Query psy10360
Match_columns 380
No_of_seqs 225 out of 1705
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 15:55:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10360.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10360hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4228|consensus 100.0 1.5E-75 3.2E-80 596.9 24.3 322 6-370 561-1086(1087)
2 PHA02742 protein tyrosine phos 100.0 6.8E-72 1.5E-76 526.1 30.3 247 5-373 47-300 (303)
3 PHA02740 protein tyrosine phos 100.0 3.3E-71 7.2E-76 517.9 29.3 241 5-374 46-293 (298)
4 PHA02747 protein tyrosine phos 100.0 5.4E-70 1.2E-74 514.8 30.8 247 5-372 46-302 (312)
5 PHA02746 protein tyrosine phos 100.0 1.1E-69 2.4E-74 514.6 30.8 251 5-374 46-319 (323)
6 PHA02738 hypothetical protein; 100.0 5.8E-69 1.3E-73 509.0 28.3 244 8-374 47-299 (320)
7 KOG0792|consensus 100.0 1.3E-64 2.7E-69 511.1 24.8 245 5-373 889-1134(1144)
8 KOG0790|consensus 100.0 1.2E-65 2.5E-70 476.2 14.0 247 6-373 268-525 (600)
9 smart00194 PTPc Protein tyrosi 100.0 8.3E-63 1.8E-67 457.1 27.6 236 5-366 22-257 (258)
10 cd00047 PTPc Protein tyrosine 100.0 1.1E-59 2.4E-64 429.4 28.0 230 12-366 1-230 (231)
11 COG5599 PTP2 Protein tyrosine 100.0 2.5E-60 5.3E-65 416.5 16.8 241 4-373 47-298 (302)
12 KOG0791|consensus 100.0 7.1E-60 1.5E-64 432.5 20.2 243 4-373 116-358 (374)
13 PF00102 Y_phosphatase: Protei 100.0 4.3E-57 9.3E-62 412.6 24.5 232 10-367 1-235 (235)
14 KOG0793|consensus 100.0 1.2E-56 2.6E-61 434.2 13.5 245 4-373 753-999 (1004)
15 PRK15375 pathogenicity island 100.0 2.7E-50 5.8E-55 386.2 25.8 219 17-370 305-531 (535)
16 KOG4228|consensus 100.0 4.3E-50 9.3E-55 410.4 14.8 206 123-369 592-797 (1087)
17 KOG0789|consensus 100.0 3.5E-48 7.7E-53 383.2 24.2 244 7-374 124-372 (415)
18 smart00404 PTPc_motif Protein 99.9 2.5E-23 5.4E-28 165.4 12.8 103 263-367 2-105 (105)
19 smart00012 PTPc_DSPc Protein t 99.9 2.5E-23 5.4E-28 165.4 12.8 103 263-367 2-105 (105)
20 PTZ00242 protein tyrosine phos 99.7 4.5E-16 9.8E-21 133.9 13.2 138 140-365 16-155 (166)
21 PTZ00393 protein tyrosine phos 99.5 1.4E-13 3E-18 122.6 12.9 136 138-364 90-225 (241)
22 KOG2836|consensus 99.2 1.6E-10 3.4E-15 92.3 12.6 133 139-361 16-149 (173)
23 cd00127 DSPc Dual specificity 99.2 1.9E-10 4.2E-15 96.0 13.3 89 261-362 48-136 (139)
24 KOG1720|consensus 99.2 1.2E-10 2.5E-15 100.5 11.1 84 271-366 123-206 (225)
25 PHA02740 protein tyrosine phos 99.2 3.6E-11 7.8E-16 113.1 5.8 40 124-164 76-115 (298)
26 PHA02742 protein tyrosine phos 99.1 3.2E-10 7E-15 107.2 10.8 41 123-164 77-117 (303)
27 PHA02747 protein tyrosine phos 99.0 5.2E-10 1.1E-14 106.2 4.7 41 123-164 77-117 (312)
28 PHA02746 protein tyrosine phos 98.9 9.1E-10 2E-14 105.0 4.5 41 123-164 97-137 (323)
29 PHA02738 hypothetical protein; 98.9 9.5E-10 2.1E-14 104.7 4.1 41 123-164 74-114 (320)
30 COG2453 CDC14 Predicted protei 98.9 1.1E-08 2.4E-13 89.4 10.4 93 269-371 78-170 (180)
31 COG5599 PTP2 Protein tyrosine 98.8 5.2E-09 1.1E-13 93.4 4.3 38 123-163 78-115 (302)
32 smart00195 DSPc Dual specifici 98.8 8.7E-08 1.9E-12 80.0 11.5 56 302-362 78-133 (138)
33 KOG0792|consensus 98.7 2.8E-08 6E-13 103.3 8.0 100 58-164 859-962 (1144)
34 smart00194 PTPc Protein tyrosi 98.7 9E-09 2E-13 95.4 3.9 41 123-164 53-93 (258)
35 cd00047 PTPc Protein tyrosine 98.7 1E-08 2.2E-13 93.3 4.1 41 123-164 25-65 (231)
36 PF00782 DSPc: Dual specificit 98.7 9.2E-08 2E-12 79.2 8.8 57 302-363 73-129 (133)
37 KOG0793|consensus 98.6 2.4E-08 5.2E-13 99.3 3.0 49 122-173 785-833 (1004)
38 PF00102 Y_phosphatase: Protei 98.5 7.2E-08 1.6E-12 87.5 3.7 40 124-164 27-66 (235)
39 PRK12361 hypothetical protein; 98.2 1.2E-05 2.7E-10 82.4 11.3 81 273-363 152-232 (547)
40 PRK15375 pathogenicity island 98.2 1.1E-06 2.3E-11 86.3 2.9 59 124-187 320-380 (535)
41 KOG0789|consensus 98.1 1.3E-06 2.9E-11 86.4 3.0 82 123-238 151-232 (415)
42 KOG0791|consensus 98.1 1.7E-06 3.8E-11 81.0 2.2 42 122-164 148-189 (374)
43 KOG0790|consensus 98.0 3E-06 6.5E-11 80.8 1.7 45 120-164 297-348 (600)
44 PF05706 CDKN3: Cyclin-depende 97.8 6.8E-05 1.5E-09 63.5 7.0 50 270-325 107-156 (168)
45 PF03162 Y_phosphatase2: Tyros 97.6 0.00021 4.5E-09 61.4 6.7 74 262-348 58-131 (164)
46 KOG1718|consensus 97.3 0.0054 1.2E-07 51.7 11.5 66 302-376 94-159 (198)
47 KOG1719|consensus 97.0 0.011 2.3E-07 49.3 10.4 61 302-371 109-169 (183)
48 KOG1716|consensus 96.9 0.004 8.7E-08 58.5 8.1 64 302-374 155-218 (285)
49 KOG2283|consensus 96.8 0.0025 5.4E-08 62.8 5.9 87 269-363 78-169 (434)
50 COG5350 Predicted protein tyro 96.7 0.0092 2E-07 49.5 8.1 53 302-358 93-145 (172)
51 PF14566 PTPlike_phytase: Inos 96.7 0.0023 5E-08 54.0 4.4 48 272-326 101-148 (149)
52 PF13350 Y_phosphatase3: Tyros 96.6 0.0037 8E-08 53.6 5.2 41 137-178 16-56 (164)
53 TIGR01244 conserved hypothetic 96.3 0.018 3.9E-07 47.7 7.8 42 302-350 86-127 (135)
54 KOG1717|consensus 96.1 0.026 5.6E-07 51.1 7.9 73 283-372 240-312 (343)
55 PF04273 DUF442: Putative phos 95.2 0.034 7.3E-07 44.3 4.5 23 302-325 86-108 (110)
56 COG2365 Protein tyrosine/serin 94.2 0.076 1.6E-06 48.9 5.0 25 302-326 136-160 (249)
57 PLN02727 NAD kinase 93.8 0.11 2.5E-06 55.2 5.9 41 278-325 324-364 (986)
58 KOG4471|consensus 92.5 0.19 4.2E-06 50.5 5.1 75 300-376 372-484 (717)
59 KOG1572|consensus 90.5 1.5 3.3E-05 39.4 8.0 40 301-346 147-186 (249)
60 PF06602 Myotub-related: Myotu 86.6 1.4 2.9E-05 42.8 5.7 26 301-326 230-255 (353)
61 KOG2386|consensus 81.7 3.6 7.7E-05 40.1 6.1 85 273-363 96-180 (393)
62 KOG1089|consensus 77.9 4.5 9.7E-05 41.2 5.6 58 301-358 343-439 (573)
63 PTZ00242 protein tyrosine phos 72.5 5 0.00011 34.4 3.9 33 58-90 18-50 (166)
64 PTZ00393 protein tyrosine phos 59.7 10 0.00022 34.5 3.3 32 58-89 94-125 (241)
65 COG3453 Uncharacterized protei 53.2 29 0.00063 28.0 4.5 14 302-316 87-100 (130)
66 KOG2836|consensus 50.3 43 0.00093 27.6 5.2 39 58-96 19-57 (173)
67 cd01518 RHOD_YceA Member of th 48.7 21 0.00045 27.3 3.2 19 301-320 60-78 (101)
68 cd01523 RHOD_Lact_B Member of 45.7 23 0.00049 27.0 3.0 18 301-319 60-77 (100)
69 KOG0208|consensus 39.9 71 0.0015 35.0 6.3 65 302-366 851-926 (1140)
70 cd01533 4RHOD_Repeat_2 Member 36.6 71 0.0015 24.6 4.6 16 302-318 66-81 (109)
71 PLN02160 thiosulfate sulfurtra 36.4 38 0.00082 27.8 3.1 17 302-319 81-97 (136)
72 COG4992 ArgD Ornithine/acetylo 35.7 70 0.0015 31.5 5.1 43 274-324 197-241 (404)
73 cd01448 TST_Repeat_1 Thiosulfa 31.3 92 0.002 24.4 4.5 18 301-319 78-95 (122)
74 COG0607 PspE Rhodanese-related 29.6 53 0.0011 25.0 2.8 17 301-318 60-76 (110)
75 cd01519 RHOD_HSP67B2 Member of 29.6 96 0.0021 23.5 4.3 17 301-318 65-81 (106)
76 TIGR03865 PQQ_CXXCW PQQ-depend 29.5 57 0.0012 27.7 3.1 19 301-319 115-133 (162)
77 PF14566 PTPlike_phytase: Inos 28.9 26 0.00056 29.3 0.9 35 62-113 104-138 (149)
78 PF02061 Lambda_CIII: Lambda P 25.8 1.4E+02 0.003 19.1 3.5 24 265-288 2-25 (45)
79 PRK10287 thiosulfate:cyanide s 24.1 1.4E+02 0.0031 23.1 4.3 17 302-319 60-76 (104)
80 cd01529 4RHOD_Repeats Member o 24.0 79 0.0017 23.7 2.8 18 301-319 55-72 (96)
81 TIGR02981 phageshock_pspE phag 22.5 1.6E+02 0.0035 22.7 4.3 18 302-320 58-75 (101)
82 cd01526 RHOD_ThiF Member of th 22.4 84 0.0018 24.9 2.7 18 301-319 71-88 (122)
83 cd01530 Cdc25 Cdc25 phosphatas 22.3 88 0.0019 24.9 2.8 21 301-321 67-87 (121)
84 TIGR00853 pts-lac PTS system, 21.9 1.3E+02 0.0027 23.1 3.5 64 302-370 3-72 (95)
85 cd01447 Polysulfide_ST Polysul 21.5 1E+02 0.0022 23.1 3.0 15 302-317 61-75 (103)
86 cd01520 RHOD_YbbB Member of th 20.5 1E+02 0.0022 24.7 2.9 20 301-320 85-104 (128)
87 cd01525 RHOD_Kc Member of the 20.4 1.1E+02 0.0023 23.2 2.9 19 302-321 65-83 (105)
88 KOG1901|consensus 20.0 6.2E+02 0.014 25.7 8.6 47 13-60 255-304 (487)
No 1
>KOG4228|consensus
Probab=100.00 E-value=1.5e-75 Score=596.91 Aligned_cols=322 Identities=34% Similarity=0.599 Sum_probs=284.6
Q ss_pred CCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEEE
Q psy10360 6 LPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVIL 85 (380)
Q Consensus 6 ~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~iv 85 (380)
-.++|..||||.||++|||+||+|.+.+++ +.+||||||||+||..++ .|||||||++.|+.||||||||+++.+||
T Consensus 561 ~~~en~~KNRY~nilayD~sRV~L~~i~Gd--~~sDYINAnyIdGy~e~n-~yIaaQgP~~eTv~DFWRMVWEq~S~~IV 637 (1087)
T KOG4228|consen 561 NKKENKQKNRYENILAYDHSRVILPPIEGD--PNSDYINANYIDGYKEPN-AYIAAQGPRPETVGDFWRMVWEQKSAGIV 637 (1087)
T ss_pred ccccccccccCCcchhhhcceeeecccCCC--ccccceeeeeeecccccc-cceeccCCcccchHHHHHHheeccCCcEE
Confidence 356799999999999999999999999886 689999999999998764 49999999999999999999999999999
Q ss_pred EeccccccCCCcccccee--------------------------------------------------------------
Q psy10360 86 MITALFENSGPKGEEKFY-------------------------------------------------------------- 103 (380)
Q Consensus 86 ~~~~~~e~~~~~~~~~~~-------------------------------------------------------------- 103 (380)
|++.+.|+++.||..||+
T Consensus 638 MvTnl~E~~r~kC~qYWP~~t~~yGdi~V~~~~~~~~a~y~iRtf~l~~~g~~~~R~v~qfhFt~Wpd~gvPe~~t~lL~ 717 (1087)
T KOG4228|consen 638 MVTNLEEFSRVKCAQYWPEGTETYGDIKVTLVQTKPLAEYGIRTFALKKQGENPKREVRQFHFTAWPDHGVPETPTGLLK 717 (1087)
T ss_pred EEecccccccccccccCCCCccccccccccceeeeeeccceEEeeeccccCCCCCceeeeeeeccCCCCCCcccchHHHH
Confidence 999999999999998764
Q ss_pred -----------------ecccCCCccc--------------------------------------eeeeec---------
Q psy10360 104 -----------------IACQAPLQNT--------------------------------------IEDFYF--------- 119 (380)
Q Consensus 104 -----------------~~~~~~~~~~--------------------------------------~~~~~~--------- 119 (380)
|||+||.||| .+||.|
T Consensus 718 f~rrvk~~~p~~aGPiVVHCSAGvGRTG~fi~iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi~~AllE~~ 797 (1087)
T KOG4228|consen 718 FRRRVKTFNPPDAGPIVVHCSAGVGRTGCFIVIDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFIHEALLEAC 797 (1087)
T ss_pred HHHHhccCCCcCCCCEEEECCCCCCCcceEEEeHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHHHHHHHHHH
Confidence 9999999997 122211
Q ss_pred --c------------------------------------------------c----------------------------
Q psy10360 120 --G------------------------------------------------A---------------------------- 121 (380)
Q Consensus 120 --~------------------------------------------------~---------------------------- 121 (380)
| .
T Consensus 798 ~~G~T~i~~~~~~~~~~~l~~~~p~~~~t~le~EF~~L~~~~~~~~~~~~~~l~~N~~KNR~~~i~P~d~~rv~L~~~~G 877 (1087)
T KOG4228|consen 798 LCGDTEVPASTLAPYSQKLKRIDPPENKTGLEEEFKTLNSCKPRTRMMICGNLPENKSKNRQVNILPYDRNRVILIPTHG 877 (1087)
T ss_pred hcCCccccHHHHHHHHHHhccCCCCCCCcchHHHHHHHhhccccchhhhccccchhcccccccccCCchhcccceeccCC
Confidence 0 0
Q ss_pred cccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCccccccccccce
Q psy10360 122 MKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDF 201 (380)
Q Consensus 122 ~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~ 201 (380)
..+++|+|+|++|+. +.+.|||+|.|+.+|++|||+|+|++++.+||||++..+. ++|.+|||.+.
T Consensus 878 ~~sdYINAs~idgy~-~~~~fivtq~PL~~T~~DFWrmi~d~~~tsiVmL~~l~~~--~~C~qyw~~~g----------- 943 (1087)
T KOG4228|consen 878 ESSDYINASFIDGYR-QPKAFIVTQGPLAETVEDFWRMIWDQNVTSIVMLTELKHP--EKCPQYWPPEG----------- 943 (1087)
T ss_pred CcccccchhhhcccC-CcceEEEecCCcccchHHHHHHhhccceeEEEEecccCcc--cccccccCCcC-----------
Confidence 123589999999986 5668999999999999999999999999999999998776 89999999632
Q ss_pred eeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeecceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChh
Q psy10360 202 QITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVREKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEES 281 (380)
Q Consensus 202 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~ 281 (380)
...+|.++|+.........++.|.|.|++...+..++|.+|||++||..+.|+...
T Consensus 944 ------------------------~~~yg~i~Ve~~~~~~~~~~t~r~f~i~n~~~~~~r~v~qfq~~~WP~~~~~p~~~ 999 (1087)
T KOG4228|consen 944 ------------------------SQRYGPIEVEDMNEHINPQYTAREFGVTNEREKQSRTVRQFQFTGWPEYGKPPQSK 999 (1087)
T ss_pred ------------------------ceecCcEEEEecccccchhhhhhhheeeeccccCceEEEEEEecCCcccCcCCCCc
Confidence 45689999999999999999999999999998999999999999999988887766
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHH
Q psy10360 282 SLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFI 361 (380)
Q Consensus 282 ~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fi 361 (380)
..+..+..+.+..+.... .+|++|||++|+||+|+|||+.+++++++.++.|||+++|+.||.+|++||++.+||.||
T Consensus 1000 ~~~~~i~~~~~~~q~~~~--~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~~rp~mv~t~~QY~fc 1077 (1087)
T KOG4228|consen 1000 GPISKIPSVASKWQQLGA--DGPIIVHCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRFQRPGMVDTSDQYQFC 1077 (1087)
T ss_pred chhhhHHHHHHHHHhhcC--CCCEEEEEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhhcCccccCcHHHHHHH
Confidence 666665555444443322 799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy10360 362 YRVLNVYAS 370 (380)
Q Consensus 362 y~~l~~y~~ 370 (380)
|+++++|+.
