Query psy10359
Match_columns 249
No_of_seqs 224 out of 1437
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 15:54:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.6E-56 9E-61 371.0 17.7 181 27-207 5-185 (188)
2 4fru_A Cyclophilin B, peptidyl 100.0 3.2E-56 1.1E-60 370.2 16.7 179 28-206 3-181 (185)
3 2haq_A Cyclophilin; rotamase, 100.0 1.5E-54 5.2E-59 355.4 18.8 167 32-199 6-172 (172)
4 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.6E-53 5.4E-58 349.8 20.4 165 34-199 7-171 (172)
5 1a58_A Cyclophilin; isomerase, 100.0 2.4E-53 8.2E-58 350.5 20.8 164 36-200 5-177 (177)
6 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.4E-53 8E-58 351.0 20.7 164 35-199 7-179 (179)
7 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.8E-53 9.6E-58 348.7 20.7 166 33-199 7-172 (173)
8 2z6w_A Peptidyl-prolyl CIS-tra 100.0 3E-53 1E-57 346.3 20.5 162 37-199 3-164 (165)
9 3pmp_A Cyclophilin A; peptidyl 100.0 2.9E-53 1E-57 346.2 20.2 162 37-199 2-163 (164)
10 2he9_A NK-tumor recognition pr 100.0 6.7E-53 2.3E-57 351.4 20.7 166 34-200 16-190 (192)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 4.5E-53 1.6E-57 348.7 18.7 165 35-199 8-177 (177)
12 1qng_A Peptidyl-prolyl CIS-tra 100.0 4.1E-53 1.4E-57 347.0 18.2 162 36-199 2-170 (170)
13 2igv_A Peptidyl-prolyl CIS-tra 100.0 6.5E-53 2.2E-57 346.7 19.5 164 36-200 2-172 (173)
14 3rdd_A Peptidyl-prolyl CIS-tra 100.0 6.3E-53 2.1E-57 349.7 19.3 169 30-199 15-183 (184)
15 2poy_A Peptidyl-prolyl CIS-tra 100.0 7.1E-53 2.4E-57 349.6 19.1 168 30-198 12-186 (186)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.3E-51 4.4E-56 344.0 20.5 165 35-200 25-191 (193)
17 2c3b_A Ppiase, cyclophilin; is 100.0 3.1E-52 1.1E-56 342.2 13.2 163 36-199 2-172 (172)
18 1z81_A Cyclophilin; structural 100.0 1.3E-50 4.4E-55 344.9 18.4 164 36-199 58-229 (229)
19 2ose_A Probable peptidyl-proly 100.0 1.4E-50 4.9E-55 346.6 16.4 173 32-208 9-213 (234)
20 1zkc_A Peptidyl-prolyl CIS-tra 100.0 5.5E-50 1.9E-54 334.4 18.8 174 30-214 12-187 (197)
21 2poe_A Cyclophilin-like protei 100.0 2E-49 7E-54 328.7 18.0 153 49-207 23-180 (185)
22 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.8E-49 6.2E-54 322.7 16.9 153 49-207 7-161 (161)
23 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.2E-49 7.4E-54 332.9 16.8 170 37-217 6-188 (201)
24 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.4E-48 4.8E-53 318.8 16.6 155 36-199 10-165 (166)
25 2b71_A Cyclophilin-like protei 100.0 2.7E-48 9.3E-53 324.1 17.3 157 37-204 38-195 (196)
26 2fu0_A Cyclophilin, putative; 100.0 2.7E-48 9.1E-53 315.3 16.7 154 37-199 5-159 (160)
27 2hq6_A Serologically defined c 100.0 5.2E-48 1.8E-52 320.1 16.1 166 30-207 17-185 (185)
28 2a2n_A Peptidylprolyl isomeras 100.0 1.4E-47 4.9E-52 315.3 17.4 153 37-198 21-175 (176)
29 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.9E-47 6.5E-52 320.2 16.9 156 36-200 10-166 (203)
30 1ihg_A Cyclophilin 40; ppiase 100.0 4E-47 1.4E-51 346.1 20.3 167 37-204 15-189 (370)
31 3bkp_A Cyclophilin; malaria, i 100.0 1.3E-47 4.3E-52 327.8 15.6 175 29-215 13-206 (232)
32 1w74_A Peptidyl-prolyl CIS-tra 100.0 5.4E-47 1.8E-51 315.3 17.5 157 33-199 19-191 (191)
33 1v9t_A Cyclophilin B; beta bar 100.0 2E-45 7E-50 300.4 14.6 152 37-199 4-165 (166)
34 1lop_A Cyclophilin A; rotamase 100.0 1.9E-45 6.4E-50 300.0 12.0 144 49-199 6-163 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 9.5E-45 3.2E-49 296.8 13.7 151 38-199 4-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.7E-38 5.8E-43 286.2 7.9 156 29-195 160-355 (369)
37 4fru_A Cyclophilin B, peptidyl 97.6 2.2E-05 7.5E-10 64.4 2.3 41 206-246 145-185 (185)
38 3ich_A Peptidyl-prolyl CIS-tra 96.8 0.00043 1.5E-08 56.8 1.9 41 206-246 148-188 (188)
39 2wfi_A Peptidyl-prolyl CIS-tra 95.0 0.01 3.6E-07 48.0 2.3 30 206-235 150-179 (179)
40 1a58_A Cyclophilin; isomerase, 94.6 0.013 4.6E-07 47.3 2.2 30 206-235 147-176 (177)
41 2he9_A NK-tumor recognition pr 94.6 0.016 5.5E-07 47.5 2.5 32 206-237 160-191 (192)
42 1mzw_A Cyclophilin H, U-snRNP- 94.5 0.012 4E-07 47.7 1.4 30 206-235 148-177 (177)
43 2haq_A Cyclophilin; rotamase, 94.3 0.014 4.7E-07 47.0 1.4 30 206-235 143-172 (172)
44 2c3b_A Ppiase, cyclophilin; is 94.3 0.019 6.5E-07 46.2 2.3 30 206-235 142-172 (172)
45 1qng_A Peptidyl-prolyl CIS-tra 93.8 0.029 9.8E-07 45.0 2.4 29 206-235 142-170 (170)
46 1z81_A Cyclophilin; structural 93.7 0.025 8.5E-07 47.6 2.1 30 206-235 199-229 (229)
47 2nnz_A Hypothetical protein; b 93.6 0.081 2.8E-06 41.7 4.7 103 42-176 32-142 (153)
48 3pmp_A Cyclophilin A; peptidyl 92.7 0.053 1.8E-06 43.1 2.4 29 206-235 135-163 (164)
49 3kop_A Uncharacterized protein 92.4 1.4 4.8E-05 35.4 10.3 115 41-177 23-166 (188)
50 3rdd_A Peptidyl-prolyl CIS-tra 91.9 0.073 2.5E-06 43.2 2.4 29 206-235 155-183 (184)
51 2cmt_A Peptidyl-prolyl CIS-tra 91.8 0.085 2.9E-06 42.3 2.6 29 206-235 143-171 (172)
52 3k2c_A Peptidyl-prolyl CIS-tra 91.8 0.083 2.8E-06 43.2 2.5 30 206-236 160-191 (193)
53 2r99_A Peptidyl-prolyl CIS-tra 91.7 0.081 2.8E-06 42.5 2.4 29 206-235 144-172 (173)
54 2igv_A Peptidyl-prolyl CIS-tra 91.6 0.081 2.8E-06 42.4 2.3 30 206-236 143-172 (173)
55 2z6w_A Peptidyl-prolyl CIS-tra 91.2 0.09 3.1E-06 41.8 2.2 30 206-236 136-165 (165)
56 2poy_A Peptidyl-prolyl CIS-tra 91.0 0.096 3.3E-06 42.6 2.2 28 206-234 159-186 (186)
57 2poe_A Cyclophilin-like protei 90.7 0.094 3.2E-06 42.6 1.9 35 206-242 145-179 (185)
58 2ose_A Probable peptidyl-proly 89.6 0.14 4.6E-06 43.2 2.0 32 206-237 177-208 (234)
59 1w74_A Peptidyl-prolyl CIS-tra 88.8 0.18 6.1E-06 41.1 2.1 30 206-235 162-191 (191)
60 3bo7_A Peptidyl-prolyl CIS-tra 88.2 0.17 5.9E-06 41.5 1.7 31 206-236 143-173 (201)
61 2ok3_A Peptidyl-prolyl CIS-tra 85.8 0.29 1E-05 38.6 1.7 34 206-241 125-159 (161)
62 2hq6_A Serologically defined c 84.5 0.38 1.3E-05 38.9 1.8 27 209-235 153-179 (185)
63 2x7k_A Peptidyl-prolyl CIS-tra 84.3 0.47 1.6E-05 37.7 2.3 30 206-235 136-165 (166)
64 2b71_A Cyclophilin-like protei 83.5 0.52 1.8E-05 38.5 2.3 31 206-236 163-193 (196)
65 1zkc_A Peptidyl-prolyl CIS-tra 83.2 0.43 1.5E-05 39.0 1.6 31 206-236 144-175 (197)
66 2k7n_A Peptidyl-prolyl CIS-tra 83.2 0.25 8.5E-06 40.7 0.2 33 206-238 136-168 (203)
67 3s6m_A Peptidyl-prolyl CIS-tra 81.3 0.65 2.2E-05 36.8 2.0 30 206-235 134-167 (167)
68 1lop_A Cyclophilin A; rotamase 79.6 0.28 9.5E-06 38.9 -0.7 31 206-236 130-164 (164)
69 2fu0_A Cyclophilin, putative; 77.7 0.85 2.9E-05 35.9 1.6 30 206-235 130-159 (160)
70 1zx8_A Hypothetical protein TM 72.8 11 0.00038 28.7 6.7 95 51-176 21-123 (136)
71 1v9t_A Cyclophilin B; beta bar 70.9 0.53 1.8E-05 37.3 -1.2 31 206-236 132-166 (166)
72 1ihg_A Cyclophilin 40; ppiase 69.3 1.5 5E-05 38.7 1.2 37 206-243 156-192 (370)
73 3bkp_A Cyclophilin; malaria, i 67.7 1.4 4.8E-05 36.8 0.7 28 209-236 166-193 (232)
74 2a2n_A Peptidylprolyl isomeras 64.4 2.8 9.7E-05 33.4 1.8 28 206-233 146-174 (176)
75 4i62_A Amino acid ABC transpor 39.3 4.7 0.00016 32.4 -0.8 16 51-66 38-53 (269)
76 4ank_A Transthyretin; hormone 22.2 28 0.00096 26.8 1.0 15 46-60 40-54 (147)
77 2a3m_A COG3005: nitrate/TMAO r 22.1 21 0.00073 26.6 0.3 8 5-12 1-8 (130)
78 2k9u_B Filamin-binding LIM pro 22.0 51 0.0018 17.4 1.7 14 140-153 7-20 (26)
79 3c75_A Amicyanin; copper prote 20.4 39 0.0013 25.0 1.5 18 1-18 1-18 (132)
No 1
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.6e-56 Score=370.95 Aligned_cols=181 Identities=66% Similarity=1.171 Sum_probs=169.4
Q ss_pred hhhhcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCC
Q psy10359 27 NEKVAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDG 106 (249)
Q Consensus 27 ~~~~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~ 106 (249)
++..+..|.++++|||||++++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||+..+++
T Consensus 5 ~~~~~~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 84 (188)
T 3ich_A 5 SDEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDG 84 (188)
T ss_dssp ----CCSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCCCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCC
Confidence 44566778999999999999999999999999999999999999999987668889999999999999999999877889
Q ss_pred CCCCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCC
Q psy10359 107 TGGASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDR 186 (249)
Q Consensus 107 ~~~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~ 186 (249)
.|+.++|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++||+||++|++++++.+++
T Consensus 85 ~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~ 164 (188)
T 3ich_A 85 TGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDK 164 (188)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred cccceEEeeeeeeccCCCchh
Q psy10359 187 PVQGVTIVDCGHTPVEEPFSD 207 (249)
Q Consensus 187 P~~~i~I~~cg~l~~~~p~~~ 207 (249)
|.++|+|.+||++..++||.+
T Consensus 165 P~~~v~I~~~~~l~~~~Pf~~ 185 (188)
T 3ich_A 165 PLKDVIIADCGKIEVEKPFAI 185 (188)
T ss_dssp BSSCEEEEEEEEEEEEEEEEC
T ss_pred ECCCEEEEEeEEEecCCCCCC
Confidence 999999999999988889874
No 2
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.2e-56 Score=370.24 Aligned_cols=179 Identities=67% Similarity=1.211 Sum_probs=166.4
Q ss_pred hhhcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCC
Q psy10359 28 EKVAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGT 107 (249)
Q Consensus 28 ~~~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 107 (249)
+.++.+|+++++|||||++++++.|+|+||||++.||+||+||++||++++|++|+|+.|||++|+||+||||+..+++.
