Query psy1036
Match_columns 399
No_of_seqs 543 out of 2576
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 15:55:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 1.7E-30 5.8E-35 242.2 17.7 221 81-396 4-275 (282)
2 4g8k_A 2-5A-dependent ribonucl 100.0 3.2E-30 1.1E-34 247.8 20.1 269 83-389 22-311 (337)
3 3b7b_A Euchromatic histone-lys 100.0 1.2E-29 4E-34 231.0 21.6 219 78-390 3-221 (237)
4 1n11_A Ankyrin; clathrin, BAND 100.0 3.3E-30 1.1E-34 256.2 19.2 291 81-390 9-322 (437)
5 1yyh_A HN1;, notch 1, ankyrin 100.0 3.2E-30 1.1E-34 238.0 16.7 217 81-390 5-234 (253)
6 4gpm_A Engineered protein OR26 100.0 1.3E-29 4.5E-34 220.2 18.3 120 88-244 6-125 (169)
7 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-29 4.2E-34 252.1 20.4 293 81-390 42-355 (437)
8 4b93_B Ankyrin repeat domain-c 100.0 7.1E-30 2.4E-34 238.5 17.4 219 83-388 8-227 (269)
9 2xai_A ASB-9, ankyrin repeat a 100.0 1.7E-29 5.7E-34 234.4 19.1 207 85-388 2-208 (261)
10 1wdy_A 2-5A-dependent ribonucl 100.0 4.6E-29 1.6E-33 232.1 21.0 251 84-390 3-264 (285)
11 3ljn_A Hypothetical protein; a 100.0 4.7E-30 1.6E-34 249.2 14.0 157 80-247 14-198 (364)
12 1k1a_A B-cell lymphoma 3-encod 100.0 3.3E-29 1.1E-33 228.2 18.1 218 81-389 4-226 (241)
13 3d9h_A CDNA FLJ77766, highly s 100.0 4.3E-29 1.5E-33 234.9 19.4 214 78-388 51-264 (285)
14 3utm_A Tankyrase-1; tankyrase, 100.0 7E-29 2.4E-33 238.1 18.9 262 83-389 21-290 (351)
15 3aji_A 26S proteasome non-ATPa 100.0 1.4E-28 4.8E-33 223.0 19.6 209 86-388 6-214 (231)
16 2dzn_A Probable 26S proteasome 100.0 1.1E-28 3.7E-33 223.1 18.1 213 86-388 2-217 (228)
17 2f8y_A Notch homolog 1, transl 100.0 5E-28 1.7E-32 218.1 19.8 130 80-245 19-148 (223)
18 1s70_B 130 kDa myosin-binding 100.0 1.5E-28 5E-33 231.6 14.8 237 83-389 37-275 (299)
19 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-27 4.7E-32 229.0 21.2 249 78-388 50-322 (351)
20 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-28 4.2E-33 240.6 13.5 224 84-390 123-357 (373)
21 3kea_A K1L; tropism, ANK repea 100.0 2.8E-28 9.6E-33 229.4 13.6 128 80-246 25-153 (285)
22 3eu9_A Huntingtin-interacting 100.0 2.6E-27 8.9E-32 214.8 19.3 217 82-391 5-222 (240)
23 1wdy_A 2-5A-dependent ribonucl 100.0 4.6E-27 1.6E-31 218.6 20.3 226 83-376 36-283 (285)
24 2rfa_A Transient receptor pote 100.0 1.3E-27 4.5E-32 216.9 15.9 214 85-379 2-230 (232)
25 4gpm_A Engineered protein OR26 99.9 2.2E-27 7.6E-32 206.1 16.1 129 81-246 32-160 (169)
26 3hra_A Ankyrin repeat family p 99.9 4.2E-27 1.4E-31 208.6 17.8 126 84-245 3-129 (201)
27 3d9h_A CDNA FLJ77766, highly s 99.9 1.6E-27 5.5E-32 224.1 15.2 217 83-390 12-233 (285)
28 1ikn_D Protein (I-kappa-B-alph 99.9 7.3E-28 2.5E-32 219.4 10.5 128 82-246 4-141 (236)
29 2etb_A Transient receptor pote 99.9 8.1E-28 2.8E-32 221.8 10.7 197 86-391 2-233 (256)
30 1ihb_A P18-INK4C(INK6), cyclin 99.9 9.5E-27 3.2E-31 199.3 16.3 122 86-245 5-126 (162)
31 1yyh_A HN1;, notch 1, ankyrin 99.9 1.1E-26 3.9E-31 214.1 17.3 145 70-250 41-185 (253)
32 3v30_A DNA-binding protein rfx 99.9 6.1E-27 2.1E-31 202.8 14.4 170 86-382 2-171 (172)
33 2xai_A ASB-9, ankyrin repeat a 99.9 1E-26 3.5E-31 215.5 15.2 212 80-390 30-249 (261)
34 4g8k_A 2-5A-dependent ribonucl 99.9 7.7E-26 2.6E-30 217.1 21.3 159 83-244 56-261 (337)
35 3aji_A 26S proteasome non-ATPa 99.9 1.7E-26 5.7E-31 209.2 14.8 132 80-248 34-165 (231)
36 3ljn_A Hypothetical protein; a 99.9 1.1E-26 3.7E-31 225.5 13.0 153 80-245 47-234 (364)
37 2pnn_A Transient receptor pote 99.9 9E-27 3.1E-31 217.0 10.9 202 80-390 7-244 (273)
38 1sw6_A Regulatory protein SWI6 99.9 9.8E-27 3.4E-31 223.2 10.8 220 89-389 100-326 (327)
39 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-25 4.2E-30 187.4 15.3 126 82-244 10-135 (136)
40 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.8E-25 6.3E-30 193.2 16.3 151 82-243 10-167 (169)
41 3jxi_A Vanilloid receptor-rela 99.9 3.4E-26 1.2E-30 211.2 11.7 139 84-243 3-161 (260)
42 1d9s_A Cyclin-dependent kinase 99.9 5.5E-26 1.9E-30 189.5 11.4 129 79-245 5-134 (136)
43 1k1a_A B-cell lymphoma 3-encod 99.9 9.7E-26 3.3E-30 205.2 14.0 140 77-249 37-177 (241)
44 1s70_B 130 kDa myosin-binding 99.9 1.5E-25 5.3E-30 210.8 14.8 235 92-390 4-243 (299)
45 1oy3_D Transcription factor in 99.9 1.5E-25 5.2E-30 208.6 14.5 157 80-247 39-217 (282)
46 2rfm_A Putative ankyrin repeat 99.9 2.5E-25 8.7E-30 196.2 14.5 152 81-243 30-188 (192)
47 2fo1_E LIN-12 protein; beta-ba 99.9 5E-25 1.7E-29 215.0 17.3 134 75-245 155-302 (373)
48 2etb_A Transient receptor pote 99.9 7.6E-26 2.6E-30 208.6 10.4 128 82-244 39-203 (256)
49 2dzn_A Probable 26S proteasome 99.9 1.2E-24 4E-29 196.5 17.8 165 80-253 30-206 (228)
50 1ikn_D Protein (I-kappa-B-alph 99.9 4.2E-25 1.4E-29 201.1 14.4 160 78-247 37-209 (236)
51 1awc_B Protein (GA binding pro 99.9 1.4E-24 4.9E-29 184.4 16.2 125 86-248 2-126 (153)
52 3v31_A Ankyrin repeat family A 99.9 9.9E-25 3.4E-29 187.9 15.4 124 86-246 3-126 (167)
53 3eu9_A Huntingtin-interacting 99.9 2.6E-24 8.8E-29 195.0 18.4 201 79-372 35-236 (240)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.3E-26 1.1E-30 209.5 5.8 126 82-245 1-126 (239)
55 3hra_A Ankyrin repeat family p 99.9 1.6E-24 5.5E-29 191.9 16.6 156 78-244 31-200 (201)
56 3b7b_A Euchromatic histone-lys 99.9 3.6E-24 1.2E-28 194.6 18.9 167 80-257 38-212 (237)
57 3v30_A DNA-binding protein rfx 99.9 5.7E-25 2E-29 190.3 13.0 130 80-246 30-159 (172)
58 2pnn_A Transient receptor pote 99.9 2.3E-25 7.9E-30 207.4 11.0 140 83-244 51-215 (273)
59 3twr_A Tankyrase-2; ankyrin re 99.9 4.3E-24 1.5E-28 183.5 18.1 136 83-254 5-140 (165)
60 2rfa_A Transient receptor pote 99.9 9.2E-25 3.1E-29 198.0 14.1 146 78-246 29-182 (232)
61 4b93_B Ankyrin repeat domain-c 99.9 1E-24 3.5E-29 203.5 14.5 140 79-255 79-218 (269)
62 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.3E-24 7.8E-29 175.8 14.3 124 85-245 1-124 (126)
63 1awc_B Protein (GA binding pro 99.9 2.3E-24 7.9E-29 183.1 14.8 122 83-241 31-152 (153)
64 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-24 5E-29 186.4 12.7 130 78-245 34-163 (165)
65 1bi7_B P16INK4A, MTS1, multipl 99.9 5.2E-25 1.8E-29 187.9 9.7 128 83-248 9-137 (156)
66 3f6q_A Integrin-linked protein 99.9 6.7E-24 2.3E-28 185.0 16.9 137 84-257 3-140 (179)
67 3v31_A Ankyrin repeat family A 99.9 3.8E-24 1.3E-28 184.2 14.6 130 79-245 29-158 (167)
68 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.7E-24 9.4E-29 183.9 13.5 129 80-246 32-161 (162)
69 2rfm_A Putative ankyrin repeat 99.9 5.2E-24 1.8E-28 187.7 14.7 123 79-211 61-190 (192)
70 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.4E-24 2.2E-28 180.6 14.4 145 87-244 3-155 (156)
71 4hbd_A KN motif and ankyrin re 99.9 2.5E-24 8.6E-29 201.4 12.2 155 80-245 105-273 (276)
72 2f8y_A Notch homolog 1, transl 99.9 2.9E-23 9.9E-28 186.8 17.9 157 78-245 50-214 (223)
73 3kea_A K1L; tropism, ANK repea 99.9 1.2E-24 4E-29 204.6 9.0 124 85-247 61-186 (285)
74 4hbd_A KN motif and ankyrin re 99.9 2E-24 7E-29 202.0 10.6 121 88-243 78-204 (276)
75 3aaa_C Myotrophin, protein V-1 99.9 3.3E-24 1.1E-28 175.4 10.5 112 83-231 4-115 (123)
76 3f6q_A Integrin-linked protein 99.9 4.3E-24 1.5E-28 186.2 11.9 135 76-247 29-163 (179)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.3E-23 7.8E-28 177.1 15.4 114 128-244 2-123 (156)
78 3c5r_A BARD-1, BRCA1-associate 99.9 9E-25 3.1E-29 182.1 6.5 125 82-243 6-130 (137)
79 3jxi_A Vanilloid receptor-rela 99.9 5.5E-24 1.9E-28 196.4 12.3 132 78-245 85-248 (260)
80 2vge_A RELA-associated inhibit 99.9 1.7E-23 5.8E-28 190.5 12.0 130 80-246 15-147 (229)
81 3t8k_A Uncharacterized protein 99.9 7.7E-24 2.6E-28 186.7 8.4 125 84-245 36-177 (186)
82 3deo_A Signal recognition part 99.9 4.5E-23 1.5E-27 180.7 12.8 115 83-235 41-156 (183)
83 3ehr_A Osteoclast-stimulating 99.9 1.2E-23 4E-28 189.9 8.3 127 84-247 71-198 (222)
84 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.4E-23 1.8E-27 188.1 12.3 127 83-246 34-163 (239)
85 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.9E-22 6.6E-27 174.1 14.0 146 126-390 12-157 (169)
86 3ui2_A Signal recognition part 99.9 1E-22 3.5E-27 187.0 12.5 111 83-231 42-153 (244)
87 1d9s_A Cyclin-dependent kinase 99.9 2E-22 6.9E-27 167.7 10.4 97 118-244 3-100 (136)
88 2b0o_E UPLC1; arfgap, structur 99.9 6.4E-22 2.2E-26 187.6 14.5 131 79-245 144-282 (301)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 2.3E-22 7.9E-27 171.4 9.7 142 125-386 9-151 (156)
90 1sw6_A Regulatory protein SWI6 99.9 2.2E-22 7.4E-27 192.9 10.5 159 77-254 121-315 (327)
91 1dcq_A PYK2-associated protein 99.9 1.4E-21 4.9E-26 183.0 15.5 127 84-246 128-262 (278)
92 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.2E-21 7.5E-26 150.6 11.8 91 127-245 1-91 (93)
93 3lvq_E ARF-GAP with SH3 domain 99.9 2.6E-21 9E-26 195.9 15.7 133 79-247 125-265 (497)
94 3jue_A Arfgap with coiled-coil 99.9 4.3E-21 1.5E-25 186.5 14.5 125 85-245 198-324 (368)
95 2vge_A RELA-associated inhibit 99.9 2.7E-22 9.2E-27 182.6 5.6 111 112-250 3-115 (229)
96 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.5E-21 3.3E-25 154.2 14.2 90 127-244 1-90 (126)
97 3t8k_A Uncharacterized protein 99.8 4.4E-22 1.5E-26 175.4 5.9 153 86-276 6-175 (186)
98 2jab_A H10-2-G3; HER2, darpin, 99.8 6.8E-21 2.3E-25 158.4 11.8 91 126-244 12-102 (136)
99 2aja_A Ankyrin repeat family p 99.8 1.7E-22 5.6E-27 197.2 1.1 128 84-245 90-222 (376)
100 3c5r_A BARD-1, BRCA1-associate 99.8 1E-20 3.4E-25 157.4 11.5 103 124-254 6-108 (137)
101 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-20 4.2E-25 146.3 10.8 93 85-214 1-93 (93)
102 2l6b_A NR1C; ankyrin, consensu 99.8 8E-21 2.7E-25 153.1 8.4 107 83-226 6-112 (115)
103 3ehr_A Osteoclast-stimulating 99.8 2.7E-20 9.4E-25 167.7 7.5 92 125-244 70-162 (222)
104 3aaa_C Myotrophin, protein V-1 99.8 1.6E-19 5.5E-24 147.3 10.5 98 126-251 5-102 (123)
105 2l6b_A NR1C; ankyrin, consensu 99.8 2.1E-19 7.1E-24 144.7 10.4 100 124-251 5-104 (115)
106 2b0o_E UPLC1; arfgap, structur 99.8 1.6E-19 5.4E-24 171.1 7.2 111 82-235 186-299 (301)
107 2aja_A Ankyrin repeat family p 99.8 1.3E-19 4.5E-24 176.7 6.3 119 86-246 65-187 (376)
108 2zgd_A 3 repeat synthetic anky 99.8 6.9E-19 2.3E-23 141.0 9.3 89 125-241 21-109 (110)
109 3ui2_A Signal recognition part 99.8 6.6E-19 2.3E-23 161.5 9.9 93 127-248 44-137 (244)
110 3lvq_E ARF-GAP with SH3 domain 99.7 5.6E-18 1.9E-22 171.4 12.8 137 129-390 133-278 (497)
111 2zgd_A 3 repeat synthetic anky 99.7 1.7E-17 5.7E-22 132.8 11.1 92 80-207 18-109 (110)
112 3deo_A Signal recognition part 99.7 1.2E-17 4.1E-22 146.0 10.1 95 126-249 42-137 (183)
113 3jue_A Arfgap with coiled-coil 99.7 2.5E-17 8.7E-22 160.0 11.4 90 127-244 198-290 (368)
114 1dcq_A PYK2-associated protein 99.7 4E-17 1.4E-21 152.7 11.1 99 79-214 162-263 (278)
115 3bsu_A Ribonuclease H1, RNAse 93.3 0.044 1.5E-06 36.7 2.3 35 3-37 16-50 (53)
116 1qhk_A RNAse HI, protein (ribo 92.3 0.045 1.5E-06 35.6 1.2 33 3-35 14-46 (47)
117 3bsu_A Ribonuclease H1, RNAse 63.1 4.4 0.00015 26.8 2.3 34 263-296 16-49 (53)
118 1qhk_A RNAse HI, protein (ribo 53.2 4.3 0.00015 26.1 0.9 33 263-295 14-46 (47)
119 1gp8_A Protein (scaffolding pr 42.3 18 0.0006 21.9 2.3 20 348-367 15-34 (40)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.7e-30 Score=242.18 Aligned_cols=221 Identities=15% Similarity=0.077 Sum_probs=149.3
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCC---CcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 81 SLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDF---PTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~---~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
..+..|.||||+||..|+.++|+ +|++.|.+ ++. .+..|+||||+||..|+.+++++|+++|++
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---- 70 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQHEPFLD--------FLLGFSAGHEYLDL-QNDLGQTALHLAAILGEASTVEKLYAAGAG---- 70 (282)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHH--------HHHHHHTTSGGGGC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----
T ss_pred ccCCCCCcHHHHHHHcCCHHHHH--------HHHhcCCCcccccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----
Confidence 45678999999999999999999 77777766 444 567899999999999999999999999987
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC-----------------------
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQ----------------------- 214 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~----------------------- 214 (399)
++.+|. .|+||||+|+..|+.+++++|++++ ++
T Consensus 71 ----------------------~~~~~~-~g~tpL~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (282)
T 1oy3_D 71 ----------------------VLVAER-GGHTALHLACRVRAHTCACVLLQPR-PSHPRDASDTYLTQSQDCTPDTSHA 126 (282)
T ss_dssp ----------------------SSCCCT-TSCCHHHHHTTTTCHHHHHHHSSSC-CSSCCCC------------------
T ss_pred ----------------------CCCCCC-CCCCHHHHHHHcCCcchhHhhhccC-CCCchhhHHHHhhcccccCcchhcc
Confidence 677887 6888888888888888888888877 33
Q ss_pred ------------------------cccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhcccC-CCCccchhhhhchHH
Q psy1036 215 ------------------------TSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVATKS-EGTEEGERVFDNKEE 269 (399)
Q Consensus 215 ------------------------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 269 (399)
++.+|..|+||||+|+..|+.+++++|++.+......... +.+....++.....+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp -----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred hhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 6677888888888888888888888888876443322211 111111111111111
Q ss_pred HHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHH
Q psy1036 270 ALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVK 349 (399)
Q Consensus 270 ~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~ 349 (399)
.++.+- ..| ......+..+.||
T Consensus 207 ~v~~Ll--------------------~~g--------------------------------------ad~~~~d~~g~tp 228 (282)
T 1oy3_D 207 VLELLL--------------------KAG--------------------------------------ADPTARMYGGRTP 228 (282)
T ss_dssp HHHHHH--------------------HTT--------------------------------------CCTTCCCTTSCCH
T ss_pred HHHHHH--------------------HcC--------------------------------------CCCcccccCCCCH
Confidence 111111 011 1112233456799
Q ss_pred HHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhccccCcccc
Q psy1036 350 LRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSRCSGASED 396 (399)
Q Consensus 350 l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~~~~~~~ 396 (399)
||+|++.|+.++|+.|+..|+++++.+.+|.|+|+.|..-...-++|
T Consensus 229 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~~~~~ 275 (282)
T 1oy3_D 229 LGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRD 275 (282)
T ss_dssp HHHHHTSSCHHHHHHHHHTTCCCCCCC--------------------
T ss_pred HHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccccccc
Confidence 99999999999999999999999999999999999998876655543
No 2
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=3.2e-30 Score=247.77 Aligned_cols=269 Identities=13% Similarity=0.066 Sum_probs=180.7
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc---
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL--- 159 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l--- 159 (399)
..+|.|+||.||+.|++++|+ +|+++|++++...+..|+||||+||..|+.++|++||++|++++....
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~--------~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~ 93 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQ--------QLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA 93 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--------HHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCChHHHHHHHcCCHHHHH--------HHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCC
Confidence 456889999999999999999 888999999885555699999999999999999999999998654332
Q ss_pred ---cccCCChhH-HHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccC----------CCCCCcH
Q psy1036 160 ---LYDSDTPSY-IERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVR----------NKEGKTP 225 (399)
Q Consensus 160 ---~~a~~~~~~-~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~----------d~~G~Tp 225 (399)
+.+...... ....+...+.++|..|. .|+||||+|+..|+.+++++|+++| ++++.+ +..|+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~t~l~~A~~~~~~~~~~~ll~~g-a~~~~~~~~~~~~~~~~~~g~T~ 171 (337)
T 4g8k_A 94 TPFILAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRRKTKEDQERLRKGGATA 171 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCCC-----CTTCSCCH
T ss_pred chhHHHHhcccchhhHHhhhccchhhhhcc-CCCCHHHHHHHcCcHHHHHHHHHcC-CCcchhhccccccccccCCCCcH
Confidence 222211111 12555667788999998 6999999999999999999999999 787654 4568999
Q ss_pred HHHHHhCCCHHHHHHHHhc-cCchhhcccCCCCccchhhh-hchHHHHHHHHHh--hccccccccChHHHHHHHhcCCcc
Q psy1036 226 LDVCFKMPSVDSMGPLSTK-LTPTKVATKSEGTEEGERVF-DNKEEALLFIKKN--KKIRFKSFRNFQDAQNFAYHGSCG 301 (399)
Q Consensus 226 L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~--k~~r~~~~~~~~~a~~~a~~~~~~ 301 (399)
||+|+.+|+.+++++|+++ ..........+......... ........+++.+ .++.+..-.
T Consensus 172 L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d--------------- 236 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG--------------- 236 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCC---------------
T ss_pred HHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcC---------------
Confidence 9999999999999999965 33322222221111111111 1111111122211 222211100
Q ss_pred CCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchh
Q psy1036 302 VNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPT 381 (399)
Q Consensus 302 ~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~ 381 (399)
.-..||+. ..+..+ ...+........+......+..+.||||+|++.|+.++|+.|+..||+++.. +
T Consensus 237 ---~~g~t~L~----~a~~~~-~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~ 303 (337)
T 4g8k_A 237 ---ERGKTPLI----LAVEKK-HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----D 303 (337)
T ss_dssp ---GGGCCHHH----HHHHTT-CHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----C
T ss_pred ---CCCCCHHH----HHHHhh-hhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----C
Confidence 00011111 111111 1122222233334456677788889999999999999999999999998754 5
Q ss_pred HHHHhhcc
Q psy1036 382 ILHVVCSR 389 (399)
Q Consensus 382 ~l~~~~~~ 389 (399)
+||.|++.
T Consensus 304 ~L~~A~~~ 311 (337)
T 4g8k_A 304 LVMTARRN 311 (337)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 89999874
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.2e-29 Score=231.00 Aligned_cols=219 Identities=16% Similarity=0.103 Sum_probs=173.5
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
+++..+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---- 69 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICH--------MLVQAGANIDT-CSEDQRTPLMEAAENNHLEAVKYLIKAGAL---- 69 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHH--------HHHHcCCCcCc-cCCCCCCHHHHHHHhCCHHHHHHHHhCCCC----
Confidence 45666788999999999999999999 88899988877 466899999999999999999999999987
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHH
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDS 237 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~i 237 (399)
++..|. .|.||||+|+..|+.+++++|++.|..+++..|..|+||||+|+..|+.++
T Consensus 70 ----------------------~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 126 (237)
T 3b7b_A 70 ----------------------VDPKDA-EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDL 126 (237)
T ss_dssp ----------------------CCCCCT-TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ----------------------CCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHH
Confidence 788888 699999999999999999999999878899999999999999999999999
Q ss_pred HHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccc
Q psy1036 238 MGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVT 317 (399)
Q Consensus 238 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~ 317 (399)
+++|++.+.........+. ..++.. ...+..++++.+ ...|
T Consensus 127 ~~~Ll~~g~~~~~~~~~g~--t~L~~A-~~~~~~~~~~~L-----------------l~~g------------------- 167 (237)
T 3b7b_A 127 VKLLLSKGSDINIRDNEEN--ICLHWA-AFSGCVDIAEIL-----------------LAAK------------------- 167 (237)
T ss_dssp HHHHHHTTCCTTCCCTTSC--CHHHHH-HHHCCHHHHHHH-----------------HTTT-------------------
T ss_pred HHHHHHCCCCCCccCCCCC--CHHHHH-HHCCCHHHHHHH-----------------HHcC-------------------
Confidence 9999998754333322222 222211 111111121111 1011
Q ss_pred cCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhccc
Q psy1036 318 AADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 318 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
......+..+.||||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|++..
T Consensus 168 -------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 168 -------------------CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp -------------------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred -------------------CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 111223345678999999999999999999999999999999999999998643
No 4
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.3e-30 Score=256.25 Aligned_cols=291 Identities=20% Similarity=0.139 Sum_probs=180.1
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC------
Q psy1036 81 SLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP------ 154 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~------ 154 (399)
..+..|+||||+||..|++++|+ +|++.|++++. .+..|+||||+||..|+.+++++|++.|++.
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~--------~Ll~~g~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 79 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVK--------NLLQRGASPNV-SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKD 79 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHH--------HHHHTTCCSCC-SSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT
T ss_pred ccCCCCCCHHHHHHHCCCHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC
Confidence 34667888999999999999999 77788877776 4667888888888888888888888888763
Q ss_pred CCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCC
Q psy1036 155 AFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMP 233 (399)
Q Consensus 155 ~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g 233 (399)
+.+++++++..+.... .+++..++++|..|. .|+||||+|+..|+.++|++|++.+ ++.+..+..|+||||+|+..|
T Consensus 80 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~g 157 (437)
T 1n11_A 80 DQTPLHCAARIGHTNMVKLLLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKE-ASQACMTKKGFTPLHVAAKYG 157 (437)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCC-CCCcCCCCCCCCHHHHHHHcC
Confidence 3456666654443322 555666777888887 5888888888888888888888888 788888888888888888888
Q ss_pred CHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhcccccc-----ccChH--------HH-HHHHhcCC
Q psy1036 234 SVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKS-----FRNFQ--------DA-QNFAYHGS 299 (399)
Q Consensus 234 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~-----~~~~~--------~a-~~~a~~~~ 299 (399)
+.+++++|+++..........+.+.....+.....+.++.+... ++.... ..... +. ..+...|.
T Consensus 158 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 236 (437)
T 1n11_A 158 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236 (437)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 88888888887654333333322222223333333333333221 111100 11111 11 11111111
Q ss_pred ccCCCC--CCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCC
Q psy1036 300 CGVNTS--LLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSG 377 (399)
Q Consensus 300 ~~~~~s--~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~ 377 (399)
+.+.. ...+|+ +.++..+ ..++... ..+.+......+..+.|+||.|++.|+.++|+.|+..+++++....
