Query psy10361
Match_columns 236
No_of_seqs 157 out of 1829
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 15:57:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 99.9 4E-23 1.4E-27 157.8 22.8 191 21-234 48-282 (284)
2 3kld_A Contactin 4, axcam, BIG 99.9 5E-23 1.7E-27 164.0 18.9 176 35-235 156-382 (384)
3 3b43_A Titin; I-SET IG fold, e 99.9 2.5E-22 8.5E-27 167.8 22.3 186 20-228 239-465 (570)
4 3b43_A Titin; I-SET IG fold, e 99.9 3.3E-23 1.1E-27 173.1 16.8 192 21-236 334-570 (570)
5 2wim_A N-CAM 2, NCAM2, neural 99.9 3.4E-22 1.2E-26 153.1 17.4 189 21-234 47-282 (291)
6 4fqp_A Poliovirus receptor; im 99.9 1.4E-21 5E-26 151.4 20.5 210 1-235 37-303 (313)
7 2y25_A Myomesin; structural pr 99.9 2.1E-21 7E-26 150.4 20.4 201 21-234 50-313 (317)
8 1qz1_A Neural cell adhesion mo 99.9 9.3E-22 3.2E-26 150.7 16.8 195 21-235 48-289 (291)
9 1cs6_A Axonin-1; neural cell a 99.9 2E-21 6.7E-26 154.5 18.6 175 35-235 157-381 (382)
10 2ocw_A Polymeric-immunoglobuli 99.9 1.7E-20 5.8E-25 157.0 24.7 193 21-227 275-533 (585)
11 2v5m_A Dscam; neurobiology SPL 99.9 4.8E-21 1.6E-25 152.5 18.6 108 89-227 269-377 (388)
12 2yd9_A Receptor-type tyrosine- 99.9 1.8E-21 6.2E-26 150.1 15.6 182 22-227 49-279 (304)
13 3p3y_A Neurofascin; IG domains 99.9 2.1E-21 7E-26 155.3 16.3 126 89-236 274-403 (404)
14 3laf_A Deleted in colorectal c 99.9 2.8E-21 9.5E-26 154.5 17.0 176 35-234 176-399 (403)
15 4fom_A Poliovirus receptor-rel 99.9 9.2E-22 3.1E-26 152.0 12.9 181 22-227 61-288 (308)
16 3oq3_B IFN-alpha/beta binding 99.9 2.1E-20 7.2E-25 145.9 19.9 182 35-228 88-319 (329)
17 2y23_A Myomesin; structural pr 99.9 2.6E-20 9E-25 143.8 19.4 195 18-229 42-302 (312)
18 1itb_B Type 1 interleukin-1 re 99.9 1.3E-20 4.4E-25 146.0 16.9 187 37-234 63-312 (315)
19 3ejj_X Macrophage colony-stimu 99.9 5.1E-20 1.7E-24 140.8 18.8 179 33-227 48-269 (289)
20 1wio_A CD4, T-cell surface gly 99.9 8.4E-21 2.9E-25 150.0 14.5 185 22-227 52-281 (363)
21 2wng_A Tyrosine-protein phosph 99.9 3.9E-20 1.3E-24 144.2 17.1 193 23-230 58-310 (327)
22 2o26_X MAST/stem cell growth f 99.9 8.5E-20 2.9E-24 139.8 18.5 178 36-227 57-276 (290)
23 3u83_A Poliovirus receptor-rel 99.9 4.3E-20 1.5E-24 144.0 16.9 188 21-235 78-319 (331)
24 1ry7_B FGFR-3, fibroblast grow 99.8 4E-21 1.4E-25 150.0 10.2 134 89-235 179-326 (334)
25 4dep_C Interleukin-1 receptor 99.8 3.4E-21 1.2E-25 151.4 9.8 185 36-228 79-322 (349)
26 3rjd_A High affinity immunoglo 99.8 4.5E-20 1.5E-24 139.1 15.5 167 34-228 46-248 (262)
27 4dkd_C Macrophage colony-stimu 99.8 1.5E-20 5.2E-25 144.0 13.1 179 34-227 49-269 (292)
28 1qgc_4 Protein (immunoglobulin 99.8 8.5E-20 2.9E-24 147.6 18.1 188 22-224 63-318 (438)
29 2wv3_A Neuroplastin; igcam, me 99.8 1.3E-18 4.3E-23 125.1 21.3 158 46-227 18-178 (190)
30 3dmk_A DOWN syndrome cell adhe 99.8 2.4E-19 8.3E-24 155.5 20.4 179 36-234 306-524 (816)
31 2ocw_A Polymeric-immunoglobuli 99.8 1.6E-18 5.5E-23 145.1 24.3 196 22-234 170-439 (585)
32 1e07_A Carcinoembryonic antige 99.8 4.9E-19 1.7E-23 149.8 20.8 182 21-234 331-555 (642)
33 1bih_A Hemolin; insect immunit 99.8 2.8E-19 9.4E-24 142.6 17.4 112 90-227 270-384 (395)
34 3qs7_E FL cytokine receptor; i 99.8 5.8E-19 2E-23 142.2 18.5 184 35-234 102-321 (423)
35 2ec8_A MAST/stem cell growth f 99.8 6.9E-19 2.4E-23 145.5 19.3 186 21-227 158-399 (524)
36 4fa8_A Secreted protein BARF1; 99.8 4.4E-20 1.5E-24 134.3 10.7 129 88-234 67-197 (203)
37 1e07_A Carcinoembryonic antige 99.8 1.8E-18 6E-23 146.4 21.5 176 21-228 153-367 (642)
38 2rcj_C Light chain; immunoglob 99.8 1.7E-18 5.9E-23 143.1 19.0 191 22-228 58-305 (523)
39 2j8h_A Titin, connectin; cardi 99.8 4.3E-18 1.5E-22 122.9 18.8 132 89-236 61-197 (197)
40 3o4o_C Interleukin-1 receptor 99.8 6.1E-20 2.1E-24 143.6 9.7 182 36-227 81-323 (339)
41 3mjg_X Beta-type platelet-deri 99.8 1E-18 3.5E-23 133.6 15.9 115 98-227 149-266 (289)
42 3qs9_E FL cytokine receptor; i 99.8 8.8E-19 3E-23 144.8 16.4 184 35-235 102-322 (527)
43 3kld_A Contactin 4, axcam, BIG 99.8 4.8E-19 1.6E-23 141.0 13.8 123 89-228 156-283 (384)
44 1igt_B IGG2A intact antibody - 99.8 6.6E-19 2.3E-23 142.8 14.8 204 22-228 65-330 (444)
45 3dmk_A DOWN syndrome cell adhe 99.8 1.8E-18 6.1E-23 150.1 17.7 172 35-228 578-798 (816)
46 2yd6_A PTPRD protein; hydrolas 99.8 2.3E-17 7.7E-22 120.7 20.8 128 88-227 61-191 (212)
47 2v44_A NCAM2, neural cell adhe 99.8 1.1E-17 3.7E-22 120.0 17.9 117 89-227 57-175 (189)
48 3lcy_A Titin; A-BAND, IG tande 99.8 3.7E-17 1.3E-21 117.8 19.9 130 89-236 62-196 (197)
49 3laf_A Deleted in colorectal c 99.8 1.2E-17 4.2E-22 133.4 18.8 119 89-227 176-299 (403)
50 2rcj_C Light chain; immunoglob 99.8 7.4E-18 2.5E-22 139.3 17.5 176 37-227 179-408 (523)
51 2a38_A Titin; Z1Z2, structural 99.8 3.4E-17 1.2E-21 117.8 18.8 122 88-227 61-183 (194)
52 3b5h_A Cervical EMMPRIN, HAB18 99.8 2.6E-17 8.9E-22 117.6 18.0 166 43-235 10-182 (184)
53 3qs9_E FL cytokine receptor; i 99.8 2.1E-18 7.3E-23 142.6 13.6 112 90-227 290-402 (527)
54 2ec8_A MAST/stem cell growth f 99.8 1E-17 3.4E-22 138.5 17.6 180 34-227 78-297 (524)
55 1bih_A Hemolin; insect immunit 99.8 1.5E-17 5.1E-22 132.5 18.0 181 34-228 60-295 (395)
56 2yd1_A Tyrosine-protein phosph 99.8 4.3E-17 1.5E-21 119.1 19.0 129 89-235 63-199 (212)
57 1epf_A NCAM, protein (neural c 99.8 1.3E-17 4.6E-22 119.7 15.7 121 88-230 60-182 (191)
58 3qs7_E FL cytokine receptor; i 99.8 6.3E-18 2.1E-22 136.2 15.3 111 90-227 290-402 (423)
59 2r15_A Myomesin-1; sarcomeric 99.8 3.3E-17 1.1E-21 119.5 17.9 139 89-234 58-208 (212)
60 3vh8_G Killer cell immunoglobu 99.8 3E-18 1E-22 132.9 12.4 119 88-227 172-296 (316)
61 3rbs_A Myomesin-1; immunoglobu 99.8 1.8E-17 6.2E-22 120.9 15.2 125 88-228 59-196 (207)
62 3v2a_R Vascular endothelial gr 99.8 2.8E-20 9.5E-25 160.3 0.0 124 90-234 625-754 (772)
63 2iep_A Muscle-specific kinase 99.8 2.7E-17 9.3E-22 118.1 15.5 115 89-227 61-177 (192)
64 1fnl_A Low affinity immunoglob 99.8 1.1E-17 3.6E-22 118.8 12.8 150 44-235 20-173 (175)
65 1qgc_4 Protein (immunoglobulin 99.8 9.6E-19 3.3E-23 141.4 8.1 126 88-228 295-428 (438)
66 1wio_A CD4, T-cell surface gly 99.8 5.8E-18 2E-22 133.7 12.4 104 89-235 254-362 (363)
67 3p3y_A Neurofascin; IG domains 99.8 1.4E-17 4.8E-22 133.0 14.6 122 89-227 170-299 (404)
68 1za6_B IGG heavy chain; immuno 99.8 2.6E-18 9E-23 134.8 9.9 208 21-232 64-335 (344)
69 2va4_A NCAM2, N-CAM 2, neural 99.8 2.1E-16 7E-21 113.4 19.0 121 89-228 57-182 (192)
70 2x1w_L Vascular endothelial gr 99.7 2.5E-17 8.4E-22 120.6 13.4 134 90-235 64-206 (213)
71 1iga_A IGA1; immunoglobulin; N 99.7 7.6E-17 2.6E-21 131.8 17.5 204 22-228 66-334 (475)
72 2v5t_A NCAM2, N-CAM 2, neural 99.7 3.2E-17 1.1E-21 117.4 13.3 123 89-234 56-186 (189)
73 2v5m_A Dscam; neurobiology SPL 99.7 7.9E-17 2.7E-21 128.1 16.7 177 35-227 58-294 (388)
74 3sgj_C Human FCG3A receptor; r 99.7 3.3E-17 1.1E-21 119.3 11.9 149 44-234 20-172 (204)
75 3k0w_A Mucosa-associated lymph 99.7 7.5E-17 2.6E-21 118.4 13.9 156 45-234 32-200 (218)
76 3r4d_A CEA-related cell adhesi 99.7 6.3E-17 2.2E-21 117.7 13.4 116 89-227 70-187 (208)
77 2c1o_A IGK-C protein; FAB frag 99.7 5.5E-18 1.9E-22 127.3 7.8 128 88-227 111-243 (254)
78 2c5d_C AXL oncogene, tyrosine- 99.7 5.2E-16 1.8E-20 111.8 17.7 118 89-234 67-191 (195)
79 1hng_A CD2; T lymphocyte adhes 99.7 2.2E-16 7.5E-21 112.2 15.3 153 33-230 11-167 (176)
80 1rhf_A Tyrosine-protein kinase 99.7 3.3E-16 1.1E-20 111.5 15.9 116 89-234 59-181 (182)
81 2jll_A NCAM2, neural cell adhe 99.7 6.8E-16 2.3E-20 122.7 19.2 122 88-228 61-183 (389)
82 1cs6_A Axonin-1; neural cell a 99.7 7.7E-17 2.6E-21 128.0 13.5 172 36-227 61-281 (382)
83 3jz7_A MCAR, CAR, coxsackievir 99.7 3.3E-17 1.1E-21 119.5 10.2 117 88-227 82-200 (214)
84 1f97_A Junction adhesion molec 99.7 1.7E-16 5.8E-21 115.6 13.8 120 90-229 65-195 (212)
85 2fbo_J V1V2;, variable region- 99.7 4.8E-17 1.6E-21 121.7 10.8 123 89-227 89-237 (250)
86 2rik_A Titin; I-SET IG fold, p 99.7 3.1E-15 1.1E-19 113.9 20.8 119 88-227 59-179 (284)
87 2nzi_A Titin; IG-domain, FNIII 99.7 1.9E-15 6.5E-20 116.3 19.6 123 89-227 61-185 (305)
88 1sy6_A T-cell surface glycopro 99.7 3.5E-16 1.2E-20 113.8 14.3 165 38-228 10-192 (204)
89 3ojm_B Fibroblast growth facto 99.7 6.3E-16 2.1E-20 114.0 15.4 134 89-235 75-220 (231)
90 1igy_B IGG1 intact antibody MA 99.7 1.1E-18 3.7E-23 141.1 0.2 202 22-228 64-320 (434)
91 2yd9_A Receptor-type tyrosine- 99.7 1.1E-15 3.6E-20 117.8 16.9 124 89-227 62-188 (304)
92 3mj8_L Stimulatory hamster ant 99.7 8.3E-17 2.8E-21 117.6 9.8 138 77-227 59-201 (213)
93 1hzh_H IGG, immunoglobulin hea 99.7 2.5E-17 8.5E-22 134.0 7.6 199 21-227 64-338 (457)
94 1zvo_C Myeloma immunoglobulin 99.7 1.3E-15 4.5E-20 125.6 17.7 77 150-227 308-385 (512)
95 4f80_A Butyrophilin subfamily 99.7 4.2E-16 1.4E-20 115.0 13.3 121 88-227 81-201 (226)
96 3esu_F Antibody 14B7* light ch 99.7 1.1E-15 3.9E-20 114.3 15.5 146 88-234 72-248 (250)
97 1ugn_A LIR1, leukocyte immunog 99.7 5.2E-16 1.8E-20 112.2 13.0 122 88-227 56-181 (198)
98 1f2q_A High affinity immunoglo 99.7 1.3E-16 4.3E-21 113.3 9.5 118 88-235 49-170 (176)
99 4frw_A Poliovirus receptor-rel 99.7 7.9E-16 2.7E-20 112.2 14.0 121 88-227 77-199 (218)
100 3grw_A Fibroblast growth facto 99.7 1.1E-15 3.6E-20 113.7 14.9 126 89-227 71-206 (241)
101 3p2t_A Leukocyte immunoglobuli 99.7 1.4E-16 4.8E-21 115.0 9.8 121 88-227 56-179 (196)
102 1jbj_A CD3 epsilon and gamma e 99.7 1.6E-16 5.6E-21 113.9 9.8 141 71-233 29-183 (186)
103 3bp6_B Programmed cell death 1 99.7 5.6E-16 1.9E-20 112.3 12.7 117 88-228 65-182 (202)
104 2v9r_A Roundabout homolog 1; p 99.7 1.1E-15 3.9E-20 111.3 14.3 121 92-235 74-201 (212)
105 2d3v_A Leukocyte immunoglobuli 99.7 2.6E-16 9E-21 113.6 10.7 122 88-227 56-180 (196)
106 2ghw_B Anti-SARS SCFV antibody 99.7 2.5E-15 8.6E-20 112.3 16.4 148 77-234 68-240 (247)
107 3umt_A SCFV heavy chain and li 99.7 6.1E-15 2.1E-19 110.8 18.5 155 76-235 67-244 (256)
108 1nqb_A Single-chain antibody f 99.7 2.1E-15 7.2E-20 113.5 15.9 144 76-235 65-232 (256)
109 1vca_A VCAM-D1,2, human vascul 99.7 3.2E-15 1.1E-19 108.5 16.1 125 88-227 52-178 (202)
110 3uzq_A Anti-dengue MAB 4E11; d 99.7 2.9E-15 1E-19 112.4 16.4 155 76-235 66-243 (253)
111 1nbq_A JAM, junctional adhesio 99.7 6.4E-17 2.2E-21 117.6 7.0 120 90-229 68-197 (209)
112 4i0k_A CD276 antigen; immunogl 99.7 1.9E-16 6.3E-21 116.4 9.5 122 89-227 71-194 (222)
113 1oll_A NK receptor; immune sys 99.7 7.5E-16 2.6E-20 110.5 12.5 115 88-226 55-172 (188)
114 1z7z_I Intercellular adhesion 99.7 1.9E-16 6.5E-21 128.4 10.3 115 89-235 326-448 (450)
115 1qz1_A Neural cell adhesion mo 99.7 1.9E-15 6.5E-20 115.4 15.0 118 88-227 60-179 (291)
116 3tv3_L PGT128 light chain, IG 99.7 8.4E-17 2.9E-21 117.5 7.0 139 77-227 57-199 (211)
117 2wqr_A IG epsilon chain C regi 99.7 4.2E-17 1.4E-21 126.8 5.7 131 90-228 178-309 (323)
118 2oz4_A Intercellular adhesion 99.7 7.8E-16 2.7E-20 116.3 12.4 116 88-235 140-263 (265)
119 2ny1_B T-cell surface glycopro 99.7 2.7E-16 9.3E-21 112.3 9.3 109 89-235 67-178 (184)
120 2p1y_A Bispecific alpha/beta T 99.7 5.1E-15 1.8E-19 109.9 16.5 144 77-234 61-236 (238)
121 2vr9_A Roundabout 1, ROBO; imm 99.7 1.3E-15 4.5E-20 111.5 12.7 116 92-227 71-194 (217)
122 3v2a_R Vascular endothelial gr 99.7 2.3E-15 7.9E-20 129.7 16.2 127 90-227 183-314 (772)
123 1lk3_L 9D7 light chain; antige 99.7 4.1E-16 1.4E-20 113.8 9.6 138 77-227 59-200 (210)
124 3d9a_L Light chain of hyhel10 99.7 3.5E-16 1.2E-20 114.3 9.3 138 77-227 60-201 (213)
125 1hnf_A CD2; T lymphocyte adhes 99.7 8.6E-15 3E-19 104.4 16.3 153 33-230 14-172 (182)
126 3auv_A SC-DSFV derived from th 99.7 7.9E-15 2.7E-19 111.5 17.0 157 76-235 70-253 (276)
127 3sbw_C Programmed cell death 1 99.7 2.9E-15 1E-19 109.9 14.1 120 88-227 78-199 (222)
128 3nl4_L Antigen binding fragmen 99.7 3.8E-16 1.3E-20 114.1 8.8 133 76-223 59-198 (213)
129 2gi7_A GPVI protein; IG-like d 99.7 9.6E-16 3.3E-20 109.6 10.7 145 45-227 21-168 (184)
130 1uct_A Immunoglobulin alpha FC 99.7 1.1E-15 3.9E-20 112.2 11.3 112 91-225 65-179 (218)
131 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 4.6E-15 1.6E-19 111.6 14.7 156 75-235 61-247 (256)
132 1moe_A Anti-CEA MAB T84.66; an 99.6 1.1E-14 3.6E-19 108.3 16.4 146 77-235 64-239 (240)
133 1f3r_B FV antibody fragment; I 99.6 1.9E-15 6.5E-20 113.7 12.2 149 76-234 64-243 (257)
134 3s97_C Contactin-1; carbonic a 99.6 1.9E-15 6.4E-20 109.1 11.7 128 89-234 65-199 (201)
135 3ry4_A Low affinity immunoglob 99.6 9E-16 3.1E-20 108.1 9.8 141 45-227 18-158 (170)
136 3juy_B 3B3 single chain varian 99.6 5.5E-15 1.9E-19 111.1 14.6 149 77-234 72-255 (256)
137 2znx_A SCFV; fluorotryptohpan, 99.6 2.2E-14 7.4E-19 107.0 17.7 156 76-234 59-233 (242)
138 3gkz_A Anti-methamphetamine si 99.6 3.3E-14 1.1E-18 106.9 18.8 154 77-235 73-248 (257)
139 1z7z_I Intercellular adhesion 99.6 7.5E-15 2.6E-19 119.0 16.2 171 34-227 48-270 (450)
140 3r06_A Anti-mouse CD3epsilon a 99.6 4.8E-16 1.6E-20 113.5 8.3 138 76-227 59-201 (213)
141 3ux9_B SCFV antibody; five hel 99.6 1.2E-14 3.9E-19 109.3 15.9 146 77-225 63-235 (256)
142 1iga_A IGA1; immunoglobulin; N 99.6 8.1E-15 2.8E-19 119.8 16.1 129 90-227 309-442 (475)
143 2fbj_H IGA-kappa J539 FAB (hea 99.6 2E-15 7E-20 111.0 11.2 146 76-233 65-215 (220)
144 2wim_A N-CAM 2, NCAM2, neural 99.6 1E-14 3.5E-19 111.4 15.5 117 89-227 59-177 (291)
145 2if7_A SLAM family member 6; N 99.6 5.8E-15 2E-19 106.4 13.0 111 89-229 69-182 (193)
146 3sob_L Antibody light chain; b 99.6 1.1E-15 3.6E-20 113.4 9.2 137 76-227 82-224 (237)
147 3mj6_A Junctional adhesion mol 99.6 1.2E-14 4.3E-19 109.7 15.2 139 77-234 71-235 (268)
148 1qok_A MFE-23 recombinant anti 99.6 1.5E-14 5.2E-19 110.3 15.7 153 77-235 92-267 (282)
149 3m8o_H Immunoglobulin A1 heavy 99.6 2E-14 6.7E-19 105.7 15.5 145 76-234 67-218 (221)
150 1dr9_A B7-1 (CD80), T lymphocy 99.6 2.1E-14 7.3E-19 103.8 14.9 123 88-230 63-192 (201)
151 2xzc_L FAB A.17 light chain; i 99.6 1.2E-15 4.3E-20 111.6 8.3 136 77-227 61-203 (216)
152 3knb_A Titin; IG-like, titin, 99.6 4.7E-15 1.6E-19 95.2 9.7 84 145-234 11-97 (100)
153 4fmk_A Poliovirus receptor-rel 99.6 3.6E-15 1.2E-19 109.2 10.4 123 88-227 81-205 (225)
154 2zg1_A Sialic acid-binding IG- 99.6 1.9E-15 6.5E-20 110.4 8.6 127 76-227 68-201 (214)
155 1svz_A Immunoglobulin;, single 99.6 7.3E-15 2.5E-19 109.8 11.9 146 77-225 65-228 (247)
156 1nkr_A P58-CL42 KIR; inhibitor 99.6 1.3E-14 4.6E-19 105.0 12.6 117 88-225 61-183 (201)
157 3knb_B Obscurin-like protein 1 99.6 5.9E-15 2E-19 95.9 9.5 85 143-235 17-104 (107)
158 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 4.7E-15 1.6E-19 109.1 9.9 137 77-228 68-212 (222)
159 1q0x_L FAB 9B1, light chain; a 99.6 1.7E-15 5.7E-20 110.6 7.4 138 77-227 62-203 (212)
160 2ifg_A High affinity nerve gro 99.6 2.7E-15 9.4E-20 117.8 9.1 121 87-227 209-333 (347)
161 1igt_B IGG2A intact antibody - 99.6 1.4E-15 4.8E-20 123.2 7.1 126 90-226 305-432 (444)
162 2nzi_A Titin; IG-domain, FNIII 99.6 6.6E-14 2.2E-18 107.6 16.1 173 21-227 48-278 (305)
163 3d9a_H Heavy chain of hyhel10 99.6 2.1E-15 7.2E-20 110.0 7.2 138 76-228 64-203 (210)
164 1c1e_H Catalytic antibody 1E9 99.6 4E-15 1.4E-19 109.1 8.4 137 76-228 65-209 (219)
165 2gjj_A A21 single-chain antibo 99.6 1.2E-13 4.1E-18 104.4 16.6 157 76-235 69-257 (264)
166 3qhz_H Human monoclonal antibo 99.6 4E-14 1.4E-18 104.9 13.6 138 77-227 70-217 (232)
167 3s96_B 3B5H10 FAB light chain; 99.6 2.4E-15 8.1E-20 110.2 6.9 138 77-227 64-208 (218)
168 3pv7_A B7-H6, IG-like domain-c 99.6 7.8E-15 2.7E-19 109.7 9.7 124 88-227 80-212 (248)
169 3oq3_B IFN-alpha/beta binding 99.6 8E-15 2.7E-19 114.2 9.9 116 88-225 87-204 (329)
170 3ejj_X Macrophage colony-stimu 99.6 2.8E-14 9.7E-19 108.8 12.7 125 88-234 49-179 (289)
171 2wng_A Tyrosine-protein phosph 99.6 1.7E-14 6E-19 112.1 11.7 125 88-228 72-205 (327)
172 3eow_R Poliovirus receptor; im 99.6 2.4E-14 8.2E-19 105.1 11.5 140 76-234 61-208 (221)
173 3rjd_A High affinity immunoglo 99.6 2.2E-14 7.4E-19 107.8 11.4 140 45-227 15-155 (262)
174 1p6f_A NKP46, natural cytotoxi 99.6 2.6E-14 8.9E-19 106.6 11.5 114 88-225 58-174 (242)
175 3fku_X Neutralizing antibody F 99.6 3.2E-14 1.1E-18 108.5 12.2 148 76-226 65-234 (280)
176 1ry7_B FGFR-3, fibroblast grow 99.6 1.6E-15 5.5E-20 118.2 4.8 131 89-227 60-204 (334)
177 1ccz_A Protein (CD58); LFA-3, 99.6 2E-14 6.9E-19 101.5 10.0 104 88-229 58-161 (171)
178 2dru_A Chimera of CD48 antigen 99.6 2.8E-14 9.6E-19 101.6 10.7 114 77-231 60-173 (180)
179 4dkd_C Macrophage colony-stimu 99.6 5.2E-15 1.8E-19 113.0 7.4 118 88-227 49-168 (292)
180 2o26_X MAST/stem cell growth f 99.6 2.2E-14 7.4E-19 109.6 10.6 112 90-227 57-170 (290)
181 2y23_A Myomesin; structural pr 99.6 1.4E-13 4.9E-18 105.9 15.2 132 89-227 57-190 (312)
182 1nfd_E H57 FAB; complex (immun 99.6 1.5E-15 5.2E-20 110.8 3.8 138 77-227 58-200 (212)
183 2j6e_L IGM, FAB light chain; a 99.6 9.3E-16 3.2E-20 113.6 2.6 139 77-227 80-223 (234)
184 3o4o_C Interleukin-1 receptor 99.6 2.2E-14 7.6E-19 112.0 10.3 119 89-227 80-204 (339)
185 3bkj_L WO2 IGG2A FAB fragment 99.5 4.8E-15 1.6E-19 111.2 6.1 137 77-227 98-239 (252)
186 2gki_A Nuclease; anti-DNA anti 99.5 4.5E-14 1.5E-18 108.2 11.6 155 77-234 88-270 (291)
187 2pet_A Lutheran blood group gl 99.5 5.3E-14 1.8E-18 103.7 11.5 123 90-225 77-211 (231)
188 2jll_A NCAM2, neural cell adhe 99.5 5.2E-13 1.8E-17 106.0 18.0 180 22-227 51-276 (389)
189 3omz_A Human vdelta1 gamma del 99.5 2.2E-13 7.6E-18 102.5 15.0 136 87-224 76-230 (259)
190 1dee_B IGM RF 2A2; FAB-IBP com 99.5 3.8E-14 1.3E-18 104.4 10.5 140 76-228 65-216 (223)
191 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 1.4E-13 4.9E-18 104.1 13.5 154 76-234 78-267 (268)
192 2y25_A Myomesin; structural pr 99.5 7.3E-15 2.5E-19 113.5 6.4 119 88-227 59-188 (317)
193 4dzb_B Vbeta2 (MAIT T cell rec 99.5 2.7E-14 9.4E-19 106.5 8.7 144 77-227 65-219 (246)
194 4ei6_B Vbeta16 XV19 type II na 99.5 1.3E-13 4.3E-18 102.9 12.1 143 77-226 64-217 (245)
195 3vh8_G Killer cell immunoglobu 99.5 1.3E-14 4.3E-19 112.4 6.8 155 45-227 37-198 (316)
196 4fom_A Poliovirus receptor-rel 99.5 3.4E-14 1.2E-18 109.4 9.1 122 88-227 72-196 (308)
197 1op3_H FAB 2G12, heavy chain; 99.5 3.4E-14 1.2E-18 104.8 8.6 137 76-227 65-213 (225)
198 3q5y_A TCR N15 beta; IG, T cel 99.5 7.1E-14 2.4E-18 103.9 10.3 143 77-226 63-211 (240)
199 4dep_C Interleukin-1 receptor 99.5 1.4E-13 4.9E-18 107.8 12.6 116 89-226 78-200 (349)
200 3nfj_J T cell receptor beta ch 99.5 4.6E-14 1.6E-18 105.3 9.2 144 77-227 62-218 (245)
201 3bae_H WO2 IGG2A FAB fragment 99.5 6.9E-14 2.3E-18 103.3 9.9 137 77-228 67-215 (228)
202 1dn0_B IGM-kappa cold agglutin 99.5 1.6E-13 5.5E-18 101.6 11.9 140 76-228 64-216 (232)
203 4fqp_A Poliovirus receptor; im 99.5 3.8E-13 1.3E-17 103.9 14.4 122 88-227 77-201 (313)
204 1b6u_A KIR2DL3, P58 killer cel 99.5 8.2E-14 2.8E-18 104.7 10.2 117 88-225 60-182 (257)
205 3pl6_D MBP peptide / T-cell re 99.5 1.8E-13 6E-18 103.5 11.8 143 77-226 88-239 (268)
206 3bqu_C 3H6 FAB light chain; be 99.5 1.7E-15 5.9E-20 112.1 0.6 127 89-227 92-223 (233)
207 1mju_H Immunoglobulin MS6-12; 99.5 1.6E-13 5.5E-18 101.3 11.2 137 76-227 65-205 (227)
208 3u83_A Poliovirus receptor-rel 99.5 3.9E-13 1.3E-17 104.5 13.8 133 76-227 79-218 (331)
209 2cqv_A MLCK, myosin light chai 99.5 5.3E-13 1.8E-17 87.6 12.4 84 144-235 12-98 (114)
210 1pz5_B Heavy chain of FAB (SYA 99.5 5.6E-14 1.9E-18 103.1 8.3 138 76-228 67-210 (220)
211 3liz_H 4C3 monoclonal antibody 99.5 2.4E-13 8.2E-18 102.0 11.9 137 77-228 66-209 (253)
212 3nl4_H Antigen binding fragmen 99.5 5.4E-14 1.8E-18 102.9 8.0 134 76-228 63-203 (215)
213 1g1c_A Immunoglobulin-like dom 99.5 3.4E-13 1.1E-17 86.2 10.6 85 144-235 10-97 (99)
214 1za6_B IGG heavy chain; immuno 99.5 4.2E-14 1.4E-18 110.8 7.4 140 76-228 65-206 (344)
215 1hxm_B Gamma-delta T-cell rece 99.5 3.6E-13 1.2E-17 100.3 11.2 143 75-227 65-217 (242)
216 1gxe_A Myosin binding protein 99.5 1.4E-13 4.7E-18 93.5 8.1 84 146-236 25-139 (139)
217 2kdg_A Myotilin; immonoglobuli 99.5 5.4E-13 1.8E-17 85.4 10.2 84 145-235 11-97 (100)
218 2edj_A Roundabout homolog 2; K 99.5 6.3E-13 2.2E-17 85.1 10.5 82 144-235 13-97 (100)
219 1u2h_A APEG-1, aortic preferen 99.5 5.7E-13 1.9E-17 85.1 10.1 83 146-235 12-97 (99)
220 3o3u_N Maltose-binding peripla 99.5 1.3E-12 4.4E-17 109.3 14.8 123 89-227 431-565 (581)
221 3tv3_H PGT128 heavy chain, IG 99.5 5.8E-13 2E-17 99.1 11.2 139 76-227 72-225 (239)
222 3cx2_A Myosin-binding protein 99.5 1.4E-12 4.9E-17 84.7 11.7 94 142-235 7-107 (108)
223 2vol_A Murine IGG FC; FC, zinc 99.5 7.1E-14 2.4E-18 101.7 6.1 127 90-227 68-196 (207)
224 3qib_D 2B4 beta chain; IG doma 99.5 4E-13 1.4E-17 101.7 10.3 141 78-226 90-242 (270)
225 3n9g_H FAB fragment of MAB CR4 99.5 3.6E-13 1.2E-17 99.6 9.6 139 76-227 65-213 (230)
226 1waa_A Titin; metal binding pr 99.5 9.8E-13 3.3E-17 83.0 10.2 83 143-235 9-91 (93)
227 3u2s_H PG9 heavy chain; greek 99.4 9.8E-13 3.4E-17 98.4 11.9 139 76-227 64-226 (248)
228 3qp3_A Titin; I-SET IG-like, s 99.4 1.1E-12 3.8E-17 84.4 10.6 82 145-234 14-98 (103)
229 1itb_B Type 1 interleukin-1 re 99.4 8.7E-14 3E-18 107.5 6.1 115 90-228 62-188 (315)
230 1gsm_A Madcam-1, mucosal addre 99.4 1E-12 3.6E-17 95.1 11.3 125 88-227 57-193 (210)
231 2bk8_A Connectin, M1, titin he 99.4 2.8E-12 9.6E-17 81.6 12.1 83 146-235 8-93 (97)
232 3caf_A Fibroblast growth facto 99.4 6.5E-13 2.2E-17 85.0 8.9 81 147-234 16-99 (100)
233 1wit_A Twitchin 18TH IGSF modu 99.4 3.6E-13 1.2E-17 85.1 7.5 72 146-227 9-82 (93)
234 3kvq_A Vascular endothelial gr 99.4 5.4E-13 1.8E-17 86.6 8.5 82 143-234 14-98 (108)
235 1c5d_H Monoclonal antibody aga 99.4 7.8E-13 2.7E-17 96.7 10.2 136 76-228 64-205 (215)
236 3sob_H Antibody heavy chain, l 99.4 1.6E-12 5.4E-17 97.7 12.1 139 76-227 88-239 (256)
237 1nct_A Titin; cell adhesion, g 99.4 4.9E-13 1.7E-17 86.6 8.1 85 143-235 18-105 (106)
238 2xqy_G A13-D6.3 monoclonal ant 99.4 6.8E-13 2.3E-17 100.0 10.0 137 76-227 71-213 (261)
239 2kkq_A Myotilin; unknown funct 99.4 1.4E-12 4.7E-17 86.0 10.3 87 142-234 18-107 (116)
240 1wwb_X Protein (brain derived 99.4 1.6E-12 5.5E-17 83.7 10.2 80 153-235 15-97 (103)
241 2yuz_A Myosin-binding protein 99.4 2.2E-12 7.5E-17 82.6 10.8 83 143-235 11-94 (100)
242 2e7c_A Myosin-binding protein 99.4 3.4E-12 1.2E-16 84.3 12.0 81 146-235 31-114 (118)
243 2wbj_D OB TCR; transmembrane, 99.4 4.1E-12 1.4E-16 96.6 13.9 145 76-227 87-244 (279)
244 3puc_A Titin; I-SET IG-like do 99.4 2E-12 7E-17 82.4 10.4 75 145-227 12-86 (99)
245 1zvo_C Myeloma immunoglobulin 99.4 1.2E-11 4.2E-16 102.0 17.7 128 90-227 361-491 (512)
246 3irg_A Titin; IG-like, titin, 99.4 1.6E-12 5.5E-17 83.0 9.8 76 146-227 12-87 (100)
247 2dm2_A Palladin; beta-sandwich 99.4 1.6E-12 5.5E-17 84.7 9.9 79 144-228 13-91 (110)
248 3bn9_D E2 FAB heavy chain; ant 99.4 3.7E-13 1.2E-17 101.2 7.6 137 76-227 65-218 (257)
249 2lu7_A Obscurin-like protein 1 99.4 1.9E-12 6.4E-17 80.0 9.5 78 148-235 5-82 (84)
250 3bfo_A Mucosa-associated lymph 99.4 1.5E-12 5.3E-17 81.8 9.3 73 146-235 10-86 (91)
251 1ypz_F T-cell receptor gamma c 99.4 8E-13 2.7E-17 97.7 9.0 144 75-227 64-215 (230)
252 3mlr_H Human monoclonal anti-H 99.4 7.2E-13 2.5E-17 97.7 8.7 139 77-228 66-215 (226)
253 1bec_A 14.3.D T cell antigen r 99.4 4.4E-13 1.5E-17 99.6 7.3 144 76-226 59-210 (238)
254 3irg_B Obscurin-like protein 1 99.4 2.4E-12 8.4E-17 83.3 9.5 83 145-235 19-104 (107)
255 1hzh_H IGG, immunoglobulin hea 99.4 1.2E-12 4E-17 106.5 9.6 138 76-228 65-218 (457)
256 3s35_X Vascular endothelial gr 99.4 2.4E-12 8.2E-17 85.5 9.1 89 147-235 16-109 (122)
257 3to4_D NKT vbeta2 (mouse varia 99.4 9.1E-13 3.1E-17 98.8 7.8 139 78-226 65-217 (253)
258 2rgs_A I, IG gamma-2B heavy ch 99.4 3.5E-13 1.2E-17 98.8 5.1 127 89-227 75-204 (218)
259 2ckn_A Basic fibroblast growth 99.4 3E-12 1E-16 81.1 8.6 70 145-227 15-84 (95)
260 2yr3_A Myosin light chain kina 99.4 1.2E-12 4.2E-17 83.6 6.8 73 145-228 17-89 (99)
261 2eo9_A Roundabout homolog 1; b 99.4 2.3E-12 7.9E-17 85.1 8.2 74 144-227 13-86 (118)
262 1he7_A High affinity nerve gro 99.4 3.4E-12 1.2E-16 84.5 8.6 72 153-227 14-87 (126)
263 2dav_A SLOW MYBP-C, myosin-bin 99.4 7.8E-12 2.7E-16 82.8 10.1 86 142-227 10-99 (126)
264 2c1o_A IGK-C protein; FAB frag 99.4 3.8E-12 1.3E-16 95.3 9.6 113 97-227 11-137 (254)
265 1oga_E TRBC1, T-cell receptor 99.4 1E-11 3.6E-16 93.0 11.9 145 76-227 63-217 (252)
266 3iu4_H CHP3 FAB heavy chain; a 99.3 8.5E-13 2.9E-17 99.6 5.8 139 76-227 64-212 (263)
267 2dm3_A KIAA0992 protein, palla 99.3 1.7E-12 5.7E-17 84.6 6.4 84 144-234 14-100 (110)
268 2e6p_A Obscurin-like protein 1 99.3 1.2E-11 4.2E-16 79.6 10.4 76 149-234 20-95 (104)
269 1fhg_A Telokin; immunoglobulin 99.3 1.2E-11 4.1E-16 85.6 10.8 75 146-227 48-122 (154)
270 2lvc_A Obscurin-like protein 1 99.3 5.1E-12 1.7E-16 79.3 7.9 74 150-233 17-90 (91)
271 3rbs_A Myomesin-1; immunoglobu 99.3 1.3E-11 4.5E-16 89.7 11.0 105 18-122 43-204 (207)
272 2edn_A Myosin-binding protein 99.3 6.1E-12 2.1E-16 82.4 8.2 86 142-227 15-104 (118)
273 1ypz_E T cell receptor delta, 99.3 4E-11 1.4E-15 87.1 13.4 165 33-227 16-197 (207)
274 1igy_B IGG1 intact antibody MA 99.3 6.2E-13 2.1E-17 107.4 4.1 138 76-228 64-204 (434)
275 2dlt_A Myosin binding protein 99.3 8.3E-12 2.8E-16 80.7 8.4 83 143-234 12-95 (106)
276 2eny_A Obscurin; beta-sandwich 99.3 6.1E-12 2.1E-16 81.1 7.5 85 142-234 11-95 (104)
277 1i1c_A IGG2A, IG gamma-2A chai 99.3 2E-12 7E-17 96.1 5.7 128 89-227 81-210 (239)
278 2ens_A Advanced glycosylation 99.3 3.6E-12 1.2E-16 80.9 5.8 73 146-235 17-94 (96)
279 3so5_A LIG-3, leucine-rich rep 99.3 4.7E-11 1.6E-15 77.6 11.3 84 145-228 16-101 (112)
280 3m45_A Cell adhesion molecule 99.3 5.2E-11 1.8E-15 77.0 11.4 89 142-235 9-105 (108)
281 2edf_A Obscurin; beta-sandwich 99.3 1.9E-11 6.6E-16 78.5 9.2 82 144-235 13-94 (103)
282 1x44_A Myosin-binding protein 99.3 3.4E-11 1.2E-15 77.4 10.2 84 144-235 12-95 (103)
283 2w59_A IGY FCU3-4; immunoglobu 99.3 1.5E-11 5E-16 91.0 9.3 130 90-227 77-216 (231)
284 2v9t_A Roundabout homolog 1; s 99.3 6.5E-12 2.2E-16 82.7 6.6 81 145-227 15-96 (117)
285 2wqr_A IG epsilon chain C regi 99.3 1.4E-12 4.8E-17 101.2 3.8 126 90-227 72-202 (323)
286 2e6q_A Obscurin-like protein 1 99.3 2.9E-11 9.9E-16 78.6 9.3 87 142-235 11-104 (112)
287 3mjg_X Beta-type platelet-deri 99.3 1.9E-11 6.6E-16 93.1 9.7 111 89-227 50-165 (289)
288 2k1m_A Myosin-binding protein 99.3 8E-11 2.7E-15 74.4 10.9 82 144-235 13-94 (95)
289 4hwu_A Fibroblast growth facto 99.3 2.7E-11 9.3E-16 76.6 8.7 76 146-235 8-86 (95)
290 1gl4_B Basement membrane-speci 99.3 5E-11 1.7E-15 75.8 9.7 76 146-234 17-96 (98)
291 3qr2_A Basigin; CD147, EMMPRIN 99.2 1.8E-11 6.2E-16 83.0 7.1 85 142-228 24-115 (137)
292 4fa8_A Secreted protein BARF1; 99.2 1E-10 3.6E-15 84.6 11.3 98 24-123 59-199 (203)
293 2edk_A Myosin-binding protein 99.2 1.1E-11 3.8E-16 79.4 5.5 84 144-234 13-97 (101)
294 1ow0_A IG alpha-1 chain C regi 99.2 1.2E-12 4E-17 95.8 0.8 130 89-227 65-199 (214)
295 3mj6_A Junctional adhesion mol 99.2 4.9E-11 1.7E-15 89.8 9.7 102 23-124 71-236 (268)
296 2cpc_A KIAA0657 protein; immun 99.2 1.9E-10 6.4E-15 75.1 11.2 77 149-235 23-99 (113)
297 2aty_A Complement receptor chi 99.2 8.7E-11 3E-15 93.1 11.3 129 89-227 232-361 (376)
298 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.5E-10 5.2E-15 74.5 10.1 79 148-235 25-103 (104)
299 2cr3_A Basic fibroblast growth 99.2 1.7E-11 5.8E-16 78.3 5.3 67 148-227 12-78 (99)
300 2yuv_A Myosin-binding protein 99.2 1.9E-10 6.4E-15 73.4 10.2 77 149-235 18-94 (100)
301 3jz7_A MCAR, CAR, coxsackievir 99.2 7.2E-11 2.4E-15 85.6 9.2 124 1-124 36-211 (214)
302 3u1s_H FAB PGT145 heavy chain; 99.2 2.3E-11 7.9E-16 91.9 6.6 138 76-227 88-253 (267)
303 3mtr_A N-CAM-1, NCAM-1, neural 99.2 1.9E-10 6.4E-15 83.9 11.2 80 142-227 21-100 (215)
304 1iam_A ICAM-1, CD54, intercell 99.2 1.2E-09 4E-14 77.4 14.8 114 89-227 49-166 (185)
305 2ny1_B T-cell surface glycopro 99.2 1.5E-10 5.1E-15 82.3 10.2 86 34-124 66-178 (184)
306 2cry_A KIN of IRRE-like protei 99.2 1E-12 3.5E-17 87.3 -1.4 81 146-228 20-102 (122)
307 2oz4_A Intercellular adhesion 99.2 7E-11 2.4E-15 89.0 7.8 104 91-227 57-167 (265)
308 1l6x_A Immunoglobulin gamma-1 99.2 1.1E-11 3.7E-16 90.1 2.8 118 99-227 77-196 (207)
309 1wwc_A Protein (NT-3 growth fa 99.2 2.7E-10 9.3E-15 75.0 9.3 69 155-227 21-89 (118)
310 3rbg_A Cytotoxic and regulator 99.1 3.8E-10 1.3E-14 75.0 9.8 84 146-234 8-99 (124)
311 2e7b_A Obscurin; IG-like domai 99.1 4E-10 1.4E-14 72.2 9.6 73 144-225 13-85 (103)
312 2r15_A Myomesin-1; sarcomeric 99.1 6.4E-10 2.2E-14 80.6 11.5 104 18-124 43-209 (212)
313 2dku_A KIAA1556 protein; beta- 99.1 1.1E-09 3.8E-14 70.1 11.4 82 144-235 13-94 (103)
314 1hng_A CD2; T lymphocyte adhes 99.1 1.3E-10 4.4E-15 82.2 7.5 104 1-116 30-166 (176)
315 2j8h_A Titin, connectin; cardi 99.1 6.4E-10 2.2E-14 79.7 11.2 78 144-227 9-86 (197)
316 2dm7_A KIAA1556 protein; beta- 99.1 2.9E-10 9.9E-15 73.6 8.4 72 145-226 14-85 (108)
317 2yd1_A Tyrosine-protein phosph 99.1 1.3E-09 4.5E-14 79.1 12.8 81 142-228 9-90 (212)
318 2edh_A Obscurin; structural ge 99.1 6.4E-10 2.2E-14 72.6 10.0 81 144-235 24-104 (113)
319 2eo1_A OBSCN protein, cDNA FLJ 99.1 3.5E-10 1.2E-14 72.4 8.3 79 147-235 19-97 (102)
320 4f9l_D 20.1 anti-BTN3A1 antibo 99.1 1.8E-09 6.2E-14 78.8 12.5 177 1-223 33-230 (259)
321 2cr6_A KIAA1556 protein, obscu 99.1 1.7E-10 5.6E-15 75.7 6.3 84 144-235 18-101 (115)
322 3lcy_A Titin; A-BAND, IG tande 99.1 1.6E-09 5.3E-14 77.5 11.8 76 144-227 12-87 (197)
323 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 3E-09 1E-13 79.6 13.6 57 1-57 35-97 (256)
324 2a38_A Titin; Z1Z2, structural 99.1 6.6E-10 2.3E-14 79.3 9.1 78 144-227 10-87 (194)
325 1xau_A B- and T-lymphocyte att 99.1 1.8E-09 6.1E-14 67.8 9.7 87 146-235 21-115 (122)
326 4frw_A Poliovirus receptor-rel 99.1 1.6E-09 5.6E-14 78.4 11.1 103 22-124 64-210 (218)
327 1jhl_L IGG1-kappa D11.15 FV (l 99.1 4.6E-09 1.6E-13 67.9 11.8 84 146-234 8-106 (108)
328 2p1y_A Bispecific alpha/beta T 99.1 3.5E-09 1.2E-13 78.2 12.6 36 22-58 60-95 (238)
329 3mtr_A N-CAM-1, NCAM-1, neural 99.1 1.3E-08 4.6E-13 73.9 15.5 119 88-227 74-197 (215)
330 3grw_A Fibroblast growth facto 99.1 1.1E-09 3.9E-14 80.9 9.9 76 145-227 21-96 (241)
331 2yd6_A PTPRD protein; hydrolas 99.1 2E-09 6.7E-14 78.2 11.0 76 145-227 12-88 (212)
332 2iep_A Muscle-specific kinase 99.0 1.5E-09 5.1E-14 77.4 10.0 75 145-228 13-87 (192)
333 1rhf_A Tyrosine-protein kinase 99.0 3E-09 1E-13 75.1 11.3 76 146-227 9-84 (182)
334 1z9m_A GAPA225; nectin-like, I 99.0 1.7E-09 5.9E-14 73.8 9.6 87 144-235 43-137 (145)
335 4fmk_A Poliovirus receptor-rel 99.0 7.7E-10 2.6E-14 80.5 8.3 83 32-114 79-205 (225)
336 2c5d_C AXL oncogene, tyrosine- 99.0 1E-09 3.4E-14 78.6 8.6 82 143-227 6-92 (195)
337 3r08_E T-cell surface glycopro 99.0 1.7E-10 5.7E-15 70.2 3.7 59 147-224 7-66 (82)
338 3ux9_B SCFV antibody; five hel 99.0 1.5E-09 5.3E-14 81.1 9.9 35 21-57 61-95 (256)
339 1hxm_A Gamma-delta T-cell rece 99.0 1.6E-09 5.5E-14 79.9 9.6 128 76-227 61-198 (229)
340 3f8u_B Tapasin; endoplasmic re 99.0 1.4E-09 5E-14 85.6 9.7 125 88-226 252-388 (401)
341 3ojm_B Fibroblast growth facto 99.0 1.5E-09 5.1E-14 79.6 9.2 75 146-227 26-100 (231)
342 4acp_A IG gamma-1 chain C regi 99.0 1E-10 3.5E-15 86.9 2.8 127 90-226 89-216 (240)
343 2va4_A NCAM2, N-CAM 2, neural 99.0 1.1E-09 3.7E-14 78.0 8.0 70 148-227 13-82 (192)
344 3bn3_B ICAM-5, intercellular a 99.0 3.6E-09 1.2E-13 75.5 10.5 119 91-227 53-174 (196)
345 2id5_A Lingo-1, leucine rich r 99.0 4.9E-10 1.7E-14 91.5 6.2 82 146-235 392-476 (477)
346 2wv3_A Neuroplastin; igcam, me 99.0 1.5E-09 5E-14 77.4 7.8 72 144-227 7-79 (190)
347 2zg1_A Sialic acid-binding IG- 99.0 1.2E-09 4.1E-14 79.3 7.2 92 21-113 67-200 (214)
348 3khq_A B-cell antigen receptor 99.0 6.2E-09 2.1E-13 70.0 9.5 84 145-235 23-116 (133)
349 3shs_A HOC head outer capsid p 98.9 9.7E-08 3.3E-12 70.6 16.2 150 42-227 13-169 (304)
350 3omz_A Human vdelta1 gamma del 98.9 6.4E-09 2.2E-13 77.9 10.4 34 24-57 67-100 (259)
351 2v44_A NCAM2, neural cell adhe 98.9 1.1E-08 3.8E-13 72.6 11.2 74 146-228 9-83 (189)
352 1mq8_A ICAM-1, intercellular a 98.9 1.7E-09 5.7E-14 82.4 6.8 102 71-184 121-234 (291)
353 3k0w_A Mucosa-associated lymph 98.9 4.9E-09 1.7E-13 76.5 9.1 67 144-227 23-89 (218)
354 2q20_A VK1 O18/O8 germline lig 98.9 2.5E-08 8.6E-13 64.5 11.4 84 146-234 10-108 (109)
355 3bp6_B Programmed cell death 1 98.9 3.8E-09 1.3E-13 76.0 8.1 79 147-227 10-91 (202)
356 1epf_A NCAM, protein (neural c 98.9 7E-09 2.4E-13 73.8 9.4 77 146-227 9-86 (191)
357 3uto_A Twitchin; kinase, muscl 98.9 7.8E-09 2.7E-13 86.2 11.0 82 145-234 488-572 (573)
358 2dru_A Chimera of CD48 antigen 98.9 1.3E-08 4.4E-13 72.1 10.5 84 23-116 60-171 (180)
359 3qib_D 2B4 beta chain; IG doma 98.9 1.9E-09 6.3E-14 81.4 6.5 105 97-225 3-123 (270)
360 3zyj_A Leucine-rich repeat-con 98.9 5E-09 1.7E-13 84.7 9.3 81 145-234 347-431 (440)
361 2vr9_A Roundabout 1, ROBO; imm 98.9 3.7E-09 1.3E-13 76.9 7.8 80 144-227 14-93 (217)
362 1h5b_A Murine T cell receptor 98.9 9.9E-09 3.4E-13 66.9 8.9 78 146-226 8-94 (113)
363 1pko_A Myelin oligodendrocyte 98.9 2.7E-08 9.3E-13 67.3 11.4 89 147-235 14-120 (139)
364 1sq2_N Novel antigen receptor; 98.9 1.4E-08 4.9E-13 66.1 9.6 78 146-224 7-87 (113)
365 4gjt_B Poliovirus receptor-rel 98.9 2.3E-09 7.8E-14 71.1 5.8 91 146-236 7-117 (123)
366 2e27_L Anti-ciguatoxin antibod 98.9 2.7E-08 9.3E-13 65.4 10.9 85 146-235 10-109 (119)
367 1eaj_A Coxsackie virus and ade 98.9 5.1E-09 1.7E-13 69.2 7.4 89 147-235 13-124 (126)
368 2v5t_A NCAM2, N-CAM 2, neural 98.9 6.3E-09 2.1E-13 73.8 8.3 74 145-227 8-81 (189)
369 4i0k_A CD276 antigen; immunogl 98.9 1E-08 3.6E-13 74.7 9.7 104 21-124 56-205 (222)
370 2v5y_A Receptor-type tyrosine- 98.9 3.4E-08 1.2E-12 84.9 14.2 139 69-228 106-248 (731)
371 1mqk_L Antibody 7E2 FV fragmen 98.9 4.3E-08 1.5E-12 64.6 11.6 85 146-235 8-108 (120)
372 2ywz_A NEW antigen receptor va 98.9 9.2E-09 3.1E-13 66.8 8.2 78 146-224 7-87 (111)
373 4f9p_D 103.2 anti-BTN3A1 antib 98.9 9.2E-07 3.1E-11 64.3 19.1 145 76-226 65-230 (254)
374 1qfw_M FV, antibody (anti beta 98.9 2.6E-08 8.8E-13 64.3 10.0 84 146-234 8-106 (108)
375 1fnl_A Low affinity immunoglob 98.9 9.9E-09 3.4E-13 72.2 8.6 72 146-234 14-86 (175)
376 1i8k_A Epidermal growth factor 98.9 3.7E-08 1.3E-12 63.4 10.5 84 146-234 8-106 (107)
377 2coq_A NEW antigen receptor va 98.9 1.2E-08 4.2E-13 65.9 8.2 78 146-224 7-87 (108)
378 3sgj_C Human FCG3A receptor; r 98.9 1E-08 3.5E-13 74.1 8.6 72 146-234 14-86 (204)
379 2v9r_A Roundabout homolog 1; p 98.9 4.5E-09 1.5E-13 76.0 6.7 82 144-227 14-96 (212)
380 4hwn_A FC receptor-like A; FCR 98.9 3.4E-09 1.2E-13 68.6 5.4 64 150-227 18-84 (108)
381 2d3v_A Leukocyte immunoglobuli 98.9 4E-09 1.4E-13 75.7 6.3 69 149-227 14-82 (196)
382 4gos_A V-SET domain-containing 98.9 4.5E-09 1.6E-13 69.8 6.0 80 148-227 14-108 (125)
383 2qsq_A Carcinoembryonic antige 98.9 1.1E-08 3.6E-13 66.4 7.6 78 150-235 11-108 (111)
384 4dzb_B Vbeta2 (MAIT T cell rec 98.9 2E-08 6.8E-13 74.6 10.1 77 146-226 8-100 (246)
385 3eow_R Poliovirus receptor; im 98.9 3.2E-08 1.1E-12 72.1 11.1 123 1-124 36-209 (221)
386 2xot_A Amphoterin-induced prot 98.9 7.6E-09 2.6E-13 81.5 8.2 72 146-227 253-325 (361)
387 1f2q_A High affinity immunoglo 98.8 4.8E-09 1.7E-13 73.9 6.3 72 146-234 11-83 (176)
388 3q0h_A T cell immunoreceptor w 98.8 1.6E-08 5.6E-13 66.3 8.1 84 146-235 10-107 (117)
389 1mq8_A ICAM-1, intercellular a 98.8 2.3E-08 7.9E-13 76.2 9.9 114 90-227 50-166 (291)
390 3p2t_A Leukocyte immunoglobuli 98.8 6.3E-09 2.2E-13 74.6 6.5 68 150-227 15-82 (196)
391 1f3r_B FV antibody fragment; I 98.8 3.7E-08 1.3E-12 73.7 11.0 78 148-226 9-101 (257)
392 3ry4_A Low affinity immunoglob 98.8 1.2E-08 4.3E-13 71.1 7.8 72 146-234 11-83 (170)
393 4f80_A Butyrophilin subfamily 98.8 2.8E-08 9.5E-13 72.8 10.0 80 148-227 13-107 (226)
394 2ghw_B Anti-SARS SCFV antibody 98.8 2.1E-08 7E-13 74.5 9.3 78 147-225 10-103 (247)
395 2vsd_A CHIR AB1; immune system 98.8 6.5E-09 2.2E-13 66.8 5.7 65 150-226 15-79 (105)
