BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10357
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15170|ERF3A_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Homo sapiens GN=GSPT1 PE=1 SV=1
Length = 499
Score = 300 bits (769), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/223 (63%), Positives = 173/223 (77%), Gaps = 2/223 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G NLKE + C W+ G FIP++D LP+ NR +DGP +P+V+K+KDMGTVV+G
Sbjct: 262 SGLTGANLKEQ--SDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLG 319
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFV 149
K+ESG KGQ LV+MPN+ V V + SDD E +V PGEN+K++LKGIEE+++ PGF+
Sbjct: 320 KLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFI 379
Query: 150 LCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEK 209
LCDPNN + R FDAQIVI+EHKSIIC GY+AV+HIH EEV + ALICL+DKK+GEK
Sbjct: 380 LCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEK 439
Query: 210 SKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
SKTRPRFVKQDQ+ I RL AG ICL+ FK FPQMGRFTLRDE
Sbjct: 440 SKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDE 482
>sp|Q8R050|ERF3A_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
OS=Mus musculus GN=Gspt1 PE=1 SV=2
Length = 636
Score = 297 bits (761), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 141/223 (63%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G NLKE + C W+ G FIP++D LP+ NR +DGP +P+V+K+KDMGTVV+G
Sbjct: 399 SGLTGANLKEQS--DFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLG 456
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFV 149
K+ESG KGQ LV+MPN+ V V + SDD E SV PGEN+K++LKGIEE+++ PGF+
Sbjct: 457 KLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFI 516
Query: 150 LCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEK 209
LCD NN + R FDAQIVI+EHKSIIC GY+AV+HIH EEV + ALICL+DKK+GEK
Sbjct: 517 LCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEK 576
Query: 210 SKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
SKTRPRFVKQDQ+ I RL AG ICL+ FK FPQMGRFTLRDE
Sbjct: 577 SKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDE 619
>sp|Q8IYD1|ERF3B_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Homo sapiens GN=GSPT2 PE=1 SV=2
Length = 628
Score = 293 bits (750), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 170/223 (76%), Gaps = 2/223 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G N+KE + C W+ G FIP++D LP+ NR +DGP +P+V+K+KDMGTVV+G
Sbjct: 391 SGLTGANIKEQ--SDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLG 448
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFV 149
K+ESG KGQ LV+MPN+ V V + SDD E V PGEN+K++LKGIEE+++ PGF+
Sbjct: 449 KLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFI 508
Query: 150 LCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEK 209
LCDP+N + R FD QIVI+EHKSIIC GY+AV+HIH EEV + ALI L+DKK+GEK
Sbjct: 509 LCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEK 568
Query: 210 SKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
SKTRPRFVKQDQ+ I RL AG ICL+ FK FPQMGRFTLRDE
Sbjct: 569 SKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDE 611
>sp|Q5R4B3|ERF3B_PONAB Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Pongo abelii GN=GSPT2 PE=2 SV=1
Length = 628
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 170/223 (76%), Gaps = 2/223 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G N+KE + C W+ G FIP++D LP+ NR +DGP +P+V+K+KDMGTVV+G
Sbjct: 391 SGLTGANVKEQ--SDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLG 448
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFV 149
K+ESG KGQ LV+MPN+ V V + SDD E V PGEN+K++LKGIEE+++ PGF+
Sbjct: 449 KLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFI 508
Query: 150 LCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEK 209
LCDP+N + R FD QIVI+EHKSIIC GY+AV+HIH EEV + ALI L+DKK+GEK
Sbjct: 509 LCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEK 568
Query: 210 SKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
SKTRPRFVKQDQ+ I RL AG ICL+ FK FPQMGRFTLRDE
Sbjct: 569 SKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDE 611
>sp|Q149F3|ERF3B_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Mus musculus GN=Gspt2 PE=1 SV=1
Length = 632
Score = 291 bits (744), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 171/223 (76%), Gaps = 2/223 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G N+KE + C W+ G FIP++D+LP+ NR +DGP +P+V+K+KDMGTVV+G
Sbjct: 395 SGLTGANIKEQS--DFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLG 452
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFV 149
K+ESG KGQ LV+MPN+ V V + SDD E V PGEN+K++LKGIEE+++ PGF+
Sbjct: 453 KLESGSIFKGQQLVMMPNKHSVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFI 512
Query: 150 LCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEK 209
LC+P+N + R FD QIVI+EHKSIIC GY+AV+HIH EEV + ALI L+DKK+GEK
Sbjct: 513 LCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEK 572
Query: 210 SKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
SKTRPRFVKQDQ+ I RL AG ICL+ FK FPQMGRFTLRDE
Sbjct: 573 SKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDE 615
>sp|Q9HGI7|ERF3_CANMA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Candida maltosa GN=SUP35 PE=3 SV=2
Length = 712
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 151/224 (67%), Gaps = 1/224 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G LK+ V P+ C W++G + + ++D + ++NRK++GPF+MPV K KD+GTVV G
Sbjct: 476 SGYTGAGLKDRVNPKDCPWYEGPSLLEYLDNMDTMNRKINGPFMMPVSGKMKDLGTVVEG 535
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EVSSVGPGENIKVKLKGIEEDDVSPGF 148
K+ESG KKG +L+LMPN+TPV V ++++ E E + GE +++K+KG+EE+D+ PG+
Sbjct: 536 KIESGHVKKGTNLILMPNKTPVEVLTIYNETEQEADTAFSGEQVRLKIKGVEEEDLQPGY 595
Query: 149 VLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGE 208
VL P NP +T F+AQI I+E KSI+ G+S VMH+H EEV L ++K T
Sbjct: 596 VLTSPKNPVKTVTKFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNR 655
Query: 209 KSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