T Consensus 237 -~~~~~~~~g~t~L----~~A~~~g-~~~~v~~-Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 309 (437)
T 1n11_A 237 -SANAESVQGVTPL----HLAAQEG-HAEMVAL-LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 309 (437)
T ss_dssp -CTTCCCTTCCCHH----HHHHHTT-CHHHHHH-HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS
T ss_pred -CCCCCCCCCCCHH----HHHHHCC-CHHHHHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC
Confidence 11100 001111 1111111 2222222 2233344445566777999999999999999999999999998888
Q ss_pred CchhHHHHhhccc
Q psy1036 378 DFPTILHVVCSRC 390 (399)
Q Consensus 378 d~~~~l~~~~~~~ 390 (399)
+|.|+||.|++..
T Consensus 310 ~g~t~L~~A~~~g 322 (437)
T 1n11_A 310 MGYTPLHVASHYG 322 (437)
T ss_dssp SCCCHHHHHHHSS
T ss_pred CCCCHHHHHHHcC
Confidence 8999999988753
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=3.2e-30 Score=237.96 Aligned_cols=217 Identities=14% Similarity=0.083 Sum_probs=142.9
Q ss_pred CCCccchHHHHHHHHcC-------------CHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy1036 81 SLKSQELVKLRKLIEKG-------------NLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEML 147 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G-------------~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~L 147 (399)
..+..|+||||+|+..| +.++|+ +|++.|.+++...+..|+||||+||..|+.+++++|
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~--------~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 76 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVIS--------DFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRL 76 (253)
T ss_dssp -------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHH--------HHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 45678999999999987 899999 888889887665678899999999999999999999
Q ss_pred HhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHH
Q psy1036 148 LEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLD 227 (399)
Q Consensus 148 l~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~ 227 (399)
++.|++ ++..|. .|+||||+|+..|+.+++++|++.+..+++.+|..|+||||
T Consensus 77 l~~g~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 129 (253)
T 1yyh_A 77 LEASAD--------------------------ANIQDN-MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129 (253)
T ss_dssp HHTTCC--------------------------TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHH
T ss_pred HHcCCC--------------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHH
Confidence 999987 788888 69999999999999999999999995599999999999999
Q ss_pred HHHhCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCC
Q psy1036 228 VCFKMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLL 307 (399)
Q Consensus 228 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~ 307 (399)
+|+..|+.+++++|++...........+. ..++.. ...+..++++.+ ...|
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~--t~L~~A-~~~~~~~~v~~L-----------------l~~g--------- 180 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHADVNAVDDLGK--SALHWA-AAVNNVDAAVVL-----------------LKNG--------- 180 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCCTTCBCTTSC--BHHHHH-HHHTCHHHHHHH-----------------HHTT---------
T ss_pred HHHHcChHHHHHHHHHcCCCCCCcCCCCC--CHHHHH-HHcCCHHHHHHH-----------------HHcC---------
Confidence 99999999999999998754433332222 222221 111122222211 1111
Q ss_pred CCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhh
Q psy1036 308 EAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVC 387 (399)
Q Consensus 308 ~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~ 387 (399)
......+..+.||||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|+
T Consensus 181 -----------------------------a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 181 -----------------------------ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ 231 (253)
T ss_dssp -----------------------------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred -----------------------------CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHH
Confidence 111223345679999999999999999999999999999999999999998
Q ss_pred ccc
Q psy1036 388 SRC 390 (399)
Q Consensus 388 ~~~ 390 (399)
+.-
T Consensus 232 ~~g 234 (253)
T 1yyh_A 232 ERM 234 (253)
T ss_dssp HTT
T ss_pred HcC
Confidence 754
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.3e-29 Score=220.24 Aligned_cols=120 Identities=26% Similarity=0.338 Sum_probs=114.0
Q ss_pred HHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChh
Q psy1036 88 VKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPS 167 (399)
Q Consensus 88 T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~ 167 (399)
++|+.||+.|++++|+ +|++.|++++. ++..|+||||+|+..|+.+++++|++.|++
T Consensus 6 ~~L~~Aa~~G~~~~v~--------~Ll~~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-------------- 62 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVK--------DLIENGADVNA-SDSDGRTPLHHAAENGHKEVVKLLISKGAD-------------- 62 (169)
T ss_dssp HHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--------------
T ss_pred HHHHHHHHcCCHHHHH--------HHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccc--------------
Confidence 4799999999999999 88899999998 577899999999999999999999999987
Q ss_pred HHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 168 YIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 168 ~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
++.+|. .|+||||+|+..|+.++|++|+++| ++++.+|.+|+||||+|+..|+.+++++|++.
T Consensus 63 ------------~~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 125 (169)
T 4gpm_A 63 ------------VNAKDS-DGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 125 (169)
T ss_dssp ------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ------------hhhhcc-CCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 889998 6999999999999999999999999 99999999999999999999999999999875
No 7
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.2e-29 Score=252.12 Aligned_cols=293 Identities=16% Similarity=0.101 Sum_probs=194.9
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC------
Q psy1036 81 SLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP------ 154 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~------ 154 (399)
..+..+.||||+||..|+.++|+ +|++.|++++. .+..|+||||+||..|+.+++++|+++|+++
T Consensus 42 ~~~~~~~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 112 (437)
T 1n11_A 42 VSNVKVETPLHMAARAGHTEVAK--------YLLQNKAKVNA-KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTA 112 (437)
T ss_dssp CSSSCCCCHHHHHHHHTCHHHHH--------HHHHHTCCSSC-CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHH--------HHHhCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCC
Confidence 34567789999999999999999 88888888777 4668999999999999999999999998874
Q ss_pred CCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCC
Q psy1036 155 AFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMP 233 (399)
Q Consensus 155 ~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g 233 (399)
+.+++++++..+.... ..++..+.+++..+. .|+||||+|+..|+.+++++|+++| ++++..+..|+||||+|+..|
T Consensus 113 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 190 (437)
T 1n11_A 113 GHTPLHIAAREGHVETVLALLEKEASQACMTK-KGFTPLHVAAKYGKVRVAELLLERD-AHPNAAGKNGLTPLHVAVHHN 190 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSCCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCC-CCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcC
Confidence 3456666654443322 455556777788887 6999999999999999999999999 899999999999999999999
Q ss_pred CHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhcc-c---cccccCh--------HHHHHHHhcCCcc
Q psy1036 234 SVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKI-R---FKSFRNF--------QDAQNFAYHGSCG 301 (399)
Q Consensus 234 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~-r---~~~~~~~--------~~a~~~a~~~~~~ 301 (399)
+.+++++|+++..........+.+...........+.++.+...... . ....+.. .+..++......+
T Consensus 191 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 270 (437)
T 1n11_A 191 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 270 (437)
T ss_dssp CHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC
Confidence 99999999987754332222222222223333333444444332111 0 0011111 1222222111111
Q ss_pred CCC--CCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCc
Q psy1036 302 VNT--SLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDF 379 (399)
Q Consensus 302 ~~~--s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~ 379 (399)
.+. .-..+|+ +.++..+ ...+... ..+.+......+..+.|+||.|++.|+.++|+.|+..+++++..+.+|
T Consensus 271 ~~~~~~~g~t~L----~~A~~~~-~~~~~~~-Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g 344 (437)
T 1n11_A 271 GNLGNKSGLTPL----HLVAQEG-HVPVADV-LIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLG 344 (437)
T ss_dssp TTCCCTTCCCHH----HHHHHHT-CHHHHHH-HHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCCCCCCHH----HHHHHcC-CHHHHHH-HHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCC
Confidence 110 0001111 1111111 1222222 223344455566778899999999999999999999999999999999
Q ss_pred hhHHHHhhccc
Q psy1036 380 PTILHVVCSRC 390 (399)
Q Consensus 380 ~~~l~~~~~~~ 390 (399)
.|+||.|++..
T Consensus 345 ~t~L~~A~~~g 355 (437)
T 1n11_A 345 YSPLHQAAQQG 355 (437)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHCC
Confidence 99999999754
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=7.1e-30 Score=238.55 Aligned_cols=219 Identities=16% Similarity=0.108 Sum_probs=129.6
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCH-HHHHHHHhccCCCCCccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNP-AMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~-~iv~~Ll~~ga~~~~~~l~~ 161 (399)
+..+.++|+.||..|++++|+.||+.............+. .+..|.||||+|+..++. .++++|++.|++
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~-~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-------- 78 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSA-ADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-------- 78 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------CCCC--------
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccc-cCccCCCHHHHHHHhCCHHHHHHHHHHCCCC--------
Confidence 5567899999999999999994443322111111111222 355678889988887765 477888888887
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|.+|. .|+||||+||..|+.++|++|++.| ++++.++..|.||+++|+..++.+++++|
T Consensus 79 ------------------vn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~~-a~~~~~~~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 79 ------------------VNVTSQ-DGSSPLHVAALHGRADLIPLLLKHG-ANAGARNADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp ------------------TTCCCT-TSCCHHHHHHHTTCTTHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred ------------------CCCcCC-CCCCHHHHHHHcCcHHHHHHHHhcC-CCcCccCCCCCCccccccccChHHHHHHH
Confidence 788887 5888888888888888888888888 78888888888888888888888888888
Q ss_pred HhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCC
Q psy1036 242 STKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADP 321 (399)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~ 321 (399)
++...........+.+....++.....+..+ .+
T Consensus 139 l~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~--------------------~L--------------------------- 171 (269)
T 4b93_B 139 LDSNAKPNKKDLSGNTPLIYACSGGHHELVA--------------------LL--------------------------- 171 (269)
T ss_dssp HHTTCCSCCCCTTCCCHHHHHHHTTCGGGHH--------------------HH---------------------------
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH--------------------HH---------------------------
Confidence 8876433222222111111111111001000 01
Q ss_pred CCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhc
Q psy1036 322 SALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCS 388 (399)
Q Consensus 322 ~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~ 388 (399)
.+.+.........+.||||+|++.|+.++|+.|+..|+++++.+.+|.|+||.|++
T Consensus 172 -----------l~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 172 -----------LQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp -----------HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred -----------HHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 11111222334566799999999999999999999999999999999999999975
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=234.38 Aligned_cols=207 Identities=14% Similarity=0.082 Sum_probs=161.5
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCC
Q psy1036 85 QELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSD 164 (399)
Q Consensus 85 ~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~ 164 (399)
.|+||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------- 61 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLR--------NLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILLKHGAQ----------- 61 (261)
T ss_dssp --CCHHHHHHHHTCHHHHH--------HHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHH--------HHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----------
Confidence 4789999999999999999 88899988887 477899999999999999999999999987
Q ss_pred ChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 165 TPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 165 ~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
+|..|. .|+||||+|+..|+.+++++|+++| ++++. +..|+||||+|+..|+.+++++|++.
T Consensus 62 ---------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (261)
T 2xai_A 62 ---------------VNGVTA-DWHTPLFNACVSGSWDCVNLLLQHG-ASVQP-ESDLASPIHEAARRGHVECVNSLIAY 123 (261)
T ss_dssp ---------------TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ---------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 788888 6999999999999999999999999 88875 45699999999999999999999998
Q ss_pred cCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCC
Q psy1036 245 LTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSAL 324 (399)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~ 324 (399)
..........+.+.....+.....+.++.+- ..|.
T Consensus 124 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll--------------------~~g~------------------------- 158 (261)
T 2xai_A 124 GGNIDHKISHLGTPLYLACENQQRACVKKLL--------------------ESGA------------------------- 158 (261)
T ss_dssp TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH--------------------HHTC-------------------------
T ss_pred CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH--------------------HcCC-------------------------
Confidence 7543333222222111111111112211111 1111
Q ss_pred cccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhc
Q psy1036 325 PQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCS 388 (399)
Q Consensus 325 ~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~ 388 (399)
.... +..+.||||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|++
T Consensus 159 -------------~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 159 -------------DVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP 208 (261)
T ss_dssp -------------CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred -------------CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc
Confidence 0001 2345689999999999999999999999999999999999999984
No 10
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.6e-29 Score=232.14 Aligned_cols=251 Identities=16% Similarity=0.135 Sum_probs=160.5
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccC
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDS 163 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~ 163 (399)
.+|.|+||.|+..|++++|+ +|++.|.+++...+..|+||||+|+..|+.+++++|++.|++
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~--------~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------- 64 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQ--------QLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD---------- 64 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHH--------HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred cccchHHHHHHHcCCHHHHH--------HHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----------
Confidence 46889999999999999999 888889888876577899999999999999999999999987
Q ss_pred CChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHh
Q psy1036 164 DTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLST 243 (399)
Q Consensus 164 ~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 243 (399)
++..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 65 ----------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 126 (285)
T 1wdy_A 65 ----------------PVLRKK-NGATPFLLAAIAGSVKLLKLFLSKG-ADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126 (285)
T ss_dssp ----------------TTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH
T ss_pred ----------------CcccCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCcccCCHHHHHHHhCCHHHHHHHHH
Confidence 566666 5777777777777777777777777 6777777777777777777777777777776
Q ss_pred ccCchhhc----------ccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCC
Q psy1036 244 KLTPTKVA----------TKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASP 313 (399)
Q Consensus 244 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~ 313 (399)
........ ...+.+.....+.....+.++.+-...+........ .| .+|+..
T Consensus 127 ~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~---------~g---------~t~l~~ 188 (285)
T 1wdy_A 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN---------MG---------RNALIH 188 (285)
T ss_dssp TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCT---------TS---------CCHHHH
T ss_pred hCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCC---------CC---------CCHHHH
Confidence 65332221 111111111111122222222222111111110000 00 000000
Q ss_pred CccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhh-cCCCeeecCCCchhHHHHhhccc
Q psy1036 314 STVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVW-DNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 314 s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~-~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
....+... ....+..+ ..+.+......+..+.||||.|++.|+.++|+.|+. .+++++..+.+|.|+||.|++..
T Consensus 189 a~~~~~~~-~~~~i~~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 189 ALLSSDDS-DVEAITHL-LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHCSCTT-THHHHHHH-HHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHccccc-hHHHHHHH-HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 00000000 00011111 222333444555667899999999999999999999 89999999999999999998754
No 11
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=4.7e-30 Score=249.20 Aligned_cols=157 Identities=17% Similarity=0.194 Sum_probs=127.6
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC----C
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP----A 155 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~----~ 155 (399)
...+..|+||||+||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.++|++|++.|++. +
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~--------~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g 84 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVR--------RLIETGVSPTI-QNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHG 84 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCccc-cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCC
Confidence 345788999999999999999999 88899988887 5778999999999999999999999999863 4
Q ss_pred CccccccCCChhHHH-HHHhhh----ccCCCC-----------------CCCCCCchHHHHHHHcC--CHHHHHHHHhCC
Q psy1036 156 FTNLLYDSDTPSYIE-RSDILL----DLYVNT-----------------PDKALNETPLHFAAKFG--SVECVKRLIGCA 211 (399)
Q Consensus 156 ~~~l~~a~~~~~~~~-~~~~~~----~~~vn~-----------------~d~~~G~TpLh~Aa~~g--~~~iv~~LL~~g 211 (399)
.+++++++..+.... .+++.. +.+++. .|. .|+||||+|+..| +.++|++|+++|
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 567777765443322 233322 444443 777 5999999999999 899999999998
Q ss_pred CCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCc
Q psy1036 212 KIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTP 247 (399)
Q Consensus 212 ~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~ 247 (399)
++++.+|..|+||||+|+..|+.+++++|++.+..
T Consensus 164 -a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 164 -ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp -CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred -CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 89999999999999999999999999999987644
No 12
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=3.3e-29 Score=228.22 Aligned_cols=218 Identities=22% Similarity=0.233 Sum_probs=164.1
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccc
Q psy1036 81 SLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLL 160 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~ 160 (399)
..+..|.||||+||..|+.++|+.|++ ++.+.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------- 71 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVN----LFQQGGRELDI-YNNLRQTPLHLAVITTLPSVVRLLVTAGAS------- 71 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHH----HHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHH----HHHhcCCCCCc-ccccCCCHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 346788999999999999999995552 12246777777 467899999999999999999999999987
Q ss_pred ccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCC----CcccCCCCCCcHHHHHHhCCCHH
Q psy1036 161 YDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKI----QTSVRNKEGKTPLDVCFKMPSVD 236 (399)
Q Consensus 161 ~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a----~~~~~d~~G~TpL~~A~~~g~~~ 236 (399)
++..|. .|+||||+|+..|+.+++++|++.+ + +++.+|..|+||||+|+..|+.+
T Consensus 72 -------------------~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 130 (241)
T 1k1a_A 72 -------------------PMALDR-HGQTAAHLACEHRSPTCLRALLDSA-APGTLDLEARNYDGLTALHVAVNTECQE 130 (241)
T ss_dssp -------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHS-CTTSCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred -------------------ccccCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccccCcCCCcHHHHHHHcCCHH
Confidence 678887 6999999999999999999999998 5 78888999999999999999999
Q ss_pred HHHHHHhccCchhhcc-cCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCc
Q psy1036 237 SMGPLSTKLTPTKVAT-KSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPST 315 (399)
Q Consensus 237 iv~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~ 315 (399)
++++|++......... ..+.+.....+.....+.++.+- ..|
T Consensus 131 ~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll--------------------~~g----------------- 173 (241)
T 1k1a_A 131 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL--------------------QHG----------------- 173 (241)
T ss_dssp HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH--------------------HTT-----------------
T ss_pred HHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHH--------------------HcC-----------------
Confidence 9999998874433322 12111111111111111111111 111
Q ss_pred cccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhcc
Q psy1036 316 VTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSR 389 (399)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~ 389 (399)
......+..+.|+||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|++.
T Consensus 174 ---------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 174 ---------------------ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp ---------------------CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred ---------------------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhc
Confidence 11122234567999999999999999999999999999999999999998763
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=4.3e-29 Score=234.90 Aligned_cols=214 Identities=14% Similarity=0.088 Sum_probs=167.1
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
++...+..|+||||+||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---- 117 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLR--------NLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILLKHGAQ---- 117 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHH--------HHHHTTCCSCE-ECTTCCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHH--------HHHHCCCCCCC-cCCCCCCHHHHHHHCCcHHHHHHHHHCCCC----
Confidence 34556788999999999999999999 88899988887 477899999999999999999999999987
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHH
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDS 237 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~i 237 (399)
++.+|. .|+||||+|+..|+.++|++|+++| ++++..+ .|+||||+|+..|+.++
T Consensus 118 ----------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~g~t~L~~A~~~g~~~~ 172 (285)
T 3d9h_A 118 ----------------------VNGVTA-DWHTPLFNACVSGSWDCVNLLLQHG-ASVQPES-DLASPIHEAARRGHVEC 172 (285)
T ss_dssp ----------------------SSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCSSCSC-TTSCHHHHHHHHTCHHH
T ss_pred ----------------------CCCCCC-CCCCHHHHHHHcCHHHHHHHHHHCC-CCCCCCC-CCCCHHHHHHHcCCHHH
Confidence 788888 6999999999999999999999999 8887654 59999999999999999
Q ss_pred HHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccc
Q psy1036 238 MGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVT 317 (399)
Q Consensus 238 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~ 317 (399)
+++|++...........+.+.....+.....+.++.+. ..|.
T Consensus 173 v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll--------------------~~ga------------------ 214 (285)
T 3d9h_A 173 VNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLL--------------------ESGA------------------ 214 (285)
T ss_dssp HHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH--------------------HTTC------------------
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH--------------------HCCC------------------
Confidence 99999887543333222222111111111112111111 1110
Q ss_pred cCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhc
Q psy1036 318 AADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCS 388 (399)
Q Consensus 318 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~ 388 (399)
... .+..+.|+||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|++
T Consensus 215 --------------------~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 215 --------------------DVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp --------------------CTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred --------------------CCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 000 13455699999999999999999999999999999999999999984
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=7e-29 Score=238.07 Aligned_cols=262 Identities=14% Similarity=0.061 Sum_probs=165.8
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhC-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSS-GDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~-g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~ 161 (399)
+..+.|+||.||+.|+.+.|+ .++.. +.+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~--------~ll~~~~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------- 83 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLM--------ALLTPLNVNCHA-SDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-------- 83 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHH--------HHCCTTTTTCCC-SSTTCCCHHHHHHHTTCHHHHHHHHHTTCC--------
T ss_pred ccccchhHHHHHHcCCHHHHH--------HHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------
Confidence 345678999999999999999 44443 566665 477899999999999999999999999987
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 84 ------------------~~~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 143 (351)
T 3utm_A 84 ------------------VHAKDK-GGLVPLHNACSYGHYEVTELLLKHG-ACVNAMDLWQFTPLHEAASKNRVEVCSLL 143 (351)
T ss_dssp ------------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------CCccCC-CCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 788998 6999999999999999999999999 99999999999999999999999999999
Q ss_pred HhccCchhhcccCCCCccchhhhhchHHHHHHHHHhh-ccc---cccccChHHHHHHHhcCCccCCC-CCCCCCCCCCcc
Q psy1036 242 STKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNK-KIR---FKSFRNFQDAQNFAYHGSCGVNT-SLLEAPASPSTV 316 (399)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k-~~r---~~~~~~~~~a~~~a~~~~~~~~~-s~~~~~~~~s~~ 316 (399)
++.+.........+... ++. ....+..+.+.... +.. .-..........+...+...... ....+|+ +
T Consensus 144 l~~g~~~~~~~~~g~~~--l~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L----~ 216 (351)
T 3utm_A 144 LSHGADPTLVNCHGKSA--VDM-APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL----H 216 (351)
T ss_dssp HHTTCCTTCCCTTSCCH--HHH-CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHH----H
T ss_pred HHcCCCCccccCCCCcc--hHH-HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHH----H
Confidence 99875544333322221 111 11112111111100 000 00000111111111111110000 0000110 0
Q ss_pred ccCCCC--CCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhcc
Q psy1036 317 TAADPS--ALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSR 389 (399)
Q Consensus 317 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~ 389 (399)
.....+ ....+..+ ..+.+......+..+.||||.|++.|+.++|+.|+..|++++..+.+|.|+||.|++.
T Consensus 217 ~A~~~~~~~~~~~~~~-Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 217 CAVASLHPKRKQVAEL-LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp HHHHCCSTTHHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHhCccHHHHHHH-HHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 000000 00111111 2223334444555666777777777777777777777777777777777777777654
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=1.4e-28 Score=222.97 Aligned_cols=209 Identities=17% Similarity=0.160 Sum_probs=161.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCC
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDT 165 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~ 165 (399)
+.++||.||..|+++.|+.++...+ ......+..|+||||+|+..|+.+++++|++.|++
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------ 65 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADK--------SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP------------ 65 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCG--------GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred ccchHHHHHHhCCHHHHHHHHHhch--------hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC------------
Confidence 4479999999999999995554433 22222466899999999999999999999999887
Q ss_pred hhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 166 PSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 166 ~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
++..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++..
T Consensus 66 --------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 129 (231)
T 3aji_A 66 --------------VNDKDD-AGWSPLHIAASAGXDEIVKALLVKG-AHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129 (231)
T ss_dssp --------------SCCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred --------------CCCcCC-CCCCHHHHHHHcCHHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 788888 6999999999999999999999999 899999999999999999999999999999987
Q ss_pred CchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCc
Q psy1036 246 TPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALP 325 (399)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~ 325 (399)
.........+. ..++.. ...+..++++.+ ...|
T Consensus 130 ~~~~~~~~~g~--t~L~~A-~~~~~~~~v~~L-----------------l~~g--------------------------- 162 (231)
T 3aji_A 130 ANPDAKDHYDA--TAMHRA-AAKGNLKMVHIL-----------------LFYK--------------------------- 162 (231)
T ss_dssp CCTTCCCTTSC--CHHHHH-HHHTCHHHHHHH-----------------HHTT---------------------------
T ss_pred CCCCCcCCCCC--cHHHHH-HHcCCHHHHHHH-----------------HhcC---------------------------
Confidence 54333222222 222211 111122222211 1011
Q ss_pred ccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhc
Q psy1036 326 QVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCS 388 (399)
Q Consensus 326 ~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~ 388 (399)
......+..+.||||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|.+
T Consensus 163 -----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 163 -----------ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp -----------CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred -----------CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 0112223456799999999999999999999999999999999999999964
No 16
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.1e-28 Score=223.05 Aligned_cols=213 Identities=17% Similarity=0.115 Sum_probs=154.6
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCC
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDT 165 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~ 165 (399)
|.||||+||..|+.++|+ +|++.|.+.....+..|+||||+|+..|+.+++++|++.|++.+
T Consensus 2 g~t~L~~A~~~g~~~~v~--------~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------- 63 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQ--------ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN---------- 63 (228)
T ss_dssp -CCHHHHHHHTTCHHHHH--------HHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC----------
T ss_pred CccHHHHHHHhCCHHHHH--------HHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc----------
Confidence 568999999999999999 66666655444457789999999999999999999999996522
Q ss_pred hhHHHHHHhhhccCCCC-CCCCCCchHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCCCcHHHHHHhCCCHHHHHHHHh
Q psy1036 166 PSYIERSDILLDLYVNT-PDKALNETPLHFAAKFGSVECVKRLIGCA-KIQTSVRNKEGKTPLDVCFKMPSVDSMGPLST 243 (399)
Q Consensus 166 ~~~~~~~~~~~~~~vn~-~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g-~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 243 (399)
++. .|. .|+||||+|+..|+.+++++|+++| .++++.+|..|+||||+|+..|+.+++++|++
T Consensus 64 --------------~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 128 (228)
T 2dzn_A 64 --------------LDDYPDD-SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE 128 (228)
T ss_dssp --------------GGGCCCT-TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------ccccCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHH
Confidence 344 566 5888888888888888888888886 25777788888888888888888888888888
Q ss_pred ccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCC
Q psy1036 244 KLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSA 323 (399)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~ 323 (399)
.+.........+.+.....+.....+.++.+- ..|.
T Consensus 129 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll--------------------~~g~------------------------ 164 (228)
T 2dzn_A 129 NGASVRIKDKFNQIPLHRAASVGSLKLIELLC--------------------GLGK------------------------ 164 (228)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH--------------------TTTC------------------------
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHH--------------------hcCc------------------------
Confidence 76443322222222111111111111111111 0110
Q ss_pred CcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHh-hcCCCeeecCCCchhHHHHhhc
Q psy1036 324 LPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLV-WDNPRYLVSSGDFPTILHVVCS 388 (399)
Q Consensus 324 ~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv-~~~~~~~~~s~d~~~~l~~~~~ 388 (399)
......+..+.||||.|++.|+.++|+.|+ ..|+++++.+.+|.|+||.|++
T Consensus 165 -------------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 165 -------------SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp -------------CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred -------------ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 111223455679999999999999999999 8999999999999999999975
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=5e-28 Score=218.12 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=118.4
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.++.