396 2aw2_A B and T lymphocyte atte 98.8 1.1E-07 3.8E-12 59.0 10.8 83 146-235 18-109 (120)
397 1i3g_L Antibody FV fragment; a 98.8 6.6E-08 2.3E-12 62.7 10.4 84 146-234 11-109 (111)
398 3gkz_A Anti-methamphetamine si 98.8 3.7E-08 1.3E-12 73.7 10.5 79 146-225 15-108 (257)
399 3nl4_L Antigen binding fragmen 98.8 4.1E-08 1.4E-12 71.1 10.4 77 146-227 8-95 (213)
400 3s96_B 3B5H10 FAB light chain; 98.8 3.6E-08 1.2E-12 71.6 9.9 76 148-227 9-99 (218)
401 2xt1_B Camelid VHH 9; viral pr 98.8 2.1E-07 7.3E-12 61.3 12.6 88 146-234 9-113 (121)
402 3sbw_C Programmed cell death 1 98.8 3.9E-08 1.3E-12 71.6 9.9 78 147-224 9-101 (222)
403 3moq_A NEW antigen receptor va 98.8 4E-08 1.4E-12 65.2 9.0 81 146-227 7-90 (126)
404 3udw_C Poliovirus receptor; PV 98.8 1.9E-08 6.5E-13 65.7 7.4 90 146-235 7-115 (118)
405 3juy_B 3B3 single chain varian 98.8 4.8E-08 1.6E-12 73.0 10.4 81 144-225 11-107 (256)
406 2gi7_A GPVI protein; IG-like d 98.8 1.2E-08 4.1E-13 72.4 6.7 60 149-227 17-76 (184)
407 1oll_A NK receptor; immune sys 98.8 3.1E-08 1.1E-12 70.5 8.8 68 150-227 14-81 (188)
408 3d9a_L Light chain of hyhel10 98.8 5.5E-08 1.9E-12 70.4 10.3 77 146-227 8-95 (213)
409 3zyi_A Leucine-rich repeat-con 98.8 1.1E-08 3.7E-13 83.1 7.2 80 146-235 359-442 (452)
410 3b5h_A Cervical EMMPRIN, HAB18 98.8 7.5E-08 2.6E-12 68.0 10.8 73 149-234 8-80 (184)
411 1vca_A VCAM-D1,2, human vascul 98.8 2.6E-08 8.9E-13 71.9 8.4 67 149-227 11-78 (202)
412 2ptt_A CD48 antigen; CD244, CD 98.8 1.9E-08 6.5E-13 65.1 7.0 83 147-236 11-108 (110)
413 3mj8_L Stimulatory hamster ant 98.8 6.7E-08 2.3E-12 70.0 10.6 75 148-227 9-94 (213)
414 1gsm_A Madcam-1, mucosal addre 98.8 1.6E-08 5.6E-13 73.0 7.2 75 148-234 16-93 (210)
415 1ccz_A Protein (CD58); LFA-3, 98.8 2.7E-08 9.1E-13 69.9 8.1 80 148-235 4-93 (171)
416 1c1e_H Catalytic antibody 1E9 98.8 2.9E-08 1E-12 72.3 8.6 80 146-226 7-102 (219)
417 1lk3_L 9D7 light chain; antige 98.8 9.4E-08 3.2E-12 69.1 11.3 77 146-227 7-94 (210)
418 1f97_A Junction adhesion molec 98.8 2.7E-08 9.3E-13 71.8 8.4 73 146-227 8-89 (212)
419 1nqb_A Single-chain antibody f 98.8 6.3E-08 2.2E-12 72.5 10.5 81 146-227 7-103 (256)
420 4ffy_L DENV1-E111 single chain 98.8 1.5E-07 5.3E-12 62.4 11.0 87 146-235 8-111 (126)
421 1jbj_A CD3 epsilon and gamma e 98.8 2.6E-08 8.8E-13 70.9 7.6 60 150-228 10-70 (186)
422 1q9r_B S25-2 FAB (IGG1K) heavy 98.7 5.9E-08 2E-12 70.8 9.6 78 148-226 9-104 (222)
423 1zox_A CLM-1; IG-superfamily, 98.7 2.1E-07 7.3E-12 60.4 11.3 89 145-235 7-109 (113)
424 3d9a_H Heavy chain of hyhel10 98.7 5E-08 1.7E-12 70.6 9.1 87 147-234 8-111 (210)
425 1j05_L T84.66 antibody, anti-C 98.7 1.1E-07 3.8E-12 61.6 9.8 86 146-234 8-110 (111)
426 3esu_F Antibody 14B7* light ch 98.7 1.3E-07 4.4E-12 70.3 11.4 77 146-227 11-98 (250)
427 1eeq_A Kappa-4 immunoglobulin 98.7 2E-07 6.7E-12 60.7 10.8 86 146-234 8-112 (114)
428 2yc1_B Single chain antibody f 98.7 1.9E-07 6.7E-12 63.5 11.1 85 146-235 23-122 (146)
429 1ncn_A T lymphocyte activation 98.7 5.1E-08 1.7E-12 63.1 7.9 74 149-227 4-93 (110)
430 1ugn_A LIR1, leukocyte immunog 98.7 1.2E-08 4E-13 73.3 5.2 68 149-226 14-81 (198)
431 3nfj_J T cell receptor beta ch 98.7 6.3E-08 2.2E-12 71.8 9.3 75 146-224 8-95 (245)
432 3r06_A Anti-mouse CD3epsilon a 98.7 1.4E-07 4.7E-12 68.3 10.8 84 146-234 8-106 (213)
433 2fbo_J V1V2;, variable region- 98.7 2.2E-08 7.4E-13 74.3 6.6 78 146-227 9-114 (250)
434 1n4x_H Immunoglobulin heavy ch 98.7 1.8E-07 6.2E-12 61.5 10.3 79 146-225 7-101 (120)
435 1moe_A Anti-CEA MAB T84.66; an 98.7 7.3E-08 2.5E-12 71.1 9.4 86 146-234 8-110 (240)
436 1pz5_B Heavy chain of FAB (SYA 98.7 1.1E-07 3.7E-12 69.3 10.1 79 147-226 8-104 (220)
437 1uct_A Immunoglobulin alpha FC 98.7 2E-08 6.7E-13 73.4 6.0 69 149-227 18-88 (218)
438 1mfa_H IGG1-lambda Se155-4 FAB 98.7 1.9E-07 6.6E-12 61.4 10.3 79 146-225 7-101 (120)
439 2if7_A SLAM family member 6; N 98.7 6.6E-08 2.3E-12 69.2 8.7 74 147-227 6-94 (193)
440 1pew_A JTO2, A lambda-6 type i 98.7 1.2E-07 4E-12 61.3 9.1 88 146-235 7-108 (109)
441 1kxv_C Camelid VHH domain CAB1 98.7 2.6E-07 8.8E-12 60.9 10.7 78 147-225 8-100 (121)
442 3uzq_A Anti-dengue MAB 4E11; d 98.7 9E-08 3.1E-12 71.4 9.5 89 146-235 8-116 (253)
443 3s97_C Contactin-1; carbonic a 98.7 1.1E-08 3.6E-13 73.3 4.3 75 146-227 15-90 (201)
444 1zxq_A ICAM-2, intercellular a 98.7 1.6E-07 5.4E-12 66.5 10.1 118 90-226 52-172 (192)
445 3t0v_A Immunoglobulin variable 98.7 2.7E-07 9.2E-12 61.0 10.7 87 146-235 7-110 (123)
446 3nl4_H Antigen binding fragmen 98.7 1.1E-07 3.8E-12 69.0 9.7 76 147-225 7-97 (215)
447 3umt_A SCFV heavy chain and li 98.7 8.8E-08 3E-12 71.6 9.2 89 146-235 9-120 (256)
448 1a2y_B IGG1-kappa D1.3 FV (hea 98.7 2.3E-07 7.8E-12 60.6 10.1 86 148-234 9-114 (116)
449 1qok_A MFE-23 recombinant anti 98.7 1.6E-07 5.6E-12 71.2 10.7 82 145-227 32-129 (282)
450 1mju_H Immunoglobulin MS6-12; 98.7 1.8E-07 6.2E-12 68.6 10.6 89 146-235 7-115 (227)
451 2jju_A Signal regulatory prote 98.7 6.8E-08 2.3E-12 64.3 7.5 79 146-225 10-96 (127)
452 1j05_H T84.66 antibody, anti-C 98.7 3E-07 1E-11 60.5 10.4 79 146-225 7-101 (121)
453 3m8o_H Immunoglobulin A1 heavy 98.7 1.7E-07 5.9E-12 68.3 10.1 88 147-235 8-118 (221)
454 1hnf_A CD2; T lymphocyte adhes 98.7 3.9E-08 1.3E-12 69.7 6.4 76 147-228 7-91 (182)
455 2znx_A SCFV; fluorotryptohpan, 98.7 2.3E-07 7.7E-12 68.8 10.8 76 146-226 8-94 (242)
456 1nkr_A P58-CL42 KIR; inhibitor 98.7 2.5E-08 8.7E-13 71.7 5.4 69 149-225 17-85 (201)
457 3bj9_1 Immunoglobulin IOTA cha 98.7 4.3E-07 1.5E-11 59.3 10.9 88 147-235 6-113 (116)
458 1dlf_L Anti-dansyl immunoglobu 98.7 6.2E-07 2.1E-11 58.2 11.6 87 146-235 8-112 (113)
459 2fbj_H IGA-kappa J539 FAB (hea 98.7 1.9E-07 6.5E-12 68.2 10.0 79 147-226 8-102 (220)
460 1c5d_H Monoclonal antibody aga 98.7 1.6E-07 5.5E-12 68.3 9.6 88 147-235 8-116 (215)
461 4ei6_B Vbeta16 XV19 type II na 98.7 2.1E-07 7E-12 69.0 10.3 74 146-224 9-97 (245)
462 2oyp_A Hepatitis A virus cellu 98.7 4.7E-08 1.6E-12 63.0 6.0 85 149-234 4-106 (109)
463 1op3_H FAB 2G12, heavy chain; 98.7 2.1E-07 7.2E-12 68.1 10.2 79 147-226 8-102 (225)
464 1xt5_A Variable region-contain 98.7 8.6E-08 2.9E-12 64.3 7.5 77 146-226 11-115 (135)
465 1yc7_A Anti-VSG immunoglobulin 98.7 3.9E-07 1.3E-11 60.3 10.5 78 147-225 8-100 (124)
466 3auv_A SC-DSFV derived from th 98.7 2.1E-07 7.1E-12 70.4 10.3 76 146-226 19-105 (276)
467 3tv3_L PGT128 light chain, IG 98.7 2.6E-07 8.9E-12 66.7 10.5 73 148-227 9-92 (211)
468 1sy6_A T-cell surface glycopro 98.7 7.3E-08 2.5E-12 69.6 7.5 65 152-234 16-80 (204)
469 1neu_A Myelin P0 protein; stru 98.6 2E-07 6.9E-12 61.4 9.0 89 146-235 6-118 (124)
470 4acp_A IG gamma-1 chain C regi 98.6 1.1E-08 3.8E-13 75.9 3.1 76 151-227 36-113 (240)
471 2p45_B Antibody CAB-RN05; seMe 98.6 6.3E-07 2.2E-11 59.1 11.4 78 147-225 10-103 (123)
472 2i24_N NEW antigen receptor PB 98.6 3.5E-07 1.2E-11 60.2 10.0 78 146-224 7-87 (121)
473 3b9v_A Heavy chain variable do 98.6 4.5E-07 1.5E-11 59.6 10.6 78 147-225 8-101 (120)
474 3fku_X Neutralizing antibody F 98.6 1.1E-07 3.7E-12 72.2 8.5 79 146-225 7-101 (280)
475 1tvd_A T cell receptor, ES204 98.6 4.2E-07 1.4E-11 59.3 10.3 78 146-225 7-98 (116)
476 2xqy_G A13-D6.3 monoclonal ant 98.6 3E-07 1E-11 69.1 10.8 80 145-225 12-107 (261)
477 1nbq_A JAM, junctional adhesio 98.6 4.5E-08 1.6E-12 70.4 6.1 73 146-227 11-92 (209)
478 1fo0_B Protein (BM3.3 T cell r 98.6 3.9E-07 1.3E-11 59.1 9.9 74 146-225 8-96 (112)
479 3kg5_A B-cell antigen receptor 98.6 4.2E-07 1.4E-11 60.9 10.3 84 146-235 25-118 (134)
480 1rjc_A 1D2L19, camelid heavy c 98.6 8.9E-07 3E-11 59.6 11.9 79 146-225 7-101 (137)
481 1kxt_B Immunoglobulin VHH frag 98.6 4.2E-07 1.4E-11 60.4 10.1 78 147-225 8-100 (127)
482 1svz_A Immunoglobulin;, single 98.6 4.5E-07 1.6E-11 67.2 11.3 86 146-234 8-111 (247)
483 2yz1_A Tyrosine-protein phosph 98.6 2.8E-07 9.4E-12 60.6 9.0 79 146-225 14-100 (120)
484 1nko_A Sialic acid binding IG- 98.6 1.2E-07 4.2E-12 63.4 7.3 90 145-235 12-126 (132)
485 2vol_A Murine IGG FC; FC, zinc 98.6 1.1E-08 3.7E-13 74.1 2.2 77 151-228 15-93 (207)
486 2xzc_L FAB A.17 light chain; i 98.6 1.3E-07 4.6E-12 68.6 8.0 79 146-227 7-96 (216)
487 1dee_B IGM RF 2A2; FAB-IBP com 98.6 3.3E-07 1.1E-11 67.0 10.1 79 147-226 8-102 (223)
488 2yc1_A Single chain antibody f 98.6 3.9E-07 1.3E-11 59.6 9.4 87 147-234 8-115 (117)
489 3rrq_A Protein PD-1, programme 98.6 5.1E-07 1.8E-11 60.1 10.1 88 146-235 8-114 (129)
490 3q5y_A TCR N15 beta; IG, T cel 98.6 3.3E-07 1.1E-11 67.6 10.0 73 146-223 9-95 (240)
491 2atp_B T-cell surface glycopro 98.6 4.9E-07 1.7E-11 58.9 9.7 88 146-235 5-115 (115)
492 2d9c_A Signal-regulatory prote 98.6 1.7E-07 5.8E-12 63.1 7.7 79 146-225 15-101 (136)
493 1oaq_L Light chain; antibody, 98.6 3.1E-07 1.1E-11 60.4 8.7 86 147-235 8-109 (120)
494 2qhl_A Novel immune-type recep 98.6 1.1E-07 3.6E-12 61.7 6.4 75 146-225 6-98 (111)
495 1dlf_H Anti-dansyl immunoglobu 98.6 8.8E-07 3E-11 58.5 10.8 87 148-235 9-120 (124)
496 2wzp_D Camelid VHH5; baseplate 98.6 6.7E-07 2.3E-11 59.0 10.2 78 147-225 8-101 (123)
497 3pl6_D MBP peptide / T-cell re 98.6 3.7E-07 1.3E-11 68.6 10.0 75 146-225 33-122 (268)
498 1q0x_L FAB 9B1, light chain; a 98.6 6.2E-07 2.1E-11 64.8 10.8 79 146-227 7-97 (212)
499 3sob_L Antibody light chain; b 98.6 2.6E-07 8.9E-12 67.9 8.9 77 146-227 31-118 (237)
500 2x1q_A Gelsolin nanobody; cont 98.6 7.6E-07 2.6E-11 59.1 10.3 79 146-225 7-101 (127)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=4e-23 Score=157.80 Aligned_cols=191 Identities=18% Similarity=0.278 Sum_probs=128.7
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce-----e----------------EEe-------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD-----I----------------HLL------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~-----~----------------~~~------------- 66 (236)
.+.++.... ...+.+|.|.+++.+|+|.|.|.+.+..+.. . .+.
T Consensus 48 ~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g 125 (284)
T 2rik_A 48 PGGNYKMTL--VENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGG 125 (284)
T ss_dssp SSSSEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEES
T ss_pred CCCcEEEEE--cCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEee
Confidence 344554443 2246899999999999999999987522110 0 000
Q ss_pred -cceeeEEecCCcEEEEcC-----CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCC
Q psy10361 67 -TTGRYTYTNDQRFRVINN-----PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEP 139 (236)
Q Consensus 67 -~~~~~~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~ 139 (236)
+...+.|.+++....... .......|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .+
T Consensus 126 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------------~~ 192 (284)
T 2rik_A 126 SPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-------------EP 192 (284)
T ss_dssp SSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE-------------CC
T ss_pred eCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEe-------------cC
Confidence 122355555442211000 01134689999999999999999999877543 66677776 22
Q ss_pred cccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEE
Q psy10361 140 ETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQ 219 (236)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~ 219 (236)
+.....+....+..|+++.|.|.+.+.| .+.+.|++++..+... .+....... ....|.|.++..+|.|.|+
T Consensus 193 p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~v~W~~~~~~~~~~---~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~ 264 (284)
T 2rik_A 193 PVFRKKPHPVETLKGADVHLECELQGTP--PFQVSWHKDKRELRSG---KKYKIMSEN---FLTSIHILNVDSADIGEYQ 264 (284)
T ss_dssp CBCCSCCCCEEECTTCCEEEEEECBSSS--CCEEEEEETTEEECBT---TTEEEEEET---TEEEEEECSCCGGGCEEEE
T ss_pred CcceeCCCcceecCCCeEEEEEEEEecC--CCEEEEEECCEECcCC---CCEEEEEcC---CEEEEEEcCCCcccCEEEE
Confidence 2223334567788999999999999884 4699999999888542 233333332 2357999999999999999
Q ss_pred EEeCCCCC---ceEEEEE
Q psy10361 220 CNPANSQA---KSVMVNV 234 (236)
Q Consensus 220 C~a~n~~g---~~~~~~v 234 (236)
|.|.|..| .++.|.|
T Consensus 265 C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 265 CKASNDVGSYTCVGSITL 282 (284)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEeCCCceeEEEEEEE
Confidence 99999998 3445555
No 2
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.91 E-value=5e-23 Score=164.05 Aligned_cols=176 Identities=19% Similarity=0.251 Sum_probs=122.4
Q ss_pred ceEEEEcCCCCCCCeeEEEEEEEEeccee-----------------------E--------E--------------ecce
Q psy10361 35 DWTLQLKYPQHKDTGIYECQVSFVRHRDI-----------------------H--------L--------------LTTG 69 (236)
Q Consensus 35 ~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~-----------------------~--------~--------------~~~~ 69 (236)
+.+|.|.+++.+|+|.|.|.+.+...... . + .+..
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p 235 (384)
T 3kld_A 156 TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVP 235 (384)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCC
T ss_pred CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCC
Confidence 45799999999999999999876321100 0 0 0112
Q ss_pred eeEEec-CCcEEEEc-CCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCC
Q psy10361 70 RYTYTN-DQRFRVIN-NPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGG 146 (236)
Q Consensus 70 ~~~~~~-~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
.+.|.+ ++...... ........|.|.+++.+|+|.|+|.|.|..+.. ....|.|. .++..+..+
T Consensus 236 ~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~-------------~~P~~~~~~ 302 (384)
T 3kld_A 236 TILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY-------------AQPNWVQII 302 (384)
T ss_dssp EEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------------EEEEEEECC
T ss_pred cEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEe-------------cCCccccCC
Confidence 345543 22111000 001234689999999999999999999988754 56677776 122233334
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
....+..|+.+.|.|.+.|.| .+.+.|++++..+.. ..++.+ .++ +|.|.++..+|+|.|+|.|.|.+
T Consensus 303 ~~~~v~~g~~v~l~C~~~g~P--~p~i~W~k~g~~l~~---~~~~~~--~~~-----~L~i~~v~~~D~G~Y~C~A~N~~ 370 (384)
T 3kld_A 303 NDIHVAMEESVFWECKANGRP--KPTYRWLKNGDPLLT---RDRIQI--EQG-----TLNITIVNLSDAGMYQCVAENKH 370 (384)
T ss_dssp CCEEECTTCCEEEECEEEEES--CCEEEEEETTEECCC---BTTEEE--ETT-----EEEESSCCGGGCEEEEEEEEETT
T ss_pred CceEecCCCCEEEEeECCccC--CCeEEEEECCEECCC---CccEEE--eCC-----EEEEeecChhhCEEEEEEEEeCC
Confidence 567888999999999999984 459999999988743 223332 233 79999999999999999999999
Q ss_pred C---ceEEEEEc
Q psy10361 227 A---KSVMVNVL 235 (236)
Q Consensus 227 g---~~~~~~v~ 235 (236)
| .++.|.|+
T Consensus 371 G~~~~~a~L~V~ 382 (384)
T 3kld_A 371 GVIFSSAELSVI 382 (384)
T ss_dssp EEEEEEEEEEEC
T ss_pred ceEEeceEEEEe
Confidence 9 45566664
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.91 E-value=2.5e-22 Score=167.81 Aligned_cols=186 Identities=19% Similarity=0.279 Sum_probs=127.7
Q ss_pred cCCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEeccee-----------------------------EE-----
Q psy10361 20 TNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRDI-----------------------------HL----- 65 (236)
Q Consensus 20 ~~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~-----------------------------~~----- 65 (236)
..+.++..... ....+|.|.+++.+|+|.|.|.+.+..+... .+
T Consensus 239 ~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~ 316 (570)
T 3b43_A 239 RPGGNYKMTLV--ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG 316 (570)
T ss_dssp CTTSSEEEEEE--TTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEE
T ss_pred cCCCcEEEEEE--CCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEe
Confidence 34455544331 2357999999999999999999876322110 00
Q ss_pred -ecceeeEEecCCcEEEEcC-----CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCC
Q psy10361 66 -LTTGRYTYTNDQRFRVINN-----PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPE 138 (236)
Q Consensus 66 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~ 138 (236)
.+...+.|.+++....... .......|.|.+++.+|+|.|+|.|.|..+.. ....|.|. .
T Consensus 317 g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~-------------~ 383 (570)
T 3b43_A 317 GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-------------E 383 (570)
T ss_dssp SSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEE-------------C
T ss_pred eCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEec-------------C
Confidence 0123466666543211000 00134679999999999999999999987654 66778877 2
Q ss_pred CcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 139 PETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
++.....+....+.+|+++.|.|.+.|.| .+.+.|++++..+.. ..+......+ ...+|.|.++..+|+|.|
T Consensus 384 ~P~~~~~~~~~~~~~G~~v~l~C~~~g~P--~p~v~W~k~g~~l~~---~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y 455 (570)
T 3b43_A 384 PPVFRKKPHPVETLKGADVHLECELQGTP--PFQVSWHKDKRELRS---GKKYKIMSEN---FLTSIHILNVDSADIGEY 455 (570)
T ss_dssp CCEECSCCCCEEECTTCCEEEEEEEESSS--SCCCEEEETTEECCS---SSSEEEEEET---TEEEEEECSCCGGGCEEE
T ss_pred CCeeecCCCceeecCCCEEEEEEEEecCC--CCEEEEEECCEECcC---CCCEEEEEcC---CEEEEEECCCChhhCEEE
Confidence 22233344567788999999999999984 459999999988743 2234433333 234799999999999999
Q ss_pred EEEeCCCCCc
Q psy10361 219 QCNPANSQAK 228 (236)
Q Consensus 219 ~C~a~n~~g~ 228 (236)
+|.|.|..|.
T Consensus 456 ~C~A~N~~G~ 465 (570)
T 3b43_A 456 QCKASNDVGS 465 (570)
T ss_dssp EEEEECSSCE
T ss_pred EEEEEECCCe
Confidence 9999999984
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.91 E-value=3.3e-23 Score=173.08 Aligned_cols=192 Identities=18% Similarity=0.288 Sum_probs=130.1
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEeccee----------------------------EE------e
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRDI----------------------------HL------L 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~----------------------------~~------~ 66 (236)
...++..... .....|.|.+++.+|+|.|.|.+.+..+... .+ .
T Consensus 334 ~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~ 411 (570)
T 3b43_A 334 ESSKFRMSFV--ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGT 411 (570)
T ss_dssp CSSSEEEEEE--TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESS
T ss_pred CCCcEEEEEE--CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecC
Confidence 3445544331 2457899999999999999999886432110 00 0
Q ss_pred cceeeEEecCCcEE-------EEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCC
Q psy10361 67 TTGRYTYTNDQRFR-------VINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPE 138 (236)
Q Consensus 67 ~~~~~~~~~~~~~~-------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~ 138 (236)
+...+.|.++++.. +... .....|.|.+++.+|+|.|+|.|.|..+.. ....|.|. .
T Consensus 412 P~p~v~W~k~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~-------------~ 476 (570)
T 3b43_A 412 PPFQVSWHKDKRELRSGKKYKIMSE--NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK-------------A 476 (570)
T ss_dssp SSCCCEEEETTEECCSSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC-------------C
T ss_pred CCCEEEEEECCEECcCCCCEEEEEc--CCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec-------------c
Confidence 22346676655322 1111 123579999999999999999999988754 55666666 2
Q ss_pred CcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 139 PETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
++.++..+....+..|+++.|.|.+.|. |++.+.|++++..+.... .++.+.... ...+|.|.++..+|+|.|
T Consensus 477 ~P~~~~~~~~~~~~~g~~~~l~c~~~g~--p~~~v~W~k~~~~~~~~~--~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 549 (570)
T 3b43_A 477 PPRFVKKLSDISTVVGEEVQLQATIEGA--EPISVAWFKDKGEIVRES--DNIWISYSE---NIATLQFSRAEPANAGKY 549 (570)
T ss_dssp CCEEEECCCCBCCBTTCCEEEEEEEESC--SSCCCEEEETTEECCCCT--TTEEECCCS---SEEEEEESSCCTTCCEEE
T ss_pred CCcccccCCCceecCCCeEEEEEEEecC--CCCEEEEEeCCeEeccCC--CeEEEEECC---CEEEEEECcCCHHHCEEE
Confidence 2233334445667789999999999998 556999999986553322 223322121 345899999999999999
Q ss_pred EEEeCCCCC---ceEEEEEcC
Q psy10361 219 QCNPANSQA---KSVMVNVLN 236 (236)
Q Consensus 219 ~C~a~n~~g---~~~~~~v~~ 236 (236)
+|.|.|.+| .++.|.|++
T Consensus 550 ~C~a~N~~G~~~~~a~L~V~e 570 (570)
T 3b43_A 550 TCQIKNEAGTQECFATLSVLE 570 (570)
T ss_dssp EEEEECSSCEEEEEEEECCBC
T ss_pred EEEEEECCcEEEEEEEEEEeC
Confidence 999999999 455666653
No 5
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.90 E-value=3.4e-22 Score=153.07 Aligned_cols=189 Identities=21% Similarity=0.312 Sum_probs=120.5
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEeccee----E--Ee----------------------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRDI----H--LL---------------------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~----~--~~---------------------------- 66 (236)
...|+.+.. .+...+|.|.+++.+|+|.|.|.+.+..+... . +.
T Consensus 47 ~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~ 124 (291)
T 2wim_A 47 STQRVVVQK--EGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS 124 (291)
T ss_dssp CBTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBC
T ss_pred CCCcEEEec--CCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEcc
Confidence 345665554 23467999999999999999999876432110 0 00
Q ss_pred -cceeeEEecCCcEEEEcCC----CCCcEEEEEcCCCCCCCEEEEEEeecCCCc-e--eEEEEEEEEEEeeCCcccccCC
Q psy10361 67 -TTGRYTYTNDQRFRVINNP----TSDDWTLQLKYPQHKDTGIYECQVSTTPHQ-A--HYIYLTVVVLVINDGKYLLVPE 138 (236)
Q Consensus 67 -~~~~~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~--~~~~l~v~~~~~~~~~~~~~~~ 138 (236)
+...+.|..++........ ...+..|.|.+++.+|+|.|+|.+.+.... . ..+.+.+. .+
T Consensus 125 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~-----------~~- 192 (291)
T 2wim_A 125 SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN-----------VP- 192 (291)
T ss_dssp SSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-----------BC-
T ss_pred CCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEec-----------cC-
Confidence 1123555544322111000 012446999999999999999999887532 2 34445554 11
Q ss_pred CcccccCCC--cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 139 PETDIIGGP--EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 139 ~~~~~~~~~--~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+ ....... ...+.+|+.+.|.|.+.+. |.+.+.|++++..+.. ..+....... ..|.|.++..+|+|
T Consensus 193 p-~~~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~v~W~~~g~~~~~---~~~~~~~~~~-----~~L~i~~~~~~d~G 261 (291)
T 2wim_A 193 P-AISMPQKSFNATAERGEEMTFSCRASGS--PEPAISWFRNGKLIEE---NEKYILKGSN-----TELTVRNIINSDGG 261 (291)
T ss_dssp C-CCBCSCSEEECCSSSCCEEEEECBCCCB--SCCEEEEEETTEECCC---TTTEEECSTT-----CEEEEESCCSTTCE
T ss_pred C-ccccCcccccceecCCCeEEEEEEeecC--CCCeEEEEECCEECcC---CccEEEcCCc-----cEEEEeeCCcccCE
Confidence 1 1111111 3356689999999999988 4458999999988743 1233322222 37999999999999
Q ss_pred EEEEEeCCCCC---ceEEEEE
Q psy10361 217 KYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 217 ~y~C~a~n~~g---~~~~~~v 234 (236)
.|+|.|.|..| .++.|.|
T Consensus 262 ~Y~C~a~N~~G~~~~~~~l~v 282 (291)
T 2wim_A 262 PYVCRATNKAGEDEKQAFLQV 282 (291)
T ss_dssp EEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEEEECCCceeeeEEEEE
Confidence 99999999998 3444444
No 6
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.89 E-value=1.4e-21 Score=151.35 Aligned_cols=210 Identities=20% Similarity=0.277 Sum_probs=129.7
Q ss_pred CeeEeeCCe---EEEE-ecceEecCCcceEEeec---CCCCceEEEEcCCCCCCCeeEEEEEEEEecc------------
Q psy10361 1 VSFVRHRDI---HLLT-TGRYTYTNDQRFRVINN---PTSDDWTLQLKYPQHKDTGIYECQVSFVRHR------------ 61 (236)
Q Consensus 1 v~w~~~~~~---~~~~-~~~~~~~~~~r~~~~~~---~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~------------ 61 (236)
|.|++.... .++. .....+....|+..... ....+++|+|.+++.+|+|.|.|++......
T Consensus 37 V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~ 116 (313)
T 4fqp_A 37 LTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA 116 (313)
T ss_dssp EEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBB
T ss_pred EEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeecc
Confidence 358775422 2222 12234556677766542 2335689999999999999999987531100
Q ss_pred ----------------eeEE--------ecceeeEEecCCcEEE----EcCCCCC----cEEEEEcCCCCCCCEEEEEEe
Q psy10361 62 ----------------DIHL--------LTTGRYTYTNDQRFRV----INNPTSD----DWTLQLKYPQHKDTGIYECQV 109 (236)
Q Consensus 62 ----------------~~~~--------~~~~~~~~~~~~~~~~----~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~ 109 (236)
.... .+...+.|.+++.... ......+ ...|.|...+.+|.|.|+|.+
T Consensus 117 ~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a 196 (313)
T 4fqp_A 117 KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKV 196 (313)
T ss_dssp CCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEE
T ss_pred CCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEE
Confidence 0000 0223466665543221 0001111 235889999999999999999
Q ss_pred ecCCCc---eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeec
Q psy10361 110 STTPHQ---AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDS 186 (236)
Q Consensus 110 ~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~ 186 (236)
.|.... ...+.|.|. + + +...+.......+..|+.+.|.|.+.|.|.| ..+.|++++..+..
T Consensus 197 ~n~~~~~~~~~~~~l~V~----------~-~-P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~~v~W~~~~~~l~~-- 261 (313)
T 4fqp_A 197 EHESFEKPQLLTVNLTVY----------Y-P-PEVSISGYDNNWYLGQNEATLTCDARSNPEP-TGYNWSTTMGPLPP-- 261 (313)
T ss_dssp ECTTSSSCEEEEEECCBC----------E-E-EEEEEECCCSCEETTCCCEEEEEEEEEESCC-CEEEEEETTBSCCT--
T ss_pred EccCcCccceeeeecccc----------c-C-CccccccccceeecCCCeEEEEEEecCCCCC-cEEEEEECCEECCC--
Confidence 986432 234444444 1 1 1112233344566778999999999998533 36999999977632
Q ss_pred CCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 187 QRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
.. ...+. +|.|.++..+|+|.|+|.|.|..| .++.|.|.
T Consensus 262 ---~~--~~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 262 ---FA--VAQGA-----QLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp ---TE--EEETT-----EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ---ce--EEeCC-----EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 11 11222 799999999999999999999998 34455553
No 7
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.89 E-value=2.1e-21 Score=150.43 Aligned_cols=201 Identities=22% Similarity=0.278 Sum_probs=123.3
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce----------------------------eEE-------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD----------------------------IHL------- 65 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~----------------------------~~~------- 65 (236)
.+.++.... .+.+|.|.+++.+|+|.|.|.+.+..+.. ..+
T Consensus 50 ~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~ 125 (317)
T 2y25_A 50 VDEKHDFKD----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGI 125 (317)
T ss_dssp CSCC---------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEE
T ss_pred CCCcEEEEC----CeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeecccc
Confidence 344554432 46899999999999999999987532111 000
Q ss_pred ---------ecceeeEEecCCcE-------EEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEe
Q psy10361 66 ---------LTTGRYTYTNDQRF-------RVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVI 128 (236)
Q Consensus 66 ---------~~~~~~~~~~~~~~-------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~ 128 (236)
.+...+.|.+++.. .... ......|.|.+++.+|+|.|+|.+.|..+.. ..+.+.+.....
T Consensus 126 ~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 203 (317)
T 2y25_A 126 QLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGV--TGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDE 203 (317)
T ss_dssp EEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEE--CSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHH
T ss_pred EEEEEeccCCCCcEEEEEECCEECCCCCCeEEec--cCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccc
Confidence 12334566654422 2211 1234569999999999999999999976544 333443320000
Q ss_pred e------CCcccccCC-Cccccc-CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcc
Q psy10361 129 N------DGKYLLVPE-PETDII-GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGET 200 (236)
Q Consensus 129 ~------~~~~~~~~~-~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (236)
. -......+. .+..+. .+....+..|+.+.|.|.+.+.| .+.+.|++++..+.. ..+..+...++
T Consensus 204 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g~~~~~---~~~~~~~~~~~-- 276 (317)
T 2y25_A 204 AYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDP--PPEVSWLKNEKALAS---DDHCNLKFEAG-- 276 (317)
T ss_dssp HHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSS--CCEEEEEESSSEECC---CSSEEECCBTT--
T ss_pred cchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCC--CCEEEEEECCEeCCC---CCcEEEEEcCC--
Confidence 0 000000001 111222 23457888999999999999984 459999999988843 22333322212
Q ss_pred eEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 201 TVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 201 ~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
..+.|.|.++..+|+|.|+|.|.|..| .++.|.|
T Consensus 277 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 313 (317)
T 2y25_A 277 RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 313 (317)
T ss_dssp TEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 346899999999999999999999998 3344444
No 8
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.89 E-value=9.3e-22 Score=150.65 Aligned_cols=195 Identities=21% Similarity=0.337 Sum_probs=122.5
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce----e--EEe----------------------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD----I--HLL---------------------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~----~--~~~---------------------------- 66 (236)
...|+.+... ...+.+|.|.+++.+|+|.|.|.+.+..+.. . .+.
T Consensus 48 ~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 126 (291)
T 1qz1_A 48 NQQRISVVWN-DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVS 126 (291)
T ss_dssp SCSSEEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEEC
T ss_pred CCceEEEEEc-CCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEecc
Confidence 3456655432 2356799999999999999999987643110 0 000
Q ss_pred -cceeeEEecCCcEEEEcCC----CCCcEEEEEcCCCCCCCEEEEEEeecCC-Cc--eeEEEEEEEEEEeeCCcccccCC
Q psy10361 67 -TTGRYTYTNDQRFRVINNP----TSDDWTLQLKYPQHKDTGIYECQVSTTP-HQ--AHYIYLTVVVLVINDGKYLLVPE 138 (236)
Q Consensus 67 -~~~~~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~~--~~~~~l~v~~~~~~~~~~~~~~~ 138 (236)
+...+.|.+++........ ......|.|.+++.+|+|.|+|.+.+.. +. ...+.+.|.. +
T Consensus 127 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~-----------~- 194 (291)
T 1qz1_A 127 SLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV-----------P- 194 (291)
T ss_dssp SSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE-----------E-
T ss_pred CCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec-----------C-
Confidence 1123455544321100000 0124579999999999999999998754 22 2445555541 1
Q ss_pred Cccccc-CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecC-CCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 139 PETDII-GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQ-RGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 139 ~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+..... .+....+..|+.+.|.|.+.+.| .+.+.|++++..+..... ..+....... +.|.|.++..+|+|
T Consensus 195 p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~g~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~d~G 267 (291)
T 1qz1_A 195 PTVQARQSIVNATANLGQSVTLVCDADGFP--EPTMSWTKDGEPIENEEEDDEKHIFSDDS-----SELTIRNVDKNDEA 267 (291)
T ss_dssp EEEEESCSEEEEETTSCCCEEEEEEEEEES--CCEEEEEETTEECCCC--CCSSEEECTTS-----CEEEECSCCGGGCE
T ss_pred CcccccccccccccccCceEEEEEEEEEeC--CCcEEEEECCEECcCCCCCCcceEEcCCC-----cEEEEEecChhcCE
Confidence 111111 11244667899999999999984 459999999988754221 1122222222 37999999999999
Q ss_pred EEEEEeCCCCC---ceEEEEEc
Q psy10361 217 KYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 217 ~y~C~a~n~~g---~~~~~~v~ 235 (236)
.|+|.|.|..| .++.|.|.
T Consensus 268 ~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 268 EYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEeCCCceEEEEEEEEE
Confidence 99999999998 44455554
No 9
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.88 E-value=2e-21 Score=154.49 Aligned_cols=175 Identities=18% Similarity=0.223 Sum_probs=120.4
Q ss_pred ceEEEEcCCCCCCCeeEEEEEEEEecc--------eeEEe--------------------------------------cc
Q psy10361 35 DWTLQLKYPQHKDTGIYECQVSFVRHR--------DIHLL--------------------------------------TT 68 (236)
Q Consensus 35 ~~~L~i~~~~~~D~G~Y~C~v~~~~~~--------~~~~~--------------------------------------~~ 68 (236)
+.+|.|.+++.+|+|.|.|.+.+..+. ...+. +.
T Consensus 157 ~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~ 236 (382)
T 1cs6_A 157 TGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPV 236 (382)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESC
T ss_pred ceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCC
Confidence 458999999999999999998764410 00000 01
Q ss_pred eeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCC
Q psy10361 69 GRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGP 147 (236)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (236)
..+.|.+++... ..........|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|. .++.....+.
T Consensus 237 ~~i~W~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------------~~p~~~~~~~ 302 (382)
T 1cs6_A 237 PQIKWRKLDGSQ-TSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH-------------AQPDWLDVIT 302 (382)
T ss_dssp CEEEEEECCSCC-SCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------------EEEEEEECCC
T ss_pred CEEEEEECCccc-ccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEe-------------cCCCcccCCC
Confidence 123333322111 00111245689999999999999999999987654 56667776 1222233345
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
...+..|+++.|.|.+.+.| .+.+.|++++..+... .+... .++ .|.|.++..+|+|.|+|.|.|..|
T Consensus 303 ~~~~~~g~~~~l~C~~~g~p--~p~v~W~~~g~~~~~~---~~~~~--~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G 370 (382)
T 1cs6_A 303 DTEADIGSDLRWSCVASGKP--RPAVRWLRDGQPLASQ---NRIEV--SGG-----ELRFSKLVLEDSGMYQCVAENKHG 370 (382)
T ss_dssp CEEEETTCCEEEECEEEEES--CCEEEEEETTEECCCC---SSEEE--ETT-----EEEESSCCGGGCEEEEEEEEETTE
T ss_pred ccEEcCCCeEEEEEEeeeec--CCEEEEEECCEECCCC---ceEEE--ECC-----EEEECcCCcccCEEEEEEEEeCCC
Confidence 67788999999999999984 4589999999887532 23332 232 799999999999999999999998
Q ss_pred ---ceEEEEEc
Q psy10361 228 ---KSVMVNVL 235 (236)
Q Consensus 228 ---~~~~~~v~ 235 (236)
.++.|.|.
T Consensus 371 ~~~~~~~l~V~ 381 (382)
T 1cs6_A 371 TVYASAELTVQ 381 (382)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEEEEe
Confidence 44556553
No 10
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.88 E-value=1.7e-20 Score=157.02 Aligned_cols=193 Identities=14% Similarity=0.249 Sum_probs=124.1
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce---------eEEe-------------------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD---------IHLL------------------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~---------~~~~------------------------- 66 (236)
.+.|+.+......+.++|.|.+++.+|+|.|.|.+.+..... +.+.
T Consensus 275 ~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~ 354 (585)
T 2ocw_A 275 FEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCP 354 (585)
T ss_pred cCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEe
Confidence 356666665333445689999999999999999988632111 0000
Q ss_pred ----cceee----EEec--CCc--EE----------------EEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-cee
Q psy10361 67 ----TTGRY----TYTN--DQR--FR----------------VINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-QAH 117 (236)
Q Consensus 67 ----~~~~~----~~~~--~~~--~~----------------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~ 117 (236)
+...+ .|.+ ++. .. +......+...|.|.+++.+|+|.|+|.| |..+ ...