T Consensus 3 ~~~~~~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 82 (185)
T 4fru_A 3 DEKKKGPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGT 82 (185)
T ss_dssp CGGGEEEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CccCCCCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCC
Confidence 34556789999999999999999999999999999999999999999986664499999999999999999999988999
Q ss_pred CCCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCc
Q psy10359 108 GGASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRP 187 (249)
Q Consensus 108 ~~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P 187 (249)
++.++|+..+++|+..++|+++|+|||||.++++|+|||||++.++++||++|+|||||++|||||++|++++++.+++|
T Consensus 83 gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P 162 (185)
T 4fru_A 83 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKP 162 (185)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887888
Q ss_pred ccceEEeeeeeeccCCCch
Q psy10359 188 VQGVTIVDCGHTPVEEPFS 206 (249)
Q Consensus 188 ~~~i~I~~cg~l~~~~p~~ 206 (249)
.++|+|.+||++..++||.
T Consensus 163 ~~~v~I~~~g~l~~~~Pf~ 181 (185)
T 4fru_A 163 LKDVTIADCGKIEVEKPFA 181 (185)
T ss_dssp SSCEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEceEEecCCCCc
Confidence 8888888888887777764
No 3
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.5e-54 Score=355.45 Aligned_cols=167 Identities=59% Similarity=0.988 Sum_probs=159.9
Q ss_pred CCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCc
Q psy10359 32 KGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGAS 111 (249)
Q Consensus 32 ~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~ 111 (249)
.+|.++++|||||++++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||+..+++.|+.+
T Consensus 6 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s 85 (172)
T 2haq_A 6 HEPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKS 85 (172)
T ss_dssp -CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCC
T ss_pred CCCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCcc
Confidence 46888999999999999999999999999999999999999998777888999999999999999999987788999999
Q ss_pred cCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccce
Q psy10359 112 IYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGV 191 (249)
Q Consensus 112 ~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i 191 (249)
+|+..|++|+..++|. +|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++.+++|.++|
T Consensus 86 i~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v 164 (172)
T 2haq_A 86 IYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPV 164 (172)
T ss_dssp SSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCE
T ss_pred ccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCe
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EEeeeeee
Q psy10359 192 TIVDCGHT 199 (249)
Q Consensus 192 ~I~~cg~l 199 (249)
+|.+||+|
T Consensus 165 ~I~~~g~l 172 (172)
T 2haq_A 165 KIVASGEL 172 (172)
T ss_dssp EEEEEEEC
T ss_pred EEEEeEEC
Confidence 99999985
No 4
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.6e-53 Score=349.78 Aligned_cols=165 Identities=52% Similarity=0.889 Sum_probs=156.5
Q ss_pred CCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccC
Q psy10359 34 PKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIY 113 (249)
Q Consensus 34 ~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~ 113 (249)
+..+++|||||++++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||+..+++.|+.++|
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~ 86 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIY 86 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccC
Confidence 45678999999999999999999999999999999999999986677799999999999999999999888889999999
Q ss_pred CCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEE
Q psy10359 114 GDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTI 193 (249)
Q Consensus 114 ~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I 193 (249)
+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||+|++|||||++|++++++ +++|.++|+|
T Consensus 87 g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I 165 (172)
T 2cmt_A 87 GRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSK-SGKVKEPVII 165 (172)
T ss_dssp BSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCT-TCCCSSCEEE
T ss_pred CCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999885 6899999999
Q ss_pred eeeeee
Q psy10359 194 VDCGHT 199 (249)
Q Consensus 194 ~~cg~l 199 (249)
.+||+|
T Consensus 166 ~~~g~l 171 (172)
T 2cmt_A 166 SRCGEL 171 (172)
T ss_dssp EEEEEE
T ss_pred EEeEeE
Confidence 999997
No 5
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.4e-53 Score=350.49 Aligned_cols=164 Identities=50% Similarity=0.857 Sum_probs=156.4
Q ss_pred cccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCC---------CccCCCEEEEeecCceeeecCCCCCCC
Q psy10359 36 VTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEG---------QGYKGSKFHRVIKDFMIQGGDYTKGDG 106 (249)
Q Consensus 36 ~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g---------~~Y~g~~f~ri~~~~~iq~Gd~~~~~~ 106 (249)
.+++|||||++++++.|+|+||||++.||+||+||++||++..| + |+|+.|||++|+||+||||++.+++
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g 83 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNFMIQGGDFTKGDG 83 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTTEEEECCCSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCCEEEeCCccCCCC
Confidence 46799999999999999999999999999999999999986332 4 9999999999999999999988889
Q ss_pred CCCCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCC
Q psy10359 107 TGGASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDR 186 (249)
Q Consensus 107 ~~~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~ 186 (249)
.|+.++|+..|++|++.++|+++|+|||||.+|++|+|||||++.+++|||++|+|||||++|||||++|++++++.+++
T Consensus 84 ~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~ 163 (177)
T 1a58_A 84 TGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNR 163 (177)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred cccceEEeeeeeec
Q psy10359 187 PVQGVTIVDCGHTP 200 (249)
Q Consensus 187 P~~~i~I~~cg~l~ 200 (249)
|.++|+|.+||+|.
T Consensus 164 P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 164 PLADVVILNCGELV 177 (177)
T ss_dssp BSSCEEEEEEEEEC
T ss_pred CCCCeEEEEeEEEC
Confidence 99999999999973
No 6
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.4e-53 Score=350.98 Aligned_cols=164 Identities=49% Similarity=0.853 Sum_probs=155.9
Q ss_pred CcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCC---------CCccCCCEEEEeecCceeeecCCCCCC
Q psy10359 35 KVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPE---------GQGYKGSKFHRVIKDFMIQGGDYTKGD 105 (249)
Q Consensus 35 ~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~---------g~~Y~g~~f~ri~~~~~iq~Gd~~~~~ 105 (249)
..+++|||||++++|+.|+|+||||++.||+||+||++||++.. ++ |+|+.|||++|+|||||||++.++
T Consensus 7 ~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 7 VQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCCEEEcccccCCC
Confidence 34789999999999999999999999999999999999998643 34 999999999999999999998888
Q ss_pred CCCCCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCC
Q psy10359 106 GTGGASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRD 185 (249)
Q Consensus 106 ~~~~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~ 185 (249)
+.++.++|+..|++|++.++|+++|+|||||.+|++|+|||||++.+++|||++|+|||||++|||||++|++++++.++
T Consensus 86 g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~ 165 (179)
T 2wfi_A 86 GRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAAS 165 (179)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTS
T ss_pred CCCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CcccceEEeeeeee
Q psy10359 186 RPVQGVTIVDCGHT 199 (249)
Q Consensus 186 ~P~~~i~I~~cg~l 199 (249)
+|.++|+|.+||+|
T Consensus 166 ~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 166 KPFAEVRILSCGEL 179 (179)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999985
No 7
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.8e-53 Score=348.74 Aligned_cols=166 Identities=51% Similarity=0.893 Sum_probs=156.0
Q ss_pred CCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCcc
Q psy10359 33 GPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASI 112 (249)
Q Consensus 33 ~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~ 112 (249)
....+++||||+++++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||+..+++.|+.++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (173)
T 2r99_A 7 KARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSI 86 (173)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred cccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCcc
Confidence 34457899999999999999999999999999999999999987667779999999999999999999988888999999
Q ss_pred CCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceE
Q psy10359 113 YGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVT 192 (249)
Q Consensus 113 ~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~ 192 (249)
|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++ +++|.++|+
T Consensus 87 ~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~ 165 (173)
T 2r99_A 87 YGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVI 165 (173)
T ss_dssp TBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEE
T ss_pred CCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876 589999999
Q ss_pred Eeeeeee
Q psy10359 193 IVDCGHT 199 (249)
Q Consensus 193 I~~cg~l 199 (249)
|.+||+|
T Consensus 166 I~~cG~l 172 (173)
T 2r99_A 166 IADCGEY 172 (173)
T ss_dssp EEEEEEC
T ss_pred EEEeeeE
Confidence 9999987
No 8
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=3e-53 Score=346.25 Aligned_cols=162 Identities=52% Similarity=0.897 Sum_probs=155.4
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDK 116 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 116 (249)
+++|||||++++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||++.+++.|+.++|+..
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 82 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR 82 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence 67999999999999999999999999999999999999976688899999999999999999999888889999999999
Q ss_pred CCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEeee
Q psy10359 117 FEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVDC 196 (249)
Q Consensus 117 ~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~c 196 (249)
|++|+..++|.++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|+++++ .+++|.++|+|.+|
T Consensus 83 f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~~ 161 (165)
T 2z6w_A 83 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVITDC 161 (165)
T ss_dssp BCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEE
T ss_pred ccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999985 57899999999999
Q ss_pred eee
Q psy10359 197 GHT 199 (249)
Q Consensus 197 g~l 199 (249)
|++
T Consensus 162 g~l 164 (165)
T 2z6w_A 162 GQL 164 (165)
T ss_dssp EEC
T ss_pred EEE
Confidence 987
No 9
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=2.9e-53 Score=346.19 Aligned_cols=162 Identities=54% Similarity=0.922 Sum_probs=156.3
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDK 116 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 116 (249)
+++|||||.+++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||+..+++.++.++|+..
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 81 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEK 81 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcc
Confidence 57899999999999999999999999999999999999977788899999999999999999998878899999999999
Q ss_pred CCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEeee
Q psy10359 117 FEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVDC 196 (249)
Q Consensus 117 ~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~c 196 (249)
+++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++ +++|.++|+|.+|
T Consensus 82 ~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~c 160 (164)
T 3pmp_A 82 FADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITDC 160 (164)
T ss_dssp BCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEE
T ss_pred ccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999999987 7899999999999
Q ss_pred eee
Q psy10359 197 GHT 199 (249)
Q Consensus 197 g~l 199 (249)
|+|
T Consensus 161 g~l 163 (164)
T 3pmp_A 161 GTV 163 (164)
T ss_dssp EEC
T ss_pred eEE
Confidence 997
No 10
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-53 Score=351.36 Aligned_cols=166 Identities=51% Similarity=0.860 Sum_probs=156.5
Q ss_pred CCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCC---------CCccCCCEEEEeecCceeeecCCCCC
Q psy10359 34 PKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPE---------GQGYKGSKFHRVIKDFMIQGGDYTKG 104 (249)
Q Consensus 34 ~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~---------g~~Y~g~~f~ri~~~~~iq~Gd~~~~ 104 (249)
...+++|||||++++|+.|+|+||||++.||+||+||++||++.. ++ |+|+.|||++|+|||||||+..+
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgGd~~~~ 94 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGGDFSEG 94 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCCEEEcCcccCC
Confidence 457889999999999999999999999999999999999998643 34 99999999999999999999888
Q ss_pred CCCCCCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCC
Q psy10359 105 DGTGGASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGR 184 (249)
Q Consensus 105 ~~~~~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~ 184 (249)
++.++.++|+..|++|++.++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++.+
T Consensus 95 ~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~ 174 (192)
T 2he9_A 95 NGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAA 174 (192)
T ss_dssp SSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTT
T ss_pred CCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCcccceEEeeeeeec
Q psy10359 185 DRPVQGVTIVDCGHTP 200 (249)
Q Consensus 185 ~~P~~~i~I~~cg~l~ 200 (249)
++|.++|+|.+||++.
T Consensus 175 ~~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 175 SRPYADVRVIDCGVLA 190 (192)
T ss_dssp SCBSSCEEEEEEEECC
T ss_pred CCCcCCeEEEEeEEEc
Confidence 9999999999999984
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=4.5e-53 Score=348.68 Aligned_cols=165 Identities=53% Similarity=0.919 Sum_probs=156.8
Q ss_pred CcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCC-----ccCCCEEEEeecCceeeecCCCCCCCCCC
Q psy10359 35 KVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQ-----GYKGSKFHRVIKDFMIQGGDYTKGDGTGG 109 (249)
Q Consensus 35 ~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~-----~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 109 (249)
+.+++||||+++++|+.|+|+||||++.||+||+||++||++++|. +|+|+.|||++|+||+||||+..+++.|+
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 87 (177)
T 1mzw_A 8 PVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGV 87 (177)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCC
T ss_pred CCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCC
Confidence 4578999999999999999999999999999999999999995421 39999999999999999999988889999
Q ss_pred CccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCccc
Q psy10359 110 ASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQ 189 (249)
Q Consensus 110 ~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~ 189 (249)
.++|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++.+++|.+
T Consensus 88 ~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 167 (177)
T 1mzw_A 88 ASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKL 167 (177)
T ss_dssp CCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSS
T ss_pred CccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred ceEEeeeeee
Q psy10359 190 GVTIVDCGHT 199 (249)
Q Consensus 190 ~i~I~~cg~l 199 (249)
+|+|.+||+|
T Consensus 168 ~v~I~~cG~l 177 (177)
T 1mzw_A 168 PVVISQCGEM 177 (177)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEeceeC
Confidence 9999999986
No 12
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=4.1e-53 Score=347.01 Aligned_cols=162 Identities=50% Similarity=0.853 Sum_probs=154.3
Q ss_pred cccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCc-------cCCCEEEEeecCceeeecCCCCCCCCC
Q psy10359 36 VTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQG-------YKGSKFHRVIKDFMIQGGDYTKGDGTG 108 (249)
Q Consensus 36 ~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~-------Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 108 (249)
.+++||||+++++++.|+|+||||++.||+||+||++||++. |++ |+|+.|||++|+||+||||+..+++.|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 468999999999999999999999999999999999999854 554 999999999999999999998888999
Q ss_pred CCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcc
Q psy10359 109 GASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPV 188 (249)
Q Consensus 109 ~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~ 188 (249)
+.++|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|+++++ .+++|.