T Consensus 19 ~~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~------ 83 (223)
T 2f8y_A 19 NQTDRTGETALHLAARYSRSDAAK--------RLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNRAT------ 83 (223)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHBTTS------
T ss_pred cccCCCCCchHHHHHHcCCHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 334678999999999999999999 88899988887 477899999999999999999999999873
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMG 239 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~ 239 (399)
+++..+. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 84 -------------------~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 142 (223)
T 2f8y_A 84 -------------------DLDARMH-DGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAV 142 (223)
T ss_dssp -------------------CTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred -------------------CcccCCC-CCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHH
Confidence 2678888 6999999999999999999999999 899999999999999999999999999
Q ss_pred HHHhcc
Q psy1036 240 PLSTKL 245 (399)
Q Consensus 240 ~Ll~~~ 245 (399)
+|++..
T Consensus 143 ~Ll~~g 148 (223)
T 2f8y_A 143 VLLKNG 148 (223)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 999764
No 18
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=1.5e-28 Score=231.56 Aligned_cols=237 Identities=19% Similarity=0.118 Sum_probs=171.9
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+..+.|+||.||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--------- 98 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVL--------RLLERGADINY-ANVDGLTALHQACIDDNVDMVKFLVENGAN--------- 98 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHH--------HHHHHCCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred ccCCccHHHHHHHcCCHHHHH--------HHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---------
Confidence 456789999999999999999 88888988887 467899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..|.||||+|+..++.++++.++
T Consensus 99 -----------------~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 99 -----------------INQPDN-EGWIPLHAAASCGYLDIAEYLISQG-AHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp -----------------TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred -----------------CCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 788998 6999999999999999999999999 999999999999999999999999999888
Q ss_pred hccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCC--CCCCCCCCCCCccccCC
Q psy1036 243 TKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVN--TSLLEAPASPSTVTAAD 320 (399)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~--~s~~~~~~~~s~~~~~~ 320 (399)
.......... ........+..+.. +...+..... .....+|+ +.++.
T Consensus 160 ~~~~~~~~~~----------~~~~~~~~~~~~~~-----------------~l~~~~~~~~~~~~~g~t~L----~~A~~ 208 (299)
T 1s70_B 160 NRQGVDIEAA----------RKEEERIMLRDARQ-----------------WLNSGHINDVRHAKSGGTAL----HVAAA 208 (299)
T ss_dssp HHHTCCHHHH----------HHHHHHHHHHHHHH-----------------HHHHTCCCCCCCTTTCCCHH----HHHHH
T ss_pred hhcCCCchhh----------hhhhhhHHHHHHHH-----------------HHhccCcchhhhcCCCCCHH----HHHHH
Confidence 6542110000 00000001111111 1101110000 00001111 11100
Q ss_pred CCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhcc
Q psy1036 321 PSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSR 389 (399)
Q Consensus 321 ~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~ 389 (399)
.+ ...+..+ +.+.+......+..+.||||+|++.|+.++|+.|+..|+++++.+.+|.|+||.|++-
T Consensus 209 ~g-~~~~v~~-Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 209 KG-YTEVLKL-LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HT-CHHHHHH-HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred CC-cHHHHHH-HHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 11 1222222 2344444555667778999999999999999999999999999999999999999754
No 19
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=1.4e-27 Score=229.03 Aligned_cols=249 Identities=17% Similarity=0.099 Sum_probs=163.2
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
.....+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|+++|++
T Consensus 50 ~~~~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---- 116 (351)
T 3utm_A 50 NCHASDGRKSTPLHLAAGYNRVRIVQ--------LLLQHGADVHA-KDKGGLVPLHNACSYGHYEVTELLLKHGAC---- 116 (351)
T ss_dssp TCCCSSTTCCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHHHCCCC----
Confidence 33445677899999999999999999 88899988887 477899999999999999999999999987
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHh------
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFK------ 231 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~------ 231 (399)
++..|. .|+||||+|+..|+.+++++|+++| ++++..+..|.||+++|+.
T Consensus 117 ----------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 117 ----------------------VNAMDL-WQFTPLHEAASKNRVEVCSLLLSHG-ADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp ----------------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred ----------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCcchHHHhhhhhHHH
Confidence 788888 6999999999999999999999999 8999888777777665433
Q ss_pred ---------------CCCHHHHHHHHhccCchhhcccCCCCccchhhhh---chHHHHHHHHHhhccccccccChHHHHH
Q psy1036 232 ---------------MPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFD---NKEEALLFIKKNKKIRFKSFRNFQDAQN 293 (399)
Q Consensus 232 ---------------~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~k~~r~~~~~~~~~a~~ 293 (399)
.+..+.+..++............+.+.....+.. ...+.++.+... ++.+.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~------ 245 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNK------ 245 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCT------
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCC------
Confidence 3333333333332211111111111111111111 112222222211 111100000
Q ss_pred HHhcCCccCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCee
Q psy1036 294 FAYHGSCGVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYL 373 (399)
Q Consensus 294 ~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~ 373 (399)
.| .+|+. .++..+ ...+..+ +.+.+......+..+.||||+|++.|+.++|+.|+..|++.+
T Consensus 246 ---~g---------~t~L~----~A~~~g-~~~~v~~-Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 246 ---DF---------MTPLH----VAAERA-HNDVMEV-LHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp ---TC---------CCHHH----HHHHTT-CHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred ---CC---------CCHHH----HHHHcC-CHHHHHH-HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 00 01100 000000 1122222 223333444556677899999999999999999999999999
Q ss_pred ecCCCchhHHHHhhc
Q psy1036 374 VSSGDFPTILHVVCS 388 (399)
Q Consensus 374 ~~s~d~~~~l~~~~~ 388 (399)
+.+.+|.|+||.|..
T Consensus 308 ~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 308 IISLQGFTAAQMGNE 322 (351)
T ss_dssp CCCTTSCCHHHHSCH
T ss_pred CcCCCCCChhhhhhH
Confidence 999999999998843
No 20
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=1.2e-28 Score=240.62 Aligned_cols=224 Identities=11% Similarity=0.042 Sum_probs=172.7
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccC
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDS 163 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~ 163 (399)
..|.||||+||..|+.++|+.|+....+.|++.|++++. .+..|+||||+|+..|+.++|++|+++|++
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~-~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~---------- 191 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA-MDCDENTPLMLAVLARRRRLVAYLMKAGAD---------- 191 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC-CCCCCCCHHHHHHHcChHHHHHHHHHCCCC----------
Confidence 678999999999999999997776655667799999888 477899999999999999999999999988
Q ss_pred CChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCC--CCcccCCCCCCcHHHHHHhCC---CHHHH
Q psy1036 164 DTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAK--IQTSVRNKEGKTPLDVCFKMP---SVDSM 238 (399)
Q Consensus 164 ~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~--a~~~~~d~~G~TpL~~A~~~g---~~~iv 238 (399)
++..|. .|+||||+|+..|+.++|++|++++. ++++..|..|+||||+|+..+ +.+++
T Consensus 192 ----------------~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v 254 (373)
T 2fo1_E 192 ----------------PTIYNK-SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASA 254 (373)
T ss_dssp ----------------SCCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHH
T ss_pred ----------------CcccCC-CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHH
Confidence 788888 69999999999999999999999873 588899999999999999988 89999
Q ss_pred HHHHhccCchhhcc------cCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCC
Q psy1036 239 GPLSTKLTPTKVAT------KSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPAS 312 (399)
Q Consensus 239 ~~Ll~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~ 312 (399)
++|++.+....... ++......+++.. ..+..++++.+ ...+
T Consensus 255 ~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~-~~g~~~~v~~L-----------------l~~~-------------- 302 (373)
T 2fo1_E 255 KLLVEKGAKVDYDGAARKDSEKYKGRTALHYAA-QVSNMPIVKYL-----------------VGEK-------------- 302 (373)
T ss_dssp HHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHH-SSCCHHHHHHH-----------------HHHS--------------
T ss_pred HHHHHCCCCcccccccccCcccccCCCHHHHHH-HhCCHHHHHHH-----------------HHhc--------------
Confidence 99998874432210 1101111121111 11111111111 0011
Q ss_pred CCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhccc
Q psy1036 313 PSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 313 ~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
+......+..+.||||+|++.|+.++|+.|+..|+++++.+.+|.|+||.|++.-
T Consensus 303 -----------------------~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 303 -----------------------GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp -----------------------CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred -----------------------CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcC
Confidence 1122233456679999999999999999999999999999999999999998753
No 21
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=2.8e-28 Score=229.38 Aligned_cols=128 Identities=17% Similarity=0.149 Sum_probs=118.8
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+||..|+.++|+ +|++.|++++.. .|+||||+|+..|+.+++++|+++|++
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~------ 87 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVC--------TLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLD------ 87 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCC------
T ss_pred CccCCCCCCHHHHHHHcCCHHHHH--------HHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCC------
Confidence 445678899999999999999999 888999887764 489999999999999999999999987
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC-CcHHHHHHhCCCHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEG-KTPLDVCFKMPSVDSM 238 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G-~TpL~~A~~~g~~~iv 238 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..| .||||+|+..|+.+++
T Consensus 88 --------------------~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~~t~L~~A~~~~~~~~v 145 (285)
T 3kea_A 88 --------------------DSQFDD-KGNTALYYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYHAVMLNDVSIV 145 (285)
T ss_dssp --------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCSSSGGGSHHHHHHHTTCHHHH
T ss_pred --------------------CCCcCC-CCCcHHHHHHHcCCHHHHHHHHhcC-CCCCccCCCCCCCHHHHHHHcCCHHHH
Confidence 788998 6999999999999999999999999 9999999999 7999999999999999
Q ss_pred HHHHhccC
Q psy1036 239 GPLSTKLT 246 (399)
Q Consensus 239 ~~Ll~~~~ 246 (399)
++|++...
T Consensus 146 ~~Ll~~g~ 153 (285)
T 3kea_A 146 SYFLSEIP 153 (285)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCC
Confidence 99999864
No 22
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=214.84 Aligned_cols=217 Identities=14% Similarity=0.082 Sum_probs=165.7
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccc
Q psy1036 82 LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~ 161 (399)
.+..+.|+||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-------- 67 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCR--------ELVEAGYDVRQ-PDKENVTLLHWAAINNRIDLVKYYISKGAI-------- 67 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--------
T ss_pred cccccchHHHHHHHcCChHHHH--------HHHHcCCCcCC-CCCCCCCHHHHHHHhCCHHHHHHHHHcCCc--------
Confidence 3567788999999999999999 88889988777 466899999999999999999999999987
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
++..+...|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 68 ------------------~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 128 (240)
T 3eu9_A 68 ------------------VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG-ADPSLIDGEGCSCIHLAAQFGHTSIVAYL 128 (240)
T ss_dssp ------------------TTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------chhhcCCcCCChhHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCHHHHHHHH
Confidence 44433325999999999999999999999999 99999999999999999999999999999
Q ss_pred HhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCC
Q psy1036 242 STKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADP 321 (399)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~ 321 (399)
++...........+ ...++... . .+.... ..++.
T Consensus 129 l~~~~~~~~~~~~g--~t~l~~a~---------~--~~~~~~-------~~~~L-------------------------- 162 (240)
T 3eu9_A 129 IAKGQDVDMMDQNG--MTPLMWAA---------Y--RTHSVD-------PTRLL-------------------------- 162 (240)
T ss_dssp HHTTCCTTCCCTTS--CCHHHHHH---------H--HCCSST-------THHHH--------------------------
T ss_pred HhcCCCccccCCCC--CcHHHHHH---------H--hCChHH-------HHHHH--------------------------
Confidence 99864432222221 11221111 0 000000 00111
Q ss_pred CCCcccccccccCCCCCCCCCch-HHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhcccc
Q psy1036 322 SALPQVSSLAAAEKPSPFKSLKS-QELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSRCS 391 (399)
Q Consensus 322 ~~~~~~~~~~~~e~~~~~~~~~~-~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~~ 391 (399)
.+.+........ .+.|+||.|++.|+.++|+.|+..|+++++.+.+|.|+||.|++...
T Consensus 163 -----------~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 163 -----------LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp -----------HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred -----------HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 001111111222 45689999999999999999999999999999999999999987643
No 23
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=4.6e-27 Score=218.56 Aligned_cols=226 Identities=14% Similarity=0.021 Sum_probs=133.4
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC------CC
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP------AF 156 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~------~~ 156 (399)
+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|+++|++. +.
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 106 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVE--------LLLRHGADPVL-RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGF 106 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCC
T ss_pred CCCCCcHHHHHHHcCCHHHHH--------HHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccC
Confidence 456789999999999999999 88899988887 4678999999999999999999999999872 22
Q ss_pred ccccccCCChhHHH-HHHhhhccCCCCC----------CCCCCchHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCCCc
Q psy1036 157 TNLLYDSDTPSYIE-RSDILLDLYVNTP----------DKALNETPLHFAAKFGSVECVKRLIGC-AKIQTSVRNKEGKT 224 (399)
Q Consensus 157 ~~l~~a~~~~~~~~-~~~~~~~~~vn~~----------d~~~G~TpLh~Aa~~g~~~iv~~LL~~-g~a~~~~~d~~G~T 224 (399)
+++++++..+.... .+++..+.+++.. +. .|.||||+|+..|+.+++++|++. | ++++.+|..|+|
T Consensus 107 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~g~t 184 (285)
T 1wdy_A 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK-GGATALMDAAEKGHVEVLKILLDEMG-ADVNACDNMGRN 184 (285)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTC-CCCCHHHHHHHHTCHHHHHHHHHTSC-CCTTCCCTTSCC
T ss_pred CHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhcc-CCCcHHHHHHHcCCHHHHHHHHHhcC-CCCCccCCCCCC
Confidence 33333332222111 2333333334433 33 344555555555555555555544 3 444555555555
Q ss_pred HHHHHHhCCC----HHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCc
Q psy1036 225 PLDVCFKMPS----VDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSC 300 (399)
Q Consensus 225 pL~~A~~~g~----~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~ 300 (399)
|||+|+..++ .+++++|++...........+.+.....+...
T Consensus 185 ~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---------------------------------- 230 (285)
T 1wdy_A 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK---------------------------------- 230 (285)
T ss_dssp HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT----------------------------------
T ss_pred HHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC----------------------------------
Confidence 5555555444 44444444443222111111111111011000
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecC
Q psy1036 301 GVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSS 376 (399)
Q Consensus 301 ~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s 376 (399)
...+........+......+..+.||||.|++.|+.++|+.|+..|+++++.+
T Consensus 231 -----------------------~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 231 -----------------------HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp -----------------------CHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred -----------------------CHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 11111111111233344455677899999999999999999999999998764
No 24
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.3e-27 Score=216.85 Aligned_cols=214 Identities=15% Similarity=0.061 Sum_probs=147.1
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhhCChhhhhC-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccC
Q psy1036 85 QELVKLRKLIEKGNLADVRKLVWDNPRYLVSS-GDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDS 163 (399)
Q Consensus 85 ~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~-g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~ 163 (399)
.|.||||+||..|+.++|+ +|++. |.+++. .+..|+||||+||..|+.+++++|++.|++..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~--------~Ll~~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-------- 64 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALS--------KLLKFEGCEVHQ-RGAMGETALHIAALYDNLEAAMVLMEAAPELV-------- 64 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHH--------HHHTTTCSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG--------
T ss_pred CCCCHHHHHHHcCCHHHHH--------HHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhc--------
Confidence 4679999999999999999 77776 788777 47789999999999999999999999988621
Q ss_pred CChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-------------CCCcHHHHHH
Q psy1036 164 DTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNK-------------EGKTPLDVCF 230 (399)
Q Consensus 164 ~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~-------------~G~TpL~~A~ 230 (399)
....+..|. .|+||||+|+..|+.+++++|+++| ++++.++. .|+||||+|+
T Consensus 65 -------------~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 129 (232)
T 2rfa_A 65 -------------FEPMTSELY-EGQTALHIAVINQNVNLVRALLARG-ASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129 (232)
T ss_dssp -------------GCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHH
T ss_pred -------------cccccccCC-CCcCHHHHHHHcCCHHHHHHHHhCC-CCCCcccCCcceeecccccccCCCCHHHHHH
Confidence 011356676 5889999999999999999999888 78888765 6889999999
Q ss_pred hCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHH-HHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCC
Q psy1036 231 KMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEAL-LFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEA 309 (399)
Q Consensus 231 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~ 309 (399)
..|+.+++++|++.+.........+.+.....+.....+.. ++++.+ ...|. +.
T Consensus 130 ~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~L-----------------l~~g~-~~------- 184 (232)
T 2rfa_A 130 CVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLL-----------------LSYDG-GD------- 184 (232)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHH-----------------HHTTC-SC-------
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHH-----------------HhcCC-ch-------
Confidence 98899999988887654433333323222222222222222 111111 11111 00
Q ss_pred CCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCc
Q psy1036 310 PASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDF 379 (399)
Q Consensus 310 ~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~ 379 (399)
....+ ....+..+.||||+|++.|+.++|+.|+.+++......+.+
T Consensus 185 ----------------~~~~~--------~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 230 (232)
T 2rfa_A 185 ----------------HLKSL--------ELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHHHH 230 (232)
T ss_dssp ----------------SSCCG--------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-------
T ss_pred ----------------hhhhh--------hccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhccc
Confidence 00000 01234567899999999999999999999998876664443
No 25
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=2.2e-27 Score=206.13 Aligned_cols=129 Identities=25% Similarity=0.313 Sum_probs=120.3
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccc
Q psy1036 81 SLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLL 160 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~ 160 (399)
..+..|.||||+|+..|+.++++ +|++.|++++. ++..|+||||+||..|+.++|++|++.|++
T Consensus 32 ~~d~~g~t~l~~a~~~~~~~~~~--------~ll~~gad~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad------- 95 (169)
T 4gpm_A 32 ASDSDGRTPLHHAAENGHKEVVK--------LLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGAD------- 95 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHH--------HHHhcccchhh-hccCCCCHHHHHHHcCCHHHHHHHHHCcCC-------
Confidence 34678899999999999999999 88899999888 577899999999999999999999999998
Q ss_pred ccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHH
Q psy1036 161 YDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGP 240 (399)
Q Consensus 161 ~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~ 240 (399)
+|.+|. .|+||||+||..|+.++|++|+++| ++++.+|.+|+||||+|+.+|+.+++++
T Consensus 96 -------------------vn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~ 154 (169)
T 4gpm_A 96 -------------------VNAKDS-DGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKL 154 (169)
T ss_dssp -------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 899998 6999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhccC
Q psy1036 241 LSTKLT 246 (399)
Q Consensus 241 Ll~~~~ 246 (399)
|++++.
T Consensus 155 Ll~~GA 160 (169)
T 4gpm_A 155 LEKQGG 160 (169)
T ss_dssp HHTC--
T ss_pred HHHCCC
Confidence 999874
No 26
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=4.2e-27 Score=208.59 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=112.9
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCC-CCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGD-FPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~-~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
..+.||||.||..|+.+.|+ .|+..+. +++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~--------~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 64 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVK--------EILQDTTYQVDE-VDTEGNTPLNIAVHNNDIEIAKALIDRGAD--------- 64 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHH--------HHHTCTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred cccccHHHHHHHhccHHHHH--------HHHHcCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 35678999999999999999 6666664 6666 466899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
++.+|. .|+||||+|+..|+.+++++|++.+.++++.+|..|+||||+|+..|+.+++++|+
T Consensus 65 -----------------~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 126 (201)
T 3hra_A 65 -----------------INLQNS-ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126 (201)
T ss_dssp -----------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH
T ss_pred -----------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHH
Confidence 788888 69999999999999999999996555899999999999999999999999999999
Q ss_pred hcc
Q psy1036 243 TKL 245 (399)
Q Consensus 243 ~~~ 245 (399)
+..
T Consensus 127 ~~g 129 (201)
T 3hra_A 127 EDG 129 (201)
T ss_dssp HHC
T ss_pred HcC
Confidence 764
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=224.13 Aligned_cols=217 Identities=17% Similarity=0.058 Sum_probs=141.8
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCCh-----hhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPR-----YLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~-----~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
...+.|+||+|+..|+.+.+..++...|+ .++..+ ....+..|+||||+||..|+.+++++|++.|++
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~---- 84 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNP---LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA---- 84 (285)
T ss_dssp ------------------------------CCSEECCCCT---TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCc---ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC----
Confidence 45678999999999999888877665543 233332 122577899999999999999999999999887
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHH
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDS 237 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~i 237 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.++
T Consensus 85 ----------------------~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~t~L~~A~~~~~~~~ 140 (285)
T 3d9h_A 85 ----------------------VNIITA-DHVSPLHEACLGGHLSCVKILLKHG-AQVNGVTADWHTPLFNACVSGSWDC 140 (285)
T ss_dssp ----------------------SCEECT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHH
T ss_pred ----------------------CCCcCC-CCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCHHHH
Confidence 788998 6999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccc
Q psy1036 238 MGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVT 317 (399)
Q Consensus 238 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~ 317 (399)
+++|++........ +.+ ...++. ....+..++++.+ ...|
T Consensus 141 v~~Ll~~g~~~~~~--~~g-~t~L~~-A~~~g~~~~v~~L-----------------l~~g------------------- 180 (285)
T 3d9h_A 141 VNLLLQHGASVQPE--SDL-ASPIHE-AARRGHVECVNSL-----------------IAYG------------------- 180 (285)
T ss_dssp HHHHHHTTCCSSCS--CTT-SCHHHH-HHHHTCHHHHHHH-----------------HHTT-------------------
T ss_pred HHHHHHCCCCCCCC--CCC-CCHHHH-HHHcCCHHHHHHH-----------------HHCC-------------------
Confidence 99999987443221 111 111211 1111122222211 1111
Q ss_pred cCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhccc
Q psy1036 318 AADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 318 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
......+..+.|+||.|++.|+.++|+.|+..+++++. ..+|.|+||.|++..
T Consensus 181 -------------------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 181 -------------------GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp -------------------CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTT
T ss_pred -------------------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 11122334566999999999999999999999999995 778899999998754
No 28
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=7.3e-28 Score=219.40 Aligned_cols=128 Identities=20% Similarity=0.161 Sum_probs=109.4
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCC----CCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 82 LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGD----FPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~----~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
.+..|.||||+||..|+.++|+ +|++.+. +++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---- 70 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTM--------EVIRQVKGDLAFLNF-QNNLQQTPLHLAVITNQPEIAEALLGAGCD---- 70 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSS--------CCCC-----CCCCCC-CCTTCCCHHHHHHHTTCHHHHHCCCSCCCC----
T ss_pred CCCCCCchhHHHHHcCChhHHH--------HHHHHhhccHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----
Confidence 4677889999999999999999 6666653 4555 466899999999999999999999999887
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC------cccCCCCCCcHHHHHHh
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQ------TSVRNKEGKTPLDVCFK 231 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~------~~~~d~~G~TpL~~A~~ 231 (399)
++.+|. .|+||||+|+..|+.+++++|++.| ++ ++..|..|+||||+|+.
T Consensus 71 ----------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~g~t~L~~A~~ 126 (236)
T 1ikn_D 71 ----------------------PELRDF-RGNTPLHLACEQGCLASVGVLTQSC-TTPHLHSILKATNYNGHTCLHLASI 126 (236)
T ss_dssp ----------------------SCCCCT-TCCCHHHHHHHHTCHHHHHHHHHST-TTTSSSCGGGCCCTTCCCHHHHHHH
T ss_pred ----------------------CCCcCC-CCCCHHHHHHHcCCHHHHHHHHhcc-cchhHHHHhhccCCCCCCHHHHHHH
Confidence 788888 6999999999999999999999998 54 57788999999999999
Q ss_pred CCCHHHHHHHHhccC
Q psy1036 232 MPSVDSMGPLSTKLT 246 (399)
Q Consensus 232 ~g~~~iv~~Ll~~~~ 246 (399)
.|+.+++++|++.+.
T Consensus 127 ~~~~~~v~~Ll~~g~ 141 (236)
T 1ikn_D 127 HGYLGIVELLVSLGA 141 (236)
T ss_dssp TTCHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998764
No 29
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=8.1e-28 Score=221.82 Aligned_cols=197 Identities=17% Similarity=0.145 Sum_probs=158.2
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcc---cCCCCCCcHHHHHHHc---CCHHHHHHHHhccCCCCCccc
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTI---LHEGCRYNALHVSTKA---VNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~---~~d~~g~T~LH~Aa~~---g~~~iv~~Ll~~ga~~~~~~l 159 (399)
|.||||+||..|+.+.|+.|+ ++|++.|.+++. ..+..|+||||+|+.. |+.+++++|++.|++.+....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll----~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 77 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLL----EYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP 77 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHH----HHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC
T ss_pred CccHHHHHHHcCCHHHHHHHH----HHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh
Confidence 689999999999998776555 267778888776 3477899999999999 999999999999987432221
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC-------------CCcHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKE-------------GKTPL 226 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~-------------G~TpL 226 (399)
. ........|. .|+||||+|+..|+.++|++|+++| ++++.+|.. |+|||
T Consensus 78 ~---------------~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~g~tpL 140 (256)
T 2etb_A 78 L---------------VNAQCTDEFY-QGHSALHIAIEKRSLQCVKLLVENG-ADVHLRACGRFFQKHQGTCFYFGELPL 140 (256)
T ss_dssp G---------------GGCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCSSSCCCSCSSHH
T ss_pred h---------------cccccccccc-cCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccccccccccccccccCCCCHH
Confidence 1 0111233455 6999999999999999999999999 999999986 99999
Q ss_pred HHHHhCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCC
Q psy1036 227 DVCFKMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSL 306 (399)
Q Consensus 227 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~ 306 (399)
|+|+..|+.+++++|++... .|.