KSK P F K+ I LE + +C + +K +PQ+GRFTLRD+
Sbjct: 656 KSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQ 699
>sp|O13354|ERF3_CANAX Eukaryotic peptide chain release factor GTP-binding subunit
OS=Candida albicans GN=SUP35 PE=3 SV=1
Length = 715
Score = 217 bits (552), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 150/224 (66%), Gaps = 1/224 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G LK+ V P+ C W+ G + + ++D + ++NRK++GPF+MPV K KD+GT+V G
Sbjct: 479 SGYTGAGLKDRVDPKDCPWYDGPSLLEYLDNMDTMNRKINGPFMMPVSGKMKDLGTIVEG 538
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EVSSVGPGENIKVKLKGIEEDDVSPGF 148
K+ESG KKG +L++MPN+TP+ V ++++ E E + GE +++K+KGIEE+D+ PG+
Sbjct: 539 KIESGHVKKGTNLIMMPNKTPIEVLTIFNETEQECDTAFSGEQVRLKIKGIEEEDLQPGY 598
Query: 149 VLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGE 208
VL P NP +T F+AQI I+E KSI+ G+S VMH+H EEV L ++K T
Sbjct: 599 VLTSPKNPVKTVTRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNR 658
Query: 209 KSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
KSK P F K+ I LE ++C + +K +PQ+GRFTLRD+
Sbjct: 659 KSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQ 702
>sp|P05453|ERF3_YEAST Eukaryotic peptide chain release factor GTP-binding subunit
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SUP35 PE=1 SV=1
Length = 685
Score = 217 bits (552), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 150/224 (66%), Gaps = 1/224 (0%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
SG G NLK+ V P+ C W+ G + ++D + ++R ++ PF++P+ K KD+GT+V G
Sbjct: 448 SGYSGANLKDHVDPKECPWYTGPTLLEYLDTMNHVDRHINAPFMLPIAAKMKDLGTIVEG 507
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EVSSVGPGENIKVKLKGIEEDDVSPGF 148
K+ESG KKGQS +LMPN+T V + ++++ E EV GE +K+++KG+EE+D+SPGF
Sbjct: 508 KIESGHIKKGQSTLLMPNKTAVEIQNIYNETENEVDMAMCGEQVKLRIKGVEEEDISPGF 567
Query: 149 VLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGE 208
VL P NP ++ F AQI I+E KSII AG+S VMH+H EEV++ L+ ++K T
Sbjct: 568 VLTSPKNPIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNR 627
Query: 209 KSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
KSK P F K+ I LE +C++ ++ +PQ+GRFTLRD+
Sbjct: 628 KSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQ 671
>sp|Q9HGI4|ERF3_ZYGRO Eukaryotic peptide chain release factor GTP-binding subunit
OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2
Length = 662
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 159/249 (63%), Gaps = 2/249 (0%)
Query: 5 VKYAVSFWQPKLWTVRQEILLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSL 64
VK +F + + V++E++ + SG G L V P+ C W+ G A + ++D + +
Sbjct: 401 VKNLSNFLKAIGYNVKEEVVFM-PVSGYSGAGLGTRVDPKECPWYDGPALLEYMDNMSHV 459
Query: 65 NRKMDGPFLMPVVEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EV 123
+RKM+ PF++P+ K +DMGT+V GK+ESG +KG S +LMPN+ PV + ++++ E EV
Sbjct: 460 DRKMNAPFMLPIAAKMRDMGTIVEGKIESGHIRKGHSTLLMPNKIPVEIQNIYNETENEV 519
Query: 124 SSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAV 183
GE +K+K+KG+EE+D++PGFVL P NP + F AQ+ I+E KSI+ +G+S V
Sbjct: 520 DMAICGEQVKLKIKGVEEEDIAPGFVLTSPKNPVKNVTRFVAQVAIVELKSILSSGFSCV 579
Query: 184 MHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQ 243
MH+H EEV + L+ +++ T KSK P F K+ I LE +C++ ++ +PQ
Sbjct: 580 MHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQ 639
Query: 244 MGRFTLRDE 252
+GRFTLRD+
Sbjct: 640 LGRFTLRDQ 648
>sp|P23637|ERF3_OGAPI Eukaryotic peptide chain release factor GTP-binding subunit
OS=Ogataea pini GN=SUP2 PE=3 SV=1
Length = 741
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 148/230 (64%), Gaps = 1/230 (0%)
Query: 24 LLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDM 83
+L + SG G LKE V + W+ G + + ++D++P RK++ PF++P+ K KD+
Sbjct: 499 VLFMPVSGYTGAGLKERVSQKDAPWYNGPSLLEYLDSMPLAVRKINDPFMLPISSKMKDL 558
Query: 84 GTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EVSSVGPGENIKVKLKGIEED 142
GTV+ GK+ESG KKGQ+L++MPN+T V V ++++ E E S GE ++++L+GIEE+
Sbjct: 559 GTVIEGKIESGHVKKGQNLLVMPNKTQVEVTTIYNETEAEADSAFCGEQVRLRLRGIEEE 618
Query: 143 DVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLI 202
D+S G+VL N+P +T F+AQI I+E KSI+ G+S VMH+H EEV L+ +
Sbjct: 619 DLSAGYVLSSINHPVKTVTRFEAQIAIVELKSILSTGFSCVMHVHTAIEEVTFTQLLHNL 678
Query: 203 DKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
K T +SK P F KQ I LE +C++ + +PQ+GRFTLRD+
Sbjct: 679 QKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQ 728
>sp|Q9HGI8|ERF3_KLULA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SUP35
PE=3 SV=1
Length = 700
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 155/245 (63%), Gaps = 2/245 (0%)
Query: 9 VSFWQPKLWTVRQEILLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKM 68
+F + + V+++++ + SG G LKE V P+ C W+ G + + ++D + + +R +
Sbjct: 442 TNFLKAVGYNVKEDVIFM-PVSGYTGAGLKERVDPKDCPWYTGPSLLEYLDNMKTTDRHI 500
Query: 69 DGPFLMPVVEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EVSSVG 127
+ PF++P+ K KDMGTVV GK+ESG +KG +LMPNRT V + ++++ E EV
Sbjct: 501 NAPFMLPIASKMKDMGTVVEGKIESGHIRKGNQTLLMPNRTSVEILTIYNETESEVDMAV 560
Query: 128 PGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIH 187
GE +++++KG+EE+++S GFVL P NP + F AQI I+E KSI+ AG+S VMHIH
Sbjct: 561 CGEQVRLRIKGVEEEEISAGFVLTSPKNPVKNVTRFVAQIAIVELKSIMSAGFSCVMHIH 620
Query: 188 CVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRF 247
EEV V L+ ++K + KSK P F K+ I +E +C++ + +PQ+GRF
Sbjct: 621 TAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRF 680
Query: 248 TLRDE 252
TLRD+
Sbjct: 681 TLRDQ 685
>sp|Q9HGI6|ERF3_DEBHA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SUP35 PE=3 SV=4
Length = 701
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 147/230 (63%), Gaps = 1/230 (0%)
Query: 24 LLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDM 83
++ + SG G +K+ V P+ C W+ G + + F+D + ++ R ++GPF++P+ K KDM
Sbjct: 459 IIFMPVSGYTGAGIKDRVNPKDCPWYSGPSLLEFLDNMKTMQRHINGPFMLPISGKMKDM 518
Query: 84 GTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDE-EVSSVGPGENIKVKLKGIEED 142