T Consensus 1078 Ydv~~~y~~ 1086 (1087)
T KOG4228|consen 1078 YDVALEYLG 1086 (1087)
T ss_pred HHHHHHhhc
Confidence 999999973
No 2
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=6.8e-72 Score=526.09 Aligned_cols=247 Identities=30% Similarity=0.557 Sum_probs=221.7
Q ss_pred CCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEE
Q psy10360 5 ELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVI 84 (380)
Q Consensus 5 ~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~i 84 (380)
...++|..||||.||+|||||||+|+..++ .+||||||||+|+..+++ ||||||||++|+.|||+|||++++.+
T Consensus 47 ~~~~~N~~KNRy~~i~~~D~tRV~L~~~~~----~~dYINAsyI~g~~~~~~-fIatQ~Pl~~T~~dFW~MVw~~~~~v- 120 (303)
T PHA02742 47 SLELKNMKKCRYPDAPCFDRNRVILKIEDG----GDDFINASYVDGHNAKGR-FICTQAPLEETALDFWQAIFQDQVRV- 120 (303)
T ss_pred ccChhhhhcCCCCCCCCCCCCEEEeCCCCC----CCCcEEEeeecCCCCCCe-EEEECCCCcccHHHHHHHHhhcCCCe-
Confidence 456889999999999999999999986443 689999999999987655 99999999999999999999999988
Q ss_pred EEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 85 LMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 85 v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
T Consensus 121 -------------------------------------------------------------------------------- 120 (303)
T PHA02742 121 -------------------------------------------------------------------------------- 120 (303)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeecc
Q psy10360 165 SKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVREK 244 (380)
Q Consensus 165 v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~~ 244 (380)
|||||+..|.+..+|.+|||+++ +....+|.|+|++.+.+....
T Consensus 121 ---IVmLt~~~E~g~~kc~~YWp~~~---------------------------------~~~~~~g~~~V~~~~~~~~~~ 164 (303)
T PHA02742 121 ---IVMITKIMEDGKEACYPYWMPHE---------------------------------RGKATHGEFKIKTKKIKSFRN 164 (303)
T ss_pred ---EEEcchhhhCCeeeccccCCCCC---------------------------------CCceEEEEEEEEEEEEEEcCC
Confidence 78888888999999999999764 345679999999999888889
Q ss_pred eEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhh-------cCCCCCCEEEEcCCCCChhH
Q psy10360 245 YVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGA-------AGREAGPLVIHCSPGTGRTG 317 (380)
Q Consensus 245 ~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~-------~~~~~~PivVHCs~GvGRtG 317 (380)
+++++|.+.+.+.+.++.|+||||++|||+|+|.++..+++|+..++...... .....+|||||||+|+||||
T Consensus 165 ~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRTG 244 (303)
T PHA02742 165 YAVTNLCLTDTNTGASLDIKHFAYEDWPHGGLPRDPNKFLDFVLAVREADLKADVDIKGENIVKEPPILVHCSAGLDRAG 244 (303)
T ss_pred EEEEEEEEEECCCCceEEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHhhhccccccccccCCCCCeEEECCCCCchhH
Confidence 99999999987778899999999999999999999999999999988743211 11235899999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhc
Q psy10360 318 TVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLT 373 (380)
Q Consensus 318 ~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~ 373 (380)
+|||+|++++++..++.+||+++|+.||+||++||||.+||.|||++|++|++...
T Consensus 245 tF~aid~~i~~~~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~y~~~~~ 300 (303)
T PHA02742 245 AFCAIDICISKYNERAIIPLLSIVRDLRKQRHNCLSLPQQYIFCYFIVLIFAKLMA 300 (303)
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999998764
No 3
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=3.3e-71 Score=517.91 Aligned_cols=241 Identities=18% Similarity=0.405 Sum_probs=213.1
Q ss_pred CCCCCCcCCCC--CCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCc
Q psy10360 5 ELPPGTEDKNR--YANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSK 82 (380)
Q Consensus 5 ~~~~~n~~kNR--~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~ 82 (380)
...++|..||| |.||+|||||||+|.+ ++||||||||+|+..+++ |||||+||++|+.|||+||||+++.
T Consensus 46 ~~~~~n~~knr~r~~~i~~~D~sRV~L~~-------~~~YINAnyVdG~~~~~~-fIaTQ~Pl~~T~~dFW~MVwe~~~~ 117 (298)
T PHA02740 46 CAQAENKAKDENLALHITRLLHRRIKLFN-------DEKVLDARFVDGYDFEQK-FICIINLCEDACDKFLQALSDNKVQ 117 (298)
T ss_pred hhchhhhcccccccCCcCCccCceEEecC-------CCCcEEEEEecCCCCCCc-EEEecCCchhhHHHHHHHHHhcCCC
Confidence 35678999996 5899999999999953 568999999999998766 9999999999999999999999999
Q ss_pred EEEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHh
Q psy10360 83 VILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWT 162 (380)
Q Consensus 83 ~iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~ 162 (380)
+
T Consensus 118 i------------------------------------------------------------------------------- 118 (298)
T PHA02740 118 I------------------------------------------------------------------------------- 118 (298)
T ss_pred E-------------------------------------------------------------------------------
Confidence 8
Q ss_pred CCCcEEEEcCCCccCCccccc-ccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEe
Q psy10360 163 HQSKVILMITALFENSVEKCA-DYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREV 241 (380)
Q Consensus 163 ~~v~~IVmL~~~~E~~~~kc~-~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~ 241 (380)
|||||...| .+|. +|||.++ +....+|.|+|++.+...
T Consensus 119 -----IVMLt~~~e---~kc~~~YWP~~~---------------------------------~~~~~~g~f~V~~~~~~~ 157 (298)
T PHA02740 119 -----IVLISRHAD---KKCFNQFWSLKE---------------------------------GCVITSDKFQIETLEIII 157 (298)
T ss_pred -----EEEcccccc---ccccccCCCCCC---------------------------------CCeEEECCEEEEEEEEEe
Confidence 677776655 4788 9999764 345678999999999888
Q ss_pred ecceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhh----hcCCCCCCEEEEcCCCCChhH
Q psy10360 242 REKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKG----AAGREAGPLVIHCSPGTGRTG 317 (380)
Q Consensus 242 ~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~----~~~~~~~PivVHCs~GvGRtG 317 (380)
...++++.|.+++ .++++|.|+||||++|||+|+|.++..+++|+..++..... ......+|||||||||+||||
T Consensus 158 ~~~~~~~~l~l~~-~~~~~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~PIVVHCSaGvGRTG 236 (298)
T PHA02740 158 KPHFNLTLLSLTD-KFGQAQKISHFQYTAWPADGFSHDPDAFIDFFCNIDDLCADLEKHKADGKIAPIIIDCIDGISSSA 236 (298)
T ss_pred cCCEEEEEEEEEc-CCCCcEEEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEECCCCCchhH
Confidence 9999999999987 45778999999999999999999999999999988765321 122236899999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcC
Q psy10360 318 TVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLTG 374 (380)
Q Consensus 318 ~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~ 374 (380)
+|||+|++++++..++.+||+++|++||+||++|||+.+||.|||++|++|++..+|
T Consensus 237 tFcaiDi~l~~~~~~~~vdi~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~yl~~~~~ 293 (298)
T PHA02740 237 VFCVFDICATEFDKTGMLSIANALKKVRQKKYGCMNCLDDYVFCYHLIAAYLKEKFD 293 (298)
T ss_pred HHHHHHHHHHHHHhcCcccHHHHHHHHHhhCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999988764
No 4
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=5.4e-70 Score=514.81 Aligned_cols=247 Identities=31% Similarity=0.560 Sum_probs=220.1
Q ss_pred CCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEE
Q psy10360 5 ELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVI 84 (380)
Q Consensus 5 ~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~i 84 (380)
...++|..||||.||+|||||||+|.+.++ +.+||||||||+|+..+++ |||||+||++|+.|||+|||++++.+
T Consensus 46 ~~~~~N~~kNRy~di~p~D~sRV~L~~~~~---~~~dYINAsyV~g~~~~~~-yIaTQ~Pl~~T~~dFW~MVwe~~~~~- 120 (312)
T PHA02747 46 FEKPENQPKNRYWDIPCWDHNRVILDSGGG---STSDYIHANWIDGFEDDKK-FIATQGPFAETCADFWKAVWQEHCSI- 120 (312)
T ss_pred hhCchhhccCCCCCCCCCCCCEeEecCCCC---CCCCcEEeeeecCCCCCCe-EEEeCCCcchhHHHHHHHHHhccCCE-
Confidence 346789999999999999999999987554 3689999999999987655 99999999999999999999999988
Q ss_pred EEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 85 LMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 85 v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
T Consensus 121 -------------------------------------------------------------------------------- 120 (312)
T PHA02747 121 -------------------------------------------------------------------------------- 120 (312)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEcCCCc-cCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeec
Q psy10360 165 SKVILMITALF-ENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVRE 243 (380)
Q Consensus 165 v~~IVmL~~~~-E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~ 243 (380)
|||||... |++.++|.+|||.++ +....+|.|.|++.+.....
T Consensus 121 ---IVMLt~~~~e~g~~kc~~YWp~~~---------------------------------~~~~~~g~~~V~~~~~~~~~ 164 (312)
T PHA02747 121 ---IVMLTPTKGTNGEEKCYQYWCLNE---------------------------------DGNIDMEDFRIETLKTSVRA 164 (312)
T ss_pred ---EEEcccccccCCcccccccCCCCC---------------------------------CCCeEeeeEEEEEEEEEecC
Confidence 78888887 788999999999764 44567999999999998889
Q ss_pred ceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhc------CCCCCCEEEEcCCCCChhH
Q psy10360 244 KYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAA------GREAGPLVIHCSPGTGRTG 317 (380)
Q Consensus 244 ~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~------~~~~~PivVHCs~GvGRtG 317 (380)
.++.+.|.+++...+..|.|+||||++|||+++|.+...+++|+..++...+... ....+|||||||+|+||||
T Consensus 165 ~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRtG 244 (312)
T PHA02747 165 KYILTLIEITDKILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLFNPKDALLCPIVVHCSDGVGKTG 244 (312)
T ss_pred CeEEEEEEEEECCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhccccccccCCCCEEEEecCCCcchh
Confidence 9999999999877788999999999999999999999999999887766533211 1124899999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHH---HHHHHHHHHHh
Q psy10360 318 TVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFI---YRVLNVYASKL 372 (380)
Q Consensus 318 ~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fi---y~~l~~y~~~~ 372 (380)
+|||+|++++++..++.+||+++|+.||+||++||+|.+||.|| |++|.+|+...
T Consensus 245 tfcaidi~i~~l~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~~~~Y~~l~~~~~~~ 302 (312)
T PHA02747 245 IFCAVDICLNQLVKRKAICLAKTAEKIREQRHAGIMNFDDYLFIQPGYEVLHYFLSKI 302 (312)
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 99999998776
No 5
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.1e-69 Score=514.62 Aligned_cols=251 Identities=29% Similarity=0.522 Sum_probs=218.3
Q ss_pred CCCCCCcCCCCCCCCCCCCCCeeEecCCCC-----------------CCCCCCCceeecccCCCCCCCceEEEeCCCCcC
Q psy10360 5 ELPPGTEDKNRYANVIPIPETRVRLCSGGE-----------------AASDSEDYINANYVRGPKGEEKFYIACQAPLQN 67 (380)
Q Consensus 5 ~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~-----------------~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~ 67 (380)
...++|..||||.||+|||||||+|...++ +.++.+||||||||+|+...++ |||||+||++
T Consensus 46 ~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~dYINAsyV~g~~~~~~-fIaTQ~Pl~~ 124 (323)
T PHA02746 46 FLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDGKKIEVTSEDNAENYIHANFVDGFKEANK-FICAQGPKED 124 (323)
T ss_pred ccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccccccccccCCCCCCeEEEecccCCCCCCe-EEEeCCCChh
Confidence 457889999999999999999999986432 0124589999999999987655 9999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecC
Q psy10360 68 TIEDFWRMIWTHQSKVILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQA 147 (380)
Q Consensus 68 t~~dFW~mi~~~~~~~iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~ 147 (380)
|+.|||+|||++++.+
T Consensus 125 T~~dFW~MIwe~~v~v---------------------------------------------------------------- 140 (323)
T PHA02746 125 TSEDFFKLISEHESQV---------------------------------------------------------------- 140 (323)
T ss_pred hHHHHHHHHHhhCCCE----------------------------------------------------------------
Confidence 9999999999999988
Q ss_pred CCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccce
Q psy10360 148 PLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHR 227 (380)
Q Consensus 148 Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 227 (380)
|||||+.. .+..+|.+|||..+ +...
T Consensus 141 --------------------IVMLt~~~-e~~~kc~~YWP~~~---------------------------------~~~~ 166 (323)
T PHA02746 141 --------------------IVSLTDID-DDDEKCFELWTKEE---------------------------------DSEL 166 (323)
T ss_pred --------------------EEEecccc-cCCccCCCCCCCCC---------------------------------CCCe
Confidence 67777654 45678999999764 3456
Q ss_pred eecceEEEEEEEEeecceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhh------cCCC
Q psy10360 228 VFGDFQITLKKREVREKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGA------AGRE 301 (380)
Q Consensus 228 ~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~------~~~~ 301 (380)
.+|.|.|++.+......++.+.|.+++...+..|.|+||||++|||+|+|.++..+++|+..++...... ....
T Consensus 167 ~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~ 246 (323)
T PHA02746 167 AFGRFVAKILDIIEELSFTKTRLMITDKISDTSREIHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAELIKQADNDPQT 246 (323)
T ss_pred EEcCEEEEEEEEEEcCCeEEEEEEEEECCCCCceEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHhhhhccCCCC
Confidence 7999999998888788899999999987778889999999999999999999999999999988764321 1122
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcC
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLTG 374 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~ 374 (380)
.+|||||||+|+||||+|||+|+++++++.++.+||+++|+.||+||++||||.+||.|||++|.+|+.+...
T Consensus 247 ~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~~l~~~~~ 319 (323)
T PHA02746 247 LGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKEVCLGEIVLKIRKQRHSSVFLPEQYAFCYKALKYAIIEEAK 319 (323)
T ss_pred CCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHhhh
Confidence 4899999999999999999999999999999999999999999999999999999999999999999876543
No 6
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-69 Score=509.05 Aligned_cols=244 Identities=34% Similarity=0.577 Sum_probs=217.8
Q ss_pred CCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEEEEe
Q psy10360 8 PGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMI 87 (380)
Q Consensus 8 ~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~ 87 (380)
..|..||||.||+||||+||+|+..++ .+||||||||+|+..+++ ||+||+|+++|++|||+|||++++.+
T Consensus 47 ~~N~~kNR~~~v~~~d~sRV~L~~~~~----~~dYINAsyVdg~~~~~k-fI~TQ~Pl~~T~~dFW~MVwe~~v~~---- 117 (320)
T PHA02738 47 KKNRKLNRYLDAVCFDHSRVILPAERN----RGDYINANYVDGFEYKKK-FICGQAPTRQTCYDFYRMLWMEHVQI---- 117 (320)
T ss_pred HHhhhhCCCCCcCCCcCCEEEeCCCCC----CCCceEeEEecCCCCCce-eEEecCCChHHHHHHHHHHHHhCCcE----
Confidence 349999999999999999999975432 689999999999998766 99999999999999999999999988
Q ss_pred ccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcE
Q psy10360 88 TALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKV 167 (380)
Q Consensus 88 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~ 167 (380)
T Consensus 118 -------------------------------------------------------------------------------- 117 (320)
T PHA02738 118 -------------------------------------------------------------------------------- 117 (320)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeecceEE
Q psy10360 168 ILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVREKYVI 247 (380)
Q Consensus 168 IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~~~~~ 247 (380)
|||||+..|.+.++|.+|||..+ +....+|+|+|++.+....+.++.
T Consensus 118 IVmL~~~~E~~~~kc~~YWp~~~---------------------------------~~~~~~g~f~V~~~~~~~~~~~~~ 164 (320)
T PHA02738 118 IVMLCKKKENGREKCFPYWSDVE---------------------------------QGSIRFGKFKITTTQVETHPHYVK 164 (320)
T ss_pred EEEeeehhhCCeeeccccCCCCC---------------------------------CCceEeccEEEEEEEEEecCCeEE
Confidence 78888888889999999999764 456789999999999999999999
Q ss_pred EEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhh------cC---CCCCCEEEEcCCCCChhHH
Q psy10360 248 SSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGA------AG---REAGPLVIHCSPGTGRTGT 318 (380)
Q Consensus 248 ~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~------~~---~~~~PivVHCs~GvGRtG~ 318 (380)
+.|.+++ +++..+.|.||||++|||+|+|.++..+++|+..+++..+.. .+ ...+|||||||+|+||||+
T Consensus 165 ~~l~l~~-~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~GiGRtGt 243 (320)
T PHA02738 165 STLLLTD-GTSATQTVTHFNFTAWPDHDVPKNTSEFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHCNAGLGRTPC 243 (320)
T ss_pred EEEEEEe-CCCCcEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEcCCCCChhhh
Confidence 9999987 567789999999999999999999999999999988754311 11 1247999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcC
Q psy10360 319 VLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLTG 374 (380)
Q Consensus 319 f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~ 374 (380)
|||+|++++++..++.+||+++|+.||+||++||++.+||.|||++|++|+.....
T Consensus 244 Fcaidi~i~~~~~~~~vdv~~~V~~lR~qR~~~vqt~~QY~F~y~~l~~y~~~~~~ 299 (320)
T PHA02738 244 YCVVDISISRFDACATVSIPSIVSSIRNQRYYSLFIPFQYFFCYRAVKRYVNLTVN 299 (320)
T ss_pred hhHHHHHHHHHHhcCCcCHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999976543
No 7
>KOG0792|consensus
Probab=100.00 E-value=1.3e-64 Score=511.07 Aligned_cols=245 Identities=35% Similarity=0.632 Sum_probs=224.8
Q ss_pred CCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCC-CceEEEeCCCCcCCHHHHHHHHHhcCCcE
Q psy10360 5 ELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGE-EKFYIACQAPLQNTIEDFWRMIWTHQSKV 83 (380)
Q Consensus 5 ~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~-~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~ 83 (380)
+.+|+|..||||+||+|||.|||.|.+..+. ...|||||+|+.+-+. ...|||||||||.|+.|||+||||+++.+
T Consensus 889 a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~~---nagYINAS~i~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~l 965 (1144)
T KOG0792|consen 889 ARLPENAPKNRYRDVLPYDDTRVELQPSKDN---NAGYINASHIEIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGSTL 965 (1144)
T ss_pred ccccccccccccCCcCCCcCceeeeccCCCC---CcccccceeeEeeecceeEEEEEecCCCcchHHHHHHHHHhcCceE
Confidence 4678999999999999999999999877653 6799999999987443 44599999999999999999999998888
Q ss_pred EEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhC
Q psy10360 84 ILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTH 163 (380)
Q Consensus 84 iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~ 163 (380)
T Consensus 966 -------------------------------------------------------------------------------- 965 (1144)
T KOG0792|consen 966 -------------------------------------------------------------------------------- 965 (1144)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeec
Q psy10360 164 QSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVRE 243 (380)
Q Consensus 164 ~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~ 243 (380)
|||||...|.|+.||.+|||... -....+|.|+|++..++...