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~ 159 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVK 159 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred cceEEeeeeee
Q psy10359 189 QGVTIVDCGHT 199 (249)
Q Consensus 189 ~~i~I~~cg~l 199 (249)
++|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeceeC
Confidence 99999999985
No 13
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=6.5e-53 Score=346.69 Aligned_cols=164 Identities=55% Similarity=0.975 Sum_probs=155.3
Q ss_pred cccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCc-------cCCCEEEEeecCceeeecCCCCCCCCC
Q psy10359 36 VTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQG-------YKGSKFHRVIKDFMIQGGDYTKGDGTG 108 (249)
Q Consensus 36 ~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~-------Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 108 (249)
.+++||||+++++++.|+|+||||++.||+||+||++||++++|++ |+|+.|||++|+||+||||+..+++.|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 3679999999999999999999999999999999999999865532 999999999999999999998888999
Q ss_pred CCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcc
Q psy10359 109 GASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPV 188 (249)
Q Consensus 109 ~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~ 188 (249)
+.++|+..|++|+..++|+++|+|||||.+|++|+|||||++.+++|||++|+|||||++|||||++|++++++ +++|.
T Consensus 82 g~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~-~~~P~ 160 (173)
T 2igv_A 82 GESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQ-SGKPV 160 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TSCCS
T ss_pred CCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999884 68999
Q ss_pred cceEEeeeeeec
Q psy10359 189 QGVTIVDCGHTP 200 (249)
Q Consensus 189 ~~i~I~~cg~l~ 200 (249)
++|+|.+||++.
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEEEc
Confidence 999999999984
No 14
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=6.3e-53 Score=349.70 Aligned_cols=169 Identities=51% Similarity=0.879 Sum_probs=157.6
Q ss_pred hcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCC
Q psy10359 30 VAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGG 109 (249)
Q Consensus 30 ~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 109 (249)
..+.+..+++||||+++++++.|+|+||||++.||+||+||++||++++|++|+|+.|||++|+||+||||+..+++.++
T Consensus 15 ~~~~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 94 (184)
T 3rdd_A 15 LYFQGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGG 94 (184)
T ss_dssp ------CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCcccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCC
Confidence 34455678999999999999999999999999999999999999998888889999999999999999999888889999
Q ss_pred CccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCccc
Q psy10359 110 ASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQ 189 (249)
Q Consensus 110 ~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~ 189 (249)
.++|+..+++|+..++|+++|+||||+.+|++|+|||||++.++++||++|+|||||++|||||++|++++++ +++|.+
T Consensus 95 ~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~g~P~~ 173 (184)
T 3rdd_A 95 KSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSR-NGKTSK 173 (184)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TSCCSS
T ss_pred cccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCC-CCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999874 789999
Q ss_pred ceEEeeeeee
Q psy10359 190 GVTIVDCGHT 199 (249)
Q Consensus 190 ~i~I~~cg~l 199 (249)
+|+|.+||+|
T Consensus 174 ~v~I~~cG~l 183 (184)
T 3rdd_A 174 KITIADCGQL 183 (184)
T ss_dssp CEEEEEEEEC
T ss_pred CeEEEeCeEE
Confidence 9999999998
No 15
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=7.1e-53 Score=349.56 Aligned_cols=168 Identities=52% Similarity=0.872 Sum_probs=154.3
Q ss_pred hcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCc-------cCCCEEEEeecCceeeecCCC
Q psy10359 30 VAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQG-------YKGSKFHRVIKDFMIQGGDYT 102 (249)
Q Consensus 30 ~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~-------Y~g~~f~ri~~~~~iq~Gd~~ 102 (249)
.......+++||||+++++++.|+|+||||++.||+||+||++||+++.|++ |+|+.|||++|+||+||||+.
T Consensus 12 ~~~~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~ 91 (186)
T 2poy_A 12 ENLYFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFT 91 (186)
T ss_dssp ------CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTT
T ss_pred cccccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCC
Confidence 3444567889999999999999999999999999999999999998766775 999999999999999999998
Q ss_pred CCCCCCCCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCC
Q psy10359 103 KGDGTGGASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETD 182 (249)
Q Consensus 103 ~~~~~~~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~ 182 (249)
.+++.|+.++|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|+++++
T Consensus 92 ~~~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t- 170 (186)
T 2poy_A 92 RGDGTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS- 170 (186)
T ss_dssp TSSSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-
T ss_pred CCCCCCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcccceEEeeeee
Q psy10359 183 GRDRPVQGVTIVDCGH 198 (249)
Q Consensus 183 ~~~~P~~~i~I~~cg~ 198 (249)
.+++|.++|+|.+||+
T Consensus 171 ~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 171 QNGKPTKSVCITASGV 186 (186)
T ss_dssp TTSCCSSCEEEEEEEC
T ss_pred CCCCCCCCEEEEeCCC
Confidence 4789999999999995
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.3e-51 Score=344.04 Aligned_cols=165 Identities=51% Similarity=0.882 Sum_probs=157.3
Q ss_pred CcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCC
Q psy10359 35 KVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYG 114 (249)
Q Consensus 35 ~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 114 (249)
..+++|||||++++|+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+|++||||+..+++.++.++|+
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g 104 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYG 104 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCC
Confidence 45678999999999999999999999999999999999999877888999999999999999999988888999999999
Q ss_pred CCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcc--cceE
Q psy10359 115 DKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPV--QGVT 192 (249)
Q Consensus 115 ~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~--~~i~ 192 (249)
..+++|+..++|+++|+|||||.++++|+|||||++.++++||++|+|||||++|||||++|++++++ +++|. ++|+
T Consensus 105 ~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v~ 183 (193)
T 3k2c_A 105 EKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRIE 183 (193)
T ss_dssp SCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCEE
T ss_pred CcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 67999 9999
Q ss_pred Eeeeeeec
Q psy10359 193 IVDCGHTP 200 (249)
Q Consensus 193 I~~cg~l~ 200 (249)
|.+||+|.
T Consensus 184 I~~cG~l~ 191 (193)
T 3k2c_A 184 IRDCGVLG 191 (193)
T ss_dssp EEEEEECC
T ss_pred EEEceEeC
Confidence 99999984
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.1e-52 Score=342.25 Aligned_cols=163 Identities=55% Similarity=0.949 Sum_probs=124.9
Q ss_pred cccEEEEEEEEC--c---eeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCC
Q psy10359 36 VTDIVWFQIQIG--E---VNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGA 110 (249)
Q Consensus 36 ~t~~v~~di~i~--~---t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~ 110 (249)
+| +|||||+++ + |+.|+|+||||++.||+||+||++||+++.|++|+|+.|||++|+||+||||+..+++.|+.
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~ 80 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR 80 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc
Confidence 57 999999998 5 56699999999999999999999999987788899999999999999999997778889999
Q ss_pred ccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEc--cHHHHHHHHhCCCCCCC-Cc
Q psy10359 111 SIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVIT--GGDIVKKIESSETDGRD-RP 187 (249)
Q Consensus 111 ~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~--G~~vl~~I~~~~~~~~~-~P 187 (249)
++|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++ |||||++|++++++..+ +|
T Consensus 81 si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P 160 (172)
T 2c3b_A 81 SIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRS 160 (172)
T ss_dssp ------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCS
T ss_pred ccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccC
Confidence 9999999999989999999999999999999999999999999999999999999999 99999999999998655 99
Q ss_pred ccceEEeeeeee
Q psy10359 188 VQGVTIVDCGHT 199 (249)
Q Consensus 188 ~~~i~I~~cg~l 199 (249)
.++|+|.+||+|
T Consensus 161 ~~~v~I~~cG~l 172 (172)
T 2c3b_A 161 NTRPKIVNCGEL 172 (172)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999985
No 18
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-50 Score=344.92 Aligned_cols=164 Identities=46% Similarity=0.838 Sum_probs=155.8
Q ss_pred cccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCC-----ccCCCEEEEeecCceeeecCCCCCCCCCCC
Q psy10359 36 VTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQ-----GYKGSKFHRVIKDFMIQGGDYTKGDGTGGA 110 (249)
Q Consensus 36 ~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~-----~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~ 110 (249)
.+++||||+++++|+.|+|+||||++.||+||+||++||++++|. .|+|+.||||+|+|||||||++.+++.|+.
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~ 137 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSL 137 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCC
Confidence 478999999999999999999999999999999999999985431 399999999999999999999888899999
Q ss_pred ccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEE--ccHHHHHHHHhCCCCCC-CCc
Q psy10359 111 SIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVI--TGGDIVKKIESSETDGR-DRP 187 (249)
Q Consensus 111 ~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi--~G~~vl~~I~~~~~~~~-~~P 187 (249)
++|+..|++|+..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||+ +|||||++|++++++.+ ++|
T Consensus 138 siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P 217 (229)
T 1z81_A 138 SIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKP 217 (229)
T ss_dssp BTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCB
T ss_pred ccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999 99999999999999887 999
Q ss_pred ccceEEeeeeee
Q psy10359 188 VQGVTIVDCGHT 199 (249)
Q Consensus 188 ~~~i~I~~cg~l 199 (249)
.++|+|.+||+|
T Consensus 218 ~~~V~I~~cG~l 229 (229)
T 1z81_A 218 KIPINVVECGEL 229 (229)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999985
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.4e-50 Score=346.64 Aligned_cols=173 Identities=28% Similarity=0.468 Sum_probs=155.3
Q ss_pred CCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCC-----------C----C--CccCCCEEEEeecCc
Q psy10359 32 KGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRP-----------E----G--QGYKGSKFHRVIKDF 94 (249)
Q Consensus 32 ~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~-----------~----g--~~Y~g~~f~ri~~~~ 94 (249)
+....+++|||||++++|+.|+|+||||.+.||+||+||++||+++ . | ++|+|+.||||+|+|
T Consensus 9 p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F 88 (234)
T 2ose_A 9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN 88 (234)
T ss_dssp CCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT
T ss_pred CcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC
Confidence 4445688999999999999999999999999999999999999975 3 4 569999999999999
Q ss_pred eeeecCCCCCCCCCCCccCCCC-----CCCCcccCCCCcceEEEEec----CCCCCCCceEEEEcCC------CCCCCCC
Q psy10359 95 MIQGGDYTKGDGTGGASIYGDK-----FEDENFKLSHYGSGWLSMAN----AGKDTNGSQFFITTKK------TPWLDGR 159 (249)
Q Consensus 95 ~iq~Gd~~~~~~~~~~~~~~~~-----~~~e~~~~~h~~~G~vsm~~----~~~~~~~SqFfItl~~------~~~ld~~ 159 (249)
||||||+..+++.|+.++||.. |+ ++.++|+++|+||||| .+|++|+|||||++.+ ++|||++
T Consensus 89 miQgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~ 166 (234)
T 2ose_A 89 YIVSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRD 166 (234)
T ss_dssp EEEECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTT
T ss_pred EEEcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCC
Confidence 9999998778899999999987 66 4589999999999999 8999999999999999 9999999
Q ss_pred ceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEeeeeeeccCCCchhh
Q psy10359 160 HVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVDCGHTPVEEPFSDV 208 (249)
Q Consensus 160 ~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~cg~l~~~~p~~~v 208 (249)
|+|||||++|||||++|++++++.+++|.++|+|.+||++ .+||.+.
