889999999 89999999998643
No 233
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=25.06 E-value=68 Score=30.21 Aligned_cols=53 Identities=17% Similarity=0.074 Sum_probs=33.4
Q ss_pred CCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-CCeEEEEEecceEEEecCCcC-cHHHHHHcC
Q psy10349 198 RPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-NNKKRVVYAKKEVVLSAGAFF-SPHLLLLSG 258 (517)
Q Consensus 198 ~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~g~~~~v~a~keVIlaaGai~-tp~lLl~SG 258 (517)
+.+++++.++.|++|..+. + .+++.. +++ ++.+ +.||+|.|+-. .|+.+-..|
T Consensus 77 ~~~~~~~~~~~v~~i~~~~--~---~~~v~~~~g~--~~~~-~~lv~AtG~~~~~p~~~~i~g 131 (335)
T 2zbw_A 77 PFNPVYSLGERAETLEREG--D---LFKVTTSQGN--AYTA-KAVIIAAGVGAFEPRRIGAPG 131 (335)
T ss_dssp GGCCEEEESCCEEEEEEET--T---EEEEEETTSC--EEEE-EEEEECCTTSEEEECCCCCTT
T ss_pred HcCCEEEeCCEEEEEEECC--C---EEEEEECCCC--EEEe-CEEEECCCCCCCCCCCCCCCC
Confidence 3467889999999998763 2 233332 443 4667 46999999843 454443333
No 234
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=24.71 E-value=15 Score=37.47 Aligned_cols=21 Identities=14% Similarity=0.026 Sum_probs=19.0
Q ss_pred CchhccccccCCCCeEEEEccc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAG 22 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG 22 (517)
|+.+|.+|++ .|.+|+|||++
T Consensus 38 Gl~aA~~la~-~G~~V~liEk~ 58 (484)
T 3o0h_A 38 GVRAARLAGA-LGKRVAIAEEY 58 (484)
T ss_dssp HHHHHHHHHH-TTCCEEEEESS
T ss_pred HHHHHHHHHh-CcCEEEEEeCC
Confidence 5789999999 89999999994
No 235
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=24.26 E-value=42 Score=35.07 Aligned_cols=57 Identities=12% Similarity=0.126 Sum_probs=40.5
Q ss_pred ccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 194 PIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 194 ~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
..+++.+++|++++.|++|.-+ +. +|.+. +|+ ++.+ ..||+|+|..-...+|..+||
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~-~g~--~i~~-D~Vi~a~G~~p~~~~l~~~g~ 292 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEEN--GA---VVRLK-SGS--VIQT-DMLILAIGVQPESSLAKGAGL 292 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEGG--GT---EEEET-TSC--EEEC-SEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHcCCEEEECCeEEEEecC--CC---EEEEC-CCC--EEEc-CEEEEccCCCCChHHHHhcCc
Confidence 3345678999999999999654 22 34443 454 4667 579999998777677777765
No 236
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=24.26 E-value=16 Score=37.31 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=29.4
Q ss_pred EEEcC--cEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHH
Q psy10349 202 HVMKK--ARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 202 ~i~~~--~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+|.++ +.|++|..+ +++ |.+ .+|+ ++.+ +.||+|+.+-...+||
T Consensus 230 ~i~~~~~~~V~~I~~~--~~~---v~~-~~G~--~~~a-d~VI~a~p~~~~~~ll 275 (484)
T 4dsg_A 230 KLTFNSGFQAIAIDAD--AKT---ITF-SNGE--VVSY-DYLISTVPFDNLLRMT 275 (484)
T ss_dssp GEEECGGGCEEEEETT--TTE---EEE-TTSC--EEEC-SEEEECSCHHHHHHHE
T ss_pred eEEECCCceeEEEEec--CCE---EEE-CCCC--EEEC-CEEEECCCHHHHHHHh
Confidence 78888 569999876 343 443 4564 4678 4699988765555554
No 237
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=24.08 E-value=16 Score=33.94 Aligned_cols=53 Identities=8% Similarity=0.076 Sum_probs=34.4
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
+++.+++|+. +.|.+|.-+ + +|++. +|+ ++.+ ..||+|.|..-+..||..+|+
T Consensus 184 l~~~gv~i~~-~~v~~i~~~--~----~v~~~-~g~--~~~~-D~vi~a~G~~p~~~~~~~~g~ 236 (297)
T 3fbs_A 184 LAARGVRVET-TRIREIAGH--A----DVVLA-DGR--SIAL-AGLFTQPKLRITVDWIEKLGC 236 (297)
T ss_dssp HHHTTCEEEC-SCEEEEETT--E----EEEET-TSC--EEEE-SEEEECCEEECCCSCHHHHTC
T ss_pred HHHCCcEEEc-ceeeeeecC--C----eEEeC-CCC--EEEE-EEEEEccCcccCchhHHhcCC
Confidence 3456899986 889888533 2 45443 454 4567 469999997755556665554
No 238
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=23.80 E-value=15 Score=35.52 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=19.7
Q ss_pred CchhccccccCC--CCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENP--DWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~--g~~VlvlEaG~~ 24 (517)
|+.+|..|++ . |.+|+|+|+++.