T Consensus 966 ----IvMlT~e~EggR~KchqYWPr~~---------------------------------~~t~~ygrf~v~~~~~~~t~ 1008 (1144)
T KOG0792|consen 966 ----IVMLTTEVEGGRVKCHQYWPRLG---------------------------------HETMEYGRFQVTCVFEQQTT 1008 (1144)
T ss_pred ----EEEEeehhhcCeeccccccCCCC---------------------------------ccceeccceEEEEEEecccc
Confidence 78888888999999999999752 23678999999999999999
Q ss_pred ceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHH
Q psy10360 244 KYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACD 323 (380)
Q Consensus 244 ~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~ 323 (380)
.|+.|.+.+++..+++.|.|+|+||++|||||+|+++..||+|+.+++..++.. +.|||||||||+|||||+|.++
T Consensus 1009 ~y~tr~m~l~~~~t~eeR~V~hLQYtaWPDHg~P~D~~~FL~FleevrsvR~~t----~pPilvHCSAGiGRTGVlIl~e 1084 (1144)
T KOG0792|consen 1009 CYVTREMTLKDLQTREERTVWHLQYTAWPDHGVPDDPNDFLDFLEEVRSVRRGT----NPPILVHCSAGIGRTGVLILME 1084 (1144)
T ss_pred cEEEEeEEEeeccCCceeeeeeeeecccccCCCCCChHHHHHHHHHHHHHhccC----CCCeEEEccCCCCcceehHHHH
Confidence 999999999999999999999999999999999999999999999999886643 6799999999999999999999
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhc
Q psy10360 324 ILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLT 373 (380)
Q Consensus 324 ~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~ 373 (380)
.++-.++.+..+|+.++|..||.||..||||+.||.|||++|+.|+++.+
T Consensus 1085 ~~l~lle~Ne~vdi~divr~mR~QR~~mVQT~~QYkFVyevil~~l~~~~ 1134 (1144)
T KOG0792|consen 1085 TALCLLEHNEPVDILDIVRTMRDQRAMMVQTLSQYKFVYEVILRVLKRGR 1134 (1144)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHhhhccchHHhhHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999998765
No 8
>KOG0790|consensus
Probab=100.00 E-value=1.2e-65 Score=476.23 Aligned_cols=247 Identities=36% Similarity=0.665 Sum_probs=206.4
Q ss_pred CCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCC-------CCCCceEEEeCCCCcCCHHHHHHHHHh
Q psy10360 6 LPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGP-------KGEEKFYIACQAPLQNTIEDFWRMIWT 78 (380)
Q Consensus 6 ~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~-------~~~~~~~I~tQ~P~~~t~~dFW~mi~~ 78 (380)
--|+|+.||||+||+|||||||+|...+.+. +++||||||||-.- ...+|.||||||-|.+|+.|||+|||+
T Consensus 268 ~r~eN~~KNRYkNIlPfDHtRViL~d~~~n~-pgsdYINAnyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQ 346 (600)
T KOG0790|consen 268 QRPENKGKNRYKNILPFDHTRVILQDRDPNI-PGSDYINANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVWQ 346 (600)
T ss_pred ccchhhccccccccCcccceeeEeecCCCCC-ccchhcccchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHHh
Confidence 3578999999999999999999998776654 58999999999421 122334666666666666666666666
Q ss_pred cCCcEEEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHH
Q psy10360 79 HQSKVILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWR 158 (380)
Q Consensus 79 ~~~~~iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~ 158 (380)
+|++|
T Consensus 347 ENsrV--------------------------------------------------------------------------- 351 (600)
T KOG0790|consen 347 ENSRV--------------------------------------------------------------------------- 351 (600)
T ss_pred ccceE---------------------------------------------------------------------------
Confidence 66655
Q ss_pred HHHhCCCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEE
Q psy10360 159 MIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKK 238 (380)
Q Consensus 159 mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~ 238 (380)
|||-+...|.|+.||.+|||.. +....||.+.|++.+
T Consensus 352 ---------IVMtTkE~ERgK~KC~~YWPee----------------------------------~~~e~~G~~~v~~v~ 388 (600)
T KOG0790|consen 352 ---------IVMTTKEVERGKSKCVKYWPEE----------------------------------GALEEYGVMRVRNVK 388 (600)
T ss_pred ---------EEEehhhhhcccccccccCCcc----------------------------------cchhhcCceEEEecc
Confidence 7777777788999999999954 334578999999999
Q ss_pred EEeecceEEEEEEEeecC-CcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhH
Q psy10360 239 REVREKYVISSLQIKNLE-TNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTG 317 (380)
Q Consensus 239 ~~~~~~~~~~~l~v~~~~-~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG 317 (380)
+.....|+.|+|.+.... .+..|.|+||||..|||||+|.+|..+|+|+.++...... ....||||||||||+||||
T Consensus 389 E~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~--l~~AgpIvVHCSAGIGrTG 466 (600)
T KOG0790|consen 389 ESDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQES--LMDAGPIVVHCSAGIGRTG 466 (600)
T ss_pred ccccccceehheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhcc--ccccCcEEEEccCCcCCcc
Confidence 999999999999998654 4567999999999999999999999999999999876433 2336899999999999999
Q ss_pred HHHHHHHHHHHHhhCC---CCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhc
Q psy10360 318 TVLACDILIRHFETSR---SVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLT 373 (380)
Q Consensus 318 ~f~al~~~~~~l~~~~---~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~ 373 (380)
+|++||++++++...+ .+||..+++.+|.||.|||||..||.|+|.++.+|++.+.
T Consensus 467 TfiViD~lld~I~~~Gldc~iDi~ktIqmVRsqRSGmVQTEaQYkFiY~Avqhyietl~ 525 (600)
T KOG0790|consen 467 TFIVIDMLLDQIREKGLDCDIDIQKTIQMVRSQRSGMVQTEAQYKFIYVAVQHYIETLQ 525 (600)
T ss_pred eEEEhHHHHHHHHhcCCCCcccHHHHHHHHHHHhcchhhhHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999775 5899999999999999999999999999999999998753
No 9
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=8.3e-63 Score=457.14 Aligned_cols=236 Identities=42% Similarity=0.793 Sum_probs=214.3
Q ss_pred CCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEE
Q psy10360 5 ELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVI 84 (380)
Q Consensus 5 ~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~i 84 (380)
...++|..||||.||+|||+|||+|.+.++ +.+||||||||+|+...++ ||+||+||++|++|||+|||++++++
T Consensus 22 ~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~---~~~~YInAs~v~~~~~~~~-fI~tQ~P~~~t~~dFW~mv~~~~~~~- 96 (258)
T smart00194 22 AARPENRDKNRYKDVLPYDHTRVKLTPPPG---EGSDYINASYIDGPNGPKA-YIATQGPLPSTVEDFWRMVWEEKVTT- 96 (258)
T ss_pred cCCccccccCCCCCCCCCCCCEeEccCCCC---CCCCceeeeeEecCCCccc-eEEeCCCchHHHHHHHHHHHhcCCCE-
Confidence 457889999999999999999999987653 3689999999999976655 99999999999999999999998888
Q ss_pred EEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 85 LMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 85 v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
T Consensus 97 -------------------------------------------------------------------------------- 96 (258)
T smart00194 97 -------------------------------------------------------------------------------- 96 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeecc
Q psy10360 165 SKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVREK 244 (380)
Q Consensus 165 v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~~ 244 (380)
||||++..|.+..+|.+|||.+. ....+|.|+|++.+.+....
T Consensus 97 ---IVmL~~~~e~~~~~~~~Ywp~~~----------------------------------~~~~~g~~~V~~~~~~~~~~ 139 (258)
T smart00194 97 ---IVMLTELEEKGREKCAQYWPEEE----------------------------------EPLTYGDITVTLKSVEKVDD 139 (258)
T ss_pred ---EEEeccceeCCEeeccccCCCCC----------------------------------CcceECCEEEEEEEEEecCC
Confidence 78888888888899999999752 24678999999999999999
Q ss_pred eEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHH
Q psy10360 245 YVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDI 324 (380)
Q Consensus 245 ~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~ 324 (380)
++.|+|.|++.+.+..+.|+||||.+|||+++|.+...+++++..++..... ..+||+|||++|+||||+|||+++
T Consensus 140 ~~~~~l~v~~~~~~~~~~v~~~~y~~W~d~~~P~~~~~~~~~i~~v~~~~~~----~~~pivVHC~~G~gRsg~f~a~~~ 215 (258)
T smart00194 140 YTIRTLEVTNTGCSETRTVTHYHYTNWPDHGVPESPKSILDLVRAVRKSQST----STGPIVVHCSAGVGRTGTFIAIDI 215 (258)
T ss_pred EEEEEEEEEECCCCCcEEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHhhcc----CCCCEEEEeCCCCCccchhhHHHH
Confidence 9999999999777789999999999999999999999999999998876432 268999999999999999999999
Q ss_pred HHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHH
Q psy10360 325 LIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLN 366 (380)
Q Consensus 325 ~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~ 366 (380)
+++++..++.+|+.++++.||+||++||++.+||.|||.+|+
T Consensus 216 ~~~~l~~~~~v~v~~~v~~lR~~R~~~v~~~~Qy~f~~~~l~ 257 (258)
T smart00194 216 LLQQLEAGKEVDIFEIVKELRSQRPGMVQTEEQYIFLYRAIL 257 (258)
T ss_pred HHHHHHHcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999986
No 10
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=1.1e-59 Score=429.36 Aligned_cols=230 Identities=42% Similarity=0.785 Sum_probs=208.2
Q ss_pred CCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEEEEecccc
Q psy10360 12 DKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALF 91 (380)
Q Consensus 12 ~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~~~~~ 91 (380)
.||||+|++|||+|||+|.+.+. ..++|||||||+|+...++ ||+||+|+++|++|||+|||++++++
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~~~---~~~~yinA~~v~~~~~~~~-fI~tQ~P~~~t~~~FW~mv~~~~~~~-------- 68 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPDDD---EGSDYINASYIDGYNPPKA-YIATQGPLPNTVEDFWRMVWEQKVPV-------- 68 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCCCC---CCCCcEEeeeEecCCCCcc-eEEcCCCChhhHHHHHHHHHhcCCCE--------
Confidence 59999999999999999987542 3689999999999997655 89999999999999999999998888
Q ss_pred ccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEc
Q psy10360 92 ENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMI 171 (380)
Q Consensus 92 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL 171 (380)
||||
T Consensus 69 ----------------------------------------------------------------------------IV~l 72 (231)
T cd00047 69 ----------------------------------------------------------------------------IVML 72 (231)
T ss_pred ----------------------------------------------------------------------------EEEc
Confidence 7888
Q ss_pred CCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeecceEEEEEE
Q psy10360 172 TALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVREKYVISSLQ 251 (380)
Q Consensus 172 ~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~ 251 (380)
++..|.+.++|.+|||.+. ....+|.|+|++.+.+..+.++.++|.
T Consensus 73 ~~~~e~~~~~~~~Ywp~~~----------------------------------~~~~~g~~~V~~~~~~~~~~~~~~~l~ 118 (231)
T cd00047 73 TELVEKGREKCAQYWPEEE----------------------------------GSLTYGDITVTLVSEEKLDDYTVRTLK 118 (231)
T ss_pred cccccCCCccCccCCCCCC----------------------------------CCeEecCEEEEEEEEEEcCCEEEEEEE
Confidence 8888888899999999752 246789999999999999999999999
Q ss_pred EeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhh
Q psy10360 252 IKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFET 331 (380)
Q Consensus 252 v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~ 331 (380)
|++.+.+..+.|+||||.+||++++|.+...+++++..++..... ...+|++|||++|+||||+|||++++++++..
T Consensus 119 i~~~~~~~~~~V~~~~~~~W~d~~~p~~~~~~~~~~~~v~~~~~~---~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~ 195 (231)
T cd00047 119 LSNTGTGETRTVTHFQYTGWPDHGVPESPDSLLDLLRKVRKSQQQ---PGSGPIVVHCSAGVGRTGTFIAIDILLQRLEA 195 (231)
T ss_pred EEECCCCCceEEEEEeECCCCCCCccCChHHHHHHHHHHHHHhcc---CCCCCeEEECCCCCCccchHHHHHHHHHHHHh
Confidence 999777889999999999999999999989999999988876432 23689999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHH
Q psy10360 332 SRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLN 366 (380)
Q Consensus 332 ~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~ 366 (380)
++.+++.++++.||++|+++|++.+||.|||++|+
T Consensus 196 ~~~~~~~~~v~~iR~~R~~~v~~~~Qy~f~~~~l~ 230 (231)
T cd00047 196 EGVVDIFQTVKELRSQRPGMVQTEEQYIFLYRAIL 230 (231)
T ss_pred cCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999986
No 11
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-60 Score=416.45 Aligned_cols=241 Identities=33% Similarity=0.600 Sum_probs=193.8
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcE
Q psy10360 4 DELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKV 83 (380)
Q Consensus 4 ~~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~ 83 (380)
+-|++-|.+||||.||+||++|||.|+... ...||||||||+...+. |||||||.++|..|||.|||......
T Consensus 47 ~sls~~~~~rNRYsnIvPYe~tRV~Lk~~k----~~~DYINAS~ik~~~~~---yIAtQgP~~~t~ddFW~mvw~n~~~~ 119 (302)
T COG5599 47 TSLSSTNYARNRYSNIVPYEHTRVHLKYGK----SINDYINASYIKTPRGK---YIATQGPKPETIDDFWKMVWHNVPNN 119 (302)
T ss_pred cccCccccccccccccccccCceeeccCCC----chhhcccceeeecCCCc---eEEecCCCCchHHHHHHHHHhcCCCc
Confidence 347888999999999999999999998762 26899999999988743 99999999999999999999987732
Q ss_pred EEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhC
Q psy10360 84 ILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTH 163 (380)
Q Consensus 84 iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~ 163 (380)
T Consensus 120 -------------------------------------------------------------------------------- 119 (302)
T COG5599 120 -------------------------------------------------------------------------------- 119 (302)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEE--e
Q psy10360 164 QSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKRE--V 241 (380)
Q Consensus 164 ~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~--~ 241 (380)
.+||||++..|.++++|.+|||.+. +.+..+|...+..++.+ .
T Consensus 120 --gvIVmLt~l~E~~rekc~qYWp~~~---------------------------------~~~~~~G~~v~~~~~~e~~~ 164 (302)
T COG5599 120 --GVIVMLTSLPEYNREKCDQYWPLGY---------------------------------DDTLIIGLRVIKQKKYELFN 164 (302)
T ss_pred --eEEEEecChHHHhHHHHhhhCCCCc---------------------------------CcceeeeeEEEEEecccccc
Confidence 2389999999999999999999442 33445564444444333 2
Q ss_pred ecceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHH
Q psy10360 242 REKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLA 321 (380)
Q Consensus 242 ~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~a 321 (380)
...+..+.+++.... +..+.|.||+|.+|+|.+.| +...+.+++..+... .-..+|++|||||||||||||+|
T Consensus 165 d~~~~~~~f~L~~~~-~~~k~Ihhf~y~nW~D~~~p-~i~sl~~~~~sl~~s-----p~~t~piiVHCSAGvGRTGTFIa 237 (302)
T COG5599 165 DNIVNVHNFELTSIN-GPPKKIHHFQYINWVDFNVP-DIRSLTEVIHSLNDS-----PVRTGPIIVHCSAGVGRTGTFIA 237 (302)
T ss_pred cceeeeeecccccCC-CCccEEEEEEecCccccCCc-CHHHHHHHHHHhhcC-----cCCCCCEEEEeccCCCCcceeee
Confidence 344667788887644 78899999999999999999 555555555444321 11379999999999999999999
Q ss_pred HHHHHHHHhhC--------CCCC-HHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhc
Q psy10360 322 CDILIRHFETS--------RSVD-VPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLT 373 (380)
Q Consensus 322 l~~~~~~l~~~--------~~vd-v~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~ 373 (380)
+|.++++.... -..| |+++|..||+||+.||||.+||.|||++++++.++..
T Consensus 238 lD~ll~~~~~~~~~t~~~~~t~D~if~iV~~LRsQRmkmVQn~~Qf~flY~~~~~l~~~q~ 298 (302)
T COG5599 238 LDILLRMPNDTLNHTDTWEDTQDLIFQIVLSLRSQRMKMVQNKTQFKFLYDAFLELNKSQI 298 (302)
T ss_pred HHHHHhccccccCCCchhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhh
Confidence 99999987644 1223 8899999999999999999999999999999985543
No 12
>KOG0791|consensus
Probab=100.00 E-value=7.1e-60 Score=432.54 Aligned_cols=243 Identities=34% Similarity=0.658 Sum_probs=219.8
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcE
Q psy10360 4 DELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKV 83 (380)
Q Consensus 4 ~~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~ 83 (380)
.+.++.|..||||.||+|||+|||+|.+..+. +++|||||||+.|+...+. |||||+|+|.|.++||+|||++++.+
T Consensus 116 aA~l~~n~~knr~~nilpYd~Srvkl~~~~e~--~~~DYinA~~~Pg~~s~~~-fIAtQGPlp~t~~~fW~mvwq~~~~~ 192 (374)
T KOG0791|consen 116 AALLPLNRPKNRYTNILPYDNSRVKLSPVNEE--EGSDYINASYIPGYNSPRE-FIATQGPLPETRDDFWKMVWQQKSHI 192 (374)
T ss_pred hhhcCCCCCcCCcCCCCCcccccceecccccc--chhhhhhhhhcCCCCCcce-EEEeeCCCCCChhHHHHHHHHhhcce
Confidence 46678899999999999999999999977765 6899999999999988655 89999999999999999999998888
Q ss_pred EEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhC
Q psy10360 84 ILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTH 163 (380)
Q Consensus 84 iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~ 163 (380)
T Consensus 193 -------------------------------------------------------------------------------- 192 (374)
T KOG0791|consen 193 -------------------------------------------------------------------------------- 192 (374)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEeec
Q psy10360 164 QSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVRE 243 (380)
Q Consensus 164 ~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~ 243 (380)
|||||...|.++.+|..|||..+ . ...+|+.+|...++....