GT++ GK+ESG KKG +L+LMPN+ + V ++++ E E + GE +++K+KG+EE+
Sbjct: 519 GTIIEGKIESGHIKKGGNLLLMPNKASIEVVAIFNETEQECDAAFCGEQVRLKIKGVEEE 578
Query: 143 DVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLI 202
D++PG+VL P P +T F+AQI I+E KSI+ G+S VMH+H EEV L +
Sbjct: 579 DLAPGYVLTSPLKPIKTITRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVTFIELKHKL 638
Query: 203 DKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
+K T KSK P F K+ I LE +C + + +PQ+GRFTLRD+
Sbjct: 639 EKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQ 688
>sp|O74718|ERF3_SCHPO Eukaryotic peptide chain release factor GTP-binding subunit
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sup35 PE=1 SV=2
Length = 662
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMGTVVMG 89
S GQN+K+ V +C W++G + + ++D++ L RK++ PF+MP+ K+KD+GT++ G
Sbjct: 427 SAYTGQNVKDRVDSSVCPWYQGPSLLEYLDSMTHLERKVNAPFIMPIASKYKDLGTILEG 486
Query: 90 KVESGEAKKGQSLVLMPNRTPVIVDQLWSD-DEEVSSVGPGENIKVKLKGIEEDDVSPGF 148
K+E+G KK ++++MP + V ++ + DEE+SS G+ ++++++G ++ DV G+
Sbjct: 487 KIEAGSIKKNSNVLVMPINQTLEVTAIYDEADEEISSSICGDQVRLRVRG-DDSDVQTGY 545
Query: 149 VLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGE 208
VL NP F AQI ILE SI+ GYS VMHIH EEV+ L+ +D KT
Sbjct: 546 VLTSTKNPVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLD-KTNR 604
Query: 209 KSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRDE 252
KSK P F + I LE +C+++F+ + MGRFTLRD+
Sbjct: 605 KSKKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQ 648
>sp|Q7YZN9|ERF3_DICDI Eukaryotic peptide chain release factor GTP-binding subunit
OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1
Length = 557
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 125/245 (51%), Gaps = 11/245 (4%)
Query: 12 WQPKLWTVRQEILLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGP 71
W PK + + SG N+ P+ P +C W+ G + I +D L + R G
Sbjct: 292 WNPK------KDFHFVPGSGYGTLNVLAPLAPGVCDWYSGPSLIGTLDNLSGMERNEGGA 345
Query: 72 FLMPVVEKFKDMGTV-VMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGE 130
+P+ +KD G V V+GKVESG GQS+ +MP +T V V L D + PGE
Sbjct: 346 LRIPITTSYKDRGIVNVIGKVESGTISVGQSIHIMPGKTKVEVISLTGDICSFKTARPGE 405
Query: 131 NIKVKLKGIEEDD-VSPGFVLCDPNNPARTARVFDAQIVIL---EHKSIICAGYSAVMHI 186
NI + LKGIE DD + PG +L + N P +A + IL E + + +SA+ H
Sbjct: 406 NITIALKGIEGDDSIRPGSILAEINRPVPVVSEIEAIVYILDMPEERRLFTPSFSAIFHA 465
Query: 187 HCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGR 246
H E+V VK+LI ID KT + K +P F K RL +CL++F PQ+ R
Sbjct: 466 HTAVEDVTVKSLIATIDTKTSTEIKQKPTFCKVGDAVKCRLVLGRAVCLEEFTTNPQLAR 525
Query: 247 FTLRD 251
FT+RD
Sbjct: 526 FTIRD 530
>sp|Q6L202|EF1A_PICTO Elongation factor 1-alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=tuf PE=3
SV=1
Length = 424
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 15/254 (5%)
Query: 11 FWQPKLWTVRQEILLIISP-----------SGQMGQNLKEPVGPEICTWWKGGAFIPFID 59
+ + + V+ EI +++P SG G N+ +P P + +WWKG + ++
Sbjct: 157 YSEKRFNEVKDEITKLLTPIGFKNVPIIPLSGYKGDNIMKP-SPNL-SWWKGPTLMEALN 214
Query: 60 ALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLW 117
AL + +D P +PV V +GTV +G++E+G K G ++ MP V +
Sbjct: 215 ALQVPAKPVDKPLRLPVEDVYSITGIGTVPVGRIETGVMKVGDKVIFMPANKAGDVKSIE 274
Query: 118 SDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDAQIVILEHKSIIC 177
E + GPG+NI ++GI ++++ G V NNP + F AQIV+L H S+I
Sbjct: 275 MHHEPMQQAGPGDNIGFNVRGIAKNELKRGDVCGPANNPPTVVKGFTAQIVVLNHPSVIA 334
Query: 178 AGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQ 237
AGY V H+H + ++ I+ K G K +P F+K IAI+++ + +++
Sbjct: 335 AGYKPVFHVHTAQVACRIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEK 394
Query: 238 FKLFPQMGRFTLRD 251
FPQ+GRF +RD
Sbjct: 395 VSEFPQLGRFAIRD 408
>sp|Q2FRI3|EF1A_METHJ Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=tuf PE=3 SV=1
Length = 425
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLM 105
W+KG +D L ++ + P +P+ + + +GTV +G+VE+G KKG ++ M
Sbjct: 201 WYKGKTLFGLLDELEVPDKPTEKPLRVPIQDAYSISGIGTVPVGRVETGILKKGMNVTFM 260
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + EE+ PG+NI ++GI +DDV G V +NP A F A
Sbjct: 261 PANKSGEVKSIEMHHEEIPQAVPGDNIGFNVRGIGKDDVRRGDVCGASDNPPAVAEEFTA 320
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
QIV+L+H S I GY+ V H H L+ +D +TG+ + P F+K AI+
Sbjct: 321 QIVVLQHPSAITVGYTPVFHCHTAQTACTFTELVKKLDPRTGQTLEENPTFLKAGDAAII 380
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+ +CL+ K FPQ+GRF +RD
Sbjct: 381 KCHPTKPLCLENAKEFPQLGRFAIRD 406
>sp|P35021|EF1A_SULSO Elongation factor 1-alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=tuf PE=1 SV=3
Length = 435
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
Query: 44 EICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQS 101
E W+ G ++D L + +D P +P+ V +GTV +G+VESG K G
Sbjct: 205 ENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDK 264
Query: 102 LVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTAR 161
+V MP V + + ++ PG+NI ++G+E+ D+ G V+ PNNP A
Sbjct: 265 IVFMPAGKVGEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPTVAD 324
Query: 162 VFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQ 221
F A+I+++ H + + GY+ V+H+H + V L+ +D +TG++++ P+F+KQ
Sbjct: 325 EFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGD 384
Query: 222 IAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+AI++ + +C++++ FP +GRF +RD
Sbjct: 385 VAIVKFKPIKPLCVEKYNEFPPLGRFAMRD 414
>sp|O93729|EF1A_PYRAE Elongation factor 1-alpha OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=tuf
PE=3 SV=1
Length = 444
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 114/206 (55%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLM 105
W+ G + D+ R +D P MP+ + F GTVV+G+VE+G K G +V++
Sbjct: 218 WYTGPTLLEVFDSFQPPQRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIV 277
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + + ++ PG+NI V ++GI ++DV G VL P+N A A
Sbjct: 278 PPAKVGDVRSIETHHMKLEQAQPGDNIGVNVRGIAKEDVKRGDVLGKPDNVPTVAEEIVA 337
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