T Consensus 77 Gl~aA~~la~-~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 77 GLSAAYVIAK-NRPDLKVCIIESSVA 101 (326)
T ss_dssp HHHHHHHHHH-HCTTSCEEEECSSSS
T ss_pred HHHHHHHHHh-cCCCCeEEEEecCcc
Confidence 5788999998 5 999999999863
No 239
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=23.63 E-value=42 Score=35.96 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=37.4
Q ss_pred CCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHH
Q psy10349 196 VERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLL 255 (517)
Q Consensus 196 ~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl 255 (517)
+++.+++|++++.|++|.-+ + ..|+...++...++.+ ..||+|+|..-...|+.
T Consensus 577 l~~~GV~i~~~~~V~~i~~~--~---~~v~~~~~~~~~~i~a-D~VV~A~G~~p~~~l~~ 630 (690)
T 3k30_A 577 LIENGVARVTDHAVVAVGAG--G---VTVRDTYASIERELEC-DAVVMVTARLPREELYL 630 (690)
T ss_dssp HHHTTCEEEESEEEEEEETT--E---EEEEETTTCCEEEEEC-SEEEEESCEEECCHHHH
T ss_pred HHHCCCEEEcCcEEEEEECC--e---EEEEEccCCeEEEEEC-CEEEECCCCCCChHHHH
Confidence 35568999999999999632 1 1223223455667888 47999999876666554
No 240
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=23.36 E-value=19 Score=36.46 Aligned_cols=41 Identities=24% Similarity=0.220 Sum_probs=28.8
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
+.+|.+++.|++|..++ +.++ |.+ .+|+ +++| +.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~--~~v~-v~~-~~g~--~~~a-d~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSP--GGVT-VKT-EDNS--VYSA-DYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECS--SCEE-EEE-TTSC--EEEE-SEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcC--CcEE-EEE-CCCC--EEEc-CEEEEecCH
Confidence 56899999999998873 3343 433 2454 4678 469999984
No 241
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=23.36 E-value=19 Score=36.51 Aligned_cols=21 Identities=19% Similarity=-0.002 Sum_probs=18.8
Q ss_pred CchhccccccCCCCeEEEEccc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAG 22 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG 22 (517)
|+.+|.+|++ .|.+|+|||++
T Consensus 17 Gl~aA~~la~-~G~~V~liEk~ 37 (463)
T 4dna_A 17 GVRSGRLAAA-LGKKVAIAEEF 37 (463)
T ss_dssp HHHHHHHHHT-TTCCEEEEESS
T ss_pred HHHHHHHHHh-CCCEEEEEeCC
Confidence 5789999999 89999999994
No 242
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=22.88 E-value=20 Score=36.77 Aligned_cols=22 Identities=27% Similarity=0.300 Sum_probs=19.4
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|.+|++ .|.+|+|||++.