T Consensus 355 ~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~ 433 (585)
T 2ocw_A 355 YNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRT 433 (585)
T ss_pred cCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccce
Confidence 11112 4665 443 11 11111122345999999999999999999 6544 346
Q ss_pred EEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC--CCCCeEEEeecCeEEeeecCCCc-eEEE
Q psy10361 118 YIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP--EPPAYIFWNHNEAIISYDSQRGG-VNVI 194 (236)
Q Consensus 118 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~~v~W~~~~~~~~~~~~~~~-~~~~ 194 (236)
.+.|.|. ...+.+..+....+..|+++.|.|.+.+.+ .|.+.+.|++++..+........ ....
T Consensus 434 ~~~l~V~-------------~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~ 500 (585)
T 2ocw_A 434 TVEIKII-------------EGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFV 500 (585)
T ss_pred eEEEEEe-------------cCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceE
Confidence 6777776 222233335567889999999999997332 25568999999987754321111 1011
Q ss_pred eecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 195 TEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 195 ~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..........|.|.++..+|+|.|+|.|.|..|
T Consensus 501 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 533 (585)
T 2ocw_A 501 NCDENSRLVSLTLNLVTRADEGWYWCGVKQGHF 533 (585)
T ss_pred EecCcccEEEEEECCCCcccCeEEEEEeEeCCC
Confidence 111112345899999999999999999999997
No 11
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.88 E-value=4.8e-21 Score=152.49 Aligned_cols=108 Identities=27% Similarity=0.380 Sum_probs=86.7
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|. .++.....+....+..|+++.|.|.+.+.|
T Consensus 269 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------------~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p 335 (388)
T 2v5m_A 269 SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT-------------APLSAKIDPPTQTVDFGRPAVFTCQYTGNP 335 (388)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE-------------EEEEEEEESSEEEECTTSCEEEEEEEEEEC
T ss_pred cCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEe-------------CCCccccCCCcEEecCCCCEEEEEEecccc
Confidence 3479999999999999999999987654 56677776 122222334567788999999999999985
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.|++++..+... + ..|.|.++..+|+|.|+|.|.|..|
T Consensus 336 --~p~i~W~~~g~~i~~~-----------~-----~~L~i~~v~~~d~G~Y~C~a~N~~G 377 (388)
T 2v5m_A 336 --IKTVSWMKDGKAIGHS-----------E-----SVLRIESVKKEDKGMYQCFVRNDRE 377 (388)
T ss_dssp --CCEEEEEETTEECSCC-----------S-----SEEEESSCCGGGCEEEEEEEECSSC
T ss_pred --CCeEEEEECCEECccC-----------C-----CEEEEecCChhhCEEEEEEEEcCCC
Confidence 4599999999877421 1 2799999999999999999999998
No 12
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.8e-21 Score=150.15 Aligned_cols=182 Identities=21% Similarity=0.271 Sum_probs=115.0
Q ss_pred CcceEEeecCCCCceEEEEcCCCC-CCCeeEEEEEEEEecce-----eEEe-----------------------------
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQH-KDTGIYECQVSFVRHRD-----IHLL----------------------------- 66 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~v~~~~~~~-----~~~~----------------------------- 66 (236)
..|+.......+...+|.|.+++. +|+|.|.|.+.+..+.. +.+.
T Consensus 49 ~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l 128 (304)
T 2yd9_A 49 SQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATM 128 (304)
T ss_dssp CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEE
T ss_pred CCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEE
Confidence 345555543344458999999998 99999999987532110 0000
Q ss_pred -------cceeeEEecCCcEEEEcCC-----CCCcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCc
Q psy10361 67 -------TTGRYTYTNDQRFRVINNP-----TSDDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGK 132 (236)
Q Consensus 67 -------~~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~ 132 (236)
+...+.|.+++........ ......|.|.+++.+|+|.|+|.+.|..+.. ....+.|.+
T Consensus 129 ~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~------- 201 (304)
T 2yd9_A 129 LCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRV------- 201 (304)
T ss_dssp CCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-------
T ss_pred EEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEe-------
Confidence 1123556555432110000 0123479999999999999999999987543 224555541
Q ss_pred ccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 133 YLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
...++.....+....+..|+++.|.|.+.+.| .+.+.|++++..+..... .. .....|.+.++
T Consensus 202 ---~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~~~~l~~~~~---~~-------~~~~~L~i~~~-- 264 (304)
T 2yd9_A 202 ---QNVAPRFSILPMSHEIMPGGNVNITCVAVGSP--MPYVKWMQGAEDLTPEDD---MP-------VGRNVLELTDV-- 264 (304)
T ss_dssp ---CCEEEEEEECCCCBCCCTTCCEEEEEEEEEES--CCEEEEEETTEECSCSSS---CC-------BSEEEEEECSC--
T ss_pred ---eccCCcEEecCCceEEcCCCeEEEEEEEeeeC--CCEEEEEECCEECCCccc---cc-------CCcEEEEEccc--
Confidence 01111122233445678899999999999984 459999999988753211 10 12235666665
Q ss_pred CCCeEEEEEeCCCCC
Q psy10361 213 SDNGKYQCNPANSQA 227 (236)
Q Consensus 213 ~d~G~y~C~a~n~~g 227 (236)
+|+|.|+|.|.|..|
T Consensus 265 ~d~G~Y~C~a~N~~G 279 (304)
T 2yd9_A 265 KDSANYTCVAMSSLG 279 (304)
T ss_dssp CSCEEEEEEEEETTE
T ss_pred ccCEEEEEEEEeCCC
Confidence 699999999999998
No 13
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.88 E-value=2.1e-21 Score=155.29 Aligned_cols=126 Identities=19% Similarity=0.308 Sum_probs=95.4
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|. .++.....+....+.+|+++.|.|.+.+.|
T Consensus 274 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------------~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p 340 (404)
T 3p3y_A 274 NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK-------------AAPYWLDEPKNLILAPGEDGRLVCRANGNP 340 (404)
T ss_dssp GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE-------------EEEEEEECCCCEEECTTCCEEEECEEEEES
T ss_pred CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe-------------CCCeeeccCCcceeecCCcEEEEEEccccC
Confidence 4579999999999999999999987653 66777776 222233345567888999999999999984
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEcC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVLN 236 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~~ 236 (236)
.+.+.|++++..+.......... ..++ +|.|.++..+|+|.|+|.|.|..| .++.|.|+|
T Consensus 341 --~p~v~W~~~g~~~~~~~~~~~~~--~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 341 --KPTVQWMVNGEPLQSAPPNPNRE--VAGD-----TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp --CCEEEEEETTEEGGGSCCCTTEE--EETT-----EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred --CCceEEEECCEecCCCCCCceEE--ecCC-----EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 45999999998875432221222 2232 799999999999999999999998 455667664
No 14
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.87 E-value=2.8e-21 Score=154.54 Aligned_cols=176 Identities=20% Similarity=0.315 Sum_probs=119.9
Q ss_pred ceEEEEcCCCCCCCeeEEEEEEEEecc----e--eEE-----------------------------------ecceeeEE
Q psy10361 35 DWTLQLKYPQHKDTGIYECQVSFVRHR----D--IHL-----------------------------------LTTGRYTY 73 (236)
Q Consensus 35 ~~~L~i~~~~~~D~G~Y~C~v~~~~~~----~--~~~-----------------------------------~~~~~~~~ 73 (236)
+.+|.|.+++.+|+|.|.|.+.+..+. . ..+ .+...+.|
T Consensus 176 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W 255 (403)
T 3laf_A 176 SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTW 255 (403)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEE
T ss_pred CceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEE
Confidence 348999999999999999998763211 0 000 01123555
Q ss_pred ecCCcEEEEcCC---CCCcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcE
Q psy10361 74 TNDQRFRVINNP---TSDDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEV 149 (236)
Q Consensus 74 ~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (236)
.+++........ ...+..|.|.+++.+|+|.|+|.+.|..+. +..+.|.|. .++.....+...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------------~~p~~~~~~~~~ 322 (403)
T 3laf_A 256 LRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL-------------VPPWFLNHPSNL 322 (403)
T ss_dssp EETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------------EEEEEEECCCCE
T ss_pred EECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE-------------CCCcEeecCcce
Confidence 544432211000 012347999999999999999999988754 366777776 122233334566
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC--
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA-- 227 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g-- 227 (236)
.+..|+++.|.|.+.+.| .+.+.|++++..+.. ....... ... .|.|.++..+|.|.|+|.|.|..|
T Consensus 323 ~~~~g~~v~l~C~~~g~p--~p~v~W~~~g~~~~~---~~~~~~~-~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~ 391 (403)
T 3laf_A 323 YAYESMDIEFECAVSGKP--VPTVNWMKNGDVVIP---SDYFQIV-GGS-----NLRILGVVKSDEGFYQCVAENEAGNA 391 (403)
T ss_dssp ECCTTCCEEECCEEEEES--CCEEEEEETTEECCC---SSSEEEE-TTT-----EEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred EEecCCeEEEEEEEeecc--CCEEEEEECCEECCC---CCcEEEe-cCc-----cEEEeccccccCEEEEEEEEcCCceE
Confidence 778999999999999984 459999999988743 1222222 222 799999999999999999999998
Q ss_pred -ceEEEEE
Q psy10361 228 -KSVMVNV 234 (236)
Q Consensus 228 -~~~~~~v 234 (236)
.++.|.|
T Consensus 392 ~~~~~l~V 399 (403)
T 3laf_A 392 QSSAQLIV 399 (403)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 3444544
No 15
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.87 E-value=9.2e-22 Score=152.04 Aligned_cols=181 Identities=16% Similarity=0.213 Sum_probs=114.5
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecc-------------------------------eeEE-----
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHR-------------------------------DIHL----- 65 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~-------------------------------~~~~----- 65 (236)
..|+.+... ...+.+|.|.+++.+|+|.|.|++.+.... ...+
T Consensus 61 ~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~ 139 (308)
T 4fom_A 61 QGRVLFKNY-SLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAA 139 (308)
T ss_dssp TTTEEESCC-SSSBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEE
T ss_pred cceEEeecc-CCCceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEec
Confidence 345555332 345789999999999999999998652100 0000
Q ss_pred --ecceeeEEecCCcEEE---EcCC---CCCcEEEEEcCCCCCCCEEEEEEeecCCCc---eeEEEEEEEEEEeeCCccc
Q psy10361 66 --LTTGRYTYTNDQRFRV---INNP---TSDDWTLQLKYPQHKDTGIYECQVSTTPHQ---AHYIYLTVVVLVINDGKYL 134 (236)
Q Consensus 66 --~~~~~~~~~~~~~~~~---~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~l~v~~~~~~~~~~~ 134 (236)
.+...+.|.+++.... .... ......|.|..++.+|.|.|+|.+.+..+. ...+.|.|..
T Consensus 140 ~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~--------- 210 (308)
T 4fom_A 140 TGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQY--------- 210 (308)
T ss_dssp EEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCE---------
T ss_pred CCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEec---------
Confidence 0122456655543211 0000 011246999999999999999999986532 2344444541
Q ss_pred ccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 135 LVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
++...+.......+..|+.+.|.|.+.|.|.| ..+.|++++..+.... ...++ ..|.|.++..+|
T Consensus 211 ---~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~~v~W~k~~~~~~~~~-------~~~~~----~~l~i~~v~~~d 275 (308)
T 4fom_A 211 ---APEVSVTGYDGNWFVGRKGVNLKCNADANPPP-FKSVWSRLDGQWPDGL-------LASDN----TLHFVHPLTFNY 275 (308)
T ss_dssp ---EEEECCBCCCSCEETTCCSCEEECCEEEESCE-EEEECCBSSSCCCSSC-------BCSTT----EEECCSCCCSCC
T ss_pred ---CCeeEEcccceeeeeccccEEEEEEEecCCCC-cEEEEEECCeECCCcE-------EEcCC----eEEEECCCChhh
Confidence 11112222334566788999999999998432 3699999987663211 01111 356788999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|+|.|.|.+|
T Consensus 276 ~G~Y~C~A~N~~G 288 (308)
T 4fom_A 276 SGVYICKVTNSLG 288 (308)
T ss_dssp CSEEEEEEEETTE
T ss_pred CEEEEEEEEeCCC
Confidence 9999999999998
No 16
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.87 E-value=2.1e-20 Score=145.88 Aligned_cols=182 Identities=20% Similarity=0.260 Sum_probs=118.8
Q ss_pred ceEEEEcCCCCCCCe-eEEEEEEEEecce---e--------------------------EE------ec-ceeeEEecCC
Q psy10361 35 DWTLQLKYPQHKDTG-IYECQVSFVRHRD---I--------------------------HL------LT-TGRYTYTNDQ 77 (236)
Q Consensus 35 ~~~L~i~~~~~~D~G-~Y~C~v~~~~~~~---~--------------------------~~------~~-~~~~~~~~~~ 77 (236)
+.+|.|.+++.+|+| .|.|.+.+..+.. . .+ .+ ...+.|.+++
T Consensus 88 ~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~ 167 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNN 167 (329)
T ss_dssp TTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETT
T ss_pred cceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECC
Confidence 459999999999999 9999988633110 0 00 02 2345666555
Q ss_pred cEEEEcCC--CCCcEEEEEcCCCCCCCEEEEEEeecC--CC-ce----eEEEEEEEEEEeeCCcccccCCC-cccccCCC
Q psy10361 78 RFRVINNP--TSDDWTLQLKYPQHKDTGIYECQVSTT--PH-QA----HYIYLTVVVLVINDGKYLLVPEP-ETDIIGGP 147 (236)
Q Consensus 78 ~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~--~~-~~----~~~~l~v~~~~~~~~~~~~~~~~-~~~~~~~~ 147 (236)
........ ...+..|.|.+++.+|+|.|+|.+.|. .+ .. ..+.|.|. ..|.. .+.+ .+.
T Consensus 168 ~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~----------~~~~~~~~~~-~~~ 236 (329)
T 3oq3_B 168 QELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVI----------PSQDHRFKLI-LDP 236 (329)
T ss_dssp EECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEE----------CCCCCCEEEE-CCS
T ss_pred ccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEE----------CCCCCCCcee-cCC
Confidence 33210000 011358999999999999999999986 32 22 23556666 11111 1333 456
Q ss_pred cEEEecCCeEEEEeEEeeCCC-CCC-eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe-EEEEEeCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPE-PPA-YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG-KYQCNPAN 224 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~-p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~y~C~a~n 224 (236)
...+..|+++.|.|.+.+.|. +++ .+.|++++..+...... ........+......|.|.++..+|.| .|+|.|.|
T Consensus 237 ~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N 315 (329)
T 3oq3_B 237 KINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFG-VYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHN 315 (329)
T ss_dssp EEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSS-EEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEEC
T ss_pred eeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCc-eeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEe
Confidence 678899999999999999851 144 88999998875322211 111111122234568999999999999 99999999
Q ss_pred CCCc
Q psy10361 225 SQAK 228 (236)
Q Consensus 225 ~~g~ 228 (236)
..|.
T Consensus 316 ~~G~ 319 (329)
T 3oq3_B 316 YYFD 319 (329)
T ss_dssp SSCE
T ss_pred cCCc
Confidence 9983
No 17
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.87 E-value=2.6e-20 Score=143.85 Aligned_cols=195 Identities=17% Similarity=0.247 Sum_probs=121.3
Q ss_pred EecCCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecc--------------------------------eeEE
Q psy10361 18 TYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHR--------------------------------DIHL 65 (236)
Q Consensus 18 ~~~~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~--------------------------------~~~~ 65 (236)
....+.|+.+.. .+...+|.|.+++.+|+|.|.|.+.+..+. ...+
T Consensus 42 ~i~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v 119 (312)
T 2y23_A 42 STEDSPRLEVES--KGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEI 119 (312)
T ss_dssp ECTTCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEE
T ss_pred ECCCCCCEEEEE--eCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeecccccCCCCccccccCCceEE
Confidence 344567887776 335679999999999999999988752110 0000
Q ss_pred e---------------cceeeEEecCCcEE-------EEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEE
Q psy10361 66 L---------------TTGRYTYTNDQRFR-------VINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTV 123 (236)
Q Consensus 66 ~---------------~~~~~~~~~~~~~~-------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v 123 (236)
. +...+.|.+++... +..........|.|.+++.+|+|.|+|.+.+..... ...+.+
T Consensus 120 ~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~ 198 (312)
T 2y23_A 120 LEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN-HSTVVL 198 (312)
T ss_dssp CSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEE-EEEEEE
T ss_pred eeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceE-EEEEEE
Confidence 0 12235565544322 221111234569999999999999999998654322 223333
Q ss_pred EEEEeeCCcccc------------cCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCce
Q psy10361 124 VVLVINDGKYLL------------VPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGV 191 (236)
Q Consensus 124 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~ 191 (236)
. ...... .....+.+..+....+.+|+++.|.|.+.+.|. +..+.|++++..+.... +.
T Consensus 199 ~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~-~~~v~W~~~g~~~~~~~---~~ 269 (312)
T 2y23_A 199 V-----GDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKK-ETHIVWYKDEREISVDE---KH 269 (312)
T ss_dssp C-----THHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCS-SCEEEEEETTEEEEEEC---CC
T ss_pred c-----chhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCC-CCEEEEeeCCEECCCCC---cE
Confidence 1 000000 000001111112357889999999999999842 23899999999886432 22
Q ss_pred EEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCce
Q psy10361 192 NVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKS 229 (236)
Q Consensus 192 ~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~ 229 (236)
... . ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 270 ~~~--~---~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~ 302 (312)
T 2y23_A 270 DFK--D---GICTLLITEFSKKDAGIYEVILKDDRGKD 302 (312)
T ss_dssp ---------CEEEEEECSCSGGGCEEEEEEEESTTCCE
T ss_pred EEE--C---CEEEEEECcCCHHHCEEEEEEEEcCCCce
Confidence 221 1 23589999999999999999999999943
No 18
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.86 E-value=1.3e-20 Score=145.98 Aligned_cols=187 Identities=19% Similarity=0.221 Sum_probs=115.2
Q ss_pred EEEEcCCCCCCCeeEEEEEEEEecc--------------------------------eeEEe--c------c----eeeE
Q psy10361 37 TLQLKYPQHKDTGIYECQVSFVRHR--------------------------------DIHLL--T------T----GRYT 72 (236)
Q Consensus 37 ~L~i~~~~~~D~G~Y~C~v~~~~~~--------------------------------~~~~~--~------~----~~~~ 72 (236)
+|.|.+++.+|+|.|.|.+.+..+. ...+. . . ..+.
T Consensus 63 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~ 142 (315)
T 1itb_B 63 KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQ 142 (315)
T ss_dssp BEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCE
T ss_pred eEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEE
Confidence 8999999999999999987642210 00110 0 1 2355
Q ss_pred EecCCcEEEEcCC--CCCcEEEEEcCCCCCCCEEEEEEee-cCCCce----eEEEEEEEEEEeeCCcccccCCCcccccC
Q psy10361 73 YTNDQRFRVINNP--TSDDWTLQLKYPQHKDTGIYECQVS-TTPHQA----HYIYLTVVVLVINDGKYLLVPEPETDIIG 145 (236)
Q Consensus 73 ~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~-~~~~~~----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~ 145 (236)
|.+++........ ......|.|.+++.+|+|.|+|.+. +..+.. ..+.+.+. . ......|.+..
T Consensus 143 W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~----~-----~~~~~~P~~~~ 213 (315)
T 1itb_B 143 WYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL----E-----ENKPTRPVIVS 213 (315)
T ss_dssp EEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEE----C-----CCCCCCCEECS
T ss_pred EEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEe----c-----CCCCCCCEEec
Confidence 6555433211000 0123489999999999999999999 665543 22223222 0 00012223333
Q ss_pred CC--cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCC-ceEEEeec-----CcceEEEEEEcccCCCC-Ce
Q psy10361 146 GP--EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRG-GVNVITEK-----GETTVSYLLIQKARPSD-NG 216 (236)
Q Consensus 146 ~~--~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~L~i~~v~~~d-~G 216 (236)
+. ...+..|+++.|.|.+.+.| .+.+.|++++..+....... ........ .....+.|.|.++..+| +|
T Consensus 214 ~~~~~~~~~~g~~v~l~C~~~g~P--~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G 291 (315)
T 1itb_B 214 PANETMEVDLGSQIQLICNVTGQL--SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKH 291 (315)
T ss_dssp CCSEEEECCSSSCEEEEEEEEECT--TSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTS
T ss_pred CCCCcEEEeCCCcEEEEEEEecCC--CCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCC
Confidence 33 35678999999999999984 45999999998875421110 00000000 01234589999999999 99
Q ss_pred EEEEEeCCCCCc---eEEEEE
Q psy10361 217 KYQCNPANSQAK---SVMVNV 234 (236)
Q Consensus 217 ~y~C~a~n~~g~---~~~~~v 234 (236)
.|+|.|.|..|. ++.|.|
T Consensus 292 ~Y~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 292 PFTCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp CEEEEEECTTCCEEEEEEEEC
T ss_pred ceEEEEecCCCceeEEEEEEe
Confidence 999999999993 444544
No 19
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.86 E-value=5.1e-20 Score=140.82 Aligned_cols=179 Identities=16% Similarity=0.203 Sum_probs=113.1
Q ss_pred CCceEEEEcCCCCCCCeeEEEEEEEEecce---------------------eEE-------e-------cce-eeEEe-c
Q psy10361 33 SDDWTLQLKYPQHKDTGIYECQVSFVRHRD---------------------IHL-------L-------TTG-RYTYT-N 75 (236)
Q Consensus 33 ~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~---------------------~~~-------~-------~~~-~~~~~-~ 75 (236)
..+.+|.|.+++.+|+|.|.|.+.+..+.. ..+ + +.. .+.|. .
T Consensus 48 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~ 127 (289)
T 3ejj_X 48 SPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMRE 127 (289)
T ss_dssp SSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEG
T ss_pred CCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEec
Confidence 356799999999999999999865321100 000 0 011 15554 3
Q ss_pred CCcEEEEcCC--CCCcEEEEEcCCCCCCCEEEEEEeecCC-C-ceeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEE
Q psy10361 76 DQRFRVINNP--TSDDWTLQLKYPQHKDTGIYECQVSTTP-H-QAHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 150 (236)
++........ ......|.|.+++.+|+|.|+|.+.+.. + .+..+.|.|. ..+...+.+ ..+....
T Consensus 128 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~----------~~~~~~p~i~~~~~~~~ 197 (289)
T 3ejj_X 128 GGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVN----------RVHPEPPQIKLEPSKLV 197 (289)
T ss_dssp GGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE----------SSCCCCCEEEEESSSEE
T ss_pred CCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEE----------ECCCCCCeEEecCCceE
Confidence 3322110000 0123469999999999999999998433 2 2355667776 111112222 2344556
Q ss_pred EecCCeEEEEeEEee-CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 151 IENGSTINLTCVVRF-SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~-~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+..|+++.|.|.+.+ . |.+.+.|++++..+.... ... ...........|.|.++..+|.|.|+|.|.|..|
T Consensus 198 ~~~g~~~~l~C~~~~~~--p~~~i~W~~~~~~~~~~~---~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 269 (289)
T 3ejj_X 198 RIRGEAAQIVCSATNAE--VGFNVILKRGDTKLEIPL---NSD-FQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVG 269 (289)
T ss_dssp CCSSSCEEEEEEEEESS--SCCEEEEEETTEECCCCE---EEE-ECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSC
T ss_pred EEeCCcEEEEEEeCCCC--CceEEEEEECCEEeeccC---Ccc-cccceEEeeEEEEEEeecccCCEEEEEEEEcCCC
Confidence 678999999999998 5 556999999998764211 000 0111122346899999999999999999999998
No 20
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.86 E-value=8.4e-21 Score=150.02 Aligned_cols=185 Identities=16% Similarity=0.250 Sum_probs=117.0
Q ss_pred CcceEEeecC-CCCceEEEEcCCCCCCCeeEEEEEEEEecc--------------------eeEEe------cceeeEEe
Q psy10361 22 DQRFRVINNP-TSDDWTLQLKYPQHKDTGIYECQVSFVRHR--------------------DIHLL------TTGRYTYT 74 (236)
Q Consensus 22 ~~r~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~--------------------~~~~~------~~~~~~~~ 74 (236)
..|+.+.... ...+.+|.|.+++.+|+|.|.|.+.+.... ...+. +...+.|.
T Consensus 52 ~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~l~V~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~ 131 (363)
T 1wio_A 52 NDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCR 131 (363)
T ss_dssp GGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEEETTEEEEEEEEEEEEEESSCSSEESBSCEEEEEECCTTCCCCEEEE
T ss_pred ccceeeeeccccCCeEEEEECCCCHHHCEEEEEEEEECCCcEEEEEEeCCCCCceEEecCCCEEEEEEcCCCCCCeEEEE
Confidence 4566554310 124678999999999999999988754321 00000 12245565
Q ss_pred cCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEec
Q psy10361 75 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIEN 153 (236)
Q Consensus 75 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (236)
+++..... ....|.|.+++.+|+|.|+|.+.+..... ..+.+.|. ..| .. +....+.+
T Consensus 132 ~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~----------~~p-~~-----~~~~~~~~ 190 (363)
T 1wio_A 132 SPRGKNIQ-----GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL----------AFQ-KA-----SSIVYKKE 190 (363)
T ss_dssp CSSSCEEE-----ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEE----------CCS-CS-----EEEEEEET
T ss_pred cCCCcccc-----cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEe----------cCC-CC-----CCceEEec
Confidence 55432222 35689999999999999999998864322 33344444 111 11 14567788
Q ss_pred CCeEEEEeEEeeCC---CCCCeEEEeecCeEEeee-----cCCCceEEEeec-------CcceEEEEEEcccCCCCCeEE
Q psy10361 154 GSTINLTCVVRFSP---EPPAYIFWNHNEAIISYD-----SQRGGVNVITEK-------GETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 154 g~~~~l~C~~~~~p---~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~~L~i~~v~~~d~G~y 218 (236)
|+.+.|.|.+.+.+ .|.+.+.|++++..+... ............ .......|.|.++..+|+|.|
T Consensus 191 G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 270 (363)
T 1wio_A 191 GEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSG 270 (363)
T ss_dssp BCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEE
T ss_pred CCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEE
Confidence 99999999887721 145699999998765321 001122221100 000123799999999999999
Q ss_pred EEEeCCC--CC
Q psy10361 219 QCNPANS--QA 227 (236)
Q Consensus 219 ~C~a~n~--~g 227 (236)
+|.|.|. .|
T Consensus 271 ~C~a~n~~~~g 281 (363)
T 1wio_A 271 NLTLALEAKTG 281 (363)
T ss_dssp EEEECBTTTTC
T ss_pred EEEEEEhhhcC
Confidence 9999999 87
No 21
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.85 E-value=3.9e-20 Score=144.16 Aligned_cols=193 Identities=15% Similarity=0.203 Sum_probs=109.2
Q ss_pred cceEEeecC---CCCceEEEEcCCCCCCCeeEEEEEEEEecc----------eeEEe-----------------------
Q psy10361 23 QRFRVINNP---TSDDWTLQLKYPQHKDTGIYECQVSFVRHR----------DIHLL----------------------- 66 (236)
Q Consensus 23 ~r~~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~----------~~~~~----------------------- 66 (236)
.|+...... ...+.+|.|.+++.+|+|.|.|.+.+.... ...+.
T Consensus 58 ~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l 137 (327)
T 2wng_A 58 PRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSF 137 (327)
T ss_dssp TTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEE
T ss_pred ceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEE
Confidence 466654321 145779999999999999999998764211 00000
Q ss_pred -------cce--eeEEecCCcEEE------EcCCCC----CcEEEEEcCCCCCCCEEEEEEeecCCCce----eEEEEEE
Q psy10361 67 -------TTG--RYTYTNDQRFRV------INNPTS----DDWTLQLKYPQHKDTGIYECQVSTTPHQA----HYIYLTV 123 (236)
Q Consensus 67 -------~~~--~~~~~~~~~~~~------~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~l~v 123 (236)
+.. .+.|.++++... ...... ....|.|.....+|.|.|+|.+.|..+.. ....+.+
T Consensus 138 ~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~ 217 (327)
T 2wng_A 138 TCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSE 217 (327)
T ss_dssp EEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGG
T ss_pred EEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEecc
Confidence 111 466766653321 100011 12357787777778899999999976542 1222211
Q ss_pred EEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceE
Q psy10361 124 VVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTV 202 (236)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 202 (236)
. ...+ +.+..... .+.+|+.+.|.|.+.+.+.|+..+.|++++..+..... .... ...++ ....
T Consensus 218 ~-----------v~~~-P~i~~~~~-~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~-~~~~-~~~~g~~~~~ 282 (327)
T 2wng_A 218 T-----------IRVP-PTLEVTQQ-PVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETA-STVT-ENKDGTYNWM 282 (327)
T ss_dssp T-----------BCBC-CEEEEEEE-CCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEEC-CSCE-ECTTSCEEEE
T ss_pred c-----------cCCC-CEEEEecC-CcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCccc-CceE-ECCCCcEEEE
Confidence 1 0011 11111111 15689999999999986423238999999998865321 1222 12222 2334
Q ss_pred EEEEEcccCCCCCeEEEEEeCCCCCceE
Q psy10361 203 SYLLIQKARPSDNGKYQCNPANSQAKSV 230 (236)
Q Consensus 203 ~~L~i~~v~~~d~G~y~C~a~n~~g~~~ 230 (236)
+.|.|..+..+|+|.|+|.|.|..|..+
T Consensus 283 ~~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 283 SWLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp EEEEC-------CCEEEEEEEETTCCCE
T ss_pred EEEEEccccccCCCEEEEEEEeCCCCCc
Confidence 5788999999999999999999998544
No 22
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.85 E-value=8.5e-20 Score=139.82 Aligned_cols=178 Identities=13% Similarity=0.150 Sum_probs=113.1
Q ss_pred eEEEEcCCCCCCCeeEEEEEEEEecc-----------------eeEE-------e------cc-eeeEE-ecCCcEEEEc
Q psy10361 36 WTLQLKYPQHKDTGIYECQVSFVRHR-----------------DIHL-------L------TT-GRYTY-TNDQRFRVIN 83 (236)
Q Consensus 36 ~~L~i~~~~~~D~G~Y~C~v~~~~~~-----------------~~~~-------~------~~-~~~~~-~~~~~~~~~~ 83 (236)
.+|.|.+++.+|+|.|.|.+.+-... ...+ + +. ..+.| ..++......
T Consensus 57 ~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~ 136 (290)
T 2o26_X 57 NEWIQEKAEATRTGTYTCSNSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTD 136 (290)
T ss_dssp SEEEETTCCGGGCEEEEEEESSSCEEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTT
T ss_pred ceEEEeccCHHhCeEEEEEeeCCccEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCC
Confidence 69999999999999999998640000 0000 0 12 34555 4443221000
Q ss_pred CC--CCCcEEEEEcCCCCCCCE-EEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEecCCeE
Q psy10361 84 NP--TSDDWTLQLKYPQHKDTG-IYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIENGSTI 157 (236)
Q Consensus 84 ~~--~~~~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 157 (236)
.. ......|.|.+++.+|+| .|+|.+.+..+.. ..+.|.|. ..+...+.+ ..+....+..|+++
T Consensus 137 ~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~----------~~~~~~P~i~~~~~~~~v~~G~~v 206 (290)
T 2o26_X 137 LTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVR----------EAIKAIPVVSVPETSHLLKKGDTF 206 (290)
T ss_dssp CEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEE----------CCCCSCCEEECSCSBCCCCTTCCE
T ss_pred CceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEE----------eCCCCCCccccCCCcceEecCCcE
Confidence 00 002347999999999999 9999999975432 34666665 111122223 23445577899999
Q ss_pred EEEeEEeeCCCCCCeEEEeecCeEE----eeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 158 NLTCVVRFSPEPPAYIFWNHNEAII----SYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 158 ~l~C~~~~~p~p~~~v~W~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|.|.+.+.|.| ..+.|++++..+ .. ... ..+.........+.|.|.++..+|+|.|+|.|.|..|
T Consensus 207 ~l~C~~~g~p~p-~~i~W~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g 276 (290)
T 2o26_X 207 TVVCTIKDVSTS-VNSMWLKMNPQPQHIAQV-KHN--SWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFG 276 (290)
T ss_dssp EEEEEEEESSTT-CEEEEEEESSSEEECCCE-ECC--EEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSC
T ss_pred EEEEEEecCCcc-eeEEEecCCCCCccceee-ccc--ccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCC
Confidence 999999998533 249999998763 21 111 1111110112345899999999999999999999998
No 23
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.85 E-value=4.3e-20 Score=143.95 Aligned_cols=188 Identities=19% Similarity=0.279 Sum_probs=121.2
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEec--------------c-------------------e-eEEe
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRH--------------R-------------------D-IHLL 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~--------------~-------------------~-~~~~ 66 (236)
...|+.+.. ....+.+|.|.+++.+|+|.|.|.+..... + + ..+.
T Consensus 78 ~~~r~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~ 156 (331)
T 3u83_A 78 YRERVEFLR-PSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVAT 156 (331)
T ss_dssp CTTTEEESS-CSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEE
T ss_pred cCCceEecc-cCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEE
Confidence 457877762 345678999999999999999998542100 0 0 0000
Q ss_pred -------cceeeEEecC--CcEE---EEcCCC--CCcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCC
Q psy10361 67 -------TTGRYTYTND--QRFR---VINNPT--SDDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDG 131 (236)
Q Consensus 67 -------~~~~~~~~~~--~~~~---~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~ 131 (236)
+...+.|.++ +... ...... .....|.|..++.+|+|.|+|.+.+..+. +..+.|.|..
T Consensus 157 C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~------ 230 (331)
T 3u83_A 157 CTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY------ 230 (331)
T ss_dssp EEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE------
T ss_pred EEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec------
Confidence 1123455442 1111 110100 11246889999999999999999998654 3566677661
Q ss_pred cccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCe-EEEeecCeEEeeecCCCceEEEeecCcceEEEEEEc-c
Q psy10361 132 KYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAY-IFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQ-K 209 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~-~ 209 (236)
. +...+.......+..|+++.|.|.+.+.|. +. +.|++++..+.. ... .... +|.|. +
T Consensus 231 ----~--P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~~i~W~~~~~~~~~-----~~~--~~~~-----~L~i~~~ 290 (331)
T 3u83_A 231 ----E--PEVTIEGFDGNWYLQRMDVKLTCKADANPP--ATEYHWTTLNGSLPK-----GVE--AQNR-----TLFFKGP 290 (331)
T ss_dssp ----E--EEEEEECCCSCCBTTCCCEEEEEEEEEESC--CCEEEEEETTBSCCT-----TEE--EETT-----EEEECSC
T ss_pred ----C--CeEEEecCCCceEeCCCeEEEEEeCcCCCC--CCEEEEEECCCcccc-----cce--ecCc-----EEEEeCC
Confidence 1 112222233445678999999999999854 46 999999876632 111 1222 79999 8
Q ss_pred cCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 210 ARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
+..+|.|.|+|.|.|..| .++.|.|.
T Consensus 291 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 291 INYSLAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred CccccCeEEEEEEEeccccceEEEEEEEe
Confidence 999999999999999998 34444443
No 24
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=4e-21 Score=150.03 Aligned_cols=134 Identities=22% Similarity=0.320 Sum_probs=90.8
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCccccc--CCCcEEEecCCeEEEEeEEee
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDII--GGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~l~C~~~~ 165 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. ..+...+.+. .+....+..|+++.|.|.+.+
T Consensus 179 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~----------~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g 248 (334)
T 1ry7_B 179 QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL----------ERSPHRPILQAGLPANQTAVLGSDVEFHCKVYS 248 (334)
T ss_dssp TTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEE----------CCCCSSCBCCTTCSCCEEEESSCCEEECCCCBC
T ss_pred eEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEe----------cCCCCCCceEecCCCceEEeCCCCEEEEEEEec
Confidence 4589999999999999999999987543 56677776 1111222222 235678899999999999998
Q ss_pred CCCCCCeEEEee----cCeEEeeecCCCceEEEeecC----cceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 166 SPEPPAYIFWNH----NEAIISYDSQRGGVNVITEKG----ETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 166 ~p~p~~~v~W~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
. |.+.+.|++ ++..+...... ........+ ....+.|.|.++..+|+|.|+|.|.|..| .++.|.|
T Consensus 249 ~--p~p~v~W~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 325 (334)
T 1ry7_B 249 D--AQPHIQWLKHVEVNGSKVGPDGTP-YVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVV 325 (334)
T ss_dssp S--SCEEEEEEECCCGGGCSBCTTSSB-CCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEE
T ss_pred C--CCCeEEEEECCcCCCccccCCCCe-eEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEE
Confidence 8 445999999 56555321110 001001100 00123699999999999999999999998 3445555
Q ss_pred c
Q psy10361 235 L 235 (236)
Q Consensus 235 ~ 235 (236)
.
T Consensus 326 ~ 326 (334)
T 1ry7_B 326 L 326 (334)
T ss_dssp E
T ss_pred E
Confidence 4
No 25
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.85 E-value=3.4e-21 Score=151.35 Aligned_cols=185 Identities=17% Similarity=0.187 Sum_probs=90.4
Q ss_pred eEEEEcCCCCCCCeeEEEEEEEEecce--------------------------------eEEe-----------cceeeE
Q psy10361 36 WTLQLKYPQHKDTGIYECQVSFVRHRD--------------------------------IHLL-----------TTGRYT 72 (236)
Q Consensus 36 ~~L~i~~~~~~D~G~Y~C~v~~~~~~~--------------------------------~~~~-----------~~~~~~ 72 (236)
.+|.|.+++.+|+|.|.|.+.+..+.. ..+. +...+.
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~ 158 (349)
T 4dep_C 79 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTIT 158 (349)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEE
T ss_pred CEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEE
Confidence 489999999999999999887522100 0000 112355
Q ss_pred EecCCcEEEEcC-CCCCcEEEEEcCCCCCCCEEEEEEeecCC-Cc----eeEEEEEEEEEEeeCCcccccCCCcccccCC
Q psy10361 73 YTNDQRFRVINN-PTSDDWTLQLKYPQHKDTGIYECQVSTTP-HQ----AHYIYLTVVVLVINDGKYLLVPEPETDIIGG 146 (236)
Q Consensus 73 ~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
|.+++....... ....+..|.|.+++.+|+|.|+|.+.+.. +. +..+.|.|. ..+.. ...+.+..+
T Consensus 159 W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~-----~~~~~---~~~p~i~~~ 230 (349)
T 4dep_C 159 WYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVV-----GSPKN---AVPPVIHSP 230 (349)
T ss_dssp EEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEE-----CCGGG---CCSCEEC--
T ss_pred EeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEE-----ccCCC---CCCCeEecC
Confidence 555543220000 00122479999999999999999999864 33 345555555 00000 002333333
Q ss_pred C--c-EEEecCCeEEEEeEEeeC--CCCCCeEEEeecCeEEeeecCCCceEEEe----ecCcceEEEEEEcccCCCCC-e
Q psy10361 147 P--E-VFIENGSTINLTCVVRFS--PEPPAYIFWNHNEAIISYDSQRGGVNVIT----EKGETTVSYLLIQKARPSDN-G 216 (236)
Q Consensus 147 ~--~-~~~~~g~~~~l~C~~~~~--p~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~i~~v~~~d~-G 216 (236)
. . ..+..|+++.|.|.+.+. ..|.+.+.|++++..+.....+....... ..+....++|.|.++..+|. |
T Consensus 231 ~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G 310 (349)
T 4dep_C 231 NDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKR 310 (349)
T ss_dssp --------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC------------
T ss_pred CCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCC
Confidence 2 1 267889999999999854 12556999999998775411111110000 01112345699999999999 9
Q ss_pred EEEEEeCCCCCc
Q psy10361 217 KYQCNPANSQAK 228 (236)
Q Consensus 217 ~y~C~a~n~~g~ 228 (236)
.|+|.|.|..|.
T Consensus 311 ~Y~C~a~N~~G~ 322 (349)
T 4dep_C 311 SYVCHARSAKGE 322 (349)
T ss_dssp -CEEEEECSSCE
T ss_pred cEEEEEEcCCCc
Confidence 999999999983
No 26
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.85 E-value=4.5e-20 Score=139.07 Aligned_cols=167 Identities=18% Similarity=0.232 Sum_probs=115.2
Q ss_pred CceEEEEcCCCCCCCeeEEEEEEEEeccee-------------------------EEe-------cceeeEEecCCcEEE
Q psy10361 34 DDWTLQLKYPQHKDTGIYECQVSFVRHRDI-------------------------HLL-------TTGRYTYTNDQRFRV 81 (236)
Q Consensus 34 ~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~-------------------------~~~-------~~~~~~~~~~~~~~~ 81 (236)
.+.+|.|.+++.+|+|.|.|.+.+...... .+. +...+.|.+++....
T Consensus 46 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~ 125 (262)
T 3rjd_A 46 STPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK 125 (262)
T ss_dssp CSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred cCCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc
Confidence 357899999999999999999875322110 000 112456665554432
Q ss_pred EcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEE
Q psy10361 82 INNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLT 160 (236)
Q Consensus 82 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~ 160 (236)
... ....|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .+.+.+.+.......+..|+.+.|.
T Consensus 126 ~~~---~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~-----------~~~~~p~~~~~~~~~~~~g~~~~l~ 191 (262)
T 3rjd_A 126 FFH---WNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVK-----------ELFPAPVLNASVTSPLLEGNLVTLS 191 (262)
T ss_dssp EEE---ECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEE-----------CSSCCCEEEESSCSSEETTCCEEEE
T ss_pred ccC---CCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEec-----------cCCCCCeEeecCceeecCCCeEEEE
Confidence 211 24579999999999999999999877433 55667776 1112333333334567889999999
Q ss_pred eEEeeCCC-CCC--eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 161 CVVRFSPE-PPA--YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 161 C~~~~~p~-p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|.+.+.|. |.. .+.|++++..+.... .. ..|.|.++..+|+|.|+|.|.|..|.
T Consensus 192 C~~~~~p~~p~~~~~~~w~~~~~~~~~~~---------~~-----~~L~i~~v~~~d~G~Y~C~a~n~~G~ 248 (262)
T 3rjd_A 192 CETKLLLQRPGLQLYFSFYMGSKTLRGRN---------TS-----SEYQILTARREDSGLYWCEAATEDGN 248 (262)
T ss_dssp EECCCCCC-----EEEEEEETTEEEEEEE---------SC-----CEEEESSCCGGGCEEEEEEEEETTSS
T ss_pred eEcccCCCCCCccEEEEEEeCCcEecccC---------CC-----ceEEEEEechhhCeEEEEEEEcccCc
Confidence 99998854 311 378999998775321 11 37999999999999999999999984
No 27
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.85 E-value=1.5e-20 Score=143.96 Aligned_cols=179 Identities=15% Similarity=0.178 Sum_probs=112.0
Q ss_pred CceEEEEcCCCCCCCeeEEEEEEEEecce---------------------eEEe-------------cc--eeeEEecC-
Q psy10361 34 DDWTLQLKYPQHKDTGIYECQVSFVRHRD---------------------IHLL-------------TT--GRYTYTND- 76 (236)
Q Consensus 34 ~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~---------------------~~~~-------------~~--~~~~~~~~- 76 (236)
...+|.|.+++.+|+|.|.|.+.+..+.. ..+. +. ..+.|..+
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~ 128 (292)
T 4dkd_C 49 SSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVR 128 (292)
T ss_dssp TEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGG
T ss_pred ceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecC
Confidence 46799999999999999999876522110 0000 11 23455433
Q ss_pred CcEEEEcC--CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEE
Q psy10361 77 QRFRVINN--PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (236)
+....... .......|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. ..+...+.+ ..+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~----------~~~~~~p~i~~~~~~~~~ 198 (292)
T 4dkd_C 129 GRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQ----------KVIPGPPALTLVPAELVR 198 (292)
T ss_dssp GCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEE----------CCCCSSCEEEEESSCBCC
T ss_pred CCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEe----------CCCCCCCeEEccCCceeE
Confidence 22110000 00122349999999999999999999765433 46677776 111112222 22334455
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|+.+.|.|.+.+.| |+..+.|++++..+.... .... ........+.|.|.++..+|.|.|+|.|.|..|
T Consensus 199 ~~g~~v~l~C~~~~~~-~~~~~~w~~~~~~~~~~~---~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 269 (292)
T 4dkd_C 199 IRGEAAQIVCSASSVD-VNFDVFLQHNNTKLAIPQ---QSDF-HNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQG 269 (292)
T ss_dssp CSSSCEEEEEEEEESS-SCCEEECCBSSCCCCCCB---EEEE-ETTEEEEEEEEEESSCCTTSCEEEEEEEECSSC
T ss_pred ecCCCEEEEEEecCCC-CceEEEEeCCCcccccCc---ccee-ccceeeeEEEEEECccChhcCeEEEEEEecCCC
Confidence 6899999999999875 446789998886553211 1111 111112335899999999999999999999998
No 28
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.85 E-value=8.5e-20 Score=147.57 Aligned_cols=188 Identities=18% Similarity=0.274 Sum_probs=120.0
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEec-----------------ceeEEe------------------
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRH-----------------RDIHLL------------------ 66 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~-----------------~~~~~~------------------ 66 (236)
..|+.... .+.+.+|.|.+++.+|+|.|.|.+.+... +.+.+.
T Consensus 63 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~ 140 (438)
T 1qgc_4 63 PDRFSGSG--SRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFL 140 (438)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEE
T ss_pred cCcEEEEc--cCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEE
Confidence 46777765 34578999999999999999999875321 000000
Q ss_pred ----cce-eeEEecCCcEEEEc---------CCCC---CcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEee
Q psy10361 67 ----TTG-RYTYTNDQRFRVIN---------NPTS---DDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVIN 129 (236)
Q Consensus 67 ----~~~-~~~~~~~~~~~~~~---------~~~~---~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~ 129 (236)
+.. .+.|.+++...... .... ....|.|.+++.+|+|.|+|.|.+..+.. .+.+.+.
T Consensus 141 ~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~~~----- 214 (438)
T 1qgc_4 141 NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS-PIVKSFN----- 214 (438)
T ss_dssp EEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS-CEEEEEE-----
T ss_pred ccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC-ceecccc-----
Confidence 112 46776665432110 0000 13479999999999999999999876543 2333333
Q ss_pred CCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEeee--------------cCCCceEE
Q psy10361 130 DGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAIISYD--------------SQRGGVNV 193 (236)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~~~--------------~~~~~~~~ 193 (236)
.......+..+....+.+|+++.|.|.+.+.|.+.+.+.|+++ +..+... ...++...
T Consensus 215 ------~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 288 (438)
T 1qgc_4 215 ------RNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTI 288 (438)
T ss_dssp ------TTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEE
T ss_pred ------cccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEE
Confidence 1112222333456678899999999999998533568999986 4333210 01234443
Q ss_pred EeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 194 ITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 194 ~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
..+. ......|.|.++..+|+|.|+|.|.|
T Consensus 289 ~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n 318 (438)
T 1qgc_4 289 SRDN-AKNTLYLQMSSLRSADTAMYYCVRRE 318 (438)
T ss_dssp EEET-TTTEEEEEECSCCGGGCCEEEEEECC
T ss_pred Eeec-CCCeEEEEECCCChhhCEEEEEEEEc
Confidence 3321 12345899999999999999999998
No 29
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.84 E-value=1.3e-18 Score=125.14 Aligned_cols=158 Identities=16% Similarity=0.225 Sum_probs=108.7
Q ss_pred CCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEE
Q psy10361 46 KDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVV 125 (236)
Q Consensus 46 ~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~ 125 (236)
++.-...|.+..... +...+.|.+++...........+..|.|.+++.+|+|.|+|.+.+.......+.|.|.
T Consensus 18 G~~v~l~C~~~~~~~------~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~l~V~- 90 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSH------TLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVK- 90 (190)
T ss_dssp SSCEEEEEEEEECSS------CEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE-
T ss_pred CceEEEEEEeccCCC------CceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeCCcccccEEEEEe-
Confidence 667777887764321 1124456655543221111224678999999999999999999988323466777777
Q ss_pred EEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEee--cCeEEeeecCCCceEEEeecCcceEE
Q psy10361 126 LVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNH--NEAIISYDSQRGGVNVITEKGETTVS 203 (236)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (236)
.++.....+....+..|+.+.|.|.+.+.| .+.+.|++ ++..+.......+....... ...