+IV+L H + I GY+ VMHIH V + L+ +D +TG+ + +P+F+KQ +AI+
Sbjct: 338 RIVVLWHPTAIGPGYAPVMHIHTATVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIV 397
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+++ + ++F FP +GRF LRD
Sbjct: 398 KIKPLKPVVAEKFSDFPPLGRFALRD 423
>sp|A0RUM4|EF1A_CENSY Elongation factor 1-alpha OS=Cenarchaeum symbiosum (strain A)
GN=tuf PE=3 SV=1
Length = 436
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVV 87
SG G NL + E W+KG + D + + P +P+ V +GTV
Sbjct: 196 SGWKGDNLVKR--SENMPWYKGKTLLESFDDFKMAEKPVGKPLRVPIQDVYTITGVGTVP 253
Query: 88 MGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPG 147
+G+VE+G K G +V+MP+ + + + E+ S G+NI L+GIE+ D+ G
Sbjct: 254 VGRVETGTMKPGDKIVVMPSGAQGEIKSIETHHTEMPSAEAGDNIGFNLRGIEKKDIKRG 313
Query: 148 FVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTG 207
VL DP NP + A+ F AQI+++ H + + GY+ VMH H + + I+ TG
Sbjct: 314 DVLGDPANPPKVAKEFLAQIIVIHHPTALAPGYTPVMHCHTAQVAAIMSEFVSKINPATG 373
Query: 208 EKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+ P+F+K AI+++ ++ FK FP+MGRF LRD
Sbjct: 374 AVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPEMGRFALRD 417
>sp|A1RRJ3|EF1A_PYRIL Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=tuf PE=3 SV=1
Length = 444
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLM 105
W+ G + +D R +D P MP+ + F GTVV+G+VE+G K G +V++
Sbjct: 218 WYNGPTLLEALDTFQPPPRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIV 277
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + + ++ PG+NI V ++GI ++DV G VL +N A A
Sbjct: 278 PPAKVGDVRSIETHHMKLEQAQPGDNIGVNVRGISKEDVRRGDVLGKVDNVPTVAEEIVA 337
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
++VIL H + I GY+ VMHIH V + L+ +D +TG+ + +P+F+KQ +AI+
Sbjct: 338 RVVILWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIV 397
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+++ + ++F FP +GRF LRD
Sbjct: 398 KIKPLKPVVAEKFSEFPALGRFALRD 423
>sp|A4YCR6|EF1A_METS5 Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=tuf PE=3 SV=1
Length = 435
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 115/210 (54%), Gaps = 2/210 (0%)
Query: 44 EICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQS 101
E W+ G +D L + +D P +P+ E + +GTV +G+VESG K G
Sbjct: 205 ENMKWYNGPTLEEALDMLEIPPKPVDKPLRLPIQEVYSISGVGTVPVGRVESGVMKVGDK 264
Query: 102 LVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTAR 161
+V MP V + + ++ PG+NI ++GI++ DV G V+ NP A
Sbjct: 265 IVFMPAGKSAEVRSIETHHTKLEKAEPGDNIGFNVRGIDKKDVKRGDVVGHTTNPPTVAE 324
Query: 162 VFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQ 221
F A+++++ H + + GY+ V+H+H + V ++ +D KTG++++ P+F+KQ +
Sbjct: 325 EFTARVIVVWHPTALAVGYTPVVHVHTASIACRVSEIVARLDPKTGKEAEKNPQFIKQGE 384
Query: 222 IAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
AI++ + +C+++F FP +GRF +RD
Sbjct: 385 SAIVKFKPIKPLCVEKFSDFPPLGRFAMRD 414
>sp|A8MAJ1|EF1A_CALMQ Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=tuf PE=3
SV=1
Length = 444
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 4/224 (1%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVV 87
S G N+K V W+ G + +DA+ R +D P +P+ + F GTV+
Sbjct: 201 SAVRGDNIK--VKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVFSITGAGTVI 258
Query: 88 MGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPG 147
G+VESG K G ++V +P V + + ++ G+N+ + ++G E D+ G
Sbjct: 259 TGRVESGVVKVGDTIVALPPAKVGDVRSIETHHMKLEEAKAGDNVGINVRGFERQDLKRG 318
Query: 148 FVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTG 207
V+ NNP A A+I +LEH + I GY+ VMH+H + LI +D TG
Sbjct: 319 DVVGHLNNPPTVAEEIVARIAVLEHPTTIGVGYTPVMHVHTATVPTQIIELISRLDPATG 378
Query: 208 EKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+ + +P+F+K+ +A++RL+ + +++F P +GRF+LRD
Sbjct: 379 QTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRD 422
>sp|A3MV69|EF1A_PYRCJ Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=tuf PE=3 SV=1
Length = 444
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 113/206 (54%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLM 105
W++G + +D R D P MP+ + F GTVV+G+VE+G K G +V++
Sbjct: 218 WYQGPTLLEVLDTFQPPPRPTDKPLRMPIQDVFSITGAGTVVVGRVETGVLKVGDKVVIV 277
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + + ++ PG+N+ V ++GI ++DV G VL +N A A
Sbjct: 278 PPAKVGDVRSIETHHMKLEQAQPGDNVGVNVRGINKEDVKRGDVLGKVDNIPTVAEEIVA 337
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
+IV+L H + I GY+ VMHIH V + L+ +D +TG+ + +P+F+KQ +AI+
Sbjct: 338 RIVVLWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIV 397
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+++ + ++F FP +GRF LRD
Sbjct: 398 KIKPLKPVVAEKFSDFPPLGRFALRD 423
>sp|P50256|EF1AC_PORPU Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1
Length = 449
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 5/230 (2%)
Query: 27 ISPSGQMGQNLKEPVGPE--ICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKD 82
+ SG G+NL E G + + W+KG + +DA R +D P +P+ V K
Sbjct: 191 VPTSGWTGENLFERTGGDHALGKWYKGPCLLEALDACDPPKRPVDKPLRLPLQDVYKIGG 250
Query: 83 MGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEED 142
+GTV +G+VE+G K G + P+ V + E ++ GPG+N+ +K +
Sbjct: 251 IGTVPVGRVETGVIKPGMVVTFAPSGLSTEVKSVEMHHEALTQAGPGDNVGFNVKNVSVK 310
Query: 143 DVSPGFVLCDP-NNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICL 201
D+ G+V D N+P + F+AQ++IL H I AGY+ V+ H LI
Sbjct: 311 DLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILK 370
Query: 202 IDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+D+++G+K + P+ +K A++++ A+ +C++ F +P +GRF +RD
Sbjct: 371 MDRRSGKKLEDSPKMIKSGDAAMVKMVASKPMCVEAFTSYPPLGRFAVRD 420
>sp|A4WKK8|EF1A_PYRAR Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=tuf PE=3 SV=1
Length = 444
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLM 105
W+ G + +D R D P +P+ + F GTVV+G+VE+G K G +V++
Sbjct: 218 WYNGPTLLEVLDTFQPPPRPTDKPLRLPIQDVFSITGAGTVVVGRVETGVLKAGDRVVVV 277
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + + ++ PG+N+ V ++GI ++DV G VL +N A
Sbjct: 278 PPAKVGDVRSIETHHMKLEQAQPGDNVGVNVRGINKEDVKRGDVLGKVDNIPTVTEEIIA 337