T Consensus 20 Gl~aA~~la~-~G~~V~liE~~~ 41 (492)
T 3ic9_A 20 GMGAYRAAKK-HTDKVVLIEGGA 41 (492)
T ss_dssp HHHHHHHHHT-TCSCEEEEESSC
T ss_pred HHHHHHHHHh-CCCcEEEEeCCC
Confidence 5688999999 899999999864
No 243
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=22.88 E-value=1.5e+02 Score=28.83 Aligned_cols=23 Identities=30% Similarity=0.339 Sum_probs=20.5
Q ss_pred CchhccccccCCCCe-EEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWK-VLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~-VlvlEaG~~ 24 (517)
|+++|..|++ .|.+ |+|||+.+.
T Consensus 16 Gl~~A~~L~~-~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 16 GLSCALALHQ-AGIGKVTLLESSSE 39 (410)
T ss_dssp HHHHHHHHHH-TTCSEEEEEESSSS
T ss_pred HHHHHHHHHh-CCCCeEEEEECCCC
Confidence 6889999999 8999 999999864
No 244
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=22.84 E-value=20 Score=36.76 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=20.2
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 104 Gl~aA~~La~-~G~~V~liEk~~~ 126 (497)
T 2bry_A 104 GLRAAVELAL-LGARVVLVEKRIK 126 (497)
T ss_dssp HHHHHHHHHH-TTCEEEEEESCSS
T ss_pred HHHHHHHHHH-CCCeEEEEEeccc
Confidence 6788999999 8999999999863
No 245
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=22.79 E-value=14 Score=37.64 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=19.9
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|.+|++ .|.+|+|||+++
T Consensus 15 Gl~aA~~la~-~G~~V~liEk~~ 36 (476)
T 3lad_A 15 GYVAAIKSAQ-LGLKTALIEKYK 36 (476)
T ss_dssp HHHHHHHHHH-HTCCEEEEECCB
T ss_pred HHHHHHHHHh-CCCEEEEEeCCC
Confidence 5789999999 899999999986
No 246
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=22.71 E-value=86 Score=31.47 Aligned_cols=24 Identities=38% Similarity=0.540 Sum_probs=20.6
Q ss_pred CchhccccccCCCC-eEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDW-KVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~-~VlvlEaG~~~ 25 (517)
|+.+|.+|++ .|. +|+|||+++..
T Consensus 16 g~~~a~~l~~-~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 16 GISAAKRLSE-AGITDLLILEATDHI 40 (472)
T ss_dssp HHHHHHHHHH-TTCCCEEEECSSSSS
T ss_pred HHHHHHHHHh-cCCCceEEEeCCCCC
Confidence 5788999999 898 89999998654
No 247
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.66 E-value=30 Score=33.78 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=40.0
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcCcHHHHHHcCCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIG 260 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~tp~lLl~SGIG 260 (517)
++...+++.+++|++++.|++|. . . +|++. +|+ +.+ ..||+|+|..-...||..+|+-
T Consensus 188 ~l~~~l~~~gV~i~~~~~v~~i~--~--~---~v~~~-~g~---i~~-D~vi~a~G~~p~~~ll~~~gl~ 245 (367)
T 1xhc_A 188 MIKDMLEETGVKFFLNSELLEAN--E--E---GVLTN-SGF---IEG-KVKICAIGIVPNVDLARRSGIH 245 (367)
T ss_dssp HHHHHHHHTTEEEECSCCEEEEC--S--S---EEEET-TEE---EEC-SCEEEECCEEECCHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEcCCEEEEEE--e--e---EEEEC-CCE---EEc-CEEEECcCCCcCHHHHHhCCCC
Confidence 34344456799999999999985 1 1 34442 443 777 4699999987666677777764
No 248
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=22.64 E-value=19 Score=34.31 Aligned_cols=23 Identities=17% Similarity=0.209 Sum_probs=20.3
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|..|++ .|.+|+|||+.+.
T Consensus 15 Gl~~A~~l~~-~g~~v~vie~~~~ 37 (357)
T 4a9w_A 15 GLSAGYFLRR-SGLSYVILDAEAS 37 (357)
T ss_dssp HHHHHHHHHH-SSCCEEEECCSSS
T ss_pred HHHHHHHHHH-CCCCEEEEECCCC
Confidence 5788999999 8999999999864
No 249
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=22.52 E-value=42 Score=33.76 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=20.0
Q ss_pred CchhccccccCCC--CeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPD--WKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g--~~VlvlEaG~~ 24 (517)
|+.+|.+|++ .| .+|+|||+.+.