T Consensus 91 ------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~---~~~ 153 (190)
T 2wv3_A 91 ------------AAPDITGHKRSENKNEGQDAMMYCKSVGYP--HPEWMWRKKENGVFEEISNSSGRFFIINKE---NYT 153 (190)
T ss_dssp ------------CCCEEEEECSEEEEETTSCEEEEEEEECSS--CCEEEEEEEETTEEEECCCTTSCEEEEECS---SEE
T ss_pred ------------cCCcccccCCcceeeCCCcEEEEEEeCccC--CCceEEEEcCCCceeeeecCCCeEEEecCC---Cee
Confidence 222222334566789999999999999984 45999999 77766543333444443332 235
Q ss_pred EEEEcccC-CCCCeEEEEEeCCCCC
Q psy10361 204 YLLIQKAR-PSDNGKYQCNPANSQA 227 (236)
Q Consensus 204 ~L~i~~v~-~~d~G~y~C~a~n~~g 227 (236)
+|.|.++. .+|.|.|+|.|.|..|
T Consensus 154 ~L~i~~~~~~~d~G~Y~C~a~N~~g 178 (190)
T 2wv3_A 154 ELNIVNLQITEDPGEYECNATNSIG 178 (190)
T ss_dssp EEEECSCCTTTSCEEEEEEEECSSC
T ss_pred EEEEEeccccCCCEEEEEEEEecCC
Confidence 79999999 7999999999999998
No 30
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.84 E-value=2.4e-19 Score=155.51 Aligned_cols=179 Identities=23% Similarity=0.307 Sum_probs=118.5
Q ss_pred eEEEEcCCCCCCCeeEEEEEEEEecce-----eEE-----------------------------ecceeeEEecCCcEEE
Q psy10361 36 WTLQLKYPQHKDTGIYECQVSFVRHRD-----IHL-----------------------------LTTGRYTYTNDQRFRV 81 (236)
Q Consensus 36 ~~L~i~~~~~~D~G~Y~C~v~~~~~~~-----~~~-----------------------------~~~~~~~~~~~~~~~~ 81 (236)
.+|.|.+++.+|+|.|.|.+.+..+.. ..+ .+...+.|.+++....
T Consensus 306 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~ 385 (816)
T 3dmk_A 306 GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG 385 (816)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECS
T ss_pred ceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECC
Confidence 499999999999999999987533211 000 0112345555543321
Q ss_pred EcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEE
Q psy10361 82 INNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLT 160 (236)
Q Consensus 82 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~ 160 (236)
.....|.|.+++.+|+|.|+|.+.+..+.. ....+.|. ....++.....+....+.+|+.+.|.
T Consensus 386 -----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~----------~~~~~p~i~~~~~~~~v~~G~~v~L~ 450 (816)
T 3dmk_A 386 -----HSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLG----------GRFDPPVIRQAFQEETMEPGPSVFLK 450 (816)
T ss_dssp -----CCSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECC----------CSSCCCEEEEECCCEEECSSSCEEEE
T ss_pred -----CCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEc----------cccCCCceEecCcceEEcCCCCEEEE
Confidence 134679999999999999999999876543 33444443 01112222223445678899999999
Q ss_pred eEEeeCCCCCCeEEEeecCeEEeeecCCCceEEE--eecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 161 CVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVI--TEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 161 C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
|.+.+.| .+.+.|++++..+... .+.... ........+.|.|.++..+|.|.|+|.|.|..| .++.|.|
T Consensus 451 C~~~g~p--~p~v~W~~~g~~l~~~---~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 524 (816)
T 3dmk_A 451 CVAGGNP--TPEISWELDGKKIANN---DRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNV 524 (816)
T ss_dssp EEEECSS--CCEEEEEETTEECCSC---TTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEecCC--CCEEEEEECCEECCCC---CCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEE
Confidence 9999984 4599999999887432 122111 011112345799999999999999999999998 3344444
No 31
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.84 E-value=1.6e-18 Score=145.06 Aligned_cols=196 Identities=16% Similarity=0.251 Sum_probs=122.8
Q ss_pred CcceEEeecC-CCCceEEEEcCCCCCCCeeEEEEEEEEecce-----------------------eEEe-----cc---e
Q psy10361 22 DQRFRVINNP-TSDDWTLQLKYPQHKDTGIYECQVSFVRHRD-----------------------IHLL-----TT---G 69 (236)
Q Consensus 22 ~~r~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~-----------------------~~~~-----~~---~ 69 (236)
..|+.+...+ ....++|.|.+++.+|+|.|.|.+.+..+.. ..+. +. .
T Consensus 170 ~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~~~G~~v~l~C~~~~~~~~~~ 249 (585)
T 2ocw_A 170 TGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVA 249 (585)
T ss_pred cCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCceeEEcCCCcEEEEEEcCCCCCCce
Confidence 4566665422 2345689999999999999999988543210 0000 01 2
Q ss_pred eeEEe-cCC-------------------cEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-----eEEEEEEE
Q psy10361 70 RYTYT-NDQ-------------------RFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-----HYIYLTVV 124 (236)
Q Consensus 70 ~~~~~-~~~-------------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~l~v~ 124 (236)
...|. +++ ++.+......+...|.|.+++.+|+|.|+|.+.|..... ..+.|.|.
T Consensus 250 ~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~ 329 (585)
T 2ocw_A 250 KFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVN 329 (585)
T ss_pred EEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEe
Confidence 34453 443 111111111223379999999999999999999864333 56667776
Q ss_pred EEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeE----EEee--cCe--EEeee------cCCCc
Q psy10361 125 VLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYI----FWNH--NEA--IISYD------SQRGG 190 (236)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v----~W~~--~~~--~~~~~------~~~~~ 190 (236)
.++.....+....+.+|+++.|.|.+.+.|.| .+ .|++ ++. .+... ...++
T Consensus 330 -------------~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p--~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r 394 (585)
T 2ocw_A 330 -------------EESTIPRSPTVVKGVAGSSVAVLCPYNRKESK--SIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGR 394 (585)
T ss_pred -------------cccccccCCcceEEEeCCcEEEEEecCCCCCc--cEEEEEEEEccCCCCCceeeeecceeecccCCC
Confidence 22222233556778899999999999988544 54 7998 776 44321 11223
Q ss_pred eEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 191 VNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 191 ~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
+.+... ......+|.|.++..+|+|.|+|.| |..| ..+.|.|
T Consensus 395 ~~~~~~-~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V 439 (585)
T 2ocw_A 395 LSLLEE-PGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKI 439 (585)
T ss_pred EEEecc-CCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEE
Confidence 333221 1112346999999999999999999 8877 3445555
No 32
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.83 E-value=4.9e-19 Score=149.76 Aligned_cols=182 Identities=21% Similarity=0.350 Sum_probs=123.3
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce------eEEe----------------------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD------IHLL---------------------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~------~~~~---------------------------- 66 (236)
.+.|+.+.. .+.+|.|.+++.+|+|.|.|.+.+..+.. ..+.
T Consensus 331 ~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 406 (642)
T 1e07_A 331 VSPRLQLSN----DNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA 406 (642)
T ss_pred CcCCEEEeC----CCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcC
Confidence 344555443 34689999999999999999988644221 0000
Q ss_pred --cceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce---eEEEEEEEEEEeeCCcccccCCCcc
Q psy10361 67 --TTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA---HYIYLTVVVLVINDGKYLLVPEPET 141 (236)
Q Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~l~v~~~~~~~~~~~~~~~~~~ 141 (236)
+...+.|.+++... .....|.|.+++.+|+|.|+|.|.|..+.. ..+.+.|. .+...+
T Consensus 407 g~p~~~i~W~~~g~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~-----------~~~~~p 469 (642)
T 1e07_A 407 SNPPAQYSWLIDGNIQ------QHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVS-----------AELPKP 469 (642)
T ss_pred ccCCCeEEEEECCEEc------CCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEe-----------ccCCCc
Confidence 11234555444322 134579999999999999999999976532 33444444 112233
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
.+.......+..|+++.|.|.+.+ |.+.+.|++++..+.. ..++.+.... ..|.|.++..+|.|.|+|.
T Consensus 470 ~i~~~~~~~v~~g~~v~l~C~~~~---~~~~i~W~~~g~~l~~---~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~ 538 (642)
T 1e07_A 470 SISSNNSKPVEDKDAVAFTCEPEA---QNTTYLWWVNGQSLPV---SPRLQLSNGN-----RTLTLFNVTRNDARAYVCG 538 (642)
T ss_pred eEecCCceeecCCCeEEEEEECCC---CCcEEEEEECCEeCCC---CCcEEEcCCC-----cEEEEeecChhcCceEEEE
Confidence 444445567889999999999983 4469999999988743 2233332222 3799999999999999999
Q ss_pred eCCCCCc----eEEEEE
Q psy10361 222 PANSQAK----SVMVNV 234 (236)
Q Consensus 222 a~n~~g~----~~~~~v 234 (236)
|.|..|. .+.|.|
T Consensus 539 a~n~~g~~~s~~~~l~V 555 (642)
T 1e07_A 539 IQNSVSANRSDPVTLDV 555 (642)
T ss_pred eEcCCCCccCCCEEEEE
Confidence 9999983 355555
No 33
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.83 E-value=2.8e-19 Score=142.58 Aligned_cols=112 Identities=26% Similarity=0.479 Sum_probs=87.4
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCc-EEEecCCeEEEEeEEeeC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPE-VFIENGSTINLTCVVRFS 166 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~ 166 (236)
..|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|. .++.....+.. ..+..|+++.|.|.+.+.
T Consensus 270 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~-------------~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~ 336 (395)
T 1bih_A 270 KRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV-------------SAPKYEQKPEKVIVVKQGQDVTIPCKVTGL 336 (395)
T ss_dssp SEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEE-------------EEEEEEECCCSEEEECTTSCEEEECEEEEE
T ss_pred ceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEE-------------cCCccccCCCcceEecCCCeEEEEEEECcc
Confidence 379999999999999999999987653 36777777 12222223333 678899999999999998
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| .+.+.|++++..+.. +++.. .++ .|.|.++..+|+|.|+|.|.|..|
T Consensus 337 p--~p~v~W~~~g~~~~~----~~~~~--~~~-----~L~i~~~~~~d~G~Y~C~a~N~~G 384 (395)
T 1bih_A 337 P--APNVVWSHNAKPLSG----GRATV--TDS-----GLVIKGVKNGDKGYYGCRATNEHG 384 (395)
T ss_dssp S--CCCCEEEETTEECCS----SSEEE--ETT-----EEEESSCCSTTCEEEEEEEEETTE
T ss_pred c--CCeeEEEECCEECCC----CceEE--ECC-----EEEEeeCCcccCEEEEEEEEccCC
Confidence 5 458999999988742 23332 232 799999999999999999999998
No 34
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.83 E-value=5.8e-19 Score=142.23 Aligned_cols=184 Identities=9% Similarity=0.099 Sum_probs=105.7
Q ss_pred ceEEEEcCCCCCCCeeEEEEEEEEeccee-----EE----------------------------ecceeeEEecCCcEEE
Q psy10361 35 DWTLQLKYPQHKDTGIYECQVSFVRHRDI-----HL----------------------------LTTGRYTYTNDQRFRV 81 (236)
Q Consensus 35 ~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~-----~~----------------------------~~~~~~~~~~~~~~~~ 81 (236)
..+|.|.+++.+|+|.|.|.+.+..+... .+ .|...+.|.+++....
T Consensus 102 ~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~ 181 (423)
T 3qs7_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGE 181 (423)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-----
T ss_pred EEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCc
Confidence 35799999999999999999886432210 00 0122355555433211
Q ss_pred EcCCCCCcEEEEEcC-CCCCCCEEEEEEeecCCCceeE--EEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEE
Q psy10361 82 INNPTSDDWTLQLKY-PQHKDTGIYECQVSTTPHQAHY--IYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTIN 158 (236)
Q Consensus 82 ~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~~~~~~~~~--~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (236)
..........+.... ++..|+|.|+|.|.|..+.... +.|.|. ..+ .. .+....+.+|+++.
T Consensus 182 ~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~-------------~~p-~~-~~~~~~v~~G~~v~ 246 (423)
T 3qs7_E 182 SCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN-------------QTP-QT-TLPQLFLKVGEPLW 246 (423)
T ss_dssp --------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESS-------------SCC-CS-STTEEEEETTSCEE
T ss_pred cccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEe-------------cCC-cc-CCCceEEeCCCeEE
Confidence 000000000111111 1578999999999998876533 334443 111 11 23467788999999
Q ss_pred EEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceEEEEE
Q psy10361 159 LTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSVMVNV 234 (236)
Q Consensus 159 l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~~~~v 234 (236)
|.|.+.+.+ |.+.+.|++++..+.....................+|.|.++..+|+|.|+|.|.|....++.|.|
T Consensus 247 L~C~~~g~~-p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V 321 (423)
T 3qs7_E 247 IRCKAVHVN-HGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTI 321 (423)
T ss_dssp EEEEEEESS-SCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEcCC-CCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEE
Confidence 999999832 446999999987663210000000000000112347999999999999999999999324445555
No 35
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.83 E-value=6.9e-19 Score=145.50 Aligned_cols=186 Identities=17% Similarity=0.188 Sum_probs=120.9
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCe-eEEEEEEEEecce----e--EE-------------------e--------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTG-IYECQVSFVRHRD----I--HL-------------------L-------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~v~~~~~~~----~--~~-------------------~-------- 66 (236)
.+.|+.... +..|.|.+++.+|+| .|.|.+.+..+.. . .+ .
T Consensus 158 ~~~~~~~~~-----~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~ 232 (524)
T 2ec8_A 158 KDLRFIPDP-----KAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT 232 (524)
T ss_dssp SSCEEEEET-----TTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEE
T ss_pred CCCceeECC-----CccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEE
Confidence 445555443 348999999999999 9999987532110 0 00 0
Q ss_pred ------cce-eeEEecCCcE---EEEc----C---CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEe
Q psy10361 67 ------TTG-RYTYTNDQRF---RVIN----N---PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVI 128 (236)
Q Consensus 67 ------~~~-~~~~~~~~~~---~~~~----~---~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~ 128 (236)
+.. .+.|.+++.. .... . .......|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|.
T Consensus 233 C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~---- 308 (524)
T 2ec8_A 233 CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV---- 308 (524)
T ss_dssp EEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEE----
T ss_pred EEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEe----
Confidence 111 2566655433 1100 0 11235789999999999999999999977654 56677776
Q ss_pred eCCcccccCCCccccc--CCCcEEEecCCeEEEEeEEeeCCCCCCe-EEEeecCeEEeeecCCCceEEEeec-CcceEEE
Q psy10361 129 NDGKYLLVPEPETDII--GGPEVFIENGSTINLTCVVRFSPEPPAY-IFWNHNEAIISYDSQRGGVNVITEK-GETTVSY 204 (236)
Q Consensus 129 ~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~l~C~~~~~p~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 204 (236)
.+ +..... ......+.+|+++.|.|.+.+.|. +. +.|++++..+..... +....... .....+.
T Consensus 309 -------~~-p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~--p~~v~W~k~g~~~~~~~~--~~~~~~~~~~~~~~~~ 376 (524)
T 2ec8_A 309 -------DK-GFINIFPMINTTVFVNDGENVDLIVEYEAFPK--PEHQQWIYMNRTFTDKWE--DYPKSENESNIRYVSE 376 (524)
T ss_dssp -------SS-CEEEEEESSCSEEEECTTCCEEEEEEEEEESC--CCEEEEESSSCBCSSSBC--CEESCCSSSCCEEEEE
T ss_pred -------cc-CceEeecCCCceEEEcCCCcEEEEEEEeecCC--CcEEEEEECCeeccCCcc--ceeEEccCCCceeEEE
Confidence 11 111111 123678899999999999999854 46 999999987753221 11111111 1123468
Q ss_pred EEEcccCCCCCeEEEEEeCCCCC
Q psy10361 205 LLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 205 L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.|.++..+|+|.|+|.|.|..|
T Consensus 377 L~i~~v~~~d~G~Y~C~a~N~~g 399 (524)
T 2ec8_A 377 LHLTRLKGTEGGTYTFLVSNSDV 399 (524)
T ss_dssp EEECSCCGGGCEEEEEEEECSSC
T ss_pred EEEeecCcccCeEEEEEEEecCc
Confidence 99999999999999999999998
No 36
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=4.4e-20 Score=134.28 Aligned_cols=129 Identities=19% Similarity=0.242 Sum_probs=87.3
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
..+.|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|. .++.....+....+.+|+++.|.|.+.|.
T Consensus 67 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~-------------~p~~~~~~~~~~~v~~g~~~~l~C~~~G~ 133 (203)
T 4fa8_A 67 NTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVV-------------KPLTLSVHSERSQFPDFSVLTVTCTVNAF 133 (203)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------------EEEEEEEEEEECCSSCSCCEEEEEEEEEE
T ss_pred CEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEec-------------CCceeeecceeEEEcCCCEEEEEEEcCCC
Confidence 56789999999999999999999987654 56777776 22222222334556789999999999999
Q ss_pred CCCCCeEEEeecCeEEeee-cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceEEEEE
Q psy10361 167 PEPPAYIFWNHNEAIISYD-SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSVMVNV 234 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~~~~v 234 (236)
| .|.+.|++++..+... ....++.. ..++ ....|.+.++..+|+|.|+|.|.|..|..-.++|
T Consensus 134 P--~P~v~W~~~~~~~~~~~~~~~r~~~-~~~g--~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v~v 197 (203)
T 4fa8_A 134 P--HPHVQWLMPEGVEPAPTAANGGVMK-EKDG--SLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVYV 197 (203)
T ss_dssp S--CCEEEECCC------------CCEE-CTTS--CEEEEEEEEECSSCCCCEEEEEESSSCEEEEEEE
T ss_pred C--CCEEEEEECCeeecCcccccceEEE-eCCC--CEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEEE
Confidence 5 4599999876544321 11223332 2233 2345666789999999999999999996655544
No 37
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.82 E-value=1.8e-18 Score=146.40 Aligned_cols=176 Identities=19% Similarity=0.328 Sum_probs=119.3
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce----e--EEe----------------------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD----I--HLL---------------------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~----~--~~~---------------------------- 66 (236)
.+.|+.+.. .+.+|.|.+++.+|+|.|.|.+.+..+.. . .+.
T Consensus 153 ~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~ 228 (642)
T 1e07_A 153 VSPRLQLSN----GNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAA 228 (642)
T ss_pred CCCceEEcC----CCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcC
Confidence 445555443 34699999999999999999988643210 0 010
Q ss_pred --cceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce---eEEEEEEEEEEeeCCcccccCCCcc
Q psy10361 67 --TTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA---HYIYLTVVVLVINDGKYLLVPEPET 141 (236)
Q Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~l~v~~~~~~~~~~~~~~~~~~ 141 (236)
+...+.|.+++... .....|.|.+++.+|+|.|+|.+.|..+.. ..+.+.|. .+.+.+
T Consensus 229 g~p~~~i~W~~~g~~i------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~-----------~~~~~p 291 (642)
T 1e07_A 229 SNPPAQYSWFVNGTFQ------QSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVY-----------AEPPKP 291 (642)
T ss_pred CCCCcEEEEEECCeEc------ccCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEE-----------ccCCCC
Confidence 11234555444332 124579999999999999999999876532 34455554 222333
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
.+.......+..|+.+.|.|.+.+. | +.+.|++++..+.. ..+....... ..|.|.++..+|+|.|+|.
T Consensus 292 ~i~~~~~~~~~~g~~v~l~C~~~~~--p-~~v~W~~~g~~l~~---~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~ 360 (642)
T 1e07_A 292 FITSNNSNPVEDEDAVALTCEPEIQ--N-TTYLWWVNNQSLPV---SPRLQLSNDN-----RTLTLLSVTRNDVGPYECG 360 (642)
T ss_pred EEEcCCceeEecCCcEEEEEECCCC--C-ccEEEEECCccCCC---cCCEEEeCCC-----CEEEEeccCcccCeeEEEE
Confidence 4443444556678889999999886 3 48999999987743 1233333333 3799999999999999999
Q ss_pred eCCCCCc
Q psy10361 222 PANSQAK 228 (236)
Q Consensus 222 a~n~~g~ 228 (236)
|.|..|.
T Consensus 361 a~n~~g~ 367 (642)
T 1e07_A 361 IQNELSV 367 (642)
T ss_pred EeCCCCC
Confidence 9999973
No 38
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.81 E-value=1.7e-18 Score=143.08 Aligned_cols=191 Identities=16% Similarity=0.207 Sum_probs=116.3
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEec------c--eeEE------------e---------------
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRH------R--DIHL------------L--------------- 66 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~------~--~~~~------------~--------------- 66 (236)
..||.... .+.+.+|.|.+++.+|+|.|.|.+.+..+ . ...+ .
T Consensus 58 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~ 135 (523)
T 2rcj_C 58 PTRFSGSK--SGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLV 135 (523)
T ss_pred CCcEEEec--CCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEE
Confidence 46777433 44678999999999999999999886321 0 0111 0
Q ss_pred ------cc--eeeEEecCCcEEEEc-------CCCCC----cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEE
Q psy10361 67 ------TT--GRYTYTNDQRFRVIN-------NPTSD----DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVL 126 (236)
Q Consensus 67 ------~~--~~~~~~~~~~~~~~~-------~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~ 126 (236)
+. ..+.|.+++...... ....+ ...|.|.+++.+|+|.|+|.|.+..+.. ..+.+.+.
T Consensus 136 C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~-- 213 (523)
T 2rcj_C 136 CLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC-- 213 (523)
T ss_pred EEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeec--
Confidence 01 146666655322100 00001 1369999999999999999999876432 22222221
Q ss_pred EeeCCcccccCCCccccc-CCCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEE
Q psy10361 127 VINDGKYLLVPEPETDII-GGPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSY 204 (236)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (236)
..+...+.+. ..+...+.+|+.+.|.|.+.+. |.| ..+.|++++..+.... ..... ..+......+.
T Consensus 214 --------~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p-~~v~W~k~g~~~~~~~-~~~~~-~~~g~~~~~s~ 282 (523)
T 2rcj_C 214 --------SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQP-VTVSWNSGALTSGVHT-FPAVL-QSSGLYSLSSV 282 (523)
T ss_pred --------CCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCC-eEEEEecCCcccceEe-CCcEe-cCCCcEEEEEE
Confidence 0111111222 1223345789999999999876 432 3899999987653211 00111 11111223468
Q ss_pred EEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 205 LLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 205 L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|.|.++..+| |.|+|.|.|..|.
T Consensus 283 L~i~~~~~~d-G~Y~C~a~n~~g~ 305 (523)
T 2rcj_C 283 VTVPSSSLGT-QTYICNVNHKPSN 305 (523)
T ss_pred EEechhhcCC-ceEEEEEEeCCCC
Confidence 9999999999 9999999999983
No 39
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.81 E-value=4.3e-18 Score=122.89 Aligned_cols=132 Identities=18% Similarity=0.248 Sum_probs=94.9
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.+..+. ...+.|.|...+.. . ....+..+....+..|+.+.|.|.+.+.|
T Consensus 61 ~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~-----~---~~~~~~~~~~~~~~~g~~~~l~C~~~g~p 132 (197)
T 2j8h_A 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKI-----H---LPKTLEGMGAVHALRGEVVSIKIPFSGKP 132 (197)
T ss_dssp EEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEE-----C---CSSCBTTBEEEEEETTCCCEEEEEEEEES
T ss_pred EEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcC-----C---CCccccccCeEEEeCCCEEEEEEEEEecC
Confidence 458999999999999999999987654 35666777621110 0 11112223456788999999999999984
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcc-cCCCCCeEEEEEeCCCCC---ceEEEEEcC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQK-ARPSDNGKYQCNPANSQA---KSVMVNVLN 236 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~y~C~a~n~~g---~~~~~~v~~ 236 (236)
.+.+.|++++..+.. ..+....... ....|.|.+ +..+|.|.|+|.|.|..| .++.|.|+|
T Consensus 133 --~p~i~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 133 --DPVITWQKGQDLIDN---NGHYQVIVTR---SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp --CCEEEEEESSCEECS---SSSCEEEECS---SEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred --CCcEEEEECCEEeec---CCCEEEEEcC---CceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 459999999988753 1233332222 235899999 999999999999999998 455677765
No 40
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.81 E-value=6.1e-20 Score=143.63 Aligned_cols=182 Identities=19% Similarity=0.228 Sum_probs=113.2
Q ss_pred eEEEEcCCCCCCCeeEEEEEEEEecce------------------------------eEEe-----------cceeeEEe
Q psy10361 36 WTLQLKYPQHKDTGIYECQVSFVRHRD------------------------------IHLL-----------TTGRYTYT 74 (236)
Q Consensus 36 ~~L~i~~~~~~D~G~Y~C~v~~~~~~~------------------------------~~~~-----------~~~~~~~~ 74 (236)
.+|.|.+++.+|+|.|.|.+.+..+.. ..+. +...+.|.
T Consensus 81 ~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~ 160 (339)
T 3o4o_C 81 GALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWY 160 (339)
T ss_dssp TEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCE
T ss_pred CeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEe
Confidence 489999999999999999887522100 0000 01224444
Q ss_pred cCCcEEEEcCC----CCCcEEEEEcCCCCCCCEEEEEEeecCCC-----ceeEEEEEEEEEEeeCCcccccCCCcccc-c
Q psy10361 75 NDQRFRVINNP----TSDDWTLQLKYPQHKDTGIYECQVSTTPH-----QAHYIYLTVVVLVINDGKYLLVPEPETDI-I 144 (236)
Q Consensus 75 ~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~ 144 (236)
+++........ ......|.|.+++.+|+|.|+|.+.|..+ .+..+.|.|.. .+ +...+.+ .
T Consensus 161 k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~-----~~----~~~~P~i~~ 231 (339)
T 3o4o_C 161 KDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK-----KK----EETIPVIIS 231 (339)
T ss_dssp ESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEEC-----CC----CCCCCEECC
T ss_pred cCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEc-----CC----CCCCCEEec
Confidence 43322110000 01235899999999999999999998654 23456666661 00 0012222 2
Q ss_pred CCCcEEEecCCeEEEEeEE---eeCCCCCCeEEEeecCeEEeeecCCC------ceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 145 GGPEVFIENGSTINLTCVV---RFSPEPPAYIFWNHNEAIISYDSQRG------GVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~---~~~p~p~~~v~W~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
.+....+..|+++.|.|.+ .+.|. ++.+.|++++..+......+ +............+.|.|.++..+|.
T Consensus 232 ~~~~~~v~~G~~v~L~C~~~~~~g~P~-~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~ 310 (339)
T 3o4o_C 232 PLKTISASLGSRLTIPCKVFLGTGTPL-TTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDL 310 (339)
T ss_dssp CSCCCCCCCCSCCCCCCCEEESSSCCS-SCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSC
T ss_pred CCceeEeccCCCEEEEEEEECCCCCCC-CceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhc
Confidence 2345567889999999999 77741 56999999987653211111 11111111112234799999999997
Q ss_pred -eEEEEEeCCCCC
Q psy10361 216 -GKYQCNPANSQA 227 (236)
Q Consensus 216 -G~y~C~a~n~~g 227 (236)
|.|+|.|.|.+|
T Consensus 311 ~G~Y~C~a~N~~G 323 (339)
T 3o4o_C 311 HMDFKCVVHNTLS 323 (339)
T ss_dssp CCCCEEEEEETTE
T ss_pred CccEEEEEEeccC
Confidence 999999999998
No 41
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.81 E-value=1e-18 Score=133.65 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=74.9
Q ss_pred CCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEE
Q psy10361 98 QHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFW 175 (236)
Q Consensus 98 ~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W 175 (236)
...|+|.|+|.+.+..+.. ....+.|. .+.++.....+....+.+|+++.|.|.+.+. |.+.+.|
T Consensus 149 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~-----------~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~--p~p~v~W 215 (289)
T 3mjg_X 149 GIFEDRSYICKTTIGDREVDSDAYYVYRL-----------QVSSINVSVNAVQTVVRQGENITLMCIVIGN--EVVNFEW 215 (289)
T ss_dssp ECCCSSEEEEEEEETTEEEECCCEEEEEC-----------CCCCCCCEEEESCSEEETTSCEEEEEEEESC--SSBEEEE
T ss_pred eeccCcEEEEEEEeCCceeeeeeEEEEec-----------CCCCCCcEEeCCcceeEcCCCEEEEEEECCC--CCcceEE
Confidence 3679999999998765432 33455554 1111111222334568899999999999997 5569999
Q ss_pred eecCeEEeeecCCCceEEEeec-CcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 176 NHNEAIISYDSQRGGVNVITEK-GETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
++++....... ......... .......|.|.++..+|+|.|+|.|.|..|
T Consensus 216 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 266 (289)
T 3mjg_X 216 TYPRKESGRLV--EPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVN 266 (289)
T ss_dssp ECTTSSSSCCC--CCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTT
T ss_pred EcCCccCCCcc--cccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCC
Confidence 97765331100 011111111 123446899999999999999999999998
No 42
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.81 E-value=8.8e-19 Score=144.83 Aligned_cols=184 Identities=9% Similarity=0.105 Sum_probs=109.1
Q ss_pred ceEEEEcCCCCCCCeeEEEEEEEEecceeE-----E----------------------------ecceeeEEecCCcEEE
Q psy10361 35 DWTLQLKYPQHKDTGIYECQVSFVRHRDIH-----L----------------------------LTTGRYTYTNDQRFRV 81 (236)
Q Consensus 35 ~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~~-----~----------------------------~~~~~~~~~~~~~~~~ 81 (236)
..+|.|.+++.+|+|.|.|.+.+..+.... + .|...++|..++....
T Consensus 102 ~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~ 181 (527)
T 3qs9_E 102 VVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGE 181 (527)
T ss_dssp EEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-----
T ss_pred EEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCc
Confidence 457999999999999999998764322100 0 0223455554332211
Q ss_pred Ec-CCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeE--EEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEE
Q psy10361 82 IN-NPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHY--IYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTIN 158 (236)
Q Consensus 82 ~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (236)
.. .............++..|+|.|+|.|.|..+.... +.|.|. ..+ .. .+....+.+|+++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~-------------~~p-~~-~p~~~~v~~G~~v~ 246 (527)
T 3qs9_E 182 SCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN-------------QTP-QT-TLPQLFLKVGEPLW 246 (527)
T ss_dssp --------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESS-------------SCC-CC-SCCEEEECTTSCEE
T ss_pred cccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEe-------------ccC-cc-CCCceEEeCCCeEE
Confidence 00 00111122333445689999999999998776532 444444 111 11 34567889999999
Q ss_pred EEeEEe-eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceEEEEEc
Q psy10361 159 LTCVVR-FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSVMVNVL 235 (236)
Q Consensus 159 l~C~~~-~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~~~~v~ 235 (236)
|.|.+. +. |.+.+.|++++..+.....................+|.|.++..+|+|.|+|.|.|....++.|.|.
T Consensus 247 L~C~~~~g~--p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~ 322 (527)
T 3qs9_E 247 IRCKAVHVN--HGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIV 322 (527)
T ss_dssp EEEEEEESS--SCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEccCC--CCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEE
Confidence 999996 77 5569999999876532110000011111111223469999999999999999999983344455553
No 43
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.81 E-value=4.8e-19 Score=141.05 Aligned_cols=123 Identities=24% Similarity=0.316 Sum_probs=80.9
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCcee----EEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQAH----YIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
.+.|.|.+++.+|+|.|+|.+.|..+... ...+.+...... ....+...+..+....+.+|+++.|.|.+.
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~-----~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~ 230 (384)
T 3kld_A 156 TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVM-----GEYEPKIEVQFPETVPAEKGTTVKLECFAL 230 (384)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEEC-----CCEEEEEEEECCSEEEEETTSCEEEEEEEE
T ss_pred CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcc-----cccCCceeecCCCceEecCCCcEEEEEEEe
Confidence 45799999999999999999998764321 112222100000 000111122234466788999999999999
Q ss_pred eCCCCCCeEEEeecC-eEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 165 FSPEPPAYIFWNHNE-AIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+.| .+.+.|++++ ..+.. ........ ..|.|.++..+|+|.|+|.|.|..|.
T Consensus 231 g~P--~p~i~W~k~~~~~~~~-----~~~~~~~~-----~~L~I~~v~~~D~G~Y~C~a~N~~G~ 283 (384)
T 3kld_A 231 GNP--VPTILWRRADGKPIAR-----KARRHKSN-----GILEIPNFQQEDAGSYECVAENSRGK 283 (384)
T ss_dssp EES--CCEEEEEETTCCCCCT-----TCEECTTS-----CEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred ecC--CCcEEEEeCCCccccc-----cceecCCC-----cEEEECCCChhhCEEEEEEEEcCCCe
Confidence 994 4599999854 33321 11111122 27999999999999999999999983
No 44
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.81 E-value=6.6e-19 Score=142.79 Aligned_cols=204 Identities=14% Similarity=0.119 Sum_probs=118.1
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEe------cce--eEEe---------------------------
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVR------HRD--IHLL--------------------------- 66 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~------~~~--~~~~--------------------------- 66 (236)
..|+.+.......+++|.|.+++.+|+|.|.|.+.+.. ... ..+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 144 (444)
T 1igt_B 65 KGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 144 (444)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEE
Confidence 46888876545567899999999999999999987531 100 0000
Q ss_pred -------cce-eeEEecCCcE---E----EEcC-CCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEe--
Q psy10361 67 -------TTG-RYTYTNDQRF---R----VINN-PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVI-- 128 (236)
Q Consensus 67 -------~~~-~~~~~~~~~~---~----~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~-- 128 (236)
+.. .+.|.+++.. . .... .......|.|.+++.+| |.|+|.+.+..+... ....+.....
T Consensus 145 C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~i~~~~~~~ 222 (444)
T 1igt_B 145 CLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK-VDKKIEPRGPTI 222 (444)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE-EEEECCCCCCSC
T ss_pred EEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc-eEEEeccCCCCc
Confidence 111 3455544322 0 0000 00012468899999999 999999999875431 2222210000
Q ss_pred eC-----CcccccC-CCcccccCCCcEE-EecCCeEEEEeEEeeCC--CCCCeEEEeecCeEEeeecCCCceEEEeecCc
Q psy10361 129 ND-----GKYLLVP-EPETDIIGGPEVF-IENGSTINLTCVVRFSP--EPPAYIFWNHNEAIISYDSQRGGVNVITEKGE 199 (236)
Q Consensus 129 ~~-----~~~~~~~-~~~~~~~~~~~~~-~~~g~~~~l~C~~~~~p--~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 199 (236)
.. .+..... .+...+..+.... +..|+++.|.|.+.+.+ .|.+.+.|++++..+.... ........+...
T Consensus 223 ~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~-~~~~~~~~~~~~ 301 (444)
T 1igt_B 223 KPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQ-TQTHREDYNSTL 301 (444)
T ss_dssp CCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTT-CBCCEEECSSSE
T ss_pred ccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcc-cccceeCCCCcE
Confidence 00 0000000 0111122222212 47899999999999873 2345899999997764311 111111111112
Q ss_pred ceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 200 TTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 200 ~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
...+.|.|.++..+|+|.|+|.|.|..|.
T Consensus 302 ~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 330 (444)
T 1igt_B 302 RVVSALPIQHQDWMSGKEFKCKVNNKDLP 330 (444)
T ss_dssp EEEEEEECCHHHHHTTCEEEEEEECTTCS
T ss_pred EEEEEEEEcHHHhccCCcEEEEEEcCCCC
Confidence 34568999999999999999999999873
No 45
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.80 E-value=1.8e-18 Score=150.07 Aligned_cols=172 Identities=15% Similarity=0.259 Sum_probs=117.0
Q ss_pred ceEEEEcCCC-CCCCeeEEEEEEEEecce----eEE--e------------------------------c-ceeeEEecC
Q psy10361 35 DWTLQLKYPQ-HKDTGIYECQVSFVRHRD----IHL--L------------------------------T-TGRYTYTND 76 (236)
Q Consensus 35 ~~~L~i~~~~-~~D~G~Y~C~v~~~~~~~----~~~--~------------------------------~-~~~~~~~~~ 76 (236)
+.+|.|.++. .+|+|.|.|.+.+..+.. ..+ . + ...+.|.++
T Consensus 578 ~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~ 657 (816)
T 3dmk_A 578 NGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLD 657 (816)
T ss_dssp TSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEET
T ss_pred CCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEEC
Confidence 4589999998 699999999998743311 000 0 0 114566655
Q ss_pred CcEEEEc------CCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcE
Q psy10361 77 QRFRVIN------NPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEV 149 (236)
Q Consensus 77 ~~~~~~~------~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (236)
+...... ........|.|.+++.+|+|.|+|.|.|..+.. ....|.|. .++..+..+...
T Consensus 658 g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~-------------~~P~~~~~~~~~ 724 (816)
T 3dmk_A 658 GQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY-------------VPPRWILEPTDK 724 (816)
T ss_dssp TBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEE-------------EEEEEEECCCCE
T ss_pred CeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEE-------------eCCceeeecccc
Confidence 4322100 001235689999999999999999999987654 56677776 122233445567
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee----cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD----SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.+..|+++.|.|.+.|.| .+.+.|++++..+... ....+.. ..++ +|.|.++..+|+|.|+|.|.|.
T Consensus 725 ~v~~G~~v~l~C~~~g~P--~p~i~W~k~~~~~~~~~~~~~~~~~~~--~~~~-----~L~i~~v~~~d~G~Y~C~a~N~ 795 (816)
T 3dmk_A 725 AFAQGSDAKVECKADGFP--KPQVTWKKAVGDTPGEYKDLKKSDNIR--VEEG-----TLHVDNIQKTNEGYYLCEAING 795 (816)
T ss_dssp EEETTCCEEEECEEEEES--CCEEECCEECSSSTTCCBCCCCBTTEE--EETT-----EEEECSCCGGGCEEEEEEEECS
T ss_pred eecCCCcEEEEEEEecCC--CCeEEEEecCCCCCccccccccCCCEE--ecCC-----EEEECcCChhhCeEEEEEEEeC
Confidence 888999999999999995 4599999986543210 0011111 1232 7999999999999999999999
Q ss_pred CCc
Q psy10361 226 QAK 228 (236)
Q Consensus 226 ~g~ 228 (236)
+|.
T Consensus 796 ~G~ 798 (816)
T 3dmk_A 796 IGS 798 (816)
T ss_dssp SSS
T ss_pred CCC
Confidence 994
No 46
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.80 E-value=2.3e-17 Score=120.68 Aligned_cols=128 Identities=23% Similarity=0.394 Sum_probs=89.8
Q ss_pred CcEEEEEcCC-CCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEecCCeEEEEeEEe
Q psy10361 88 DDWTLQLKYP-QHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 88 ~~~~L~i~~~-~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~ 164 (236)
....|.|.++ +.+|+|.|+|.+.+..+.. ..+.|.|.. .+. .+...+.+ ..+....+..|+++.|.|.+.
T Consensus 61 ~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-----~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~ 133 (212)
T 2yd6_A 61 SGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLR-----EDQ--IPRGFPTIDMGPQLKVVERTRTATMLCAAS 133 (212)
T ss_dssp TEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEEC-----GGG--CCTTCCEEEECCCCEEEETTSCEEEEEEEE
T ss_pred CceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEec-----cCc--cCCCcceeecCCcceeEecCCCEEEEEEec
Confidence 3567999999 5999999999999887543 566677761 000 11111222 234456788999999999999
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+. |.+.+.|++++..+.......++...... ....|.|.++..+|.|.|+|.|.|..|
T Consensus 134 g~--p~p~v~W~~~g~~l~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G 191 (212)
T 2yd6_A 134 GN--PDPEITWFKDFLPVDTSNNNGRIKQLRSE---SIGALQIEQSEESDQGKYECVATNSAG 191 (212)
T ss_dssp CS--SCCEEEEEETTEEC------CCEEEEEET---TEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CC--CCCeEEEEECCccccCcCCCceEEEEecC---CeEEEEEcCCCcccCEEEEEEEECCCC
Confidence 98 44599999999887653222334333222 235899999999999999999999998
No 47
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.79 E-value=1.1e-17 Score=120.01 Aligned_cols=117 Identities=21% Similarity=0.290 Sum_probs=87.0
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
...|.|.+++.+|+|.|+|.+.+..+. +..+.|.|. .++.....+....+..|+++.|.|.+.+.
T Consensus 57 ~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~-------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 123 (189)
T 2v44_A 57 RSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIY-------------QKLTFREVVSPQEFKQGEDAEVVCRVSSS 123 (189)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE-------------CCCEEESCCCSEEEETTSCEEECCEEECS
T ss_pred eEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEe-------------cCCceeecCCcEEEeCCCCEEEEEEECcC
Confidence 468999999999999999999987654 355666666 22222233445678899999999999988
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| .+.+.|++++..+.... ..+.... .++ .|.|.++..+|+|.|+|.|.|..|
T Consensus 124 p--~p~v~W~~~~~~~~~~~-~~~~~~~-~~~-----~L~i~~v~~~d~G~Y~C~a~n~~~ 175 (189)
T 2v44_A 124 P--APAVSWLYHNEEVTTIS-DNRFAML-ANN-----NLQILNINKSDEGIYRCEGRVEAR 175 (189)
T ss_dssp S--CCEEEEEEEC--CEECC-CTTEEEC-TTS-----CEEETTCCGGGCEEEEEEEEETTT
T ss_pred C--CCcEEEEECCcEEeccC-CCCEEEe-cCC-----cEEEEEcCcccCeEEEEEEEcccc
Confidence 4 45999999998775421 2233332 222 699999999999999999999996
No 48
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.79 E-value=3.7e-17 Score=117.75 Aligned_cols=130 Identities=16% Similarity=0.284 Sum_probs=92.8
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ....+.|.. .|........+....+..|+.+.|.|.+.+.|
T Consensus 62 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 131 (197)
T 3lcy_A 62 THTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQA----------TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRP 131 (197)
T ss_dssp EEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEE----------EEEECTTSCCCSEEEEETTSCEEEEEEEEEES
T ss_pred EEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEc----------CCCCCCCccCCcceeecCCCeEEEEEEEeeee
Confidence 4589999999999999999999876543 556666662 11111111223456778999999999999984
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCC-CCCeEEEEEeCCCCC---ceEEEEEcC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARP-SDNGKYQCNPANSQA---KSVMVNVLN 236 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~y~C~a~n~~g---~~~~~~v~~ 236 (236)
.+.+.|++++..+.. ..+....... ....|.|.++.. +|.|.|+|.|.|..| .++.|.|.|
T Consensus 132 --~p~v~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 132 --VPAMTWFHGQKLLQN---SENITIENTE---HYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp --CCEEEEEETTEECCC---CSSEEEEECS---SEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred --CCeeEEeECCEECCC---CCceEEEEcC---CEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 459999999988743 2233333222 235799999985 899999999999998 445566653
No 49
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.79 E-value=1.2e-17 Score=133.39 Aligned_cols=119 Identities=22% Similarity=0.341 Sum_probs=87.3
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCC---cccccCCCcEEEecCCeEEEEeEE
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEP---ETDIIGGPEVFIENGSTINLTCVV 163 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~l~C~~ 163 (236)
...|.|.+++.+|+|.|+|.+.+..+. .....+.|. ..|.. ...+..+....+.+|+++.|.|.+
T Consensus 176 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~----------~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 245 (403)
T 3laf_A 176 SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRIL----------SDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV 245 (403)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEE----------CCCCCCEEEEEEECCCCEEEETTSCEEECCEE
T ss_pred CceEEEcccccccCEEEEEEEEcCCCceeccceeEEEe----------cCCCcccCceEecCCCceEecCCCcEEEEEEc
Confidence 457999999999999999999986543 245667776 11111 112233456778899999999999
Q ss_pred eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 164 RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 164 ~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.| .+.+.|++++..+.... ..... .... .|.|.++..+|.|.|+|.|.|..|
T Consensus 246 ~~~p--~~~~~W~~~~~~~~~~~--~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g 299 (403)
T 3laf_A 246 SGYP--PPSFTWLRGEEVIQLRS--KKYSL-LGGS-----NLLISNVTDDDSGTYTCVVTYKNE 299 (403)
T ss_dssp EEES--CCEEEEEETTEECCCSS--SSEEE-ETTT-----EEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCCC--CCeEEEEECCeeccCCC--ceEEE-CCcc-----EEEEeCCCHHHCEEEEEEEEcCCC
Confidence 9984 45999999998774321 12222 2222 799999999999999999999987
No 50
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.78 E-value=7.4e-18 Score=139.31 Aligned_cols=176 Identities=17% Similarity=0.193 Sum_probs=111.9
Q ss_pred EEEEcCCCCCCCeeEEEEEEEEecc-----------------eeE---------------E--e-----cce-eeEEecC
Q psy10361 37 TLQLKYPQHKDTGIYECQVSFVRHR-----------------DIH---------------L--L-----TTG-RYTYTND 76 (236)
Q Consensus 37 ~L~i~~~~~~D~G~Y~C~v~~~~~~-----------------~~~---------------~--~-----~~~-~~~~~~~ 76 (236)
.|.|.+++.+|+|.|.|.+.+..+. ... + . +.. .+.|.++
T Consensus 179 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~ 258 (523)
T 2rcj_C 179 YLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSG 258 (523)
T ss_pred EEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecC
Confidence 7999999999999999998863211 000 0 0 112 4667666
Q ss_pred CcEEE-------EcCCC--CCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCC
Q psy10361 77 QRFRV-------INNPT--SDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGG 146 (236)
Q Consensus 77 ~~~~~-------~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
+.... ..... .....|.|.+++.+| |.|+|.|.|..+.. ....+.+. . .+...+..+
T Consensus 259 g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~-----------~-~P~~~~~~p 325 (523)
T 2rcj_C 259 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPL-----------S-LPSVFLFPP 325 (523)
T ss_pred CcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCC-----------c-CceEEecCC
Confidence 54311 00000 112479999999999 99999999987653 33444443 1 111122223
Q ss_pred CcE-EEecCCeEEEEeEEeeCCC--CCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEe
Q psy10361 147 PEV-FIENGSTINLTCVVRFSPE--PPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 147 ~~~-~~~~g~~~~l~C~~~~~p~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
... .+.+|+++.|.|.+.+.|. |.+.+.|++++..+.... . .......++ ....+.|.|.++..+|+|.|+|.|
T Consensus 326 ~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~-~-~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a 403 (523)
T 2rcj_C 326 KPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAK-T-KPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKV 403 (523)
T ss_pred CchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCc-c-CCceecCCCcEEEEEEEEECHHHhcCCCeEEEEE
Confidence 222 3678999999999998641 235899999998875422 1 111111222 233457999999999999999999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.|..+
T Consensus 404 ~n~~~ 408 (523)
T 2rcj_C 404 SNKAL 408 (523)
T ss_pred eCCCC
Confidence 99876
No 51
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.78 E-value=3.4e-17 Score=117.79 Aligned_cols=122 Identities=22% Similarity=0.250 Sum_probs=90.1
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
....|.|.+++.+|+|.|+|.+.+..+.. ....+.|. ..+.++.....+....+..|+.+.|.|.+.+.
T Consensus 61 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~----------~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 130 (194)
T 2a38_A 61 GRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVK----------AETAPPNFVQRLQSMTVRQGSQVRLQVRVTGI 130 (194)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE----------CCCEEEEEEECCCCEEECTTEEEEEEEEEEEE
T ss_pred CEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEc----------cCCCCCEEEeCCccEEEcCCCEEEEEEEEEEe
Confidence 35689999999999999999999876543 45566665 11111122233446778899999999999998
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| .+.+.|++++..+.. ..+....... ...+|.|.++..+|.|.|+|.|.|..|
T Consensus 131 p--~~~v~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g 183 (194)
T 2a38_A 131 P--TPVVKFYRDGAEIQS---SLDFQISQEG---DLYSLLIAEAYPEDSGTYSVNATNSVG 183 (194)
T ss_dssp S--CCEEEEEETTEECCC---SSSEEEEEET---TEEEEEEEEECGGGCEEEEEEEEETTE
T ss_pred c--CCeEEEEECCEECCC---CCcEEEEEcC---CEEEEEECCCChhcCeEEEEEEEeCCC
Confidence 4 458999999988753 2233333322 234799999999999999999999998
No 52
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=2.6e-17 Score=117.55 Aligned_cols=166 Identities=16% Similarity=0.215 Sum_probs=107.5
Q ss_pred CCCCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEE
Q psy10361 43 PQHKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLT 122 (236)
Q Consensus 43 ~~~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~ 122 (236)
+..++.-...|.+..... +...+.|.+++..............|.|. +.+|+|.|+|.+.+.. ...+.|.
T Consensus 10 v~~G~~v~l~C~~~~~~~------p~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~--~~~~~l~ 79 (184)
T 3b5h_A 10 EDLGSKILLTCSLNDSAT------EVTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEP--MGTANIQ 79 (184)
T ss_dssp EEETTEEEEEEEEESCSS------CCCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTT--SCEEEEE
T ss_pred EecCCCEEEEEECCCCCC------CceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECCc--CcEEEEE
Confidence 445677777887764321 11245666666544332222334466666 6999999999999832 3556777
Q ss_pred EEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEee---cCeEEeeecCCCceEEEeecCc
Q psy10361 123 VVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNH---NEAIISYDSQRGGVNVITEKGE 199 (236)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~---~~~~~~~~~~~~~~~~~~~~~~ 199 (236)
|. . ++.....+....+..|+++.|.|.+.+.| +.+.+.|++ ++..+......+++......
T Consensus 80 V~-----------~--~P~~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-- 143 (184)
T 3b5h_A 80 LH-----------G--PPRVKAVKSSEHINEGETAMLVCKSESVP-PVTDWAWYKITDSEDKALMNGSESRFFVSSSQ-- 143 (184)
T ss_dssp EC-----------C--SCCCEESCSEEEECTTSCEEEEEECCCSS-CCCEEEEEECCSSSCEECCTTGGGTEEEEEET--
T ss_pred Ee-----------c--CCceeecCCCcEEcCCCcEEEEEEECCCC-CCCeEEEEEcCCCCCEEeecCCCCEEEEEecC--
Confidence 76 1 22222334566788999999999999885 156999999 44443321222344443332
Q ss_pred ceEEEEEEcccC-CCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 200 TTVSYLLIQKAR-PSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 200 ~~~~~L~i~~v~-~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
..+.|.|.++. .+|.|.|+|.|.|..| ..+.|.|.