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
+IV+L H + I GY+ VMHIH V + LI +D +TG+ + +P+F+KQ +AI+
Sbjct: 338 RIVVLWHPTAIGPGYAPVMHIHTATVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIV 397
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+++ + ++F FP +GRF LRD
Sbjct: 398 KIKPLKPVVAEKFSDFPPLGRFALRD 423
>sp|A7I656|EF1A_METB6 Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8)
GN=tuf PE=3 SV=1
Length = 425
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 15 KLWTVRQEILLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLM 74
K+ + E L I S G N+K PE W+KG A IP +D ++ D P +
Sbjct: 170 KMVGYKPEETLFIPISSLQGINIKAN-SPE-TPWYKGPALIPALDTFKEPSKPTDKPLRL 227
Query: 75 PVVEKFK--DMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENI 132
P+ + + +GTV +G+VE+G KKG + MP + + EE+ PG+N+
Sbjct: 228 PIQDSYSISGIGTVPVGRVETGIMKKGMKVSFMPANKDGEIKSIEMHHEEIPQAVPGDNV 287
Query: 133 KVKLKGIEEDDVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEE 192
++GI + D+ G V P A F AQ+V+L+H S I GY+ V H H
Sbjct: 288 GFNVRGIAKGDIRRGDVCGPAEQPPTVADEFTAQVVVLQHPSAITVGYTPVFHCHTTQTA 347
Query: 193 VNVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
L +D ++G+ + P F+K AI++++ + ++ K PQ+GRF +RD
Sbjct: 348 CTFIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRD 406
>sp|Q9V0V7|EF1A_PYRAB Elongation factor 1-alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=tuf PE=3 SV=1
Length = 428
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+ G I +D +P + +D P +P+ V K +GTV +G+VE+G+ K G ++
Sbjct: 197 WYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFE 256
Query: 106 PNRT----PVI--VDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNP--- 156
P T P+ V + E + PG+NI ++G+ ++D+ G V P+ P
Sbjct: 257 PASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHPDKPPTV 316
Query: 157 ARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRF 216
RT F AQI++L H + I GYS V+H H V + L+ ID +TG ++ P+F
Sbjct: 317 VRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQF 376
Query: 217 VKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+K AI+ L + L+ K PQ+GRF +RD
Sbjct: 377 IKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRD 411
>sp|Q5R6Y0|HBS1L_PONAB HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1
Length = 684
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 20 RQEILLIISPSGQMGQNL-KEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVE 78
++ + I SG G+NL E+ W+KG + ID+ R +D PF + V +
Sbjct: 435 KESDVAFIPTSGLSGENLITRSRSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSD 494
Query: 79 KFKDMGT--VVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKL 136
FKD G+ + GK+E+G + G L+ MP V + DE V G+++ + L
Sbjct: 495 VFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTL 554
Query: 137 KGIEEDDVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVK 196
G++ ++ G + C P P + F A+I+I + I G+ ++H V+E +K
Sbjct: 555 VGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIK 614
Query: 197 ALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLR 250
LI +++K TGE +K +P+F+ + Q A++ L+ I L+ +K F ++GRF LR
Sbjct: 615 RLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLR 668
>sp|Q9Y450|HBS1L_HUMAN HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1
Length = 684
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 119/228 (52%), Gaps = 3/228 (1%)
Query: 26 IISPSGQMGQNL-KEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFKDMG 84
I SG G+NL E+ W+KG + ID+ R +D PF + V + FKD G
Sbjct: 441 FIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQG 500
Query: 85 T--VVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEED 142
+ + GK+E+G + G L+ MP V + DE V G+++ + L G++
Sbjct: 501 SGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDII 560
Query: 143 DVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLI 202
++ G + C P P + F A+I+I + I G+ ++H V+E +K LI ++
Sbjct: 561 KINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVL 620
Query: 203 DKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLR 250
+K TGE +K +P+F+ + Q A++ L+ I L+ +K F ++GRF LR
Sbjct: 621 NKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLR 668
>sp|A1RXW9|EF1A_THEPD Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5)
GN=tuf PE=3 SV=1
Length = 433
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 43 PEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQ 100
PE W+ G D R +D P +P+ V K +GTV +G+VE+G K G
Sbjct: 204 PEKTPWYDGPCLYEAFDFFKEPPRPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGD 263
Query: 101 SLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTA 160
+++ P + V + + + PG+NI +KG+E+ + G V NP A
Sbjct: 264 KIIINPPKAVGEVKSIETHHTPLQEAIPGDNIGFNVKGVEKSQLRRGDVAGHTTNPPTVA 323
Query: 161 RVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQD 220
F +I +L H + I AGY+ V+HIH V + L+ +D +TG ++ +P+++KQ
Sbjct: 324 EEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEELLQKLDPRTGSVAEEKPQYIKQG 383
Query: 221 QIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
AI+R + + ++++ FP +GRF +RD
Sbjct: 384 DSAIVRFKPRKPVVVEKYSEFPPLGRFAIRD 414
>sp|Q8PUR8|EF1A_METMA Elongation factor 1-alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=tuf PE=3 SV=1
Length = 422
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKF--KDMGTVVMGKVESGEAKKGQSLVLM 105
W+KG A + +++L + P +PV + + +GTV +G+VE+G KKG +V M
Sbjct: 201 WYKGPAIMEALNSLKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVMKKGDKVVFM 260
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + EE+ PG+NI ++GI ++DV G V +NP + A F
Sbjct: 261 PGGAGGEVKSIEMHHEEIPQATPGDNIGWNVRGIGKNDVRRGDVCGHADNPPKVADEFVG 320
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
QIV+L+H S I AGY+ V H H + AL +D KTG+ + P F+K AI+
Sbjct: 321 QIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDPKTGQVKEENPTFLKAGDAAIV 380
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
++ + ++ K PQ+GRF +RD
Sbjct: 381 TIKPTKPMVIEPVKEIPQLGRFAIRD 406
>sp|Q04634|EF1A_TETPY Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1