T Consensus 16 Gl~~A~~L~~-~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 16 GLAAAYYAER-AFPDLNITLLEAGER 40 (475)
T ss_dssp HHHHHHHHHH-HCTTSEEEEECSSSS
T ss_pred HHHHHHHHHH-hCCCCCEEEEECCCC
Confidence 6789999999 77 99999999654
No 250
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=22.52 E-value=19 Score=36.78 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=20.0
Q ss_pred CchhccccccCCCCeEEEEcccCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDE 24 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~ 24 (517)
|+.+|.+|++ .|.+|+|||+.+.
T Consensus 37 Gl~aA~~la~-~G~~V~liEk~~~ 59 (491)
T 3urh_A 37 GYVCAIKAAQ-LGMKVAVVEKRST 59 (491)
T ss_dssp HHHHHHHHHH-TTCCEEEEESSSS
T ss_pred HHHHHHHHHH-CCCeEEEEecCCC
Confidence 5789999999 8999999998653
No 251
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=22.05 E-value=19 Score=34.12 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=18.6
Q ss_pred CchhccccccCCCCeEEEEccc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAG 22 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG 22 (517)
|+.+|..|++ .|.+|+|||+.
T Consensus 28 Gl~aA~~l~~-~g~~v~lie~~ 48 (319)
T 3cty_A 28 GFSAAVYAAR-SGFSVAILDKA 48 (319)
T ss_dssp HHHHHHHHHH-TTCCEEEEESS
T ss_pred HHHHHHHHHh-CCCcEEEEeCC
Confidence 5788999999 89999999984
No 252
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=21.77 E-value=44 Score=33.90 Aligned_cols=57 Identities=18% Similarity=0.098 Sum_probs=37.7
Q ss_pred hcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe-C--CeEEEEEecceEEEecCCcCcHHHH
Q psy10349 192 LRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK-N--NKKRVVYAKKEVVLSAGAFFSPHLL 254 (517)
Q Consensus 192 l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~-~--g~~~~v~a~keVIlaaGai~tp~lL 254 (517)
+...+++.+++|++++.|.+|.-++ + ...|++.+ + |+ ++.+ ..||+|+|..-...+|
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~--~-~~~v~~~~~~~~g~--~~~~-D~vv~a~G~~p~~~~l 291 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKE--D-GVYVTFEGANAPKE--PQRY-DAVLVAAGRAPNGKLI 291 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEET--T-EEEEEEESSSCCSS--CEEE-SCEEECCCEEECGGGT
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcC--C-eEEEEEeccCCCce--EEEc-CEEEECcCCCcCCCCC
Confidence 3333456789999999999997652 2 23455542 1 33 3557 4699999987666654
No 253
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=21.44 E-value=17 Score=34.42 Aligned_cols=22 Identities=18% Similarity=0.113 Sum_probs=19.7
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||+.+
T Consensus 34 Gl~aA~~l~~-~g~~v~vie~~~ 55 (338)
T 3itj_A 34 AHTAAIYLAR-AEIKPILYEGMM 55 (338)
T ss_dssp HHHHHHHHHH-TTCCCEEECCSS
T ss_pred HHHHHHHHHH-CCCCEEEEecCC
Confidence 5789999999 899999999975
No 254
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=21.43 E-value=49 Score=31.75 Aligned_cols=56 Identities=25% Similarity=0.226 Sum_probs=35.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCCcC-cHHHHHHcC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFF-SPHLLLLSG 258 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGai~-tp~lLl~SG 258 (517)
.+.+++++.++.|++|..+.+ +. .-|.. .+++ ++.+ +.||+|.|+-. .|+.+-..|
T Consensus 85 ~~~~~~~~~~~~v~~i~~~~~-~~-~~v~~-~~g~--~~~~-~~li~AtG~~~~~~~~~~i~g 141 (360)
T 3ab1_A 85 ERYNPDVVLNETVTKYTKLDD-GT-FETRT-NTGN--VYRS-RAVLIAAGLGAFEPRKLPQLG 141 (360)
T ss_dssp HTTCCEEECSCCEEEEEECTT-SC-EEEEE-TTSC--EEEE-EEEEECCTTCSCCBCCCGGGC
T ss_pred HHhCCEEEcCCEEEEEEECCC-ce-EEEEE-CCCc--EEEe-eEEEEccCCCcCCCCCCCCCC
Confidence 345789999999999987632 22 12222 2443 4667 46999999854 465554444
No 255
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=21.35 E-value=21 Score=35.82 Aligned_cols=24 Identities=21% Similarity=0.133 Sum_probs=21.2
Q ss_pred CchhccccccCCCCeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~ 25 (517)
|+.+|..|++ .|.+|+|+|..+..