T Consensus 193 ----IVmlt~~~e~~R~kc~~ywP~~~---------------------------------~-~~~~gdi~V~~v~e~~~~ 234 (374)
T KOG0791|consen 193 ----IVMLTKCNEKGRVKCDEYWPDEE---------------------------------V-PVAYGDITVTMVSEESLD 234 (374)
T ss_pred ----EEEEeecccccchhhhhhccccc---------------------------------c-cceeccEEEEEechhhcC
Confidence 67777777889999999999764 2 267899999999999999
Q ss_pred ceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHH
Q psy10360 244 KYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACD 323 (380)
Q Consensus 244 ~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~ 323 (380)
++.+|.|.+. ..+++|.++||||+.|||+|+|..+..+++|+..++...... .+|++||||+|+||||+|+|+|
T Consensus 235 ~w~ir~~~l~--~~~~sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~~~~----~~p~iVhCSAGVgRTGTFiald 308 (374)
T KOG0791|consen 235 EWTIREFRLN--YAGESRKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSLDTS----KGPTIVHCSAGVGRTGTFIALD 308 (374)
T ss_pred CceEEEEeee--cccccceeEEEEEeeccccCCCCCchhHHHHHHHHHhhcccC----CCceeEEeecccccccchHhHH
Confidence 9999999998 556779999999999999999988999999999988775432 7899999999999999999999
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhc
Q psy10360 324 ILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLT 373 (380)
Q Consensus 324 ~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~ 373 (380)
.+++++..+..+|++.+|..||.+|+.||||..||.|+|.+++.-++...
T Consensus 309 ~LLqq~~~~~~vdi~~iv~~lR~~R~~mVqte~Qyvfl~~c~~~~l~~~~ 358 (374)
T KOG0791|consen 309 RLLQQIDSEETVDIFGVVLELRSARMLMVQTEDQYVFLHQCVLESLQGKK 358 (374)
T ss_pred HHHHHhcccccccHHHHHHHhhhccccccchHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999998876543
No 13
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00 E-value=4.3e-57 Score=412.61 Aligned_cols=232 Identities=38% Similarity=0.716 Sum_probs=204.0
Q ss_pred CcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEEEEecc
Q psy10360 10 TEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITA 89 (380)
Q Consensus 10 n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~~~ 89 (380)
|++|||+.||+|||++||+|.+.++ +++|||||||+++... +.||+||+|+++|++|||+|||++++++
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~~~~----~~~yi~A~~v~~~~~~-~~~I~~q~P~~~t~~~FW~mv~~~~~~~------ 69 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNPSPG----DSDYINASYVDGYKNG-KKFIVTQAPMPDTIEDFWQMVWEQKVQI------ 69 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTTTTT----STTEESEEEEEESSST-EEEEEEES-SGGGHHHHHHHHHHTTBSE------
T ss_pred CCccCCCCCCCcCcceEEEecCCCC----ccchhhhhhhccccch-hhheeecccccccccceehheeeccccc------
Confidence 7899999999999999999954432 3579999999988754 4499999999999999999999998888
Q ss_pred ccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEE
Q psy10360 90 LFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVIL 169 (380)
Q Consensus 90 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IV 169 (380)
||
T Consensus 70 ------------------------------------------------------------------------------Iv 71 (235)
T PF00102_consen 70 ------------------------------------------------------------------------------IV 71 (235)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------ee
Confidence 78
Q ss_pred EcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEE-EEE-eecceEE
Q psy10360 170 MITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLK-KRE-VREKYVI 247 (380)
Q Consensus 170 mL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~-~~~-~~~~~~~ 247 (380)
||++..|.+...|..|||.+. +....+|.++|++. +.. ....++.
T Consensus 72 ~L~~~~e~~~~~~~~y~P~~~---------------------------------~~~~~~g~~~V~~~~~~~~~~~~~~~ 118 (235)
T PF00102_consen 72 MLCSFDESGDEKCDQYWPLKE---------------------------------GESLKFGDYTVKCKEKIEENSKHYTV 118 (235)
T ss_dssp EESBSEETTEESS--TSTSSS---------------------------------SSEEEETTEEEEEEEEEEEEESSEEE
T ss_pred ccccccccccccccccccccc---------------------------------ccccccccccccccccccccccceEE
Confidence 888888888889999999654 55788999999999 655 7889999
Q ss_pred EEEEEeecCCc-ceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHH
Q psy10360 248 SSLQIKNLETN-LWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILI 326 (380)
Q Consensus 248 ~~l~v~~~~~~-~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~ 326 (380)
+.|.+++.+.+ .++.+.||||.+|+++++|.+...+++++..+++.. ....+|++|||++|+||||+||++++++
T Consensus 119 ~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~~~~~~~~~~v~~~~----~~~~~pivVhc~~G~gRsg~f~~~~~~~ 194 (235)
T PF00102_consen 119 RKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSPESFLDFIRKVNKSK----DDPNGPIVVHCSDGVGRSGTFCAIDILI 194 (235)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSSHHHHHHHHHHHHHH----STTSSEEEEESSSSSHHHHHHHHHHHHH
T ss_pred eeccccccccccccccccceeeeeccccccccccchhhhhhhhccccc----cCCccceEeecccccccccccccchhhc
Confidence 99999997776 389999999999999999999999999999998876 2347999999999999999999999999
Q ss_pred HHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHH
Q psy10360 327 RHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNV 367 (380)
Q Consensus 327 ~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~ 367 (380)
+++..++.+|+.++++.||++|+++|++.+||.|||.++++
T Consensus 195 ~~~~~~~~~~v~~~~~~lR~~R~~~i~~~~qy~f~~~~~~e 235 (235)
T PF00102_consen 195 EQLKKEGEVDVFEIVKKLRQQRPGAIQSPEQYRFCYMAVLE 235 (235)
T ss_dssp HHHHHHSEECHHHHHHHHHTTSTTSSSSHHHHHHHHHHHHH
T ss_pred cccccccchhhHHHHHHHHhhCCCccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999986
No 14
>KOG0793|consensus
Probab=100.00 E-value=1.2e-56 Score=434.17 Aligned_cols=245 Identities=31% Similarity=0.585 Sum_probs=220.5
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcE
Q psy10360 4 DELPPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKV 83 (380)
Q Consensus 4 ~~~~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~ 83 (380)
.+-.++|..|||...++||||+||.|+..... +.+||||||+|...+.....|||||+|++.|+.|||+||||+.|.+
T Consensus 753 ~aq~e~~a~kNR~~a~LpyDhsrV~l~~~~s~--s~~dYiNAS~I~DhDPR~paYIAtQgPl~stiA~FWQmvWe~G~~v 830 (1004)
T KOG0793|consen 753 VAQREENAPKNRSLAVLPYDHSRVLLKAENSH--SHSDYINASPIMDHDPRNPAYIATQGPLPSTIADFWQMVWESGCVV 830 (1004)
T ss_pred hhcccccccccCCCCccccccceeeeccccCc--cccccccccccccCCCCccceeeccCCCchHHHHHHHHHHHcCcEE
Confidence 45568899999999999999999999876543 6899999999988777777899999999999999999999999988
Q ss_pred EEEeccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhC
Q psy10360 84 ILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTH 163 (380)
Q Consensus 84 iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~ 163 (380)
T Consensus 831 -------------------------------------------------------------------------------- 830 (1004)
T KOG0793|consen 831 -------------------------------------------------------------------------------- 830 (1004)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEe-e
Q psy10360 164 QSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREV-R 242 (380)
Q Consensus 164 ~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~-~ 242 (380)
|||||...|++...|.+|||.+. ...++.|.|.+.+++. .
T Consensus 831 ----IV~Lt~l~Engv~qc~rYWPdeG-----------------------------------selyhiyEV~LVSEHIWc 871 (1004)
T KOG0793|consen 831 ----IVMLTPLAENGVRQCYRYWPDEG-----------------------------------SELYHIYEVNLVSEHIWC 871 (1004)
T ss_pred ----EEEecChhhcchhhhhhcCCCCC-----------------------------------cceeeeEEeeeehhhhhh
Confidence 78888888999999999999753 4567888999888876 5
Q ss_pred cceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHH
Q psy10360 243 EKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLAC 322 (380)
Q Consensus 243 ~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al 322 (380)
++|.+|.|-++|.+++++|+|++|||.+||+.|+|.+...+|+|-++|++..+.. +.|||||||+|.|||||+|++
T Consensus 872 eDfLVRSFYLKNlqtseTRTvTQFHfLSWp~egvPasarslLdFRRKVNK~YRGR----ScpIiVH~sdGaGRTG~Yili 947 (1004)
T KOG0793|consen 872 EDFLVRSFYLKNLQTSETRTVTQFHFLSWPDEGVPASARSLLDFRRKVNKCYRGR----SCPIIVHCSDGAGRTGTYILI 947 (1004)
T ss_pred hhHHHHHHHHhhcccccceeeeeeeeecccccCCccchHHHHHHHHHhhhhccCC----CCceEEEccCCCCccceeeeH
Confidence 5788999999999999999999999999999999999999999999999887654 689999999999999999999
Q ss_pred HHHHHHHhhC-CCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhc
Q psy10360 323 DILIRHFETS-RSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLT 373 (380)
Q Consensus 323 ~~~~~~l~~~-~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~ 373 (380)
|+++.+|.++ +.+||..++..||.||+|||.|-+||.|++-++++=+..++
T Consensus 948 Dmvl~Rm~kGakeIDIaATlEHlRDQR~GmVaTkdQFef~l~aVAeEVnaiL 999 (1004)
T KOG0793|consen 948 DMVLNRMAKGAKEIDIAATLEHLRDQRPGMVATKDQFEFALTAVAEEVNAIL 999 (1004)
T ss_pred HHHHHHHhccchhhhHHHHHHHHhhcCCcceeehhhhHHHHHHHHHHHHHHH
Confidence 9999999876 67999999999999999999999999999999987665544
No 15
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00 E-value=2.7e-50 Score=386.17 Aligned_cols=219 Identities=16% Similarity=0.236 Sum_probs=176.4
Q ss_pred CCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCc--CCHHHHHHHHHhcCCcEEEEeccccccC
Q psy10360 17 ANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQ--NTIEDFWRMIWTHQSKVILMITALFENS 94 (380)
Q Consensus 17 ~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~--~t~~dFW~mi~~~~~~~iv~~~~~~e~~ 94 (380)
.||+|+|||||+|+ +++|||||||+ +...++ +|++|.|+. +|++|||+||||+++.+
T Consensus 305 ~~I~~~~~TrV~ls--------~g~yI~ANyI~-~~~k~~-aIa~QYP~nt~eTieDFWrMVWEn~~~V----------- 363 (535)
T PRK15375 305 SSIPINQQTQVKLS--------DGMPVPVNTLT-FDGKPV-ALAGSYPKNTPDALEAHMKMLLEKECSC----------- 363 (535)
T ss_pred cccCccccceEEcC--------CCCccccceee-ecCccc-eEeccCCCCchhhHHHHHHHHHHcCCCE-----------
Confidence 68999999999994 58999999999 777666 899999965 89999999999999888
Q ss_pred CCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCC
Q psy10360 95 GPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITAL 174 (380)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~ 174 (380)
||||+..
T Consensus 364 -------------------------------------------------------------------------IVMLT~l 370 (535)
T PRK15375 364 -------------------------------------------------------------------------LVVLTSE 370 (535)
T ss_pred -------------------------------------------------------------------------EEEeecc
Confidence 6777777
Q ss_pred ccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEee-cceEEEEEEEe
Q psy10360 175 FENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVR-EKYVISSLQIK 253 (380)
Q Consensus 175 ~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~-~~~~~~~l~v~ 253 (380)
.|.+..+|.+||+. ...||+|+|++.+.+.. ..+.++.+.+.
T Consensus 371 ~E~g~~KC~pYW~~-------------------------------------s~tYGdItVts~seesls~g~iIR~f~L~ 413 (535)
T PRK15375 371 DQMQAKQLPPYFRG-------------------------------------SYTFGEVHTNSQKVSSASQGEAIDQYNMQ 413 (535)
T ss_pred ccCcccccCccCCC-------------------------------------cceeccEEEEEEEEEeccCCceEEEEEEE
Confidence 77777889999963 23588888887777654 45667776554
Q ss_pred ecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhc----CCCCCCEEEEcCCCCChhHHHHHHHHHHHHH
Q psy10360 254 NLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAA----GREAGPLVIHCSPGTGRTGTVLACDILIRHF 329 (380)
Q Consensus 254 ~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~----~~~~~PivVHCs~GvGRtG~f~al~~~~~~l 329 (380)
-......+.|+||||++|||||+|++...++.|++.++....... ...++++|||||||+||||+|||++. +
T Consensus 414 Ik~~E~R~tV~QFHyTnWPDHGVPpST~~LleLvr~Vr~~~q~~~~~~~~~nk~~PVVHCSAGVGRTGTFIAi~l----l 489 (535)
T PRK15375 414 LSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALV----L 489 (535)
T ss_pred EecCCceeEEEEEEeCCCCCCCCCCChHHHHHHHHHHHHhhhcccccccccCCCCceEEcCCCCchHHHHHHHHH----H
Confidence 433344458999999999999999888889999888876532211 11223448999999999999999976 3
Q ss_pred hhCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHHH
Q psy10360 330 ETSRSVDVPRVVYNIRQCRAG-AVATSQQYAFIYRVLNVYAS 370 (380)
Q Consensus 330 ~~~~~vdv~~~v~~lR~qR~~-~V~t~~Qy~fiy~~l~~y~~ 370 (380)
.....+++.++|..||.+|++ |||+.+||.+++.+-+..+.
T Consensus 490 k~~~~~sle~IV~dlR~qRng~MVQt~eQy~~l~~~~~~~~~ 531 (535)
T PRK15375 490 KDNPHSNLEQVRADFRNSRNNRMLEDASQFVQLKAMQAQLLM 531 (535)
T ss_pred hccccCCHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHhh
Confidence 445679999999999999999 99999999999998877664
No 16
>KOG4228|consensus
Probab=100.00 E-value=4.3e-50 Score=410.43 Aligned_cols=206 Identities=35% Similarity=0.626 Sum_probs=192.3
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCcccccccccccee
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQ 202 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~ 202 (380)
.+++|+|+|++|+. +++.|||||||+++|++|||+||||+++.+|||++...|.++.||++|||..
T Consensus 592 ~sDYINAnyIdGy~-e~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~r~kC~qYWP~~------------- 657 (1087)
T KOG4228|consen 592 NSDYINANYIDGYK-EPNAYIAAQGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFSRVKCAQYWPEG------------- 657 (1087)
T ss_pred cccceeeeeeeccc-ccccceeccCCcccchHHHHHHheeccCCcEEEEecccccccccccccCCCC-------------
Confidence 36899999999997 4567999999999999999999999999999999999999999999999932
Q ss_pred eeeeccccccccCCCCCCcccccceeecceEEEEEEEEeecceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhH
Q psy10360 203 ITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVREKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESS 282 (380)
Q Consensus 203 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~ 282 (380)
...||++.|++...+...+|.+|+|.++..+.+..|.|+||||++|||+|+|..+..
T Consensus 658 -----------------------t~~yGdi~V~~~~~~~~a~y~iRtf~l~~~g~~~~R~v~qfhFt~Wpd~gvPe~~t~ 714 (1087)
T KOG4228|consen 658 -----------------------TETYGDIKVTLVQTKPLAEYGIRTFALKKQGENPKREVRQFHFTAWPDHGVPETPTG 714 (1087)
T ss_pred -----------------------ccccccccccceeeeeeccceEEeeeccccCCCCCceeeeeeeccCCCCCCcccchH
Confidence 457899999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHH
Q psy10360 283 LIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIY 362 (380)
Q Consensus 283 ~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy 362 (380)
+|.|++.++... ....||+|||||||+||||+|+++|.++++++.++.+|++..|+.||.||..||||.+||.|||
T Consensus 715 lL~f~rrvk~~~----p~~aGPiVVHCSAGvGRTG~fi~iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi~ 790 (1087)
T KOG4228|consen 715 LLKFRRRVKTFN----PPDAGPIVVHCSAGVGRTGCFIVIDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFIH 790 (1087)
T ss_pred HHHHHHHhccCC----CcCCCCEEEECCCCCCCcceEEEeHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHHH
Confidence 999998887653 2236999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy10360 363 RVLNVYA 369 (380)
Q Consensus 363 ~~l~~y~ 369 (380)
++|+++.
T Consensus 791 ~AllE~~ 797 (1087)
T KOG4228|consen 791 EALLEAC 797 (1087)
T ss_pred HHHHHHH
Confidence 9999876
No 17
>KOG0789|consensus
Probab=100.00 E-value=3.5e-48 Score=383.15 Aligned_cols=244 Identities=29% Similarity=0.493 Sum_probs=186.4
Q ss_pred CCCCcCCCCCCCCCCCCCCeeEecCCCCCCCCCCCceeecccCCCCCCCceEEEeCCCCcCCHHHHHHHHHhcCCcEEEE
Q psy10360 7 PPGTEDKNRYANVIPIPETRVRLCSGGEAASDSEDYINANYVRGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILM 86 (380)
Q Consensus 7 ~~~n~~kNR~~~i~p~d~sRV~L~~~~~~~~~~~~YINAs~v~~~~~~~~~~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~ 86 (380)
...|..||||.||.|||++||+|.... .+||||||||+++... +.||+||+|++.|..|||+|||++++.+
T Consensus 124 ~~~~~~kNr~~dv~~~d~~rV~l~~~~-----~~dyI~A~~v~~~~~~-~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~--- 194 (415)
T KOG0789|consen 124 FLKNMDKNRYSDVQCLDHTRVKLKPPQ-----DKDYIHASKIYFPKGP-RTAILTQAPLSKTTEDFWRMVFEEKVES--- 194 (415)
T ss_pred hhccccccccCCcCcccCCeeecCCCC-----CcccchhhccCCcCCC-cCceecCCCCcccHHHHHHHHHHcCCCE---
Confidence 456778999999999999999997532 5799999999998744 4499999999999889999999998877
Q ss_pred eccccccCCCccccceeecccCCCccceeeeeccccccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCc
Q psy10360 87 ITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAMKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSK 166 (380)
Q Consensus 87 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~ 166 (380)
T Consensus 195 -------------------------------------------------------------------------------- 194 (415)
T KOG0789|consen 195 -------------------------------------------------------------------------------- 194 (415)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCCCcccccceeecceEEEEEEEEee---c
Q psy10360 167 VILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKKREVR---E 243 (380)
Q Consensus 167 ~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~~~~~---~ 243 (380)
|||||...|.+..+|.+|||...+ ....|+.+.. ..+........ .