T Consensus 167 ~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l--~~p~~~~ 213 (234)
T 2ose_A 167 QVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAY--LDSSQAQ 213 (234)
T ss_dssp SEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEEC--CCHHHHC
T ss_pred eeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEe--cCCcccc
Confidence 9999999999999999999999988999999999999999 5677654
No 20
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.5e-50 Score=334.39 Aligned_cols=174 Identities=40% Similarity=0.704 Sum_probs=160.6
Q ss_pred hcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCC
Q psy10359 30 VAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGG 109 (249)
Q Consensus 30 ~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 109 (249)
+...|+....|.|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+. +++.|+
T Consensus 12 ~~~~~~~~~~v~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~~--g~-Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg 82 (197)
T 1zkc_A 12 SGLVPRGSGYVRLH-----TNKGDLNLELHCDLTPKTCENFIRLCKK--HY-YDGTIFHRSIRNFVIQGGDPT-GTGTGG 82 (197)
T ss_dssp CCCCCCSCEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHT--TT-TTTEEEEEEETTTEEEECCTT-SSSSCC
T ss_pred cCCCCCCCcEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHHhc--CC-CCCCEEEEEeCCCEEEcCCCC-CCCCCC
Confidence 34555556666666 9999999999999999999999999998 67 999999999999999999987 778889
Q ss_pred CccCCCCCCCCc-ccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCC-CCc
Q psy10359 110 ASIYGDKFEDEN-FKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGR-DRP 187 (249)
Q Consensus 110 ~~~~~~~~~~e~-~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~-~~P 187 (249)
.++||..|++|. ..++|+.+|+|||||.+|++|+|||||++.++++||++|+|||+|++|||||++|++++++.+ ++|
T Consensus 83 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P 162 (197)
T 1zkc_A 83 ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRP 162 (197)
T ss_dssp CBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCB
T ss_pred CccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCc
Confidence 999999999994 778999999999999999999999999999999999999999999999999999999999987 999
Q ss_pred ccceEEeeeeeeccCCCchhhhhhhcc
Q psy10359 188 VQGVTIVDCGHTPVEEPFSDVVKKIES 214 (249)
Q Consensus 188 ~~~i~I~~cg~l~~~~p~~~vv~~iE~ 214 (249)
..+|+|.+|+++ .+||.+..+++++
T Consensus 163 ~~~i~I~~~~v~--~dPf~d~~~~~~~ 187 (197)
T 1zkc_A 163 KEEIRIDATTVF--VDPYEEADAQIAQ 187 (197)
T ss_dssp SSCCEEEEEEEE--ECTTHHHHHHHHH
T ss_pred CCCeEEEEEEEE--cCCcccHHHHHHH
Confidence 999999999998 6899999888765
No 21
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2e-49 Score=328.73 Aligned_cols=153 Identities=42% Similarity=0.731 Sum_probs=144.4
Q ss_pred eeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCCCCCCc-ccCCCC
Q psy10359 49 VNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDKFEDEN-FKLSHY 127 (249)
Q Consensus 49 t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~-~~~~h~ 127 (249)
|+.|+|+||||++.||+||+||++||++ |+ |+|+.|||++|+||+||||+. +++.|+.++|+..|++|. ..++|+
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~ 98 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSAS--GY-YKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEIYPELKYD 98 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT--TT-TTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCCCTTSCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhcc--CC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccccCCCccC
Confidence 9999999999999999999999999999 66 999999999999999999988 778889999999999998 679999
Q ss_pred cceEEEEecCC----CCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEeeeeeeccCC
Q psy10359 128 GSGWLSMANAG----KDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVDCGHTPVEE 203 (249)
Q Consensus 128 ~~G~vsm~~~~----~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~cg~l~~~~ 203 (249)
++|+|||||.+ |++|+|||||++.++++||++|+|||||++||+||++|++++++.+++|.++|+|.+|+++ .|
T Consensus 99 ~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~--~d 176 (185)
T 2poe_A 99 RRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIH--SN 176 (185)
T ss_dssp STTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEE--CC
T ss_pred CCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEE--CC
Confidence 99999999999 9999999999999999999999999999999999999999999988999999999999999 68
Q ss_pred Cchh
Q psy10359 204 PFSD 207 (249)
Q Consensus 204 p~~~ 207 (249)
||.+
T Consensus 177 Pf~d 180 (185)
T 2poe_A 177 PIAD 180 (185)
T ss_dssp C---
T ss_pred CCCC
Confidence 9865
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.8e-49 Score=322.74 Aligned_cols=153 Identities=46% Similarity=0.746 Sum_probs=145.5
Q ss_pred eeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCCCCCCcc-cCCCC
Q psy10359 49 VNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDKFEDENF-KLSHY 127 (249)
Q Consensus 49 t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~-~~~h~ 127 (249)
|+.|+|+||||++.||+||+||++||++ |+ |+|+.|||++|+||+||||+. +++.|+.++|+..+++|.. .++|+
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~ 82 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCAS--NY-YNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEYSEYLKHN 82 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT--TT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCSC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhh--cc-cCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccccCcCcCcC
Confidence 9999999999999999999999999999 66 999999999999999999988 7788899999999999985 68999
Q ss_pred cceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCC-CCcccceEEeeeeeeccCCCch
Q psy10359 128 GSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGR-DRPVQGVTIVDCGHTPVEEPFS 206 (249)
Q Consensus 128 ~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~-~~P~~~i~I~~cg~l~~~~p~~ 206 (249)
++|+||||+.+|++|+|||||++.++++||++|+|||||++||+||++|++++++.+ ++|.++|+|.+|+++ .|||+
T Consensus 83 ~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~--~~Pf~ 160 (161)
T 2ok3_A 83 VRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH--ANPFA 160 (161)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEE--CCSCC
T ss_pred CCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEe--cCCCC
Confidence 999999999999999999999999999999999999999999999999999999887 999999999999998 68986
Q ss_pred h
Q psy10359 207 D 207 (249)
Q Consensus 207 ~ 207 (249)
+
T Consensus 161 d 161 (161)
T 2ok3_A 161 Q 161 (161)
T ss_dssp -
T ss_pred C
Confidence 4
No 23
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-49 Score=332.86 Aligned_cols=170 Identities=35% Similarity=0.573 Sum_probs=142.5
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeec-----CCCCCCCCCCCc
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGG-----DYTKGDGTGGAS 111 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~G-----d~~~~~~~~~~~ 111 (249)
+..|.|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||| |+. +++.|+.+
T Consensus 6 ~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~s 76 (201)
T 3bo7_A 6 KGYLRIV-----TTQGSLNIELHADMAPRACDSFLRLCAV--KY-FDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQS 76 (201)
T ss_dssp CEEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHT--TT-TTTCBEEEEETTTEEEECCGGGCCC--------CC
T ss_pred ceEEEEE-----eCCCCEEEEEcCCCCcHHHHHHHHHHhc--Cc-cCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCcc
Confidence 4445555 9999999999999999999999999999 66 999999999999999999 987 77888889
Q ss_pred cC-------CCCCCCCc-ccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCC
Q psy10359 112 IY-------GDKFEDEN-FKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDG 183 (249)
Q Consensus 112 ~~-------~~~~~~e~-~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~ 183 (249)
+| +..|++|. ..++|+.+|+||||+.+|++|+|||||++.++++||++|+|||+|++|||||++|++++++.
T Consensus 77 i~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 156 (201)
T 3bo7_A 77 PRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDK 156 (201)
T ss_dssp SSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCT
T ss_pred ccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCC
Confidence 98 88999994 67899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcccceEEeeeeeeccCCCchhhhhhhccccC
Q psy10359 184 RDRPVQGVTIVDCGHTPVEEPFSDVVKKIESSET 217 (249)
Q Consensus 184 ~~~P~~~i~I~~cg~l~~~~p~~~vv~~iE~~~~ 217 (249)
+++|.++|+|.+|+++ .+||.+..++++....
T Consensus 157 ~~~P~~~i~I~~~~v~--~dPf~d~~~~~~~~~~ 188 (201)
T 3bo7_A 157 KDKPLKPPKVEEIIVF--KNPFEDARKEMEDEKR 188 (201)
T ss_dssp TSCBSSCCBEEEEEEE--ECCC------------
T ss_pred CCCcCCCeEEEEEEEE--cCCccCHHHHHHHHHH
Confidence 9999999999999999 6899999887765443
No 24
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.4e-48 Score=318.77 Aligned_cols=155 Identities=52% Similarity=0.893 Sum_probs=146.8
Q ss_pred cccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCC
Q psy10359 36 VTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGD 115 (249)
Q Consensus 36 ~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~ 115 (249)
-+.+|.|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+. +++.++.++|+.
T Consensus 10 ~~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~ 80 (166)
T 2x7k_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELARR--GY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGK 80 (166)
T ss_dssp CCSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHH--TT-TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSS
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHHhc--CC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCC
Confidence 35678887 9999999999999999999999999998 66 999999999999999999987 778889999999
Q ss_pred CCCCCc-ccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEe
Q psy10359 116 KFEDEN-FKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIV 194 (249)
Q Consensus 116 ~~~~e~-~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~ 194 (249)
.|++|. ..++|.++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++.+++|.++|+|.
T Consensus 81 ~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~ 160 (166)
T 2x7k_A 81 QFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160 (166)
T ss_dssp CBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEE
T ss_pred ccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999998 4799998999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred eeeee
Q psy10359 195 DCGHT 199 (249)
Q Consensus 195 ~cg~l 199 (249)
+|.++
T Consensus 161 ~~~i~ 165 (166)
T 2x7k_A 161 KAYPS 165 (166)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99875
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-48 Score=324.12 Aligned_cols=157 Identities=41% Similarity=0.693 Sum_probs=145.8
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDK 116 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 116 (249)
+.+|.|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+. +++.|+.++||..
T Consensus 38 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~~--g~-Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~~ 108 (196)
T 2b71_A 38 RGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLCEM--GF-YDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGEY 108 (196)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHT--TT-TTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBSC
T ss_pred CcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHhhc--CC-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCc
Confidence 4678887 9999999999999999999999999999 66 999999999999999999987 7788899999999
Q ss_pred CCCCc-ccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEee
Q psy10359 117 FEDEN-FKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVD 195 (249)
Q Consensus 117 ~~~e~-~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~ 195 (249)
|++|. ..++|+++|+||||+.+|++|+|||||++.++++||++|+|||||++||+||++|++++++.+++|.++|+|.+
T Consensus 109 ~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 188 (196)
T 2b71_A 109 FEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILR 188 (196)
T ss_dssp BCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEE
T ss_pred ccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEE
Confidence 99995 57899999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred eeeeccCCC
Q psy10359 196 CGHTPVEEP 204 (249)
Q Consensus 196 cg~l~~~~p 204 (249)
|+++ .||
T Consensus 189 ~~i~--~dP 195 (196)
T 2b71_A 189 TSTA--VNA 195 (196)
T ss_dssp EEC------
T ss_pred EEEe--cCC
Confidence 9988 445
No 26
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-48 Score=315.33 Aligned_cols=154 Identities=49% Similarity=0.781 Sum_probs=145.1
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDK 116 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 116 (249)
...|.++ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+. +++.|+.++|+..
T Consensus 5 ~~~v~~~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~ 75 (160)
T 2fu0_A 5 PKSAIIY-----TTMGDIHISLFYKECKKTVQNFSVHSIN--GY-YNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNE 75 (160)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHT--TT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSC
T ss_pred CCEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHhcc--Cc-cCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCC
Confidence 3456666 9999999999999999999999999999 66 999999999999999999986 7788899999999
Q ss_pred CCCCcc-cCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEee
Q psy10359 117 FEDENF-KLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVD 195 (249)
Q Consensus 117 ~~~e~~-~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~ 195 (249)
|++|.. .++|+++|+||||+.+|++|+|||||++.++++||++|+|||||++|||||++|++++++.+++|.++|+|.+
T Consensus 76 ~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 155 (160)
T 2fu0_A 76 FEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILN 155 (160)
T ss_dssp BCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEE
T ss_pred ccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 999987 5899999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred eeee
Q psy10359 196 CGHT 199 (249)
Q Consensus 196 cg~l 199 (249)
|.++
T Consensus 156 ~~v~ 159 (160)
T 2fu0_A 156 IKIN 159 (160)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9875
No 27
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=5.2e-48 Score=320.11 Aligned_cols=166 Identities=38% Similarity=0.706 Sum_probs=152.7
Q ss_pred hcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCC
Q psy10359 30 VAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGG 109 (249)
Q Consensus 30 ~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 109 (249)
....|+.+.+|+|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+. +++.|+
T Consensus 17 ~~~~~~~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~~--g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg 87 (185)
T 2hq6_A 17 RGSEPPTNGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLCLE--AY-YDNTIFHRVVPGFIVQGGDPT-GTGSGG 87 (185)
T ss_dssp TTCCCCCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHHT--TT-TTTEECCEEETTTEEEECCTT-SSSSCC
T ss_pred cccCCCCCCEEEEE-----eCCccEEEEEeCCCCcHHHHHHHHHhhc--Cc-cCCCEEEEEECCCEEEcCCCC-CCCCCC
Confidence 34556678899998 8899999999999999999999999999 66 999999999999999999987 778888
Q ss_pred CccCCCCCCCCcc-cCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHH--HHHHHhCCCCCCCC
Q psy10359 110 ASIYGDKFEDENF-KLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDI--VKKIESSETDGRDR 186 (249)
Q Consensus 110 ~~~~~~~~~~e~~-~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~v--l~~I~~~~~~~~~~ 186 (249)
.++|+..|++|.. .++|+++|+|||||.++++|+|||||++.++++||++|+|||||+ |+++ +++|++++++.+++
T Consensus 88 ~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~ 166 (185)
T 2hq6_A 88 ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDER 166 (185)
T ss_dssp CCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSC
T ss_pred CcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCC
Confidence 9999999999986 688999999999999999999999999999999999999999999 8876 47899999998999
Q ss_pred cccceEEeeeeeeccCCCchh
Q psy10359 187 PVQGVTIVDCGHTPVEEPFSD 207 (249)
Q Consensus 187 P~~~i~I~~cg~l~~~~p~~~ 207 (249)
|.++|+|.+|+++ .|||++
T Consensus 167 P~~~v~I~~~~v~--~~Pf~d 185 (185)
T 2hq6_A 167 PHNPHKIKSCEVL--FNPFDD 185 (185)
T ss_dssp BSSCCEEEEEEEE--ECTTC-
T ss_pred CCCCeEEEEEEEe--CCCCCC
Confidence 9999999999999 689864
No 28
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-47 Score=315.30 Aligned_cols=153 Identities=46% Similarity=0.793 Sum_probs=143.3
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDK 116 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 116 (249)
...|.++ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+. +++.|+.++|+..