T Consensus 141 ~~A~~~~~~~~v~~Ll~~~~--------------------------------------------------~ga------- 163 (256)
T 2etb_A 141 SLAACTKQWDVVTYLLENPH--------------------------------------------------QPA------- 163 (256)
T ss_dssp HHHHHTTCHHHHHHHHHCSS--------------------------------------------------CCC-------
T ss_pred HHHHHcCCHHHHHHHHhccc--------------------------------------------------cCC-------
Confidence 99999999999999997320 000
Q ss_pred CCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHh--hcCHH-------HHHHHhhcCCCe-----
Q psy1036 307 LEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIE--KGNLA-------DVRKLVWDNPRY----- 372 (399)
Q Consensus 307 ~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq--~G~~~-------~v~~lv~~~~~~----- 372 (399)
.....+..+.||||.|++ .|+.+ +|+.|+..|+++
T Consensus 164 -------------------------------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~ 212 (256)
T 2etb_A 164 -------------------------------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 212 (256)
T ss_dssp -------------------------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred -------------------------------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc
Confidence 001122355789999999 88988 999999999999
Q ss_pred --eecCCCchhHHHHhhcccc
Q psy1036 373 --LVSSGDFPTILHVVCSRCS 391 (399)
Q Consensus 373 --~~~s~d~~~~l~~~~~~~~ 391 (399)
++.+.+|.|+||.|++..+
T Consensus 213 ~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 213 LEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp GGGCCCTTSCCHHHHHHHTTC
T ss_pred cccccCCCCCCHHHHHHHhCC
Confidence 8999999999999987643
No 30
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=9.5e-27 Score=199.27 Aligned_cols=122 Identities=20% Similarity=0.238 Sum_probs=113.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCC
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDT 165 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~ 165 (399)
..||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+. |+.+++++|++.|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~--------~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------------ 62 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLT--------SLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLLLRGAN------------ 62 (162)
T ss_dssp CHHHHHHHHHHTCHHHHH--------HHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHHHTTCC------------
T ss_pred HhhHHHHHHHcCCHHHHH--------HHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHHHcCCC------------
Confidence 458999999999999999 88888988877 47789999999999 999999999999887
Q ss_pred hhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 166 PSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 166 ~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++..
T Consensus 63 --------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 126 (162)
T 1ihb_A 63 --------------PDLKDR-TGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126 (162)
T ss_dssp --------------TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred --------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc
Confidence 788888 6999999999999999999999999 999999999999999999999999999999753
No 31
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=1.1e-26 Score=214.10 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=116.3
Q ss_pred hhhhcCCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy1036 70 LAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLE 149 (399)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~ 149 (399)
.+...........+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++
T Consensus 41 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~ 111 (253)
T 1yyh_A 41 DFIYQGASLHNQTDRTGETALHLAARYSRSDAAK--------RLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIR 111 (253)
T ss_dssp -----------CCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHccCCcccccCCCCCcHHHHHHHcCCHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3333333333345678999999999999999999 88899988887 47789999999999999999999999
Q ss_pred ccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHH
Q psy1036 150 IIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVC 229 (399)
Q Consensus 150 ~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A 229 (399)
.++. +++..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|
T Consensus 112 ~~~~-------------------------~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 112 NRAT-------------------------DLDARMH-DGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWA 164 (253)
T ss_dssp STTS-------------------------CTTCCCT-TCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSCBHHHHH
T ss_pred cCCC-------------------------CccccCC-CCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCCCHHHHH
Confidence 9873 1677777 6889999999888888999999888 88888888899999999
Q ss_pred HhCCCHHHHHHHHhccCchhh
Q psy1036 230 FKMPSVDSMGPLSTKLTPTKV 250 (399)
Q Consensus 230 ~~~g~~~iv~~Ll~~~~~~~~ 250 (399)
+..|+.+++++|++.+.....
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDM 185 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC
T ss_pred HHcCCHHHHHHHHHcCCCCCC
Confidence 988889999988887754433
No 32
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=6.1e-27 Score=202.79 Aligned_cols=170 Identities=14% Similarity=0.109 Sum_probs=139.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCC
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDT 165 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~ 165 (399)
+.||||.||..|+.++|+ +|++.+.......+..|+||||+|+..|+.+++++|++.|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~--------~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 61 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLK--------EHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD------------ 61 (172)
T ss_dssp --CCHHHHHHTTCHHHHH--------HHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------------
T ss_pred chhhHHHHHHcCCHHHHH--------HHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 356999999999999999 666766552223577899999999999999999999999987
Q ss_pred hhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 166 PSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 166 ~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
++..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++..
T Consensus 62 --------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 62 --------------PHILAK-ERESALSLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125 (172)
T ss_dssp --------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred --------------chhhcc-cCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 788888 6999999999999999999999999 999999999999999999999999999998653
Q ss_pred CchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCc
Q psy1036 246 TPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALP 325 (399)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~ 325 (399)
...
T Consensus 126 a~~----------------------------------------------------------------------------- 128 (172)
T 3v30_A 126 ADL----------------------------------------------------------------------------- 128 (172)
T ss_dssp CCT-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhH
Q psy1036 326 QVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTI 382 (399)
Q Consensus 326 ~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~ 382 (399)
...+..+.||||+|++.|+.++|+.|+..++++...+..+.|+
T Consensus 129 --------------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 129 --------------TTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp --------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred --------------cccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 0011234589999999999999999999999999886666553
No 33
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=215.51 Aligned_cols=212 Identities=14% Similarity=0.069 Sum_probs=162.0
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 94 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVK--------ILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQHGAS------ 94 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHH--------HHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------
Confidence 445677899999999999999999 88899988887 477899999999999999999999999987
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMG 239 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~ 239 (399)
++..+ .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 95 --------------------~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 95 --------------------VQPES--DLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp --------------------SSCSC--TTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred --------------------CCCCC--CCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 55433 4999999999999999999999999 899999999999999999999999999
Q ss_pred HHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccC
Q psy1036 240 PLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAA 319 (399)
Q Consensus 240 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~ 319 (399)
+|++.+..... ... ....++... ..+..++++.+ ...|
T Consensus 152 ~Ll~~g~~~~~-~~~--g~t~Lh~A~-~~~~~~~v~~L-----------------l~~g--------------------- 189 (261)
T 2xai_A 152 KLLESGADVNQ-GKG--QDSPLHAVA-RTASEELACLL-----------------MDFG--------------------- 189 (261)
T ss_dssp HHHHHTCCTTC-CBT--TBCHHHHHH-HHTCHHHHHHH-----------------HHTT---------------------
T ss_pred HHHHcCCCCCC-CCC--CCChHHHHH-HcCCHHHHHHH-----------------HHcC---------------------
Confidence 99998754332 111 122222211 11111222111 1011
Q ss_pred CCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCC--------CeeecCCCchhHHHHhhccc
Q psy1036 320 DPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNP--------RYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 320 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~--------~~~~~s~d~~~~l~~~~~~~ 390 (399)
......+..+.||+|+|+++|+ +++.|+..++ ++++....|.|+||.+.++.
T Consensus 190 -----------------ad~~~~d~~g~tpl~~A~~~~~--~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~ 249 (261)
T 2xai_A 190 -----------------ADTQAKNAEGKRPVELVPPESP--LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249 (261)
T ss_dssp -----------------CCTTCCCTTSCCGGGGSCTTCT--HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSS
T ss_pred -----------------CCCCCcCCCCCChhhhcccccc--HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccC
Confidence 1223345567789999998776 7888888765 45677889999999998875
No 34
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=7.7e-26 Score=217.12 Aligned_cols=159 Identities=15% Similarity=0.093 Sum_probs=99.4
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCC-------------------------hhhhhCCCCCcccCCCCCCcHHHHHHH
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNP-------------------------RYLVSSGDFPTILHEGCRYNALHVSTK 137 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p-------------------------~~Ll~~g~~~~~~~d~~g~T~LH~Aa~ 137 (399)
+..|+||||+||..|+.++|+.||+.+. ..++..+.+++. .+..|+||||+|+.
T Consensus 56 ~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~g~t~l~~A~~ 134 (337)
T 4g8k_A 56 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAV 134 (337)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-BCTTCCBHHHHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhh-hccCCCCHHHHHHH
Confidence 3458999999999999999996665432 233444555555 46678888888888
Q ss_pred cCCHHHHHHHHhccCCCC----------------CccccccCCChhHHH--HHHhhhccCCCCCCCCCCchHHHHHHHcC
Q psy1036 138 AVNPAMTEMLLEIIGNPA----------------FTNLLYDSDTPSYIE--RSDILLDLYVNTPDKALNETPLHFAAKFG 199 (399)
Q Consensus 138 ~g~~~iv~~Ll~~ga~~~----------------~~~l~~a~~~~~~~~--~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g 199 (399)
.|+.+++++|++.|++.+ .+++++++..+.... .++...++++|.+|. .|+||||+++..+
T Consensus 135 ~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~-~g~t~l~~~~~~~ 213 (337)
T 4g8k_A 135 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN-MGRNALIHALLSS 213 (337)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHHS
T ss_pred cCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCC-CCCcHHHHHHHHc
Confidence 888888888888887643 234444432222111 222223556666665 4666666655443
Q ss_pred C----HHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 200 S----VECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 200 ~----~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
. ..++++|+++| ++++.+|..|+||||+|+..|+.++++.|++.
T Consensus 214 ~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 214 DDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 261 (337)
T ss_dssp CTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred CcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence 2 23556666666 56666666666666666666666666666553
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.7e-26 Score=209.23 Aligned_cols=132 Identities=17% Similarity=0.167 Sum_probs=117.5
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|+++|++
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 98 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEIVE--------FLLQLGVPVND-KDDAGWSPLHIAASAGXDEIVKALLVKGAH------ 98 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHH--------HHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------
T ss_pred hcCCCCCCCHHHHHHHcCcHHHHH--------HHHHhCCCCCC-cCCCCCCHHHHHHHcCHHHHHHHHHHcCCC------
Confidence 345678899999999999999999 88899988887 477899999999999999999999999987
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMG 239 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~ 239 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 99 --------------------~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 99 --------------------VNAVNQ-NGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp --------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred --------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 778887 6999999999999999999999999 899999999999999999999999999
Q ss_pred HHHhccCch
Q psy1036 240 PLSTKLTPT 248 (399)
Q Consensus 240 ~Ll~~~~~~ 248 (399)
+|++.....
T Consensus 157 ~Ll~~g~~~ 165 (231)
T 3aji_A 157 ILLFYKAST 165 (231)
T ss_dssp HHHHTTCCS
T ss_pred HHHhcCCCc
Confidence 999876443
No 36
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=1.1e-26 Score=225.46 Aligned_cols=153 Identities=18% Similarity=0.140 Sum_probs=131.3
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhc----cCC--
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEI----IGN-- 153 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~----ga~-- 153 (399)
...+..|.||||+||..|+.++|+ +|++.|++++. ..|+||||+|+..|+.+++++|++. |++
T Consensus 47 ~~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 115 (364)
T 3ljn_A 47 TIQNRFGCTALHLACKFGCVDTAK--------YLASVGEVHSL---WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPE 115 (364)
T ss_dssp TCCCTTCCCHHHHHHHHCCHHHHH--------HHHHHCCCCCC---BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHH--------HHHHCCCCccc---cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHH
Confidence 344677889999999999999999 88888875543 3689999999999999999999998 443
Q ss_pred ---------------------CCCccccccCCCh--hH-HHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHh
Q psy1036 154 ---------------------PAFTNLLYDSDTP--SY-IERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIG 209 (399)
Q Consensus 154 ---------------------~~~~~l~~a~~~~--~~-~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~ 209 (399)
.+.+++++++..+ .. +..+++..++++|..|. .|+||||+|+..|+.++|++|++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~ 194 (364)
T 3ljn_A 116 SLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK-ADETPLMRAMEFRNREALDLMMD 194 (364)
T ss_dssp HHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHh
Confidence 3567888887665 22 22566667899999998 69999999999999999999999
Q ss_pred CCCCC-----cccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 210 CAKIQ-----TSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 210 ~g~a~-----~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
+| ++ ++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 195 ~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 234 (364)
T 3ljn_A 195 TV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG 234 (364)
T ss_dssp HC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT
T ss_pred cc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 99 78 9999999999999999999999999999753
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=9e-27 Score=217.00 Aligned_cols=202 Identities=13% Similarity=0.068 Sum_probs=155.9
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCc---ccCCCCCCcHHHHHHHc---CCHHHHHHHHhccCC
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPT---ILHEGCRYNALHVSTKA---VNPAMTEMLLEIIGN 153 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~---~~~d~~g~T~LH~Aa~~---g~~~iv~~Ll~~ga~ 153 (399)
...+..|.||||+||..|+.++|+.||+. +.+.+.+.+ ...+..|+||||+||.. |+.+++++|++.|++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPF----LQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHH----HHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHH----HhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 34578899999999999999999955522 223454433 23467899999999987 999999999999876
Q ss_pred CCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-------------
Q psy1036 154 PAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNK------------- 220 (399)
Q Consensus 154 ~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~------------- 220 (399)
.+... ......++..|. .|+||||+|+..|+.++|++|+++| ++++.++.
T Consensus 83 ~~~~~---------------~~i~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~ 145 (273)
T 2pnn_A 83 TDSLK---------------QFVNASYTDSYY-KGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGF 145 (273)
T ss_dssp TTCHH---------------HHHTCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCC
T ss_pred ccchh---------------HHhhcccccccC-CCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccccccccccccccccc
Confidence 33211 111222344666 6999999999999999999999999 99999997
Q ss_pred -CCCcHHHHHHhCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCC
Q psy1036 221 -EGKTPLDVCFKMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGS 299 (399)
Q Consensus 221 -~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~ 299 (399)
.|+||||+|+..|+.+++++|++... .|.
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~--------------------------------------------------~ga 175 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSW--------------------------------------------------QPA 175 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSS--------------------------------------------------CCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccc--------------------------------------------------CCC
Confidence 79999999999999999999997421 000
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcC---------HHHHHHHhhcCC
Q psy1036 300 CGVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGN---------LADVRKLVWDNP 370 (399)
Q Consensus 300 ~~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~---------~~~v~~lv~~~~ 370 (399)
.....+..+.||||.|++.|+ .++|+.|+..|+
T Consensus 176 --------------------------------------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 217 (273)
T 2pnn_A 176 --------------------------------------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA 217 (273)
T ss_dssp --------------------------------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh
Confidence 001112345689999999999 899999999999
Q ss_pred Cee-------ecCCCchhHHHHhhccc
Q psy1036 371 RYL-------VSSGDFPTILHVVCSRC 390 (399)
Q Consensus 371 ~~~-------~~s~d~~~~l~~~~~~~ 390 (399)
+++ +...+|.|+||.|++..
T Consensus 218 ~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 218 KLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp HHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred hcccccccccccCCCCCCHHHHHHHhC
Confidence 997 57999999999998754
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=9.8e-27 Score=223.17 Aligned_cols=220 Identities=12% Similarity=-0.039 Sum_probs=155.7
Q ss_pred HHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhH
Q psy1036 89 KLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSY 168 (399)
Q Consensus 89 ~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~ 168 (399)
.+|.|+..+..++++ +|++.|.+++...+..|+||||+||..|+.++|++||++|++
T Consensus 100 ~~~~a~~~~~~~~~~--------~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad--------------- 156 (327)
T 1sw6_A 100 QQHVSFDSLLQEVND--------AFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN--------------- 156 (327)
T ss_dssp ----CHHHHHHHHHH--------HCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------------
T ss_pred hhHHHHHhhHHHHHH--------HHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---------------
Confidence 468888888888888 888999999885577899999999999999999999999998
Q ss_pred HHHHHhhhccCCCCCCCCCCchHHHHHHHcCC---HHHHHHHHhCCCCCcccCCCCCCcHHHHHHh----CCCHHHHHHH
Q psy1036 169 IERSDILLDLYVNTPDKALNETPLHFAAKFGS---VECVKRLIGCAKIQTSVRNKEGKTPLDVCFK----MPSVDSMGPL 241 (399)
Q Consensus 169 ~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~---~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~----~g~~~iv~~L 241 (399)
+|.+|. .|+||||+|+..|+ .++++.|++++.++++.+|..|+||||+|+. .|+.+++++|
T Consensus 157 -----------~n~~d~-~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~L 224 (327)
T 1sw6_A 157 -----------RLYGDN-MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY 224 (327)
T ss_dssp -----------TTBCCT-TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHH
T ss_pred -----------CCCcCC-CCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHH
Confidence 889998 69999999999998 7888888888767899999999999999999 9999999999
Q ss_pred HhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCC
Q psy1036 242 STKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADP 321 (399)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~ 321 (399)
++.+........ +. .+...... +++..... ...| .+|+ +...
T Consensus 225 l~~~~~~~~~~~--~~--~i~~~~~~----------~g~~~~~~---------~~~g---------~t~L----~~a~-- 266 (327)
T 1sw6_A 225 LDILMGWIVKKQ--NR--PIQSGTNE----------KESKPNDK---------NGER---------KDSI----LENL-- 266 (327)
T ss_dssp HHHHHHHHHHGG--GC--CEEEC--------------------------------------------CHH----HHHC--
T ss_pred HHHHHHHHhccc--ch--HHHhhhhc----------ccCCcccc---------cccC---------CChh----HHHH--
Confidence 986522111100 00 00000000 00000000 0000 0000 0000
Q ss_pred CCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhcc
Q psy1036 322 SALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSR 389 (399)
Q Consensus 322 ~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~ 389 (399)
.+.-++.. .....+..+.||||+|++.|+.++|+.|+..|+++++.+.+|.|+||.|++.
T Consensus 267 ----~~~~Ll~~----~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 267 ----DLKWIIAN----MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ----SHHHHHHH----TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred ----HHHHHHHh----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 00001110 1234456778999999999999999999999999999999999999999864
No 39
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.2e-25 Score=187.36 Aligned_cols=126 Identities=25% Similarity=0.274 Sum_probs=116.9
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccc
Q psy1036 82 LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~ 161 (399)
+...+.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------- 72 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVR--------ILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLLKNGAD-------- 72 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--------
T ss_pred ccccccHHHHHHHHhCCHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------
Confidence 4567889999999999999999 88899988887 477899999999999999999999999887
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 73 ------------------~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 73 ------------------VNAVDA-IGFTPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp ------------------TTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------CCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 788998 6999999999999999999999999 99999999999999999999999999999
Q ss_pred Hhc
Q psy1036 242 STK 244 (399)
Q Consensus 242 l~~ 244 (399)
++.
T Consensus 133 l~~ 135 (136)
T 2jab_A 133 QKL 135 (136)
T ss_dssp HHC
T ss_pred HHc
Confidence 875
No 40
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=1.8e-25 Score=193.24 Aligned_cols=151 Identities=24% Similarity=0.235 Sum_probs=96.6
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC------C
Q psy1036 82 LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP------A 155 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~------~ 155 (399)
+...+.++||+||+.|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|+++|++. +
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 80 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVR--------ILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCcccchHHHHHHcCCHHHHH--------HHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 3456678999999999999999 88899988887 4678999999999999999999999999872 2
Q ss_pred CccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCC
Q psy1036 156 FTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPS 234 (399)
Q Consensus 156 ~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~ 234 (399)
.+++++++..+.... .+++..+++++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+
T Consensus 81 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDNGN 158 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCC
Confidence 233444433222211 333334444555554 3555555555555555555555555 4555555555555555555555
Q ss_pred HHHHHHHHh
Q psy1036 235 VDSMGPLST 243 (399)
Q Consensus 235 ~~iv~~Ll~ 243 (399)
.+++++|++
T Consensus 159 ~~~~~~L~~ 167 (169)
T 2y1l_E 159 EDLAEILQK 167 (169)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 555555543
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=3.4e-26 Score=211.23 Aligned_cols=139 Identities=14% Similarity=0.097 Sum_probs=114.9
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCccc---CCCCCCcHHHHHH---HcCCHHHHHHHHhccCCCCCc
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTIL---HEGCRYNALHVST---KAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~---~d~~g~T~LH~Aa---~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
.-++|+||.||+.|+.+.|+.|++ +|++.|.+++.. .+..|+||||+|+ ..|+.+++++|++.|++++..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~----~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLS----FLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHH----HHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHH----HHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 457899999999999998886552 455677766642 2367999999999 679999999999998764321
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCC--------------CCCC
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRN--------------KEGK 223 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d--------------~~G~ 223 (399)
. ...+..++..|. .|+||||+||..|+.++|++|+++| ++++.+| ..|+
T Consensus 79 ~---------------~~~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~ 141 (260)
T 3jxi_A 79 R---------------EFINSPFRDVYY-RGQTALHIAIERRCKHYVELLVEKG-ADVHAQARGRFFQPKDEGGYFYFGE 141 (260)
T ss_dssp H---------------HHHTCCBCCSSE-ESBCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCEECCCSSSCCCCSCCSCS
T ss_pred H---------------hhhccccccccc-CCCCHHHHHHHcCCHHHHHHHHhCC-CCcCccccccccCcccccccccCCC
Confidence 1 112344667777 6999999999999999999999999 9999999 6899
Q ss_pred cHHHHHHhCCCHHHHHHHHh
Q psy1036 224 TPLDVCFKMPSVDSMGPLST 243 (399)
Q Consensus 224 TpL~~A~~~g~~~iv~~Ll~ 243 (399)
||||+|+..|+.+++++|++
T Consensus 142 tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 142 LPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp SHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999998
No 42
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=5.5e-26 Score=189.48 Aligned_cols=129 Identities=20% Similarity=0.208 Sum_probs=119.8
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcc
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTN 158 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~ 158 (399)
+...+..+.||||+|+..|+.++|+ +|++.|.+++. .+..|+||||+|+. |+.+++++|+++|++
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~----- 69 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVR--------QLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLLLHGAE----- 69 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-----
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHH--------HHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-----
Confidence 3445678889999999999999999 88899988887 46789999999999 999999999999987
Q ss_pred ccccCCChhHHHHHHhhhccCCCCCCCCC-CchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHH
Q psy1036 159 LLYDSDTPSYIERSDILLDLYVNTPDKAL-NETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDS 237 (399)
Q Consensus 159 l~~a~~~~~~~~~~~~~~~~~vn~~d~~~-G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~i 237 (399)
+|.+|. . |+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++.++
T Consensus 70 ---------------------~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~ 126 (136)
T 1d9s_A 70 ---------------------PNCADP-ATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDI 126 (136)
T ss_dssp ---------------------SSCCBT-TTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHH
T ss_pred ---------------------CCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHH
Confidence 788998 7 999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhcc
Q psy1036 238 MGPLSTKL 245 (399)
Q Consensus 238 v~~Ll~~~ 245 (399)
+++|++.+
T Consensus 127 ~~~Ll~~G 134 (136)
T 1d9s_A 127 ARYLHAAT 134 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99999865
No 43
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=9.7e-26 Score=205.16 Aligned_cols=140 Identities=19% Similarity=0.180 Sum_probs=119.8
Q ss_pred CCCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCC
Q psy1036 77 SPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAF 156 (399)
Q Consensus 77 ~~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~ 156 (399)
..+...+..|.||||+|+..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.++..
T Consensus 37 ~~~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-- 105 (241)
T 1k1a_A 37 RELDIYNNLRQTPLHLAVITTLPSVVR--------LLVTAGASPMA-LDRHGQTAAHLACEHRSPTCLRALLDSAAPG-- 105 (241)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTT--
T ss_pred CCCCcccccCCCHHHHHHHcCCHHHHH--------HHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc--
Confidence 344555678899999999999999999 88899988887 4678999999999999999999999998741
Q ss_pred ccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCcHHHHHHhCCCH
Q psy1036 157 TNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRN-KEGKTPLDVCFKMPSV 235 (399)
Q Consensus 157 ~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d-~~G~TpL~~A~~~g~~ 235 (399)
+.+++..|. .|+||||+|+..|+.+++++|+++| ++++..+ ..|+||||+|+..|+.
T Consensus 106 --------------------~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 106 --------------------TLDLEARNY-DGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp --------------------SCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred --------------------cccccccCc-CCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHHHHHcCCH
Confidence 123677887 6999999999999999999999999 8888888 7899999999999999
Q ss_pred HHHHHHHhccCchh
Q psy1036 236 DSMGPLSTKLTPTK 249 (399)
Q Consensus 236 ~iv~~Ll~~~~~~~ 249 (399)
+++++|++.+....
T Consensus 164 ~~v~~Ll~~g~~~~ 177 (241)
T 1k1a_A 164 SMVQLLLQHGANVN 177 (241)
T ss_dssp HHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCC
Confidence 99999998865433
No 44
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=1.5e-25 Score=210.81 Aligned_cols=235 Identities=12% Similarity=0.022 Sum_probs=160.9
Q ss_pred HHHHcCCHHHHHHHHhhCChh--hhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHH
Q psy1036 92 KLIEKGNLADVRKLVWDNPRY--LVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYI 169 (399)
Q Consensus 92 ~Aa~~G~~~~v~~Ll~~~p~~--Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~ 169 (399)
.++..|..+.++.++...... ....+.... .+..|.||||+||..|+.++|++|++.|++
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~---------------- 65 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTK--VKFDDGAVFLAACSSGDTEEVLRLLERGAD---------------- 65 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCC--CEECHHHHHHHHHHHTCHHHHHHHHHHCCC----------------
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccc--cccCCccHHHHHHHcCCHHHHHHHHHcCCC----------------
Confidence 467778888888666553311 111111111 133577999999999999999999999987
Q ss_pred HHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchh
Q psy1036 170 ERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTK 249 (399)
Q Consensus 170 ~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~ 249 (399)
+|..|. .|+||||+||..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|++......
T Consensus 66 ----------~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 133 (299)
T 1s70_B 66 ----------INYANV-DGLTALHQACIDDNVDMVKFLVENG-ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG 133 (299)
T ss_dssp ----------TTCBCT-TCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred ----------CcccCC-CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 788998 6999999999999999999999999 9999999999999999999999999999999875443
Q ss_pred hcccCCCCccchhhhhchHHHHHHHHHh---hccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCcc
Q psy1036 250 VATKSEGTEEGERVFDNKEEALLFIKKN---KKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALPQ 326 (399)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~---k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~ 326 (399)
.....+. ..++ +....+..++++.. .+...... ......... ..
T Consensus 134 ~~~~~g~--t~l~-~A~~~~~~~~~~~ll~~~~~~~~~~--~~~~~~~~~-~~--------------------------- 180 (299)
T 1s70_B 134 AVNSEGD--TPLD-IAEEEAMEELLQNEVNRQGVDIEAA--RKEEERIML-RD--------------------------- 180 (299)
T ss_dssp CCCTTSC--CHHH-HCCSHHHHHHHHHHHHHHTCCHHHH--HHHHHHHHH-HH---------------------------
T ss_pred CcCCCCC--CHHH-HHHhcchHHHHHHHHhhcCCCchhh--hhhhhhHHH-HH---------------------------
Confidence 3333322 2222 22233334444321 22111110 000000000 00
Q ss_pred cccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCeeecCCCchhHHHHhhccc
Q psy1036 327 VSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 327 ~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
+..+ ..............+.|+||.|+..|+.++|+.|+..|+++++.+.+|.|+||.|++..
T Consensus 181 ~~~~-l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 181 ARQW-LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp HHHH-HHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHH-HhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcC
Confidence 0000 00011111122345679999999999999999999999999999999999999998753
No 45
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=1.5e-25 Score=208.55 Aligned_cols=157 Identities=18% Similarity=0.138 Sum_probs=100.0
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.+++......