T Consensus 195 -Ivml~~~~E~~~~kc~~Y~P~~~~--~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~ 243 (415)
T KOG0789|consen 195 -VVLLCSDEELGAAECASYFPSKRG--VKLTFLEFGK----------------------------KFVENRKVEMKQQDQ 243 (415)
T ss_pred -EEEecchhhccHHHHhhcCcccCC--Ceeeecccce----------------------------eEEEeeeeecccccc
Confidence 888999899999999999998751 1111222211 11222222221 2
Q ss_pred ceEEEE-EEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHH
Q psy10360 244 KYVISS-LQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLAC 322 (380)
Q Consensus 244 ~~~~~~-l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al 322 (380)
.+.... +.+...+...++.+.|+||.+|||+++|.+...++.++.. .... ..+..+|++||||+|+||||+|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~~~p~~~~~~l~~~~~-~~~~---~~~~~~P~vVhcsaG~gRtgt~v~~ 319 (415)
T KOG0789|consen 244 TSTVGLLLLVLPEGLEISSSVVHYHYINWPDHGAPDSVKSILPLLRQ-SVLE---LRPKQEPIEVHCSAGAGRAGTLVLI 319 (415)
T ss_pred cceeeEEEeecCCCccccceEEEEeeCCCccccCCcchHHHHHHHHh-hhhh---hcCCCCCeEEECCCCCCccchHHHH
Confidence 222222 2222233334579999999999999999989999888865 1111 1123689999999999999999999
Q ss_pred HHHHHHHhh-CCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcC
Q psy10360 323 DILIRHFET-SRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLTG 374 (380)
Q Consensus 323 ~~~~~~l~~-~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~ 374 (380)
++++.++.. ....++..++..+|.||.++||+..||.|+|++++.|+.++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~~Qy~f~~~~~~~~~~~~~~ 372 (415)
T KOG0789|consen 320 EHALIELQGPEGEPPIDEILREIRYQRPGAVQSPLQYLFIYAATLKYIKKVSY 372 (415)
T ss_pred HHHHHHHhcCCCCccHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHccC
Confidence 988888854 4567899999999999999999999999999999999997543
No 18
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.90 E-value=2.5e-23 Score=165.42 Aligned_cols=103 Identities=41% Similarity=0.793 Sum_probs=93.6
Q ss_pred EEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhC-CCCCHHHHH
Q psy10360 263 LTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETS-RSVDVPRVV 341 (380)
Q Consensus 263 v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~-~~vdv~~~v 341 (380)
+.||+|.+||++++|.....+++++..+++..... ...+|++|||++|+||||+||++++++.++..+ ..+++.+++
T Consensus 2 ~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~--~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (105)
T smart00404 2 VKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQS--SSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTV 79 (105)
T ss_pred eEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhc--CCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 68999999999999998899999999988765432 236899999999999999999999999999888 789999999
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHH
Q psy10360 342 YNIRQCRAGAVATSQQYAFIYRVLNV 367 (380)
Q Consensus 342 ~~lR~qR~~~V~t~~Qy~fiy~~l~~ 367 (380)
..+|.+|++++++.+||.|+|+++++
T Consensus 80 ~~ir~~r~~~~~~~~q~~~~~~~~~~ 105 (105)
T smart00404 80 KELRKQRPGMVQTFEQYLFLYRALLE 105 (105)
T ss_pred HHHHhhhhhhCCcHHHHHHHHHHHhC
Confidence 99999999999999999999998863
No 19
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.90 E-value=2.5e-23 Score=165.42 Aligned_cols=103 Identities=41% Similarity=0.793 Sum_probs=93.6
Q ss_pred EEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhC-CCCCHHHHH
Q psy10360 263 LTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETS-RSVDVPRVV 341 (380)
Q Consensus 263 v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~-~~vdv~~~v 341 (380)
+.||+|.+||++++|.....+++++..+++..... ...+|++|||++|+||||+||++++++.++..+ ..+++.+++
T Consensus 2 ~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~--~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (105)
T smart00012 2 VKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQS--SSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTV 79 (105)
T ss_pred eEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhc--CCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 68999999999999998899999999988765432 236899999999999999999999999999888 789999999
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHH
Q psy10360 342 YNIRQCRAGAVATSQQYAFIYRVLNV 367 (380)
Q Consensus 342 ~~lR~qR~~~V~t~~Qy~fiy~~l~~ 367 (380)
..+|.+|++++++.+||.|+|+++++
T Consensus 80 ~~ir~~r~~~~~~~~q~~~~~~~~~~ 105 (105)
T smart00012 80 KELRKQRPGMVQTFEQYLFLYRALLE 105 (105)
T ss_pred HHHHhhhhhhCCcHHHHHHHHHHHhC
Confidence 99999999999999999999998863
No 20
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=99.68 E-value=4.5e-16 Score=133.89 Aligned_cols=138 Identities=15% Similarity=0.262 Sum_probs=96.8
Q ss_pred ceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCCC
Q psy10360 140 KFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLPP 219 (380)
Q Consensus 140 ~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 219 (380)
-+||++.+|++++.++|...+-+.++..||.++.. +++.+.
T Consensus 16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~----------~~~~~~----------------------------- 56 (166)
T PTZ00242 16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCGP----------TYDAEL----------------------------- 56 (166)
T ss_pred eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCCC----------CCCHHH-----------------------------
Confidence 47999999999999999999999999999999642 111110
Q ss_pred CcccccceeecceEEEEEEEEeecceEEEEEEEeecCCcceEEEEEEEeCCCC--CCCCCCChhHHHHHHHHHHHHhhhh
Q psy10360 220 SEVLDCHRVFGDFQITLKKREVREKYVISSLQIKNLETNLWRELTHVWYTNWP--TTGVPNEESSLIAFLIEARAHMKGA 297 (380)
Q Consensus 220 ~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wp--d~~vP~~~~~~l~~i~~v~~~~~~~ 297 (380)
....+++|..|| |.++| +...+.+++..+.......
T Consensus 57 -----------------------------------------~~~~gi~~~~~p~~D~~~P-~~~~i~~~~~~i~~~~~~~ 94 (166)
T PTZ00242 57 -----------------------------------------LEKNGIEVHDWPFDDGAPP-PKAVIDNWLRLLDQEFAKQ 94 (166)
T ss_pred -----------------------------------------HHHCCCEEEecCCCCCCCC-CHHHHHHHHHHHHHHHHhh
Confidence 001123344455 55544 4543434443333322211
Q ss_pred cCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHH
Q psy10360 298 AGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVL 365 (380)
Q Consensus 298 ~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l 365 (380)
....+||+|||.+|+||||+||++..+ +. +.+++.+++..+|++|++++ +..|+.|+.+..
T Consensus 95 -~~~g~~V~VHC~aGigRSgt~~a~yL~----~~-~~~s~~eAi~~vr~~R~~~i-~~~Q~~~l~~~~ 155 (166)
T PTZ00242 95 -STPPETIAVHCVAGLGRAPILVALALV----EY-GGMEPLDAVGFVREKRKGAI-NQTQLQFLKKYK 155 (166)
T ss_pred -ccCCCeEEEECCCCCCHHHHHHHHHHH----Hh-CCCCHHHHHHHHHHHCCCCc-hHHHHHHHHHHH
Confidence 123789999999999999999998743 22 35799999999999999999 589999986644
No 21
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=99.52 E-value=1.4e-13 Score=122.57 Aligned_cols=136 Identities=15% Similarity=0.244 Sum_probs=96.8
Q ss_pred CcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCC
Q psy10360 138 EEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYL 217 (380)
Q Consensus 138 ~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 217 (380)
..-+||++.+|+..++.+|..-+.+.++..||.+|... | +...
T Consensus 90 ~~~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE~~---------Y-d~~~--------------------------- 132 (241)
T PTZ00393 90 GKIKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCERT---------Y-NDGE--------------------------- 132 (241)
T ss_pred CceeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCCCC---------C-CHHH---------------------------
Confidence 34599999999999999999999999999999997521 1 1110
Q ss_pred CCCcccccceeecceEEEEEEEEeecceEEEEEEEeecCCcceEEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhh
Q psy10360 218 PPSEVLDCHRVFGDFQITLKKREVREKYVISSLQIKNLETNLWRELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGA 297 (380)
Q Consensus 218 ~~~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~ 297 (380)
+. + .-+.+ +...|||+++|+. ..+-+++..+.....
T Consensus 133 -----------~~-------------------------~----~GI~~-~~lpipDg~aPs~-~~i~~~l~~i~~~l~-- 168 (241)
T PTZ00393 133 -----------IT-------------------------S----AGINV-HELIFPDGDAPTV-DIVSNWLTIVNNVIK-- 168 (241)
T ss_pred -----------HH-------------------------H----cCCeE-EEeecCCCCCCCH-HHHHHHHHHHHHHHh--
Confidence 00 0 11111 2246889888853 333333333332221
Q ss_pred cCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHH
Q psy10360 298 AGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRV 364 (380)
Q Consensus 298 ~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~ 364 (380)
..++|+|||.+|+||||+++|+.++ + .-++..+++..+|+.|++++ +..|+.|+.+.
T Consensus 169 ---~g~~VaVHC~AGlGRTGtl~AayLI-~-----~GmspeeAI~~VR~~RPgAI-n~~Q~~fL~~y 225 (241)
T PTZ00393 169 ---NNRAVAVHCVAGLGRAPVLASIVLI-E-----FGMDPIDAIVFIRDRRKGAI-NKRQLQFLKAY 225 (241)
T ss_pred ---cCCeEEEECCCCCCHHHHHHHHHHH-H-----cCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHH
Confidence 2679999999999999999987654 2 24799999999999999998 57899987654
No 22
>KOG2836|consensus
Probab=99.25 E-value=1.6e-10 Score=92.30 Aligned_cols=133 Identities=18% Similarity=0.361 Sum_probs=94.7
Q ss_pred cceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCccccccccccceeeeeeccccccccCCCC
Q psy10360 139 EKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQITLKKREVEKCADYLP 218 (380)
Q Consensus 139 ~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 218 (380)
+-+|++|.-|...|+.+|-.-+.++++..+|-.|+..=+. -|.++
T Consensus 16 ~MrFLIThnPtnaTln~fieELkKygvttvVRVCe~TYdt-------~~lek---------------------------- 60 (173)
T KOG2836|consen 16 NMRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEPTYDT-------TPLEK---------------------------- 60 (173)
T ss_pred ceEEEEecCCCchhHHHHHHHHHhcCCeEEEEecccccCC-------chhhh----------------------------
Confidence 4589999999999999999999999999999998643110 01000
Q ss_pred CCcccccceeecceEEEEEEEEeecceEEEEEEEeecCCcceEEEEEEEeCCCC-CCCCCCChhHHHHHHHHHHHHhhhh
Q psy10360 219 PSEVLDCHRVFGDFQITLKKREVREKYVISSLQIKNLETNLWRELTHVWYTNWP-TTGVPNEESSLIAFLIEARAHMKGA 297 (380)
Q Consensus 219 ~~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~h~~y~~Wp-d~~vP~~~~~~l~~i~~v~~~~~~~ 297 (380)
. -++..+|+ +.|.|+...-+-+.+..+....+.
T Consensus 61 --------------------------------------~-------GI~Vldw~f~dg~ppp~qvv~~w~~l~~~~f~e- 94 (173)
T KOG2836|consen 61 --------------------------------------E-------GITVLDWPFDDGAPPPNQVVDDWLSLVKTKFRE- 94 (173)
T ss_pred --------------------------------------c-------CceEeecccccCCCCchHHHHHHHHHHHHHHhh-
Confidence 0 02234688 677876554433333333333332
Q ss_pred cCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHH
Q psy10360 298 AGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFI 361 (380)
Q Consensus 298 ~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fi 361 (380)
.+..-|-|||-+|+||+-+++|+..+ +.-....+.|..+|++|.|++. ..|+.|+
T Consensus 95 --~p~~cvavhcvaglgrapvlvalali------e~gmkyedave~ir~krrga~n-~kql~~l 149 (173)
T KOG2836|consen 95 --EPGCCVAVHCVAGLGRAPVLVALALI------EAGMKYEDAVEMIRQKRRGAIN-SKQLLYL 149 (173)
T ss_pred --CCCCeEEEEeecccCcchHHHHHHHH------HccccHHHHHHHHHHHhhcccc-HHHHHHH
Confidence 34678999999999999999988765 3456788999999999999984 5676665
No 23
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=99.23 E-value=1.9e-10 Score=96.00 Aligned_cols=89 Identities=13% Similarity=0.229 Sum_probs=65.1
Q ss_pred EEEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHH
Q psy10360 261 RELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRV 340 (380)
Q Consensus 261 ~~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~ 340 (380)
....|+.+.+|++...+.....+++++..... .++||+|||.+|.||||+++++..+..+ ..++.++
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~~~~i~~~~~--------~~~~vlVHC~~G~~Rs~~~~~~~l~~~~-----~~~~~~a 114 (139)
T cd00127 48 FNYLYVPILDLPSQDISKYFDEAVDFIDDARE--------KGGKVLVHCLAGVSRSATLVIAYLMKTL-----GLSLREA 114 (139)
T ss_pred ceEEEEEceeCCCCChHHHHHHHHHHHHHHHh--------cCCcEEEECCCCCchhHHHHHHHHHHHc-----CCCHHHH
Confidence 34567777778754443333445555544432 1679999999999999999987655433 5799999
Q ss_pred HHHHHHhcCCCCCChhHHHHHH
Q psy10360 341 VYNIRQCRAGAVATSQQYAFIY 362 (380)
Q Consensus 341 v~~lR~qR~~~V~t~~Qy~fiy 362 (380)
+..+|++|+.+..+..+...+-
T Consensus 115 ~~~vr~~r~~~~~~~~~~~~l~ 136 (139)
T cd00127 115 YEFVKSRRPIISPNAGFMRQLK 136 (139)
T ss_pred HHHHHHHCCccCCCHHHHHHHH
Confidence 9999999999988888776653
No 24
>KOG1720|consensus
Probab=99.21 E-value=1.2e-10 Score=100.50 Aligned_cols=84 Identities=26% Similarity=0.527 Sum_probs=69.2
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCC
Q psy10360 271 WPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAG 350 (380)
Q Consensus 271 Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~ 350 (380)
.+|.+.| ++..+.+|+..+....+ .+-|.|||-+|.||||+++|+.++.. -.+.-.+++..||..|||
T Consensus 123 f~Dg~tP-~~~~v~~fv~i~e~~~~------~g~iaVHCkaGlGRTG~liAc~lmy~-----~g~ta~eaI~~lR~~RpG 190 (225)
T KOG1720|consen 123 FADGSTP-TDAIVKEFVKIVENAEK------GGKIAVHCKAGLGRTGTLIACYLMYE-----YGMTAGEAIAWLRICRPG 190 (225)
T ss_pred cCCCCCC-CHHHHHHHHHHHHHHHh------cCeEEEEeccCCCchhHHHHHHHHHH-----hCCCHHHHHHHHHhcCCc
Confidence 3555555 67888888887765533 58999999999999999999887655 367889999999999999
Q ss_pred CCCChhHHHHHHHHHH
Q psy10360 351 AVATSQQYAFIYRVLN 366 (380)
Q Consensus 351 ~V~t~~Qy~fiy~~l~ 366 (380)
||++++|+..+++--.
T Consensus 191 ~V~gpqQ~~l~~~q~~ 206 (225)
T KOG1720|consen 191 AVIGPQQHKLLHKQRD 206 (225)
T ss_pred cccCHHHHHHHHHHHH
Confidence 9999999999888554
No 25
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=99.16 E-value=3.6e-11 Score=113.06 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=36.5
Q ss_pred cceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 124 QSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 124 ~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
..+|||+|++|+..+ ++|||||+|+++|++|||+|||+++
T Consensus 76 ~~YINAnyVdG~~~~-~~fIaTQ~Pl~~T~~dFW~MVwe~~ 115 (298)
T PHA02740 76 EKVLDARFVDGYDFE-QKFICIINLCEDACDKFLQALSDNK 115 (298)
T ss_pred CCcEEEEEecCCCCC-CcEEEecCCchhhHHHHHHHHHhcC
Confidence 479999999999765 6799999999999999999999886
No 26
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=99.13 E-value=3.2e-10 Score=107.19 Aligned_cols=41 Identities=34% Similarity=0.637 Sum_probs=37.0
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
...+|||+|++|+.. ++.|||||+|+++|++|||+|||+++
T Consensus 77 ~~dYINAsyI~g~~~-~~~fIatQ~Pl~~T~~dFW~MVw~~~ 117 (303)
T PHA02742 77 GDDFINASYVDGHNA-KGRFICTQAPLEETALDFWQAIFQDQ 117 (303)
T ss_pred CCCcEEEeeecCCCC-CCeEEEECCCCcccHHHHHHHHhhcC
Confidence 368999999999975 46899999999999999999999875
No 27
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=98.96 E-value=5.2e-10 Score=106.20 Aligned_cols=41 Identities=32% Similarity=0.725 Sum_probs=37.3
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
...+|||+|++|+.. +++|||||+|+++|++|||+|||+++
T Consensus 77 ~~dYINAsyV~g~~~-~~~yIaTQ~Pl~~T~~dFW~MVwe~~ 117 (312)
T PHA02747 77 TSDYIHANWIDGFED-DKKFIATQGPFAETCADFWKAVWQEH 117 (312)
T ss_pred CCCcEEeeeecCCCC-CCeEEEeCCCcchhHHHHHHHHHhcc
Confidence 468999999999875 56899999999999999999999986
No 28
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=98.91 E-value=9.1e-10 Score=104.97 Aligned_cols=41 Identities=34% Similarity=0.604 Sum_probs=36.8
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
.+.+|||+|++|+.. +++|||||+|+++|++|||+|||+++
T Consensus 97 ~~dYINAsyV~g~~~-~~~fIaTQ~Pl~~T~~dFW~MIwe~~ 137 (323)
T PHA02746 97 AENYIHANFVDGFKE-ANKFICAQGPKEDTSEDFFKLISEHE 137 (323)
T ss_pred CCCeEEEecccCCCC-CCeEEEeCCCChhhHHHHHHHHHhhC
Confidence 368999999999865 46799999999999999999999875
No 29
>PHA02738 hypothetical protein; Provisional
Probab=98.90 E-value=9.5e-10 Score=104.72 Aligned_cols=41 Identities=34% Similarity=0.605 Sum_probs=36.9
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
...+|||+|++|+..+ ++|||||+|+++|++|||+|||+++
T Consensus 74 ~~dYINAsyVdg~~~~-~kfI~TQ~Pl~~T~~dFW~MVwe~~ 114 (320)
T PHA02738 74 RGDYINANYVDGFEYK-KKFICGQAPTRQTCYDFYRMLWMEH 114 (320)
T ss_pred CCCceEeEEecCCCCC-ceeEEecCCChHHHHHHHHHHHHhC
Confidence 3689999999999754 6899999999999999999999974
No 30
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.90 E-value=1.1e-08 Score=89.44 Aligned_cols=93 Identities=23% Similarity=0.251 Sum_probs=66.9
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhc
Q psy10360 269 TNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCR 348 (380)
Q Consensus 269 ~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR 348 (380)
..++|+..|+. ..+-+++..+..... ..+.|+|||..|+||||+++|+..++.. +-....+.+.-+|..|
T Consensus 78 ~~~~D~~~p~~-~~l~~~v~~i~~~~~-----~g~kVvVHC~~GigRSgtviaA~lm~~~----~~~~~~~~i~~~~~~r 147 (180)
T COG2453 78 LPILDGTVPDL-EDLDKIVDFIEEALS-----KGKKVVVHCQGGIGRSGTVIAAYLMLYG----GLSLADEAIAVKRRRR 147 (180)
T ss_pred eeecCCCCCcH-HHHHHHHHHHHHHHh-----cCCeEEEEcCCCCchHHHHHHHHHHHHc----CCCCHHHHHHHHHhcC
Confidence 35678888743 333333333322222 1459999999999999999997776543 5667788888899999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHH
Q psy10360 349 AGAVATSQQYAFIYRVLNVYASK 371 (380)
Q Consensus 349 ~~~V~t~~Qy~fiy~~l~~y~~~ 371 (380)
++++.+..|+.|...........