T Consensus 21 ~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~ 91 (176)
T 2a2n_A 21 SDSAIIH-----TSMGDIHTKLFPVECPKTVENFCVHSRN--GY-YNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGE 91 (176)
T ss_dssp CSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHT--TT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSC
T ss_pred CCEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHhhc--Cc-cCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCc
Confidence 4455665 9999999999999999999999999999 66 999999999999999999986 6788899999999
Q ss_pred CCCCcc-cCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCC-CCCCcccceEEe
Q psy10359 117 FEDENF-KLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETD-GRDRPVQGVTIV 194 (249)
Q Consensus 117 ~~~e~~-~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~-~~~~P~~~i~I~ 194 (249)
|++|.. .++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++ .+++|.++|+|.
T Consensus 92 ~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~ 171 (176)
T 2a2n_A 92 FEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSII 171 (176)
T ss_dssp BCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEE
T ss_pred cccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEE
Confidence 999987 599999999999999999999999999999999999999999999999999999999998 689999999999
Q ss_pred eeee
Q psy10359 195 DCGH 198 (249)
Q Consensus 195 ~cg~ 198 (249)
+|.+
T Consensus 172 ~v~v 175 (176)
T 2a2n_A 172 NITV 175 (176)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=320.20 Aligned_cols=156 Identities=52% Similarity=0.884 Sum_probs=147.6
Q ss_pred cccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCC
Q psy10359 36 VTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGD 115 (249)
Q Consensus 36 ~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~ 115 (249)
-+.+|.|+ |+.|+|+||||++.||+||+||++||+. |+ |+++.|||++|+||+||||+. +++.++.++|+.
T Consensus 10 ~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~~--g~-Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~ 80 (203)
T 2k7n_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELARR--GY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGK 80 (203)
T ss_dssp CCSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHHHH--TC-GGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCS
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHHhc--Cc-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCC
Confidence 35678888 9999999999999999999999999998 66 999999999999999999987 678888999999
Q ss_pred CCCCCc-ccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEe
Q psy10359 116 KFEDEN-FKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIV 194 (249)
Q Consensus 116 ~~~~e~-~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~ 194 (249)
.|++|. ..++|.++|+|||||.+|++|+|||||++.++++||++|+|||||++|||||++|++++++.+++|.++|+|.
T Consensus 81 ~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~ 160 (203)
T 2k7n_A 81 QFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160 (203)
T ss_dssp CBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEE
T ss_pred cccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999998 4799998999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred eeeeec
Q psy10359 195 DCGHTP 200 (249)
Q Consensus 195 ~cg~l~ 200 (249)
+|+++.
T Consensus 161 ~~~v~~ 166 (203)
T 2k7n_A 161 KAYPSG 166 (203)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 999984
No 30
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=4e-47 Score=346.07 Aligned_cols=167 Identities=51% Similarity=0.894 Sum_probs=157.9
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCC--------ccCCCEEEEeecCceeeecCCCCCCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQ--------GYKGSKFHRVIKDFMIQGGDYTKGDGTG 108 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~--------~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 108 (249)
+++||||+++++++.|+|+||||++.||+||+||++||++..|+ .|+|+.||||+|+|||||||++.++|.|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999985432 3999999999999999999999889999
Q ss_pred CCccCCCCCCCCcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcc
Q psy10359 109 GASIYGDKFEDENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPV 188 (249)
Q Consensus 109 ~~~~~~~~~~~e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~ 188 (249)
+.++||..|++|+..++|+.+|+|||+|.+|++||||||||+.+++|||++|+|||+|++||+||++|++.+++. ++|.
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~ 173 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPA 173 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEES
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876 9999
Q ss_pred cceEEeeeeeeccCCC
Q psy10359 189 QGVTIVDCGHTPVEEP 204 (249)
Q Consensus 189 ~~i~I~~cg~l~~~~p 204 (249)
.+|+|.+||++....+
T Consensus 174 ~~v~I~~~g~l~~~~~ 189 (370)
T 1ihg_A 174 KLCVIAECGELKEGDD 189 (370)
T ss_dssp SCEEEEEEEEECTTCC
T ss_pred eeEEEEEEEEeccCcc
Confidence 9999999999965443
No 31
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-47 Score=327.79 Aligned_cols=175 Identities=33% Similarity=0.576 Sum_probs=158.5
Q ss_pred hhcCCCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCC
Q psy10359 29 KVAKGPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTG 108 (249)
Q Consensus 29 ~~~~~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 108 (249)
.....|+.+.+|+|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.||||+|+|||||||+. +++.|
T Consensus 13 ~~~~~p~~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~~--g~-Ydgt~FhRVi~~FmiQgGdp~-~~G~G 83 (232)
T 3bkp_A 13 NLYFQGSTRGKVVLH-----TSLGDLDVELWARECPLACRNFVQLCLE--GY-YVNTIFHRVVKDFIVQGGDPT-GTGRG 83 (232)
T ss_dssp GGGCCCSCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHHH--TT-TTTCBEEEEETTTEEEECCTT-SSSSC
T ss_pred cccccCCCCCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHhhc--Cc-cCCCEEEEEeCCCEEEcCCCC-CCCCC
Confidence 445567778899998 8999999999999999999999999999 66 999999999999999999988 77888
Q ss_pred CCccC--CCCCCCCcc-cCCCCcceEEEEecCCC--------------CCCCceEEEEcCCCCCCCCCceEEEEEEccHH
Q psy10359 109 GASIY--GDKFEDENF-KLSHYGSGWLSMANAGK--------------DTNGSQFFITTKKTPWLDGRHVVFGKVITGGD 171 (249)
Q Consensus 109 ~~~~~--~~~~~~e~~-~~~h~~~G~vsm~~~~~--------------~~~~SqFfItl~~~~~ld~~~~vFG~Vi~G~~ 171 (249)
+.++| +..|++|.. .++|+.+|+||||+.++ ++|+|||||++.++++||++|+|||+|+ ||+
T Consensus 84 g~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~ 162 (232)
T 3bkp_A 84 GADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHT 162 (232)
T ss_dssp CCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGG
T ss_pred CCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCc
Confidence 99999 899999985 68899999999999987 6999999999999999999999999999 776
Q ss_pred H--HHHHHhCCCCCCCCcccceEEeeeeeeccCCCchhhhhhhccc
Q psy10359 172 I--VKKIESSETDGRDRPVQGVTIVDCGHTPVEEPFSDVVKKIESS 215 (249)
Q Consensus 172 v--l~~I~~~~~~~~~~P~~~i~I~~cg~l~~~~p~~~vv~~iE~~ 215 (249)
| |++|++++++.+++|.++|+|.+|+++ .|||.+++.++...
T Consensus 163 v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl--~dPf~d~~~~~~~~ 206 (232)
T 3bkp_A 163 LYNLMKFNDLEVGKEDRPMTPPFIKSVDVL--WNPFEDLVPRRLPD 206 (232)
T ss_dssp HHHHHHHTTSCBCGGGCBSSCCBEEEEEEE--ECCCTTCCCSSCCC
T ss_pred hHHHHHHHcCCcCCCCCcCCCeEEEEEEEE--cCChhhhhhccccc
Confidence 5 899999999989999999999999999 68999998776543
No 32
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=5.4e-47 Score=315.32 Aligned_cols=157 Identities=48% Similarity=0.743 Sum_probs=141.3
Q ss_pred CCCcccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCC-------------CCccCCCEEEEeecCceeeec
Q psy10359 33 GPKVTDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPE-------------GQGYKGSKFHRVIKDFMIQGG 99 (249)
Q Consensus 33 ~~~~t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~-------------g~~Y~g~~f~ri~~~~~iq~G 99 (249)
.|+.+.+|.|+ |+.|+|+||||++.||+||+||++||+|.+ ++ |+|+.|||++|+||||||
T Consensus 19 ~~~~~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgG 92 (191)
T 1w74_A 19 SPLATATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGG 92 (191)
T ss_dssp --CCSEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEEC
T ss_pred CCCCCeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCCEEecC
Confidence 44556677776 999999999999999999999999996532 45 999999999999999999
Q ss_pred CCCCCCCCCCCccCCCCCCCCc-ccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCceEEEEEEc--cHHHHHHH
Q psy10359 100 DYTKGDGTGGASIYGDKFEDEN-FKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDGRHVVFGKVIT--GGDIVKKI 176 (249)
Q Consensus 100 d~~~~~~~~~~~~~~~~~~~e~-~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~~~~vFG~Vi~--G~~vl~~I 176 (249)
|+. +++.|+ ++..|++|. ..++|+++|+|||||.+|++|+|||||++.++++||++|+|||||++ ||+||++|
T Consensus 93 d~~-g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I 168 (191)
T 1w74_A 93 DPT-GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAI 168 (191)
T ss_dssp CTT-SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHH
T ss_pred CCC-CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHH
Confidence 975 566665 578899994 68999999999999999999999999999999999999999999999 99999999
Q ss_pred HhCCCCCCCCcccceEEeeeeee
Q psy10359 177 ESSETDGRDRPVQGVTIVDCGHT 199 (249)
Q Consensus 177 ~~~~~~~~~~P~~~i~I~~cg~l 199 (249)
++++++.+++|.++|+|.+|+++
T Consensus 169 ~~~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 169 SKTATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp HTSCBCTTSCBSSCCEEEEEEEC
T ss_pred HcCCcCCCCCcCCCeEEEEEEEC
Confidence 99999988999999999999874
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=2e-45 Score=300.37 Aligned_cols=152 Identities=33% Similarity=0.505 Sum_probs=136.3
Q ss_pred ccEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCC
Q psy10359 37 TDIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDK 116 (249)
Q Consensus 37 t~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 116 (249)
+++|+|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+....+ ...++.+
T Consensus 4 ~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~~ 72 (166)
T 1v9t_A 4 DPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYVNS--GF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNPP 72 (166)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHT--TT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCCC
T ss_pred CeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHhcc--CC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCCc
Confidence 4678888 9999999999999999999999999998 66 9999999999999999999875432 2345778
Q ss_pred CCCCcccCCCCcceEEEEecC-CCCCCCceEEEEcCCCCCCCCC-----ceEEEEEEccHHHHHHHHhCCCCC----CCC
Q psy10359 117 FEDENFKLSHYGSGWLSMANA-GKDTNGSQFFITTKKTPWLDGR-----HVVFGKVITGGDIVKKIESSETDG----RDR 186 (249)
Q Consensus 117 ~~~e~~~~~h~~~G~vsm~~~-~~~~~~SqFfItl~~~~~ld~~-----~~vFG~Vi~G~~vl~~I~~~~~~~----~~~ 186 (249)
|++|.....|+.+|+|||||. +|++|+|||||++.++++||++ |+|||||++|||||++|++++++. +++
T Consensus 73 ~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~ 152 (166)
T 1v9t_A 73 IKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNV 152 (166)
T ss_dssp BCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEE
T ss_pred ccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCC
Confidence 999987655667999999997 5999999999999999999998 999999999999999999999876 478
Q ss_pred cccceEEeeeeee
Q psy10359 187 PVQGVTIVDCGHT 199 (249)
Q Consensus 187 P~~~i~I~~cg~l 199 (249)
|.++|+|.+|+++
T Consensus 153 P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 153 PSKPVVILSATVL 165 (166)
T ss_dssp ESSCCBEEEEEEC
T ss_pred cCCCeEEEEEEEe
Confidence 9999999999876
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=1.9e-45 Score=300.04 Aligned_cols=144 Identities=33% Similarity=0.538 Sum_probs=131.7
Q ss_pred eeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCCCCCCccc-CCCC
Q psy10359 49 VNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDKFEDENFK-LSHY 127 (249)
Q Consensus 49 t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~~-~~h~ 127 (249)
|+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+||+||||+..+. +.+.++.+|++|... ++|
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~~- 78 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCRE--GF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNGLKN- 78 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHT--TT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSSCCC-
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHhc--CC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccccccccc-
Confidence 9999999999999999999999999998 67 999999999999999999987443 345678899999865 666
Q ss_pred cceEEEEecC-CCCCCCceEEEEcCCCCCCCCC--------ceEEEEEEccHHHHHHHHhCCCCC----CCCcccceEEe
Q psy10359 128 GSGWLSMANA-GKDTNGSQFFITTKKTPWLDGR--------HVVFGKVITGGDIVKKIESSETDG----RDRPVQGVTIV 194 (249)
Q Consensus 128 ~~G~vsm~~~-~~~~~~SqFfItl~~~~~ld~~--------~~vFG~Vi~G~~vl~~I~~~~~~~----~~~P~~~i~I~ 194 (249)
.+|+||||++ +|++|+|||||++.++++||++ |+|||||++|||||++|++++++. +++|.++|+|.