Length = 435
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 110/207 (53%), Gaps = 3/207 (1%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+KG + +DAL R +D P +P+ V K +GTV +G+VE+G K G S+
Sbjct: 211 WYKGPILVEALDALEPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMSIQFA 270
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDP-NNPARTARVFD 164
PN+ + E++ PG+N+ +KG+ D+ G V D N+PA+ A F
Sbjct: 271 PNKVIAECKSVEMHHEQLPEAVPGDNVGFNIKGVSVKDIRRGNVASDAKNDPAKEAATFY 330
Query: 165 AQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAI 224
+Q++I+ H I AGY+ V+ H + + ID++TG+ + P+F+K A+
Sbjct: 331 SQVIIMNHPGQIQAGYTPVLDCHTAHIACKFETIHDKIDRRTGKSQEENPKFIKNGDAAL 390
Query: 225 MRLEAAGVICLDQFKLFPQMGRFTLRD 251
+ L +C++ F+ +P +GR+ +RD
Sbjct: 391 VTLIPTKALCVEVFQEYPPLGRYAVRD 417
>sp|Q979T1|EF1A_THEVO Elongation factor 1-alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=tuf
PE=3 SV=2
Length = 424
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 16 LWTVRQEILLIISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMP 75
L T+ + + SG G N+ +P P + W+KG + + +DA + ++ P +P
Sbjct: 173 LKTIGYKDATFVPISGYKGDNVTKP-SPNM-PWYKGPSLLQALDAFKVPEKPINKPLRVP 230
Query: 76 V--VEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIK 133
V V +GTV +G+VE+G K G ++ +P V + E + PG+NI
Sbjct: 231 VEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIG 290
Query: 134 VKLKGIEEDDVSPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEV 193
++GI ++D+ G V ++P R F AQIV+L H S+I GY V H+H
Sbjct: 291 FNVRGIAKNDIKRGDVCGHLDSPPTVVRAFTAQIVVLNHPSVIAPGYKPVFHVHTAQVAC 350
Query: 194 NVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+ ++ ++ K G K +P F+K IAI+++ + +++ PQ+GRF +RD
Sbjct: 351 KIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRD 408
>sp|Q8TRC4|EF1A_METAC Elongation factor 1-alpha OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tuf PE=3
SV=1
Length = 422
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 27 ISPSGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKF--KDMG 84
I S MG N+ + E W+KG + +D L + P +PV + + +G
Sbjct: 182 IPTSAFMGDNITKL--SEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIG 239
Query: 85 TVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDV 144
TV +G+VE+G KKG ++ MP V + EE+ PG+NI ++GI ++DV
Sbjct: 240 TVPVGRVETGVMKKGDKVIFMPGGAGGEVKSIEMHHEEIPQAYPGDNIGWNVRGIGKNDV 299
Query: 145 SPGFVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDK 204
G V +NP + A F QIV+L+H S I AGY+ V H H + +L +D
Sbjct: 300 RRGDVCGHTDNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDP 359
Query: 205 KTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
KTG+ + P F+K AI+ ++ + ++ K PQ+GRF +RD
Sbjct: 360 KTGQVKEEHPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRD 406
>sp|P26751|EF1A_PYRWO Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1
Length = 430
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+ G I +D +P + +D P +P+ V K +GTV +G+VE+G+ + G+ ++
Sbjct: 199 WYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFE 258
Query: 106 PNRT----PVI--VDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNP--- 156
P T P+ V + E + PG+NI ++G+ ++D+ G V NP
Sbjct: 259 PASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTV 318
Query: 157 ARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRF 216
RT F AQI++L H + I GYS V+H H V + L+ +D KTG + P+F
Sbjct: 319 VRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQF 378
Query: 217 VKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+K AI+ L + L+ K PQ+GRF +RD
Sbjct: 379 IKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRD 413
>sp|Q8U152|EF1A_PYRFU Elongation factor 1-alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=tuf PE=3 SV=1
Length = 428
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+ G I +D +P + +D P +P+ V K +GTV +G+VE+G+ + G+ ++
Sbjct: 197 WYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFE 256
Query: 106 PNRT----PVI--VDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNP--- 156
P T P+ V + E + PG+NI ++G+ ++D+ G V NP
Sbjct: 257 PASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTV 316
Query: 157 ARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRF 216
RT F AQI++L H + I GYS V+H H V + L+ +D KTG + P+F
Sbjct: 317 VRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQF 376
Query: 217 VKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+K AI+ L + L+ K PQ+GRF +RD
Sbjct: 377 IKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRD 411
>sp|Q8LPC4|EF1A_PORYE Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1
Length = 449
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 5/230 (2%)
Query: 27 ISPSGQMGQNLKEPVGPE--ICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKD 82
+ SG G+NL E + W+KG + +D R +D P +P+ V K
Sbjct: 191 VPTSGWTGENLFERTDKTHALGKWYKGPCLLEALDNCDPPKRPVDKPLRLPLQDVYKIGG 250
Query: 83 MGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEED 142
+GTV +G+VE+G K G + P+ V + E + GPG+N+ +K +
Sbjct: 251 IGTVPVGRVETGLIKPGMVVTFAPSGLSTEVKSVEMHHEALPQAGPGDNVGFNVKNVSVK 310
Query: 143 DVSPGFVLCDP-NNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICL 201
D+ G+V D N+P + F+AQ++IL H I AGY+ V+ H LI
Sbjct: 311 DLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILK 370
Query: 202 IDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+D+++G+K + P+ +K A++++ A+ +C++ F +P +GRF +RD
Sbjct: 371 MDRRSGKKLEDTPKMIKSGDAAMVKMVASKPMCVEAFTQYPPLGRFAVRD 420
>sp|O27132|EF1A_METTH Elongation factor 1-alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=tuf PE=3 SV=1
Length = 413
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 2/210 (0%)
Query: 44 EICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQS 101
E W+KG + +D L + + +D P +P+ V +GTV +G+VE+G KKG++
Sbjct: 187 ENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGEN 246
Query: 102 LVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTAR 161
++ P V + E + PG+NI ++G+ ++D+ G V +NP + A+
Sbjct: 247 VIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGHLDNPPKVAK 306