T Consensus 144 -~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 144 -GRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp -TEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred -CeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 34589999999 8999999999999998 34455554
No 53
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=142.55 Aligned_cols=112 Identities=13% Similarity=0.181 Sum_probs=84.1
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccC-CCcEEEecCCeEEEEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIG-GPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
..|.|.+++.+|+|.|+|.|.|. ....+.|.|.. + +...+.. .....+.+|+.+.|.|.+.+.|
T Consensus 290 ~~L~I~~v~~~DsG~Y~C~a~N~--~~~~~~L~V~~-----------~-p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P- 354 (527)
T 3qs9_E 290 LFAFVSSVARNDTGYYTCSSSKH--PSQSALVTIVE-----------K-GFINATNSSEDYEIDQYEEFCFSVRFKAYP- 354 (527)
T ss_dssp EEEEESSCCGGGCEEEEEEETTE--EEEEEEEEEC--------------CEEECCCSCCEECCCTTCCCCEEEEEEEES-
T ss_pred EEEEEccCCcccCeEEEEEEEeC--CCceEEEEEEc-----------c-CccccccCcccEEEcCCCeEEEEEEEEecC-
Confidence 46999999999999999999988 55667777761 1 1111111 1245667899999999999995
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.|++++..+..... . .... .+|.|.++..+|+|.|+|.|.|..|
T Consensus 355 -~p~i~W~k~g~~l~~~~~---~--~~~~-----~~L~I~~v~~~D~G~YtC~A~N~~g 402 (527)
T 3qs9_E 355 -QIRCTWTFSRKSFPCEQK---G--LDNG-----YSISKFCNHKHQPGEYIFHAENDDA 402 (527)
T ss_dssp -CCEEEEEETTEEEECBCC---B--CSSS-----SEEEEECCCTTCCSCEEEEEEETTE
T ss_pred -CCEEEEEECCEECcCCcc---c--ccCC-----cEEEEecCCcccCEEEEEEEEeCCC
Confidence 458999999998854221 1 1122 2799999999999999999999998
No 54
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.78 E-value=1e-17 Score=138.54 Aligned_cols=180 Identities=13% Similarity=0.195 Sum_probs=112.3
Q ss_pred CceEEEEcCCCCCCCeeEEEEEEEEecceeEE------------------------e-------cceeeEEec-CCcEEE
Q psy10361 34 DDWTLQLKYPQHKDTGIYECQVSFVRHRDIHL------------------------L-------TTGRYTYTN-DQRFRV 81 (236)
Q Consensus 34 ~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~~~------------------------~-------~~~~~~~~~-~~~~~~ 81 (236)
.+.+|.|.+++.+|+|.|.|.+.+-......+ + +...+.|.+ ++....
T Consensus 78 ~~~~L~I~~~~~~D~G~Y~C~a~ng~~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~ 157 (524)
T 2ec8_A 78 KQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLP 157 (524)
T ss_dssp CSSEEEESSCCSTTCEEEEEEETTSCEEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCC
T ss_pred ccceEEEcccchhhCEEEEEeecCCcceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcC
Confidence 45799999999999999999986500000000 0 112455643 332210
Q ss_pred EcCC--CCCcEEEEEcCCCCCCCE-EEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEecCC
Q psy10361 82 INNP--TSDDWTLQLKYPQHKDTG-IYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIENGS 155 (236)
Q Consensus 82 ~~~~--~~~~~~L~i~~~~~~d~G-~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~ 155 (236)
.... ......|.|.+++.+|+| .|+|.+.+..+. +..+.|.|. ..+...+.+ ..+....+.+|+
T Consensus 158 ~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~----------~~~~~~p~i~~~~~~~~v~~G~ 227 (524)
T 2ec8_A 158 KDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVR----------PAFKAVPVVSVSKASYLLREGE 227 (524)
T ss_dssp SSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEE----------CCCCSCCEEECSCSEEEEETTS
T ss_pred CCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEE----------eCCCCCCcEEecCCcceEEcCC
Confidence 0000 002347999999999999 999999886543 335677775 111122233 345566889999
Q ss_pred eEEEEeEEeeCCCCCCeEEEeecCeEE--eeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 156 TINLTCVVRFSPEPPAYIFWNHNEAII--SYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 156 ~~~l~C~~~~~p~p~~~v~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
++.|.|.+.+.|.| ..+.|++++..+ ... .......+........|.|.++..+|+|.|+|.|.|..|
T Consensus 228 ~v~L~C~~~g~p~p-~~i~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 297 (524)
T 2ec8_A 228 EFTVTCTIKDVSSS-VYSTWKRENSQTKLQEK---YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFG 297 (524)
T ss_dssp CEEEEEEEEESSTT-CEEEEEETTCSCCCCEE---EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSC
T ss_pred cEEEEEEEecCCCc-EEEEEEeCCCCCccccc---cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCC
Confidence 99999999998533 349999998763 211 011111110122346899999999999999999999998
No 55
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.5e-17 Score=132.55 Aligned_cols=181 Identities=19% Similarity=0.253 Sum_probs=111.7
Q ss_pred CceEEEEcCCCCCCCeeEEEEEEEEecce----e--EE----------------------e--------cceeeEEecCC
Q psy10361 34 DDWTLQLKYPQHKDTGIYECQVSFVRHRD----I--HL----------------------L--------TTGRYTYTNDQ 77 (236)
Q Consensus 34 ~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~----~--~~----------------------~--------~~~~~~~~~~~ 77 (236)
.+.+|.|.+++.+|+|.|.|.+.+..+.. . .+ + +...+.|.+++
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~ 139 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRL 139 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEE
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecC
Confidence 45689999999999999999988632110 0 00 0 11234554432
Q ss_pred --------------cEEEEcCCCCCcEEEEEcCCCCCCCE---EEEEEeecCCCce-eEEEEEEEEEEeeCCcc-cccCC
Q psy10361 78 --------------RFRVINNPTSDDWTLQLKYPQHKDTG---IYECQVSTTPHQA-HYIYLTVVVLVINDGKY-LLVPE 138 (236)
Q Consensus 78 --------------~~~~~~~~~~~~~~L~i~~~~~~d~G---~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~-~~~~~ 138 (236)
++... ..+.|.|.+++.+|+| .|+|.+.+..+.. ........ .....+. .....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 212 (395)
T 1bih_A 140 SGADPNADVTDFDRRITAG-----PDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEI--KGVTKDNSGYKGE 212 (395)
T ss_dssp TTSCGGGCCCCCCTTEEEC-----TTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEE--CCCBCCSSCCCCC
T ss_pred CCcCcccccccccccEEEc-----CCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEe--cccccccccccCC
Confidence 11111 2347999999999999 9999999876543 21111111 0000000 00000
Q ss_pred CcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 139 PETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 139 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
..+.+ .+....+.+|+.+.|.|.+.+.| .+.+.|++++..+.... ..+... .. ......|.|.++..+|.|.|
T Consensus 213 ~~p~~-~~~~~~~~~G~~v~l~C~~~g~p--~~~i~W~~~g~~~~~~~-~~~~~~--~~-~~~~~~L~i~~~~~~d~G~Y 285 (395)
T 1bih_A 213 PVPQY-VSKDMMAKAGDVTMIYCMYGSNP--MGYPNYFKNGKDVNGNP-EDRITR--HN-RTSGKRLLFKTTLPEDEGVY 285 (395)
T ss_dssp CEEEE-ECCSEEEETTSCEEEEEEEECSS--CCCCEEEETTEECCCCT-TSSEES--CS-SSTTSEEEESSCCGGGCEEE
T ss_pred cCcee-cCCceEEECCCcEEEEEEeccCC--CCeEEEEECCEEcCCCC-ceeEEE--Ee-cCCCceEEEccCChhhCEEE
Confidence 11111 24467789999999999999884 45899999998775321 112211 10 01113799999999999999
Q ss_pred EEEeCCCCCc
Q psy10361 219 QCNPANSQAK 228 (236)
Q Consensus 219 ~C~a~n~~g~ 228 (236)
+|.|.|..|.
T Consensus 286 ~C~a~n~~g~ 295 (395)
T 1bih_A 286 TCEVDNGVGK 295 (395)
T ss_dssp EEEECCSSSS
T ss_pred EEEEEeCCCC
Confidence 9999999984
No 56
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.78 E-value=4.3e-17 Score=119.14 Aligned_cols=129 Identities=26% Similarity=0.400 Sum_probs=93.0
Q ss_pred cEEEEEcCCCC-CCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEecCCeEEEEeEEe
Q psy10361 89 DWTLQLKYPQH-KDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 89 ~~~L~i~~~~~-~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~ 164 (236)
...|.|.+++. +|+|.|+|.+.+..+. +..+.|.|.. .+. .+...+.+ ..+....+..|+.+.|.|.+.
T Consensus 63 ~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~-----~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~ 135 (212)
T 2yd1_A 63 ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYE-----GDK--TPAGFPVITQGPGTRVIEVGHTVLMTCKAI 135 (212)
T ss_dssp EEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEEC-----TTC--SCTTCCEEEECCCCEEEETTCCEEECCEEE
T ss_pred eEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEec-----ccC--CCCCCCeeEeCCCceEeecCCeEEEEEEec
Confidence 36899999999 9999999999987765 3666777761 000 00111222 334467788999999999999
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc----eEEEEEc
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK----SVMVNVL 235 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~----~~~~~v~ 235 (236)
+. |.+.+.|++++..+.... .+.. ..++ .|.|.++..+|.|.|+|.|.|..|. .+.|.|.
T Consensus 136 g~--p~p~i~W~~~~~~~~~~~--~~~~--~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 136 GN--PTPNIYWIKNQTKVDMSN--PRYS--LKDG-----FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp CS--SCCEEEEEETTEECCTTS--TTEE--EETT-----EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cC--CCCeEEEEECCeEcccCC--CeEE--ccCC-----eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 98 445899999998875321 2222 2233 7999999999999999999999982 2566654
No 57
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.78 E-value=1.3e-17 Score=119.69 Aligned_cols=121 Identities=21% Similarity=0.344 Sum_probs=90.2
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
....|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .++.....+....+..|+++.|.|.+.+
T Consensus 60 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g 126 (191)
T 1epf_A 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF-------------QKLMFKNAPTPQEFKEGEDAVIVCDVVS 126 (191)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE-------------CCSEEEECCSSEECCTTSCEEECCEEEC
T ss_pred CceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEee-------------cCceEecCCCcEeecCCCeEEEEEEECC
Confidence 46789999999999999999999886433 55556665 2222333455667889999999999998
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceE
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSV 230 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~ 230 (236)
.| .+.+.|++++..+... ...+.... .++ .|.|.++..+|.|.|+|.|.|..+...
T Consensus 127 ~p--~~~v~W~~~~~~~~~~-~~~~~~~~-~~~-----~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 182 (191)
T 1epf_A 127 SL--PPTIIWKHKGRDVILK-KDVRFIVL-SNN-----YLQIRGIKKTDEGTYRCEGRILARGEI 182 (191)
T ss_dssp SS--CCEEEEEETTEEGGGG-CCTTEEEC-TTS-----CEEETTCCGGGCEEEEEEEEEGGGTEE
T ss_pred CC--CCEEEEEECCEEeecc-CCceEEEe-cCC-----eEEECCCChhhCEEEEEEEEEecceeE
Confidence 84 4589999999887532 22233322 222 699999999999999999999996433
No 58
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.78 E-value=6.3e-18 Score=136.21 Aligned_cols=111 Identities=14% Similarity=0.185 Sum_probs=80.7
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCC--CcEEEecCCeEEEEeEEeeCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGG--PEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~p 167 (236)
..|.|.+++.+|+|.|+|.|.|. .+..+.|.|. .++.....+ ....+.+|+++.|.|.+.+.|
T Consensus 290 ~~L~I~~v~~~D~G~Y~C~A~N~--~~~~~~L~V~-------------~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P 354 (423)
T 3qs7_E 290 LFAFVSSVARNDTGYYTCSSSKH--PSQSALVTIV-------------EKGFINATNSSEDYEIDQYEEFCFSVRFKAYP 354 (423)
T ss_dssp EEEEESSCCTTTCEEEEEEETTE--EEEEEEEEEE-------------SSCEEEEC---CEECCCTTCCCCEEEEEEEES
T ss_pred EEEEEeecCHHHCEEEEEEEecC--CCceEEEEEE-------------eCCcceEcCCCccEEecCCCeEEEEEEEEEcC
Confidence 47999999999999999999988 5567788887 121111111 345677899999999999995
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. +.+.|++++..+...... ..... .+.......+|+|.|+|.|.|..|
T Consensus 355 ~--p~i~W~k~g~~l~~~~~~-----~~~~~-----~~~~~~~~~~D~G~YtC~A~N~~G 402 (423)
T 3qs7_E 355 Q--IRCTWTFSRKSFPCEQKG-----LDNGY-----SISKFCNHKHQPGEYIFHAENDDA 402 (423)
T ss_dssp C--CEEEEEETTEEEECBCCB-----CSSSS-----EEEEECCCTTCCSCEEEEEEETTE
T ss_pred C--CeEEEEECCEECCCcccc-----ccCCc-----EEEEEecccccCEEEEEEEEcCCc
Confidence 4 599999999988642210 00010 222345677899999999999998
No 59
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.78 E-value=3.3e-17 Score=119.48 Aligned_cols=139 Identities=23% Similarity=0.251 Sum_probs=90.8
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeC------Cc--ccccCCCcccccCCCcEEEecCCeEEE
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVIND------GK--YLLVPEPETDIIGGPEVFIENGSTINL 159 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~g~~~~l 159 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ..+.+.+....... .+ ....+.+......+....+..|+.+.|
T Consensus 58 ~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 137 (212)
T 2r15_A 58 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 137 (212)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEE
T ss_pred EEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEE
Confidence 4579999999999999999999866543 33333322000000 00 000001111112244678889999999
Q ss_pred EeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 160 TCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 160 ~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
.|.+.+.| .+.+.|++++..+... .+.......+ ..+.|.|.++..+|.|.|+|.|.|..| .++.|.|
T Consensus 138 ~C~~~g~p--~p~v~W~~~~~~~~~~---~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 208 (212)
T 2r15_A 138 TCNVWGDP--PPEVSWLKNEKALAQT---DHCNLKFEAG--RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208 (212)
T ss_dssp EEEEECSS--CCEEEEEETTEEECCC---SSEEEEEETT--TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEcCCC--CceEEEEECCeECccC---CCEEEEEcCC--CEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 99999984 4589999999888542 2334333322 336899999999999999999999998 3344444
No 60
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.77 E-value=3e-18 Score=132.87 Aligned_cols=119 Identities=15% Similarity=0.201 Sum_probs=75.4
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc------eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ------AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTC 161 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C 161 (236)
....|.|.+++.+|+|.|+|.+.|..+. +..+.|.|. .+...+.+...+...+.+|+++.|.|
T Consensus 172 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~-----------~~~~~p~i~~~~~~~v~~G~~v~L~C 240 (316)
T 3vh8_G 172 SKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVT-----------GPYEKPSLSAQPGPKVQAGESVTLSC 240 (316)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEE-----------CSSCCCEEEEESCSCCCTTSCCEEEE
T ss_pred ceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEec-----------CCCCCCeEEeCCCCeecCCCcEEEEE
Confidence 3467999999999999999999987542 455666665 11122222222223567899999999
Q ss_pred EEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 162 VVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 162 ~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.. |.+.+.|++++..+...... .. .........|.|.++. |+|.|+|.|.|..+
T Consensus 241 ~~~~---~~~~~~W~k~g~~~~~~~~~----~~-~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~ 296 (316)
T 3vh8_G 241 SSRS---SYDMYHLSREGGAHERRLPA----VR-KVNRTFQADFPLGPAT--HGGTYRCFGSFRHS 296 (316)
T ss_dssp EESS---CCSEEEEEETTSSCCEEEEC----EE-CTTSCEEEEEECC-------CEEEEEEEBTTB
T ss_pred ECCC---CCcEEEEEECCCcCCCceec----ee-ccCCceeEEEEcCCcC--CCEEEEEEeecCCC
Confidence 9963 44699999998765321100 00 0111123579999998 99999999999654
No 61
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.8e-17 Score=120.87 Aligned_cols=125 Identities=18% Similarity=0.232 Sum_probs=82.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccc--------c----CCCcccccCCCcEEEecCC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLL--------V----PEPETDIIGGPEVFIENGS 155 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~g~ 155 (236)
+...|.|.+++.+|+|.|+|.|.|.... ....+.+. ...... . ....+.+..+....+.+|+
T Consensus 59 g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~ 132 (207)
T 3rbs_A 59 GIIEMFMEKLQDEDEGTYTFQLQDGKAT-NHSTVVLV-----GDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGEC 132 (207)
T ss_dssp CEEEEEESCCCGGGCEEEEEEEEETTEE-EEEEEEEC-----THHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTT
T ss_pred CEEEEEECCCChhhCEEEEEEEECCCeE-EEEEEEEE-----ccchhhhcccccccccccccCCCCceEecCCcEEcCCC
Confidence 4567999999999999999999993322 22222211 000000 0 0001111111135778999
Q ss_pred eEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 156 TINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 156 ~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
++.|.|.+.+. |. +.+.|++++..+.... ++.. .....+|.|.++..+|+|.|+|.|.|..|.
T Consensus 133 ~v~l~C~v~g~~P~--p~i~W~k~g~~l~~~~---~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 196 (207)
T 3rbs_A 133 NVLLKCKVANIKKE--THIVWYKDEREISVDE---KHDF-----KDGICTLLITEFSKKDAGIYEVILKDDRGK 196 (207)
T ss_dssp EEEEEEEEESCCTT--CEEEEEETTEEECCCC---CCCC-----SSEEEEEEETTCCGGGCEEEEEEEEETTEE
T ss_pred cEEEEEEEeCCCCC--CEEEEEECCEECCCCC---ceEc-----CCCEEEEEECCCCcccCEEEEEEEEcCCCE
Confidence 99999999987 54 4999999999885421 2111 113347999999999999999999999994
No 62
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.77 E-value=2.8e-20 Score=160.27 Aligned_cols=124 Identities=21% Similarity=0.345 Sum_probs=0.0
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCc-e--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQ-A--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~-~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
..|.|.+++.+|+|.|+|.|.|..+. . ....+.|.+ ..++.....+....+.+|+++.|.|.+.|.
T Consensus 625 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~-----------~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~ 693 (772)
T 3v2a_R 625 LIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLE-----------RVAPTITGNLENQTTSIGESIEVSCTASGN 693 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccc-----------cCCCEeecCCCceEEeCCCCEEEEEEeCcc
Confidence 35999999999999999999985422 2 334445431 112222233445678899999999999998
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
| .+.+.|++++..+... .++.+.... .+|.|.++..+|+|.|+|.|.|..| .++.|.|
T Consensus 694 P--~p~v~W~k~g~~l~~~---~~~~~~~~~-----~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 754 (772)
T 3v2a_R 694 P--PPQIMWFKDNETLVED---SGIVLKDGN-----RNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 754 (772)
T ss_dssp -----------------------------------------------------------------------
T ss_pred C--CCeEEEEECCeECcCC---CCeEEcCCC-----cEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEE
Confidence 4 4599999999887542 122222222 4799999999999999999999998 3444444
No 63
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.76 E-value=2.7e-17 Score=118.12 Aligned_cols=115 Identities=23% Similarity=0.316 Sum_probs=86.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
+..|.|.+++.+|+|.|+|.+.+..+. .....+.|.. ++.....+....+..|+.+.|.|.+.+.
T Consensus 61 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 127 (192)
T 2iep_A 61 GQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKM-------------KPKITRPPINVKIIEGLKAVLPCTTMGN 127 (192)
T ss_dssp GTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEE-------------EEEEEECCCCEEEETTSCEEECCEEEEE
T ss_pred ccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEe-------------CCccccCCcceEEeCCCcEEEEEEEecc
Confidence 347999999999999999999987654 3455666661 1112223446778899999999999998
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| .+.+.|++++..+... .+... ...+ .|.|.++..+|.|.|+|.|.|..|
T Consensus 128 p--~~~v~W~~~~~~~~~~---~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g 177 (192)
T 2iep_A 128 P--KPSVSWIKGDSALREN---SRIAV-LESG-----SLRIHNVQKEDAGQYRCVAKNSLG 177 (192)
T ss_dssp S--CCEEEEEETTEECCCC---SSEEE-CTTS-----CEEESSCCGGGCEEEEEEEEETTE
T ss_pred C--CceEEEEeCCEEccCC---CcEEE-ecCC-----cEEEecCChhhCEEEEEEEEcCCC
Confidence 4 4599999999877431 22322 2222 699999999999999999999998
No 64
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.76 E-value=1.1e-17 Score=118.81 Aligned_cols=150 Identities=17% Similarity=0.235 Sum_probs=104.4
Q ss_pred CCCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEE
Q psy10361 44 QHKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTV 123 (236)
Q Consensus 44 ~~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v 123 (236)
..++.-...|.+..... ...+.|.+++..... ....|.|.+++.+|+|.|+|.+.+... +..+.|.|
T Consensus 20 ~~G~~v~L~C~~~~~p~-------~~~~~W~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~~~-s~~~~l~V 86 (175)
T 1fnl_A 20 LEKDSVTLKCQGAYSPE-------DNSTQWFHNESLISS-----QASSYFIDAATVNDSGEYRCQTNLSTL-SDPVQLEV 86 (175)
T ss_dssp ETTCCEEEEEECCCBTT-------BCCCEEEETTEEEES-----SCSEEEESSCCGGGCEEEEEECSSSCC-CCCEEEEE
T ss_pred eCCCcEEEEeeCCCCCC-------CcceEEEECCEEccC-----CceEEEEeCCCcccCEEEEEEeeCCcc-cccEEEEE
Confidence 35677777887654221 112456666544322 456899999999999999999988543 44567777
Q ss_pred EEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEE
Q psy10361 124 VVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVS 203 (236)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (236)
. .+...+. .....+.+|+++.|.|.+.+.+ |++.+.|++++..+... ... .
T Consensus 87 ~-------------~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~-~~~~~~W~k~g~~~~~~---------~~~-----~ 137 (175)
T 1fnl_A 87 H-------------IGWLLLQ-APRWVFKEEDPIHLRCHSWKNT-ALHKVTYLQNGKDRKYF---------HHN-----S 137 (175)
T ss_dssp E-------------CSSEEEE-CSCSEEETTCCEEEEEEECTTC-CCEEEEEEETTEEEEEE---------EEC-----C
T ss_pred e-------------CCCceee-CCCceecCCCCEEEEEEcCCCC-CceEEEEEECCeEccCC---------CCC-----C
Confidence 6 2222222 2345678999999999998764 33599999999877431 111 2
Q ss_pred EEEEcccCCCCCeEEEEEeCCCCC----ceEEEEEc
Q psy10361 204 YLLIQKARPSDNGKYQCNPANSQA----KSVMVNVL 235 (236)
Q Consensus 204 ~L~i~~v~~~d~G~y~C~a~n~~g----~~~~~~v~ 235 (236)
.|.|.++..+|+|.|+|.|.|..| ..+.|.|.
T Consensus 138 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 138 DFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 699999999999999999999765 45566654
No 65
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.76 E-value=9.6e-19 Score=141.37 Aligned_cols=126 Identities=19% Similarity=0.240 Sum_probs=81.7
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCC------ceeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEecCCeEEEE
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPH------QAHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIENGSTINLT 160 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~ 160 (236)
....|.|.+++.+|+|.|+|.+.|..+ ......+.|. ..+...+.+ ..++...+..|+.+.|.
T Consensus 295 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~----------~~~~~~P~v~~~~~~~~~~~g~~v~L~ 364 (438)
T 1qgc_4 295 NTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVS----------AAKTTPPSVYPLAPGSAAAAASMVTLG 364 (438)
T ss_dssp TEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEEC----------SSCCBCCEEEEECCCGGGCCSSEEEEE
T ss_pred CeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEe----------cCCCCCCeEEEcCcccccccCCcEEEE
Confidence 356899999999999999999997321 2234566665 111111111 11212234579999999
Q ss_pred eEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 161 CVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 161 C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|.+.+. |.| ..+.|++++..+.... .... ...+.....+.|.|.++..+| |.|+|.|.|..|.
T Consensus 365 C~~~g~~P~~-~~v~W~~~g~~~~~~~-~~~~--~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~ 428 (438)
T 1qgc_4 365 CLVKGYFPEP-VTVTWNSGSLSSGVHT-FPAV--LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 428 (438)
T ss_dssp EEEESCBSSC-CEEEEGGGTCCSSEEE-CCCE--EETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGT
T ss_pred EEeccccCCC-cEEEEecCCCCCceee-cCcc--ccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCC
Confidence 999986 432 3899999987664321 1111 111112234579999988888 9999999999984
No 66
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.76 E-value=5.8e-18 Score=133.72 Aligned_cols=104 Identities=16% Similarity=0.123 Sum_probs=78.8
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecC--CCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTT--PHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~--~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
...|.|.+++.+|+|.|+|.|.|. .+.. ..+.|.|.. + .|+++.|.|.+.+
T Consensus 254 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-----------------v---------~g~~~~l~C~~~g 307 (363)
T 1wio_A 254 PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-----------------A---------TQLQKNLTCEVWG 307 (363)
T ss_dssp SCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE-----------------E---------CCCSSSEEEEEES
T ss_pred ceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE-----------------e---------cCCCeeEEEEEcc
Confidence 448999999999999999999998 6543 555666651 0 1788999999999
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC--ceEEEEEc
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA--KSVMVNVL 235 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g--~~~~~~v~ 235 (236)
.|.|...+.|++++..+... ..|.|.++..+|+|.|+|.|.|... .+..+.|+
T Consensus 308 ~p~p~~~i~W~~~~~~~~~~-----------------~~l~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~V~ 362 (363)
T 1wio_A 308 PTSPKLMLSLKLENKEAKVS-----------------KREKAVWVLNPEAGMWQCLLSDSGQVLLESNIKVL 362 (363)
T ss_dssp SCCTTCCEEEECSSSSCSEE-----------------ESSSEEEESSCCSEEEEEEECSSSSCCEEEEEEEC
T ss_pred ccCCCccEEEEeCCCceeee-----------------eeeeeeeeccccceeEEEEEecCCeEEEecceEec
Confidence 86553349999998765321 1467789999999999999998765 44555554
No 67
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.76 E-value=1.4e-17 Score=133.03 Aligned_cols=122 Identities=16% Similarity=0.224 Sum_probs=83.3
Q ss_pred cEEEEEcCCCCCC-CEEEEEEeecCCCce----eEEEEEEEEEEeeCCcccccCCCcccccC---CCcEEEecCCeEEEE
Q psy10361 89 DWTLQLKYPQHKD-TGIYECQVSTTPHQA----HYIYLTVVVLVINDGKYLLVPEPETDIIG---GPEVFIENGSTINLT 160 (236)
Q Consensus 89 ~~~L~i~~~~~~d-~G~Y~C~~~~~~~~~----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~ 160 (236)
++.|.|.+++.+| .|.|+|.+.+..+.. ..+.+.+. ..+... ..++..+.. .....+..|+++.|.
T Consensus 170 ~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~-----~~~~~~-~~~p~~~~~~~~~~~~~~~~G~~v~l~ 243 (404)
T 3p3y_A 170 NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVL-----TTRGVA-ERTPSFMYPQGTASSQMVLRGMDLLLE 243 (404)
T ss_dssp TSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEE-----CCSCCC-CCCCCBSSSCSSEEEEEEETTSCEEEE
T ss_pred CCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEe-----ccCCcc-ccCCccccccCCCCCceEecCCCEEEE
Confidence 4579999999999 599999999875432 23445554 000000 001111111 124568899999999
Q ss_pred eEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 161 CVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 161 C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.| .+.+.|++++..+.. .......... .|.|.++..+|+|.|+|.|.|..|
T Consensus 244 C~~~g~p--~~~v~W~~~~~~~~~----~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g 299 (404)
T 3p3y_A 244 CIASGVP--TPDIAWYKKGGDLPS----DKAKFENFNK-----ALRITNVSEEDSGEYFCLASNKMG 299 (404)
T ss_dssp CCBCCSS--CCEEEEEETTBCCCT----TTEEEEGGGT-----EEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEECCCC--CCcEEEEECCEECCC----CcccccccCc-----eEEEccCCHhHCEEEEEEEEeCCC
Confidence 9999884 459999999987642 1222222232 799999999999999999999998
No 68
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.76 E-value=2.6e-18 Score=134.82 Aligned_cols=208 Identities=13% Similarity=0.131 Sum_probs=113.3
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEE---ecc--------------eeEEe-----------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFV---RHR--------------DIHLL----------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~---~~~--------------~~~~~----------------- 66 (236)
...|+.+.......+.+|+|.+++.+|+|.|.|.+.+. ... .....
T Consensus 64 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~ 143 (344)
T 1za6_B 64 FKGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL 143 (344)
T ss_dssp TBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEE
T ss_pred cCCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEE
Confidence 35788887654556789999999999999999998641 000 00000
Q ss_pred -----cc-eeeEEecCCcE---E----EEcCCC--CCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEE-----
Q psy10361 67 -----TT-GRYTYTNDQRF---R----VINNPT--SDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVV----- 125 (236)
Q Consensus 67 -----~~-~~~~~~~~~~~---~----~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~----- 125 (236)
+. ..+.|.+++.. . ...... .....|.|..++.+| |.|+|.+.+..+.. ....+.+.+
T Consensus 144 ~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~ 222 (344)
T 1za6_B 144 VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTH 222 (344)
T ss_dssp EEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC----
T ss_pred EeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeeccccccccc
Confidence 11 24566655532 0 000000 012368899998888 99999999876532 111221000
Q ss_pred -------EEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecC
Q psy10361 126 -------LVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG 198 (236)
Q Consensus 126 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 198 (236)
...-........++...+..+... ...|+.+.|.|.+.|.+.|.+.+.|++++..+.... ..... ...++
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~-~~~~~-~~~~g 299 (344)
T 1za6_B 223 TCPPCGGGSSGGGSGGQPREPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK-TTPPV-LDSDG 299 (344)
T ss_dssp ----------------CCBCCEEEEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEE-ECCCE-ECTTS
T ss_pred ccCCCCCCccccccCCCCcCCEEEEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcE-ecceE-ECCCC
Confidence 000000000000111111111111 124667999999998532346899999997764211 01111 11222
Q ss_pred -cceEEEEEEcccCCCCCeEEEEEeCCCCC-ceEEE
Q psy10361 199 -ETTVSYLLIQKARPSDNGKYQCNPANSQA-KSVMV 232 (236)
Q Consensus 199 -~~~~~~L~i~~v~~~d~G~y~C~a~n~~g-~~~~~ 232 (236)
....+.|.|.....+|.|.|+|.|.|... ..+.+
T Consensus 300 ~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~~~~~~ 335 (344)
T 1za6_B 300 SFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQ 335 (344)
T ss_dssp CEEEEEEEEECHHHHHTTCEEEEEEECTTSTTSEEE
T ss_pred cEEEEEEEEEChHHccCCCeEEEEEEcCCCCCCeeE
Confidence 22345677777777789999999999864 44443
No 69
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.76 E-value=2.1e-16 Score=113.42 Aligned_cols=121 Identities=22% Similarity=0.357 Sum_probs=86.2
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|.. + +.+.......+..|+.+.|.|.+.+.
T Consensus 57 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~-------------~-p~~~~~~~~~~~~g~~v~l~C~~~~~- 121 (192)
T 2va4_A 57 NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV-------------Q-PHIIQLKNETTYENGQVTLVCDAEGE- 121 (192)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-------------E-EEEEEECCEEECTTSEEEEEEEEEEE-
T ss_pred eeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEc-------------c-CcccccCcceEEeCCeEEEEEEecCC-
Confidence 4579999999999999999999876543 556666661 1 12222234566789999999999998
Q ss_pred CCCCeEEEeec--CeEEeee--cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 168 EPPAYIFWNHN--EAIISYD--SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 168 ~p~~~v~W~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|.+.+.|+++ +..+... ...++....... ....|.|.++..+|.|.|+|.|.|..|.
T Consensus 122 -p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 182 (192)
T 2va4_A 122 -PIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH---GSSSLHIKDVKLSDSGRYDCEAASRIGG 182 (192)
T ss_dssp -SCCEEEEEETTTTEEECTTCBCTTSCEEEEEET---TEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred -CCCcEEEEeCCCCceeeccccccCCcEEEeecc---CceEEEEecCCcccCEEEEEEEEecCCc
Confidence 4458999998 4444321 112233322222 2358999999999999999999999983
No 70
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.75 E-value=2.5e-17 Score=120.65 Aligned_cols=134 Identities=15% Similarity=0.141 Sum_probs=86.1
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
..|.|.+++.+|+|.|+|.|.+..... ..+.|.|. ..+.+...+..+..+.+.+|+++.|.|.+.+.|
T Consensus 64 ~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~----------~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p 133 (213)
T 2x1w_L 64 KGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVV----------GYRIYDVVLSPSHGIELSVGEKLVLNCTARTEL 133 (213)
T ss_dssp TEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEEC----------BCCEEEEEEESCSCEEEETTCCEEEEEEEEECT
T ss_pred ccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEe----------CCcccceEEcCCCCeEEcCCCCEEEEEEEECCC
Confidence 469999999999999999998754322 22455554 000111122233455889999999999999876
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEee-c---CcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITE-K---GETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
.+++.+.|++++..+..... ....... . .....++|.|.++..+|+|.|+|.|.|..| .++.|.|.
T Consensus 134 ~~~~~i~W~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 134 NVGIDFNWEYPSSKHQHKKL--VNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp TBCCEEEEECSCSSCCSEEE--EEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCceEEEEEecCCccceEEE--eccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEe
Confidence 55568999998865321000 0000000 0 012345799999999999999999999998 44556654
No 71
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.75 E-value=7.6e-17 Score=131.83 Aligned_cols=204 Identities=15% Similarity=0.109 Sum_probs=113.3
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEec---------ce--eEEe------------------------
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRH---------RD--IHLL------------------------ 66 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~---------~~--~~~~------------------------ 66 (236)
..||.+.......+++|.|.+++.+|+|.|.|.+.+..+ .. ..+.
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~ 145 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVV 145 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEE
Confidence 578888765445678999999999999999999875321 00 0000
Q ss_pred ---------cc-e-eeEEecCCcEE-EEcCC-----CCC----cEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEE--E
Q psy10361 67 ---------TT-G-RYTYTNDQRFR-VINNP-----TSD----DWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLT--V 123 (236)
Q Consensus 67 ---------~~-~-~~~~~~~~~~~-~~~~~-----~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~--v 123 (236)
+. . .+.|.+++... ..... ..+ ...|.|..++.+|.|.|+|.+.+..+......+. |
T Consensus 146 L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V 225 (475)
T 1iga_A 146 IACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPV 225 (475)
T ss_pred EEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEeccc
Confidence 11 1 44554443210 00000 001 1357888888899999999999876533222332 2
Q ss_pred EEEEe--e-C---CcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC-CCCeEEEeecCeEEeeecCCCceEEEee
Q psy10361 124 VVLVI--N-D---GKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE-PPAYIFWNHNEAIISYDSQRGGVNVITE 196 (236)
Q Consensus 124 ~~~~~--~-~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 196 (236)
..... + . ........+...+..+....+.+|+++.|.|.+.+.+. +++.+.| .+ ..+.... .........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~-~~~~~~~-~~~~~~~~~ 302 (475)
T 1iga_A 226 PSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAV-QGPPERDLC 302 (475)
T ss_pred ccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CC-CCcCCcc-ccCceECCC
Confidence 10000 0 0 00000001111122222223578999999999987631 1258999 43 3332111 011111001
Q ss_pred cCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 197 KGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 197 ~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
......+.|.|.++..+|+|.|+|.|.|..|.
T Consensus 303 g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~ 334 (475)
T 1iga_A 303 GCYSVSSVLPGCAEPWNHGKTFTCTAAYPESK 334 (475)
T ss_pred CCEEEEEEEEEchHHhccCCcEEEEEEcCCCC
Confidence 11124457999999999999999999999874
No 72
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.75 E-value=3.2e-17 Score=117.38 Aligned_cols=123 Identities=24% Similarity=0.383 Sum_probs=86.5
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce---eEEEEEEEEEEeeCCcccccCCCcccccCCC--cEEEecCCeEEEEeEE
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA---HYIYLTVVVLVINDGKYLLVPEPETDIIGGP--EVFIENGSTINLTCVV 163 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~l~C~~ 163 (236)
+..|.|.+++.+|+|.|+|.+.+..... ..+.+.+.. + +. ...... ...+..|+.+.|.|.+
T Consensus 56 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~-----------~-p~-~~~~~~~~~~~~~~g~~v~l~C~~ 122 (189)
T 2v5t_A 56 NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV-----------P-PA-ISMPQKSFNATAERGEEMTFSCRA 122 (189)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEE-----------E-EE-EECSCCEEEEETTSCCCEEEECEE
T ss_pred CCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecC-----------C-CC-cccccccccccccCCCcEEEEEEE
Confidence 3469999999999999999998875322 344455541 1 11 111111 3456689999999999
Q ss_pred eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 164 RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 164 ~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
.+. |.+.+.|++++..+.. ..+........ .|.|.++..+|.|.|+|.|.|..| .++.|.|
T Consensus 123 ~g~--p~~~v~W~~~g~~~~~---~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 123 SGS--PEPAISWFRNGKLIEE---NEKYILKGSNT-----ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp EEE--SCCEEEEEETTEECCC---SSSEEEETTTT-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccC--CCCeEEEEECCEECcC---CCcEEEecCCC-----EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 988 4459999999988743 22333333332 799999999999999999999998 3344444
No 73
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.74 E-value=7.9e-17 Score=128.11 Aligned_cols=177 Identities=18% Similarity=0.211 Sum_probs=109.3
Q ss_pred ceEEEEcCCCCCC------CeeEEEEEEEEecc----eeEE------------------------e----------ccee
Q psy10361 35 DWTLQLKYPQHKD------TGIYECQVSFVRHR----DIHL------------------------L----------TTGR 70 (236)
Q Consensus 35 ~~~L~i~~~~~~D------~G~Y~C~v~~~~~~----~~~~------------------------~----------~~~~ 70 (236)
+.+|.|.+++.+| +|.|.|.+.+..+. ...+ + +...
T Consensus 58 ~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~ 137 (388)
T 2v5m_A 58 DGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEV 137 (388)
T ss_dssp TTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEE
T ss_pred CceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcce
Confidence 4589999999998 99999998864321 1100 0 0134
Q ss_pred eEEecCCcEEEEcCC-------CCCcEEEEEcCCCCCCC-EEEEEEeecCCCce-----eEEEEEEEEEEeeCCcccccC
Q psy10361 71 YTYTNDQRFRVINNP-------TSDDWTLQLKYPQHKDT-GIYECQVSTTPHQA-----HYIYLTVVVLVINDGKYLLVP 137 (236)
Q Consensus 71 ~~~~~~~~~~~~~~~-------~~~~~~L~i~~~~~~d~-G~Y~C~~~~~~~~~-----~~~~l~v~~~~~~~~~~~~~~ 137 (236)
+.|.+++........ ......|.|.+++.+|+ |.|+|.+.+..... ....+.|.. ......|
T Consensus 138 v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~-----~~~~~~p 212 (388)
T 2v5m_A 138 VSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE-----PISSSAP 212 (388)
T ss_dssp EEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEEC-----CCSCEEE
T ss_pred EEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEec-----CCcCCCC
Confidence 566655433221100 01245799999999999 99999998864322 112455540 0000000
Q ss_pred CCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee---cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 138 EPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD---SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 138 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
..+.+ ......+.+|+++.|.|.+.+.| .+.+.|++++..+... ....+.. ...+ .|.|.++..+|
T Consensus 213 -~~~~~-~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~~~~~~~~~~~~~~~~~~--~~~~-----~L~i~~v~~~d 281 (388)
T 2v5m_A 213 -RTPAL-VQKPLELMVAHTISLLCPAQGFP--APSFRWYKFIEGTTRKQAVVLNDRVK--QVSG-----TLIIKDAVVED 281 (388)
T ss_dssp -ECCSS-CCCCEEEETTSCEEECCCCEEES--CCEEEEEEECTTSSCEEECCCSSSEE--EETT-----EEEESSCCGGG
T ss_pred -cCccc-cCCceEEeeCCcEEEEEECCCCC--CCEEEEEecCCCCcccccccccCcee--cccC-----EEEECcCCHHH
Confidence 00111 12345678899999999999984 4599999975322110 1111221 1222 79999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
.|.|+|.|.|..|
T Consensus 282 ~G~Y~C~a~n~~g 294 (388)
T 2v5m_A 282 SGKYLCVVNNSVG 294 (388)
T ss_dssp CEEEEEEEECSSC
T ss_pred CeEEEEEEecCCC
Confidence 9999999999998
No 74
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.73 E-value=3.3e-17 Score=119.25 Aligned_cols=149 Identities=17% Similarity=0.252 Sum_probs=102.1
Q ss_pred CCCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEE
Q psy10361 44 QHKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTV 123 (236)
Q Consensus 44 ~~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v 123 (236)
..++.-...|.+..... ...+.|.+++..... ....|.|.+++.+|+|.|+|.+.+.. .+..+.|.|
T Consensus 20 ~~G~~v~L~C~~~~~p~-------~~~v~W~k~g~~l~~-----~~~~L~i~~v~~~D~G~Y~C~a~n~~-~s~~~~l~V 86 (204)
T 3sgj_C 20 LEKDSVTLKCQGAYSPE-------DQSTQWFHNESLISS-----QASSYFIDAATVDDSGEYRCQTQLST-LSDPVQLEV 86 (204)
T ss_dssp ETTCCEEEEEECCSSSS-------CCCEEEEETTEEESC-----CSSEEEESSCCGGGCEEEEEEETTSB-CCCCEEEEE
T ss_pred ECCCCEEEEEcCCCCCC-------CcEEEEEECCEEccc-----CccEEEEecccccCCEEEEEEeCCCc-ccccEEEEE
Confidence 45677777787653211 112566666543321 23689999999999999999998743 344567777
Q ss_pred EEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEE
Q psy10361 124 VVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVS 203 (236)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (236)
. ... .+...+...+.+|+++.|.|.+.+.+ |.+.+.|++++..+.... .. .
T Consensus 87 ~-------------~~p-~~~~~~~~~v~~G~~v~L~C~~~~~~-p~~~v~W~k~g~~~~~~~---------~~-----~ 137 (204)
T 3sgj_C 87 H-------------IGW-LLLQAPRWVFKEEDPIHLRCHSWKNT-ALHKVTYLQNGKGRKYFH---------HN-----S 137 (204)
T ss_dssp E-------------CSS-EEEECSCSEEETTCCEEEEEEEGGGC-CCEEEEEEETTEEEEEEE---------EC-----C
T ss_pred e-------------cCc-eEecCCceeEeCCCcEEEEEEecCCC-CCceEEEEECCcEeeccc---------CC-----c
Confidence 7 222 22223336778999999999996653 446899999998764311 12 2
Q ss_pred EEEEcccCCCCCeEEEEEeCCCCC----ceEEEEE
Q psy10361 204 YLLIQKARPSDNGKYQCNPANSQA----KSVMVNV 234 (236)
Q Consensus 204 ~L~i~~v~~~d~G~y~C~a~n~~g----~~~~~~v 234 (236)
.|.|.++..+|+|.|+|.|.|..+ ..+.|.|
T Consensus 138 ~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V 172 (204)
T 3sgj_C 138 DFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITI 172 (204)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEECcCCcccCEEEEEEEEeCCCceecCcEEEEE
Confidence 699999999999999999999543 3445554
No 75
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.73 E-value=7.5e-17 Score=118.44 Aligned_cols=156 Identities=20% Similarity=0.239 Sum_probs=105.0
Q ss_pred CCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEE
Q psy10361 45 HKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLT 122 (236)
Q Consensus 45 ~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~ 122 (236)
.++.-...|.+... +...+.|.+++.... ......|.|.+++.+|+|.|+|.+.+..+. +..+.|.
T Consensus 32 ~G~~v~L~C~~~~~--------p~~~v~W~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~ 99 (218)
T 3k0w_A 32 AGQFVKLCCRATGH--------PFVQYQWFKMNKEIP----NGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLD 99 (218)
T ss_dssp TTSBEEEECEETTT--------TSSEEEEEETTEECT----TCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEE
T ss_pred CCCcEEEEeeecCC--------CCCEEEEEECCEECC----CCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEE
Confidence 46677777876321 122455655543221 124568999999999999999999987653 3456777
Q ss_pred EEEEEeeCCcccc------cCCC-cccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEe
Q psy10361 123 VVVLVINDGKYLL------VPEP-ETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVIT 195 (236)
Q Consensus 123 v~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 195 (236)
|.. .+... .+.. ......+....+..|+.+.|.|.+.+. |.+.+.|++++..+....
T Consensus 100 V~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~--p~~~v~W~~~~~~~~~~~--------- 163 (218)
T 3k0w_A 100 VCD-----IPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGS--PIPHYQWFKNELPLTHET--------- 163 (218)
T ss_dssp EEC-----CCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBS--SCCEEEEEETTEECTTCC---------
T ss_pred EEc-----cCcccccccccccCCCceEEECCCceeecCCCcEEEEEEeccc--CCCeEEEEECCEECCCCC---------
Confidence 761 11000 0001 122233456778899999999999988 445999999998774311
Q ss_pred ecCcceEEEEEEcccCCCCCeEEEEEeCCCCC----ceEEEEE
Q psy10361 196 EKGETTVSYLLIQKARPSDNGKYQCNPANSQA----KSVMVNV 234 (236)
Q Consensus 196 ~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g----~~~~~~v 234 (236)
. ..|.|.++..+|.|.|+|.|.|..| ..+.|.|
T Consensus 164 -~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 200 (218)
T 3k0w_A 164 -K-----KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 200 (218)
T ss_dssp -S-----SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred -C-----CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEE
Confidence 1 2799999999999999999999887 3445554
No 76
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.73 E-value=6.3e-17 Score=117.71 Aligned_cols=116 Identities=19% Similarity=0.312 Sum_probs=86.1
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
+..|.|.+++.+|+|.|+|.+.+.... ...+.|.|. .+...+.+...... +..|+.+.|.|.+.+.
T Consensus 70 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~p~i~~~~~~-~~~g~~v~l~C~~~~~ 137 (208)
T 3r4d_A 70 NGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVH-----------QPVTQPFLQVTNTT-VKELDSVTLTCLSNDI 137 (208)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE-----------CCCCCCEEEESCSS-CCTTCCEEEEEECSCT
T ss_pred CCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEec-----------cCCCCCEEecCCce-EeeCCCEEEEEECCCC
Confidence 447999999999999999999987532 355666666 22222333322222 7889999999999886
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| +.+.|++++..+.. ..+........ +|.|.++..+|.|.|+|.|.|..|
T Consensus 138 --p-p~i~W~~~g~~l~~---~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~g 187 (208)
T 3r4d_A 138 --G-ANIQWLFNSQSLQL---TERMTLSQNNS-----ILRIDPIKREDAGEYQCEISNPVS 187 (208)
T ss_dssp --T-CEEEEEETTEECCC---CSSEEEETTTT-----EEEESSCCGGGCEEEEEEEECTTC
T ss_pred --C-CceEEEECCEeCCC---CCCeEEcCCCC-----EEEEeccCHHhCeEEEEEEecCCC
Confidence 3 49999999988743 22344333333 799999999999999999999998
No 77
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.73 E-value=5.5e-18 Score=127.34 Aligned_cols=128 Identities=13% Similarity=0.177 Sum_probs=80.7
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEecCCeEEEEeEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~ 164 (236)
....|.|.+++.+|+|.|+|.+.+..... ....+.|. .+...+.+. .+.......|+.+.|.|.+.
T Consensus 111 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~-----------~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 179 (254)
T 2c1o_A 111 TDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK-----------RADAAPTVSIFPPSSEQLTSGGASVVCFLN 179 (254)
T ss_dssp TEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC-----------CCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred CEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC-----------CCCCCCeeEeecCChhhccCCcEEEEEEEe
Confidence 34589999999999999999998865422 23355554 111111111 11111123578999999998
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEE-eecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVI-TEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+.+.+.+.+.|++++..+.... ....... ..++ ....+.|.|.++..+|+|.|+|.|.|...
T Consensus 180 g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 180 NFYPKDINVKWKIDGSERQNGV-LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 243 (254)
T ss_dssp EEBSSCCEEEEEESSSEECTTE-EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred cccCCCcEEEEEECCCcccCcc-eeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCC
Confidence 8532335799999998774310 0000000 0111 12346899999999999999999999975
No 78
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.73 E-value=5.2e-16 Score=111.80 Aligned_cols=118 Identities=15% Similarity=0.247 Sum_probs=87.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .++.....+....+.+|+.+.|.|.+.+.