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~ga~~~~-~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 109 (282)
T 1oy3_D 39 DLQNDLGQTALHLAAILGEASTVE--------KLYAAGAGVLV-AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDAS 109 (282)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHH--------HHHHTTCCSSC-CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-
T ss_pred cccCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhH
Confidence 345678899999999999999999 88899999887 477899999999999999999999998865221100
Q ss_pred -------------------cccCCChhHHH--HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccC
Q psy1036 160 -------------------LYDSDTPSYIE--RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVR 218 (399)
Q Consensus 160 -------------------~~a~~~~~~~~--~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~ 218 (399)
+.......... ......+.+++.+|. .|+||||+|+..|+.++|++|+++| ++++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~ 187 (282)
T 1oy3_D 110 DTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAG-ADLNKP 187 (282)
T ss_dssp ----------------------------------CCCGGGGTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCC
T ss_pred HHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcC-CCCCCC
Confidence 00000000000 111122334555555 4666666666666666666666666 555555
Q ss_pred CCC-CCcHHHHHHhCCCHHHHHHHHhccCc
Q psy1036 219 NKE-GKTPLDVCFKMPSVDSMGPLSTKLTP 247 (399)
Q Consensus 219 d~~-G~TpL~~A~~~g~~~iv~~Ll~~~~~ 247 (399)
+.. |+||||+|+.+|+.+++++|++.+..
T Consensus 188 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad 217 (282)
T 1oy3_D 188 EPTCGRTPLHLAVEAQAASVLELLLKAGAD 217 (282)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 533 66666666666666666666655433
No 46
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=2.5e-25 Score=196.18 Aligned_cols=152 Identities=21% Similarity=0.077 Sum_probs=95.2
Q ss_pred CCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC------
Q psy1036 81 SLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP------ 154 (399)
Q Consensus 81 ~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~------ 154 (399)
..+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++.
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 100 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAID--------KLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS 100 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHH--------HHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHH--------HHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 35678899999999999999999 77788887776 4668999999999999999999999999872
Q ss_pred CCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCC
Q psy1036 155 AFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMP 233 (399)
Q Consensus 155 ~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g 233 (399)
+.+++++++..+.... .+++..++++|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhC
Confidence 2233333332221111 233333444444444 3444444444444444444444444 444444444444444444444
Q ss_pred CHHHHHHHHh
Q psy1036 234 SVDSMGPLST 243 (399)
Q Consensus 234 ~~~iv~~Ll~ 243 (399)
+.+++++|++
T Consensus 179 ~~~~v~~Ll~ 188 (192)
T 2rfm_A 179 RQEVIKIFTE 188 (192)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 4444444443
No 47
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=5e-25 Score=215.02 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=104.1
Q ss_pred CCCCCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhcc---
Q psy1036 75 KPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEII--- 151 (399)
Q Consensus 75 ~~~~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~g--- 151 (399)
....+...+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.+
T Consensus 155 ~ga~vn~~d~~g~TpL~~A~~~g~~~iv~--------~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 225 (373)
T 2fo1_E 155 AGADVNAMDCDENTPLMLAVLARRRRLVA--------YLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLK 225 (373)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHHTCHHHHH--------HHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH
T ss_pred cCCCCcCCCCCCCCHHHHHHHcChHHHHH--------HHHHCCCCCcc-cCCCCCCHHHHHHHCCCHHHHHHHHhcCccc
Confidence 34455667789999999999999999999 88899999887 4778999999999999999999999987
Q ss_pred CCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcC---CHHHHHHHHhCCCCCccc--------CCC
Q psy1036 152 GNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFG---SVECVKRLIGCAKIQTSV--------RNK 220 (399)
Q Consensus 152 a~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g---~~~iv~~LL~~g~a~~~~--------~d~ 220 (399)
++ ++..|. .|+||||+|+..| +.+++++|+++| ++++. +|.
T Consensus 226 ~~--------------------------~~~~d~-~g~t~L~~A~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~ 277 (373)
T 2fo1_E 226 GD--------------------------IEELDR-NGMTALMIVAHNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKY 277 (373)
T ss_dssp HT--------------------------TSCCCT-TSCCHHHHHHHSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSC
T ss_pred cC--------------------------hhhcCC-CCCCHHHHHHHhCCcchHHHHHHHHHCC-CCcccccccccCcccc
Confidence 33 566666 4777777777666 666777777776 66654 455
Q ss_pred CCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 221 EGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 221 ~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
.|+||||+|+..|+.+++++|++..
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~ 302 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEK 302 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHS
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhc
Confidence 6777777777777777777776554
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=7.6e-26 Score=208.57 Aligned_cols=128 Identities=19% Similarity=0.072 Sum_probs=108.0
Q ss_pred CCccchHHHHHHHHc---CCHHHHHHHHhhCChhhhhCCCCCccc----------CCCCCCcHHHHHHHcCCHHHHHHHH
Q psy1036 82 LKSQELVKLRKLIEK---GNLADVRKLVWDNPRYLVSSGDFPTIL----------HEGCRYNALHVSTKAVNPAMTEMLL 148 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~---G~~~~v~~Ll~~~p~~Ll~~g~~~~~~----------~d~~g~T~LH~Aa~~g~~~iv~~Ll 148 (399)
.+..|.||||+||.. |+.++|+ +|++.|++++.. .+..|+||||+|+..|+.+++++|+
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~--------~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 110 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIM--------PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLV 110 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHH--------HHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHccccchHHHHH--------HHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHH
Confidence 467889999999999 9999999 666666443321 2457999999999999999999999
Q ss_pred hccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCC------------CCchHHHHHHHcCCHHHHHHHHh---CCCC
Q psy1036 149 EIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKA------------LNETPLHFAAKFGSVECVKRLIG---CAKI 213 (399)
Q Consensus 149 ~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~------------~G~TpLh~Aa~~g~~~iv~~LL~---~g~a 213 (399)
++|++ +|..|.. .|+||||+|+..|+.++|++|++ +| +
T Consensus 111 ~~ga~--------------------------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g-a 163 (256)
T 2etb_A 111 ENGAD--------------------------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP-A 163 (256)
T ss_dssp HTTCC--------------------------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-C
T ss_pred HcCCC--------------------------CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-C
Confidence 99998 4555441 29999999999999999999999 88 9
Q ss_pred CcccCCCCCCcHHHHHHh--CCCHH-------HHHHHHhc
Q psy1036 214 QTSVRNKEGKTPLDVCFK--MPSVD-------SMGPLSTK 244 (399)
Q Consensus 214 ~~~~~d~~G~TpL~~A~~--~g~~~-------iv~~Ll~~ 244 (399)
+++.+|..|+||||+|+. .++.+ ++++|++.
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ 203 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM 203 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc
Confidence 999999999999999999 88888 66666653
No 49
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=1.2e-24 Score=196.45 Aligned_cols=165 Identities=18% Similarity=0.142 Sum_probs=136.2
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCC--CCcccCCCCCCcHHHHHHHcCCHHHHHHHHhcc--CC--
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGD--FPTILHEGCRYNALHVSTKAVNPAMTEMLLEII--GN-- 153 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~--~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~g--a~-- 153 (399)
...+..|.||||+|+..|+.++|+ +|++.|+ +.+...+..|+||||+|+..|+.+++++|++.| ++
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 101 (228)
T 2dzn_A 30 LQKDQDGRIPLHWSVSFQAHEITS--------FLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN 101 (228)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHH--------HHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc
Confidence 335678899999999999999999 8888884 433335678999999999999999999999998 44
Q ss_pred ----CCCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHH
Q psy1036 154 ----PAFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDV 228 (399)
Q Consensus 154 ----~~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~ 228 (399)
.+.+++++++..+.... .+++..+++++.+|. .|+||||+|+..|+.+++++|++.|.++++.+|..|+||||+
T Consensus 102 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~ 180 (228)
T 2dzn_A 102 KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK-FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 180 (228)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHH
T ss_pred cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHH
Confidence 34567777765544332 566667889999998 699999999999999999999999988999999999999999
Q ss_pred HHhCCCHHHHHHHH-hccCchhhccc
Q psy1036 229 CFKMPSVDSMGPLS-TKLTPTKVATK 253 (399)
Q Consensus 229 A~~~g~~~iv~~Ll-~~~~~~~~~~~ 253 (399)
|+..|+.+++++|+ +.+........
T Consensus 181 A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp HHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred HHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 99999999999999 66654443333
No 50
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=4.2e-25 Score=201.07 Aligned_cols=160 Identities=17% Similarity=0.141 Sum_probs=123.8
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC---
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP--- 154 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~--- 154 (399)
.+...+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.|+++
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 107 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAE--------ALLGAGCDPEL-RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH 107 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHH--------CCCSCCCCSCC-CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHH
Confidence 34556778999999999999999999 99999999888 4778999999999999999999999998752
Q ss_pred ---------CCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCc
Q psy1036 155 ---------AFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKT 224 (399)
Q Consensus 155 ---------~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~T 224 (399)
+.+++++++..+.... .+++..++++|.++...|+||||+|+..|+.++|++|+++| ++++.+|..|+|
T Consensus 108 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t 186 (236)
T 1ikn_D 108 SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYS 186 (236)
T ss_dssp CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCC
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCC
Confidence 4455666554443222 45555667777776424777777777777777777777777 777777777777
Q ss_pred HHHHHHhCCCHHHHHHHHhccCc
Q psy1036 225 PLDVCFKMPSVDSMGPLSTKLTP 247 (399)
Q Consensus 225 pL~~A~~~g~~~iv~~Ll~~~~~ 247 (399)
|||+|+.+|+.+++++|++.+..
T Consensus 187 pl~~A~~~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 187 PYQLTWGRPSTRIQQQLGQLTLE 209 (236)
T ss_dssp GGGGCTTSSCHHHHHHHHTTSCG
T ss_pred HHHHHHccCchHHHHHHHHcchh
Confidence 77777777777777777777653
No 51
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1.4e-24 Score=184.37 Aligned_cols=125 Identities=22% Similarity=0.182 Sum_probs=103.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCC
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDT 165 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~ 165 (399)
..|+||.|+..|+.++|+ +|++.|.+.+ .+..|+||||+|+..|+.+++++|++.|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~--------~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 59 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVR--------ILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------------ 59 (153)
T ss_dssp HHHHHHHHHHHTCHHHHH--------HHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred ccHHHHHHHHcCCHHHHH--------HHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 458999999999999999 7778887655 366799999999999999999999999887
Q ss_pred hhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 166 PSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 166 ~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 60 --------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 123 (153)
T 1awc_B 60 --------------RDARTK-VDRTPLHMAASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123 (153)
T ss_dssp --------------TTCCCT-TCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred --------------CCCCCC-CCCCHHHHHHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 667776 5788888888888888888888877 777778888888888888888888888887776
Q ss_pred Cch
Q psy1036 246 TPT 248 (399)
Q Consensus 246 ~~~ 248 (399)
...
T Consensus 124 a~~ 126 (153)
T 1awc_B 124 ADV 126 (153)
T ss_dssp CCT
T ss_pred CCc
Confidence 443
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=9.9e-25 Score=187.89 Aligned_cols=124 Identities=18% Similarity=0.201 Sum_probs=90.5
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCC
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDT 165 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~ 165 (399)
|.||||.||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 3 ~~t~L~~A~~~g~~~~v~--------~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 61 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLA--------TRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------------ 61 (167)
T ss_dssp TCCCHHHHHHTTCHHHHH--------HHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred CcchHHHHHHCCCHHHHH--------HHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 568999999999999999 77788877776 467899999999999999999999999987
Q ss_pred hhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 166 PSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 166 ~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
++..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++..
T Consensus 62 --------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (167)
T 3v31_A 62 --------------PQLLGK-GRESALSLACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125 (167)
T ss_dssp --------------TTCCCT-TCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred --------------CCCcCC-CCCcHHHHHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 455554 4555555555555555555555555 555555555555555555555555555555554
Q ss_pred C
Q psy1036 246 T 246 (399)
Q Consensus 246 ~ 246 (399)
.
T Consensus 126 ~ 126 (167)
T 3v31_A 126 A 126 (167)
T ss_dssp C
T ss_pred C
Confidence 3
No 53
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=2.6e-24 Score=195.02 Aligned_cols=201 Identities=17% Similarity=0.122 Sum_probs=151.3
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcc
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTN 158 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~ 158 (399)
+...+..|.||||+|+..|+.++|+ +|++.|.+++...+..|+||||+|+..|+.+++++|++.|++
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~----- 101 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVK--------YYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD----- 101 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC-----
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHH--------HHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC-----
Confidence 3445677889999999999999999 888888877765666799999999999999999999999887
Q ss_pred ccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCC-HHH
Q psy1036 159 LLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPS-VDS 237 (399)
Q Consensus 159 l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~-~~i 237 (399)
++..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .++
T Consensus 102 ---------------------~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~ 158 (240)
T 3eu9_A 102 ---------------------PSLIDG-EGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDP 158 (240)
T ss_dssp ---------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTT
T ss_pred ---------------------CcccCC-CCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHH
Confidence 788888 6999999999999999999999999 8999999999999999996665 889
Q ss_pred HHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccc
Q psy1036 238 MGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVT 317 (399)
Q Consensus 238 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~ 317 (399)
+++|++............+ ...++. ....+..++++.+ ...|.
T Consensus 159 ~~~L~~~~~~~~~~~~~~g-~t~L~~-A~~~~~~~~v~~L-----------------l~~g~------------------ 201 (240)
T 3eu9_A 159 TRLLLTFNVSVNLGDKYHK-NTALHW-AVLAGNTTVISLL-----------------LEAGA------------------ 201 (240)
T ss_dssp HHHHHHTTCCTTCCCTTTC-CCHHHH-HHHHTCHHHHHHH-----------------HHHTC------------------
T ss_pred HHHHHhcCCCcchhhccCC-CcHHHH-HHHcCCHHHHHHH-----------------HHcCC------------------
Confidence 9999988754443322111 122221 1111122222211 11111
Q ss_pred cCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHHhhcCCCe
Q psy1036 318 AADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRY 372 (399)
Q Consensus 318 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~lv~~~~~~ 372 (399)
.....+..+.||||+|++.|+.++|+.|+..+++-
T Consensus 202 --------------------~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 202 --------------------NVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp --------------------CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred --------------------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 11223345679999999999999999999988764
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=3.3e-26 Score=209.53 Aligned_cols=126 Identities=17% Similarity=0.085 Sum_probs=86.1
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccc
Q psy1036 82 LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~ 161 (399)
|...|.||||.|+..|+.+.++ .|+++|++++. +..|.||||+|+..|+.+++++|++.|++
T Consensus 1 p~~~g~t~L~~a~~~~~~~~~~--------~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------- 62 (239)
T 1ycs_B 1 PEITGQVSLPPGKRTNLRKTGS--------ERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDD-------- 62 (239)
T ss_dssp ----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS--------
T ss_pred CCccccccCchhhhhhhHHHHH--------HHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCC--------
Confidence 4567889999999999999999 88899988876 34689999999999999999999999987
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|.+|. .|+||||+||..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 63 ------------------~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~L 122 (239)
T 1ycs_B 63 ------------------PSLPND-EGITALHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFL 122 (239)
T ss_dssp ------------------CCCCCT-TSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 789998 6999999999999999999999999 99999999999999999999999999999
Q ss_pred Hhcc
Q psy1036 242 STKL 245 (399)
Q Consensus 242 l~~~ 245 (399)
++.+
T Consensus 123 l~~g 126 (239)
T 1ycs_B 123 VESG 126 (239)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 8753
No 55
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=1.6e-24 Score=191.87 Aligned_cols=156 Identities=10% Similarity=0.089 Sum_probs=124.2
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccC-C---
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIG-N--- 153 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga-~--- 153 (399)
.....+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.+. +
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 101 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAK--------ALIDRGADINL-QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNK 101 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhccCccccc
Confidence 34445677899999999999999999 88899998887 46789999999999999999999995443 3
Q ss_pred ---CCCccccccCCChhHHH-HHHhhhc-cCCCCCCCCCCchHHHHHHHcCC-----HHHHHHHHhCCCCCcccCCCCCC
Q psy1036 154 ---PAFTNLLYDSDTPSYIE-RSDILLD-LYVNTPDKALNETPLHFAAKFGS-----VECVKRLIGCAKIQTSVRNKEGK 223 (399)
Q Consensus 154 ---~~~~~l~~a~~~~~~~~-~~~~~~~-~~vn~~d~~~G~TpLh~Aa~~g~-----~~iv~~LL~~g~a~~~~~d~~G~ 223 (399)
.+.+++++++..+.... .+++..+ .++|.+|. .|+||||+|+..++ .+++++|+++| ++++.+|..|+
T Consensus 102 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~ 179 (201)
T 3hra_A 102 HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND-FGYTALIEAVGLREGNQLYQDIVKLLMENG-ADQSIKDNSGR 179 (201)
T ss_dssp CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT-TSCCHHHHHHHSSCCSHHHHHHHHHHHHTT-CCTTCCCTTSC
T ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC-CCCCHHHHHHHhccchhhHHHHHHHHHHCC-CCCCccCCCCC
Confidence 34556666665443322 4444555 77888887 68888888888887 88888888888 88888888888
Q ss_pred cHHHHHHhCCCHHHHHHHHhc
Q psy1036 224 TPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 224 TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
||||+|+.+|+.+++++|++.
T Consensus 180 t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 180 TAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp CHHHHHHHHTCHHHHHHHHTC
T ss_pred CHHHHHHHcCCHhHHHHHHhc
Confidence 888888888888888888865
No 56
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=3.6e-24 Score=194.59 Aligned_cols=167 Identities=17% Similarity=0.225 Sum_probs=141.5
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhcc-CC-----
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEII-GN----- 153 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~g-a~----- 153 (399)
...+..|.||||+|+..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.| .+
T Consensus 38 ~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 108 (237)
T 3b7b_A 38 DTCSEDQRTPLMEAAENNHLEAVK--------YLIKAGALVDP-KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD 108 (237)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHH--------HHHTTTCCCCC-CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCC
T ss_pred CccCCCCCCHHHHHHHhCCHHHHH--------HHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC
Confidence 444667889999999999999999 88899988877 4678999999999999999999999998 33
Q ss_pred -CCCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHh
Q psy1036 154 -PAFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFK 231 (399)
Q Consensus 154 -~~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~ 231 (399)
.+.+++++++..+.... .+++..+.+++.+|. .|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 109 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 109 DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN-EENICLHWAAFSGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAAR 186 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHH
Confidence 35567777765544332 566667888999998 6999999999999999999999999 9999999999999999999
Q ss_pred CCCHHHHHHHHhccCchhhcccCCCC
Q psy1036 232 MPSVDSMGPLSTKLTPTKVATKSEGT 257 (399)
Q Consensus 232 ~g~~~iv~~Ll~~~~~~~~~~~~~~~ 257 (399)
.|+.+++++|++++.......+.+.+
T Consensus 187 ~~~~~~v~~Ll~~gad~~~~d~~g~t 212 (237)
T 3b7b_A 187 ENRYDCVVLFLSRDSDVTLKNKEGET 212 (237)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred hCCHhHHHHHHHcCCCCCccCCCCCC
Confidence 99999999999998665544444333
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=5.7e-25 Score=190.30 Aligned_cols=130 Identities=22% Similarity=0.290 Sum_probs=120.8
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 94 (172)
T 3v30_A 30 NKPDERGFTPLIWASAFGEIETVR--------FLLEWGADPHI-LAKERESALSLASTGGYTDIVGLLLERDVD------ 94 (172)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHH--------HHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCchh-hcccCCCHHHHHHHCCCHHHHHHHHHcCCC------
Confidence 444678889999999999999999 88899988887 467899999999999999999999999887
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMG 239 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~ 239 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 95 --------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 95 --------------------INIYDW-NGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp --------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred --------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 788998 6999999999999999999999999 999999999999999999999999999
Q ss_pred HHHhccC
Q psy1036 240 PLSTKLT 246 (399)
Q Consensus 240 ~Ll~~~~ 246 (399)
+|++.+.
T Consensus 153 ~L~~~~~ 159 (172)
T 3v30_A 153 VIENHIL 159 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998763
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=2.3e-25 Score=207.42 Aligned_cols=140 Identities=16% Similarity=0.072 Sum_probs=105.5
Q ss_pred CccchHHHHHHHHc---CCHHHHHHHHhhCChhhhhCCCCCc-------c---cCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy1036 83 KSQELVKLRKLIEK---GNLADVRKLVWDNPRYLVSSGDFPT-------I---LHEGCRYNALHVSTKAVNPAMTEMLLE 149 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~---G~~~~v~~Ll~~~p~~Ll~~g~~~~-------~---~~d~~g~T~LH~Aa~~g~~~iv~~Ll~ 149 (399)
+..|.||||+||.. |+.++|+ +|++.|+++. . ..+..|+||||+|+..|+.++|++|++
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~--------~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 122 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIA--------LLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE 122 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHH--------HHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHhcCChHHHH--------HHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 57889999999987 9999999 5555543211 0 135579999999999999999999999
Q ss_pred ccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHh---CCCCCcccCCCCCCcHH
Q psy1036 150 IIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIG---CAKIQTSVRNKEGKTPL 226 (399)
Q Consensus 150 ~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~---~g~a~~~~~d~~G~TpL 226 (399)
+|++.+....... ....+.+..+. .|+||||+|+..|+.++|++|++ +| ++++.+|..|+|||
T Consensus 123 ~ga~~~~~~~~~~------------~~~~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-ad~~~~d~~g~tpL 188 (273)
T 2pnn_A 123 NGADVQAAANGDF------------FKKTKGRPGFY-FGELPLSLAACTNQLAIVKFLLQNSWQP-ADISARDSVGNTVL 188 (273)
T ss_dssp TTCCTTCCBCSGG------------GSSCSSSCCCC-SCBSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHH
T ss_pred CCCCcCccccccc------------ccccccccccc-CCCCHHHHHHHcCCHHHHHHHHhcccCC-CCceeeCCCCCcHH
Confidence 9998332211000 00001222333 59999999999999999999999 88 99999999999999
Q ss_pred HHHHhCCC---------HHHHHHHHhc
Q psy1036 227 DVCFKMPS---------VDSMGPLSTK 244 (399)
Q Consensus 227 ~~A~~~g~---------~~iv~~Ll~~ 244 (399)
|+|+..|+ .+++++|++.
T Consensus 189 h~A~~~~~~~~~~~~~~~~~v~~Ll~~ 215 (273)
T 2pnn_A 189 HALVEVADNTVDNTKFVTSMYNEILIL 215 (273)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCcchhHHHHHHHHHHHHHHh
Confidence 99999877 4555555543
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=4.3e-24 Score=183.50 Aligned_cols=136 Identities=20% Similarity=0.180 Sum_probs=117.2
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+.++.|+||.|+..|+.++|+ +|++.+.......+..|+||||+|+..|+.+++++|++.|++
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~--------~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 67 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVK--------KLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD--------- 67 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHH--------HHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred cchhhHHHHHHHHhCCHHHHH--------HHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC---------
Confidence 567889999999999999999 666644322223566799999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+
T Consensus 68 -----------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 128 (165)
T 3twr_A 68 -----------------VHAKDK-GGLVPLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLLL 128 (165)
T ss_dssp -----------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------------CCccCC-CCCCHHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 788898 6999999999999999999999999 899999999999999999999999999999
Q ss_pred hccCchhhcccC
Q psy1036 243 TKLTPTKVATKS 254 (399)
Q Consensus 243 ~~~~~~~~~~~~ 254 (399)
+...........
T Consensus 129 ~~ga~~~~~~~~ 140 (165)
T 3twr_A 129 QHGADPTKKNRD 140 (165)
T ss_dssp HTTCCTTCCCTT
T ss_pred HcCCCCcccCCC
Confidence 987554444333
No 60
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=9.2e-25 Score=198.01 Aligned_cols=146 Identities=18% Similarity=0.074 Sum_probs=104.0
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCc----ccCCCCCCcHHHHHHHcCCHHHHHHHHhccCC
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPT----ILHEGCRYNALHVSTKAVNPAMTEMLLEIIGN 153 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~----~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~ 153 (399)
.....+..|.||||+||..|+.++|+ +|++.|+++. ...+..|+||||+|+..|+.+++++|+++|++
T Consensus 29 ~~~~~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 100 (232)
T 2rfa_A 29 EVHQRGAMGETALHIAALYDNLEAAM--------VLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS 100 (232)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHH--------HHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHH--------HHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 34455778899999999999999999 5656664431 12456799999999999999999999999988
Q ss_pred CCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCC
Q psy1036 154 PAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMP 233 (399)
Q Consensus 154 ~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g 233 (399)
.+....... .....+..|. .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|
T Consensus 101 ~~~~~~~~~-------------~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~ 165 (232)
T 2rfa_A 101 VSARATGSV-------------FHYRPHNLIY-YGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHILILQP 165 (232)
T ss_dssp TTCCCCSGG-------------GSCCTTCSCC-CCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCS
T ss_pred CCcccCCcc-------------eeeccccccc-CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcC
Confidence 443211000 0011334454 4777777777777777777777777 777777777777777777777
Q ss_pred CHHHH----HHHHhccC
Q psy1036 234 SVDSM----GPLSTKLT 246 (399)
Q Consensus 234 ~~~iv----~~Ll~~~~ 246 (399)
+.+++ ++|++...