T Consensus 79 ~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~ 158 (164)
T 1lop_A 79 TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIE 158 (164)
T ss_dssp CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEE
T ss_pred CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEE
Confidence 5999999975 7999999999999999999998 999999999999999999999875 58999999999
Q ss_pred eeeee
Q psy10359 195 DCGHT 199 (249)
Q Consensus 195 ~cg~l 199 (249)
+|+++
T Consensus 159 ~~~v~ 163 (164)
T 1lop_A 159 SVTVS 163 (164)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99986
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=9.5e-45 Score=296.83 Aligned_cols=151 Identities=33% Similarity=0.523 Sum_probs=134.0
Q ss_pred cEEEEEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCCC
Q psy10359 38 DIVWFQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDKF 117 (249)
Q Consensus 38 ~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~ 117 (249)
++|.|+ |+.|+|+||||++.||+||+||++||+. |+ |+|+.|||++|+|||||||+..+.+ ...++.++
T Consensus 4 ~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~--g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~ 72 (167)
T 3s6m_A 4 SMVELH-----TNHGVIKLELDEAKAPKTVENFLNYVKK--GH-YDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPI 72 (167)
T ss_dssp CEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHH--TT-TTTEECCEEETTTEEEESSEETTTE---ECCCCCCB
T ss_pred cEEEEE-----eCCceEEEEEeCCCCcHHHHHHHHHhhh--cc-cCCCEeEEecCCcEEEeccccCCCC---CCCCCCcc
Confidence 456666 9999999999999999999999999999 66 9999999999999999999875432 23457788
Q ss_pred CCCcccCCCCcceEEEEec-CCCCCCCceEEEEcCCCCCCCCC--------ceEEEEEEccHHHHHHHHhCCCCC----C
Q psy10359 118 EDENFKLSHYGSGWLSMAN-AGKDTNGSQFFITTKKTPWLDGR--------HVVFGKVITGGDIVKKIESSETDG----R 184 (249)
Q Consensus 118 ~~e~~~~~h~~~G~vsm~~-~~~~~~~SqFfItl~~~~~ld~~--------~~vFG~Vi~G~~vl~~I~~~~~~~----~ 184 (249)
++|.....++.+|+||||| .+|++|+|||||++.++++||++ |+|||||++|||||++|+++++++ +
T Consensus 73 ~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~ 152 (167)
T 3s6m_A 73 ANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQ 152 (167)
T ss_dssp CCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CB
T ss_pred CCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccC
Confidence 8986543344799999999 57999999999999999999998 999999999999999999999987 6
Q ss_pred CCcccceEEeeeeee
Q psy10359 185 DRPVQGVTIVDCGHT 199 (249)
Q Consensus 185 ~~P~~~i~I~~cg~l 199 (249)
++|.++|+|.+|.++
T Consensus 153 ~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 153 DVPNDDVVIEKAVVV 167 (167)
T ss_dssp TCBSSCCEEEEEEEC
T ss_pred CCcCCCeEEEEEEEC
Confidence 899999999999875
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-38 Score=286.21 Aligned_cols=156 Identities=25% Similarity=0.440 Sum_probs=131.6
Q ss_pred hhcCCCCcccEEEEEEEEC-----ceeeeeEEEEEeCCCCcchHHHHHHhhcCCCCCccCCCEEEEeecCceeeecCCCC
Q psy10359 29 KVAKGPKVTDIVWFQIQIG-----EVNVGKIEIGLFGKTVPRTVQNFIELAKRPEGQGYKGSKFHRVIKDFMIQGGDYTK 103 (249)
Q Consensus 29 ~~~~~~~~t~~v~~di~i~-----~t~~G~i~ieL~~~~aP~t~~nF~~l~~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~ 103 (249)
.....|.++.++++++.+. .++.|+|+|+||++.||+||+||++||+. |+ |+|+.|||+ ++||+||||+.
T Consensus 160 ~y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~--Gf-YdGt~FHRV-~gFmIQgGDp~- 234 (369)
T 3rfy_A 160 EYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVER--HF-YDGMEIQRS-DGFVVQTGDPE- 234 (369)
T ss_dssp SCTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHT--TT-TTTEECEEE-EEEEECCCCCC-
T ss_pred hcccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhc--CC-cCCCeeeee-CCeeEecCCCC-
Confidence 3456677788888777754 23599999999999999999999999999 67 999999999 99999999997
Q ss_pred CCCCC---------------------CCccCCCCCCCCcc-----cCCCCcceEEEEecC--CCCCCCceEEEEc-----
Q psy10359 104 GDGTG---------------------GASIYGDKFEDENF-----KLSHYGSGWLSMANA--GKDTNGSQFFITT----- 150 (249)
Q Consensus 104 ~~~~~---------------------~~~~~~~~~~~e~~-----~~~h~~~G~vsm~~~--~~~~~~SqFfItl----- 150 (249)
+++.| +.++|+..+++|++ .++|+.+|+|||||. +||+|+|||||++
T Consensus 235 g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L 314 (369)
T 3rfy_A 235 GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESEL 314 (369)
T ss_dssp CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEE
T ss_pred CCCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEeccccc
Confidence 44444 35677788888754 688899999999998 8999999999999
Q ss_pred --CCCCCCCCCceEEEEEEccHHHHHHHHhCCCCCCCCcccceEEee
Q psy10359 151 --KKTPWLDGRHVVFGKVITGGDIVKKIESSETDGRDRPVQGVTIVD 195 (249)
Q Consensus 151 --~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~ 195 (249)
.+.+|||++|+|||+|++|||||++|++. -....|+|.+
T Consensus 315 ~~~~~~~LDgkytVFG~VveGmdVVdkI~~G------D~I~sv~I~~ 355 (369)
T 3rfy_A 315 TPSNSNILDGRYAVFGYVTDNEDFLADLKVG------DVIESIQVVS 355 (369)
T ss_dssp CSCCCSSSCSCEEEEEEEEESTTGGGGCCTT------CEEEEEEEEE
T ss_pred CCCCCcccCCCeeEEEEEecCHHHHHHHhCC------CceEEEEEec
Confidence 46899999999999999999999999873 2356666665
No 37
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=97.59 E-value=2.2e-05 Score=64.37 Aligned_cols=41 Identities=51% Similarity=1.010 Sum_probs=38.5
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCCcCceeeecC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPVEEPFSVEKD 246 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~~~~~~v~~~ 246 (249)
.+++++|++.+++.+++|.++|+|.+||+|+.++||.|++|
T Consensus 145 ~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~~~Pf~~~~~ 185 (185)
T 4fru_A 145 MEVVRKVETTKTDGRDKPLKDVTIADCGKIEVEKPFAIAKE 185 (185)
T ss_dssp HHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEEEEEECC
T ss_pred HHHHHHHHhCCCCCCCcCCCCEEEEEceEEecCCCCcccCC
Confidence 56899999999998899999999999999999999999986
No 38
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=96.78 E-value=0.00043 Score=56.78 Aligned_cols=41 Identities=49% Similarity=0.940 Sum_probs=37.6
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCCcCceeeecC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPVEEPFSVEKD 246 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~~~~~~v~~~ 246 (249)
.+++++|++.+++..++|.++|+|.+||+++.++||...|+
T Consensus 148 ~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l~~~~Pf~~~~~ 188 (188)
T 3ich_A 148 MEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE 188 (188)
T ss_dssp HHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHhCCcCCCCeECCCEEEEEeEEEecCCCCCCCCC
Confidence 57899999999998899999999999999999999998764
No 39
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=94.97 E-value=0.01 Score=48.02 Aligned_cols=30 Identities=37% Similarity=0.712 Sum_probs=27.8
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++.+++|.++|+|.+||+|
T Consensus 150 ~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 150 QEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp HHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred HHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 578999999999988999999999999986
No 40
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=94.64 E-value=0.013 Score=47.27 Aligned_cols=30 Identities=40% Similarity=0.748 Sum_probs=27.9
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++.+++|.++|+|.+||+|
T Consensus 147 ~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l 176 (177)
T 1a58_A 147 QEVVTKIEYLKTNSKNRPLADVVILNCGEL 176 (177)
T ss_dssp HHHHHHHHTSCBCTTSCBSSCEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCCCcCCCCeEEEEeEEE
Confidence 578999999999988999999999999987
No 41
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=94.55 E-value=0.016 Score=47.47 Aligned_cols=32 Identities=34% Similarity=0.683 Sum_probs=28.7
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPV 237 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~ 237 (249)
.+++++|++.+++.+++|.++|+|.+||+|..
T Consensus 160 mdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 160 FEVIEQIENLKTDAASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp HHHHHHHHTSCBCTTSCBSSCEEEEEEEECC-
T ss_pred HHHHHHHHcCCcCCCCCCcCCeEEEEeEEEcc
Confidence 56899999999998899999999999999863
No 42
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=94.47 E-value=0.012 Score=47.66 Aligned_cols=30 Identities=33% Similarity=0.477 Sum_probs=27.7
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++.+++|.++|+|.+||+|
T Consensus 148 ~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 148 LLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp HHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 578999999999888999999999999986
No 43
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=94.26 E-value=0.014 Score=47.00 Aligned_cols=30 Identities=47% Similarity=0.671 Sum_probs=27.6
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++..++|.++|+|.+||+|
T Consensus 143 ~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 143 MDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp HHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 568999999999888899999999999986
No 44
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=94.25 E-value=0.019 Score=46.16 Aligned_cols=30 Identities=33% Similarity=0.461 Sum_probs=26.7
Q ss_pred hhhhhhhccccCCCCC-CCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRD-RPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d-~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++..+ +|.++|+|.+||+|
T Consensus 142 ~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 142 YSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp HHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred HHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 4789999999988766 99999999999986
No 45
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=93.77 E-value=0.029 Score=45.00 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=26.1
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.++ .+++|.++|+|.+||+|
T Consensus 142 ~dvv~~I~~~~t-~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 142 MNVVREMEKEGA-KSGYVKRSVVITDCGEL 170 (170)
T ss_dssp HHHHHHHHTTCC-TTCCCSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCC-CCCCCCCCeEEEeceeC
Confidence 578999999998 56899999999999986
No 46
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=93.75 E-value=0.025 Score=47.59 Aligned_cols=30 Identities=27% Similarity=0.417 Sum_probs=26.9
Q ss_pred hhhhhhhccccCCCC-CCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGR-DRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~-d~P~~~v~i~~~g~l 235 (249)
.++|++|++.+++.+ ++|.++|+|.+||+|
T Consensus 199 mdVv~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 199 LLLLKKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp HHHHHHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 467899999999877 899999999999986
No 47
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=93.61 E-value=0.081 Score=41.67 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=60.1
Q ss_pred EEEEECceeeeeEEEEEeCCCCcchHHHHHHhhcC--CCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCCCCC
Q psy10359 42 FQIQIGEVNVGKIEIGLFGKTVPRTVQNFIELAKR--PEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDKFED 119 (249)
Q Consensus 42 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~l~~~--~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~ 119 (249)
+.|.+++ ..++++|+.+.||+||+.|+++.=- .-.. |.+-.++ ..|.. ...+
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~-~g~E~y~-~lp~~--------------------l~~~- 85 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALPIKSTANR-WGDEIYF-TTQVA--------------------VEKE- 85 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCSEEEEEEE-ETTEEEE-CCSCC--------------------CCCS-
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCCcEEEHHh-hCCcEEE-ECCCC--------------------CCCC-
Confidence 4455565 6699999999999999999997511 0000 2211111 11110 0011
Q ss_pred CcccCCCCcceEEEEecCCCCCCCceEEEEcCCCCCCCC------CceEEEEEEccHHHHHHH
Q psy10359 120 ENFKLSHYGSGWLSMANAGKDTNGSQFFITTKKTPWLDG------RHVVFGKVITGGDIVKKI 176 (249)
Q Consensus 120 e~~~~~h~~~G~vsm~~~~~~~~~SqFfItl~~~~~ld~------~~~vFG~Vi~G~~vl~~I 176 (249)
|+. .....+|-|+....+. .+.|-.++.|...+ .-.+||||++|++.|.++
T Consensus 86 en~-~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 86 ENS-KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp SCC-BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred CCC-cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 221 1233579998876543 37787887753222 358899999997766554
No 48
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=92.70 E-value=0.053 Score=43.13 Aligned_cols=29 Identities=28% Similarity=0.574 Sum_probs=26.0
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++ .++|.++|+|.+||+|
T Consensus 135 ~~vv~~I~~~~~~-~~~P~~~v~I~~cg~l 163 (164)
T 3pmp_A 135 LDIVRKVEGKGSA-SGKTNATIKITDCGTV 163 (164)
T ss_dssp HHHHHHHHTTCCT-TCCCSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCCC-CCCcccCEEEEeCeEE
Confidence 5689999998886 5899999999999987
No 49
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=92.40 E-value=1.4 Score=35.39 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=63.3
Q ss_pred EEEEEECceeee-eEEEEEeCCCCcchHHHHHHhhcCC----CCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCC
Q psy10359 41 WFQIQIGEVNVG-KIEIGLFGKTVPRTVQNFIELAKRP----EGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGD 115 (249)
Q Consensus 41 ~~di~i~~t~~G-~i~ieL~~~~aP~t~~nF~~l~~~~----~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~ 115 (249)
|+.|++. ..| .++.+|..+.||+||+.|+++.=-. +.. |.|..++-.+|.|-. .