T Consensus 148 ~~~v~~~~q~~~~~e~~~~~~~~ 170 (180)
T COG2453 148 PGAVVTEIQHLFELEQELFRKKE 170 (180)
T ss_pred CcccccHHHHHHHHHHHHHHhhc
Confidence 99999999999998877655433
No 31
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.78 E-value=5.2e-09 Score=93.35 Aligned_cols=38 Identities=42% Similarity=0.933 Sum_probs=34.3
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTH 163 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~ 163 (380)
...+|+|+|++-+.++ |||||+|+++|+++||+|||++
T Consensus 78 ~~DYINAS~ik~~~~~---yIAtQgP~~~t~ddFW~mvw~n 115 (302)
T COG5599 78 INDYINASYIKTPRGK---YIATQGPKPETIDDFWKMVWHN 115 (302)
T ss_pred hhhcccceeeecCCCc---eEEecCCCCchHHHHHHHHHhc
Confidence 4588999999988754 9999999999999999999976
No 32
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=98.78 E-value=8.7e-08 Score=79.95 Aligned_cols=56 Identities=14% Similarity=0.291 Sum_probs=47.7
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIY 362 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy 362 (380)
.+||+|||.+|.||||+++++..+.. ...++.+++..+|+.|+.+..+..|..-+.
T Consensus 78 ~~~VlVHC~~G~~RS~~v~~~yl~~~-----~~~~~~~A~~~v~~~R~~~~p~~~~~~qL~ 133 (138)
T smart00195 78 GGKVLVHCQAGVSRSATLIIAYLMKY-----RNLSLNDAYDFVKDRRPIISPNFGFLRQLI 133 (138)
T ss_pred CCeEEEECCCCCchHHHHHHHHHHHH-----hCCCHHHHHHHHHHHCCccCCCHhHHHHHH
Confidence 68999999999999999998775433 247999999999999999999988876553
No 33
>KOG0792|consensus
Probab=98.72 E-value=2.8e-08 Score=103.30 Aligned_cols=100 Identities=27% Similarity=0.425 Sum_probs=65.7
Q ss_pred EEEeCCCCcCCHHHHHHHHHhcCCcEEEEeccccccCCCccccceeecccCCCccceeeeecccc---ccceEEeEeecC
Q psy10360 58 YIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSGPKGEEKFYIACQAPLQNTIEDFYFGAM---KQSLIFAEFSTG 134 (380)
Q Consensus 58 ~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~a~~~~~ 134 (380)
-|+.|+=..+++-.=..+|..++...+.....+.|+...+-.++.- |..-| ..-..+. ...+|+|+++.-
T Consensus 859 ~~L~~~L~~g~v~~efE~i~rkkp~~~~~~a~lpeN~~KNRyrdvl-----PYD~t--RV~L~~~~~~nagYINAS~i~i 931 (1144)
T KOG0792|consen 859 IILAQGLEDGMVFTEFEQIYRKKPGMACSIARLPENAPKNRYRDVL-----PYDDT--RVELQPSKDNNAGYINASHIEI 931 (1144)
T ss_pred HHHHhhhhcCchHHHHHHHhhhCCCceeeeccccccccccccCCcC-----CCcCc--eeeeccCCCCCcccccceeeEe
Confidence 4566666677777778888898877665555554443322111100 00000 0000111 357899999988
Q ss_pred C-CCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 135 P-KGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 135 ~-~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
+ .|.+.+|||||+|++.|+.|||+||||++
T Consensus 932 pvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~ 962 (1144)
T KOG0792|consen 932 PVGGIENRYIACQGPLPHTCTDFWQMVWEQG 962 (1144)
T ss_pred eecceeEEEEEecCCCcchHHHHHHHHHhcC
Confidence 7 67788999999999999999999999997
No 34
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=98.71 E-value=9e-09 Score=95.36 Aligned_cols=41 Identities=46% Similarity=0.921 Sum_probs=36.7
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
...+|||+|++|+. .++.||+||+|+++|++|||+|||+++
T Consensus 53 ~~~YInAs~v~~~~-~~~~fI~tQ~P~~~t~~dFW~mv~~~~ 93 (258)
T smart00194 53 GSDYINASYIDGPN-GPKAYIATQGPLPSTVEDFWRMVWEEK 93 (258)
T ss_pred CCCceeeeeEecCC-CccceEEeCCCchHHHHHHHHHHHhcC
Confidence 35789999999996 457899999999999999999999985
No 35
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=98.71 E-value=1e-08 Score=93.31 Aligned_cols=41 Identities=46% Similarity=0.858 Sum_probs=37.7
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
...+|||++++|+.. ++.||+||+|+++|+++||+|||+++
T Consensus 25 ~~~yinA~~v~~~~~-~~~fI~tQ~P~~~t~~~FW~mv~~~~ 65 (231)
T cd00047 25 GSDYINASYIDGYNP-PKAYIATQGPLPNTVEDFWRMVWEQK 65 (231)
T ss_pred CCCcEEeeeEecCCC-CcceEEcCCCChhhHHHHHHHHHhcC
Confidence 467899999999986 57899999999999999999999986
No 36
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=98.68 E-value=9.2e-08 Score=79.18 Aligned_cols=57 Identities=19% Similarity=0.440 Sum_probs=48.4
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYR 363 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~ 363 (380)
+++|+|||.+|+||||+++++..+.. ...++.+.+..+|+.|+.+..+..|+..++.
T Consensus 73 ~~~VlVHC~~G~~RS~~v~~ayLm~~-----~~~~~~~A~~~v~~~rp~~~~~~~~~~~L~~ 129 (133)
T PF00782_consen 73 GGKVLVHCKAGLSRSGAVAAAYLMKK-----NGMSLEEAIEYVRSRRPQINPNPSFIRQLYE 129 (133)
T ss_dssp TSEEEEEESSSSSHHHHHHHHHHHHH-----HTSSHHHHHHHHHHHSTTSTHHHHHHHHHHH
T ss_pred cceeEEEeCCCcccchHHHHHHHHHH-----cCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
Confidence 78999999999999999998766433 2469999999999999999988888876654
No 37
>KOG0793|consensus
Probab=98.59 E-value=2.4e-08 Score=99.26 Aligned_cols=49 Identities=33% Similarity=0.562 Sum_probs=43.8
Q ss_pred cccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCC
Q psy10360 122 MKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITA 173 (380)
Q Consensus 122 ~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~ 173 (380)
..+.+|||++|..-+.+.-.|||||+|++.|+.+||+|||+++ .|++..
T Consensus 785 s~~dYiNAS~I~DhDPR~paYIAtQgPl~stiA~FWQmvWe~G---~~vIV~ 833 (1004)
T KOG0793|consen 785 SHSDYINASPIMDHDPRNPAYIATQGPLPSTIADFWQMVWESG---CVVIVM 833 (1004)
T ss_pred cccccccccccccCCCCccceeeccCCCchHHHHHHHHHHHcC---cEEEEE
Confidence 3468899999999999999999999999999999999999997 666643
No 38
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=98.51 E-value=7.2e-08 Score=87.55 Aligned_cols=40 Identities=43% Similarity=0.857 Sum_probs=35.9
Q ss_pred cceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 124 QSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 124 ~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
..+|||+|++++. ..+.||++|+|+++|+++||+|||+++
T Consensus 27 ~~yi~A~~v~~~~-~~~~~I~~q~P~~~t~~~FW~mv~~~~ 66 (235)
T PF00102_consen 27 SDYINASYVDGYK-NGKKFIVTQAPMPDTIEDFWQMVWEQK 66 (235)
T ss_dssp TTEESEEEEEESS-STEEEEEEES-SGGGHHHHHHHHHHTT
T ss_pred cchhhhhhhcccc-chhhheeecccccccccceehheeecc
Confidence 3589999999987 689999999999999999999999985
No 39
>PRK12361 hypothetical protein; Provisional
Probab=98.17 E-value=1.2e-05 Score=82.44 Aligned_cols=81 Identities=25% Similarity=0.343 Sum_probs=59.3
Q ss_pred CCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCC
Q psy10360 273 TTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAV 352 (380)
Q Consensus 273 d~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V 352 (380)
|+..| +.+.+-+.+..+.+..+ ..++|+|||.+|.|||++++++..+ ......++.+++..+|+.|+.+.
T Consensus 152 D~~~p-~~~~l~~a~~~i~~~~~-----~~~~VlVHC~~G~sRSa~vv~ayLm----~~~~~~~~~eA~~~vr~~Rp~v~ 221 (547)
T PRK12361 152 DHSVP-TLAQLNQAINWIHRQVR-----ANKSVVVHCALGRGRSVLVLAAYLL----CKDPDLTVEEVLQQIKQIRKTAR 221 (547)
T ss_pred CCCCC-cHHHHHHHHHHHHHHHH-----CCCeEEEECCCCCCcHHHHHHHHHH----HhccCCCHHHHHHHHHHHCCCCC
Confidence 55555 44554444444433322 2689999999999999999987643 23346899999999999999999
Q ss_pred CChhHHHHHHH
Q psy10360 353 ATSQQYAFIYR 363 (380)
Q Consensus 353 ~t~~Qy~fiy~ 363 (380)
.+..|...+-.
T Consensus 222 ~n~~q~~~l~~ 232 (547)
T PRK12361 222 LNKRQLRALEK 232 (547)
T ss_pred CCHHHHHHHHH
Confidence 99999876543
No 40
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=98.16 E-value=1.1e-06 Score=86.30 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=43.7
Q ss_pred cceEEeEeecCCCCCcceEEEecCCCC--CcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCC
Q psy10360 124 QSLIFAEFSTGPKGEEKFYIACQAPLQ--NTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLP 187 (380)
Q Consensus 124 ~~~i~a~~~~~~~~~~~~yI~tQ~Pl~--~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP 187 (380)
.++|+|+|++ +.++++ +|++|+|+. +|++|||+|||+++ +-++.-.......+|..|||
T Consensus 320 g~yI~ANyI~-~~~k~~-aIa~QYP~nt~eTieDFWrMVWEn~---~~VIVMLT~l~E~g~~KC~p 380 (535)
T PRK15375 320 GMPVPVNTLT-FDGKPV-ALAGSYPKNTPDALEAHMKMLLEKE---CSCLVVLTSEDQMQAKQLPP 380 (535)
T ss_pred CCccccceee-ecCccc-eEeccCCCCchhhHHHHHHHHHHcC---CCEEEEeeccccCcccccCc
Confidence 5789999999 665554 999999975 89999999999997 55555454444444444444
No 41
>KOG0789|consensus
Probab=98.12 E-value=1.3e-06 Score=86.41 Aligned_cols=82 Identities=29% Similarity=0.504 Sum_probs=59.9
Q ss_pred ccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCCcccccccCCCCcccccccccccee
Q psy10360 123 KQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSVEKCADYLPPSEVLDCHRVFGDFQ 202 (380)
Q Consensus 123 ~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~~~kc~~YwP~~~~~~~~~~~g~~~ 202 (380)
...+|||+++.++.+. +.||+||+|++.|.+|||+|||+++ +-.+.-+..
T Consensus 151 ~~dyI~A~~v~~~~~~-~~~I~tQ~Pl~~t~~dFW~mv~~~k---~~~Ivml~~-------------------------- 200 (415)
T KOG0789|consen 151 DKDYIHASKIYFPKGP-RTAILTQAPLSKTTEDFWRMVFEEK---VESVVLLCS-------------------------- 200 (415)
T ss_pred CcccchhhccCCcCCC-cCceecCCCCcccHHHHHHHHHHcC---CCEEEEecc--------------------------
Confidence 3578999999999877 9999999999999899999999998 322221111
Q ss_pred eeeeccccccccCCCCCCcccccceeecceEEEEEE
Q psy10360 203 ITLKKREVEKCADYLPPSEVLDCHRVFGDFQITLKK 238 (380)
Q Consensus 203 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~ 238 (380)
..+.+..+|..|||... +....++.+...+..
T Consensus 201 --~~E~~~~kc~~Y~P~~~--~~~~~~~~~~~~~~~ 232 (415)
T KOG0789|consen 201 --DEELGAAECASYFPSKR--GVKLTFLEFGKKFVE 232 (415)
T ss_pred --hhhccHHHHhhcCcccC--CCeeeecccceeEEE
Confidence 12234578999999875 245566666555443
No 42
>KOG0791|consensus
Probab=98.06 E-value=1.7e-06 Score=80.97 Aligned_cols=42 Identities=33% Similarity=0.710 Sum_probs=36.5
Q ss_pred cccceEEeEeecCCCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 122 MKQSLIFAEFSTGPKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 122 ~~~~~i~a~~~~~~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
..+.+|+|+|+.|.. ..+.|||+|+|+++|.++||+|||+++
T Consensus 148 ~~~DYinA~~~Pg~~-s~~~fIAtQGPlp~t~~~fW~mvwq~~ 189 (374)
T KOG0791|consen 148 EGSDYINASYIPGYN-SPREFIATQGPLPETRDDFWKMVWQQK 189 (374)
T ss_pred chhhhhhhhhcCCCC-CcceEEEeeCCCCCChhHHHHHHHHhh
Confidence 457889999999864 456899999999999999999999843
No 43
>KOG0790|consensus
Probab=97.95 E-value=3e-06 Score=80.80 Aligned_cols=45 Identities=38% Similarity=0.612 Sum_probs=36.5
Q ss_pred cccccceEEeEeecC-------CCCCcceEEEecCCCCCcHHHHHHHHHhCC
Q psy10360 120 GAMKQSLIFAEFSTG-------PKGEEKFYIACQAPLQNTIEDFWRMIWTHQ 164 (380)
Q Consensus 120 ~~~~~~~i~a~~~~~-------~~~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~ 164 (380)
+...+.+|+|+||-- -...+|.|||||+-|.+|+.|||+|||+++
T Consensus 297 n~pgsdYINAnyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQEN 348 (600)
T KOG0790|consen 297 NIPGSDYINANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVWQEN 348 (600)
T ss_pred CCccchhcccchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHHhcc
Confidence 344678999997721 244667999999999999999999999874
No 44
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=97.79 E-value=6.8e-05 Score=63.49 Aligned_cols=50 Identities=32% Similarity=0.569 Sum_probs=30.8
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHH
Q psy10360 270 NWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDIL 325 (380)
Q Consensus 270 ~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~ 325 (380)
-.+|.++|+ ...+..++.++....+. ...++|||..|.||||+++|+..+
T Consensus 107 PI~D~~aPd-~~~~~~i~~eL~~~L~~-----g~~V~vHC~GGlGRtGlvAAcLLl 156 (168)
T PF05706_consen 107 PIPDGSAPD-FAAAWQILEELAARLEN-----GRKVLVHCRGGLGRTGLVAACLLL 156 (168)
T ss_dssp ---TTS----HHHHHHHHHHHHHHHHT-----T--EEEE-SSSSSHHHHHHHHHHH
T ss_pred CccCCCCCC-HHHHHHHHHHHHHHHHc-----CCEEEEECCCCCCHHHHHHHHHHH
Confidence 478899994 55566666666555442 679999999999999999886643
No 45
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=97.56 E-value=0.00021 Score=61.36 Aligned_cols=74 Identities=23% Similarity=0.348 Sum_probs=40.8
Q ss_pred EEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHH
Q psy10360 262 ELTHVWYTNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVV 341 (380)
Q Consensus 262 ~v~h~~y~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v 341 (380)
.+.|+....+.+..++.+.+.+.+.+..+... .+.||+|||..|..|||+.+|+.- .+ +..++.+++
T Consensus 58 ~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~-------~n~PvLiHC~~G~~rTG~vvg~lR---k~---Q~W~~~~i~ 124 (164)
T PF03162_consen 58 KLIHIPMSSSKDPWVPISEEQVAEALEIILDP-------RNYPVLIHCNHGKDRTGLVVGCLR---KL---QGWSLSSIF 124 (164)
T ss_dssp EEEE-------GGG----HHHHHHHHHHHH-G-------GG-SEEEE-SSSSSHHHHHHHHHH---HH---TTB-HHHHH
T ss_pred eEEEeccccccCccccCCHHHHHHHHHHHhCC-------CCCCEEEEeCCCCcchhhHHHHHH---HH---cCCCHHHHH
Confidence 34445555554434555566666655543322 268999999999999999998543 22 468889999
Q ss_pred HHHHHhc
Q psy10360 342 YNIRQCR 348 (380)
Q Consensus 342 ~~lR~qR 348 (380)
.+.|+-=
T Consensus 125 ~Ey~~f~ 131 (164)
T PF03162_consen 125 DEYRRFA 131 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9888753
No 46
>KOG1718|consensus
Probab=97.28 E-value=0.0054 Score=51.70 Aligned_cols=66 Identities=18% Similarity=0.323 Sum_probs=50.2
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcCCC
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLTGGA 376 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~~~ 376 (380)
.|-.+|||-||++||+.+|.+..+ +-...++.+.-..+...||-.=.|..-+ +-|..|-..++|..