T Consensus 166 ~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 166 NKTFACQMYNLLLSYDG 182 (232)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHhcCC
Confidence 77766 66666654
No 61
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=1e-24 Score=203.51 Aligned_cols=140 Identities=19% Similarity=0.157 Sum_probs=111.6
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcc
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTN 158 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~ 158 (399)
....+..|+||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..++.+++++|++.|++
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~--------~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~----- 144 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIP--------LLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSNAK----- 144 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHH--------HHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCCCC-----
Confidence 3445566777777777777777777 66666666665 355677777777777777777777777665
Q ss_pred ccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHH
Q psy1036 159 LLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSM 238 (399)
Q Consensus 159 l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv 238 (399)
+|.+|. .|+||||+||..|+.++|++||++| ++++.+|..|+||||+|+..|+.+++
T Consensus 145 ---------------------~n~~d~-~g~TpL~~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v 201 (269)
T 4b93_B 145 ---------------------PNKKDL-SGNTPLIYACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVV 201 (269)
T ss_dssp ---------------------SCCCCT-TCCCHHHHHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred ---------------------CCCCCC-CCCCHHHHHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHH
Confidence 899998 6999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhccCchhhcccCC
Q psy1036 239 GPLSTKLTPTKVATKSE 255 (399)
Q Consensus 239 ~~Ll~~~~~~~~~~~~~ 255 (399)
++|++.+.......+.+
T Consensus 202 ~~Ll~~Gad~~~~d~~G 218 (269)
T 4b93_B 202 ELLLLHGASVQVLNKRQ 218 (269)
T ss_dssp HHHHHTTCCSCCCCTTS
T ss_pred HHHHHCCCCCCCcCCCC
Confidence 99999886544444443
No 62
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.3e-24 Score=175.81 Aligned_cols=124 Identities=26% Similarity=0.375 Sum_probs=115.7
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCC
Q psy1036 85 QELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSD 164 (399)
Q Consensus 85 ~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~ 164 (399)
+|.||||+|+..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~--------~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------- 60 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVK--------LLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGAD----------- 60 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHH--------HHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCccHHHHHHHcCcHHHHH--------HHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-----------
Confidence 3679999999999999999 88888887776 466899999999999999999999999887
Q ss_pred ChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 165 TPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 165 ~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 61 ---------------~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 61 ---------------VNAKDK-NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp ---------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------------CcccCC-CCCcHHHHHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 788888 6999999999999999999999999 99999999999999999999999999999987
Q ss_pred c
Q psy1036 245 L 245 (399)
Q Consensus 245 ~ 245 (399)
+
T Consensus 124 G 124 (126)
T 1n0r_A 124 G 124 (126)
T ss_dssp T
T ss_pred C
Confidence 5
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=2.3e-24 Score=183.07 Aligned_cols=122 Identities=22% Similarity=0.249 Sum_probs=114.5
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+..|.||||+|+..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 92 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTE--------VLLRAGVSRDA-RTKVDRTPLHMAASEGHANIVEVLLKHGAD--------- 92 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHH--------HHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC---------
T ss_pred CCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHHHcCCC---------
Confidence 556789999999999999999 88899988887 477899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 93 -----------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 93 -----------------VNAKDM-LKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp -----------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -----------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 788998 6999999999999999999999999 99999999999999999999999999887
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1.5e-24 Score=186.42 Aligned_cols=130 Identities=23% Similarity=0.260 Sum_probs=118.3
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCc
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFT 157 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~ 157 (399)
.....+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---- 100 (165)
T 3twr_A 34 NCRDIEGRQSTPLHFAAGYNRVSVVE--------YLLQHGADVHA-KDKGGLVPLHNACSYGHYEVAELLVKHGAV---- 100 (165)
T ss_dssp TCCCTTTTCCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred CccccccCCCCHHHHHHHcChHHHHH--------HHHhcCCCCCc-cCCCCCCHHHHHHHcCcHHHHHHHHhCCCC----
Confidence 34445667889999999999999999 88899988887 477899999999999999999999999987
Q ss_pred cccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHH
Q psy1036 158 NLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDS 237 (399)
Q Consensus 158 ~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~i 237 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+. ++.++
T Consensus 101 ----------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 101 ----------------------VNVADL-WKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp ----------------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred ----------------------CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhc-CChHH
Confidence 788998 6999999999999999999999999 9999999999999999877 99999
Q ss_pred HHHHHhcc
Q psy1036 238 MGPLSTKL 245 (399)
Q Consensus 238 v~~Ll~~~ 245 (399)
+++|++++
T Consensus 156 ~~~L~~~g 163 (165)
T 3twr_A 156 QDLLRGDA 163 (165)
T ss_dssp HHHHHTC-
T ss_pred HHHHhhcc
Confidence 99999764
No 65
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=5.2e-25 Score=187.92 Aligned_cols=128 Identities=22% Similarity=0.244 Sum_probs=116.5
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
...+.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+ .|+.+++++|++.|++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~--------- 69 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVR--------ALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHGAE--------- 69 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHH--------HHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTTCC---------
T ss_pred CccchHHHHHHHHcCCHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcCCC---------
Confidence 566789999999999999999 88899988887 4678999999986 9999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCch-HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNET-PLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~T-pLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|.+|. .|+| |||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 70 -----------------~~~~d~-~g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~L 130 (156)
T 1bi7_B 70 -----------------PNCADP-ATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYL 130 (156)
T ss_dssp -----------------CCCCCT-TTCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred -----------------CCCcCC-CCCcHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHHH
Confidence 889998 6999 999999999999999999999 99999999999999999999999999999
Q ss_pred HhccCch
Q psy1036 242 STKLTPT 248 (399)
Q Consensus 242 l~~~~~~ 248 (399)
++.+...
T Consensus 131 l~~ga~~ 137 (156)
T 1bi7_B 131 RAAAGGT 137 (156)
T ss_dssp SSCC---
T ss_pred HHcCCCC
Confidence 9987543
No 66
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=6.7e-24 Score=185.03 Aligned_cols=137 Identities=19% Similarity=0.249 Sum_probs=117.6
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCC-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSG-DFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g-~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
.+++++||.||..|+.++|+ +|++.+ .+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~--------~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 64 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVR--------LWLDNTENDLNQ-GDDHGFSPLHWACREGRSAVVEMLIMRGAR--------- 64 (179)
T ss_dssp ----CCHHHHHHHTCHHHHH--------HHHHCTTSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHHHcCCHHHHH--------HHHhcCcccccc-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---------
Confidence 35667999999999999999 666664 44555 577899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
+|..|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+
T Consensus 65 -----------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 65 -----------------INVMNR-GDDTPLHLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp -----------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------------CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 788888 6999999999999999999999999 999999999999999999999999999999
Q ss_pred hccCchhhcccCCCC
Q psy1036 243 TKLTPTKVATKSEGT 257 (399)
Q Consensus 243 ~~~~~~~~~~~~~~~ 257 (399)
+.+.........+.+
T Consensus 126 ~~ga~~~~~~~~g~t 140 (179)
T 3f6q_A 126 ANGALVSICNKYGEM 140 (179)
T ss_dssp HTTCCSSBCCTTSCC
T ss_pred HCCCCcchhccCCCC
Confidence 988655444444333
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=3.8e-24 Score=184.19 Aligned_cols=130 Identities=22% Similarity=0.307 Sum_probs=120.7
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcc
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTN 158 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~ 158 (399)
+...+..|.||||+|+..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----- 94 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVE--------FLLQNGADPQL-LGKGRESALSLACSKGYTDIVKMLLDCGVD----- 94 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-----
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHH--------HHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----
Confidence 4445678899999999999999999 88899988887 467899999999999999999999999987
Q ss_pred ccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHH
Q psy1036 159 LLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSM 238 (399)
Q Consensus 159 l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv 238 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++
T Consensus 95 ---------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 95 ---------------------VNEYDW-NGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp ---------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred ---------------------CCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 788998 6999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhcc
Q psy1036 239 GPLSTKL 245 (399)
Q Consensus 239 ~~Ll~~~ 245 (399)
++|++++
T Consensus 152 ~~L~~~~ 158 (167)
T 3v31_A 152 QVIESHL 158 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=2.7e-24 Score=183.87 Aligned_cols=129 Identities=22% Similarity=0.279 Sum_probs=117.9
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+..|.||||+|+. |+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 95 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIAR--------RLLLRGANPDL-KDRTGFAVIHDAARAGFLDTLQTLLEFQAD------ 95 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------
T ss_pred cccCccCccHHHHHHc-CcHHHHH--------HHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 3346678899999999 9999999 88899988887 477899999999999999999999999987
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC-cccCCCCCCcHHHHHHhCCCHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQ-TSVRNKEGKTPLDVCFKMPSVDSM 238 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~-~~~~d~~G~TpL~~A~~~g~~~iv 238 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++ ++.+|..|+||||+|+.+|+.+++
T Consensus 96 --------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 96 --------------------VNIEDN-EGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp --------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred --------------------CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 789998 6999999999999999999999999 66 699999999999999999999999
Q ss_pred HHHHhccC
Q psy1036 239 GPLSTKLT 246 (399)
Q Consensus 239 ~~Ll~~~~ 246 (399)
++|++++.
T Consensus 154 ~~Ll~~GA 161 (162)
T 1ihb_A 154 SLMQANGA 161 (162)
T ss_dssp HHHHHTC-
T ss_pred HHHHHhCC
Confidence 99998763
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=5.2e-24 Score=187.74 Aligned_cols=123 Identities=19% Similarity=0.067 Sum_probs=104.7
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC----
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP---- 154 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~---- 154 (399)
....+..|.||||+|+..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++.
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAE--------KLLSKGSNVNT-KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHH--------HHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred cccccccCccHHHHHHHcCCHHHHH--------HHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 3445677899999999999999999 88888988877 4778999999999999999999999999873
Q ss_pred --CCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC
Q psy1036 155 --AFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCA 211 (399)
Q Consensus 155 --~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g 211 (399)
+.+++++++..+.... .+++..+++++.+|. .|+||||+|+..|+.+++++|++++
T Consensus 132 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 132 LEGETPLIVASKYGRSEIVKKLLELGADISARDL-TGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 4567777765443332 566677899999998 6999999999999999999999876
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=6.4e-24 Score=180.56 Aligned_cols=145 Identities=21% Similarity=0.211 Sum_probs=68.8
Q ss_pred hHHHHHHHHcCCHHHHHHHHhhCChhhhhC-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC------CCccc
Q psy1036 87 LVKLRKLIEKGNLADVRKLVWDNPRYLVSS-GDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP------AFTNL 159 (399)
Q Consensus 87 ~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~-g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~------~~~~l 159 (399)
.|+||+||..|+.++|+ +|++. +.+++. .+..|+||||+ |..|+.+++++|++.|++. +.+++
T Consensus 3 ~~~L~~A~~~g~~~~v~--------~ll~~~~~~~~~-~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 72 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVR--------RLLHRELVHPDA-LNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPV 72 (156)
T ss_dssp HHHHHHHHHHTCHHHHH--------HHHHTTCCCTTC-CCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred chHHHHHHHhCCHHHHH--------HHHHhhCcCccc-cCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 35556666666666555 33333 123333 24445555555 5555555555555555541 01111
Q ss_pred cccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHH
Q psy1036 160 LYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSM 238 (399)
Q Consensus 160 ~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv 238 (399)
++++..+.... .+++..++++|.+|. .|+||||+|+..|+.+++++|++. ++++.+|..|+||||+|+..|+.+++
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 11111110000 111111122555555 455566665555555555555555 45555555555566555555555555
Q ss_pred HHHHhc
Q psy1036 239 GPLSTK 244 (399)
Q Consensus 239 ~~Ll~~ 244 (399)
++|+++
T Consensus 150 ~~Ll~~ 155 (156)
T 1bd8_A 150 DILQGH 155 (156)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 555543
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=2.5e-24 Score=201.43 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=116.5
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCC-CCcccCCCCCCcHHHHHH-----HcCCHHHHHHHHhccCC
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGD-FPTILHEGCRYNALHVST-----KAVNPAMTEMLLEIIGN 153 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~-~~~~~~d~~g~T~LH~Aa-----~~g~~~iv~~Ll~~ga~ 153 (399)
...+..|.||||+||..|+.++|+ +|++.|+ +++. .+..|+||||+|+ ..++.+++++|++.|..
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~--------~Ll~~g~~~~~~-~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~ 175 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQ--------QLLDSGVCKVDK-QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI 175 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTSCCCTTC-CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHH--------HHHHCCCCcCCC-CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC
Confidence 345677888999999999999998 7778886 6555 4667888888888 56788888888888865
Q ss_pred ------CCCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHh-CCCCCcccCCCCCCcH
Q psy1036 154 ------PAFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIG-CAKIQTSVRNKEGKTP 225 (399)
Q Consensus 154 ------~~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~-~g~a~~~~~d~~G~Tp 225 (399)
.+.+++++++..+.... .+++..++++|.+|. .|+||||+|+..|+.++|++|++ .| ++++.+|..|+||
T Consensus 176 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~g-ad~~~~d~~g~Tp 253 (276)
T 4hbd_A 176 NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTALMCACEHGHKEIAGLLLAVPS-CDISLTDRDGSTA 253 (276)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHTSTT-CCTTCCCTTSCCH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCCCHHHHHHHHhcCC-CCCcCcCCCCCCH
Confidence 24566676665443322 555566777777777 58888888888888888888887 66 7888888888888
Q ss_pred HHHHHhCCCHHHHHHHHhcc
Q psy1036 226 LDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 226 L~~A~~~g~~~iv~~Ll~~~ 245 (399)
||+|+.+|+.+++++|+++.
T Consensus 254 L~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 254 LMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHhcc
Confidence 88888888888888887764
No 72
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=2.9e-23 Score=186.79 Aligned_cols=157 Identities=14% Similarity=0.083 Sum_probs=101.7
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCC-CCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCC--
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGD-FPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNP-- 154 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~-~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~-- 154 (399)
.....+..|.||||+|+..|+.++|+ +|++.+. +++. .+..|+||||+|+..|+.+++++|++.|++.
T Consensus 50 ~~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 120 (223)
T 2f8y_A 50 DANIQDNMGRTPLHAAVSADAQGVFQ--------ILIRNRATDLDA-RMHDGTTPLILAARLAVEGMLEDLINSHADVNA 120 (223)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHH--------HHHHBTTSCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCccc-CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC
Confidence 34455778899999999999999999 7778775 4444 5678999999999999999999999999872
Q ss_pred ----CCccccccCCChhHHH-HHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHH
Q psy1036 155 ----AFTNLLYDSDTPSYIE-RSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVC 229 (399)
Q Consensus 155 ----~~~~l~~a~~~~~~~~-~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A 229 (399)
+.+++++++..+.... .+++..++++|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+|||++|
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A 198 (223)
T 2f8y_A 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAAREGSYETAKVLLDHF-ANRDITDHMDRLPRDIA 198 (223)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcC-CCCccccccCCCHHHHH
Confidence 2334444433222211 333334455555554 3555555555555555555555555 55555555555555555
Q ss_pred HhCCCHHHHHHHHhcc
Q psy1036 230 FKMPSVDSMGPLSTKL 245 (399)
Q Consensus 230 ~~~g~~~iv~~Ll~~~ 245 (399)
+.+++.+++++|++..
T Consensus 199 ~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 199 QERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHhcchHHHHHHHHcC
Confidence 5555555555555543
No 73
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=1.2e-24 Score=204.59 Aligned_cols=124 Identities=16% Similarity=0.051 Sum_probs=112.0
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCC
Q psy1036 85 QELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSD 164 (399)
Q Consensus 85 ~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~ 164 (399)
+|.||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+.+++++|+++|++
T Consensus 61 ~g~t~L~~A~~~g~~~~v~--------~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----------- 120 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVK--------ILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKNWR----------- 120 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-----------
T ss_pred CCCCHHHHHHHcCCHHHHH--------HHHHCCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-----------
Confidence 5899999999999999999 88899999888 577899999999999999999999999887
Q ss_pred ChhHHHHHHhhhccCCCCCCCCCC-chHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCcHHHHHHhCCCHHHHHHHH
Q psy1036 165 TPSYIERSDILLDLYVNTPDKALN-ETPLHFAAKFGSVECVKRLIGCAKIQTSVRNK-EGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 165 ~~~~~~~~~~~~~~~vn~~d~~~G-~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
++.+|. .| .||||+|+..|+.+++++|+++| ++. .+. .|+||||+|+..|+.+++++|+
T Consensus 121 ---------------~~~~~~-~g~~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 121 ---------------LMFYGK-TGWKTSFYHAVMLNDVSIVSYFLSEI-PST--FDLAILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp ---------------GGGCSS-SGGGSHHHHHHHTTCHHHHHHHHTTS-CTT--CCCSTHHHHHHHHHHTTCHHHHHHHH
T ss_pred ---------------CCccCC-CCCCCHHHHHHHcCCHHHHHHHHhCC-Ccc--ccccCCccHHHHHHHcChHHHHHHHH
Confidence 788888 58 79999999999999999999999 555 333 8999999999999999999999
Q ss_pred hccCc
Q psy1036 243 TKLTP 247 (399)
Q Consensus 243 ~~~~~ 247 (399)
+.+..
T Consensus 182 ~~gad 186 (285)
T 3kea_A 182 DYMTS 186 (285)
T ss_dssp HHHHH
T ss_pred HcCCC
Confidence 87643
No 74
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=202.05 Aligned_cols=121 Identities=20% Similarity=0.236 Sum_probs=78.4
Q ss_pred HHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccC-CCCCccccccCCCh
Q psy1036 88 VKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIG-NPAFTNLLYDSDTP 166 (399)
Q Consensus 88 T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga-~~~~~~l~~a~~~~ 166 (399)
+++|.|+..|+++.++.++.....+++ +. .|..|+||||+||..|+.+++++|++.|+ +
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~------n~-~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~------------- 137 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVV------NI-ADSNGNTALHYSVSHANFPVVQQLLDSGVCK------------- 137 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHH------TC-CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC-------------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcC------cC-CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-------------
Confidence 467888999999999966544333332 22 36689999999999999999999999998 4
Q ss_pred hHHHHHHhhhccCCCCCCCCCCchHHHHHH-----HcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 167 SYIERSDILLDLYVNTPDKALNETPLHFAA-----KFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 167 ~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa-----~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
+|..|. .|+||||+|+ ..++.+++++|++.| ++.+..|..|+||||+|+..|+.+++++|
T Consensus 138 -------------~~~~~~-~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 202 (276)
T 4hbd_A 138 -------------VDKQNR-AGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKAL 202 (276)
T ss_dssp -------------TTCCCT-TSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCCCCC-CCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 444444 3555555555 334555555555555 44455555555555555555555555555
Q ss_pred Hh
Q psy1036 242 ST 243 (399)
Q Consensus 242 l~ 243 (399)
++
T Consensus 203 l~ 204 (276)
T 4hbd_A 203 LA 204 (276)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 75
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=3.3e-24 Score=175.37 Aligned_cols=112 Identities=25% Similarity=0.295 Sum_probs=101.9
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
...+.|+||+|+..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~--------~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 65 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVK--------DYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKGAD--------- 65 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHH--------HHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTTCC---------
T ss_pred ccccchHHHHHHHcCCHHHHH--------HHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 356779999999999999999 78888888877 477899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHh
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFK 231 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~ 231 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 66 -----------------~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 66 -----------------INAPDK-HHITPLLSAVYEGHVSCVKLLLSKG-ADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp -----------------TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCC
T ss_pred -----------------CCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHhCC
Confidence 789998 6999999999999999999999999 9999999999999999944
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=4.3e-24 Score=186.24 Aligned_cols=135 Identities=17% Similarity=0.197 Sum_probs=123.7
Q ss_pred CCCCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCC
Q psy1036 76 PSPFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPA 155 (399)
Q Consensus 76 ~~~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~ 155 (399)
.......+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-- 97 (179)
T 3f6q_A 29 ENDLNQGDDHGFSPLHWACREGRSAVVE--------MLIMRGARINV-MNRGDDTPLHLAASHGHRDIVQKLLQYKAD-- 97 (179)
T ss_dssp TSCTTCCCTTSCCHHHHHHHTTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred cccccccCCCCCCHHHHHHHcCcHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--
Confidence 3344555778899999999999999999 88899988887 477899999999999999999999999987
Q ss_pred CccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCH
Q psy1036 156 FTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSV 235 (399)
Q Consensus 156 ~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~ 235 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+|||++|+..++.
T Consensus 98 ------------------------~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 98 ------------------------INAVNE-HGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp ------------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHHHHH
T ss_pred ------------------------CCccCC-CCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHHHHH
Confidence 789998 6999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHhccCc
Q psy1036 236 DSMGPLSTKLTP 247 (399)
Q Consensus 236 ~iv~~Ll~~~~~ 247 (399)
+++++|++....
T Consensus 152 ~~~~~L~~~g~~ 163 (179)
T 3f6q_A 152 LLRERAEKMGQN 163 (179)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhhcC
Confidence 999999998743
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=2.3e-23 Score=177.10 Aligned_cols=114 Identities=17% Similarity=0.102 Sum_probs=99.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcc-CC------CCCccccccCCChhHH-HHHHhhhccCCCCCCCCCCchHHHHHHHcC
Q psy1036 128 RYNALHVSTKAVNPAMTEMLLEII-GN------PAFTNLLYDSDTPSYI-ERSDILLDLYVNTPDKALNETPLHFAAKFG 199 (399)
Q Consensus 128 g~T~LH~Aa~~g~~~iv~~Ll~~g-a~------~~~~~l~~a~~~~~~~-~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g 199 (399)
|.|+||+|+..|+.+++++|++.. .+ .+.+++++ +..+... ..+++..++++|.+|. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 468999999999999999999883 12 45678888 5444332 2666677899999998 6999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 200 SVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 200 ~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++.
T Consensus 80 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 80 FLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp CHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 999999999999 99999999999999999999999999999988
No 78
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=9e-25 Score=182.08 Aligned_cols=125 Identities=26% Similarity=0.302 Sum_probs=113.1
Q ss_pred CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccc
Q psy1036 82 LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~ 161 (399)
.+..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------- 68 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVE--------YLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHKAL-------- 68 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHH--------HHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--------
T ss_pred cCCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCc--------
Confidence 3678899999999999999999 88899988887 477899999999999999999999999887
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..+..+++++|
T Consensus 69 ------------------~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 69 ------------------VNTTGY-QNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp ------------------TTCCCG-GGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred ------------------ccCcCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 788998 6999999999999999999999999 99999999999999999988777777655
Q ss_pred Hh
Q psy1036 242 ST 243 (399)
Q Consensus 242 l~ 243 (399)
.+
T Consensus 129 ~~ 130 (137)
T 3c5r_A 129 EK 130 (137)
T ss_dssp --
T ss_pred cc
Confidence 54
No 79
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=5.5e-24 Score=196.40 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=119.7
Q ss_pred CCCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCC-------------CCCCcHHHHHHHcCCHHHH
Q psy1036 78 PFKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHE-------------GCRYNALHVSTKAVNPAMT 144 (399)
Q Consensus 78 ~~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d-------------~~g~T~LH~Aa~~g~~~iv 144 (399)
++...+..|.||||+||..|+.++|+ +|++.|++++.... ..|+||||+|+..|+.+++
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~--------~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 156 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVE--------LLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHH--------HHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHH
T ss_pred cccccccCCCCHHHHHHHcCCHHHHH--------HHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHH
Confidence 44555668999999999999999999 88899988887432 5799999999999999999
Q ss_pred HHHHh---ccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCC---------HHHHHHHHhCCC
Q psy1036 145 EMLLE---IIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGS---------VECVKRLIGCAK 212 (399)
Q Consensus 145 ~~Ll~---~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~---------~~iv~~LL~~g~ 212 (399)
++|++ .|++ +|.+|. .|+||||+|+..|+ .+++++|+++|
T Consensus 157 ~~Ll~~~~~ga~--------------------------~~~~d~-~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g- 208 (260)
T 3jxi_A 157 HYLTENGHKQAD--------------------------LRRQDS-RGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC- 208 (260)
T ss_dssp HHHHHCSSCCCC--------------------------TTCCCT-TSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHhccccCCC--------------------------CcccCC-CCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-
Confidence 99999 7776 899998 69999999999888 79999999999
Q ss_pred CCc-------ccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 213 IQT-------SVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 213 a~~-------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
+++ +.+|..|+||||+|+..|+.+++++|++++
T Consensus 209 a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 209 AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 888 789999999999999999999999999987
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.7e-23 Score=190.55 Aligned_cols=130 Identities=23% Similarity=0.267 Sum_probs=119.9
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
......+.|+||+||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.+++++|++.|++
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------ 79 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQ--------QAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLITAGAN------ 79 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHH--------HHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------
T ss_pred cccccchhHHHHHHHHcCCHHHHH--------HHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------
Confidence 345678899999999999999999 88888988887 577899999999999999999999999987
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCcHHHHH--HhCCCHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRN-KEGKTPLDVC--FKMPSVD 236 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d-~~G~TpL~~A--~~~g~~~ 236 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.++ ..|+||||+| +..|+.+
T Consensus 80 --------------------~n~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 80 --------------------VNSPDS-HGWTPLHCAASCNDTVICMALVQHG-AAIFATTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp --------------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTTSTTHHH
T ss_pred --------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHHhcChHH
Confidence 889998 6999999999999999999999999 9999987 6999999999 9999999
Q ss_pred HHHHHHhccC
Q psy1036 237 SMGPLSTKLT 246 (399)
Q Consensus 237 iv~~Ll~~~~ 246 (399)
++++|++.+.
T Consensus 138 ~v~~Ll~~ga 147 (229)
T 2vge_A 138 CATYLADVEQ 147 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHcCC
Confidence 9999998763
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=7.7e-24 Score=186.67 Aligned_cols=125 Identities=10% Similarity=0.066 Sum_probs=111.3
Q ss_pred ccchHHHHHHHHcCCH----HHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCC------HHHHHHHHhccCC
Q psy1036 84 SQELVKLRKLIEKGNL----ADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVN------PAMTEMLLEIIGN 153 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~----~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~------~~iv~~Ll~~ga~ 153 (399)
..|+||||+|+..|+. ++|+ +|++.|++++. ++..|+||||+|+..|+ .+++++|+++|++
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~--------~Ll~~Gadvn~-~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad 106 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISM--------FLINKGADIKS-RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD 106 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHH--------HHHHTTCCSSC-CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHHHHcCCcchHHHHHH--------HHHHCCCCCCC-CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC
Confidence 5588999999999985 4788 88899999988 46789999999999887 6789999999987
Q ss_pred CCCccccccCCChhHHHHHHhhhccCCCCCCCCCCc-hHHHHHHHcC-----CHHHHHHHHh-CCCCCcccCCCCCCcHH
Q psy1036 154 PAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNE-TPLHFAAKFG-----SVECVKRLIG-CAKIQTSVRNKEGKTPL 226 (399)
Q Consensus 154 ~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~-TpLh~Aa~~g-----~~~iv~~LL~-~g~a~~~~~d~~G~TpL 226 (399)
+|.+|. .|+ ||||+|+..+ +.+++++|++ +| ++++.+|..|+|||
T Consensus 107 --------------------------in~~d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~~~d~~G~TpL 158 (186)
T 3t8k_A 107 --------------------------ITALYK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLLIKDKWGLTAL 158 (186)
T ss_dssp --------------------------SSSCBG-GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTTCCCTTSCCHH
T ss_pred --------------------------CCccCC-CcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCcccCCCCCCHH
Confidence 899998 699 9999999954 4679999999 89 99999999999999
Q ss_pred HHHHhCCCHHHHHHHHhcc
Q psy1036 227 DVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 227 ~~A~~~g~~~iv~~Ll~~~ 245 (399)
|+|++.|+.+++++|++..
T Consensus 159 ~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 159 EFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHH
Confidence 9999999999999998764
No 82
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=4.5e-23 Score=180.72 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=104.8
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+..|.||||+||..|+.++|+ +|++ |.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~--------~Ll~-~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--------- 101 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALS--------QLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGAD--------- 101 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH--------HHTT-TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred CCCCCCHHHHHHHcCCHHHHH--------HHHh-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 457899999999999999999 7777 877777 577899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCC-CCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPD-KALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSV 235 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d-~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~ 235 (399)
+|.+| . .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++.