T Consensus 23 ~i~itl~--~~g~~~~A~Lldd~APkTcaA~~~~LP~~~~viHar-wSGeeVy~~lp~f~~------------------~ 81 (188)
T 3kop_A 23 YINITLE--KRGVTCKALLLDDVAPRTSKAVWDALPQSSQVFHGK-YARNEIYNLVPAFAP------------------K 81 (188)
T ss_dssp EEEEEET--TTTEEEEEEECTTTSHHHHHHHHHHCCEEEECEECS-SSSSEEEEEEECCSS------------------S
T ss_pred EEEEEEe--cCCeEEEEEEccccChHHHHHHHHhCCCCcceEEEE-EecceEEEECCcccc------------------c
Confidence 4555543 344 3788999999999999999975110 011 555555544444311 1
Q ss_pred CCCCCcccCCCCcceEEEEecC-----C-------C------CCCCceEEEEcCCCCC-CCCC-----ceEEEEEEccHH
Q psy10359 116 KFEDENFKLSHYGSGWLSMANA-----G-------K------DTNGSQFFITTKKTPW-LDGR-----HVVFGKVITGGD 171 (249)
Q Consensus 116 ~~~~e~~~~~h~~~G~vsm~~~-----~-------~------~~~~SqFfItl~~~~~-ld~~-----~~vFG~Vi~G~~ 171 (249)
..+.||..... .+|-|++-.. | + .....++.|-.+.+.. +.++ -.+|++|++|+|
T Consensus 82 ~~g~EN~T~~P-~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~TIveGle 160 (188)
T 3kop_A 82 EPGAENTTVTP-IPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFATIVEGLD 160 (188)
T ss_dssp CCCSCSEESSC-CTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEEEEESHH
T ss_pred CCCcCCCCCCC-CCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEEEecCHH
Confidence 13334433322 3677776310 1 0 1112456666665442 2222 378999999998
Q ss_pred HHHHHH
Q psy10359 172 IVKKIE 177 (249)
Q Consensus 172 vl~~I~ 177 (249)
-+.++-
T Consensus 161 ~la~~c 166 (188)
T 3kop_A 161 EMAAAC 166 (188)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 775443
No 50
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=91.92 E-value=0.073 Score=43.18 Aligned_cols=29 Identities=24% Similarity=0.503 Sum_probs=25.5
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+|+++|++..++ +++|.++|+|.+||+|
T Consensus 155 ~dvv~~I~~~~~~-~g~P~~~v~I~~cG~l 183 (184)
T 3rdd_A 155 MNIVEAMERFGSR-NGKTSKKITIADCGQL 183 (184)
T ss_dssp HHHHHHHHTTCCT-TSCCSSCEEEEEEEEC
T ss_pred HHHHHHHHhcCCC-CCCCcCCeEEEeCeEE
Confidence 5689999988874 5899999999999997
No 51
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=91.83 E-value=0.085 Score=42.32 Aligned_cols=29 Identities=34% Similarity=0.494 Sum_probs=25.7
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++ +++|.++|+|.+||+|
T Consensus 143 ~dvv~~I~~~~~~-~~~P~~~v~I~~~g~l 171 (172)
T 2cmt_A 143 QNVVKKMESVGSK-SGKVKEPVIISRCGEL 171 (172)
T ss_dssp HHHHHHGGGGCCT-TCCCSSCEEEEEEEEE
T ss_pred HHHHHHHHhCCCC-CCCCCCCEEEEEeEeE
Confidence 5789999998885 5899999999999997
No 52
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=91.76 E-value=0.083 Score=43.20 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=26.6
Q ss_pred hhhhhhhccccCCCCCCCc--cceEEeecCccC
Q psy10359 206 SDVVKKIESSETDGRDRPV--QGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~--~~v~i~~~g~l~ 236 (249)
.+++++|++.+++ .++|. ++|+|.+||+|.
T Consensus 160 mdvv~~I~~~~t~-~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 160 MDVVHKIAKYGSE-SGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp HHHHHHHHTTCCT-TCCCCTTCCEEEEEEEECC
T ss_pred HHHHHHHHhcCCC-CCcCccCccEEEEEceEeC
Confidence 5689999998887 57999 999999999986
No 53
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=91.74 E-value=0.081 Score=42.47 Aligned_cols=29 Identities=38% Similarity=0.658 Sum_probs=25.6
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++..++ .++|.++|+|.+||+|
T Consensus 144 ~dvv~~I~~~~~~-~~~P~~~v~I~~cG~l 172 (173)
T 2r99_A 144 LDVLRQIEAQGSK-DGKPKQKVIIADCGEY 172 (173)
T ss_dssp HHHHHHHHTTCCT-TCCCSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCCC-CCCCCCCeEEEEeeeE
Confidence 5689999988875 4899999999999997
No 54
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=91.62 E-value=0.081 Score=42.45 Aligned_cols=30 Identities=40% Similarity=0.684 Sum_probs=26.2
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~ 236 (249)
.+++++|++.+++ +++|.++|+|.+||+|.
T Consensus 143 ~dvv~~I~~~~t~-~~~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 143 LDVVKAVESNGSQ-SGKPVKDCMIADCGQLK 172 (173)
T ss_dssp HHHHHHHHTTCCT-TSCCSSCEEEEEEEEEC
T ss_pred HHHHHHHHhCCCC-CCCCCCCEEEEEeEEEc
Confidence 5789999988884 58999999999999984
No 55
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=91.20 E-value=0.09 Score=41.83 Aligned_cols=30 Identities=43% Similarity=0.606 Sum_probs=25.7
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~ 236 (249)
.+++++|++.++ .+++|.++|+|.+||+|.
T Consensus 136 ~dvv~~I~~~~~-~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 136 MDVVKKIESFGS-KSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp HHHHHHHHHTCC-TTSCCSSCEEEEEEEECC
T ss_pred HHHHHHHHhCCC-CCCCCCCcEEEEEeEEEC
Confidence 468999998875 568999999999999983
No 56
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=91.03 E-value=0.096 Score=42.56 Aligned_cols=28 Identities=32% Similarity=0.521 Sum_probs=24.7
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGY 234 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~ 234 (249)
.++|++|++.++ .+++|.++|+|.+||+
T Consensus 159 mdvv~~I~~~~t-~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 159 MEVVKSIEKCGS-QNGKPTKSVCITASGV 186 (186)
T ss_dssp HHHHHHHHHTCC-TTSCCSSCEEEEEEEC
T ss_pred HHHHHHHHhCCC-CCCCCCCCEEEEeCCC
Confidence 578999999888 4589999999999996
No 57
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=90.75 E-value=0.094 Score=42.57 Aligned_cols=35 Identities=17% Similarity=0.414 Sum_probs=29.2
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCCcCcee
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPVEEPFS 242 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~~~~~~ 242 (249)
.++|++|++.+++.+++|.++|+|.+|+.+. .||.
T Consensus 145 mdvv~~I~~~~t~~~~~P~~~v~I~~~~i~~--dPf~ 179 (185)
T 2poe_A 145 FETLNTLENCPSDKSHKPIDEIIIKDIVIHS--NPIA 179 (185)
T ss_dssp HHHHHHHHHSCBCTTSCBSSCCEEEEEEEEC--CC--
T ss_pred HHHHHHHHhCCcCCCCCcCCCeEEEEEEEEC--CCCC
Confidence 5689999999998889999999999999983 4554
No 58
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=89.62 E-value=0.14 Score=43.19 Aligned_cols=32 Identities=28% Similarity=0.238 Sum_probs=29.2
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPV 237 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~ 237 (249)
.+||++|++.+++.+++|.++|+|.+||++..
T Consensus 177 mdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 177 LDVLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp HHHHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred HHHHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 57899999999998899999999999999954
No 59
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=88.78 E-value=0.18 Score=41.14 Aligned_cols=30 Identities=37% Similarity=0.537 Sum_probs=26.8
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.++|++|++.+++.+++|.++|+|.+|+.+
T Consensus 162 mdvv~~I~~~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 162 QRVVEAISKTATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp HHHHHHHHTSCBCTTSCBSSCCEEEEEEEC
T ss_pred HHHHHHHHcCCcCCCCCcCCCeEEEEEEEC
Confidence 468899999999888999999999999863
No 60
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=88.24 E-value=0.17 Score=41.50 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=28.4
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~ 236 (249)
.+++++|++.+++.+++|.++|+|.+|+.+.
T Consensus 143 mdvv~~I~~~~t~~~~~P~~~i~I~~~~v~~ 173 (201)
T 3bo7_A 143 LDVLRQWEKLETDKKDKPLKPPKVEEIIVFK 173 (201)
T ss_dssp HHHHHHHTTCCBCTTSCBSSCCBEEEEEEEE
T ss_pred HHHHHHHHhCCcCCCCCcCCCeEEEEEEEEc
Confidence 5789999999999889999999999999983
No 61
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=85.83 E-value=0.29 Score=38.65 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=29.2
Q ss_pred hhhhhhhccccCCCC-CCCccceEEeecCccCCcCce
Q psy10359 206 SDVVKKIESSETDGR-DRPVQGVTIVDCGYTPVEEPF 241 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~-d~P~~~v~i~~~g~l~~~~~~ 241 (249)
.+++++|++.+++.+ ++|.++|+|.+|+.+. .||
T Consensus 125 ~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~--~Pf 159 (161)
T 2ok3_A 125 LETLDELEKLPVNEKTYRPLNDVHIKDITIHA--NPF 159 (161)
T ss_dssp HHHHHHHHTCCBCTTTCCBSSCCBEEEEEEEC--CSC
T ss_pred HHHHHHHHhCCccCCCCCcCCCeEEEEEEEec--CCC
Confidence 468999999999877 8999999999999873 455
No 62
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=84.51 E-value=0.38 Score=38.93 Aligned_cols=27 Identities=19% Similarity=0.400 Sum_probs=23.9
Q ss_pred hhhhccccCCCCCCCccceEEeecCcc
Q psy10359 209 VKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 209 v~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
+.+|++.+++.+++|.++|+|.+|+.+
T Consensus 153 ~~~i~~~~~~~~~~P~~~v~I~~~~v~ 179 (185)
T 2hq6_A 153 MLRLSEVDIDDDERPHNPHKIKSCEVL 179 (185)
T ss_dssp HHHTTCSCBCTTSCBSSCCEEEEEEEE
T ss_pred hhHHhhCCcCCCCCCCCCeEEEEEEEe
Confidence 356888888888999999999999998
No 63
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=84.30 E-value=0.47 Score=37.65 Aligned_cols=30 Identities=30% Similarity=0.493 Sum_probs=26.9
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++.+++|.++|+|.+|..+
T Consensus 136 ~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 136 IGMVNRVGMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp HHHHHHHTTSCBCTTSCBSSCCEEEEEEEC
T ss_pred HHHHHHHHcCCcCCCCCcCCCeEEEEEEEe
Confidence 568999999999888999999999999764
No 64
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=83.46 E-value=0.52 Score=38.47 Aligned_cols=31 Identities=16% Similarity=0.332 Sum_probs=27.0
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~ 236 (249)
.+++++|++.+++.+++|.++|+|.+|+.+.