T Consensus 94 gG~TLvHC~AGVSRSAsLClAYLm-----K~~~msLreAy~~vKa~RpiIRPN~GFw----~QLi~YE~qL~g~~ 159 (198)
T KOG1718|consen 94 GGKTLVHCVAGVSRSASLCLAYLM-----KYHCMSLREAYHWVKARRPIIRPNVGFW----RQLIDYEQQLFGNA 159 (198)
T ss_pred CCcEEEEEccccchhHHHHHHHHH-----HHccchHHHHHHHHHhhCceeCCCccHH----HHHHHHHHHhcCCC
Confidence 789999999999999999976654 2246788888888888887766665433 45667777777765
No 47
>KOG1719|consensus
Probab=97.00 E-value=0.011 Score=49.27 Aligned_cols=61 Identities=23% Similarity=0.470 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASK 371 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~ 371 (380)
...+-|||-||-|||.|.+++..+. .+.......+..+|+.|+...--+.|.. ++.+|...
T Consensus 109 GktvYVHCKAGRtRSaTvV~cYLmq-----~~~wtpe~A~~~vr~iRp~VlL~~~Qw~----~l~ef~~~ 169 (183)
T KOG1719|consen 109 GKTVYVHCKAGRTRSATVVACYLMQ-----HKNWTPEAAVEHVRKIRPRVLLRPAQWD----VLKEFYKQ 169 (183)
T ss_pred CCeEEEEecCCCccchhhhhhhhhh-----hcCCCHHHHHHHHHhcCcceeecHHHHH----HHHHHHHH
Confidence 6689999999999999999877552 2468889999999999999999999974 44544443
No 48
>KOG1716|consensus
Probab=96.87 E-value=0.004 Score=58.50 Aligned_cols=64 Identities=17% Similarity=0.370 Sum_probs=49.2
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcC
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYASKLTG 374 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~ 374 (380)
.+-++|||.+|++||.+++++.++.. ...++.+..+.++..|+....+.. |+ ..+++|.+.+..
T Consensus 155 ~~~vlVHC~~GvSRSat~viAYlM~~-----~~~~l~~A~~~vk~~R~~i~PN~g---f~-~QL~~~e~~l~~ 218 (285)
T KOG1716|consen 155 GGKVLVHCQAGVSRSATLVIAYLMKY-----EGLSLEDAYELVKSRRPIISPNFG---FL-RQLLEFEKRLSK 218 (285)
T ss_pred CCeEEEEcCCccchhHHHHHHHHHHH-----cCCCHHHHHHHHHHhCCccCCCHH---HH-HHHHHHHHhhcc
Confidence 78999999999999999998776643 368899999999999999877544 22 344555555543
No 49
>KOG2283|consensus
Probab=96.75 E-value=0.0025 Score=62.84 Aligned_cols=87 Identities=16% Similarity=0.292 Sum_probs=57.2
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhc
Q psy10360 269 TNWPTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCR 348 (380)
Q Consensus 269 ~~Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR 348 (380)
.+|+|+++|+ .+.+..|.+.+...... ....-++|||-+|-||||+.+.+.++...+.. .-.+.+..+-..|
T Consensus 78 ~~~~Dh~~P~-L~~l~~~c~~~~~WL~~---d~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~----ta~eald~~~~kR 149 (434)
T KOG2283|consen 78 FGFDDHNPPP-LELLCPFCKSMDNWLSE---DPKNVVVVHCKAGKGRTGVMICAYLIYSGISA----TAEEALDYFNEKR 149 (434)
T ss_pred cCCCCCCCCc-HHHHHHHHHCHHHHHhc---CccceEEEEccCCCcceEEEEeHHHHhhhhcC----CHHHHHHHHhhhh
Confidence 5899999994 45555555555554432 34678999999999999998776665554432 2233333334444
Q ss_pred ---C--CCCCChhHHHHHHH
Q psy10360 349 ---A--GAVATSQQYAFIYR 363 (380)
Q Consensus 349 ---~--~~V~t~~Qy~fiy~ 363 (380)
. +-+..+.|-+|++.
T Consensus 150 ~~~~~~~~~~~PSq~RYv~Y 169 (434)
T KOG2283|consen 150 FDEGKSKGVTIPSQRRYVGY 169 (434)
T ss_pred ccccccCCccCchhhHHHHH
Confidence 3 45778889888865
No 50
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=96.73 E-value=0.0092 Score=49.49 Aligned_cols=53 Identities=19% Similarity=0.313 Sum_probs=40.1
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQY 358 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy 358 (380)
..|++|||-+|+|||-..+.+.. +--....|-.++-+.||.-+|.+-.|.--.
T Consensus 93 ~apllIHC~aGISRStA~A~i~a----~ala~~~de~ela~~Lra~sp~atPN~Rli 145 (172)
T COG5350 93 FAPLLIHCYAGISRSTAAALIAA----LALAPDMDETELAERLRALSPYATPNPRLI 145 (172)
T ss_pred ccceeeeeccccccchHHHHHHH----HhhccccChHHHHHHHHhcCcccCCChhHH
Confidence 78999999999999977553321 122456777888999999999998876544
No 51
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=96.66 E-value=0.0023 Score=54.04 Aligned_cols=48 Identities=27% Similarity=0.389 Sum_probs=28.6
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHH
Q psy10360 272 PTTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILI 326 (380)
Q Consensus 272 pd~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~ 326 (380)
+|+..| .++.+=.|+..++.. +....+++||.+|.|||.+|.++..++
T Consensus 101 td~~~P-~~~~iD~fi~~v~~~------p~~~~l~fhC~~G~GRTTt~Mv~~~li 148 (149)
T PF14566_consen 101 TDHQAP-DPEDIDAFINFVKSL------PKDTWLHFHCQAGRGRTTTFMVMYDLI 148 (149)
T ss_dssp -TTS----HHHHHHHHHHHHTS-------TT-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred CCcCCC-CHHHHHHHHHHHHhC------CCCCeEEEECCCCCCHHHHHHHHHHHh
Confidence 455555 345554555444432 236899999999999999998876654
No 52
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=96.58 E-value=0.0037 Score=53.64 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=24.8
Q ss_pred CCcceEEEecCCCCCcHHHHHHHHHhCCCcEEEEcCCCccCC
Q psy10360 137 GEEKFYIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENS 178 (380)
Q Consensus 137 ~~~~~yI~tQ~Pl~~T~~dFW~mV~~~~v~~IVmL~~~~E~~ 178 (380)
.+...++-+-.|..-|.+|.+.+. +.+++.||-|-...|..
T Consensus 16 ir~g~lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E~~ 56 (164)
T PF13350_consen 16 IRPGRLYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTERE 56 (164)
T ss_dssp S-TTSEEEES--TT--HHHHHHHH-HTT--EEEE-S-HHHHH
T ss_pred ecCCcEEecCCcCcCCHHHHHHHH-hCCCCEEEECCCccccc
Confidence 344566677778888889998888 99999999998876643
No 53
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=96.34 E-value=0.018 Score=47.71 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=31.7
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCC
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAG 350 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~ 350 (380)
.+|+++||.+|- |||++.++.... . -++..+++...|..-..
T Consensus 86 ~~pvL~HC~sG~-Rt~~l~al~~~~-----~-g~~~~~i~~~~~~~G~~ 127 (135)
T TIGR01244 86 EGPVLAYCRSGT-RSSLLWGFRQAA-----E-GVPVEEIVRRAQAAGYD 127 (135)
T ss_pred CCCEEEEcCCCh-HHHHHHHHHHHH-----c-CCCHHHHHHHHHHcCCC
Confidence 689999999999 999998765432 2 27888888877765443
No 54
>KOG1717|consensus
Probab=96.11 E-value=0.026 Score=51.13 Aligned_cols=73 Identities=19% Similarity=0.394 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCCCChhHHHHHH
Q psy10360 283 LIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAVATSQQYAFIY 362 (380)
Q Consensus 283 ~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V~t~~Qy~fiy 362 (380)
.+.||.+++.. +.-++|||.+|++||-|.+++..+ +. -.+++.+....+.+.+.+.-.+ |-|+.
T Consensus 240 AIsfIdeArsk--------~cgvLVHClaGISRSvTvtvaYLM-qk----l~lslndAyd~Vk~kksnisPN---FnFMg 303 (343)
T KOG1717|consen 240 AISFIDEARSK--------NCGVLVHCLAGISRSVTVTVAYLM-QK----LNLSLNDAYDFVKHKKSNISPN---FNFMG 303 (343)
T ss_pred HHHHHHHhhcc--------CCcEEEeeeccccchhHHHHHHHH-HH----hccchhhHHHHHHHhccCCCCC---cchhH
Confidence 35566655542 678999999999999998877654 32 2466777777777777776555 34555
Q ss_pred HHHHHHHHHh
Q psy10360 363 RVLNVYASKL 372 (380)
Q Consensus 363 ~~l~~y~~~~ 372 (380)
.++ .|-+.+
T Consensus 304 QLl-dfertl 312 (343)
T KOG1717|consen 304 QLL-DFERTL 312 (343)
T ss_pred HHH-HHHHHh
Confidence 543 344443
No 55
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=95.16 E-value=0.034 Score=44.32 Aligned_cols=23 Identities=30% Similarity=0.599 Sum_probs=18.7
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDIL 325 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~ 325 (380)
.+||++||..|. |+++|.++.-.
T Consensus 86 ~~Pvl~hC~sG~-Ra~~l~~l~~~ 108 (110)
T PF04273_consen 86 PKPVLAHCRSGT-RASALWALAQA 108 (110)
T ss_dssp TTSEEEE-SCSH-HHHHHHHHHHH
T ss_pred CCCEEEECCCCh-hHHHHHHHHhh
Confidence 679999999997 99999887543
No 56
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=94.16 E-value=0.076 Score=48.85 Aligned_cols=25 Identities=44% Similarity=0.783 Sum_probs=22.1
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILI 326 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~ 326 (380)
++|+++||.+|.-|||..+|+...+
T Consensus 136 ~~PvL~HC~~GkdRTGl~~al~r~~ 160 (249)
T COG2365 136 NGPVLIHCTAGKDRTGLVAALYRKL 160 (249)
T ss_pred cCCEEEecCCCCcchHHHHHHHHHH
Confidence 5999999999999999999977543
No 57
>PLN02727 NAD kinase
Probab=93.77 E-value=0.11 Score=55.20 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=31.1
Q ss_pred CChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHH
Q psy10360 278 NEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDIL 325 (380)
Q Consensus 278 ~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~ 325 (380)
++.+.+.+|...++.. ...||++||..|.+|||++.|+...
T Consensus 324 pt~EqVe~fa~~l~~s-------lpkPVLvHCKSGarRAGamvA~yl~ 364 (986)
T PLN02727 324 PSAEQVEKFASLVSDS-------SKKPIYLHSKEGVWRTSAMVSRWKQ 364 (986)
T ss_pred CCHHHHHHHHHHHHhh-------cCCCEEEECCCCCchHHHHHHHHHH
Confidence 3556677766655321 2789999999999999999998754
No 58
>KOG4471|consensus
Probab=92.54 E-value=0.19 Score=50.50 Aligned_cols=75 Identities=19% Similarity=0.324 Sum_probs=48.8
Q ss_pred CCCCCEEEEcCCCCChhHHHHHHHHHHH-HHh-----------h-----CC---------CC------------CHHHHH
Q psy10360 300 REAGPLVIHCSPGTGRTGTVLACDILIR-HFE-----------T-----SR---------SV------------DVPRVV 341 (380)
Q Consensus 300 ~~~~PivVHCs~GvGRtG~f~al~~~~~-~l~-----------~-----~~---------~v------------dv~~~v 341 (380)
..+.||+||||+|=.||.-+.++.+++- -.. + +. .. -..+.|
T Consensus 372 ~~~~sVlVHCSDGWDRT~QlvsLA~LlLDpYYRTieGFqvLVEkeWLsFGHkFadRvGhg~ns~~~ndrsPVFLQwlDcV 451 (717)
T KOG4471|consen 372 SESRSVLVHCSDGWDRTAQLVSLAMLLLDPYYRTIEGFQVLVEKEWLSFGHKFADRVGHGNNSHGDNDRSPVFLQWLDCV 451 (717)
T ss_pred cCCceEEEEcCCCccchHHHHHHHHHHhchhhhhhhhhHHHHHHHHHhcCChhhhhcCCCCCcccccccCchhHHHHHHH
Confidence 3478999999999999999988776541 110 0 00 00 034778
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHHHHHHhcCCC
Q psy10360 342 YNIRQCRAGAVATSQQYAFIYRVLNVYASKLTGGA 376 (380)
Q Consensus 342 ~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~~~~~~~ 376 (380)
-.|-+|=|.+++=-++ |+..++.+++.=++|.+
T Consensus 452 ~Ql~rqfP~aFEFne~--fLi~i~dh~ySClFGTF 484 (717)
T KOG4471|consen 452 WQLMRQFPCAFEFNEA--FLIKIVDHLYSCLFGTF 484 (717)
T ss_pred HHHHHhCCcccccCHH--HHHHHHHHHHHhhhhhh
Confidence 8888888998885554 45555666665444443
No 59
>KOG1572|consensus
Probab=90.52 E-value=1.5 Score=39.41 Aligned_cols=40 Identities=23% Similarity=0.527 Sum_probs=28.1
Q ss_pred CCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQ 346 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~ 346 (380)
.+.|+++||.-|--|+|+++++.- .+.. ..+..++..-++
T Consensus 147 ~N~P~Lihc~rGkhRtg~lVgclR---klq~---W~lssil~Ey~~ 186 (249)
T KOG1572|consen 147 RNYPILIHCKRGKHRTGCLVGCLR---KLQN---WSLSSILDEYLR 186 (249)
T ss_pred cCCceEEecCCCCcchhhhHHHHH---HHhc---cchhHHHHHHHH
Confidence 378999999999999999998543 3322 455555544433
No 60
>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=86.63 E-value=1.4 Score=42.80 Aligned_cols=26 Identities=31% Similarity=0.581 Sum_probs=20.3
Q ss_pred CCCCEEEEcCCCCChhHHHHHHHHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTVLACDILI 326 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f~al~~~~ 326 (380)
...+|+|||++|-.||..++++..++
T Consensus 230 ~~~~Vlvh~~dGwDrt~q~~sL~ql~ 255 (353)
T PF06602_consen 230 EGSSVLVHCSDGWDRTSQLSSLAQLL 255 (353)
T ss_dssp T--EEEEECTTSSSHHHHHHHHHHHH
T ss_pred cCceEEEEcCCCCcccHHHHHHHHHH
Confidence 37899999999999999988766543
No 61
>KOG2386|consensus
Probab=81.70 E-value=3.6 Score=40.10 Aligned_cols=85 Identities=13% Similarity=0.270 Sum_probs=55.3
Q ss_pred CCCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcCCCC
Q psy10360 273 TTGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCSPGTGRTGTVLACDILIRHFETSRSVDVPRVVYNIRQCRAGAV 352 (380)
Q Consensus 273 d~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V 352 (380)
-+++.++....-.|+..+....... .....-|.|||..|..|||-+++..++ .. +...+.++++.+-..|+..+
T Consensus 96 g~~~vp~~~~v~~fv~~v~~f~~~~-~~~~~LI~vhcthG~NrtgyLI~~yL~----~~-~~~s~~~aik~f~~~r~~gi 169 (393)
T KOG2386|consen 96 GRGVVPRTELVDKFVKLVKGFVDDT-KLDDELIGVHCTHGLNRTGYLICAYLA----DV-GGYSSSEAIKRFADARPPGI 169 (393)
T ss_pred CcccCCCccchHHHHHHHHHHHhcc-cCCCCEEEEeCCCcccccceeeeeeee----ec-cCccHHHHHHHHHHhCCCcc
Confidence 3443333444445555555443322 123578999999999999988754332 22 34889999999999999988
Q ss_pred CChhHHHHHHH
Q psy10360 353 ATSQQYAFIYR 363 (380)
Q Consensus 353 ~t~~Qy~fiy~ 363 (380)
.-.+-+.=+|.
T Consensus 170 ~k~dyi~~L~~ 180 (393)
T KOG2386|consen 170 EKQDYIDALYS 180 (393)
T ss_pred CchHHHHHHhh
Confidence 77766554443
No 62
>KOG1089|consensus
Probab=77.89 E-value=4.5 Score=41.24 Aligned_cols=58 Identities=22% Similarity=0.362 Sum_probs=39.7
Q ss_pred CCCCEEEEcCCCCChhHHHHHHHHHH------------HHHhh------------CCCC---C------------HHHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTVLACDILI------------RHFET------------SRSV---D------------VPRVV 341 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f~al~~~~------------~~l~~------------~~~v---d------------v~~~v 341 (380)
...+||||||+|-.||...+.+..+| ..+++ -+.+ + ..+.|
T Consensus 343 ~~~sVlvhcsdGwDrT~qV~SLaQllLDP~yRTi~GFqsLIeKeWi~~GH~F~~Rc~hl~~~~~~~ke~SPvF~qFLDcv 422 (573)
T KOG1089|consen 343 EGASVLVHCSDGWDRTCQVSSLAQLLLDPYYRTIKGFQSLIEKEWISFGHKFLDRCGHLAYNDGDSKEESPVFLQFLDCV 422 (573)
T ss_pred CCCeEEEEccCCcchhHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHcCCcHHHhcCCcccccCCCcccCcHHHHHHHHH
Confidence 35899999999999999988766433 11111 0111 1 45788
Q ss_pred HHHHHhcCCCCCChhHH
Q psy10360 342 YNIRQCRAGAVATSQQY 358 (380)
Q Consensus 342 ~~lR~qR~~~V~t~~Qy 358 (380)
..|-+|.|.+++=-+.|
T Consensus 423 wQl~~QfP~~FEFne~f 439 (573)
T KOG1089|consen 423 WQLLEQFPCAFEFNERF 439 (573)
T ss_pred HHHHhhCCcceehhHHH
Confidence 88999999999854444
No 63
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=72.49 E-value=5 Score=34.41 Aligned_cols=33 Identities=6% Similarity=0.175 Sum_probs=30.4
Q ss_pred EEEeCCCCcCCHHHHHHHHHhcCCcEEEEeccc
Q psy10360 58 YIACQAPLQNTIEDFWRMIWTHQSKVILMITAL 90 (380)
Q Consensus 58 ~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~~~~ 90 (380)
+|++-+|+++++.+|-...-+.++..||.++..