T Consensus 102 -----------------~~~~~~~-~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 102 -----------------LDHRDMR-GGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp -----------------TTCCCSS-SSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHHHT
T ss_pred -----------------CCcCCCC-CCCCHHHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhccC
Confidence 78888 6 6999999999999999999999999 99999999999999999875433
No 83
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.2e-23 Score=189.93 Aligned_cols=127 Identities=21% Similarity=0.163 Sum_probs=111.3
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhc-cCCCCCcccccc
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEI-IGNPAFTNLLYD 162 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~-ga~~~~~~l~~a 162 (399)
..|.||||+||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.++|++|++. |++
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~--------- 132 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLR--------ECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIE--------- 132 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC---------
T ss_pred cccccccccccccCcHHHHH--------HHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC---------
Confidence 35678999999999999999 88888988887 477899999999999999999999998 776
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..++.++++.|+
T Consensus 133 -----------------~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 133 -----------------LNQQNK-LGDTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp -----------------CCCCCT-TSCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred -----------------ccccCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 889998 6999999999999999999999999 999999999999999999999999999998
Q ss_pred hccCc
Q psy1036 243 TKLTP 247 (399)
Q Consensus 243 ~~~~~ 247 (399)
.....
T Consensus 194 ~~~~~ 198 (222)
T 3ehr_A 194 GTDAV 198 (222)
T ss_dssp -----
T ss_pred ccchh
Confidence 77643
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=5.4e-23 Score=188.06 Aligned_cols=127 Identities=22% Similarity=0.194 Sum_probs=116.2
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+..+.||||.||..|+.++|+ +|++.|++++. .+..|+||||+||..|+.+++++|+++|++
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~--------~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--------- 95 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQ--------RIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLVQFGVN--------- 95 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHH--------HHTSTTSSCCC-CCTTSCCHHHHHHHHTCHHHHHHHHHHTCC---------
T ss_pred CchhhHHHHHHHHcCCHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 356789999999999999999 88899988887 477899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC-cHHHHH--HhCCCHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGK-TPLDVC--FKMPSVDSMG 239 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~-TpL~~A--~~~g~~~iv~ 239 (399)
+|.+|. .|+||||+|+..|+.++|++|+++| ++++.+|..|. ||||+| +..|+.++++
T Consensus 96 -----------------~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 96 -----------------VNAADS-DGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp -----------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred -----------------CCccCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 899998 6999999999999999999999999 99999998887 999999 8889999999
Q ss_pred HHHhccC
Q psy1036 240 PLSTKLT 246 (399)
Q Consensus 240 ~Ll~~~~ 246 (399)
+|++...
T Consensus 157 ~Ll~~~a 163 (239)
T 1ycs_B 157 FLYGVQE 163 (239)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 9998763
No 85
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=1.9e-22 Score=174.15 Aligned_cols=146 Identities=18% Similarity=0.129 Sum_probs=126.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHH
Q psy1036 126 GCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVK 205 (399)
Q Consensus 126 ~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~ 205 (399)
..+.++||+||..|+.+++++|++.|++ +|.+|. .|+||||+|+..|+.++++
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~v~ 64 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGAD--------------------------VNAEDA-SGWTPLHLAAFNGHLEIVE 64 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCC--------------------------TTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCC--------------------------CCCCCC-CCCCHHHHHHHcCCHHHHH
Confidence 3567899999999999999999999987 788888 6999999999999999999
Q ss_pred HHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccccc
Q psy1036 206 RLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFKSF 285 (399)
Q Consensus 206 ~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~~~ 285 (399)
+|+++| ++++.+|..|+||||+|+..|+.+++++|++......
T Consensus 65 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------------------------------ 107 (169)
T 2y1l_E 65 VLLKNG-ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN------------------------------------ 107 (169)
T ss_dssp HHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------------------------------
T ss_pred HHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------------------------------
Confidence 999999 9999999999999999999999999999987531100
Q ss_pred cChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHHHH
Q psy1036 286 RNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVRKL 365 (399)
Q Consensus 286 ~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~~l 365 (399)
..+..+.|+||.|++.|+.++|+.|
T Consensus 108 -------------------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 108 -------------------------------------------------------ANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp -------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------------------------------------------------CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 0012345789999999999999999
Q ss_pred hhcCCCeeecCCCchhHHHHhhccc
Q psy1036 366 VWDNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 366 v~~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
+..++++++.+.+|.|+||.|++..
T Consensus 133 l~~g~~~~~~~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 133 LKNGADVNAQDKFGKTAFDISIDNG 157 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 9999999998889999999998754
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1e-22 Score=187.02 Aligned_cols=111 Identities=18% Similarity=0.151 Sum_probs=102.7
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+..|.||||+||..|+.++|+ +|++ |.+++. .+..|+||||+||..|+.++|++|+++|++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~--------~Ll~-~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--------- 102 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALS--------QLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGAD--------- 102 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHH--------HTTT-TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred ccCCCCHHHHHHHcCCHHHHH--------HHHc-CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---------
Confidence 357899999999999999999 7778 888887 477899999999999999999999999988
Q ss_pred CCChhHHHHHHhhhccCCCCCC-CCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHh
Q psy1036 163 SDTPSYIERSDILLDLYVNTPD-KALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFK 231 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d-~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~ 231 (399)
+|.+| . .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+.
T Consensus 103 -----------------~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 103 -----------------LDHRDMR-GGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELARE 153 (244)
T ss_dssp -----------------TTCCCSS-SCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred -----------------CCcCCCC-CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHH
Confidence 78888 5 6999999999999999999999999 9999999999999999984
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=2e-22 Score=167.75 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=89.4
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHH
Q psy1036 118 DFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAK 197 (399)
Q Consensus 118 ~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~ 197 (399)
.+++. .+..|+||||+|+..|+.+++++|++.|++ +|.+|. .|+||||+|+.
T Consensus 3 ~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------------------------~~~~~~-~g~t~L~~A~~ 54 (136)
T 1d9s_A 3 PGIHM-LGGSSDAGLATAAARGQVETVRQLLEAGAD--------------------------PNALNR-FGRRPIQVMMM 54 (136)
T ss_dssp CCCSC-CCCCCSCHHHHHHHTTCHHHHHHHHHTTCC--------------------------TTCCCT-TCCTTTTTSTT
T ss_pred CCccC-CCCCCccHHHHHHHcCCHHHHHHHHHcCCC--------------------------cCCcCC-CCCCHHHHHHc
Confidence 34444 466899999999999999999999999887 788998 69999999999
Q ss_pred cCCHHHHHHHHhCCCCCcccCCCC-CCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 198 FGSVECVKRLIGCAKIQTSVRNKE-GKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 198 ~g~~~iv~~LL~~g~a~~~~~d~~-G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
|+.+++++|+++| ++++.+|.. |+||||+|+..|+.+++++|++.
T Consensus 55 -~~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 100 (136)
T 1d9s_A 55 -GSAQVAELLLLHG-AEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100 (136)
T ss_dssp -SCHHHHHHHHHHT-CCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred -CCHHHHHHHHHCC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999 999999999 99999999999999999999875
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=6.4e-22 Score=187.57 Aligned_cols=131 Identities=20% Similarity=0.241 Sum_probs=117.0
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCccc-----CCCCCCcHHHHHHHc---CCHHHHHHHHhc
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTIL-----HEGCRYNALHVSTKA---VNPAMTEMLLEI 150 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~-----~d~~g~T~LH~Aa~~---g~~~iv~~Ll~~ 150 (399)
|..+...+.++||.|+..|+++.|+ .|+..|.+++.. .+..|+||||+|+.. |+.+++++|++.
T Consensus 144 f~~~~~~~~~~L~~A~~~g~~~~v~--------~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ 215 (301)
T 2b0o_E 144 FARRCTPEPQRLWTAICNRDLLSVL--------EAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215 (301)
T ss_dssp TSCCCC-CHHHHHHHHHTTCHHHHH--------HHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred hhcccCchHHHHhhhhhccCHHHHH--------HHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc
Confidence 3444455668999999999999999 677788777652 466899999999997 899999999999
Q ss_pred cCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHH
Q psy1036 151 IGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCF 230 (399)
Q Consensus 151 ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~ 230 (399)
|++ +|.+|. .|+||||+|+..|+.++|++||++| ++++.+|..|+||||+|+
T Consensus 216 gad--------------------------vn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~ 267 (301)
T 2b0o_E 216 GGH--------------------------LDAKAA-DGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIAR 267 (301)
T ss_dssp SSC--------------------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHH
T ss_pred CCC--------------------------CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 987 899998 6999999999999999999999999 999999999999999999
Q ss_pred hCCCHHHHHHHHhcc
Q psy1036 231 KMPSVDSMGPLSTKL 245 (399)
Q Consensus 231 ~~g~~~iv~~Ll~~~ 245 (399)
..|+.+++++|++..
T Consensus 268 ~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 268 KKHHKECEELLEQAQ 282 (301)
T ss_dssp HHTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHhc
Confidence 999999999999865
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=2.3e-22 Score=171.42 Aligned_cols=142 Identities=14% Similarity=0.032 Sum_probs=109.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHH
Q psy1036 125 EGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECV 204 (399)
Q Consensus 125 d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv 204 (399)
+..|.||||+|+..|+.+++++|+++|++ +|.+|. .|+||||+|+ .|+.+++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------~~~~~~-~g~t~L~~A~-~~~~~~v 60 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN--------------------------PNAPNS-YGRRPIQVMM-MGSARVA 60 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC--------------------------TTCCCS-SSCCTTTSSC-TTCHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC--------------------------CCCCCC-CCCCHHHHHH-cCCHHHH
Confidence 45689999999999999999999999887 788998 6999999986 9999999
Q ss_pred HHHHhCCCCCcccCCCCCCc-HHHHHHhCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhccccc
Q psy1036 205 KRLIGCAKIQTSVRNKEGKT-PLDVCFKMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKKIRFK 283 (399)
Q Consensus 205 ~~LL~~g~a~~~~~d~~G~T-pL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~r~~ 283 (399)
++|+++| ++++.+|..|+| |||+|+..|+.+++++|++.....
T Consensus 61 ~~Ll~~g-~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~----------------------------------- 104 (156)
T 1bi7_B 61 ELLLLHG-AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL----------------------------------- 104 (156)
T ss_dssp HHHHTTT-CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-----------------------------------
T ss_pred HHHHHcC-CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-----------------------------------
Confidence 9999999 999999999999 999999999999999998753100
Q ss_pred cccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCHHHHH
Q psy1036 284 SFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNLADVR 363 (399)
Q Consensus 284 ~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~~~v~ 363 (399)
...+..+.||||+|++.|+.++|+
T Consensus 105 --------------------------------------------------------~~~d~~g~tpl~~A~~~~~~~~v~ 128 (156)
T 1bi7_B 105 --------------------------------------------------------DVRDAWGRLPVDLAEELGHRDVAR 128 (156)
T ss_dssp --------------------------------------------------------SCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred --------------------------------------------------------cccCCCCCCHHHHHHHhCHHHHHH
Confidence 001123468899999999999999
Q ss_pred HHhhcCCCeeecCCCchhHHHHh
Q psy1036 364 KLVWDNPRYLVSSGDFPTILHVV 386 (399)
Q Consensus 364 ~lv~~~~~~~~~s~d~~~~l~~~ 386 (399)
.|+..|++++..+..+.|..+-+
T Consensus 129 ~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 129 YLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHSSCC-----------------
T ss_pred HHHHcCCCCCccCcCcCcccccC
Confidence 99999999999988888877643
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=2.2e-22 Score=192.85 Aligned_cols=159 Identities=19% Similarity=0.146 Sum_probs=101.1
Q ss_pred CCCCC-CCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCC---HHHHHHHHhcc-
Q psy1036 77 SPFKS-LKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVN---PAMTEMLLEII- 151 (399)
Q Consensus 77 ~~~~~-~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~---~~iv~~Ll~~g- 151 (399)
..+.. .+..|+||||+||..|+.++|+ +|++.|++++. .+..|+||||+|+..|+ .++++.|++.+
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~--------~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~ 191 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVK--------HLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 191 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHH--------HHHHTTCCTTB-CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHhcccccHHHHHHHHHhhh
Confidence 34444 5788999999999999999999 88899999987 57789999999999998 67777777766
Q ss_pred CC------CCCccccccCC----Ch--hHHH-HHHhhh------------------ccCCCCCCCCCCchHHHHHHHcCC
Q psy1036 152 GN------PAFTNLLYDSD----TP--SYIE-RSDILL------------------DLYVNTPDKALNETPLHFAAKFGS 200 (399)
Q Consensus 152 a~------~~~~~l~~a~~----~~--~~~~-~~~~~~------------------~~~vn~~d~~~G~TpLh~Aa~~g~ 200 (399)
++ .+.+++|+++. .+ .... ++.... ++++|.+|. .|+||||+|+.
T Consensus 192 ~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~-~g~t~L~~a~~--- 267 (327)
T 1sw6_A 192 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG-ERKDSILENLD--- 267 (327)
T ss_dssp GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS---
T ss_pred ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc-cCCChhHHHHH---
Confidence 32 34445554432 11 1111 111110 334444444 34444444442
Q ss_pred HHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhcccC
Q psy1036 201 VECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVATKS 254 (399)
Q Consensus 201 ~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 254 (399)
+++|+++ +++.+|..|+||||+|+.+|+.+++++|++.+.......+.
T Consensus 268 ---~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 315 (327)
T 1sw6_A 268 ---LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKS 315 (327)
T ss_dssp ---HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTT
T ss_pred ---HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 4444443 46788888888888888888888888888887554444333
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=1.4e-21 Score=183.02 Aligned_cols=127 Identities=20% Similarity=0.301 Sum_probs=113.3
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCccc-----CCCCCCcHHHHHHHc---CCHHHHHHHHhccCCCC
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTIL-----HEGCRYNALHVSTKA---VNPAMTEMLLEIIGNPA 155 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~-----~d~~g~T~LH~Aa~~---g~~~iv~~Ll~~ga~~~ 155 (399)
....++|+.|+..|+.+.++ .++..|.+.+.. .+..|+||||+||.. |+.+++++|+++|++
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~--------~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-- 197 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLL--------QAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-- 197 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHH--------HHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC--
T ss_pred chhhhhhhhHhhhcccHHHH--------HHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC--
Confidence 44567999999999999999 555666553321 256799999999999 899999999999998
Q ss_pred CccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCH
Q psy1036 156 FTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSV 235 (399)
Q Consensus 156 ~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~ 235 (399)
+|.+|. .|+||||+|+..|+.++|++||++| ++++.+|..|+||||+|+..|+.
T Consensus 198 ------------------------in~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 198 ------------------------LDKQTG-KGSTALHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHE 251 (278)
T ss_dssp ------------------------TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ------------------------ccccCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCH
Confidence 899998 6999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHhccC
Q psy1036 236 DSMGPLSTKLT 246 (399)
Q Consensus 236 ~iv~~Ll~~~~ 246 (399)
+++++|++.+.
T Consensus 252 ~~v~~Ll~~ga 262 (278)
T 1dcq_A 252 HCEELLTQALS 262 (278)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHcCC
Confidence 99999998764
No 92
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.2e-21 Score=150.55 Aligned_cols=91 Identities=29% Similarity=0.427 Sum_probs=86.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHH
Q psy1036 127 CRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKR 206 (399)
Q Consensus 127 ~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~ 206 (399)
+|+||||+||..|+.+++++|++.|++ +|.+|. .|+||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------------------------~n~~d~-~g~t~L~~A~~~~~~~~v~~ 53 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD--------------------------VNAKDK-NGRTPLHLAARNGHLEVVKL 53 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC--------------------------TTCCCT-TSCCHHHHHHHTTCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC--------------------------CcccCC-CCCCHHHHHHHcCCHHHHHH
Confidence 379999999999999999999999987 889998 69999999999999999999
Q ss_pred HHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhcc
Q psy1036 207 LIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKL 245 (399)
Q Consensus 207 LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~ 245 (399)
|+++| ++++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 54 Ll~~g-a~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 54 LLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999 999999999999999999999999999999875
No 93
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=2.6e-21 Score=195.87 Aligned_cols=133 Identities=20% Similarity=0.234 Sum_probs=117.6
Q ss_pred CCCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCccc-----CCCCCCcHHHHHHH---cCCHHHHHHHHhc
Q psy1036 79 FKSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTIL-----HEGCRYNALHVSTK---AVNPAMTEMLLEI 150 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~-----~d~~g~T~LH~Aa~---~g~~~iv~~Ll~~ 150 (399)
|..+...+.+.||.|+..|+++.|+ .|++.|++++.. .+..|+||||+||. .|+.++|++||++
T Consensus 125 f~~~~~~~~~~L~~A~~~g~~~~v~--------~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ 196 (497)
T 3lvq_E 125 FARRCTPEPQRLWTAICNRDLLSVL--------EAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 196 (497)
T ss_dssp TSCCCC-CHHHHHHHHHHTCHHHHH--------HHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred ccccccccHHHHHHHHhccCHHHHH--------HHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc
Confidence 4444444457899999999999999 777888777652 26689999999976 8999999999999
Q ss_pred cCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHH
Q psy1036 151 IGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCF 230 (399)
Q Consensus 151 ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~ 230 (399)
|++ +|.+|. .|+||||+||..|+.++|++||++| ++++.+|..|+||||+|+
T Consensus 197 ga~--------------------------vn~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 248 (497)
T 3lvq_E 197 GGH--------------------------LDAKAA-DGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIAR 248 (497)
T ss_dssp SCC--------------------------TTCCCS-SSCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHH
T ss_pred CCC--------------------------CCccCC-CCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 998 899998 6999999999999999999999999 999999999999999999
Q ss_pred hCCCHHHHHHHHhccCc
Q psy1036 231 KMPSVDSMGPLSTKLTP 247 (399)
Q Consensus 231 ~~g~~~iv~~Ll~~~~~ 247 (399)
..|+.+++++|++.+..
T Consensus 249 ~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 249 KKHHKECEELLEQAQAG 265 (497)
T ss_dssp HTTCHHHHHHHHHTCC-
T ss_pred HcCCHHHHHHHHHhCCC
Confidence 99999999999998743
No 94
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=4.3e-21 Score=186.55 Aligned_cols=125 Identities=20% Similarity=0.206 Sum_probs=115.9
Q ss_pred cchHHHHHHHHc-CCHHHHHHHHhhCChhhhhCCCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 85 QELVKLRKLIEK-GNLADVRKLVWDNPRYLVSSGDFPTILH-EGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 85 ~~~T~Lh~Aa~~-G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~-d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
.+.|+||+|+.. |++++|+ +|++.|++++... +..|+||||+||..|+.++|++|+++|++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~--------~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad--------- 260 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMA--------DALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN--------- 260 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHH--------HHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CCCcHHHHHHHccCCHHHHH--------HHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC---------
Confidence 456899999999 9999999 8889998888742 26899999999999999999999999987
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLS 242 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 242 (399)
+|.+|. .|+||||+|+..|+.++|++||++| ++++.+|..|+||||+|+..|+.+++++|+
T Consensus 261 -----------------vn~~d~-~G~TpLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 261 -----------------VNQADS-AGRGPLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp -----------------TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------------CCCCCC-CCCCHHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 899998 6999999999999999999999999 999999999999999999999999999999
Q ss_pred hcc
Q psy1036 243 TKL 245 (399)
Q Consensus 243 ~~~ 245 (399)
...
T Consensus 322 ~~~ 324 (368)
T 3jue_A 322 LAK 324 (368)
T ss_dssp HHH
T ss_pred HcC
Confidence 765
No 95
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.7e-22 Score=182.55 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=93.3
Q ss_pred hhhhCCCCCcc--cCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCc
Q psy1036 112 YLVSSGDFPTI--LHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNE 189 (399)
Q Consensus 112 ~Ll~~g~~~~~--~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~ 189 (399)
.|++.|++++. ..+..|.||||+||..|+.+++++|++.|++ +|.+|. .|+
T Consensus 3 ~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------~~~~d~-~g~ 55 (229)
T 2vge_A 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND--------------------------PSQPNE-EGI 55 (229)
T ss_dssp -------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC--------------------------TTCCCT-TSC
T ss_pred ehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC--------------------------CCCCCC-CCC
Confidence 56677766554 2344577899999999999999999999987 788998 699
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhh
Q psy1036 190 TPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKV 250 (399)
Q Consensus 190 TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~ 250 (399)
||||+||..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|++.+.....
T Consensus 56 tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 56 TALHNAICGANYSIVDFLITAG-ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA 115 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 9999999999999999999999 99999999999999999999999999999998755443
No 96
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=9.5e-21 Score=154.16 Aligned_cols=90 Identities=29% Similarity=0.448 Sum_probs=85.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHH
Q psy1036 127 CRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKR 206 (399)
Q Consensus 127 ~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~ 206 (399)
+|+||||+|+..|+.+++++|++.|++ ++..|. .|+||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~~~~ 53 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD--------------------------VNAKDK-NGRTPLHLAARNGHLEVVKL 53 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC--------------------------TTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC--------------------------CCCcCC-CCCcHHHHHHHcCcHHHHHH
Confidence 489999999999999999999999887 788888 69999999999999999999
Q ss_pred HHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 207 LIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 207 LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
|+++| ++++.+|..|+||||+|+..|+.+++++|++.
T Consensus 54 Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (126)
T 1n0r_A 54 LLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (126)
T ss_dssp HHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHcC-CCCcccCCCCCcHHHHHHHcChHHHHHHHHHc
Confidence 99999 89999999999999999999999999999864
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=4.4e-22 Score=175.40 Aligned_cols=153 Identities=14% Similarity=-0.001 Sum_probs=120.5
Q ss_pred chHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCH----HHHHHHHhccCCCCCccccc
Q psy1036 86 ELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNP----AMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 86 ~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~----~iv~~Ll~~ga~~~~~~l~~ 161 (399)
+.++|+.||+.|+++.|+ .++..+.+ ...+..|+||||+|+..|+. +++++||+.|++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~--------~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-------- 67 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFL--------ELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-------- 67 (186)
T ss_dssp HCSSHHHHHHHSCHHHHH--------HHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC--------
T ss_pred cccHHHHHHHcCCHHHHH--------HHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC--------
Confidence 446899999999999999 44455532 21224699999999999975 599999999998
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCC------HHHHHHHHhCCCCCcccCCCCCC-cHHHHHHhCCC
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGS------VECVKRLIGCAKIQTSVRNKEGK-TPLDVCFKMPS 234 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~------~~iv~~LL~~g~a~~~~~d~~G~-TpL~~A~~~g~ 234 (399)
+|.+|. .|+||||+|+..|+ .++|++|+++| ++++.+|..|+ ||||+|+..+.
T Consensus 68 ------------------vn~~d~-~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~ 127 (186)
T 3t8k_A 68 ------------------IKSRTK-EGTTLFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFV 127 (186)
T ss_dssp ------------------SSCCCT-TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCS
T ss_pred ------------------CCCCCC-CCCcHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCC
Confidence 899998 79999999999997 68899999999 99999999999 99999999554
Q ss_pred -----HHHHHHHHh-ccCchhhcccCCCCccchhhhhchHHHHHHHHH
Q psy1036 235 -----VDSMGPLST-KLTPTKVATKSEGTEEGERVFDNKEEALLFIKK 276 (399)
Q Consensus 235 -----~~iv~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 276 (399)
.+++++|++ .+.......+.+.+...+.......+..+.+..
T Consensus 128 ~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 128 DENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp CHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 568999998 776655555554444444444455566666554
No 98
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=6.8e-21 Score=158.44 Aligned_cols=91 Identities=21% Similarity=0.215 Sum_probs=86.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHH
Q psy1036 126 GCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVK 205 (399)
Q Consensus 126 ~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~ 205 (399)
..|.||||+||..|+.+++++|++.|++ +|..|. .|+||||+|+..|+.++++
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~v~ 64 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD--------------------------VNAKDE-YGLTPLYLATAHGHLEIVE 64 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC--------------------------TTCCCT-TSCCHHHHHHHHTCHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC--------------------------CCCcCC-CCCCHHHHHHHcCCHHHHH
Confidence 3578999999999999999999999987 788998 6999999999999999999
Q ss_pred HHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 206 RLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 206 ~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
+|+++| ++++.+|..|+||||+|+..|+.+++++|++.
T Consensus 65 ~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 102 (136)
T 2jab_A 65 VLLKNG-ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH 102 (136)
T ss_dssp HHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 999999 99999999999999999999999999999864
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=1.7e-22 Score=197.19 Aligned_cols=128 Identities=13% Similarity=0.041 Sum_probs=87.5
Q ss_pred ccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcc--cCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccc
Q psy1036 84 SQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTI--LHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLY 161 (399)
Q Consensus 84 ~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~--~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~ 161 (399)
.++.||||+||..|+.++|+ +|++.|+.... ..+..|+||||+||..|+.++|++|+++|++...
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~--------~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~----- 156 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALD--------TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM----- 156 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHH--------HHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-----
T ss_pred CCcCCHHHHHHHcCCHHHHH--------HHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-----
Confidence 34569999999999999999 88888862211 1233578999999999999999999999974110
Q ss_pred cCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCccc--CCCCCCcHHHHHH-hCCCHHHH
Q psy1036 162 DSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSV--RNKEGKTPLDVCF-KMPSVDSM 238 (399)
Q Consensus 162 a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~--~d~~G~TpL~~A~-~~g~~~iv 238 (399)
.+..+. ++||||+||..|+.++|++|+++| ++++. .|..|+||||+|+ .+|+.+++
T Consensus 157 ------------------~~i~~~--~~TpLh~Aa~~G~~eiv~~Ll~~g-a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv 215 (376)
T 2aja_A 157 ------------------AMIQAE--NYHAFRLAAENGHLHVLNRLCELA-PTEATAMIQAENYYAFRWAAVGRGHHNVI 215 (376)
T ss_dssp ------------------HHHSHH--HHHHHHHHHHTTCHHHHHHHHHSC-GGGHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred ------------------cccCCC--CCCHHHHHHHCCCHHHHHHHHHcC-CccchhccCCCCCCHHHHHHHHCCCHHHH
Confidence 011122 266666666666666666666666 66555 6666666666666 66666666
Q ss_pred HHHHhcc
Q psy1036 239 GPLSTKL 245 (399)
Q Consensus 239 ~~Ll~~~ 245 (399)
++|++..