T Consensus 67 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~-------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 133 (195)
T 2c5d_C 67 VSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLE-------------GLPYFLEEPEDRTVAANTPFNLSCQAQGP 133 (195)
T ss_dssp EEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-------------CSCEEEECCCCEEECTTCCEEEEEEEECS
T ss_pred ccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEe-------------cCCeEEcCCCcEEEcCCCEEEEEeECCCC
Confidence 4689999999999999999999876433 34667776 22223334556788899999999999998
Q ss_pred CCCCC-eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc----eEEEEE
Q psy10361 167 PEPPA-YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK----SVMVNV 234 (236)
Q Consensus 167 p~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~----~~~~~v 234 (236)
|.+ .+.|++++..+..... . .....|.|.++. |+|.|+|.|.|..|. .+.|.|
T Consensus 134 --p~p~~v~W~~~~~~~~~~~~---~--------~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 134 --PEPVDLLWLQDAVPLATAPG---H--------GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp --SCCCEEEEEESSCBSSSSTT---S--------SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCCEEEEEECCEeccCCCC---c--------CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 556 8999999987743211 1 122479999887 789999999999983 445554
No 79
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.73 E-value=2.2e-16 Score=112.19 Aligned_cols=153 Identities=14% Similarity=0.142 Sum_probs=97.6
Q ss_pred CCceEEEEcCCCCCCCeeEEEEEEEEecceeEEec-ceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeec
Q psy10361 33 SDDWTLQLKYPQHKDTGIYECQVSFVRHRDIHLLT-TGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVST 111 (236)
Q Consensus 33 ~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 111 (236)
+.++.|.+......+. .-.+.|.+........ .+.......+|+.+. .+++|.|.+++.+|+|.|+|.+.+
T Consensus 11 G~~v~L~c~~~~~~~~---~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~-----~~gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 11 GHGINLNIPNFQMTDD---IDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL-----ANGDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp TSCEEECCTTCCCCTT---EEEEEEEETTEEEEEEETTSCCEESSTTEEEC-----TTSCEEESSCCGGGCEEEEEEEEE
T ss_pred CCcEEEcCCCCCcccc---cccEEEEeCCceeEEEcCCCeecCCCCeEEEC-----CCCcEEEcccccccCEEEEEEEEe
Confidence 4566777643332222 2368888765422110 111122234566653 234599999999999999999998
Q ss_pred CCCc---eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCC
Q psy10361 112 TPHQ---AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQR 188 (236)
Q Consensus 112 ~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~ 188 (236)
..+. ...+.|.|. .+...+. ....+.++.|.|.+.+.| .+.+.|++++..+....
T Consensus 83 ~~g~~~~~~~~~l~V~-----------~~~~~p~-------i~~~~~~v~L~C~~~g~p--~p~i~W~~~g~~l~~~~-- 140 (176)
T 1hng_A 83 TNGTRILNKALDLRIL-----------EMVSKPM-------IYWECSNATLTCEVLEGT--DVELKLYQGKEHLRSLR-- 140 (176)
T ss_dssp TTCCEEEEEEEEEEEE-----------CCCCCCE-------EEEETTTTEEEEECSSCS--SCEEEEEETTEEEEEES--
T ss_pred CCCCEEEEEEEEEEEe-----------CCCCCCE-------EEecCCcEEEEEEecCCC--CcEEEEEECCEECCCCC--
Confidence 7654 345666666 1111111 122355699999999884 46999999998875421
Q ss_pred CceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceE
Q psy10361 189 GGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSV 230 (236)
Q Consensus 189 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~ 230 (236)
.+.|..+..+|.|.|+|.|.|.+|...
T Consensus 141 ---------------~~~i~~~~~~d~G~Y~C~a~N~~g~~~ 167 (176)
T 1hng_A 141 ---------------QKTMSYQWTNLRAPFKCKAVNRVSQES 167 (176)
T ss_dssp ---------------SSEEEEECSCCSSCEEEEEEETTEEEE
T ss_pred ---------------cEEEEEEEccCCeEEEEEEEecCCCce
Confidence 133446779999999999999998543
No 80
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.72 E-value=3.3e-16 Score=111.52 Aligned_cols=116 Identities=20% Similarity=0.283 Sum_probs=87.4
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
...|.|.+++.+|+|.|+|.+.+..+. +..+.|.|. .++.....+....+..|+.+.|.|.+.+.
T Consensus 59 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~-------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 125 (182)
T 1rhf_A 59 IGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE-------------GVPFFTVEPKDLAVPPNAPFQLSCEAVGP 125 (182)
T ss_dssp EEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEE-------------CSCEEEECCCCEEECTTCCEEEEEEEECS
T ss_pred eEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEe-------------cCCeEEecCcceEecCCCEEEEEeEecCC
Confidence 468999999999999999999987543 356777777 22223334556788899999999999988
Q ss_pred CCCCC-eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc----eEEEEE
Q psy10361 167 PEPPA-YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK----SVMVNV 234 (236)
Q Consensus 167 p~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~----~~~~~v 234 (236)
|.+ .+.|++++..+.... . ....|.|.++ +|+|.|+|.|.|..|. ++.|.|
T Consensus 126 --p~p~~v~W~~~~~~~~~~~---~----------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 126 --PEPVTIVWWRGTTKIGGPA---P----------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp --SSCCEEEEEETTEECSCSE---E----------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCCEEEEEcCCeECCCCC---C----------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 445 899999998773211 0 1147889888 5899999999999983 445554
No 81
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.72 E-value=6.8e-16 Score=122.73 Aligned_cols=122 Identities=21% Similarity=0.422 Sum_probs=91.2
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
....|.|.+++.+|+|.|+|.|.|..+.. ..+.|.|.. ++.....+....+..|+.+.|.|.+.+.
T Consensus 61 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-------------~P~~~~~~~~~~~~~g~~~~l~C~~~g~ 127 (389)
T 2jll_A 61 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEY-------------APKFISNQTIYYSWEGNPINISCDVKSN 127 (389)
T ss_dssp SEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEE-------------EEEECCSCCEEEECTTCCEEEEECEEEE
T ss_pred CcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEe-------------CCEEecCcceEEeccCCEEEEEEEEEec
Confidence 46789999999999999999999977644 667777771 1112222233467899999999999998
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
| .+.+.|++++..+.... ..++...... ....|.|.++..+|.|.|+|.|.|..|.
T Consensus 128 p--~~~i~W~~~g~~l~~~~-~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 183 (389)
T 2jll_A 128 P--PASIHWRRDKLVLPAKN-TTNLKTYSTG---RKMILEIAPTSDNDFGRYNCTATNHIGT 183 (389)
T ss_dssp S--CCEEEEEETTEESSCTT-CTTEEEEECS---SCEEEEECCCSTTSSEEEEEEEEETTEE
T ss_pred C--CCeEEEEECCccCCccc-CceEEEeccC---CEEEEEECCCChhhCEEEEEEEEcCCCc
Confidence 4 46999999998875422 1233333222 2357999999999999999999999983
No 82
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.72 E-value=7.7e-17 Score=127.95 Aligned_cols=172 Identities=18% Similarity=0.320 Sum_probs=107.6
Q ss_pred eEEEEcCCCC-CCCeeEEEEEEEEecce------eE----------------Ee---------------cceeeEEecCC
Q psy10361 36 WTLQLKYPQH-KDTGIYECQVSFVRHRD------IH----------------LL---------------TTGRYTYTNDQ 77 (236)
Q Consensus 36 ~~L~i~~~~~-~D~G~Y~C~v~~~~~~~------~~----------------~~---------------~~~~~~~~~~~ 77 (236)
.+|.|.++.. +|+|.|.|.+.+..+.. .. +. +...+.|.+++
T Consensus 61 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~ 140 (382)
T 1cs6_A 61 GDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNE 140 (382)
T ss_dssp TEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESS
T ss_pred CeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECC
Confidence 3899999997 99999999988632110 00 00 11234554433
Q ss_pred cEEEEcC-----CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce------eEEEEEEEEEEeeCCcccccCCCcccccCC
Q psy10361 78 RFRVINN-----PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA------HYIYLTVVVLVINDGKYLLVPEPETDIIGG 146 (236)
Q Consensus 78 ~~~~~~~-----~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~------~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
....... .......|.|.+++.+|+|.|+|.+.+..+.. ....+.+.. ...... .+......+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~----~~~~~~--~P~~~~~~~ 214 (382)
T 1cs6_A 141 FPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAA----EDARQY--APSIKAKFP 214 (382)
T ss_dssp TTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES----CCCCCE--EEEEEECCC
T ss_pred CccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccch----hhcccC--CCceeccCC
Confidence 2110000 01123579999999999999999998765321 223444430 000000 011111224
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
....+..|+.+.|.|.+.+.| .+.+.|++++..+.. . . .... ..|.|.++..+|.|.|+|.|.|..
T Consensus 215 ~~~~~~~G~~v~l~C~~~g~p--~~~i~W~~~~~~~~~---~--~--~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~ 280 (382)
T 1cs6_A 215 ADTYALTGQMVTLECFAFGNP--VPQIKWRKLDGSQTS---K--W--LSSE-----PLLHIQNVDFEDEGTYECEAENIK 280 (382)
T ss_dssp SEEEEETTCCEEEECEEEEES--CCEEEEEECCSCCSC---C--C--SBSS-----SEEEECSCCGGGCEEEEEEEEETT
T ss_pred CceEEeCCCeEEEEEEEccCC--CCEEEEEECCccccc---E--E--ecCC-----cEEEEccCChhhCEEEEEEEEcCC
Confidence 467788999999999999984 459999998765421 0 0 0112 379999999999999999999999
Q ss_pred C
Q psy10361 227 A 227 (236)
Q Consensus 227 g 227 (236)
|
T Consensus 281 g 281 (382)
T 1cs6_A 281 G 281 (382)
T ss_dssp E
T ss_pred C
Confidence 8
No 83
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.72 E-value=3.3e-17 Score=119.49 Aligned_cols=117 Identities=21% Similarity=0.288 Sum_probs=81.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-ee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-RF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~ 165 (236)
...+|.|.+++.+|+|.|+|.+.+..+. ...+.|.|. .++..+.. .....+..|+.+.|.|.+ .+
T Consensus 82 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~-----------~~p~~~~~--~~~~~~~~g~~v~l~C~~~~g 148 (214)
T 3jz7_A 82 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVL-----------VKPSGTRC--FVDGSEEIGNDFKLKCEPKEG 148 (214)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-----------CCCBSCEE--EEESCCBTTCCEEEEEECSBC
T ss_pred CcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEE-----------cCCCCcee--eeecceecCCcEEEEecCCCC
Confidence 4578999999999999999999987653 466777777 22111111 112236789999999999 77
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. |.+.+.|++++....... ........ ..|.|.++..+|.|.|+|.|.|..|
T Consensus 149 ~--p~~~v~W~~~~~~~~~~~---~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~a~N~~g 200 (214)
T 3jz7_A 149 S--LPLQFEWQKLSDSQTMPT---PWLAEMTS-----PVISVKNASSEYSGTYSCTVQNRVG 200 (214)
T ss_dssp C--SSCEEEEEECSTTCCCCG---GGGGGTTS-----SEEEECSCCGGGCEEEEEEEECSSC
T ss_pred C--CCCEEEEEECCCCCccCc---cceeccCC-----CEEEEecCCHHHCEEEEEEEEcCCC
Confidence 7 446999999543221100 00000112 2799999999999999999999998
No 84
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.72 E-value=1.7e-16 Score=115.59 Aligned_cols=120 Identities=24% Similarity=0.401 Sum_probs=84.5
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeE-Eee
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCV-VRF 165 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~-~~~ 165 (236)
..|.|.+++.+|+|.|+|.+.+..+ ....+.|.|. .++..+.+ +....+..|+++.|.|. +.+
T Consensus 65 ~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~-----------~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~ 131 (212)
T 1f97_A 65 SGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVL-----------VPPSKPTI--SVPSSVTIGNRAVLTCSEHDG 131 (212)
T ss_dssp TEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEE-----------BCCCCCEE--ECCSEEETTSCEEEEEECSCC
T ss_pred eeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEE-----------cCCCCccc--CCccccCCCCeEEEEEEcccC
Confidence 5799999999999999999998654 2356667776 22222222 22346788999999999 677
Q ss_pred CCCCCCeEEEeecCe-EEeeecCC------CceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCce
Q psy10361 166 SPEPPAYIFWNHNEA-IISYDSQR------GGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKS 229 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~ 229 (236)
. |.+.+.|++++. .+...... .+....... ..|.|.++..+|.|.|+|.|.|..|..
T Consensus 132 ~--p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 132 S--PPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKS-----GDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp B--SCCEEEEEETTEESBC-----CBSCSSSCEEECTTT-----CCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred c--CCCEEEEEeCCcccccccccccccccCceeEecCCC-----ceEEEEecChhhCcEEEEEEccccCCc
Confidence 7 445999999998 76432211 111211112 379999999999999999999999843
No 85
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.71 E-value=4.8e-17 Score=121.66 Aligned_cols=123 Identities=22% Similarity=0.286 Sum_probs=85.0
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc------eeEEEEEEEEEEeeCCcccccC-CCcccccCCCcEEEecCCeEEEEe
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ------AHYIYLTVVVLVINDGKYLLVP-EPETDIIGGPEVFIENGSTINLTC 161 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~l~C 161 (236)
...|.|.+++.+|+|.|+|.+.+.... ...+.|.|. ..+ ++...+..+....+.+|+++.|.|
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~v~~g~~v~L~C 158 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT----------GHTPSNNVHVSTAEVVQVDEGNDITMTC 158 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEET----------TTSCCSCCEECCCSEEECCTTCCEEECC
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEe----------ccCCCCeEEEecCceEEecCCCcEEEEE
Confidence 467999999999999999999986542 235666665 111 122223334456777899999999
Q ss_pred EEeeCCCCCCeEEEeecCeEEeeecCC-------------------CceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 162 VVRFSPEPPAYIFWNHNEAIISYDSQR-------------------GGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 162 ~~~~~p~p~~~v~W~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
.+.+.|. +.+.|++++..+...... ......... ...|.|.++..+|+|.|+|.|
T Consensus 159 ~~~g~p~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a 232 (250)
T 2fbo_J 159 PCTDCAN--ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSG----ARNLVIRAAKITDAGRVWCEL 232 (250)
T ss_dssp CEESCTT--CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEET----TTEEEECSCCGGGCEEEEEEE
T ss_pred EecCCCC--CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCC----ccEEEEecCCcccCEEEEEEe
Confidence 9999854 499999998765321100 000000001 137999999999999999999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.|.+|
T Consensus 233 ~N~~g 237 (250)
T 2fbo_J 233 ATGQG 237 (250)
T ss_dssp ESSSS
T ss_pred cCCcc
Confidence 99665
No 86
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.71 E-value=3.1e-15 Score=113.87 Aligned_cols=119 Identities=22% Similarity=0.338 Sum_probs=89.6
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEecCCeEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~ 165 (236)
....|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .++..+. ......+..|+.+.|.|.+.+
T Consensus 59 ~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~-------------~~p~~~~~~~~~~~v~~g~~~~l~C~~~g 125 (284)
T 2rik_A 59 NTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ-------------EPPRFIKKLEPSRIVKQDEHTRYECKIGG 125 (284)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------------CCCEEEECCCSEEEEETTCCEEEEEEEES
T ss_pred CEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEcc-------------CCCcccccCCCceEecCCceEEEEEEEee
Confidence 35789999999999999999999876543 56777776 2222222 234567889999999999998
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. |.+.+.|++++..+... ......... ....|.|.++..+|.|.|+|.+.|..|
T Consensus 126 ~--p~~~v~W~~~~~~~~~~---~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g 179 (284)
T 2rik_A 126 S--PEIKVLWYKDETEIQES---SKFRMSFVE---SVAVLEMYNLSVEDSGDYTCEAHNAAG 179 (284)
T ss_dssp S--SCCEEEEEETTEECCCS---SSEEEEEET---TEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred e--CCCEEEEEECCEECcCC---CcEEEEEcC---CEEEEEECCCCcccCEEEEEEEEcCCC
Confidence 8 44599999999887532 222222222 235799999999999999999999987
No 87
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.71 E-value=1.9e-15 Score=116.25 Aligned_cols=123 Identities=17% Similarity=0.231 Sum_probs=88.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|...... .....+..+....+..|+.+.|.|.+.+.|
T Consensus 61 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~--------~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p 132 (305)
T 2nzi_A 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKI--------HLPKTLEGMGAVHALRGEVVSIKIPFSGKP 132 (305)
T ss_dssp EEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEE--------CCCHHHHSSCCEEEETTCCEEEEEEEEEES
T ss_pred EEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCcc--------CCCccccccccEEecCCCEEEEEEEECCCC
Confidence 4589999999999999999999886543 5566666521000 011112223457788999999999999984
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcc-cCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQK-ARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.|++++..+.. ..+....... ....|.|.+ +..+|.|.|+|.|.|..|
T Consensus 133 --~p~i~W~~~~~~~~~---~~~~~~~~~~---~~~~l~i~~~~~~~d~G~Y~C~a~N~~G 185 (305)
T 2nzi_A 133 --DPVITWQKGQDLIDN---NGHYQVIVTR---SFTSLVFPNGVERKDAGFYVVCAKNRFG 185 (305)
T ss_dssp --CCEEEEEESSSBCCS---SSSCEEEECS---SEEEEEETTCCCSTTCEEEEEEEEETTE
T ss_pred --CCEEEEEECCEECCC---CCcEEEEEcC---CceEEEEecCCccCccEEEEEEEEeCCC
Confidence 459999999877643 1223322221 235799999 999999999999999998
No 88
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.71 E-value=3.5e-16 Score=113.80 Aligned_cols=165 Identities=19% Similarity=0.278 Sum_probs=95.6
Q ss_pred EEEcCCCCCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCcee
Q psy10361 38 LQLKYPQHKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAH 117 (236)
Q Consensus 38 L~i~~~~~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 117 (236)
+.+.-+..++.-...|.+ +...+.|.+++....... .....|.|.+++.+|+|.|+|.+.+... .
T Consensus 10 ~~~~~~~~G~~v~L~C~~-----------p~~~i~W~k~g~~l~~~~--~~~~~L~i~~v~~~DsG~Y~C~~~~~~s--~ 74 (204)
T 1sy6_A 10 VKVYDYQEDGSVLLTCDA-----------EAKNITWFKDGKMIGFLT--EDKKKWNLGSNAKDPRGMYQCKGSQNKS--K 74 (204)
T ss_dssp EEECCCCSSSEEEEEECS-----------CSSEEEEEETTEEEEEEE--SSCCCEEEEEGGGCCEEEEEEESSSSCC--C
T ss_pred eeEEeecCCCeEEEEEcC-----------CCCEEEEEECCEECCCCC--CCCCeEEeCCCCcCCCEEEEEEecCCCC--e
Confidence 344445566777777876 123456666664432211 1345799999999999999999765332 2
Q ss_pred EEEEEEEEE----Eee--------CCccc-c---c-CCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe
Q psy10361 118 YIYLTVVVL----VIN--------DGKYL-L---V-PEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA 180 (236)
Q Consensus 118 ~~~l~v~~~----~~~--------~~~~~-~---~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~ 180 (236)
.+.+.+... ... ..+.. . . +...+.+...+.....+|+++.|.|. +.| .+.+.|++++.
T Consensus 75 ~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~--g~p--~p~i~W~k~~~ 150 (204)
T 1sy6_A 75 PLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYP--GSEILWQHNDK 150 (204)
T ss_dssp CEEEEEEC------------------------------------CCCCEEEEETTEEEEECS--CCC--SSCEEEEETTE
T ss_pred eEEEEEEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC--CCC--CCceEEEECCE
Confidence 233333200 000 00000 0 0 00011222222223338999999998 564 45899999998
Q ss_pred EEeeecCCCceEEEeecCcceEEEEEEccc-CCCCCeEEEEEeCCCCCc
Q psy10361 181 IISYDSQRGGVNVITEKGETTVSYLLIQKA-RPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~y~C~a~n~~g~ 228 (236)
.+........+ ....+ .|.|.++ ..+|+|.|+|.|.|..|.
T Consensus 151 ~l~~~~~~~~~--~~~~~-----~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 151 NIGGDEDDKNI--GSDED-----HLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp EESCCTTCTTE--EEETT-----EEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred ECCCccCCceE--ecCCC-----EEEEeeCCccccCEEEEEEeccCCCC
Confidence 87542111111 12233 7999999 999999999999999984
No 89
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.70 E-value=6.3e-16 Score=114.05 Aligned_cols=134 Identities=21% Similarity=0.309 Sum_probs=90.8
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccc-c-CCCcEEEecCCeEEEEeEEee
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDI-I-GGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~~~~l~C~~~~ 165 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ....+.|. ..+...+.+ . .+....+..|+.+.|.|.+.+
T Consensus 75 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~----------~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~ 144 (231)
T 3ojm_B 75 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV----------ERSRHRPILQAGLPANASTVVGGDVEFVCKVYS 144 (231)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE----------CCCCCCCEECTTCSCCEEEETTCCEEEECCEEC
T ss_pred cceEEEecCCcccCEEEEEEEecccCcccccEEEEEE----------cCCCCCCceeeccCCceEEEeCCcEEEEEEEec
Confidence 4579999999999999999999876543 56667776 111111122 2 245678889999999999999
Q ss_pred CCCCCCeEEEee----cCeEEeeecCCCceEEEeec--CcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 166 SPEPPAYIFWNH----NEAIISYDSQRGGVNVITEK--GETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 166 ~p~p~~~v~W~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
.| .+.+.|++ ++..+...... ........ .......|.|.++..+|.|.|+|.|.|..| .++.|.|.
T Consensus 145 ~p--~p~v~W~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (231)
T 3ojm_B 145 DA--QPHIQWIKHVEKNGSKYGPDGLP-YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL 220 (231)
T ss_dssp SS--CCEEEEEEECCBTTBSBCTTSCB-CEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CC--CCEEEEEECCCCCCccccCCCcc-eEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEe
Confidence 84 45999999 66655322111 11111111 011223699999999999999999999998 34455553
No 90
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.70 E-value=1.1e-18 Score=141.14 Aligned_cols=202 Identities=13% Similarity=0.118 Sum_probs=114.9
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEe---c--------------ceeEEe------------------
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVR---H--------------RDIHLL------------------ 66 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~---~--------------~~~~~~------------------ 66 (236)
..|+.+.....+.+++|.|.+++.+|+|.|.|.+.+.. . +.....
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~ 143 (434)
T 1igy_B 64 KDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 143 (434)
T ss_dssp TTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE
Confidence 46887765333457899999999999999999875411 0 000000
Q ss_pred ----cce-eeEEecCCcEE-------EEcC-CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCc
Q psy10361 67 ----TTG-RYTYTNDQRFR-------VINN-PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGK 132 (236)
Q Consensus 67 ----~~~-~~~~~~~~~~~-------~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~ 132 (236)
+.. .+.|.+++... .... .......|.|..++.+| |.|+|.+.+..+.. ....+.+.. ....
T Consensus 144 ~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~---~~~~ 219 (434)
T 1igy_B 144 KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRD---CGCK 219 (434)
T ss_dssp EEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCC---CCCC
T ss_pred eeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCC---CCCc
Confidence 111 45665554320 0000 00112468999999999 99999999976543 222222110 0000
Q ss_pred ccc--cCC-CcccccCCCcE-EEecCCeEEEEeEEeeCC-C-CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEE
Q psy10361 133 YLL--VPE-PETDIIGGPEV-FIENGSTINLTCVVRFSP-E-PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLL 206 (236)
Q Consensus 133 ~~~--~~~-~~~~~~~~~~~-~~~~g~~~~l~C~~~~~p-~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 206 (236)
... .+. +...+..+... .+.+|+++.|.|.+.+.+ . +.+.+.|++++..+...... ......+......+.|.
T Consensus 220 v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~-~~~~~~~~~~~~~~~L~ 298 (434)
T 1igy_B 220 PCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQ-PREEQFNSTFRVVSALP 298 (434)
T ss_dssp CCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCC-CCCCCCSSSCCCCCCEE
T ss_pred cccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccC-cceeCCCCcEEEEEEEE
Confidence 000 000 11111212211 167899999999999873 2 23589999998766421110 00000111112234699
Q ss_pred EcccCCCCCeEEEEEeCCCCCc
Q psy10361 207 IQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 207 i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|.++..+|.|.|+|.|.|..|.
T Consensus 299 i~~~~~~d~G~Y~C~a~n~~~~ 320 (434)
T 1igy_B 299 IMHQDWLNGKEFKCRVNSAAFP 320 (434)
T ss_dssp CCHHHHHHTCCCBCCBCCSSCS
T ss_pred ECHHHccCCCcEEEEEECCCCC
Confidence 9999999999999999999873
No 91
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.70 E-value=1.1e-15 Score=117.76 Aligned_cols=124 Identities=23% Similarity=0.390 Sum_probs=90.5
Q ss_pred cEEEEEcCCCC-CCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEecCCeEEEEeEEee
Q psy10361 89 DWTLQLKYPQH-KDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~-~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
...|.|.+++. +|+|.|+|.+.+..+. +..+.|.|.. .+. .|...+.+ ..+....+..|+++.|.|.+.+
T Consensus 62 ~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-----~~~--~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g 134 (304)
T 2yd9_A 62 GAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLR-----EDQ--LPSGFPNIDMGPQLKVVERTRTATMLCAASG 134 (304)
T ss_dssp EEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEEC-----GGG--CCTTCCEEEECCCCEEEETTSCEEECCEEEC
T ss_pred ceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEec-----ccc--CCCCCCeeecCCccEEEeCCCeEEEEEECcc
Confidence 47899999998 9999999999987764 3667788771 000 01111222 3345677889999999999998
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.| .+.+.|++++..+.......+... ..++ .|.|.++..+|.|.|+|.|.|..|
T Consensus 135 ~p--~~~v~W~k~~~~~~~~~~~~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g 188 (304)
T 2yd9_A 135 NP--DPEITWFKDFLPVDPSASNGRIKQ-LRSG-----ALQIESSEETDQGKYECVATNSAG 188 (304)
T ss_dssp SS--CCEEEEEETTEECCGGGGTTSEEE-CTTS-----CEEECSCCGGGCEEEEEEEEETTE
T ss_pred CC--CCeEEEEECCEECcCCCCcceEEe-CCCe-----EEEEccCCcccCEEEEEEEEeCCC
Confidence 84 459999999988754322223322 2222 799999999999999999999987
No 92
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.70 E-value=8.3e-17 Score=117.61 Aligned_cols=138 Identities=15% Similarity=0.177 Sum_probs=89.5
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC----ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH----QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 151 (236)
.|+.... ......|.|.+++.+|+|.|+|.+.+..+ ......|.|. ..+...+.+. .+....+
T Consensus 59 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~~~ 126 (213)
T 3mj8_L 59 DHFSGSN--SGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVL----------GQPNAAPSVTLFPPSSEE 126 (213)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEE----------CSCCBCCEEEEECCCHHH
T ss_pred CcEEEEe--cCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEe----------CCCCCCCeEEccCCCccc
Confidence 4555433 23567899999999999999999998765 2345667776 1111111211 1222223
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|+.+.|.|.+.+.+.|++.+.|++++..+.......... ..+......+.|.|..+..+|.|.|+|.|.|..+
T Consensus 127 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3mj8_L 127 LKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPS-KSDSKYMATSYLTMTADAWKSRNTFICKVTHGGN 201 (213)
T ss_dssp HTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE-EETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE
T ss_pred ccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcC-ccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc
Confidence 37999999999988632335999999998875311111111 1111122345799999999999999999999986
No 93
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.69 E-value=2.5e-17 Score=134.02 Aligned_cols=199 Identities=13% Similarity=0.125 Sum_probs=108.5
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEec---------------ce--eEEe-----------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRH---------------RD--IHLL----------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~---------------~~--~~~~----------------- 66 (236)
...||.+.......+++|+|.+++.+|+|.|.|.+.+..+ .. ..+.
T Consensus 64 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~ 143 (457)
T 1hzh_H 64 FQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSK 143 (457)
T ss_dssp TTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSC
T ss_pred ccCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCcccc
Confidence 3578888765455678999999999999999999975421 00 1110
Q ss_pred -----------------cc-eeeEEecCCcE------E-EEcCCC--CCcEEEEEcCCCCCCCEEEEEEeecCCCce-eE
Q psy10361 67 -----------------TT-GRYTYTNDQRF------R-VINNPT--SDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HY 118 (236)
Q Consensus 67 -----------------~~-~~~~~~~~~~~------~-~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~ 118 (236)
+. ..+.|.+++.. . ...... .....|.|.+++.+| |.|+|.+.+..+.. ..
T Consensus 144 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 222 (457)
T 1hzh_H 144 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 222 (457)
T ss_dssp CCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee
Confidence 10 23566555421 0 111100 012368999999999 99999999865433 22
Q ss_pred EEEEEEEEEeeCCcccc---------cC-CCcccccCCCcE-EEecCCeEEEEeEEeeCCCC--CCeEEEeecCeEEeee
Q psy10361 119 IYLTVVVLVINDGKYLL---------VP-EPETDIIGGPEV-FIENGSTINLTCVVRFSPEP--PAYIFWNHNEAIISYD 185 (236)
Q Consensus 119 ~~l~v~~~~~~~~~~~~---------~~-~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~p~p--~~~v~W~~~~~~~~~~ 185 (236)
..+.+. ..+..+ .. .+...+..+... .+..|+++.|.|.+.+.|.+ ...+.|++++..+...
T Consensus 223 ~~v~~~-----~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~ 297 (457)
T 1hzh_H 223 KKAEPK-----SCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNA 297 (457)
T ss_dssp EECCCC-----CSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCC
T ss_pred EEeccc-----CCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccc
Confidence 222211 000000 00 011111112211 14579999999999987421 1389999999877421
Q ss_pred cCCCceEEEeecCc-ceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 186 SQRGGVNVITEKGE-TTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 186 ~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. ........++. ...+.|.|.....+|+|.|+|.|.|..+
T Consensus 298 ~--~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~ 338 (457)
T 1hzh_H 298 K--TKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKAL 338 (457)
T ss_dssp E--EEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTS
T ss_pred c--cccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCC
Confidence 0 01111112221 1112333333333349999999998764
No 94
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.69 E-value=1.3e-15 Score=125.63 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=52.9
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+..|+.+.|.|.+.+.+.+...+.|++++..+...... .......++ ....+.|.|.....+|.|.|+|.|.|..+
T Consensus 308 ~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~-~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~ 385 (512)
T 1zvo_C 308 DLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEE-GLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSL 385 (512)
T ss_pred HhccCCceEEEEEEeceECCCeEEEEEECCEeccCceec-cceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCC
Confidence 355799999999998862123589999999875411111 111111122 23456799999999999999999999876
No 95
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.69 E-value=4.2e-16 Score=114.99 Aligned_cols=121 Identities=17% Similarity=0.106 Sum_probs=74.7
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
+...|.|.+++.+|+|.|+|.+.|..+.. ...+.+.. . .. .........+..|+.+.|.|.+.+..
T Consensus 81 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~-~~~v~~~~----------~-~~--~~~~~~~~~~~~g~~v~l~c~~~g~~ 146 (226)
T 4f80_A 81 GKAALRIHNVTASDSGKYLCYFQDGDFYE-KALVELKV----------A-AL--GSDLHVDVKGYKDGGIHLECRSTGWY 146 (226)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEE----------E-BC--CCCCEEEEEEEETTEEEEEEEEEEEB
T ss_pred CeEEEEEeeCchHHCeeEEEEEECCCcEE-EEEEEEee----------c-cc--eecccceeeeccCCceeeEEEeccCC
Confidence 45789999999999999999999876543 23344431 0 11 11122345677899999999998741
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.|++++..+..... .......++ ....+.+..++.+|.|.|+|.|.|.+|
T Consensus 147 -P~p~i~W~k~~~~~~~~~~--~~~~~~~~g--~~~v~s~l~v~~~d~G~YtC~a~N~~g 201 (226)
T 4f80_A 147 -PQPQIQWSNNKGENIPTVE--APVVADGVG--LYAVAASVIMRGSSGEGVSCTIRSSLL 201 (226)
T ss_dssp -SCCEEEEECTTSCBCCCEE--CCCEECTTS--CEEEEEEEEECC----CEEEEEEETTT
T ss_pred -CCCEEEEEECCceEcCCCc--eEEEECCCC--cEEEEEEEEechhcCcEEEEEEEeCCC
Confidence 4459999986543321111 111112222 223344556788999999999999997
No 96
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.69 E-value=1.1e-15 Score=114.35 Aligned_cols=146 Identities=15% Similarity=0.229 Sum_probs=89.2
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeC--Cccc----ccCCCcccccCCCcEEEecCCeEEE
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVIND--GKYL----LVPEPETDIIGGPEVFIENGSTINL 159 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~g~~~~l 159 (236)
....|.|.+++.+|+|.|+|.+.+.... .....|.|....... .+.. ....+...+..+....+.+|+++.|
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L 151 (250)
T 3esu_F 72 TDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKI 151 (250)
T ss_dssp TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEE
T ss_pred CEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEE
Confidence 4568999999999999999999886542 233456665100000 0000 0001122333455677899999999
Q ss_pred EeEEeeCCCCCCeEEEeec--CeEEeee--------------cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 160 TCVVRFSPEPPAYIFWNHN--EAIISYD--------------SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 160 ~C~~~~~p~p~~~v~W~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
.|.+.+.+.+.+.+.|+++ +..+... ....++.+..+. .....+|.|.++..+|+|.|.|.+.
T Consensus 152 ~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~ 230 (250)
T 3esu_F 152 SCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADK-SSSTAYMQLSSLTSVDSAVYFCARS 230 (250)
T ss_dssp EEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEG-GGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecC-CCCeEEEEECCCCcccCEEEEEEEe
Confidence 9999887533569999987 3322110 111334433222 1234579999999999999999999
Q ss_pred C-------CCCceEEEEE
Q psy10361 224 N-------SQAKSVMVNV 234 (236)
Q Consensus 224 n-------~~g~~~~~~v 234 (236)
+ ..|....|.|
T Consensus 231 ~~~~~~~~~~g~gt~L~V 248 (250)
T 3esu_F 231 GLLRYAMDYWGQGTSVTV 248 (250)
T ss_dssp CSSTTCCCEECCCEEEEE
T ss_pred cCCCccHhhcCCCcceEe
Confidence 7 2355566665
No 97
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.69 E-value=5.2e-16 Score=112.22 Aligned_cols=122 Identities=12% Similarity=0.177 Sum_probs=81.1
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCC-C---ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTP-H---QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV 163 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~-~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 163 (236)
....|.|.+++.+|+|.|+|.+.+.. + .+..+.|.|. .+.+.+.+...+...+.+|+++.|.|.+
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~-----------~~~~~p~i~~~~~~~v~~G~~v~L~C~~ 124 (198)
T 1ugn_A 56 KKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVT-----------GAYIKPTLSAQPSPVVNSGGNVTLQCDS 124 (198)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEE-----------CSSCCCEEEEESCSEEETTCCEEEEEEC
T ss_pred cccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEc-----------ccccCCccccCCccccCCCCcEEEEEec
Confidence 35689999999999999999998865 3 2455677776 1112233333333578899999999999
Q ss_pred eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 164 RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 164 ~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+. + +.+.|++++..+..... ........ .....|.|.++..+|+|.|+|.|.|..+
T Consensus 125 ~~~--~-~~v~W~k~g~~~~~~~~--~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 125 QVA--F-DGFILCKEGEDEHPQCL--NSQPHARG--SSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp SSC--C-SEEEEEEC------CEE--EC--------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CCC--C-cEEEEEECCCccCCccc--cccccCCC--cceeEEEecccCcccCeEEEEEEEeCCC
Confidence 876 2 49999999887632110 00000111 0235899999999999999999999864
No 98
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.69 E-value=1.3e-16 Score=113.32 Aligned_cols=118 Identities=19% Similarity=0.298 Sum_probs=85.5
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
....|.|.+++.+|+|.|+|.+.+... +..+.|.|. .+...+ ......+.+|+++.|.|.+.+.+
T Consensus 49 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~-s~~~~l~V~-------------~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~ 113 (176)
T 1f2q_A 49 TNSSLNIVNAKFEDSGEYKCQHQQVNE-SEPVYLEVF-------------SDWLLL-QASAEVVMEGQPLFLRCHGWRNW 113 (176)
T ss_dssp CSSEEEECSCCGGGCEEEEEECTTSSC-CCCEEEEEE-------------CSSEEE-EESCSEEETTSCEEEEEEEGGGC
T ss_pred CceEEEEeccceecCEEEEEEcCCccc-cccEEEEEe-------------Ccceee-cCCcceeeCCCCEEEEEEecCCC
Confidence 356899999999999999999987553 344666666 222222 22335678999999999995332
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC----ceEEEEEc
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA----KSVMVNVL 235 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g----~~~~~~v~ 235 (236)
|.+.+.|++++..+.... .. ..|.|.++..+|+|.|+|.|.|..+ ..+.|.|.
T Consensus 114 -p~~~~~W~~~g~~~~~~~---------~~-----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 114 -DVYKVIYYKDGEALKYWY---------EN-----HNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp -CEEEEEEEETTEECCSCC---------CS-----SEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred -CceEEEEEECCEEEeeec---------CC-----CeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 446999999998773211 11 2799999999999999999999754 34556553
No 99
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.69 E-value=7.9e-16 Score=112.23 Aligned_cols=121 Identities=21% Similarity=0.344 Sum_probs=85.0
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
.+.+|.|.+++.+|+|.|.|.+.+..... ....+.+. . .+...........+..|..+.+.|.+.+
T Consensus 77 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~c~~~g 144 (218)
T 4frw_A 77 LDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVL-----------V-PPLPSLNPGPALEEGQGLTLAASCTAEG 144 (218)
T ss_dssp TBCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-----------B-CCCCEEEECSCEETTCCSEEEEEEEEEE
T ss_pred CeEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEe-----------e-eccceeeeeeeeeeeeccccceeeeccC
Confidence 45689999999999999999998765433 22233333 1 1222222334556677899999999999
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. |++.+.|++++..+.... ...........+.|.|.++..+|.|.|+|.|.|..|
T Consensus 145 ~--p~p~i~W~~~~~~~~~~~-----~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g 199 (218)
T 4frw_A 145 S--PAPSVTWDTEVKGTTSSR-----SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGL 199 (218)
T ss_dssp B--SCCEEEEEESSCCEEEEE-----EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred C--cCceEEEEECCcccccCc-----eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCC
Confidence 8 446999999987765321 111122223456899999999999999999999998
No 100
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.69 E-value=1.1e-15 Score=113.74 Aligned_cols=126 Identities=20% Similarity=0.253 Sum_probs=87.7
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCccc-c-cCCCcEEEecCCeEEEEeEEee
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETD-I-IGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ....+.|. ..+...+. . ..+....+..|+.+.|.|.+.+
T Consensus 71 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~ 140 (241)
T 3grw_A 71 QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL----------ERSPHRPILQAGLPANQTAVLGSDVEFHCKVYS 140 (241)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE----------CCCCCCCEEEECTTCSEECCTTCCEEEEEEEEC
T ss_pred ceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEe----------ccCCCCceeecCCCccceecCCCEEEEEEEEec
Confidence 4579999999999999999999876543 55667776 11111112 2 2244667889999999999999
Q ss_pred CCCCCCeEEEee----cCeEEeeecCCCceEEE---eecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNH----NEAIISYDSQRGGVNVI---TEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.| .+.+.|++ ++..+...... ..... ..........|.|.++..+|.|.|+|.|.|..|
T Consensus 141 ~p--~p~v~W~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g 206 (241)
T 3grw_A 141 DA--QPHIQWLKHVEVNGSKVGPDGTP-YVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIG 206 (241)
T ss_dssp SS--CCEEEEEEECCSSSCSSCTTTCC-CEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CC--CCEEEEEEcccCCCcccCCCCce-eeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcc
Confidence 84 45999999 66655332111 11100 011112346899999999999999999999998
No 101
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.69 E-value=1.4e-16 Score=115.01 Aligned_cols=121 Identities=12% Similarity=0.186 Sum_probs=84.6
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc---eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ---AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
....|.|.+++.+|+|.|+|.+.|..+. +..+.|.|. .+...+.+...+...+.+|+++.|.|.+.
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~-----------~~~~~p~~~~~~~~~v~~G~~v~L~C~~~ 124 (196)
T 3p2t_A 56 NKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMT-----------GAYSKPTLSALPSPLVTSGKSVTLLCQSR 124 (196)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEE-----------CSSCCCEEEEESCSEECTTCCEEEEEEEE
T ss_pred ceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEec-----------CCCCCCEEEeCCcceecCCCeEEEEEecC
Confidence 4678999999999999999999987652 355667775 11122333322233678999999999998
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+. | +.+.|++++..+............ .....|.|.++..+|+|.|+|.|.|..+
T Consensus 125 ~~--~-~~~~w~k~g~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 125 SP--M-DTFLLCKERAAHPLLCLRSEHGAQ-----QHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EE--E-EEEEEEETTCCCGGGSEEEEEEEE-----EEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred CC--C-CEEEEEeCCCcccceeeccccccc-----CcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 74 3 489999998765321100000011 1234799999999999999999999875
No 102
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.68 E-value=1.6e-16 Score=113.85 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=86.2
Q ss_pred eEEecCCcEEEEcCCCCCcEEEEEcC-CCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCC-c-------ccccCCCc
Q psy10361 71 YTYTNDQRFRVINNPTSDDWTLQLKY-PQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDG-K-------YLLVPEPE 140 (236)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~-~-------~~~~~~~~ 140 (236)
+.|.+++...... .+..|.|.+ ++.+|+|.|+|.|.|..+. +..+.+.|........ + ....|...
T Consensus 29 i~W~k~g~~l~~~----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (186)
T 1jbj_A 29 LKWEKNGQELPQK----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDG 104 (186)
T ss_dssp CEEEETTEEECSC----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTC
T ss_pred eEEEECCEECCCC----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCccccc
Confidence 4555555433211 245799999 9999999999999987654 2333443331000000 0 00000000
Q ss_pred cccc-CCCcE---EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 141 TDII-GGPEV---FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 141 ~~~~-~~~~~---~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+... ..... .+..|+++.|.|.+ | .+.+.|++++..+..... .. ..|.|.++..+|+|
T Consensus 105 ~~~~~~~~~~~~~~~~~G~~v~l~C~~---p--~p~i~W~k~g~~i~~~~~--------~~-----~~L~i~~v~~~D~G 166 (186)
T 1jbj_A 105 SQTNKAKNLVQVDGSRGDGSVLLTCGL---T--DKTIKWLKDGSIISPLNA--------TK-----NTWNLGNNAKDPRG 166 (186)
T ss_dssp CSCCCCSSCCEECCCSSSCEEEEECSS---S--CSCEEEEETTEECCCSSC--------CS-----SCCEEEETTSCCEE
T ss_pred cccccccccccceecCCCCeEEEEeeC---C--CCeEEEEECCEECcccCC--------Cc-----ceEEECCCCcCcCE
Confidence 0000 01112 23489999999988 3 349999999988742111 11 26999999999999
Q ss_pred EEEEEeCCCCCceEEEE
Q psy10361 217 KYQCNPANSQAKSVMVN 233 (236)
Q Consensus 217 ~y~C~a~n~~g~~~~~~ 233 (236)
.|+|.|.|..|..++|+
T Consensus 167 ~Y~C~a~N~~g~~l~V~ 183 (186)
T 1jbj_A 167 TYQCQGAKETSNPLQVY 183 (186)
T ss_dssp EEEEEESSCEEEEEEEE
T ss_pred EEEEEEEcCcCCcEEEE
Confidence 99999999999775554
No 103
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.68 E-value=5.6e-16 Score=112.30 Aligned_cols=117 Identities=19% Similarity=0.285 Sum_probs=82.3
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
+...|.|.+++.+|+|.|+|.+.+..+. ...+.|.|. .+...+.+. ...+..|+.+.|.|.+.|.
T Consensus 65 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~-----------~~~~~p~~~---~~~~~~g~~v~l~C~~~g~ 130 (202)
T 3bp6_B 65 GKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVK-----------ASYMRIDTR---ILEVPGTGEVQLTCQARGY 130 (202)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-----------BCCCCEEEE---EEECTTTCCEEEEEEEEEB
T ss_pred CeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEec-----------CCCCcccEE---EEecCCCCeEEEEEEcccc
Confidence 3478999999999999999999987753 456677776 211111111 1234579999999999998
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
| .+.+.|++++..+... ......+ ....+.+..+..+|.|.|+|.|.|..|.
T Consensus 131 P--~p~v~W~~~~~~~~~~------~~~~~~~--~~~~~~i~~v~~~d~G~Y~C~a~N~~g~ 182 (202)
T 3bp6_B 131 P--LAEVSWQNVSVPANTS------HIRTPEG--LYQVTSVLRLKPQPSRNFSCMFWNAHMK 182 (202)
T ss_dssp S--CCEEEETTCCSCCEEE------EEECTTS--CEEEEEEEEECCCTTCCEEEEEEETTTT
T ss_pred C--CceEEEEeCCCCccCc------eeeCCCC--CEEEEEEEEEEcCCCCEEEEEEEcCCcc
Confidence 4 4599999987644211 1111111 2345677888999999999999999983
No 104
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.68 E-value=1.1e-15 Score=111.25 Aligned_cols=121 Identities=23% Similarity=0.384 Sum_probs=87.3
Q ss_pred EEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-eeCCC
Q psy10361 92 LQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-RFSPE 168 (236)
Q Consensus 92 L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~ 168 (236)
|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|.. . +......+....+..|+.+.|.|.+ .+.|
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~----------~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p- 140 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAI----------L--RDDFRQNPSDVMVAVGEPAVMECQPPRGHP- 140 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECE----------E--CSSCSBCCCCEEEETTSCEEEECBCCCEES-
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecceEEEEEe----------c--cccceeCCCceEecCCCcEEEEEecCCCCC-
Confidence 4556779999999999999876533 345666651 1 1122233456788899999999998 7874
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc----eEEEEEc
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK----SVMVNVL 235 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~----~~~~~v~ 235 (236)
.+.+.|++++..+.... .+... .++ .|.|.++..+|.|.|+|.|.|..|. .+.|.|.
T Consensus 141 -~~~v~W~~~~~~l~~~~--~~~~~--~~~-----~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~ 201 (212)
T 2v9r_A 141 -EPTISWKKDGSPLDDKD--ERITI--RGG-----KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL 201 (212)
T ss_dssp -CCEEEEEETTEEECTTS--TTEEE--ETT-----EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred -CCEEEEEECCccCCCCc--ceEEc--cCC-----eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE
Confidence 45999999998885321 12222 232 7999999999999999999999983 2566654
No 105
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.68 E-value=2.6e-16 Score=113.62 Aligned_cols=122 Identities=11% Similarity=0.136 Sum_probs=75.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc---eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ---AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
....|.|.+++.+|+|.|+|.+.+..+. +..+.|.|. .+.+.+.+...+...+.+|+++.|.|.+.
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~-----------~~~~~p~i~~~~~~~v~~G~~v~L~C~~~ 124 (196)
T 2d3v_A 56 NKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVT-----------GFYNKPTLSALPSPVVTSGENVTLQCGSR 124 (196)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEE-----------CSSCCCEEEC-----------CEEEEEES
T ss_pred cccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEec-----------CCCCCCeEEccCCccccCCCcEEEEEEcC
Confidence 5678999999999999999999886532 345677776 11123333333345678999999999998
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+.| +.+.|++++..+...... .. . .........|.|.++..+|+|.|+|.|.|..+
T Consensus 125 ~~p---~~~~W~k~g~~~~~~~~~--~~-~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 125 LRF---DRFILTEEGDHKLSWTLD--SQ-L-TPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp SCC---SEEEEEEC---CCEEEEE--CE-E-CTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred CCC---CEEEEEccCCcccccccc--cc-c-ccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 874 599999998766321100 00 0 00011335899999999999999999999764
No 106
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=2.5e-15 Score=112.27 Aligned_cols=148 Identities=18% Similarity=0.205 Sum_probs=92.8
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccc------cCCCcccc-cCC
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLL------VPEPETDI-IGG 146 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~------~~~~~~~~-~~~ 146 (236)
.|+.+.........+|.|.+++.+|+|.|+|.+.+... ......|.|. ..+... .....+.+ ..+
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~-----~~~~~~~~~~~~~~~~~~~~~~~~ 142 (247)
T 2ghw_B 68 GRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVS-----SGGGGSGGGGSGGGGSETTLTQSP 142 (247)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEEC-----SCC------------CCCCEEEEC
T ss_pred CcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEe-----cccccccccccCCCCcceEEEccC
Confidence 46665543334567899999999999999999988721 1233456665 000000 00011222 234
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEee--cCeEEeee---------cCCCceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNH--NEAIISYD---------SQRGGVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
....+.+|+++.|.|.+.+.| ++.+.|++ ++..+... ....+...... ....+|.|.++..+|+
T Consensus 143 ~~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~D~ 217 (247)
T 2ghw_B 143 ATLSLSPGERATLSCRASQSV--RSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGS---GTDFTLTISRLEPEDF 217 (247)
T ss_dssp SEEEECTTSCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECS---SSEEEEEECSCCGGGC
T ss_pred CEEEecCCCcEEEEEEeCCCc--cceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecC---CCeEEEEECcCCHHHC
Confidence 466788999999999998884 45999999 44332110 01123332211 1345799999999999
Q ss_pred eEEEEEeCCCC----CceEEEEE
Q psy10361 216 GKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 216 G~y~C~a~n~~----g~~~~~~v 234 (236)
|.|.|.|.|.. |....|.|
T Consensus 218 G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 218 AVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp EEEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEEEccCCCceEcCCEEEEE
Confidence 99999999864 35555555
No 107
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.68 E-value=6.1e-15 Score=110.85 Aligned_cols=155 Identities=14% Similarity=0.089 Sum_probs=94.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC----C-ceeEEEEEEEEEEeeCC--cccccCC-CcccccCCC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP----H-QAHYIYLTVVVLVINDG--KYLLVPE-PETDIIGGP 147 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~----~-~~~~~~l~v~~~~~~~~--~~~~~~~-~~~~~~~~~ 147 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+.. . ......|.|........ .....+. +......+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~ 146 (256)
T 3umt_A 67 KGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPS 146 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECS
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCC
Confidence 35666654333356789999999999999999998862 1 22445666651000000 0000000 112223345
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEe---ee------cCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIIS---YD------SQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~---~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
...+.+|+++.|.|.+.+.| .+.+.|++.. ..+. .. ....+....... ...+|.|.++..+|+|
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D~G 221 (256)
T 3umt_A 147 SLSASLGERVSITCRASQDI--GSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG---SDYSLTISSLESEDFV 221 (256)
T ss_dssp EEEECTTCCEEEEEEESSCC--TTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET---TEEEEEECSCCGGGCS
T ss_pred eEEEECCCCEEEEEEEecCC--CcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC---CEEEEEECCCChhHCE
Confidence 67889999999999998874 3499999842 2111 00 011233322221 3457999999999999
Q ss_pred EEEEEeCCCC----CceEEEEEc
Q psy10361 217 KYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 217 ~y~C~a~n~~----g~~~~~~v~ 235 (236)
.|.|.+.|.. |....|.|.