T Consensus 13 G~~AA~~la~-~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 13 GSEAAWTLLR-LGVPVRLFEMRPKR 36 (443)
T ss_dssp HHHHHHHHHH-TTCCEEEECCTTTS
T ss_pred HHHHHHHHHH-CCCcEEEEeccCCc
Confidence 6789999999 89999999998743
No 256
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=21.20 E-value=1.5e+02 Score=31.44 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=30.0
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEe---CCeEEEEEecceEEEecC
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMK---NNKKRVVYAKKEVVLSAG 246 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~---~g~~~~v~a~keVIlaaG 246 (517)
+++|.+++.|++|..+++ . +-|++.+ .+...+++|+ .||++..
T Consensus 410 ~l~I~l~~~V~~I~~~~~--~-v~V~~~~~~~~~~~~~~~Ad-~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTAS--G-CEVIAVNTRSTSQTFIYKCD-AVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEETT--E-EEEEEEESSCTTCEEEEEES-EEEECCC
T ss_pred cCceecCCeEEEEEECCC--c-EEEEEeecccCCCCeEEEeC-EEEECCC
Confidence 578999999999998743 2 2344443 2334678894 6998876
No 257
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=21.12 E-value=51 Score=34.38 Aligned_cols=55 Identities=24% Similarity=0.327 Sum_probs=38.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCCeEEEEEEEe--CCeEEEEEecceEEEecCCcCcHHHHHHcCC
Q psy10349 197 ERPNFHVMKKARVLKVLIDPNTKRVFGVEFMK--NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGI 259 (517)
Q Consensus 197 ~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~--~g~~~~v~a~keVIlaaGai~tp~lLl~SGI 259 (517)
++.+++++.++.|++|..+ .+. |.+.. ++...++.++ .||||.|+ .|.++-.-|+
T Consensus 104 ~~~gi~v~~~~~V~~id~~--~~~---v~v~~~~~g~~~~~~~d-~lviAtG~--~p~~p~i~G~ 160 (588)
T 3ics_A 104 KRFNLDIRVLSEVVKINKE--EKT---ITIKNVTTNETYNEAYD-VLILSPGA--KPIVPSIPGI 160 (588)
T ss_dssp HHTTCEEECSEEEEEEETT--TTE---EEEEETTTCCEEEEECS-EEEECCCE--EECCCCCTTT
T ss_pred HhcCcEEEECCEEEEEECC--CCE---EEEeecCCCCEEEEeCC-EEEECCCC--CCCCCCCCCc
Confidence 4568999999999999776 333 33432 5676778885 69999997 4554433343
No 258
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=20.74 E-value=80 Score=31.35 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=20.7
Q ss_pred CchhccccccCCC------CeEEEEcccCCC
Q psy10349 1 GCVVTNRLTENPD------WKVLLLEAGDEE 25 (517)
Q Consensus 1 G~v~A~rLae~~g------~~VlvlEaG~~~ 25 (517)
|+.+|.+|++ .| .+|+|||+.+..
T Consensus 17 GLsaA~~L~~-~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 17 GLAAAFYMEK-EIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp HHHHHHHHHH-HHTTTTCSEEEEEECSSSSS
T ss_pred HHHHHHHHHH-hccccCCCCCEEEEECCCCC
Confidence 6789999999 77 999999998643
No 259
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=20.55 E-value=20 Score=33.67 Aligned_cols=21 Identities=10% Similarity=-0.083 Sum_probs=18.7
Q ss_pred CchhccccccCCCCeEEEEccc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAG 22 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG 22 (517)
|+.+|.+|++ .|.+|+|||+.