Query: 162 VFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQ 221
F AQIV+L+H +I GY+ V H H L+ ++ TG+ + P F+K
Sbjct: 307 EFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGN 366
Query: 222 IAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
A+++++ + +++ K P MGRF +RD
Sbjct: 367 AAVVKVKPTKPLVIEKIKDIPHMGRFAIRD 396
>sp|P19486|EF1A_THEAC Elongation factor 1-alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=tuf PE=3 SV=2
Length = 424
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 30 SGQMGQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVV 87
SG G N+ +P P + W+KG + +DA + ++ P +PV V +GTV
Sbjct: 187 SGYKGDNVTKP-SPNM-PWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGIGTVP 244
Query: 88 MGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPG 147
+G+VE+G K G ++ +P V + E + PG+NI ++GI ++D+ G
Sbjct: 245 VGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRG 304
Query: 148 FVLCDPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTG 207
V + P + F AQI++L H S+I GY V H+H + ++ ++ K G
Sbjct: 305 DVCGHLDTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDG 364
Query: 208 EKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
K +P F+K +AI+++ + +++ PQ+GRF +RD
Sbjct: 365 TTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRD 408
>sp|A0B7D6|EF1A_METTP Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=tuf PE=3 SV=1
Length = 424
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+ G + ++AL + ++ P +PV V +GTV +G+VE+G KKG ++
Sbjct: 203 WYTGPTVLDALNALKEPQKPVNLPLRIPVQDVYSISGVGTVPVGRVETGVLKKGDKVIFE 262
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + +E+ PG+NI ++GI ++D+ G V +NP A+ F A
Sbjct: 263 PAHVSGEVKSIEIHHQEIPEAYPGDNIGWNVRGIGKNDIRRGDVCGHVDNPPTVAKEFTA 322
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
QIV+L+H S I AGY+ V H H + + +D +TG + P F+K AI+
Sbjct: 323 QIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAII 382
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+ + +++ K PQ+GRF +RD
Sbjct: 383 SVRPTKPMVIEKVKEIPQLGRFAIRD 408
>sp|P40911|EF1A_AJECG Elongation factor 1-alpha OS=Ajellomyces capsulata (strain G186AR /
H82 / ATCC MYA-2454 / RMSCC 2432) GN=TEF PE=2 SV=1
Length = 460
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 30 SGQMGQNLKEPVGPEICTWWKG------------GAFIPFIDALPSLNRKMDGPFLMPV- 76
SG G N+ EP P CTW+KG + IDA+ R D P +P+
Sbjct: 193 SGFEGDNMIEP-SPN-CTWYKGWNKETASGKSSGKTLLDAIDAIEPPTRPTDKPLRLPLQ 250
Query: 77 -VEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVK 135
V K +GTV +G+VE+G K G + P+ V + +++ + PG+N+
Sbjct: 251 DVYKISGIGTVPVGRVETGVIKPGMVVTFAPSNVTTEVKSVEMHHQQLQAGYPGDNVGFN 310
Query: 136 LKGIEEDDVSPGFVLCDP-NNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVN 194
+K + +V G V D N+P + F+AQ+++L H + AGY+ V+ H
Sbjct: 311 VKNVSVKEVRRGNVAGDSKNDPPKGCESFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACK 370
Query: 195 VKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
LI ID++TG+ + P+F+K AI+++ + +C++ F +P +GRF +RD
Sbjct: 371 FSELIEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEPFTDYPPLGRFAVRD 427
>sp|P17196|EF1A_SULAC Elongation factor 1-alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=tuf PE=3 SV=1
Length = 435
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 2/206 (0%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLM 105
W+ G +D L + +D P +P+ E + +G V +G++ESG K G +V M
Sbjct: 209 WYNGPTLEELLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFM 268
Query: 106 PNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPARTARVFDA 165
P V + + ++ PG+NI ++G+E+ DV G V NP A F A
Sbjct: 269 PVGKIGEVRSIETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGDVAGSVQNPPTVADEFTA 328
Query: 166 QIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIM 225
Q++++ H + + GY+ V+H+H + V + ID KTG++++ P+F+K AI+
Sbjct: 329 QVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIV 388
Query: 226 RLEAAGVICLDQFKLFPQMGRFTLRD 251
+ + + ++F+ FP +GRF +RD
Sbjct: 389 KFKPIKELVAEKFREFPALGRFAMRD 414
>sp|O59153|EF1A_PYRHO Elongation factor 1-alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=tuf PE=3 SV=1
Length = 428
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+ G I +D +P + +D P +P+ V K +GTV +G+VE+G+ K G ++
Sbjct: 197 WYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFE 256
Query: 106 PNRT----PVI--VDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNP--- 156
P T P+ V + E + PG+NI ++G+ ++D+ G V + P
Sbjct: 257 PASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTV 316
Query: 157 ARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRF 216
RT F AQI++L H + I GYS V+H H V + ++ +D +TG + P+F
Sbjct: 317 VRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQF 376
Query: 217 VKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+K AI+ L + L+ K PQ+GRF +RD
Sbjct: 377 IKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRD 411
>sp|A2STF0|EF1A_METLZ Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1
Length = 425
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 34 GQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKV 91
G N+KE W+KG + +D + D P +P+ V +GTV +G+V
Sbjct: 189 GDNIKE--ASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRV 246
Query: 92 ESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLC 151
E+G KKGQ + MP V + EE PG+N+ ++GI ++DV G V
Sbjct: 247 ETGILKKGQKISFMPANVTGEVKSIEMHHEEFPEALPGDNVGFNVRGIAKNDVRRGDVCG 306
Query: 152 DPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIH-----CVAEEVNVKALICLIDKKT 206
NP A F AQ+V+L+H S++ GY+ V H H C+ E+N K +D ++
Sbjct: 307 PIENPPTVAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKK-----LDPRS 361
Query: 207 GEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
G+ + P F+K AI + + ++ K PQ+GRF +RD
Sbjct: 362 GQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRD 406
>sp|C5A5P4|EF1A_THEGJ Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1
Length = 428
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+KG I +D +P + +D P +P+ V K +GTV +G+VE+G + G ++