T Consensus 222 ~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 222 DYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEeeCCCcEECCCEEEEEE
Confidence 9999999964 456666664
No 108
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.68 E-value=2.1e-15 Score=113.48 Aligned_cols=144 Identities=14% Similarity=0.112 Sum_probs=95.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc------eeEEEEEEEEEEeeCCcccccCCCcccccCCCcE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ------AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEV 149 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+..+. ...+.|.|. ........+...
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~-------------~~~~v~~~p~~~ 131 (256)
T 1nqb_A 65 KSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS-------------SDIELTQTPLSL 131 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC-------------CCCCEEEECSEE
T ss_pred CCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec-------------ccccEEecCcEE
Confidence 4567665433345678999999999999999999987431 133456665 222222335567
Q ss_pred EEecCCeEEEEeEEeeCCCCC---CeEEEee--cCeEEeee---------cCCCceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPP---AYIFWNH--NEAIISYD---------SQRGGVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~---~~v~W~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
.+.+|+++.|.|.+.+.|.|. +.+.|++ ++..+... ....+....... ...+|.|.++..+|+
T Consensus 132 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~Ds 208 (256)
T 1nqb_A 132 PVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG---TDFTLKISRVEAEDL 208 (256)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGGC
T ss_pred EEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccC---CEEEEEECCCChHHC
Confidence 789999999999998874321 4899999 45433110 001233322111 345799999999999
Q ss_pred eEEEEEeCCCC----CceEEEEEc
Q psy10361 216 GKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 216 G~y~C~a~n~~----g~~~~~~v~ 235 (236)
|.|.|.|.|.. |....|.|.
T Consensus 209 G~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 209 GVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEEccCCceEECCCEEEEEE
Confidence 99999999853 445556554
No 109
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.68 E-value=3.2e-15 Score=108.52 Aligned_cols=125 Identities=12% Similarity=0.060 Sum_probs=84.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
..+.|.|.+++.+|+|.|.|.+.|..+. +..+.|.|. .++..+.+... ..+.+|+.+.|.|.+.+.
T Consensus 52 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~-----------~~p~~~~~~~~--~~~~~G~~~~L~C~~~~~ 118 (202)
T 1vca_A 52 TTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIY-----------SFPKDPEIHLS--GPLEAGKPITVKCSVADV 118 (202)
T ss_dssp TEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEE-----------BCCSCCEEEES--SCEETTSCEEEEEEEEEE
T ss_pred CccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEE-----------eCCCCCEeCCc--eEEcCCCCEEEEEEECCc
Confidence 3567999999999999999999998653 356777777 22222222222 457899999999999875
Q ss_pred C-CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 P-EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+ .+.+.+.|++++..+.......... ..........|.|.....+|+|.|+|.|.|..|
T Consensus 119 ~p~~~~~i~W~k~~~~l~~~~~~~~~~--~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~ 178 (202)
T 1vca_A 119 YPFDRLEIDLLKGDHLMKSQEFLEDAD--RKSLETKSLEVTFTPVIEDIGKVLVCRAKLHID 178 (202)
T ss_dssp BSGGGEEEEEEETTEEEEEEECCSCCS--SCCCEEEEEEEEECCCGGGTTCEEEEEEEECSC
T ss_pred CCCCCeEEEEEeCCeECcccccccccC--cCcceEEEEEEEEEeeeccCCCeEEEEEEcccc
Confidence 3 2224799999998875422110000 000011234577888888889999999999886
No 110
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.68 E-value=2.9e-15 Score=112.42 Aligned_cols=155 Identities=14% Similarity=0.134 Sum_probs=94.9
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcc--cccCCCcccccCCCcEEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKY--LLVPEPETDIIGGPEVFI 151 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 151 (236)
..|+.+..........|.|.+++.+|+|.|+|.+.+.... .....|.|.......... .....+......+....+
T Consensus 66 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v 145 (253)
T 3uzq_A 66 QGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAV 145 (253)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEE
T ss_pred CCcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEE
Confidence 3566665544445778999999999999999999885433 244556665000000000 000011122233456788
Q ss_pred ecCCeEEEEeEEeeCCCCCC----eEEEeecC--eEEe---ee------cCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 152 ENGSTINLTCVVRFSPEPPA----YIFWNHNE--AIIS---YD------SQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~----~v~W~~~~--~~~~---~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
.+|+++.|.|.+.+. |.+ .+.|++.. .... .. ....+....... ...+|.|.+++.+|+|
T Consensus 146 ~~G~~v~L~C~~~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~DsG 220 (253)
T 3uzq_A 146 SLGQRATISCRASEN--VDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSR---TDFTLTINPVEADDVA 220 (253)
T ss_dssp CTTSCEEEEEEESSC--CEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGGCE
T ss_pred eCCCCEEEEEEecCc--cccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCC---CEEEEEECCCCHHHCE
Confidence 999999999999886 433 89999842 1111 10 011233322211 3457999999999999
Q ss_pred EEEEEeCCCC----CceEEEEEc
Q psy10361 217 KYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 217 ~y~C~a~n~~----g~~~~~~v~ 235 (236)
.|.|.|.|.. |....|.|.
T Consensus 221 ~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 221 TYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp EEEEEECSSSSCCBCCCEEEEEC
T ss_pred EEEEEEccCCCcEECCCEEEEEc
Confidence 9999999965 466666664
No 111
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.68 E-value=6.4e-17 Score=117.60 Aligned_cols=120 Identities=23% Similarity=0.372 Sum_probs=85.2
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-ee
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-RF 165 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~ 165 (236)
..|.|.+++.+|+|.|+|.+.+..+ .+..+.|.|. .++..+.+ .....+..|+.+.|.|.+ .+
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~-----------~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~ 134 (209)
T 1nbq_A 68 TGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL-----------VPPSKPTV--NIPSSATIGNRAVLTCSEQDG 134 (209)
T ss_dssp TEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEE-----------BCCCCCCC--CCBSEEETTSCEEECCCCCSC
T ss_pred cEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEe-----------cCCcCCCc--ccccceecCCEEEEEEeCCCC
Confidence 5799999999999999999998643 2355667776 22121111 223457899999999997 77
Q ss_pred CCCCCCeEEEeecCeEEeeecCC------CceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCce
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQR------GGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKS 229 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~ 229 (236)
. |.+.+.|++++..+...... .+..... ....|.|.++..+|.|.|+|.|.|..|..
T Consensus 135 ~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 135 S--PPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNP-----TTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp B--SCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCT-----TTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred C--CCceeEEEECCeeCCCccccceeeeccceEEcC-----CcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 7 44599999999877542211 0111111 12379999999999999999999999844
No 112
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.68 E-value=1.9e-16 Score=116.44 Aligned_cols=122 Identities=20% Similarity=0.326 Sum_probs=81.2
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-eeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-RFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p 167 (236)
..+|.|.+++.+|+|.|+|.+.+....+..+.|.|. .+...+.+...+...+..|+++.|.|.+ .+.
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~-----------~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~- 138 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDFDSAAVSLQVA-----------APYSKPSMTLEPNKDLRPGNMVTITCSSYQGY- 138 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCCCCCCCCCCCC-----------BCCCCCEEECCC-----CCSEEEEEEEEEEEB-
T ss_pred eEEEEECCcccccCEEEEEEEEeCCCceEEEEEEEE-----------cCCCCCcEEeCCCceecCCceEEEEEeccccc-
Confidence 568999999999999999999876544455556665 2223334444444567789999999999 777
Q ss_pred CCCCeEEEeec-CeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHN-EAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.|+++ +..+... .... .........+.|.|.++..+|.|.|+|.|.|..|
T Consensus 139 -P~~~v~W~~~~~~~~~~~---~~~~-~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 194 (222)
T 4i0k_A 139 -PEAEVFWKDGQGVPLTGN---VTTS-QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVL 194 (222)
T ss_dssp -SCCEEEEECTTSCBCCSE---EEEE-EEECTTSCEEEEEEEEEECCTTCEEEEEEEETTT
T ss_pred -CCCeEEEEcCCCccCCCC---ccee-EEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCC
Confidence 4459999984 4333210 0111 1111122345688999999999999999999998
No 113
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=7.5e-16 Score=110.51 Aligned_cols=115 Identities=10% Similarity=0.157 Sum_probs=81.3
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
....|.|.+++.+|+|.|+|.+.+..+ .+..+.|.|. .+.+.+.+...+...+.+|+++.|.|.+.
T Consensus 55 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~-----------~~~~~p~i~~~p~~~v~~G~~v~L~C~~~ 123 (188)
T 1oll_A 55 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVT-----------EMYDTPTLSVHPGPEVISGEKVTFYCRLD 123 (188)
T ss_dssp CEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEE-----------SCSCCCEEEEESCSEEETTCEEEEEEECS
T ss_pred ceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEec-----------ccCCCCeEEECCCCccccCCEEEEEEEcC
Confidence 567899999999999999999987542 2345667776 11122333322345678999999999986
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
+. ++.+.|++++..+... ... . .....|.|.+++.+|+|.|+|.|.|..
T Consensus 124 ~~---~~~~~w~k~g~~~~~~-----~~~--~---~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 124 TA---TSMFLLLKEGRSSHVQ-----RGY--G---KVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp SS---CSEEEEEEESSSCEEE-----EEE--C---SSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CC---CCEEEEEECCcccccc-----ccC--C---CceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 53 3489999998655321 010 0 123479999999999999999998763
No 114
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.67 E-value=1.9e-16 Score=128.44 Aligned_cols=115 Identities=19% Similarity=0.174 Sum_probs=81.1
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCC-c----eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPH-Q----AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV 163 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~-~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~ 163 (236)
...|.|..++.+|+|.|+|.|.|..+ . ...+.|.|.. .| .......+....+.+|+++.|.|.+
T Consensus 326 ~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~----------~P-~~~~~~~p~~~~~~~g~~~~l~C~~ 394 (450)
T 1z7z_I 326 RAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY----------GP-RLDERDCPGNWTWPENSQQTPMCQA 394 (450)
T ss_dssp CCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEE----------EE-ECCSTTSCSEEEEETTCEECCCCCC
T ss_pred eEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEec----------CC-ceeeccCCCceeEcCCCeEEEEEec
Confidence 34799999999999999999986432 2 2456666661 11 1111112346788999999999999
Q ss_pred eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 164 RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 164 ~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
.|.| .+.+.|++++..+.. . +. .+ .+..+|+|.|+|.|.|..| .++.|.|.
T Consensus 395 ~g~P--~p~i~W~~~g~~~~~---~---------g~----~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 448 (450)
T 1z7z_I 395 WGNP--LPELKCLKDGTFPLP---I---------GE----SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVL 448 (450)
T ss_dssp EEES--CCEEEEEETTTEECC---T---------TS----CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccCC--CCcEEEEECCcccCC---C---------CC----eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEE
Confidence 9995 459999999874421 1 10 12 5778999999999999998 44455554
No 115
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.67 E-value=1.9e-15 Score=115.43 Aligned_cols=118 Identities=21% Similarity=0.346 Sum_probs=87.7
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
....|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .++.....+....+.+|+++.|.|.+.+
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~-------------~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 126 (291)
T 1qz1_A 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF-------------QKLMFKNAPTPQEFKEGEDAVIVCDVVS 126 (291)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE-------------CCSEEEECCSSEEEETTSCEEECCEEEC
T ss_pred CeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEee-------------ccccccCCCCcccccCCCeEEEEEEecc
Confidence 45789999999999999999999877533 45556665 2222333455677899999999999998
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.| .+.+.|++++..+... ...+.... .++ .|.|.++..+|.|.|+|.|.|..+
T Consensus 127 ~p--~~~v~W~~~~~~~~~~-~~~~~~~~-~~~-----~L~i~~~~~~d~G~Y~C~a~n~~~ 179 (291)
T 1qz1_A 127 SL--PPTIIWKHKGRDVILK-KDVRFIVL-SNN-----YLQIRGIKKTDEGTYRCEGRILAR 179 (291)
T ss_dssp SS--CCEEEEEETTSCSSTT-CCTTEEEC-TTS-----CEEETTCCGGGCEEEEEEEEEGGG
T ss_pred CC--CCEEEEEECCEEcccC-CCceEEEc-cCC-----cEEEccCccccCeEEEEEEEecCC
Confidence 84 4599999998776431 12222222 222 699999999999999999998764
No 116
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.67 E-value=8.4e-17 Score=117.45 Aligned_cols=139 Identities=14% Similarity=0.192 Sum_probs=88.4
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEe
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIE 152 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 152 (236)
.|+.... ......|.|.+++.+|+|.|+|.+.+..+ ......|.|. ..+...+.+. .+....+.
T Consensus 57 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~v~~~~~~~~~~ 124 (211)
T 3tv3_L 57 DRFSGSK--SGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVL----------GQPKAAPSVTLFPPSSEEL 124 (211)
T ss_dssp TTEEEEE--ETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEEC----------CSCCBCCEEEEECCCHHHH
T ss_pred CcEEEEc--cCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEe----------CCCCcCCeeEecCCchhhh
Confidence 4555432 22567899999999999999999998765 2244566665 1111111111 12112223
Q ss_pred cCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 153 NGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|+.+.|.|.+.+.+.|.+.+.|++++..+.............+......+.|.|..+..+|.|.|+|.|.|..+
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~ 199 (211)
T 3tv3_L 125 QANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 199 (211)
T ss_dssp HTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTE
T ss_pred cCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCC
Confidence 699999999998864345699999999887431100011111111123346799999988999999999999986
No 117
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.67 E-value=4.2e-17 Score=126.82 Aligned_cols=131 Identities=17% Similarity=0.200 Sum_probs=79.2
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEP 169 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 169 (236)
..|.|.+++.+|+|.|+|.+.+..... ...+.|.. ...... ++...+..+.... ..|+.+.|.|.+.+.+.+
T Consensus 178 ~~L~I~~~~~~D~G~Y~C~a~n~~~~~-~~~~~v~~-----~~~~~~-~P~v~~~~~~~~~-~~g~~~~l~C~~~g~~p~ 249 (323)
T 2wqr_A 178 STLPVGTRDWIEGETYQCRVTHPHLPR-ALMRSTTK-----TSGPRA-APEVYAFATPEWP-GSRDKRTLACLIQNFMPE 249 (323)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTSSS-CEEEEECC-----CCSCCB-CCEEEEEECCCCT-TCTTEEEEEEEEEEEBSS
T ss_pred EEEEECHHHccCCCCEEEEEECCCCCC-CeeeEEEc-----cCCCCC-CCEEEEeCCChHH-hcCCcEEEEEEeeeeeCC
Confidence 479999999999999999999875322 22344420 000000 1111111111111 129999999999884323
Q ss_pred CCeEEEeecCeEEeeecCCCceEEEeec-CcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 170 PAYIFWNHNEAIISYDSQRGGVNVITEK-GETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 170 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
...+.|++++..+..............+ .....+.|.|..+..+|+|.|+|.|.|....
T Consensus 250 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 250 DISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 3489999999887431100000011112 2234567999999999999999999999864
No 118
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.67 E-value=7.8e-16 Score=116.29 Aligned_cols=116 Identities=18% Similarity=0.158 Sum_probs=80.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeec-CCCc----eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeE
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVST-TPHQ----AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCV 162 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~-~~~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~ 162 (236)
....|.|..+..+|.|.|+|.+.+ ..+. +..+.|.|.. .| .......+....+.+|+.+.|.|.
T Consensus 140 ~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~----------~p-~~~~~~~p~~~~v~~g~~~~l~C~ 208 (265)
T 2oz4_A 140 PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY----------GP-RLDERDCPGNWTWPENSQQTPMCQ 208 (265)
T ss_dssp SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEE----------EE-ECCGGGSCSEEEEETTCEECCCCC
T ss_pred CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEe----------CC-ccccccCCCccEEcCCCeEEEEeE
Confidence 346688999999999999999975 3232 1456677661 11 111222245678899999999999
Q ss_pred EeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 163 VRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 163 ~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
+.|.| .+.+.|++++..+.. .+ .+. .+..+|+|.|+|.|.|..| .++.|.|.
T Consensus 209 ~~g~P--~p~i~W~~~~~~~~~------------~g-----~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 209 AWGNP--LPELKCLKDGTFPLP------------IG-----ESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp CEEES--CCEEEEEETTTEECC------------TT-----SCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CccCC--CCeEEEEECCcccCC------------CC-----cEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 99994 459999999873211 11 122 3778999999999999998 34455554
No 119
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.67 E-value=2.7e-16 Score=112.31 Aligned_cols=109 Identities=17% Similarity=0.246 Sum_probs=82.0
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
...|.|.+++.+|+|.|+|.+.+..+ .+.|.|.. . ..++...+.+|+++.|.|.+.+.
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~---~~~l~V~~----------~-------~~~~~~~v~~g~~~~l~C~~~~~-- 124 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKE---EVQLLVFG----------L-------TANSDTHLLQGQSLTLTLESPPG-- 124 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEE---EEEEEEEE----------E-------EESSCSEEETTCCEEEEEECCTT--
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCC---cEEEEEEE----------e-------cCCCCceeecCCCEEEEEEcCCC--
Confidence 45699999999999999999987642 45566651 1 11223467899999999999887
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
|.+.+.|++++..+.. .. ..|.|.++..+|+|.|+|.|.|..+ .++.|.|.
T Consensus 125 p~~~v~W~~~~~~~~~-----------~~-----~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 125 SSPSVQCRSPRGKNIQ-----------GG-----KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp CCCEEEEECTTSCEEE-----------ES-----SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEEeCCCcccc-----------Cc-----eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 5569999998754421 12 2799999999999999999999886 44455554
No 120
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.67 E-value=5.1e-15 Score=109.92 Aligned_cols=144 Identities=17% Similarity=0.300 Sum_probs=90.8
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC------ceeEEEEEEEEEEeeCCcccccCC---C------cc
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH------QAHYIYLTVVVLVINDGKYLLVPE---P------ET 141 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~---~------~~ 141 (236)
.|+.+.. .......|.|.+++.+|+|.|.|.+.+..+ ......|.|.. .+. + ..
T Consensus 61 ~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~----------~~~~~~p~~~~~~~~ 129 (238)
T 2p1y_A 61 DGYKASR-PSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLG----------SADDAKKDAAKKDGQ 129 (238)
T ss_dssp TTCEEEC-CSSSBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEEC----------CCHHHHHHHHHHHTC
T ss_pred ceEEEEc-cCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEec----------cCCCCcCCcccceee
Confidence 4555543 223466899999999999999999988642 11334666651 110 0 01
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEeeec------CCCceEEEeecCcceEEEEEEccc
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISYDS------QRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
....+....+.+|+++.|.|.+.+.| .+.+.|++++. .+.... ...+...... ......+|.|.++
T Consensus 130 v~~~p~~~~v~~G~~v~L~C~~~~~p--~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v 206 (238)
T 2p1y_A 130 VRQSPQSLTVWEGETAILNCSYENSA--FDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFN-KREKKLSLHIADS 206 (238)
T ss_dssp CEEECSEEEEETTSCEEEEEECCCTT--CCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEE-TTTTEEEEEETTC
T ss_pred EEccCceEEEeCCCeEEEEEEEecCC--CCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEec-CCCCeEEEEEcCC
Confidence 22235567789999999999998884 45999998641 111100 0122222211 1123468999999
Q ss_pred CCCCCeEEEEEeCCC------CCceEEEEE
Q psy10361 211 RPSDNGKYQCNPANS------QAKSVMVNV 234 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~------~g~~~~~~v 234 (236)
..+|+|.|.|.|.|. .|....|.|
T Consensus 207 ~~~D~G~Y~C~a~n~~~~~~~~g~gt~l~V 236 (238)
T 2p1y_A 207 QPGDSATYFCAAIDTNAYKVIFGKGTHLHV 236 (238)
T ss_dssp CGGGCEEEEEEEEETTTTEEEECCCEEEEE
T ss_pred CHHHCEEEEEEEeeCCCCeEEECCCEEEEE
Confidence 999999999999998 345555655
No 121
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.66 E-value=1.3e-15 Score=111.46 Aligned_cols=116 Identities=22% Similarity=0.363 Sum_probs=83.9
Q ss_pred EEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-eeCCC
Q psy10361 92 LQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-RFSPE 168 (236)
Q Consensus 92 L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~ 168 (236)
|.|.+++.+|+|.|+|.+.+..+.. ....+.|.. . +......+....+..|+.+.|.|.+ .+.
T Consensus 71 l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~----------~--~~~~~~~~~~~~~~~g~~v~l~C~~~~g~-- 136 (217)
T 2vr9_A 71 RTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAV----------L--RDDFRVEPKDTRVAKGETALLECGPPKGI-- 136 (217)
T ss_dssp SCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECE----------E--CCSCSBCCCCEEECTTSCEEECCBCCCEE--
T ss_pred EEeccCCcccCceEEEEEecCCCccccccceEEEEE----------e--CCCcEECCCccEEcCCCeEEEEEECCCCC--
Confidence 3688999999999999999876543 345555551 1 1112233456778899999999998 787
Q ss_pred CCCeEEEeecCeEEeeec-----CCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDS-----QRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.|++++..+.... ...+.... ..+ .|.|.++..+|.|.|+|.|.|..|
T Consensus 137 p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~-~~~-----~L~i~~~~~~d~G~Y~C~a~N~~G 194 (217)
T 2vr9_A 137 PEPTLIWIKDGVPLDDLKAMSFGASSRVRIV-DGG-----NLLISNVEPIDEGNYKCIAQNLVG 194 (217)
T ss_dssp SCCEEEEEETTEEECCCCCC---CCCSEEEE-TTT-----EEEESSCCSTTCEEEEEEEEETTE
T ss_pred CCCeEEEEECCcCCCcccccccccCCcEEec-CCC-----cEEEeeCCHHHCeEEEEEEEcccc
Confidence 445999999998875311 11222222 222 799999999999999999999998
No 122
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.66 E-value=2.3e-15 Score=129.69 Aligned_cols=127 Identities=14% Similarity=0.146 Sum_probs=80.7
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
..|.|.+++.+|.|.|+|.+.+..... ....+.+. ..+.+...+..+....+.+|+++.|.|.+.+.+
T Consensus 183 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~----------~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~ 252 (772)
T 3v2a_R 183 KGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVV----------GYRIYDVVLSPSHGIELSVGEKLVLNCTARTEL 252 (772)
T ss_dssp TEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEE----------CCCEEEEEEECCSCEEEETTCCEEEEEEEEECT
T ss_pred CCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEe----------cCccceeeeCCCCceEEecCCcEEEEEEEecCC
Confidence 469999999999999999998764322 22333333 011112222333456889999999999999865
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEee---cCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITE---KGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|.+.+.|++++..+...... ....... ......+.|.|.++..+|+|.|+|.+.|..|
T Consensus 253 ~~~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 314 (772)
T 3v2a_R 253 NVGIDFNWEYPSSKHQHKKLV-NRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 314 (772)
T ss_dssp TCCCEEEEECC--------CE-EEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSC
T ss_pred CCceeEEEecCCccCCCceee-eccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCc
Confidence 466789999998765321100 0000000 1122446899999999999999999999887
No 123
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.66 E-value=4.1e-16 Score=113.76 Aligned_cols=138 Identities=16% Similarity=0.149 Sum_probs=85.7
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEec
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIEN 153 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (236)
.|+.... ......|.|.+++.+|+|.|.|.+.+..+.. ....|.|. .+...+.+. .++...+..
T Consensus 59 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~P~v~~~~~~~~~~~ 125 (210)
T 1lk3_L 59 ARFSGSG--SGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELK-----------RADAAPTVSIFPPSTEQLA 125 (210)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-----------CCCBCCEEEEECCCHHHHT
T ss_pred ccEEEEe--cCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEc-----------CCCcCCeEEEECCchhhcc
Confidence 4555432 2245689999999999999999998865432 33456665 111111211 111112236
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|+.+.|.|.+.+.+.++..+.|++++..+... ..........+......+.|.|..+..+|+|.|+|.|.|...
T Consensus 126 g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 126 TGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred CCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 89999999998743123489999999876421 000000000111122345899999999999999999999875
No 124
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.66 E-value=3.5e-16 Score=114.26 Aligned_cols=138 Identities=15% Similarity=0.188 Sum_probs=85.5
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEec
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIEN 153 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 153 (236)
.|+.... ......|.|.+++.+|+|.|+|.+.+..+.. ....|.|. .+...+.+ ..++......
T Consensus 60 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~p~v~~~~~~~~~~~ 126 (213)
T 3d9a_L 60 SRFSGSG--SGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIK-----------RADAAPTVSIFPPSSEQLT 126 (213)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-----------CCCBCCEEEEECCCHHHHH
T ss_pred ccEEEEc--CCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEe-----------cCCCCceeEeECCChhhcC
Confidence 4555432 1245689999999999999999998875432 33456665 11111111 1121112236
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|+.+.|.|.+.+.+.++..+.|++++..+... ..........+......+.|.|.++..+|.|.|+|.|.|...
T Consensus 127 g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3d9a_L 127 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 201 (213)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred CCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccC
Confidence 88999999998742122489999999887431 000000000011112345899999999999999999999875
No 125
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.66 E-value=8.6e-15 Score=104.35 Aligned_cols=153 Identities=15% Similarity=0.206 Sum_probs=94.2
Q ss_pred CCceEEEEcCCCCCCCeeEEEEEEEEe--cceeEE-ecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEe
Q psy10361 33 SDDWTLQLKYPQHKDTGIYECQVSFVR--HRDIHL-LTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQV 109 (236)
Q Consensus 33 ~~~~~L~i~~~~~~D~G~Y~C~v~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 109 (236)
+.+++|.+........- =.+.|.+ ...... ...+......+.|+.+. .+++|.|.+++.+|+|.|+|.+
T Consensus 14 G~sv~L~~~~~~~~~~~---~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~-----~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 14 GQDINLDIPSFQMSDDI---DDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF-----KNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp TSCEEECCTTCCCCSSE---EEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC-----TTSCEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCcccccCcC---CEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC-----CCCCEEECCCChhhCEEEEEEE
Confidence 45577776443322222 2688887 432211 11111112245666665 3458999999999999999999
Q ss_pred ecCCCce---eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeec
Q psy10361 110 STTPHQA---HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDS 186 (236)
Q Consensus 110 ~~~~~~~---~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~ 186 (236)
.+..+.. ..+.|.|. .+.+.|. +.. .+.++.|.|.+.+.| .+.+.|++++..+ ...
T Consensus 86 ~n~~g~~~~~~~~~L~V~-----------~~~~~P~------i~~-~~~~v~L~C~~~~~p--~~~~~W~~~g~~l-~~~ 144 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQ-----------ERVSKPK------ISW-TCINTTLTCEVMNGT--DPELNLYQDGKHL-KLS 144 (182)
T ss_dssp EETTSCEEEEEEEEEEEE-----------CCCCCCE------EEE-ETTTTEEEEECSSCS--SCEEEEEESSCEE-EEE
T ss_pred EeCCCceeEEEEEEEEEc-----------CcCCCCE------EEE-ccCcEEEEeEccCCC--CCEEEEEECCEEC-CCC
Confidence 9876542 45567776 1111111 122 344789999998874 4599999999877 211
Q ss_pred CCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceE
Q psy10361 187 QRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSV 230 (236)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~ 230 (236)
.. .+.+.. ..+|.|.|+|.|.|.+|...
T Consensus 145 ----------~~-----~i~~~~-~~~d~G~Y~C~a~N~~~~~~ 172 (182)
T 1hnf_A 145 ----------QR-----VITHKW-TTSLSAKFKCTAGNKVSKES 172 (182)
T ss_dssp ----------SS-----CEEEEC-CSCEEEEEEEEEECSSCEEE
T ss_pred ----------Cc-----EEEEec-ccCCCcEEEEEEEeCCCCcE
Confidence 10 233322 47899999999999998543
No 126
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.66 E-value=7.9e-15 Score=111.52 Aligned_cols=157 Identities=18% Similarity=0.231 Sum_probs=93.1
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC--ceeEEEEEEEEEEeeCC-cccccCCCcccccCCCcEEEe
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH--QAHYIYLTVVVLVINDG-KYLLVPEPETDIIGGPEVFIE 152 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 152 (236)
+.|+.... ......|.|.+++.+|+|.|.|.+.+..+ ......|.|........ +......+...+..+....+.
T Consensus 70 ~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~ 147 (276)
T 3auv_A 70 PSRFSGSG--SGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQ 147 (276)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEEC
T ss_pred CCCEEEec--cCCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEec
Confidence 34555442 12456899999999999999999988643 22335666651000000 000000111223334567888
Q ss_pred cCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---ee-----------ecCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 153 NGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SY-----------DSQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~-----------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+|+++.|.|.+.+.+.+.+.+.|++++ ... .. .....++.+..+. .....+|.|.+++.+|+|
T Consensus 148 ~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~~~DsG 226 (276)
T 3auv_A 148 PGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADT-SKNTAYLQMNSLRAEDTA 226 (276)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEG-GGTEEEEEECSCCGGGCE
T ss_pred CCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecC-CCcEEEEEECCCChhHCE
Confidence 999999999999874224699999963 111 10 0112344433221 123457999999999999
Q ss_pred EEEEEeCCC--------CCceEEEEEc
Q psy10361 217 KYQCNPANS--------QAKSVMVNVL 235 (236)
Q Consensus 217 ~y~C~a~n~--------~g~~~~~~v~ 235 (236)
.|.|.|.|. .|....|.|.
T Consensus 227 ~Y~C~a~n~~~~~~~~~fg~gt~l~V~ 253 (276)
T 3auv_A 227 VYYCARFVFFLPYAMDYWGQGTLVTVS 253 (276)
T ss_dssp EEEEEEECSSTTCSCCCBCCCEEEEEC
T ss_pred EEEEEEEcCcCCcCceEECCCEEEEEc
Confidence 999999997 2445555553
No 127
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.66 E-value=2.9e-15 Score=109.93 Aligned_cols=120 Identities=18% Similarity=0.241 Sum_probs=76.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
+..+|.|.+++.+|+|.|+|.+.+.......+.|.|. .|+..+.. .....+..|+.+.|.|.+.|.|
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~-----------~~~~~~~~--~~~~~~~~g~~v~L~C~~~g~P 144 (222)
T 3sbw_C 78 GNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVN-----------APYNKINQ--RILVVDPVTSEHELTCQAEGYP 144 (222)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEESSSEEEEEEEEEEE-----------BCCCCCEE--EEEEEETTTTEEEEEEEEEEBS
T ss_pred CEEEEEEcCcccccCeEEEEEEEeCCCceeEEEEEEE-----------CCCCCCCc--eeeeeecCCCcEEEEEEecCCC
Confidence 4568999999999999999999984333456667776 22211111 1112567899999999999984
Q ss_pred CCCCeEEEeec-CeEEeeecCCCceEE-EeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHN-EAIISYDSQRGGVNV-ITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.|+++ +..+.... .... ...++ ......+..+..+|.|.|+|.|.|..|
T Consensus 145 --~p~i~W~~~~g~~~~~~~---~~~~~~~~~~--~~~~~~~l~v~~~d~g~Y~C~a~n~~g 199 (222)
T 3sbw_C 145 --KAEVIWTSSDHQVLSGKT---TTTNSKREEK--LFNVTSTLRINTTTNEIFYCTFRRLDP 199 (222)
T ss_dssp --CCEEEEEETTCCEECCEE---EEEECC------CEEEEEEEEEECCTTCEEEEEEEETTT
T ss_pred --CCeEEEEECCCceecCcc---ceEEEcCCCC--CEEEEEEEEEeccCCcEEEEEEEeCcc
Confidence 459999998 54442211 1100 01111 111222234557899999999999998
No 128
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.65 E-value=3.8e-16 Score=114.06 Aligned_cols=133 Identities=16% Similarity=0.213 Sum_probs=84.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc----eeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ----AHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 150 (236)
+.|+.... ......|.|.+++.+|+|.|+|.+.+..+. .....|.|. .+...+.+ ..+....
T Consensus 59 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~-----------~~~~~p~v~~~~~~~~ 125 (213)
T 3nl4_L 59 PSRFKGSG--SGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVK-----------GDPVAPTVLIFPPSAD 125 (213)
T ss_dssp CTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEE-----------CCCBCCEEEEECCCHH
T ss_pred CccEEEec--CCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEe-----------CCCcCCeEEEeCCchh
Confidence 34555442 225678999999999999999999886542 244566665 11111122 1122223
Q ss_pred EecCCeEEEEeEEee-CCCCCCeEEEeecCeEEeeec-CCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 151 IENGSTINLTCVVRF-SPEPPAYIFWNHNEAIISYDS-QRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~-~p~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
+..|+.+.|.|.+.+ .| .+.+.|++++..+.... .........+......+.|.|..+..+|.|.|+|.|.
T Consensus 126 ~~~g~~v~l~C~~~g~~P--~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 126 LVATGTVTIVCVANKYFP--DVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp HHTTSEEEEEEEEEEEBS--CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred hccCCcEeEEEEEecccC--CcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 446899999999988 74 56999999998774210 0000000001111233579999999999999999999
No 129
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.65 E-value=9.6e-16 Score=109.59 Aligned_cols=145 Identities=14% Similarity=0.195 Sum_probs=93.7
Q ss_pred CCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc---eeEEEE
Q psy10361 45 HKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ---AHYIYL 121 (236)
Q Consensus 45 ~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~l 121 (236)
.++.-...|.+.. +...+.|.+++.... .....|.|.+++.+|+|.|+|.+.+..+. +..+.|
T Consensus 21 ~G~~v~L~C~~~~---------~~~~~~W~k~g~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 86 (184)
T 2gi7_A 21 LEKPVTLRCQGPP---------GVDLYRLEKLSSSRY-----QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLEL 86 (184)
T ss_dssp TTCCEEEEEECST---------TCSEEEEEETTTCCE-----ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred CCCcEEEEEeCCC---------CCCEEEEEECCcccc-----CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEE
Confidence 4566666676432 112344554443311 14568999999999999999999986532 345666
Q ss_pred EEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcce
Q psy10361 122 TVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETT 201 (236)
Q Consensus 122 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (236)
.|. .+...+.+...+...+.+|+++.|.|.+.+. | +.+.|++++..+.. ..... ..
T Consensus 87 ~V~-----------~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~--~-~~~~w~k~g~~~~~---~~~~~-------~~ 142 (184)
T 2gi7_A 87 VAT-----------GVFAKPSLSAQPGPAVSSGGDVTLQCQTRYG--F-DQFALYKEGDPAPY---KNPER-------WY 142 (184)
T ss_dssp EEE-----------SSSCCCEEEEECCCSSCCTTCEEEEEECSSC--C-CEEEEEECCCCTTS---CCCCE-------EE
T ss_pred Eec-----------CcCCCCEEEeCCCceecCCCcEEEEEEcCCC--C-cEEEEEECCCcCcc---eecCC-------Cc
Confidence 665 1111222222223356689999999998654 3 49999999876532 11111 12
Q ss_pred EEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 202 VSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 202 ~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
...|.|.++..+|+|.|+|.|.|..+
T Consensus 143 ~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 143 RASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EESSSEEEETTCCSEEEEEEEECTTS
T ss_pred eEEEEEccCCccCCeEEEEEEEeCCC
Confidence 23688999999999999999999853
No 130
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.65 E-value=1.1e-15 Score=112.22 Aligned_cols=112 Identities=13% Similarity=0.140 Sum_probs=79.7
Q ss_pred EEEEcCCCCCCCEEEEEEeecCCCc---eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 91 TLQLKYPQHKDTGIYECQVSTTPHQ---AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 91 ~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
.|.|.+++.+|+|.|+|.+.+..+. +..+.|.|. .+.+.+.+...+...+.+|+++.|.|...+.
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~-----------~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~- 132 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT-----------GLYGKPFLSADRGLVLMPGENISLTCSSAHI- 132 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEE-----------CSSCCCEEEESSCSEECTTCCCEEEEECSSS-
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEc-----------CcccCCEEEeCCCCccCCCCCEEEEEeCCCC-
Confidence 8999999999999999999986532 244666665 1112233332234577899999999976555
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
|.+.+.|++++..+.. ...... ....|.|.++..+|+|.|+|.|.|.
T Consensus 133 -~~~~~~W~k~g~~~~~-----~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~n~ 179 (218)
T 1uct_A 133 -PFDRFSLAKEGELSLP-----QHQSGE-----HPANFSLGPVDLNVSGIYRCYGWYN 179 (218)
T ss_dssp -CCSEEEEEETTCSSCC-----SEEECS-----SSEEEECCSCCGGGCEEEEEEEECT
T ss_pred -CCCEEEEEECCCcccc-----cccCCC-----ccCEEEEccCCcccCEEEEEEEEcC
Confidence 4469999999876532 111111 1247999999999999999999875
No 131
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.65 E-value=4.6e-15 Score=111.61 Aligned_cols=156 Identities=18% Similarity=0.256 Sum_probs=92.4
Q ss_pred cCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-----ceeEEEEEEEEEE-------eeCCcccccCCCccc
Q psy10361 75 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-----QAHYIYLTVVVLV-------INDGKYLLVPEPETD 142 (236)
Q Consensus 75 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~~~-------~~~~~~~~~~~~~~~ 142 (236)
..+|+.+.........+|.|.+++.+|+|.|+|.+.+..+ ......|.|.... .........+.+...
T Consensus 61 ~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (256)
T 3tf7_C 61 GVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAV 140 (256)
T ss_dssp CSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCE
T ss_pred cCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEE
Confidence 3456665433444678899999999999999999988643 1234566665100 000000000111222
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeee-c--------CCCceEEEeecCcceEEEEEEc
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYD-S--------QRGGVNVITEKGETTVSYLLIQ 208 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~-~--------~~~~~~~~~~~~~~~~~~L~i~ 208 (236)
...+....+.+|+++.|.|.+.+. .+.+.|++.. .. +... . ...+...... .....+|.|.
T Consensus 141 ~~~p~~~~v~~G~~v~L~C~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~I~ 215 (256)
T 3tf7_C 141 TQSPRNKVTVTGENVTLSCRQTNS---HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRT--TQEDFFLTLE 215 (256)
T ss_dssp EESCSEEEEETTCCEEECEEECSC---CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECC--SSSBCEEEES
T ss_pred EecCCEEEEeCCCcEEEEEEcCCC---ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeC--CCCeEEEEEC
Confidence 334556778899999999999765 2489999842 11 1100 0 0112222111 1123479999
Q ss_pred ccCCCCCeEEEEEeCCCCC-----ceEEEEEc
Q psy10361 209 KARPSDNGKYQCNPANSQA-----KSVMVNVL 235 (236)
Q Consensus 209 ~v~~~d~G~y~C~a~n~~g-----~~~~~~v~ 235 (236)
+++.+|+|.|.|.|.|..| ....|.|.
T Consensus 216 ~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~ 247 (256)
T 3tf7_C 216 SASPSQTSLYFCASSDAPGQLYFGEGSKLTVL 247 (256)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCHHHCEEEEEEecCCCCccEECCCeEEEEE
Confidence 9999999999999998854 55555554
No 132
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.1e-14 Score=108.35 Aligned_cols=146 Identities=18% Similarity=0.292 Sum_probs=94.6
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC--ceeEEEEEEEEEEeeCCcccccC---CCcccccCCCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH--QAHYIYLTVVVLVINDGKYLLVP---EPETDIIGGPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 151 (236)
.|+.... ......|.|.+++.+|+|.|+|.+.+..+ ......|.|. ..+ .+...+..+....+
T Consensus 64 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~~~v 131 (240)
T 1moe_A 64 VRFSGTG--SRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIK----------GGGSGGGGEVQLQQSGAELV 131 (240)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC----------CCSCCCCCCCEEEECCCEEE
T ss_pred ccEEEEe--cCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEe----------cCCCCCCceEEEeCCCceEE
Confidence 4555543 22456899999999999999999988753 2344567776 111 11222333556778
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEe---eec-----------CCCceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHN--EAIIS---YDS-----------QRGGVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~---~~~-----------~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
.+|+++.|.|.+.+.|.|.+.+.|+++ +..+. ... ...++....+ ......+|.|.+++.+|+
T Consensus 132 ~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D~ 210 (240)
T 1moe_A 132 EPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITAD-TSSNTAYLQLTSLTSEDT 210 (240)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGGC
T ss_pred eCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEc-ccCCEEEEEECcCCHHHC
Confidence 899999999999988544468999995 22110 000 1123333222 112346799999999999
Q ss_pred eEEEEEeCC-----C----CCceEEEEEc
Q psy10361 216 GKYQCNPAN-----S----QAKSVMVNVL 235 (236)
Q Consensus 216 G~y~C~a~n-----~----~g~~~~~~v~ 235 (236)
|.|.|.|.+ . .|....|.|.
T Consensus 211 G~Y~C~a~~~~~~~~~~~~fg~gt~l~V~ 239 (240)
T 1moe_A 211 AVYYCAPFGYYVSDYAMAYWGQGTSVTVS 239 (240)
T ss_dssp EEEEEEECSTTSCTTSCCCCCCCEEEEEC
T ss_pred EEEEEEEEecCCCCcCeEEECCCeEEEeC
Confidence 999999983 2 3556666653
No 133
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.9e-15 Score=113.74 Aligned_cols=149 Identities=17% Similarity=0.218 Sum_probs=92.1
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-------c---eeEEEEEEEEEEeeCCcccc----c--CCC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-------Q---AHYIYLTVVVLVINDGKYLL----V--PEP 139 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-------~---~~~~~l~v~~~~~~~~~~~~----~--~~~ 139 (236)
..|+.+..........|.|.+++.+|+|.|+|.+.+..+ . .....|.|. ..+... . ...
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~-----~~~~~~~~~~~~~~~~ 138 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVS-----SGGGGSGGGGSGGGGS 138 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEEC-----SSCCSSCCSSSCCCCC
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEE-----eCCccccccccCCCcc
Confidence 356666543334567999999999999999999988742 1 123456665 100000 0 001
Q ss_pred ccccc-CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEee--cCeEEe---ee------cCCCceEEEeecCcceEEEEEE
Q psy10361 140 ETDII-GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNH--NEAIIS---YD------SQRGGVNVITEKGETTVSYLLI 207 (236)
Q Consensus 140 ~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~--~~~~~~---~~------~~~~~~~~~~~~~~~~~~~L~i 207 (236)
.+.+. .+....+.+|+++.|.|.+.+.| .+.+.|++ ++..+. .. ....+....... ...+|.|
T Consensus 139 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I 213 (257)
T 1f3r_B 139 DIKLTQSPSLLSASVGDRVTLSCKGSQNI--NNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSG---TDYTLTI 213 (257)
T ss_dssp EECSCEETSEECCCTTCCEEEEEECSSCC--BTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEB---TEEEEEE
T ss_pred ceEEEccCCEEEEcCCCCEEEEEEECCcC--CCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCC---CEEEEEE
Confidence 12222 24456678999999999998874 35899999 443321 10 001233322111 3357999
Q ss_pred cccCCCCCeEEEEEeCCCC---CceEEEEE
Q psy10361 208 QKARPSDNGKYQCNPANSQ---AKSVMVNV 234 (236)
Q Consensus 208 ~~v~~~d~G~y~C~a~n~~---g~~~~~~v 234 (236)
.++..+|+|.|.|.|.|.. |....|.|
T Consensus 214 ~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V 243 (257)
T 1f3r_B 214 SSLQPEDVATYFCYQYNNGYTFGAGTKLEL 243 (257)
T ss_dssp CSCCGGGCSEEEEEEESSSEEECCCCEECC
T ss_pred CCCChhhCEEEEEEEeCCCCeECCCEEEEE
Confidence 9999999999999999963 44444444
No 134
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.65 E-value=1.9e-15 Score=109.10 Aligned_cols=128 Identities=21% Similarity=0.342 Sum_probs=85.9
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce----eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA----HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
...|.|.+++.+|+|.|+|.+.+..... ....+.+.. .... .+.++..........+..|+++.|.|.+.
T Consensus 65 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 138 (201)
T 3s97_C 65 NGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIP---ERTT---KPYPADIVVQFKDVYALMGQNVTLECFAL 138 (201)
T ss_dssp TCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEEC---CSSC---CCEEEEEEEECCCEEEETTCCEEEEEEEE
T ss_pred CCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeecc---cccc---CCCCCceEecCCceEEecCCcEEEEEEcc
Confidence 4579999999999999999998855322 222333320 0000 00011111223367788999999999999
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEE
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v 234 (236)
+. |.+.+.|++++..+.. ......... .|.|.++..+|.|.|+|.|.|..| .++.|.|
T Consensus 139 g~--p~p~v~W~~~~~~~~~-----~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 199 (201)
T 3s97_C 139 GN--PVPDIRWRKVLEPMPS-----TAEISTSGA-----VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYV 199 (201)
T ss_dssp EE--SCCEEEEEETTBCCCT-----TCEEETTTT-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CC--CCCceEEEeCCCcCCC-----ceeecCCCC-----EEEEccCChhhCEEEEEEEEecCCceeeeEEEEE
Confidence 98 4459999999886532 122222332 799999999999999999999998 3444544
No 135
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.64 E-value=9e-16 Score=108.10 Aligned_cols=141 Identities=18% Similarity=0.253 Sum_probs=95.1
Q ss_pred CCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEE
Q psy10361 45 HKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVV 124 (236)
Q Consensus 45 ~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~ 124 (236)
.++.-...|.+.... ....+.|.+++..... ....+.|.+++.+|+|.|+|.+.+... +..+.|.|.
T Consensus 18 ~G~~v~l~C~~~~~p-------~~~~~~W~~~g~~~~~-----~~~~~~~~~~~~~d~G~Y~C~~~~~~~-s~~~~l~v~ 84 (170)
T 3ry4_A 18 QEDSVTLTCQGARSP-------ESDSIQWFHNGNLIPT-----HTQPSYRFKANNNDSGEYTCQTGQTSL-SDPVHLTVL 84 (170)
T ss_dssp TTCEEEEEEESCCCS-------SSSCEEEEETTEECTT-----CCSSEEEEECCGGGCEEEEEEETTSBC-CCCEEEEEE
T ss_pred CCCcEEEEEEecCCC-------CcceEEEEECCeEccc-----CccceEEEecccccCeEEEEEEeCCCc-eEeEEEEEE
Confidence 455566667655321 1123455555533211 233467889999999999999987532 344677777
Q ss_pred EEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEE
Q psy10361 125 VLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSY 204 (236)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (236)
.+. .+...+...+.+|+++.|.|.+.+.+ |.+.+.|++++..+.... .. ..