T Consensus 216 ~~Ll~~g 222 (376)
T 2aja_A 216 NFLLDCP 222 (376)
T ss_dssp HHHTTSH
T ss_pred HHHHhCC
Confidence 6666543
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1e-20 Score=157.40 Aligned_cols=103 Identities=20% Similarity=0.173 Sum_probs=94.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHH
Q psy1036 124 HEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVEC 203 (399)
Q Consensus 124 ~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~i 203 (399)
++..|+||||+|+..|+.+++++|++.|++ ++.+|. .|+||||+|+..|+.++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~ 58 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD--------------------------PNVKDH-AGWTPLHEACNHGHLKV 58 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--------------------------SCCCCT-TSCCHHHHHHHTTCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------------------CCcCCC-CCCCHHHHHHHcCCHHH
Confidence 577899999999999999999999999887 788998 69999999999999999
Q ss_pred HHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhcccC
Q psy1036 204 VKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVATKS 254 (399)
Q Consensus 204 v~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 254 (399)
+++|+++| ++++.+|..|+||||+|+..|+.+++++|++...........
T Consensus 59 ~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 108 (137)
T 3c5r_A 59 VELLLQHK-ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIF 108 (137)
T ss_dssp HHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHcC-CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 99999999 999999999999999999999999999999987554444333
No 101
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.2e-20 Score=146.29 Aligned_cols=93 Identities=28% Similarity=0.378 Sum_probs=85.3
Q ss_pred cchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCC
Q psy1036 85 QELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSD 164 (399)
Q Consensus 85 ~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~ 164 (399)
+|+||||+||..|+.++++ +|++.|.+++. ++..|+||||+|+..|+.+++++|++.|++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~--------~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----------- 60 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVK--------LLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGAD----------- 60 (93)
T ss_dssp --CCHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----------
T ss_pred CCCcHHHHHHHcCCHHHHH--------HHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 3679999999999999999 88899988887 577899999999999999999999999987
Q ss_pred ChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC
Q psy1036 165 TPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQ 214 (399)
Q Consensus 165 ~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~ 214 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++
T Consensus 61 ---------------~~~~d~-~g~t~l~~A~~~~~~~~~~~Ll~~g-a~ 93 (93)
T 1n0q_A 61 ---------------VNAKDK-NGRTPLHLAARNGHLEVVKLLLEAG-AY 93 (93)
T ss_dssp ---------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTT-CC
T ss_pred ---------------CCccCC-CCCCHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 789998 6999999999999999999999999 53
No 102
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=8e-21 Score=153.09 Aligned_cols=107 Identities=23% Similarity=0.244 Sum_probs=82.7
Q ss_pred CccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcccccc
Q psy1036 83 KSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYD 162 (399)
Q Consensus 83 ~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a 162 (399)
+..|.||||+||..|+.++++ +|++.|.+++. .+..|+||||+|+..|+.+++++|++.|++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~--------~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--------- 67 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVK--------KLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGAD--------- 67 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHH--------HHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTTCC---------
T ss_pred CCCCCCHHHHHHHcCCHHHHH--------HHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---------
Confidence 566778888888888888888 77777777666 456788888888888888888888887776
Q ss_pred CCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHH
Q psy1036 163 SDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPL 226 (399)
Q Consensus 163 ~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL 226 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++++.++..|.||-
T Consensus 68 -----------------~~~~d~-~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 -----------------VNARSK-DGNTPEHLAKKNGHHEIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp -----------------TTCCCT-TCCCTTHHHHTTTCHHHHHHHHTTS-SSHHHHSCCCC---
T ss_pred -----------------CcccCC-CCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCccccccc
Confidence 677777 5888888888888888888888888 78888888888774
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=2.7e-20 Score=167.72 Aligned_cols=92 Identities=27% Similarity=0.190 Sum_probs=86.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHH
Q psy1036 125 EGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECV 204 (399)
Q Consensus 125 d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv 204 (399)
+..|.||||+||..|+.+++++|++.|++ +|.+|. .|+||||+||..|+.++|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~v 122 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG--------------------------VNGLDK-AGSTALYWACHGGHKDIV 122 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC--------------------------TTCCCT-TSCCHHHHHHHTTCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC--------------------------ccccCC-CCCCHHHHHHHcCCHHHH
Confidence 33578999999999999999999999887 788998 699999999999999999
Q ss_pred HHHHhC-CCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 205 KRLIGC-AKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 205 ~~LL~~-g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
++|+++ | ++++.+|..|+||||+|+..|+.+++++|++.
T Consensus 123 ~~Ll~~~g-~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 162 (222)
T 3ehr_A 123 EMLFTQPN-IELNQQNKLGDTALHAAAWKGYADIVQLLLAK 162 (222)
T ss_dssp HHHTTSTT-CCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHcCCC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 999999 7 99999999999999999999999999999875
No 104
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.6e-19 Score=147.29 Aligned_cols=98 Identities=19% Similarity=0.129 Sum_probs=89.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHH
Q psy1036 126 GCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVK 205 (399)
Q Consensus 126 ~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~ 205 (399)
..|.||||+|+..|+.+++++|++.|++ +|..|. .|+||||+|+..|+.++++
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~--------------------------~~~~~~-~g~t~L~~A~~~~~~~~v~ 57 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED--------------------------VNRTLE-GGRKPLHYAADCGQLEILE 57 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC--------------------------TTSCCT-TSSCHHHHHHHTTCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC--------------------------cCccCC-CCCcHHHHHHHcCCHHHHH
Confidence 4578999999999999999999999887 788998 6999999999999999999
Q ss_pred HHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhc
Q psy1036 206 RLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVA 251 (399)
Q Consensus 206 ~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~ 251 (399)
+|+++| ++++.+|..|+||||+|+..|+.+++++|++........
T Consensus 58 ~Ll~~g-~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 102 (123)
T 3aaa_C 58 FLLLKG-ADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVK 102 (123)
T ss_dssp HHHTTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 999999 999999999999999999999999999999987554333
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=2.1e-19 Score=144.72 Aligned_cols=100 Identities=28% Similarity=0.288 Sum_probs=92.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHH
Q psy1036 124 HEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVEC 203 (399)
Q Consensus 124 ~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~i 203 (399)
+|..|+||||+||..|+.+++++|++.|++ +|.+|. .|+||||+|+..|+.++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--------------------------~~~~d~-~g~t~L~~A~~~~~~~~ 57 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD--------------------------VNARSK-DGNTPLHLAAKNGHAEI 57 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC--------------------------SSCCCS-SSCCTTHHHHTTTCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------------------CCCcCC-CCCCHHHHHHHcCcHHH
Confidence 467899999999999999999999999887 788998 69999999999999999
Q ss_pred HHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhc
Q psy1036 204 VKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVA 251 (399)
Q Consensus 204 v~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~ 251 (399)
+++|+++| ++++.+|..|+||||+|+..++.+++++|++.+......
T Consensus 58 ~~~Ll~~g-~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 58 VKLLLAKG-ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp HHHHTTTT-CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHH
T ss_pred HHHHHHcC-CCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcC
Confidence 99999999 999999999999999999999999999999988654443
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=1.6e-19 Score=171.07 Aligned_cols=111 Identities=22% Similarity=0.214 Sum_probs=95.2
Q ss_pred CCccchHHHHHHHHc---CCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCcc
Q psy1036 82 LKSQELVKLRKLIEK---GNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTN 158 (399)
Q Consensus 82 ~~~~~~T~Lh~Aa~~---G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~ 158 (399)
.+..|.||||+||.. |++++|+ +|++.|++++. .|..|+||||+|+..|+.+++++|++.|++
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~--------~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad----- 251 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVD--------FIIQNGGHLDA-KAADGNTALHYAALYNQPDCLKLLLKGRAL----- 251 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHH--------HHHHHSSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----
T ss_pred cCCCCccHHHHHHHhcccCcHHHHH--------HHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----
Confidence 367899999999997 8999999 88899998888 477899999999999999999999999998
Q ss_pred ccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCH
Q psy1036 159 LLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSV 235 (399)
Q Consensus 159 l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~ 235 (399)
++.+|. .|+||||+|+..|+.+++++|+++| ++ .|.||||+|+.+|+.
T Consensus 252 ---------------------~~~~d~-~G~TpL~~A~~~~~~~iv~~Ll~~g-a~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 252 ---------------------VGTVNE-AGETALDIARKKHHKECEELLEQAQ-AG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---------------------CSCCCT-TSCCHHHHHHHHTCHHHHHHHHHHH-HH------TTSSCCC--------
T ss_pred ---------------------CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHhc-CC------CCCChhHHHHhcCCc
Confidence 789998 6999999999999999999999999 65 589999999998864
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.77 E-value=1.3e-19 Score=176.68 Aligned_cols=119 Identities=12% Similarity=0.041 Sum_probs=93.8
Q ss_pred chHHHHHHHH-cCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCC
Q psy1036 86 ELVKLRKLIE-KGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSD 164 (399)
Q Consensus 86 ~~T~Lh~Aa~-~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~ 164 (399)
++++++.|+. .++.+.++ +++..|.+ ++||||+||..|+.++|++|++.|+...
T Consensus 65 ~ll~~~~a~~~~~~~~~~~--------~l~~~g~~--------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~--------- 119 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWS--------DAHKKGIK--------SEVICFVAAITGCSSALDTLCLLLTSDE--------- 119 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHH--------HHHHHTCC--------HHHHHHHHHHHCCHHHHHHHTTC--CCS---------
T ss_pred HHHHHHHHHhcCCCHHHHH--------HHHHcCCC--------cCCHHHHHHHcCCHHHHHHHHHcCCcHH---------
Confidence 4568888877 57888888 77777643 4699999999999999999999987411
Q ss_pred ChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC---cccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 165 TPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQ---TSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 165 ~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~---~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
..+..+. .|+||||+||..|+.++|++|+++| ++ .++.+.+ +||||+|+..|+.+++++|
T Consensus 120 --------------~~~~~~~-~~~tpL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 120 --------------IVKVIQA-ENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMIQAEN-YHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp --------------SCC--CH-HHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHH
T ss_pred --------------HHHHhcc-CCCCHHHHHHHcCCHHHHHHHHhCC-CCccccccCCCC-CCHHHHHHHCCCHHHHHHH
Confidence 0233445 5899999999999999999999999 65 3343333 9999999999999999999
Q ss_pred HhccC
Q psy1036 242 STKLT 246 (399)
Q Consensus 242 l~~~~ 246 (399)
++.+.
T Consensus 183 l~~ga 187 (376)
T 2aja_A 183 CELAP 187 (376)
T ss_dssp HHSCG
T ss_pred HHcCC
Confidence 98763
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=6.9e-19 Score=140.96 Aligned_cols=89 Identities=27% Similarity=0.305 Sum_probs=84.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHH
Q psy1036 125 EGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECV 204 (399)
Q Consensus 125 d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv 204 (399)
+..|+|+||+||..|+.+++++|++.|++ +|.+|. .|+||||+||..|+.+++
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------i~~~d~-~g~tpLh~A~~~~~~~~v 73 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGAD--------------------------VAAKDK-NGSTPLHLAARNGHLEVV 73 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCC--------------------------TTCCCT-TCCCHHHHHHHTTCHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCC--------------------------CCccCC-CCCCHHHHHHHcCCHHHH
Confidence 55789999999999999999999999887 788998 699999999999999999
Q ss_pred HHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q psy1036 205 KRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPL 241 (399)
Q Consensus 205 ~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~L 241 (399)
++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 74 ~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 74 KLLLEAG-ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHcC-CCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999 99999999999999999999999999876
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.77 E-value=6.6e-19 Score=161.49 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=87.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHH
Q psy1036 127 CRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKR 206 (399)
Q Consensus 127 ~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~ 206 (399)
.|+||||+||..|+.+++++|++ |++ +|.+|. .|+||||+||..|+.++|++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~--------------------------~~~~d~-~g~t~L~~A~~~g~~~~v~~ 95 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD--------------------------VDAVDE-NGRTALLFVAGLGSDKCVRL 95 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC--------------------------TTCBCT-TSCBHHHHHHHHTCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC--------------------------CCCcCC-CCCCHHHHHHHCCCHHHHHH
Confidence 58999999999999999999999 776 789998 69999999999999999999
Q ss_pred HHhCCCCCcccCC-CCCCcHHHHHHhCCCHHHHHHHHhccCch
Q psy1036 207 LIGCAKIQTSVRN-KEGKTPLDVCFKMPSVDSMGPLSTKLTPT 248 (399)
Q Consensus 207 LL~~g~a~~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~ 248 (399)
|+++| ++++.+| ..|+||||+|+..|+.+++++|++.+...
T Consensus 96 Ll~~g-a~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 96 LAEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHHTT-CCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcC-CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999 9999998 88999999999999999999999986543
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=5.6e-18 Score=171.40 Aligned_cols=137 Identities=16% Similarity=0.050 Sum_probs=107.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCC------CCCCCchHHHHHHH---cC
Q psy1036 129 YNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTP------DKALNETPLHFAAK---FG 199 (399)
Q Consensus 129 ~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~------d~~~G~TpLh~Aa~---~g 199 (399)
.+.||.|+..|+.++++.||+.|++ +|.+ |. .|+||||+||. .|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~--------------------------~n~~~~~~~~~~-~g~t~Lh~A~~~a~~g 185 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD--------------------------FGQPLPGPDAQA-PEELVLHLAVKVANQA 185 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--------------------------SSSCBCCSSSCC-SCBCHHHHHHHTCCTT
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc--------------------------ccCCCCCccccc-ccchHHHHHHHhcccc
Confidence 3689999999999999999999988 4544 66 69999999976 89
Q ss_pred CHHHHHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhccCchhhcccCCCCccchhhhhchHHHHHHHHHhhc
Q psy1036 200 SVECVKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTKLTPTKVATKSEGTEEGERVFDNKEEALLFIKKNKK 279 (399)
Q Consensus 200 ~~~iv~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~ 279 (399)
+.++|++||++| ++++.+|..|+||||+|+.+|+.+++++|++.+...
T Consensus 186 ~~~~v~~Ll~~g-a~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~------------------------------- 233 (497)
T 3lvq_E 186 SLPLVDFIIQNG-GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV------------------------------- 233 (497)
T ss_dssp THHHHHHHHHHS-CCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-------------------------------
T ss_pred cHHHHHHHHHcC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-------------------------------
Confidence 999999999999 999999999999999999999999999998753100
Q ss_pred cccccccChHHHHHHHhcCCccCCCCCCCCCCCCCccccCCCCCCcccccccccCCCCCCCCCchHHHHHHHHHHhhcCH
Q psy1036 280 IRFKSFRNFQDAQNFAYHGSCGVNTSLLEAPASPSTVTAADPSALPQVSSLAAAEKPSPFKSLKSQELVKLRKLIEKGNL 359 (399)
Q Consensus 280 ~r~~~~~~~~~a~~~a~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~t~l~~aiq~G~~ 359 (399)
...+..+.||||+|++.|+.
T Consensus 234 ------------------------------------------------------------~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 234 ------------------------------------------------------------GTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp ------------------------------------------------------------SCCCTTCCCHHHHHHHTTCH
T ss_pred ------------------------------------------------------------CCcCCCCCCHHHHHHHcCCH
Confidence 01123456899999999999
Q ss_pred HHHHHHhhcCCCeeecCCCchhHHHHhhccc
Q psy1036 360 ADVRKLVWDNPRYLVSSGDFPTILHVVCSRC 390 (399)
Q Consensus 360 ~~v~~lv~~~~~~~~~s~d~~~~l~~~~~~~ 390 (399)
++|+.|+..||+.+. |+||.++...
T Consensus 254 ~~~~~Ll~~ga~~~~------~~~h~~~~~~ 278 (497)
T 3lvq_E 254 ECEELLEQAQAGTFA------FPLHVDYSWV 278 (497)
T ss_dssp HHHHHHHHTCC--------------------
T ss_pred HHHHHHHHhCCCCCC------Ccceeecccc
Confidence 999999999999987 5667666543
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=1.7e-17 Score=132.83 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=82.3
Q ss_pred CCCCccchHHHHHHHHcCCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccc
Q psy1036 80 KSLKSQELVKLRKLIEKGNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNL 159 (399)
Q Consensus 80 ~~~~~~~~T~Lh~Aa~~G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l 159 (399)
...+.+|.|+||+||..|+.++|+ +|++.|.+++. .+..|+||||+||..|+.+++++|+++|++
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------ 82 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVR--------ILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLLEAGAD------ 82 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHH--------HHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------
T ss_pred cccCCccchHHHHHHHcCCHHHHH--------HHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 445788999999999999999999 88888988887 477899999999999999999999999987
Q ss_pred cccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHH
Q psy1036 160 LYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRL 207 (399)
Q Consensus 160 ~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~L 207 (399)
++.+|. .|+||||+|+..|+.+++++|
T Consensus 83 --------------------~~~~d~-~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 --------------------VXAQDK-FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp --------------------TTCCCT-TSCCHHHHHHHHTCHHHHHHH
T ss_pred --------------------cccccc-CCCcHHHHHHHcCCHHHHHHh
Confidence 788998 699999999999999999987
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.72 E-value=1.2e-17 Score=145.98 Aligned_cols=95 Identities=20% Similarity=0.232 Sum_probs=87.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHH
Q psy1036 126 GCRYNALHVSTKAVNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVK 205 (399)
Q Consensus 126 ~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~ 205 (399)
..|+||||+||..|+.+++++|++ |++ +|.+|. .|+||||+|+..|+.++|+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~--------------------------~~~~d~-~g~t~L~~A~~~~~~~~v~ 93 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRD--------------------------VDAVDE-NGRTALLFVAGLGSDKCVR 93 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSC--------------------------TTCCCT-TSCCHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCC--------------------------CCCcCC-CCCCHHHHHHHcCCHHHHH
Confidence 367899999999999999999999 776 789998 6999999999999999999
Q ss_pred HHHhCCCCCcccCC-CCCCcHHHHHHhCCCHHHHHHHHhccCchh
Q psy1036 206 RLIGCAKIQTSVRN-KEGKTPLDVCFKMPSVDSMGPLSTKLTPTK 249 (399)
Q Consensus 206 ~LL~~g~a~~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~~~~~~ 249 (399)
+|+++| ++++.+| ..|+||||+|+..|+.+++++|++......
T Consensus 94 ~Ll~~g-a~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 137 (183)
T 3deo_A 94 LLAEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 137 (183)
T ss_dssp HHHHTT-CCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHcC-CCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc
Confidence 999999 9999998 899999999999999999999999875433
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.71 E-value=2.5e-17 Score=159.97 Aligned_cols=90 Identities=16% Similarity=0.070 Sum_probs=84.2
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHhccCCCCCccccccCCChhHHHHHHhhhccCCCCCC--CCCCchHHHHHHHcCCHHH
Q psy1036 127 CRYNALHVSTKA-VNPAMTEMLLEIIGNPAFTNLLYDSDTPSYIERSDILLDLYVNTPD--KALNETPLHFAAKFGSVEC 203 (399)
Q Consensus 127 ~g~T~LH~Aa~~-g~~~iv~~Ll~~ga~~~~~~l~~a~~~~~~~~~~~~~~~~~vn~~d--~~~G~TpLh~Aa~~g~~~i 203 (399)
.+.|+||+|+.. |+.+++++|++.|++ +|..+ . .|+||||+|+..|+.++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad--------------------------vn~~~~~~-~g~TpLh~Aa~~g~~~i 250 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD--------------------------VNWVNGGQ-DNATPLIQATAANSLLA 250 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC--------------------------TTCCCTTT-TCCCHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC--------------------------CCcccccc-CCCCHHHHHHHCCCHHH
Confidence 456899999999 999999999999998 67776 6 69999999999999999
Q ss_pred HHHHHhCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHhc
Q psy1036 204 VKRLIGCAKIQTSVRNKEGKTPLDVCFKMPSVDSMGPLSTK 244 (399)
Q Consensus 204 v~~LL~~g~a~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 244 (399)
|++||++| ++++.+|..|+||||+|+..|+.+++++|++.
T Consensus 251 v~~LL~~G-advn~~d~~G~TpLh~A~~~g~~~~v~~LL~~ 290 (368)
T 3jue_A 251 CEFLLQNG-ANVNQADSAGRGPLHHATILGHTGLACLFLKR 290 (368)
T ss_dssp HHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHcC-CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 99999999 99999999999999999999999999999875
No 114
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.70 E-value=4e-17 Score=152.69 Aligned_cols=99 Identities=19% Similarity=0.224 Sum_probs=90.5
Q ss_pred CCCCCccchHHHHHHHHc---CCHHHHHHHHhhCChhhhhCCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHhccCCCC
Q psy1036 79 FKSLKSQELVKLRKLIEK---GNLADVRKLVWDNPRYLVSSGDFPTILHEGCRYNALHVSTKAVNPAMTEMLLEIIGNPA 155 (399)
Q Consensus 79 ~~~~~~~~~T~Lh~Aa~~---G~~~~v~~Ll~~~p~~Ll~~g~~~~~~~d~~g~T~LH~Aa~~g~~~iv~~Ll~~ga~~~ 155 (399)
+...+..|.||||+||.. |+.++|+ +|++.|++++. +|..|+||||+|+..|+.++|++|+++|++
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~--------~Ll~~ga~in~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-- 230 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVD--------FLVQNSGNLDK-QTGKGSTALHYCCLTDNAECLKLLLRGKAS-- 230 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHH--------HHHHHCSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred ccccccCCCCcchHHHHhcccchHHHHH--------HHHHCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--
Confidence 344567899999999999 8999999 88899999888 577899999999999999999999999998
Q ss_pred CccccccCCChhHHHHHHhhhccCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCC
Q psy1036 156 FTNLLYDSDTPSYIERSDILLDLYVNTPDKALNETPLHFAAKFGSVECVKRLIGCAKIQ 214 (399)
Q Consensus 156 ~~~l~~a~~~~~~~~~~~~~~~~~vn~~d~~~G~TpLh~Aa~~g~~~iv~~LL~~g~a~ 214 (399)
+|.+|. .|+||||+|+..|+.+++++|+++| ++
T Consensus 231 ------------------------~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~g-a~ 263 (278)
T 1dcq_A 231 ------------------------IEIANE-SGETPLDIAKRLKHEHCEELLTQAL-SG 263 (278)
T ss_dssp ------------------------TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHH-TT
T ss_pred ------------------------CCCccC-CCCCHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 899998 6999999999999999999999999 53
No 115
>3bsu_A Ribonuclease H1, RNAse H1; RNAse H, RNA/DNA hybrid; HET: DNA 5IU; 2.10A {Homo sapiens}
Probab=93.31 E-value=0.044 Score=36.67 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=33.3
Q ss_pred ccccHHHHHHHHHhccccccCCCCCHHHHHHHHhc
Q psy1036 3 VFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAYH 37 (399)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~a~~~~~~ 37 (399)
||++-.|+...+++-.++++|.|.+.++|+.|+..
T Consensus 16 Iy~sW~ec~~qV~g~~ga~yK~F~t~~eA~~~l~~ 50 (53)
T 3bsu_A 16 VFLTWNECRAQVDRFPAARFKKFATEDEAWAFVRK 50 (53)
T ss_dssp EESSHHHHHHHHTTCTTCEEEEESSHHHHHHHHHC
T ss_pred eECCHHHHHHHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 78999999999999999999999999999999984
No 116
>1qhk_A RNAse HI, protein (ribonuclease HI); ribonuclease HI N-terminal domain, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.100.1.2
Probab=92.33 E-value=0.045 Score=35.62 Aligned_cols=33 Identities=15% Similarity=0.358 Sum_probs=31.4
Q ss_pred ccccHHHHHHHHHhccccccCCCCCHHHHHHHH
Q psy1036 3 VFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFA 35 (399)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~a~~~~ 35 (399)
||++-.|+...+++-.++++|.|.+.++|+.|+
T Consensus 14 Iy~sW~ec~~qV~g~~ga~yK~F~t~~eA~~~l 46 (47)
T 1qhk_A 14 IYNTWNECKNQVDGYGGAIYKKFNSYEQAKSFL 46 (47)
T ss_dssp EEEEHHHHHHHSSSCSSCCCEEESCHHHHHHHH
T ss_pred eECCHHHHHHHhcCCCCCccCCCCCHHHHHHHh
Confidence 788999999999999999999999999999996
No 117
>3bsu_A Ribonuclease H1, RNAse H1; RNAse H, RNA/DNA hybrid; HET: DNA 5IU; 2.10A {Homo sapiens}
Probab=63.06 E-value=4.4 Score=26.75 Aligned_cols=34 Identities=26% Similarity=0.297 Sum_probs=31.0
Q ss_pred hhhchHHHHHHHHHhhccccccccChHHHHHHHh
Q psy1036 263 VFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFAY 296 (399)
Q Consensus 263 ~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a~ 296 (399)
+|.+..++...++...+++.|.|.+.++|+.|..
T Consensus 16 Iy~sW~ec~~qV~g~~ga~yK~F~t~~eA~~~l~ 49 (53)
T 3bsu_A 16 VFLTWNECRAQVDRFPAARFKKFATEDEAWAFVR 49 (53)
T ss_dssp EESSHHHHHHHHTTCTTCEEEEESSHHHHHHHHH
T ss_pred eECCHHHHHHHhcCCCCCccCCCCCHHHHHHHHH
Confidence 5888999999999999999999999999999984
No 118
>1qhk_A RNAse HI, protein (ribonuclease HI); ribonuclease HI N-terminal domain, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.100.1.2
Probab=53.18 E-value=4.3 Score=26.06 Aligned_cols=33 Identities=15% Similarity=0.358 Sum_probs=29.5
Q ss_pred hhhchHHHHHHHHHhhccccccccChHHHHHHH
Q psy1036 263 VFDNKEEALLFIKKNKKIRFKSFRNFQDAQNFA 295 (399)
Q Consensus 263 ~~~~~~~~l~~~~~~k~~r~~~~~~~~~a~~~a 295 (399)
+|.+..++...++...+++.+.|.+..+|+.|.
T Consensus 14 Iy~sW~ec~~qV~g~~ga~yK~F~t~~eA~~~l 46 (47)
T 1qhk_A 14 IYNTWNECKNQVDGYGGAIYKKFNSYEQAKSFL 46 (47)
T ss_dssp EEEEHHHHHHHSSSCSSCCCEEESCHHHHHHHH
T ss_pred eECCHHHHHHHhcCCCCCccCCCCCHHHHHHHh
Confidence 488888988888888999999999999999875
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=42.35 E-value=18 Score=21.95 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=17.1
Q ss_pred HHHHHHHhhcCHHHHHHHhh
Q psy1036 348 VKLRKLIEKGNLADVRKLVW 367 (399)
Q Consensus 348 t~l~~aiq~G~~~~v~~lv~ 367 (399)
-.+..|.++||.++|+.|-.
T Consensus 15 QqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHH
Confidence 36889999999999999864
Done!