T Consensus 27 Gl~aA~~l~~-~g~~v~lie~~ 47 (323)
T 3f8d_A 27 AYGAALYSAR-YMLKTLVIGET 47 (323)
T ss_dssp HHHHHHHHHH-TTCCEEEEESS
T ss_pred HHHHHHHHHH-CCCcEEEEecc
Confidence 5788999999 89999999986
No 260
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=20.18 E-value=1.6e+02 Score=32.32 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=29.6
Q ss_pred CeEEEcCcEEEEEEecCCCCeEEEEEEEe---CCeEEEEEecceEEEecC
Q psy10349 200 NFHVMKKARVLKVLIDPNTKRVFGVEFMK---NNKKRVVYAKKEVVLSAG 246 (517)
Q Consensus 200 nl~i~~~~~V~ri~~~~~~~~a~gV~~~~---~g~~~~v~a~keVIlaaG 246 (517)
.+.|++++.|++|..+. ..+ .|++.+ .+...+++|+ .||++.-
T Consensus 581 ~l~I~Lnt~V~~I~~~~--~gV-~V~~~~~~~~~~g~~i~AD-~VIvTvP 626 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTA--SGC-EVIAVNTRSTSQTFIYKCD-AVLCTLP 626 (852)
T ss_dssp TCCEECSEEEEEEEEET--TEE-EEEEEESSSTTCEEEEEES-EEEECCC
T ss_pred CCCEEeCCeEEEEEEcC--CcE-EEEEeecccCCCCeEEECC-EEEECCC
Confidence 46899999999999874 332 355543 2334678895 6888864
No 261
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=20.13 E-value=21 Score=38.13 Aligned_cols=22 Identities=18% Similarity=0.095 Sum_probs=19.9
Q ss_pred CchhccccccCCCCeEEEEcccC
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGD 23 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~ 23 (517)
|+.+|..|++ .|.+|+|||++.
T Consensus 40 Gl~AAlaLAr-~G~kVlLIEk~~ 61 (651)
T 3ces_A 40 GTEAAMAAAR-MGQQTLLLTHNI 61 (651)
T ss_dssp HHHHHHHHHH-TTCCEEEEESCG
T ss_pred HHHHHHHHHh-CCCCEEEEeecc
Confidence 6789999999 899999999984
No 262
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=20.10 E-value=79 Score=32.47 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=34.0
Q ss_pred hhcccCCCCCeEEEcCcEEEEEEecCCCCeEEEEEEEeCCeEEEEEecceEEEecCC
Q psy10349 191 FLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGA 247 (517)
Q Consensus 191 ~l~~~~~~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~g~~~~v~a~keVIlaaGa 247 (517)
++....++.+++++.++.|++|..+.+++....|+. .+|. ++++ +.||+|+|+
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~-~~g~--~~~~-d~vVlAtG~ 324 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET-ASGA--VLKA-RSIIIATGA 324 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE-TTSC--EEEE-EEEEECCCE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE-CCCC--EEEc-CEEEECCCC
Confidence 444444567899999999999976532122223333 2454 4667 469999997
No 263
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=20.04 E-value=90 Score=31.44 Aligned_cols=49 Identities=14% Similarity=0.074 Sum_probs=37.4
Q ss_pred CCeEEEcCcEEEEEEecCCCCeEEEEEEEe---------------CCeEEEEEecceEEEecCCcCcH
Q psy10349 199 PNFHVMKKARVLKVLIDPNTKRVFGVEFMK---------------NNKKRVVYAKKEVVLSAGAFFSP 251 (517)
Q Consensus 199 ~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~---------------~g~~~~v~a~keVIlaaGai~tp 251 (517)
.+++|++++.+.+|.-+ +++.+|++.+ +|+..++.+ ..||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~-d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPA-QLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEEC-SEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEc-CEEEEccccccCC
Confidence 68999999999999743 3567777752 355567888 4799999987766
Done!