Sbjct: 197 WYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFE 256
Query: 106 PNRT----PVI--VDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPART 159
P T P+ V + E + PG+NI ++G+ ++D+ G V NP
Sbjct: 257 PASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTV 316
Query: 160 AR---VFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRF 216
R F AQI++L H + I GY+ V+H H V + L+ +D +TG + P+F
Sbjct: 317 VRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQF 376
Query: 217 VKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+K AI+ L + ++ K PQMGRF +RD
Sbjct: 377 IKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRD 411
>sp|P25166|EF1A_STYLE Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1
Length = 446
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 22/258 (8%)
Query: 5 VKYAVSFWQPKLWTV-RQEILLIISPSGQMGQNL--KEPVGPEICTWWKGGAFIPFIDAL 61
+K +S + K+W RQ+ + IS G G N+ K P P W+ G I +DAL
Sbjct: 170 IKKELSDYLKKIWLQPRQDPFIPIS--GWHGDNMLEKSPNMP----WFTGSTLIDALDAL 223
Query: 62 PSLNRKMDGPFLMPVVEKFK--DMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSD 119
R D P +P+ + +K +GTV +G+VE+G K G L P +
Sbjct: 224 DQPKRPKDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVLTFAPMNITTECKSVEMH 283
Query: 120 DEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDP-NNPARTARVFDAQIVILEHKSIICA 178
E ++ PG+N+ +K + D+ G+V D N+PA+ F AQ+++L H I
Sbjct: 284 HESLTEAEPGDNVGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQK 343
Query: 179 GYSAVM-----HIHCVAEEVNVKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVI 233
GY+ V+ HI C +E+ K +D+++G+ + P+F+K + A++R+ +
Sbjct: 344 GYAPVLDCHTAHIACKFDEIESK-----VDRRSGKVLEEEPKFIKSGEAALVRMVPQKPM 398
Query: 234 CLDQFKLFPQMGRFTLRD 251
C++ F +P +GRF +RD
Sbjct: 399 CVEAFNQYPPLGRFAVRD 416
>sp|P0CY35|EF1A1_CANAL Elongation factor 1-alpha 1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TEF1 PE=3 SV=1
Length = 458
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 17/237 (7%)
Query: 30 SGQMGQNLKEPVGPEICTWWKG------------GAFIPFIDALPSLNRKMDGPFLMPV- 76
SG G N+ EP C W+KG + IDA+ R D P +P+
Sbjct: 192 SGWNGDNMIEP--STNCPWYKGWEKETKSGKVTGKTLLEAIDAIEPPTRPTDKPLRLPLQ 249
Query: 77 -VEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVK 135
V K +GTV +G+VE+G K G + P V + E+++ PG+N+
Sbjct: 250 DVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLAEGVPGDNVGFN 309
Query: 136 LKGIEEDDVSPGFVLCDP-NNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVN 194
+K + ++ G V D N+P + F+AQ+++L H I AGYS V+ H
Sbjct: 310 VKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCHTAHIACK 369
Query: 195 VKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
L+ ID++TG+K + P+FVK AI+++ +C++ F +P +GRF +RD
Sbjct: 370 FDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKPMCVEAFTDYPPLGRFAVRD 426
>sp|P17197|EF1A_THECE Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1
Length = 428
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 48 WWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKVESGEAKKGQSLVLM 105
W+ G I +D +P + D P +P+ V K +GTV +G+VE+G + G ++
Sbjct: 197 WYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFE 256
Query: 106 PNRT----PVI--VDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLCDPNNPART 159
P T P+ V + E + PG+NI ++G+ ++D+ G V NNP
Sbjct: 257 PASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTV 316
Query: 160 AR---VFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSKTRPRF 216
R F AQI++L H + I GY+ V+H H + V + L+ +D +TG + P+F
Sbjct: 317 VRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQF 376
Query: 217 VKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
+K AI+ L + ++ K PQMGRF +RD
Sbjct: 377 IKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRD 411
>sp|Q9HDF6|EF1A_PIRIN Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2
SV=1
Length = 462
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 30 SGQMGQNLKEPVG--PEICTWWK----------GGAFIPFIDALPSLNRKMDGPFLMPV- 76
SG G N+ EP P W K G + IDA+ R D P +P+
Sbjct: 192 SGWHGDNMLEPSTNMPWYKGWSKEVKGSSSPATGKTLVDAIDAIEPPVRPSDKPLRLPLQ 251
Query: 77 -VEKFKDMGTVVMGKVESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVK 135
V K +GTV +G+VE+G K G + P+ V + E+++ PG+N+
Sbjct: 252 DVYKIGGIGTVPVGRVETGIIKPGMVVSFAPSNVTTEVKSVEMHHEQLAEGLPGDNVGFN 311
Query: 136 LKGIEEDDVSPGFVLCDP-NNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVN 194
+K + D+ G V D N+PA+ A F+AQ+++L H I AGY+ V+ H
Sbjct: 312 VKNVSVKDIRRGDVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACK 371
Query: 195 VKALICLIDKKTGEKSKTRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
LI ID++TG+ + P+FVK AI++L + +C++ + +P +GRF +RD
Sbjct: 372 FSELIEKIDRRTGKTMEAAPKFVKSGDAAIVKLVPSKPMCVESYNEYPPLGRFAVRD 428
>sp|A5ULM5|EF1A_METS3 Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2
Length = 413
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 34 GQNLKEPVGPEICTWWKGGAFIPFIDALPSLNRKMDGPFLMPV--VEKFKDMGTVVMGKV 91
G N+K+ P +W+KG + +D L + + + P +P+ V +GTV +G+V
Sbjct: 179 GDNIKD-ASPN-TSWYKGDTLMQALDNLAAPEKPVSLPLRIPIQDVYSITGVGTVPVGRV 236
Query: 92 ESGEAKKGQSLVLMPNRTPVIVDQLWSDDEEVSSVGPGENIKVKLKGIEEDDVSPGFVLC 151
E+G KKG++++ P V + E + PG+NI ++G+ ++D+ G V
Sbjct: 237 ETGVMKKGENVIFEPAGASGEVKSIEMHHETFETAEPGDNIGFNVRGVGKNDIRRGDVAG 296
Query: 152 DPNNPARTARVFDAQIVILEHKSIICAGYSAVMHIHCVAEEVNVKALICLIDKKTGEKSK 211
++ A+ FDAQIV+L+H +I GY+ V H H L +D TG+ ++
Sbjct: 297 HVDDAPAVAKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAE 356
Query: 212 TRPRFVKQDQIAIMRLEAAGVICLDQFKLFPQMGRFTLRD 251
P F+K A ++++ + ++ K PQMGRF +RD
Sbjct: 357 ENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRD 396
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,090,707
Number of Sequences: 539616
Number of extensions: 4075406
Number of successful extensions: 11376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 868
Number of HSP's that attempted gapping in prelim test: 9407
Number of HSP's gapped (non-prelim): 1144
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)