T Consensus 163 mdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~ 193 (196)
T 2b71_A 163 MTCIENIASVQTTATNKPIFDLKILRTSTAV 193 (196)
T ss_dssp HHHHHHHHTSCBCTTCCBSSCCEEEEEEC--
T ss_pred HHHHHHHHhCCcCCCCCCCCCeEEEEEEEec
Confidence 5689999999998889999999999999873
No 65
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=83.17 E-value=0.43 Score=39.03 Aligned_cols=31 Identities=29% Similarity=0.398 Sum_probs=27.8
Q ss_pred hhhhhhhccccCCCC-CCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDGR-DRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~-d~P~~~v~i~~~g~l~ 236 (249)
.+++++|++.+++.+ ++|.++|+|.+|+.+.
T Consensus 144 mdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~ 175 (197)
T 1zkc_A 144 FDVLTAMENVESDPKTDRPKEEIRIDATTVFV 175 (197)
T ss_dssp HHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEc
Confidence 468999999999877 8999999999999984
No 66
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=83.16 E-value=0.25 Score=40.66 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=29.2
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCCc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPVE 238 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~~ 238 (249)
.+++++|++.+++.+++|.++|+|.+|+.+...
T Consensus 136 mdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~~ 168 (203)
T 2k7n_A 136 IGMVNRVGMVETNSQDRPVDDVKIIKAYPSGGG 168 (203)
T ss_dssp HHHHHHHHSCCEEETTEECCCCBEEEEEECCCC
T ss_pred HHHHHHHHcCCcCCCCCcCCCeEEEEEEEEecC
Confidence 568999999999888999999999999998543
No 67
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=81.32 E-value=0.65 Score=36.76 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=25.9
Q ss_pred hhhhhhhccccCCC----CCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDG----RDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~----~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++. .++|.++|+|.+|..|
T Consensus 134 ~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 134 QDIVDKIKAVKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp HHHHHHHTTSCBBC---CBTCBSSCCEEEEEEEC
T ss_pred HHHHHHHHcCCcCCCcccCCCcCCCeEEEEEEEC
Confidence 46899999999886 6899999999998654
No 68
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=79.60 E-value=0.28 Score=38.88 Aligned_cols=31 Identities=29% Similarity=0.333 Sum_probs=26.4
Q ss_pred hhhhhhhccccCCC----CCCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDG----RDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~----~d~P~~~v~i~~~g~l~ 236 (249)
.++|++|++.+++. .++|.++|+|.+|+.++
T Consensus 130 ~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~v~~ 164 (164)
T 1lop_A 130 MDEVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE 164 (164)
T ss_dssp HHHHHHHHTSCEEEETTEEEEESSCCEEEEEEECC
T ss_pred HHHHHHHHhCCcCCccccCCCcCCCeEEEEEEEeC
Confidence 46899999998864 48999999999999763
No 69
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=77.67 E-value=0.85 Score=35.91 Aligned_cols=30 Identities=33% Similarity=0.588 Sum_probs=26.4
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCcc
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYT 235 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l 235 (249)
.+++++|++.+++..++|.++|+|.+|..+
T Consensus 130 ~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 130 SKIVLDIEKVRTDKRDKPLEDIKILNIKIN 159 (160)
T ss_dssp HHHHHHHHTSCBCTTSCBSSCCBEEEEEEC
T ss_pred HHHHHHHHhCCcCCCCCcCCCeEEEEEEEe
Confidence 478999999999888999999999998653
No 70
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=72.81 E-value=11 Score=28.70 Aligned_cols=95 Identities=24% Similarity=0.187 Sum_probs=55.6
Q ss_pred eeeEEEEEeCCCCcchHHHHHHhh--cCCCCCccCCCEEEEeecCceeeecCCCCCCCCCCCccCCCCCCCCcccCCCCc
Q psy10359 51 VGKIEIGLFGKTVPRTVQNFIELA--KRPEGQGYKGSKFHRVIKDFMIQGGDYTKGDGTGGASIYGDKFEDENFKLSHYG 128 (249)
Q Consensus 51 ~G~i~ieL~~~~aP~t~~nF~~l~--~~~~g~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~~~~h~~ 128 (249)
-..+..+|+.+ |.|++.|.++. ++.-.. |. ..++-..|... .. +|+.. .-..
T Consensus 21 ~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~-~g-~E~y~~~p~~l-~~--------------------~e~~~-~~~~ 74 (136)
T 1zx8_A 21 SGKCVIDLNEE--YEVVKLLKEKIPFESVVNT-WG-EEIYFSTPVNV-QK--------------------MENPR-EVVE 74 (136)
T ss_dssp SCEEEEEEETT--SHHHHHHHHHCSEEEECEE-SS-SEEEEECSCCC-CC--------------------CSSEE-SSBC
T ss_pred CcEEEEEEcCC--HHHHHHHHHHCCcEEEHHH-hC-CcEEEECCccC-CC--------------------CCCCC-ccCC
Confidence 35789999764 88999999884 111111 53 34443334321 00 01111 1124
Q ss_pred ceEEEEecCCCCCCCceEEEEcCCCCCCCC------CceEEEEEEccHHHHHHH
Q psy10359 129 SGWLSMANAGKDTNGSQFFITTKKTPWLDG------RHVVFGKVITGGDIVKKI 176 (249)
Q Consensus 129 ~G~vsm~~~~~~~~~SqFfItl~~~~~ld~------~~~vFG~Vi~G~~vl~~I 176 (249)
.|-|+....+. .|.|-.++.|...+ .-.++|||.+|++.+..+
T Consensus 75 ~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 75 IGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp TTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred CCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 78888876544 37777888753332 368999999997766554
No 71
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=70.85 E-value=0.53 Score=37.28 Aligned_cols=31 Identities=29% Similarity=0.419 Sum_probs=26.2
Q ss_pred hhhhhhhccccCCC----CCCCccceEEeecCccC
Q psy10359 206 SDVVKKIESSETDG----RDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 206 ~~vv~~iE~~~~~~----~d~P~~~v~i~~~g~l~ 236 (249)
.++|++|++.+++. .++|.++|+|.+|+.++
T Consensus 132 ~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 132 MDVADKISQVPTHDVGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp HHHHHHHHTSCEEEETTEEEEESSCCBEEEEEECC
T ss_pred HHHHHHHHhCCCCCCCccCCCcCCCeEEEEEEEeC
Confidence 46899999998865 47999999999998763
No 72
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=69.28 E-value=1.5 Score=38.71 Aligned_cols=37 Identities=24% Similarity=0.516 Sum_probs=30.6
Q ss_pred hhhhhhhccccCCCCCCCccceEEeecCccCCcCceee
Q psy10359 206 SDVVKKIESSETDGRDRPVQGVTIVDCGYTPVEEPFSV 243 (249)
Q Consensus 206 ~~vv~~iE~~~~~~~d~P~~~v~i~~~g~l~~~~~~~v 243 (249)
.+++++|++.+++. ++|.++|+|.+||.+....++.+
T Consensus 156 ~~v~~~i~~~~~~~-~~P~~~v~I~~~g~l~~~~~~~~ 192 (370)
T 1ihg_A 156 MGVAKILENVEVKG-EKPAKLCVIAECGELKEGDDWGI 192 (370)
T ss_dssp HHHHHHHHTSCEET-TEESSCEEEEEEEEECTTCCCCC
T ss_pred HHHHHHHHcCCCCC-CccceeEEEEEEEEeccCccccc
Confidence 46889999988876 89999999999999976555544
No 73
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=67.70 E-value=1.4 Score=36.84 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=25.3
Q ss_pred hhhhccccCCCCCCCccceEEeecCccC
Q psy10359 209 VKKIESSETDGRDRPVQGVTIVDCGYTP 236 (249)
Q Consensus 209 v~~iE~~~~~~~d~P~~~v~i~~~g~l~ 236 (249)
+.+|++.+++.+++|+++|+|.+|+.+.
T Consensus 166 v~kI~~~~t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 166 LMKFNDLEVGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp HHHHTTSCBCGGGCBSSCCBEEEEEEEE
T ss_pred HHHHHcCCcCCCCCcCCCeEEEEEEEEc
Confidence 6789999998889999999999999884
No 74
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=64.36 E-value=2.8 Score=33.40 Aligned_cols=28 Identities=25% Similarity=0.551 Sum_probs=24.7
Q ss_pred hhhhhhhccccCC-CCCCCccceEEeecC
Q psy10359 206 SDVVKKIESSETD-GRDRPVQGVTIVDCG 233 (249)
Q Consensus 206 ~~vv~~iE~~~~~-~~d~P~~~v~i~~~g 233 (249)
.+++++|++.+++ .+++|.++|+|.+|.
T Consensus 146 mdvv~~I~~~~t~~~~~~P~~~v~I~~v~ 174 (176)
T 2a2n_A 146 MEVVQRISNVKVNPKTDKPYEDVSIINIT 174 (176)
T ss_dssp HHHHHHHHTSCBCTTTCCBSSCCBEEEEE
T ss_pred HHHHHHHHcCCccCCCCccCCCeEEEEEE
Confidence 5789999999998 678999999999874
No 75
>4i62_A Amino acid ABC transporter, periplasmic amino ACI protein, putative; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases (NIAI niaid; HET: ARG; 1.05A {Streptococcus pneumoniae}
Probab=39.35 E-value=4.7 Score=32.39 Aligned_cols=16 Identities=25% Similarity=0.306 Sum_probs=9.0
Q ss_pred eeeEEEEEeCCCCcch
Q psy10359 51 VGKIEIGLFGKTVPRT 66 (249)
Q Consensus 51 ~G~i~ieL~~~~aP~t 66 (249)
.+.|.|....+..|.+
T Consensus 38 ~~~l~v~~~~~~~P~~ 53 (269)
T 4i62_A 38 KGKLVVALNPDFAPFE 53 (269)
T ss_dssp HTEEEEEECSCBTTTB
T ss_pred CCeEEEEecCCCCCce
Confidence 3456666665655643
No 76
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=22.15 E-value=28 Score=26.78 Aligned_cols=15 Identities=7% Similarity=0.189 Sum_probs=12.0
Q ss_pred ECceeeeeEEEEEeC
Q psy10359 46 IGEVNVGKIEIGLFG 60 (249)
Q Consensus 46 i~~t~~G~i~ieL~~ 60 (249)
..|++...|.|+|+.
T Consensus 40 ~~G~PA~gv~V~L~~ 54 (147)
T 4ank_A 40 VRGSPAINVAVHVFR 54 (147)
T ss_dssp TTTEECCSCEEEEEE
T ss_pred CCCcCCCCCEEEEEE
Confidence 356888899999985
No 77
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=22.09 E-value=21 Score=26.57 Aligned_cols=8 Identities=25% Similarity=0.235 Sum_probs=0.0
Q ss_pred hhHHHHHH
Q psy10359 5 VNKKTCAF 12 (249)
Q Consensus 5 ~~~~~~~~ 12 (249)
|+|+++++
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 34544443
No 78
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=22.00 E-value=51 Score=17.40 Aligned_cols=14 Identities=29% Similarity=0.297 Sum_probs=10.0
Q ss_pred CCCCceEEEEcCCC
Q psy10359 140 DTNGSQFFITTKKT 153 (249)
Q Consensus 140 ~~~~SqFfItl~~~ 153 (249)
..-.|..||||.+-
T Consensus 7 KR~aSSvFITLapp 20 (26)
T 2k9u_B 7 KRVASSVFITLAPP 20 (26)
T ss_dssp SSCEEEEEEEECCS
T ss_pred hheeeeEEEEecCc
Confidence 34567789999863
No 79
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=20.36 E-value=39 Score=25.00 Aligned_cols=18 Identities=11% Similarity=0.047 Sum_probs=0.0
Q ss_pred ChhhhhHHHHHHHHHHHH
Q psy10359 1 MKPFVNKKTCAFAAIVLT 18 (249)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (249)
||+..+.++++.++++++
T Consensus 1 ~~~~~~~~~~l~~~~~~~ 18 (132)
T 3c75_A 1 MISAKTLRPAIAAIALFA 18 (132)
T ss_dssp ------------------
T ss_pred CcchhhHHHHHHHHHHHH
Confidence 666666444444444443
Done!