T Consensus 18 ~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~ 50 (166)
T PTZ00242 18 FLILDAPSPSNLPLYIKELQRYNVTHLVRVCGP 50 (166)
T ss_pred EEEecCCCcccHHHHHHHHHhCCCeEEEecCCC
Confidence 899999999999999999999999999988654
No 64
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=59.71 E-value=10 Score=34.52 Aligned_cols=32 Identities=6% Similarity=0.099 Sum_probs=29.9
Q ss_pred EEEeCCCCcCCHHHHHHHHHhcCCcEEEEecc
Q psy10360 58 YIACQAPLQNTIEDFWRMIWTHQSKVILMITA 89 (380)
Q Consensus 58 ~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~~~ 89 (380)
||++-+|++.++.+|..-....++..||.++.
T Consensus 94 fLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE 125 (241)
T PTZ00393 94 ILILDAPTNDLLPLYIKEMKNYNVTDLVRTCE 125 (241)
T ss_pred EEEeCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 89999999999999999999999999998765
No 65
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.20 E-value=29 Score=27.98 Aligned_cols=14 Identities=43% Similarity=0.994 Sum_probs=11.5
Q ss_pred CCCEEEEcCCCCChh
Q psy10360 302 AGPLVIHCSPGTGRT 316 (380)
Q Consensus 302 ~~PivVHCs~GvGRt 316 (380)
.+|++.||..|. |+
T Consensus 87 egPVlayCrsGt-Rs 100 (130)
T COG3453 87 EGPVLAYCRSGT-RS 100 (130)
T ss_pred CCCEEeeecCCc-hH
Confidence 799999998875 44
No 66
>KOG2836|consensus
Probab=50.33 E-value=43 Score=27.57 Aligned_cols=39 Identities=10% Similarity=0.246 Sum_probs=32.9
Q ss_pred EEEeCCCCcCCHHHHHHHHHhcCCcEEEEeccccccCCC
Q psy10360 58 YIACQAPLQNTIEDFWRMIWTHQSKVILMITALFENSGP 96 (380)
Q Consensus 58 ~I~tQ~P~~~t~~dFW~mi~~~~~~~iv~~~~~~e~~~~ 96 (380)
|.+|-.|...|+..|-.-.=.+++..+|-.+...=+..+
T Consensus 19 FLIThnPtnaTln~fieELkKygvttvVRVCe~TYdt~~ 57 (173)
T KOG2836|consen 19 FLITHNPTNATLNKFIEELKKYGVTTVVRVCEPTYDTTP 57 (173)
T ss_pred EEEecCCCchhHHHHHHHHHhcCCeEEEEecccccCCch
Confidence 899999999999999999999999999988766444333
No 67
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=48.69 E-value=21 Score=27.27 Aligned_cols=19 Identities=16% Similarity=0.333 Sum_probs=14.6
Q ss_pred CCCCEEEEcCCCCChhHHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTVL 320 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f~ 320 (380)
...||||+|..| .||...+
T Consensus 60 ~~~~ivvyC~~G-~rs~~a~ 78 (101)
T cd01518 60 KGKKVLMYCTGG-IRCEKAS 78 (101)
T ss_pred CCCEEEEECCCc-hhHHHHH
Confidence 367999999887 6877543
No 68
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=45.68 E-value=23 Score=26.96 Aligned_cols=18 Identities=11% Similarity=0.283 Sum_probs=13.6
Q ss_pred CCCCEEEEcCCCCChhHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f 319 (380)
...|++|+|..|. ||...
T Consensus 60 ~~~~ivv~C~~G~-rs~~a 77 (100)
T cd01523 60 DDQEVTVICAKEG-SSQFV 77 (100)
T ss_pred CCCeEEEEcCCCC-cHHHH
Confidence 3679999999884 76543
No 69
>KOG0208|consensus
Probab=39.88 E-value=71 Score=35.02 Aligned_cols=65 Identities=26% Similarity=0.371 Sum_probs=51.3
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhC---------CCCCHHHHHHHHHHhcCCCCCChh--HHHHHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETS---------RSVDVPRVVYNIRQCRAGAVATSQ--QYAFIYRVLN 366 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~---------~~vdv~~~v~~lR~qR~~~V~t~~--Qy~fiy~~l~ 366 (380)
-+-.|-.|.+|..-+|++=|+|..++.=+.+ +..+|..+..-+|+-|...|.+.. ||+-+|.++.
T Consensus 851 l~y~VgfCGDGANDCgALKaAdvGISLSeaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iq 926 (1140)
T KOG0208|consen 851 LGYKVGFCGDGANDCGALKAADVGISLSEAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQ 926 (1140)
T ss_pred cCcEEEecCCCcchhhhhhhcccCcchhhhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 5788999999999999999999887766554 345788888889999999998765 5555565543
No 70
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=36.63 E-value=71 Score=24.62 Aligned_cols=16 Identities=31% Similarity=0.625 Sum_probs=12.5
Q ss_pred CCCEEEEcCCCCChhHH
Q psy10360 302 AGPLVIHCSPGTGRTGT 318 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~ 318 (380)
..|++|+|..|. ||..
T Consensus 66 ~~~ivv~C~~G~-rs~~ 81 (109)
T cd01533 66 RTPIVVNCAGRT-RSII 81 (109)
T ss_pred CCeEEEECCCCc-hHHH
Confidence 579999999886 6633
No 71
>PLN02160 thiosulfate sulfurtransferase
Probab=36.35 E-value=38 Score=27.79 Aligned_cols=17 Identities=24% Similarity=0.575 Sum_probs=13.6
Q ss_pred CCCEEEEcCCCCChhHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f 319 (380)
..||+|+|..| +||...
T Consensus 81 ~~~IivyC~sG-~RS~~A 97 (136)
T PLN02160 81 ADDILVGCQSG-ARSLKA 97 (136)
T ss_pred CCcEEEECCCc-HHHHHH
Confidence 67999999988 677654
No 72
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=35.69 E-value=70 Score=31.46 Aligned_cols=43 Identities=30% Similarity=0.409 Sum_probs=31.4
Q ss_pred CCCCCChhHHHHHHHHHHHHhhhhcCCCCCCEEEEcC--CCCChhHHHHHHHH
Q psy10360 274 TGVPNEESSLIAFLIEARAHMKGAAGREAGPLVIHCS--PGTGRTGTVLACDI 324 (380)
Q Consensus 274 ~~vP~~~~~~l~~i~~v~~~~~~~~~~~~~PivVHCs--~GvGRtG~f~al~~ 324 (380)
.|+.+.+..++.-++++-.. .+-++|..- .|+||||.|-|.+.
T Consensus 197 gGV~~~~~~fl~~lr~lCd~--------~g~LLI~DEVQtG~GRTGk~fA~e~ 241 (404)
T COG4992 197 GGVIPAPPEFLKALRELCDE--------HGALLILDEVQTGLGRTGKLFAYEH 241 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHH--------hCeEEEEeccccCCCccchHHHHHH
Confidence 46776777777766665443 577777765 89999999987664
No 73
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=31.29 E-value=92 Score=24.45 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=13.0
Q ss_pred CCCCEEEEcCCCCChhHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f 319 (380)
...||+|+|..| |+.+..
T Consensus 78 ~~~~vv~~c~~g-~~~a~~ 95 (122)
T cd01448 78 NDDTVVVYDDGG-GFFAAR 95 (122)
T ss_pred CCCEEEEECCCC-CccHHH
Confidence 367999999998 444443
No 74
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=29.62 E-value=53 Score=25.04 Aligned_cols=17 Identities=29% Similarity=0.864 Sum_probs=13.5
Q ss_pred CCCCEEEEcCCCCChhHH
Q psy10360 301 EAGPLVIHCSPGTGRTGT 318 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~ 318 (380)
...|++|+|..|. ||+.
T Consensus 60 ~~~~ivv~C~~G~-rS~~ 76 (110)
T COG0607 60 DDDPIVVYCASGV-RSAA 76 (110)
T ss_pred CCCeEEEEeCCCC-ChHH
Confidence 3789999999996 5544
No 75
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=29.57 E-value=96 Score=23.48 Aligned_cols=17 Identities=24% Similarity=0.577 Sum_probs=12.7
Q ss_pred CCCCEEEEcCCCCChhHH
Q psy10360 301 EAGPLVIHCSPGTGRTGT 318 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~ 318 (380)
...||||+|..|. |+..
T Consensus 65 ~~~~ivv~c~~g~-~s~~ 81 (106)
T cd01519 65 KDKELIFYCKAGV-RSKA 81 (106)
T ss_pred CCCeEEEECCCcH-HHHH
Confidence 3679999999875 5543
No 76
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=29.48 E-value=57 Score=27.69 Aligned_cols=19 Identities=21% Similarity=0.272 Sum_probs=15.6
Q ss_pred CCCCEEEEcCCCCChhHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f 319 (380)
...||||.|..|+.|+...
T Consensus 115 ~d~~IVvYC~~G~~~S~~a 133 (162)
T TIGR03865 115 KDRPLVFYCLADCWMSWNA 133 (162)
T ss_pred CCCEEEEEECCCCHHHHHH
Confidence 3789999999988787753
No 77
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=28.91 E-value=26 Score=29.33 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=23.6
Q ss_pred CCCCcCCHHHHHHHHHhcCCcEEEEeccccccCCCccccceeecccCCCccc
Q psy10360 62 QAPLQNTIEDFWRMIWTHQSKVILMITALFENSGPKGEEKFYIACQAPLQNT 113 (380)
Q Consensus 62 Q~P~~~t~~dFW~mi~~~~~~~iv~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 113 (380)
++|.+..++.|-+.|...-.. .-+-.||++|-|||
T Consensus 104 ~~P~~~~iD~fi~~v~~~p~~-----------------~~l~fhC~~G~GRT 138 (149)
T PF14566_consen 104 QAPDPEDIDAFINFVKSLPKD-----------------TWLHFHCQAGRGRT 138 (149)
T ss_dssp S---HHHHHHHHHHHHTS-TT------------------EEEEE-SSSSHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCC-----------------CeEEEECCCCCCHH
Confidence 789999999999999765221 23458999999998
No 78
>PF02061 Lambda_CIII: Lambda Phage CIII; InterPro: IPR013056 Bacteriophage lambda regulatory protein CIII is a small protein that plays a role in stabilising the CII transcriptional activator, via a mechanism that is not yet fully understood [, ]. Stabilised CII activates CI, the gene for the repressor protein that prevents transcription of proteins required for lytic development. The central portion of the protein is well conserved and is both necessary and sufficient for the activity of the protein []. Comparative analysis of the CIII sequence in lambda, Bacteriophage HK022 and the lambdoid Enterobacteria phage P22 has led to the suggestion that this central region assumes an amphipathic alpha-helical structure []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=25.82 E-value=1.4e+02 Score=19.07 Aligned_cols=24 Identities=25% Similarity=0.529 Sum_probs=19.9
Q ss_pred EEEeCCCCCCCCCCChhHHHHHHH
Q psy10360 265 HVWYTNWPTTGVPNEESSLIAFLI 288 (380)
Q Consensus 265 h~~y~~Wpd~~vP~~~~~~l~~i~ 288 (380)
+|++.+||--|+|.-.+++++.|.
T Consensus 2 ~~~~AG~~~~G~~ql~ESLLdrIt 25 (45)
T PF02061_consen 2 QYAIAGWPRMGCPQLSESLLDRIT 25 (45)
T ss_pred eeeecCccccCCchhhHHHHHHHH
Confidence 578899999999977788887764
No 79
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=24.13 E-value=1.4e+02 Score=23.13 Aligned_cols=17 Identities=18% Similarity=0.561 Sum_probs=12.8
Q ss_pred CCCEEEEcCCCCChhHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f 319 (380)
..|++++|.+| .||...
T Consensus 60 ~~~IVlyC~~G-~rS~~a 76 (104)
T PRK10287 60 NDTVKLYCNAG-RQSGQA 76 (104)
T ss_pred CCeEEEEeCCC-hHHHHH
Confidence 57899999887 565554
No 80
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=23.98 E-value=79 Score=23.66 Aligned_cols=18 Identities=17% Similarity=0.158 Sum_probs=12.9
Q ss_pred CCCCEEEEcCCCCChhHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f 319 (380)
...+|+|+|..| +|+...
T Consensus 55 ~~~~ivv~c~~g-~~s~~~ 72 (96)
T cd01529 55 RATRYVLTCDGS-LLARFA 72 (96)
T ss_pred CCCCEEEEeCCh-HHHHHH
Confidence 367999999866 566543
No 81
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=22.51 E-value=1.6e+02 Score=22.66 Aligned_cols=18 Identities=17% Similarity=0.495 Sum_probs=13.5
Q ss_pred CCCEEEEcCCCCChhHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVL 320 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~ 320 (380)
..|++|+|..|. ||...+
T Consensus 58 ~~~vvlyC~~G~-rS~~aa 75 (101)
T TIGR02981 58 NDTVKLYCNAGR-QSGMAK 75 (101)
T ss_pred CCeEEEEeCCCH-HHHHHH
Confidence 578999999884 766553
No 82
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=22.39 E-value=84 Score=24.88 Aligned_cols=18 Identities=22% Similarity=0.593 Sum_probs=13.7
Q ss_pred CCCCEEEEcCCCCChhHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTV 319 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f 319 (380)
...|++|+|..|. |+...
T Consensus 71 ~~~~ivv~C~~G~-rs~~a 88 (122)
T cd01526 71 KDSPIYVVCRRGN-DSQTA 88 (122)
T ss_pred CCCcEEEECCCCC-cHHHH
Confidence 3689999999884 76543
No 83
>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily. They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).
Probab=22.33 E-value=88 Score=24.92 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=14.6
Q ss_pred CCCCEEEEcCCCCChhHHHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTVLA 321 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f~a 321 (380)
...+|||||..+..||...+.
T Consensus 67 ~~~~vv~yC~~sg~rs~~aa~ 87 (121)
T cd01530 67 KRRVLIFHCEFSSKRGPRMAR 87 (121)
T ss_pred CCCEEEEECCCccccHHHHHH
Confidence 478999999744467665443
No 84
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=21.86 E-value=1.3e+02 Score=23.05 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=35.9
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHHHHHhhCCC------CCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLACDILIRHFETSRS------VDVPRVVYNIRQCRAGAVATSQQYAFIYRVLNVYAS 370 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~------vdv~~~v~~lR~qR~~~V~t~~Qy~fiy~~l~~y~~ 370 (380)
..-|++-|.+|++ |+.++ .-+-+.+++.+. .++.++-..+ ...-.|-...|..|.+.-+...+.
T Consensus 3 ~~~ILl~C~~G~s-SS~l~--~k~~~~~~~~gi~~~v~a~~~~~~~~~~--~~~Dvill~pqi~~~~~~i~~~~~ 72 (95)
T TIGR00853 3 ETNILLLCAAGMS-TSLLV--NKMNKAAEEYGVPVKIAAGSYGAAGEKL--DDADVVLLAPQVAYMLPDLKKETD 72 (95)
T ss_pred ccEEEEECCCchh-HHHHH--HHHHHHHHHCCCcEEEEEecHHHHHhhc--CCCCEEEECchHHHHHHHHHHHhh
Confidence 3468999999998 55433 444444444332 1233322111 234566677788887766665543
No 85
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=21.49 E-value=1e+02 Score=23.14 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=11.6
Q ss_pred CCCEEEEcCCCCChhH
Q psy10360 302 AGPLVIHCSPGTGRTG 317 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG 317 (380)
..|+||+|..| .|+.
T Consensus 61 ~~~ivv~c~~g-~~s~ 75 (103)
T cd01447 61 DKPFVFYCASG-WRSA 75 (103)
T ss_pred CCeEEEEcCCC-CcHH
Confidence 67999999876 4553
No 86
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=20.53 E-value=1e+02 Score=24.67 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=15.1
Q ss_pred CCCCEEEEcCCCCChhHHHH
Q psy10360 301 EAGPLVIHCSPGTGRTGTVL 320 (380)
Q Consensus 301 ~~~PivVHCs~GvGRtG~f~ 320 (380)
...|+||.|..|..||...+
T Consensus 85 ~~~~vvvyC~~~G~rs~~a~ 104 (128)
T cd01520 85 RDPKLLIYCARGGMRSQSLA 104 (128)
T ss_pred CCCeEEEEeCCCCccHHHHH
Confidence 47899999986666777555
No 87
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=20.44 E-value=1.1e+02 Score=23.25 Aligned_cols=19 Identities=16% Similarity=0.102 Sum_probs=14.1
Q ss_pred CCCEEEEcCCCCChhHHHHH
Q psy10360 302 AGPLVIHCSPGTGRTGTVLA 321 (380)
Q Consensus 302 ~~PivVHCs~GvGRtG~f~a 321 (380)
..|++|+|..|. |++.++.
T Consensus 65 ~~~vv~~c~~g~-~s~~~a~ 83 (105)
T cd01525 65 GKIIVIVSHSHK-HAALFAA 83 (105)
T ss_pred CCeEEEEeCCCc-cHHHHHH
Confidence 569999998886 6665543
No 88
>KOG1901|consensus
Probab=20.02 E-value=6.2e+02 Score=25.69 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=32.2
Q ss_pred CCCCCCCCCCCCCeeEecCCCC---CCCCCCCceeecccCCCCCCCceEEE
Q psy10360 13 KNRYANVIPIPETRVRLCSGGE---AASDSEDYINANYVRGPKGEEKFYIA 60 (380)
Q Consensus 13 kNR~~~i~p~d~sRV~L~~~~~---~~~~~~~YINAs~v~~~~~~~~~~I~ 60 (380)
++|+..++--+.+++.-....+ .+...+.|..++|.-.+... +|||+
T Consensus 255 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~yn~~~f~~~~~nA-kfFVI 304 (487)
T KOG1901|consen 255 DSRGQDINSSGPTEAGSASAPESNESVKRRDRYNPPDFLTDYSNA-KFFVI 304 (487)
T ss_pred cccCccccCCcchhccccccccccccccChhhcCccccccccccc-eEEEE
Confidence 5677777777777776554421 23346789999999988854 66765
Done!