T Consensus 85 -------------~~~-~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~~~~~~---------~~-----~~ 135 (170)
T 3ry4_A 85 -------------FEW-LVLQTPHLEFQEGETIMLRCHSWKDK-PLVKVTFFQNGKSQKFSH---------LD-----PT 135 (170)
T ss_dssp -------------CCS-EEEECSCSEECTTCCEEEEEEEGGGC-CEEEEEEEETTEEEEEES---------SC-----CE
T ss_pred -------------CCc-eEecCCCceeecCCeEEEEEECCCCC-CCceEEEEECCeEccccC---------CC-----Ce
Confidence 221 22223445678899999999995432 446999999998775321 11 26
Q ss_pred EEEcccCCCCCeEEEEEeCCCCC
Q psy10361 205 LLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 205 L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.|.++..+|.|.|+|.|.|..|
T Consensus 136 L~i~~v~~~d~G~Y~C~a~n~~g 158 (170)
T 3ry4_A 136 FSIPQANHSHSGDYHCTGNIGYT 158 (170)
T ss_dssp EEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEeccccCCEEEEEEEEeCcC
Confidence 99999999999999999999997
No 136
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.64 E-value=5.5e-15 Score=111.13 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=94.4
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecC------------CC-ceeEEEEEEEEEEeeCCcccccC------
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTT------------PH-QAHYIYLTVVVLVINDGKYLLVP------ 137 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~------------~~-~~~~~~l~v~~~~~~~~~~~~~~------ 137 (236)
+|+.+..........|.|.+++.+|+|.|.|.+.+. .. ......|.|.. .+....+
T Consensus 72 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~~~~~~~~~ 146 (256)
T 3juy_B 72 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSS-----GGGGSGGGGSGGG 146 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECS-----CC----------C
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecC-----CcccccccccCCC
Confidence 567766444445678999999999999999999886 11 22445666651 0000000
Q ss_pred -CCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEe---ee------cCCCceEEEeecCcceEEEE
Q psy10361 138 -EPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAIIS---YD------SQRGGVNVITEKGETTVSYL 205 (236)
Q Consensus 138 -~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~---~~------~~~~~~~~~~~~~~~~~~~L 205 (236)
.+...+..+....+.+|+++.|.|.+.+.+. .+.+.|++. +..+. .. ....+....... ...+|
T Consensus 147 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L 222 (256)
T 3juy_B 147 GSEIVLTQAPGTLSLSPGERATFSCRSSHSIR-SRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG---TDFTL 222 (256)
T ss_dssp CCCCCEEEECSEEEECTTSCEEEEEEESSCCT-TCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEE
T ss_pred cceeEEEecCCeEEEeCCCCEEEEEEECCCcC-CeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccC---CEEEE
Confidence 0122334456778899999999999988642 259999983 22111 10 011233322222 34579
Q ss_pred EEcccCCCCCeEEEEEeCCCC----CceEEEEE
Q psy10361 206 LIQKARPSDNGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 206 ~i~~v~~~d~G~y~C~a~n~~----g~~~~~~v 234 (236)
.|.++..+|+|.|.|.|.|.. |....|.|
T Consensus 223 ~I~~v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 223 TITRVEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp EESSCCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred EECCCCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 999999999999999999965 45555655
No 137
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.64 E-value=2.2e-14 Score=106.98 Aligned_cols=156 Identities=18% Similarity=0.247 Sum_probs=91.8
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEec
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIEN 153 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (236)
..|+.... ......|.|.+++.+|+|.|.|.+.+.... .....|.|.............+.....+..+....+.+
T Consensus 59 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 136 (242)
T 2znx_A 59 PSRFSGSG--SGTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKP 136 (242)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECT
T ss_pred CCCEEEec--CCCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecC
Confidence 34665542 124578999999999999999999886432 23456666510000000000000111222233345889
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecC--eEEe---eec----------CCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNE--AIIS---YDS----------QRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~---~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
|+++.|.|.+.+.|.+.+.+.|+++. ..+. ... ...+..+..+ ......+|.|.+++.+|+|.|
T Consensus 137 G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D~G~Y 215 (242)
T 2znx_A 137 SQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRD-TSKNQYYLDLNSVTTEDTATY 215 (242)
T ss_dssp TSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEE-TTTTEEEEEECSCCGGGCEEE
T ss_pred CCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEec-CCCCEEEEEECCCCcCcCEEE
Confidence 99999999999875334589999852 2221 100 1223333222 112345899999999999999
Q ss_pred EEEeCCC--CCceEEEEE
Q psy10361 219 QCNPANS--QAKSVMVNV 234 (236)
Q Consensus 219 ~C~a~n~--~g~~~~~~v 234 (236)
.|.|.|. .|....|.|
T Consensus 216 ~C~a~~~~~fG~gt~l~v 233 (242)
T 2znx_A 216 YCANXDGDYXGQGTLVTV 233 (242)
T ss_dssp EEEETTSSCBCCCEEEEE
T ss_pred EEeccCCcccCCCeEEEE
Confidence 9999995 465555544
No 138
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.64 E-value=3.3e-14 Score=106.87 Aligned_cols=154 Identities=17% Similarity=0.160 Sum_probs=92.6
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC----C-ceeEEEEEEEEEEeeC-CcccccCCCcccccCCCcEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP----H-QAHYIYLTVVVLVIND-GKYLLVPEPETDIIGGPEVF 150 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~----~-~~~~~~l~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 150 (236)
.|+.+.........+|.|.+++.+|+|.|+|.+.+.. . ......|.|....... .+.............+....
T Consensus 73 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 152 (257)
T 3gkz_A 73 SRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMS 152 (257)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEE
T ss_pred ccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEE
Confidence 4666554333356789999999999999999998862 1 1234556665100000 00000001112223345678
Q ss_pred EecCCeEEEEeEEeeCCCCCC-eEEEeec--CeEEe---ee------cCCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 151 IENGSTINLTCVVRFSPEPPA-YIFWNHN--EAIIS---YD------SQRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~p~p~~-~v~W~~~--~~~~~---~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
+.+|+++.|.|.+.+. |.+ .+.|++. +..+. .. ....+....... ...+|.|.+++.+|+|.|
T Consensus 153 v~~G~~v~L~C~~~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D~G~Y 227 (257)
T 3gkz_A 153 ASPGEKVTLTCSASSS--VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSG---TSYSLTISSMEAEDAASY 227 (257)
T ss_dssp ECTTCCEEEEEEESSC--CCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGGCEEE
T ss_pred EeCCCcEEEEEEEccC--ccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCC---CEEEEEECCCChHHCEEE
Confidence 8999999999999886 434 8999983 22111 00 001233322211 345799999999999999
Q ss_pred EEEeCCCC----CceEEEEEc
Q psy10361 219 QCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 219 ~C~a~n~~----g~~~~~~v~ 235 (236)
.|.|.+.. |....|.|.
T Consensus 228 ~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 228 FCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp EEEECSSSSCEECCCEEEEEC
T ss_pred EEEEccCCceEEcCCEEEEEE
Confidence 99999854 566666654
No 139
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.64 E-value=7.5e-15 Score=119.03 Aligned_cols=171 Identities=10% Similarity=0.127 Sum_probs=107.2
Q ss_pred CceEEEEcCCCCCCCeeEEEEEEEEec-------------cee----------------EEe------cce---eeEEec
Q psy10361 34 DDWTLQLKYPQHKDTGIYECQVSFVRH-------------RDI----------------HLL------TTG---RYTYTN 75 (236)
Q Consensus 34 ~~~~L~i~~~~~~D~G~Y~C~v~~~~~-------------~~~----------------~~~------~~~---~~~~~~ 75 (236)
...+|.|.+++. |+| |.|.+.+... +.. .+. +.. .+.|.+
T Consensus 48 ~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k 125 (450)
T 1z7z_I 48 NRKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR 125 (450)
T ss_dssp TEEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE
T ss_pred CceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEee
Confidence 446899999988 999 9998864210 000 000 112 567777
Q ss_pred CCcEEEEcC--CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce---------eEEEEEEEEEEeeCCcccccCCCccccc
Q psy10361 76 DQRFRVINN--PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA---------HYIYLTVVVLVINDGKYLLVPEPETDII 144 (236)
Q Consensus 76 ~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---------~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 144 (236)
++....... .......|.|.+++.+|+|.|+|.+.|..+.. ....+.|. ..|...+.+.
T Consensus 126 ~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~----------~~~~~~p~~~ 195 (450)
T 1z7z_I 126 GEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTF----------VLPATPPQLV 195 (450)
T ss_dssp TTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEEC----------CCCSSCCEEE
T ss_pred CCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeee----------ccCCCCCEec
Confidence 765443221 12234689999999999999999999875421 22233333 1111111221
Q ss_pred CCCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe--EEEEE
Q psy10361 145 GGPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG--KYQCN 221 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G--~y~C~ 221 (236)
. ...+.+|+.+.|.|.+.+. |.+.+.+.|++++..+.. +... ... .....+.+ ++..+|.| .|+|.
T Consensus 196 ~--~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~-----~~~~--~~~-~~~~~~~~-~v~~~d~G~~~Y~C~ 264 (450)
T 1z7z_I 196 S--PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-----TVTY--GND-SFSAKASV-SVTAEDEGTQRLTCA 264 (450)
T ss_dssp C--CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC-----EEEE--ETT-EEEEEEEE-ECCGGGCEEEEEEEE
T ss_pred C--ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc-----eEEe--cCC-ceeEEEEE-EeEhhhCCcEEEEEE
Confidence 1 1578899999999999987 533569999999987642 1111 111 11112222 77899999 99999
Q ss_pred eCCCCC
Q psy10361 222 PANSQA 227 (236)
Q Consensus 222 a~n~~g 227 (236)
|.|..|
T Consensus 265 a~n~~g 270 (450)
T 1z7z_I 265 VILGNQ 270 (450)
T ss_dssp EEETTE
T ss_pred EccCCc
Confidence 999987
No 140
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.64 E-value=4.8e-16 Score=113.54 Aligned_cols=138 Identities=16% Similarity=0.156 Sum_probs=86.1
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC--ceeEEEEEEEEEEeeCCcccccCCCcccc-cCCCcEEEe
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH--QAHYIYLTVVVLVINDGKYLLVPEPETDI-IGGPEVFIE 152 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (236)
..|+.... ......|.|.+++.+|+|.|+|.+.+..+ ......|.|. .+...+.+ ..+....+.
T Consensus 59 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~p~v~~~~~~~~~~ 125 (213)
T 3r06_A 59 PSRFSGSG--SGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIK-----------RADAKPTVSIFPPSSEQL 125 (213)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-----------CCCBCCEEEEECCCHHHH
T ss_pred CCcEEEec--cCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEe-----------ccCCCceeeeeCCCceec
Confidence 34555442 22567899999999999999999988643 2244556663 11111121 112222234
Q ss_pred cCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeec-CCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 153 NGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDS-QRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|+.+.|.|.+.+.+.|.+.+.|++++..+.... ...... ...++ ....+.|.|.....+|.|.|+|.|.|...
T Consensus 126 ~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~-~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 126 GTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQ-DSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCC-CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCce-eCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 5788999999988642245899999998874210 000000 01111 22345788888888899999999999873
No 141
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.64 E-value=1.2e-14 Score=109.28 Aligned_cols=146 Identities=17% Similarity=0.226 Sum_probs=87.6
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC----ceeEEEEEEEEEEeeCC--cccc-----cCCCcccccC
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH----QAHYIYLTVVVLVINDG--KYLL-----VPEPETDIIG 145 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~l~v~~~~~~~~--~~~~-----~~~~~~~~~~ 145 (236)
.|+..... .....|.|.+++.+|+|.|+|.+.+..+ ......|.|........ +... .....+.+..
T Consensus 63 ~r~~~~~~--~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T 3ux9_B 63 DRFSGSKS--GTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE 140 (256)
T ss_dssp TTEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE
T ss_pred CcEEEEcc--CCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc
Confidence 45554322 2456899999999999999999988542 12345666652100000 0000 0000112333
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEee---e-----------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAIISY---D-----------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+....+.+|+++.|.|.+.+.+.+.+.+.|+++ +..+.. . ...++.....+. .....+|.|.+
T Consensus 141 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~ 219 (256)
T 3ux9_B 141 SGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDN-SKNTLYLQMNS 219 (256)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEET-TTTEEEEEECS
T ss_pred CCCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecC-CCCEEEEEECC
Confidence 445568899999999999887433569999986 322210 0 011234433222 22445799999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.|.|.
T Consensus 220 v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 220 LRAEDTAVYYCARYID 235 (256)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CChhhCEEEEEEEEcC
Confidence 9999999999999996
No 142
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.64 E-value=8.1e-15 Score=119.79 Aligned_cols=129 Identities=11% Similarity=0.107 Sum_probs=80.7
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
..|.|.+++.+|+|.|+|.+.+..+.. ....+.+.. ... ++...+..+....+..|+.+.|.|.+.+.+.
T Consensus 309 ~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~--------~~~-~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P 379 (475)
T 1iga_A 309 SVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSG--------NTF-RPEVHLLPPPSEELALNELVTLTCLARGFSP 379 (475)
T ss_pred EEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCC--------CCC-CCeEEEECCChHHhccCCceEEEEEEeeeEC
Confidence 469999999999999999999876543 222332210 001 1211222222233567999999999988632
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEe---ecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVIT---EKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+.+.+.|+++|..+............. .++ ....+.|.|.....+|.|.|+|.|.|...
T Consensus 380 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l 442 (475)
T 1iga_A 380 KDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 442 (475)
T ss_pred CCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCC
Confidence 345999999998875321000000111 121 23446788888888899999999999863
No 143
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.64 E-value=2e-15 Score=110.98 Aligned_cols=146 Identities=12% Similarity=0.141 Sum_probs=92.7
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc----eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ----AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFI 151 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+.... .....|.|. ..+...|.+.......+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~v~~~~~~~~ 134 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVS----------AESARNPTIYPLTLPPA 134 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEEC----------SSCCBCCEEEEECCCSS
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEec----------CCCCCCCEEEEeecccc
Confidence 3577766543345679999999999999999999886432 233566665 11111122211111224
Q ss_pred ecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceE
Q psy10361 152 ENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSV 230 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~ 230 (236)
..|+.+.|.|.+.+. |.+.+.+.|++++..+..... ......+......+.|.|.....+|.|.|+|.|.|..+..-
T Consensus 135 ~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~--~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 135 LSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNF--PPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEEC--CCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEec--CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 578999999999876 431369999999865421111 11111112223345799999988999999999999998654
Q ss_pred EEE
Q psy10361 231 MVN 233 (236)
Q Consensus 231 ~~~ 233 (236)
.+.
T Consensus 213 ~~~ 215 (220)
T 2fbj_H 213 ELD 215 (220)
T ss_dssp EEE
T ss_pred cCC
Confidence 443
No 144
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.64 E-value=1e-14 Score=111.35 Aligned_cols=117 Identities=20% Similarity=0.286 Sum_probs=84.1
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .+......+....+.+|+.+.|.|.+.+.
T Consensus 59 ~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~-------------~~~~~~~~~~~~~v~~G~~v~l~C~~~~~ 125 (291)
T 2wim_A 59 RSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIY-------------QKLTFREVVSPQEFKQGEDAEVVCRVSSS 125 (291)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEE-------------CCCBCCSCCCSEEEETTSCEEECCCCBCS
T ss_pred EEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEec-------------CCcceEeCCCChhhcCCCCEEEEEEEccC
Confidence 4689999999999999999999876554 44555555 22222333456778899999999999988
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.|++++..+... ...+.... .++ .|.|.++..+|.|.|+|.+.|..+
T Consensus 126 --p~~~v~W~~~~~~~~~~-~~~~~~~~-~~~-----~L~i~~v~~~d~G~Y~C~~~n~~~ 177 (291)
T 2wim_A 126 --PAPAVSWLYHNEEVTTI-SDNRFAML-ANN-----NLQILNINKSDEGIYRCEGRVEAR 177 (291)
T ss_dssp --SCCEEEEECC----CBC-CCSSEEEC-TTS-----CEEETTCCGGGCEEEEEEEEETTT
T ss_pred --CCCEEEEEECCcccccc-CCceEEEc-cCC-----CEEEEecchhhCEEEEEEEEECCC
Confidence 44599999998876532 12233322 222 699999999999999999999875
No 145
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.63 E-value=5.8e-15 Score=106.36 Aligned_cols=111 Identities=20% Similarity=0.306 Sum_probs=76.0
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCC-eEEEEeEEeeC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGS-TINLTCVVRFS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~~ 166 (236)
+++|.|.+++.+|+|.|.|.+.+..+. ...+.|.|. .+...+.+..... ....|. ++.|.|.+.+.
T Consensus 69 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~-----------~~~~~p~i~~~~~-~~~~g~~~v~L~C~~~g~ 136 (193)
T 2if7_A 69 SYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRIL-----------RQLRNIQVTNHSQ-LFQNMTCELHLTCSVEDA 136 (193)
T ss_dssp TCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE-----------CCCEEEEEEECCC----CSSEEEEEEEEEESC
T ss_pred CeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEE-----------ccCCCCeEecCce-eecCCCceEEEEEEEecC
Confidence 578999999999999999999887654 355667776 2222223322221 233465 89999999985
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCC-CCeEEEEEeCCCCCce
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPS-DNGKYQCNPANSQAKS 229 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~-d~G~y~C~a~n~~g~~ 229 (236)
+ |.+.+.|++++..+.. . ..|.|.....+ |.|.|+|.|.|.+|..
T Consensus 137 ~-p~p~i~W~~~g~~l~~------------~-----~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 137 D-DNVSFRWEALGNTLSS------------Q-----PNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp C-TTCEEEEEETTEEEES------------S-----SEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred C-CceEEEEEeCCEEcCC------------C-----CeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 3 4569999999876531 1 13666544444 8999999999999843
No 146
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.63 E-value=1.1e-15 Score=113.42 Aligned_cols=137 Identities=20% Similarity=0.233 Sum_probs=86.9
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEe
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIE 152 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 152 (236)
+.|+.... .....+|.|.+++.+|+|.|+|.+.+..+. .....+.|. .+...+.+. .+....+.
T Consensus 82 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~p~v~~~~~~~~~~ 148 (237)
T 3sob_L 82 PSRFSGSG--SGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIK-----------RTVAAPSVFIFPPSDEQL 148 (237)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE-----------CCCBCCEEEEECCCHHHH
T ss_pred CCcEEEEc--CCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEe-----------cCCCCCceEEeCCChhhc
Confidence 34555442 225678999999999999999999876532 244566665 111112221 12212223
Q ss_pred cCCeEEEEeEEeeCCCC-CCeEEEeecCeEEeeec-CCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 153 NGSTINLTCVVRFSPEP-PAYIFWNHNEAIISYDS-QRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p-~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|+++.|.|.+.+.+ | .+.+.|++++..+.... ...... ...++ ....+.|.|.....+|.|.|+|.|.|...
T Consensus 149 ~g~~v~l~C~~~~~~-p~~~~v~W~k~g~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 224 (237)
T 3sob_L 149 KSGTASVVCLLNNFY-PREAKVQWKVDNALQSGNSQESVTEQ-DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 224 (237)
T ss_dssp HHTEEEEEEEEEEEB-SSCCEEEEEETTEECCSSEEEEECCC-CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred cCCceEEEEEEcccC-CCceEEEEEECCCCCCCceeeccccc-ccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCC
Confidence 578899999998853 3 46999999998774210 000000 01111 12346788999999999999999999974
No 147
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.63 E-value=1.2e-14 Score=109.66 Aligned_cols=139 Identities=21% Similarity=0.383 Sum_probs=88.3
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc---eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEec
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ---AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIEN 153 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (236)
.|+.+.......+..|.|.+++.+|+|.|+|.+.+.... ...+.|.|. +. .+....+..
T Consensus 71 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~-------------~~-----~p~~~~v~~ 132 (268)
T 3mj6_A 71 NRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL-------------PE-----EPRDLRVRV 132 (268)
T ss_dssp TTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE-------------CC-----CCSEEEEET
T ss_pred CceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe-------------cc-----CCCcccccc
Confidence 455554433345678999999999999999999886432 233444443 11 233577889
Q ss_pred CCeEEEEeEEeeC-CCCCCeEEEeecCeE-------Eeee----------cC--CCceEEEeecCcceEEEEEEcccCCC
Q psy10361 154 GSTINLTCVVRFS-PEPPAYIFWNHNEAI-------ISYD----------SQ--RGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 154 g~~~~l~C~~~~~-p~p~~~v~W~~~~~~-------~~~~----------~~--~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
|+++.|.|.+.+. +.|.+.+.|++++.. +... .. ..++.+. .+......+|.|.++..+
T Consensus 133 G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~~~L~i~~v~~~ 211 (268)
T 3mj6_A 133 GDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLT-GDISRNDGSIKLQTVKES 211 (268)
T ss_dssp TCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEEC-SCGGGTBCCEEECSCCGG
T ss_pred CCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEee-ccCCCCeEEEEECcCChh
Confidence 9999999999432 225569999984211 1000 00 0111111 000112347999999999
Q ss_pred CCeEEEEEeCCCCC---ceEEEEE
Q psy10361 214 DNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 214 d~G~y~C~a~n~~g---~~~~~~v 234 (236)
|+|.|+|.|.|..| .++.|.|
T Consensus 212 D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 212 DQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred hCeEEEEEEEcCCceEEEEEEEEE
Confidence 99999999999887 3445554
No 148
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=1.5e-14 Score=110.31 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=93.3
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC------ceeEEEEEEEEEEeeCC--cccccCCCcccccCCCc
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH------QAHYIYLTVVVLVINDG--KYLLVPEPETDIIGGPE 148 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~~~~~~--~~~~~~~~~~~~~~~~~ 148 (236)
.|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|........ +......+......+..
T Consensus 92 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~ 171 (282)
T 1qok_A 92 GKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAI 171 (282)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSE
T ss_pred CcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCE
Confidence 56665543333467899999999999999999988753 11334677761000000 00000001112223446
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEee--cCeEEee---e------cCCCceEEEeecCcceEEEEEEcccCCCCCeE
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNH--NEAIISY---D------SQRGGVNVITEKGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~--~~~~~~~---~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 217 (236)
..+.+|+++.|.|.+.+.+ +.+.|++ ++..+.. . ....+....... ...+|.|.++..+|+|.
T Consensus 172 ~~v~~G~~v~L~C~~~~~~---~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~DsG~ 245 (282)
T 1qok_A 172 MSASPGEKVTITCSASSSV---SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSG---TSYSLTISRMEAEDAAT 245 (282)
T ss_dssp EEECTTCCEEEEEEESSCC---SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGGCEE
T ss_pred EEEcCCCcEEEEEEecCCC---ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCC---CEEEEEEccCChhHCEE
Confidence 6789999999999998884 4999999 4443211 0 011233322111 34579999999999999
Q ss_pred EEEEeCCCC----CceEEEEEc
Q psy10361 218 YQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 218 y~C~a~n~~----g~~~~~~v~ 235 (236)
|.|.|.|.. |....|.|.
T Consensus 246 Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 246 YYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp EEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEeeCCCceEeCCEEEEEe
Confidence 999999853 455566553
No 149
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.62 E-value=2e-14 Score=105.67 Aligned_cols=145 Identities=15% Similarity=0.204 Sum_probs=92.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC---CceeEEEEEEEEEEeeCCcccccCCCccccc--CCCcEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP---HQAHYIYLTVVVLVINDGKYLLVPEPETDII--GGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 150 (236)
.+|+.+.........+|.|.+++.+|+|.|.|.+.+.. .......|.|. ..+...+.+. .+...
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~----------~~~~~~p~v~~~~~~~~- 135 (221)
T 3m8o_H 67 RGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVS----------SASPTSPKVFPLSLCST- 135 (221)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEEC----------SCCCBCCEEEEEECCSC-
T ss_pred cccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEe----------cCCCCCCeEEEecCccc-
Confidence 35676654333356789999999999999999998753 12344566665 1111122221 12222
Q ss_pred EecCCeEEEEeEEee-CCCCCCeEEEeecCeEEeeecCCCceEE-EeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 151 IENGSTINLTCVVRF-SPEPPAYIFWNHNEAIISYDSQRGGVNV-ITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~-~p~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
..|+.+.|.|.+.+ .|..++.+.|++++..+...... ... ..+......+.|.|.....+|.|.|+|.|.|..+.
T Consensus 136 -~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 136 -QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFP--PSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp -CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECC--CEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred -ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcC--ceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCC
Confidence 67999999999988 54213589999988765321111 010 01122233457999999999999999999999886
Q ss_pred eEEEEE
Q psy10361 229 SVMVNV 234 (236)
Q Consensus 229 ~~~~~v 234 (236)
...+.|
T Consensus 213 ~~~~~v 218 (221)
T 3m8o_H 213 SQDVTV 218 (221)
T ss_dssp CEEEEE
T ss_pred ceeeec
Confidence 555443
No 150
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.62 E-value=2.1e-14 Score=103.81 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=77.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc------eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ------AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTC 161 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C 161 (236)
...+|.|.+++.+|+|.|+|.+.+..+. ...+.|.|. .+.+.+.+. ......|+.+.|.|
T Consensus 63 ~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~-----------~~~~~p~~~---~~~~~~g~~~~l~C 128 (201)
T 1dr9_A 63 NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVK-----------ADFPTPSIS---DFEIPTSNIRRIIC 128 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEE-----------CCCCCCEEE---EEECSSTTEEEEEE
T ss_pred CCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEc-----------CCCCCCceE---eccCCCCCeEEEEE
Confidence 4568999999999999999999986532 234555555 111111111 01124588999999
Q ss_pred EEe-eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceE
Q psy10361 162 VVR-FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSV 230 (236)
Q Consensus 162 ~~~-~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~ 230 (236)
.+. +.| .+.+.|++++..+... .........+. ......+..+..+|.|.|+|.|.|..|...
T Consensus 129 ~~~~g~P--~p~i~W~k~g~~l~~~---~~~~~~~~~~~-~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s 192 (201)
T 1dr9_A 129 STSGGFP--EPHLSWLENGEELNAI---NTTVSQDPETE-LYAVSSKLDFNMTTNHSFMCLIKYGHLRVN 192 (201)
T ss_dssp EEEEESS--CEEEEEEESSCEECCS---EEEEEECTTTC-CEEEEEEEEEETTSCEEEEEEEEETTCCEE
T ss_pred ecCCccC--CCEEEEEECCEECccc---cceEEecCCCc-EEEEEEEEEEEecCCCEEEEEEecCcceee
Confidence 995 884 4599999999877531 11111111211 111222345566899999999999998543
No 151
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.62 E-value=1.2e-15 Score=111.65 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=84.9
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccccCCCcccc--cCCCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLLVPEPETDI--IGGPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 151 (236)
.|+.... ......|.|.+++.+|+|.|.|.+.+..+ ......|.|. .+...+.+ ..+.. ..
T Consensus 61 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~-----------~~~~~P~v~~~~~~~-~~ 126 (216)
T 2xzc_L 61 DRFSGSK--SGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIK-----------RTVAAPSVFIFPPSD-EQ 126 (216)
T ss_dssp TTEEEEE--ETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEEC-----------CCCBCCEEEEECCCH-HH
T ss_pred CceEEec--cCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEc-----------CCCCCCceEEeCCCh-hh
Confidence 4555442 22466899999999999999999998764 1233455554 11111111 11211 12
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-cCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-SQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|+.+.|.|.+.+.+.++..+.|++++..+... ....... ...++ ....+.|.|..+..+|.|.|+|.|.|...
T Consensus 127 ~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (216)
T 2xzc_L 127 LKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ-DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 203 (216)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCC-CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred ccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcc-cCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCC
Confidence 3588999999998843122489999999876431 0000000 01111 22445799999999999999999999874
No 152
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.61 E-value=4.7e-15 Score=95.17 Aligned_cols=84 Identities=17% Similarity=0.376 Sum_probs=64.5
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.|.| .+.+.|++++..+... ...++...... ..++|.|.++..+|+|.|+|.|.|
T Consensus 11 ~p~~~~v~~G~~~~l~C~~~g~P--~p~v~W~k~g~~i~~~-~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 11 LPSDISIDEGKVLTVACAFTGEP--TPEVTWSCGGRKIHSQ-EQGRFHIENTD---DLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEES--CCEEEEEETTEECCTT-GGGTEEEEECS---SEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCcEEEeCCCeEEEEEEEEEec--CCEEEEEECceEeeee-ccceeeeeccc---ceEEEEEcCCCccCCEEEEEEEEE
Confidence 35578899999999999999995 4599999999988542 22344443333 346899999999999999999999
Q ss_pred CCC---ceEEEEE
Q psy10361 225 SQA---KSVMVNV 234 (236)
Q Consensus 225 ~~g---~~~~~~v 234 (236)
..| .++.|.|
T Consensus 85 ~~G~~~~~~~l~V 97 (100)
T 3knb_A 85 EFGSDSATVNIHI 97 (100)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE
Confidence 998 3344554
No 153
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.61 E-value=3.6e-15 Score=109.19 Aligned_cols=123 Identities=24% Similarity=0.276 Sum_probs=77.1
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
.+.+|.|.+++.+|+|.|+|.+.+..+.. ....+.+. . +......+.......++.+.+.|.+.+
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~c~~~~ 147 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI-----------A--QPENHAEAQEVTIGPQSVAVARCVSTG 147 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-----------B--CCEEEEEECCBCCSSSCEEEEEEEEEE
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeee-----------c--CCceeecccceeecceeeeeeeeeecC
Confidence 45689999999999999999998865543 22333333 1 111111122233445666777776644
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+ |++.+.|++++..+.... ......+......+.|.|.++..+|+|.|+|.|.|..+
T Consensus 148 ~~-P~~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~ 205 (225)
T 4fmk_A 148 GR-PPARITWISSLGGEAKDT---QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESF 205 (225)
T ss_dssp EB-SCCEEEEECSSCCEEEEE---EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred CC-CCCEEEEEECCccccCCc---ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCC
Confidence 32 556999998875543211 00001111122345799999999999999999999986
No 154
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.61 E-value=1.9e-15 Score=110.36 Aligned_cols=127 Identities=21% Similarity=0.266 Sum_probs=84.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc-----eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ-----AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (236)
.+|+.+.........+|.|.+++.+|+|.|.|.+.+.... ...+.|.|. .+...+.+..+. .
T Consensus 68 ~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~-----------~~~~~p~i~~~~--~ 134 (214)
T 2zg1_A 68 QGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVT-----------ALIEKPDIHFLE--P 134 (214)
T ss_dssp TTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEE-----------CCCCCCEEC--C--C
T ss_pred cCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEe-----------cCCCCCceecCc--c
Confidence 3566655432234568999999999999999999886521 135667776 212223333222 2
Q ss_pred EecCCeEEEEeEEeeC-C-CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 151 IENGSTINLTCVVRFS-P-EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~-p-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+.+|+.+.|.|.+.+. + .|.+.+.|++++..... . .. ...+.|.|..+..+|.|.|+|.|.|..+
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~--~--~~--------~~~~~L~i~~~~~~~~g~Y~C~a~n~~~ 201 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLD--P--ET--------TRSSELTLTPRPEDHGTNLTCQMKRQGA 201 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSC--S--SC--------CCSSEEEECCCTTCCSCEEEEEEECC--
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCC--C--Cc--------eeEEEEEEecccHHcCcEEEEEEEeCCC
Confidence 5689999999999764 2 25569999998854311 0 10 1223799999999999999999999864
No 155
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.61 E-value=7.3e-15 Score=109.80 Aligned_cols=146 Identities=16% Similarity=0.224 Sum_probs=87.4
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecC
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENG 154 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 154 (236)
.|+.... ......|.|.+++.+|+|.|.|.+.+.... .....|.|........+....+.+...+..++...+.+|
T Consensus 65 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 142 (247)
T 1svz_A 65 DRFSGSG--SGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPG 142 (247)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTT
T ss_pred CcEEecc--CCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCC
Confidence 4555442 124568999999999999999999886532 233566665100000000000001222333444568899
Q ss_pred CeEEEEeEEeeCCCCCCeEEEeecC--eEE---eeec-----------CCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 155 STINLTCVVRFSPEPPAYIFWNHNE--AII---SYDS-----------QRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 155 ~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
+++.|.|.+.+.+.+.+.+.|+++. ..+ .... ...+.....+ ......+|.|.+++.+|+|.|
T Consensus 143 ~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~DsG~Y 221 (247)
T 1svz_A 143 ETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLD-TSTSTAFLQINNLKNEDTATY 221 (247)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEE-GGGTEEEEEECSCCGGGCEEE
T ss_pred CcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEe-cCCCEEEEEECCCChhHCEEE
Confidence 9999999998874334589999863 211 1000 0223333221 112346899999999999999
Q ss_pred EEEeCCC
Q psy10361 219 QCNPANS 225 (236)
Q Consensus 219 ~C~a~n~ 225 (236)
.|.|.|.
T Consensus 222 ~C~a~n~ 228 (247)
T 1svz_A 222 FCVRDRH 228 (247)
T ss_dssp EEEEEEG
T ss_pred EEEEecc
Confidence 9999985
No 156
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.60 E-value=1.3e-14 Score=105.05 Aligned_cols=117 Identities=14% Similarity=0.187 Sum_probs=78.1
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCC------CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTP------HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTC 161 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C 161 (236)
....|.|.+++.+|+|.|+|.+.+.. ..+..+.|.|. .+.+.+.+...+...+.+|+++.|.|
T Consensus 61 ~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~-----------~~~~~p~i~~~p~~~v~~G~~v~L~C 129 (201)
T 1nkr_A 61 SKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVII-----------GLYEKPSLSAQPGPTVLAGENVTLSC 129 (201)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEE-----------CSSCCCEEEEESCSEECTTCEEEEEE
T ss_pred ceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEee-----------ccCCCCceecCCCCccCCCCeEEEEE
Confidence 35689999999999999999997532 12355677776 11122333222224678999999999
Q ss_pred EEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 162 VVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 162 ~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.+.+ +.+.+.|++++..+..... ... ...+ .....|.|.+++ |+|.|+|.|.+.
T Consensus 130 ~~~~---~~~~~~w~k~g~~~~~~~~--~~~--~~~~-~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 130 SSRS---SYDMYHLSREGEAHERRLP--AGP--KVNG-TFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EESS---CCSEEEEEETTCSSCEEEE--CEE--EETT-EEEEEEEEEECC--SCEEEEEEEEET
T ss_pred eCCC---CCceEEEEECCcccCcccc--ccc--ccCC-ceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 9875 3358999999876532110 011 0110 123579999998 999999999865
No 157
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.60 E-value=5.9e-15 Score=95.90 Aligned_cols=85 Identities=25% Similarity=0.428 Sum_probs=65.4
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+....+.+|+++.|.|.+.|.| .+.+.|++++..+... .++.+..+. ...+|.|.++..+|+|.|+|.|
T Consensus 17 ~~~p~~~~v~~G~~~~l~C~~~G~P--~p~v~W~k~g~~l~~~---~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a 88 (107)
T 3knb_B 17 LRFPRPVRVVSGAEAELKCVVLGEP--PPVVVWEKGGQQLAAS---ERLSFPADG---AEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCCC---SSEECCEET---TEEEEEESSCCGGGCEEEEEEE
T ss_pred EeCCCcEEEeCCCcEEEEEEEEEec--CCEEEEEECcccccce---eeEEEeecC---ceEEEEEecCChhhCEEEEEEE
Confidence 3445678899999999999999995 4599999999988542 233332232 3457999999999999999999
Q ss_pred CCCCC---ceEEEEEc
Q psy10361 223 ANSQA---KSVMVNVL 235 (236)
Q Consensus 223 ~n~~g---~~~~~~v~ 235 (236)
.|..| .++.|.|.
T Consensus 89 ~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 89 RNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCCEEEEEEEEEEE
Confidence 99998 44456654
No 158
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.60 E-value=4.7e-15 Score=109.07 Aligned_cols=137 Identities=18% Similarity=0.246 Sum_probs=87.2
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC------ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH------QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEV 149 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (236)
+|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...|.+. .++..
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~ 137 (222)
T 1q9r_B 68 GRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVS----------AAKTTPPSVYPLAPGS 137 (222)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEEC----------SSCCBCCEEEEECCCS
T ss_pred CceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEec----------cCCCCCCeEEEccccc
Confidence 56666543333567999999999999999999988542 2234566665 1111112221 11112
Q ss_pred EEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 150 FIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
.+..|+.+.|.|.+.+. |.| ..+.|++++..+.... .......+.....+.|.|..+..+| |.|+|.|.|..|.
T Consensus 138 ~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~~~~~~---~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~ 212 (222)
T 1q9r_B 138 AAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLSSGVHT---FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 212 (222)
T ss_dssp CCCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBCTTEEE---EEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred cccCCCcEEEEEEEccEECCC-CEEEEecCCeEcceEe---ccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCC
Confidence 24579999999999885 432 3999999986542110 0001111112234579999999889 9999999999984
No 159
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.60 E-value=1.7e-15 Score=110.59 Aligned_cols=138 Identities=16% Similarity=0.178 Sum_probs=85.7
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccC-CCcEEEec
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIG-GPEVFIEN 153 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 153 (236)
.|+.... ......|.|.+++.+|+|.|.|.+.+..+. .....|.|. ..+...+.+.. ++......
T Consensus 62 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~~~~~P~v~~~~~~~~~~~ 129 (212)
T 1q0x_L 62 ARFSGSL--IGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVL----------GQPKSSPTVTLFPPSSEELS 129 (212)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC----------CSCCBCCEEEEECCCHHHHT
T ss_pred ccEEEEe--eCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEe----------cCCCCCCeeEEeCCCHHHcc
Confidence 4555432 124568999999999999999999887542 233455553 01101111111 11112236
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|+.+.|.|.+.+.+.++..+.|++++..+......... ....++ ....+.|.|.....+|.|.|+|.|.|...
T Consensus 130 g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~-~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 130 TAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQP-SKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCC-EECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred CCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCc-eeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 88999999998864223489999999887431100001 111121 23446799999999999999999999864
No 160
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.60 E-value=2.7e-15 Score=117.78 Aligned_cols=121 Identities=12% Similarity=0.082 Sum_probs=84.7
Q ss_pred CCcEEEEEcCCCCCCCE-EEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 87 SDDWTLQLKYPQHKDTG-IYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 87 ~~~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
.....|.|.+++.+|+| .|+|.+.+..+.. ..+.|.|.. .| .+ .......|+.+.|.|.+.
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~----------~P----~i---~~~~~~~g~~v~l~C~~~ 271 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF----------PA----SV---QLHTAVEMHHWCIPFSVD 271 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE----------EE----EE---EECCCEESSSEEEEEEEE
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC----------CC----ee---eeccCccCceEEEEEEee
Confidence 35678999999999999 9999999886543 455555541 11 11 011234689999999999
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEee--cCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITE--KGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.| .+.+.|++++..+... .......... .......+|.|.++..+|+|.|+|.|.|..|
T Consensus 272 g~P--~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G 333 (347)
T 2ifg_A 272 GQP--APSLRWLFNGSVLNET-SFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFG 333 (347)
T ss_dssp EES--CCEEEEEETTEECCCC-SSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ecC--CCcEEEEeCCEECCCC-cceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCC
Confidence 994 4599999999887531 1111111110 1112345799999999999999999999998
No 161
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.59 E-value=1.4e-15 Score=123.20 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=74.3
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
..|.|.+++.+|+|.|+|.|.|..+.. ....+.+.. . ...++...+..+....+. +..+.|.|.+.+.+.
T Consensus 305 ~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~------~--~~~~P~v~~~~~~~~~~~-~~~~~L~C~~~g~~P 375 (444)
T 1igt_B 305 SALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPK------G--SVRAPQVYVLPPPEEEMT-KKQVTLTCMVTDFMP 375 (444)
T ss_dssp EEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCC------C--CCBCCEEEEECCCGGGTT-SSEEEEEEEEEEEBS
T ss_pred EEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccC------C--CCCCCEEEEeCCChHHcc-CCeEEEEEEEEeeeC
Confidence 479999999999999999999876543 222221100 0 000111111222211122 445999999998431
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
++..+.|++++..+.... ..... ...++ ....+.|.+.....+|.|.|+|.|.|..
T Consensus 376 ~~~~v~W~k~g~~l~~~~-~~~~~-~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 376 EDIYVEWTNNGKTELNYK-NTEPV-LDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp SCCEEEEEETTEECSSEE-ECCCE-ECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred CCCEEEEEECCEEccccc-cccce-eCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 223899999998773211 00111 11222 2234567777777788999999999986
No 162
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.59 E-value=6.6e-14 Score=107.62 Aligned_cols=173 Identities=14% Similarity=0.160 Sum_probs=100.4
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce-------------------------eEE----------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD-------------------------IHL---------- 65 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~-------------------------~~~---------- 65 (236)
...++..... .++..+|.|.+++.+|+|.|.|.+.+..+.. ..+
T Consensus 48 ~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C 126 (305)
T 2nzi_A 48 DGLKYRIQEF-KGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKI 126 (305)
T ss_dssp CSSSEEEEEE-TTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEE
T ss_pred CCCeEEEEEC-CCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEE
Confidence 3445555432 2345799999999999999999987532110 000
Q ss_pred ----ecceeeEEecCCcEE-------EEcCCCCCcEEEEEcC-CCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCc
Q psy10361 66 ----LTTGRYTYTNDQRFR-------VINNPTSDDWTLQLKY-PQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGK 132 (236)
Q Consensus 66 ----~~~~~~~~~~~~~~~-------~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~ 132 (236)
.+...+.|.+++... ... ......|.|.+ ++.+|.|.|+|.|.|..+.. ..+.|.|.
T Consensus 127 ~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~-------- 196 (305)
T 2nzi_A 127 PFSGKPDPVITWQKGQDLIDNNGHYQVIV--TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA-------- 196 (305)
T ss_dssp EEEEESCCEEEEEESSSBCCSSSSCEEEE--CSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEE--------
T ss_pred EECCCCCCEEEEEECCEECCCCCcEEEEE--cCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEe--------
Confidence 012235555543221 111 11346899999 99999999999999988654 56667766
Q ss_pred ccccCCCcccc--c--CCCcEEE------ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceE
Q psy10361 133 YLLVPEPETDI--I--GGPEVFI------ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTV 202 (236)
Q Consensus 133 ~~~~~~~~~~~--~--~~~~~~~------~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (236)
..|.++..+ . ....+.+ ..|....+.|.+...+. ....|.+.+... .
T Consensus 197 --~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~--~~~~w~~~~~~~--------------~----- 253 (305)
T 2nzi_A 197 --DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCAT--TAERWLRVGQAR--------------E----- 253 (305)
T ss_dssp --BCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEET--TSCCEEEEEEES--------------S-----
T ss_pred --cCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecC--CCCccEECcccc--------------C-----
Confidence 122111110 0 0111111 11233344444444422 244454432210 1
Q ss_pred EEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 203 SYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 203 ~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|.|.++...+.|.|+|.|.|..|
T Consensus 254 ~~~~i~~l~~~~~y~~~~~A~N~~G 278 (305)
T 2nzi_A 254 TRYTVINLFGKTSYQFRVIAENKFG 278 (305)
T ss_dssp SEEEECSCCSSCEEEEEEEEEETTE
T ss_pred ceEEecCCCCCCeEEEEEEEEeCCc
Confidence 2689999999999999999999998
No 163
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.59 E-value=2.1e-15 Score=109.98 Aligned_cols=138 Identities=18% Similarity=0.270 Sum_probs=86.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEecC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIENG 154 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 154 (236)
.+|+.+.........+|.|.+++.+|+|.|.|.+.+.........|.|.. .+...+.+. .++...+..|
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~----------~~~~~P~v~~~~~~~~~~~g 133 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGDYWGQGTLVTVSA----------AKTTPPSVYPLAPGSAAQTN 133 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSSCBCCCEEEEECC----------CCCBCCEEEEECCTTSCCCS
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCcccccceEEEecc----------CCCCCCEEEEecCCcccccC
Confidence 35666543222235689999999999999999998864323335666651 111111211 1212234679
Q ss_pred CeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 155 STINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 155 ~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+.+.|.|.+.+. |. +..+.|++++..+...... .. .........+.|.|..+..+| |.|+|.|.|..|.
T Consensus 134 ~~v~L~C~~~g~~P~-p~~v~W~~~~~~~~~~~~~-~~--~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 203 (210)
T 3d9a_H 134 SMVTLGCLVKGYFPE-PVTVTWNSGSLSSGVHTFP-AV--LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 203 (210)
T ss_dssp SEEEEEEEEEEEBSS-CCEEEEGGGTBCTTEEECC-CE--EETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGT
T ss_pred CcEEEEEEEeeEecC-CcEEEEeeCCcccceEEcC-Cc--cCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 999999999886 43 2399999988653211111 11 111111234579999988877 9999999999974
No 164
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.58 E-value=4e-15 Score=109.15 Aligned_cols=137 Identities=20% Similarity=0.256 Sum_probs=84.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-----ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-----QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEV 149 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (236)
..|+.+.........+|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...+.+. .++..
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~ 134 (219)
T 1c1e_H 65 KGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVS----------SAKTTPPSVYPLAPGS 134 (219)
T ss_dssp CSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEEC----------CCCCBCCEEEEECCCS
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEe----------cCCCCCCeEEEecCcc
Confidence 356665432222457899999999999999999988652 1234566665 1111112221 12122
Q ss_pred EEecCCeEEEEeEEee-CCCCCC-eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 150 FIENGSTINLTCVVRF-SPEPPA-YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~-~p~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+..|+.+.|.|.+.+ . |.+ .+.|++++..+...... . ....+.....+.|.|. ....|.|.|+|.|.|..+
T Consensus 135 ~~~~g~~v~L~C~~~g~~--P~p~~v~W~~~g~~~~~~~~~-~--~~~~~~~~~~s~L~i~-~~~~d~g~Y~C~a~n~~~ 208 (219)
T 1c1e_H 135 AAQTNSMVTLGCLVKGYF--PEPVTVTWNSGSLSSGVHTFP-A--VLQSDLYTLSSSVTVP-SSPRPSETVTCNVAHPAS 208 (219)
T ss_dssp SSCCSSEEEEEEEEEEEB--SSCCEEEEGGGTBCTTEEECC-C--EESSSCEEEEEEEEEE-SSSTTTSCCEEEEEEGGG
T ss_pred ccccCCeEEEEEEccccc--CCCeEEEEEeCCcccceEecC-C--cccCCeEEEEEEEEEe-cccCCCCEEEEEEEeCCC
Confidence 3457999999999998 6 445 99999998754211111 0 0111112234578884 444466999999999987
Q ss_pred c
Q psy10361 228 K 228 (236)
Q Consensus 228 ~ 228 (236)
.
T Consensus 209 ~ 209 (219)
T 1c1e_H 209 S 209 (219)
T ss_dssp T
T ss_pred C
Confidence 4
No 165
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.58 E-value=1.2e-13 Score=104.36 Aligned_cols=157 Identities=15% Similarity=0.205 Sum_probs=93.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEee-----CCccc-ccCCCcccccCCC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVIN-----DGKYL-LVPEPETDIIGGP 147 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~-----~~~~~-~~~~~~~~~~~~~ 147 (236)
..|+.... ......|.|.+++.+|+|.|.|.+.+.... .....|.|...... ..+.. ..+.+...+..++
T Consensus 69 ~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2gjj_A 69 PDRFTGSG--SGTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSG 146 (264)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECC
T ss_pred CccEEEec--CCCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCC
Confidence 35666542 124678999999999999999999886432 23456777610000 00000 0001112223334
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eee-ec----------CCCceEEEeecCcceEEEEEEcccC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISY-DS----------QRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~-~~----------~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
...+.+|+++.|.|.+.+.+.+.+.+.|+++. .. +.. .. ..++..+..+ ......+|.|.+++
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~ 225 (264)
T 2gjj_A 147 PEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVD-TSSSTAFMQLNSLT 225 (264)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEE-TTTTEEEEEECSCC
T ss_pred CEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEc-CCCCEEEEEECcCC
Confidence 45788999999999998874213589999863 21 211 00 0123333221 12235689999999
Q ss_pred CCCCeEEEEEeCCC--------CCceEEEEEc
Q psy10361 212 PSDNGKYQCNPANS--------QAKSVMVNVL 235 (236)
Q Consensus 212 ~~d~G~y~C~a~n~--------~g~~~~~~v~ 235 (236)
.+|+|.|.|.+.|. .|....|.|.
T Consensus 226 ~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~v~ 257 (264)
T 2gjj_A 226 SEDSADYYCVRSGNYEEYAMDYWGQGTSVTVS 257 (264)
T ss_dssp GGGCEEEEEEEECSGGGCSCCCBCCCEEEEEC
T ss_pred cccCEEEEEEEecCCCCcceEEECCCEEEEEe
Confidence 99999999999984 2555566553
No 166
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.58 E-value=4e-14 Score=104.86 Aligned_cols=138 Identities=15% Similarity=0.203 Sum_probs=84.3
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC---------CceeEEEEEEEEEEeeCCcccccCCCccccc-CC
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP---------HQAHYIYLTVVVLVINDGKYLLVPEPETDII-GG 146 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~---------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~ 146 (236)
+|+.+..........|.|.+++.+|+|.|.|.+.+.. .......|.|. ..+...+.+. .+
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~v~~~~ 139 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVS----------SASTKGPSVFPLA 139 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEEC----------SSCCBCCEEEEEC
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEe----------cCCCCCCEEEEec
Confidence 5777665544567889999999999999999998652 12233456664 1111222232 23
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
+...+..|+.+.|.|.+.+.+.+...+.|++++..+...... .....+......+.|.|......| |.|+|.|.|..
T Consensus 140 ~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~--~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~ 216 (232)
T 3qhz_H 140 PSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP--AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 216 (232)
T ss_dssp C-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC--CEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGG
T ss_pred ccccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeecc--ceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCC
Confidence 333455799999999998854234578899988543211110 011111222344678899988888 99999999988
Q ss_pred C
Q psy10361 227 A 227 (236)
Q Consensus 227 g 227 (236)
+
T Consensus 217 ~ 217 (232)
T 3qhz_H 217 S 217 (232)
T ss_dssp G
T ss_pred C
Confidence 6
No 167
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.58 E-value=2.4e-15 Score=110.18 Aligned_cols=138 Identities=17% Similarity=0.222 Sum_probs=83.6
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC------ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH------QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEV 149 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (236)
.|+.+.. .....+|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...+.+. .+...
T Consensus 64 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~~~~~~~~~ 131 (218)
T 3s96_B 64 DRFSGSS--SGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVL----------GQPKSTPTLTVFPPSS 131 (218)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEE----------SCCCBCCEEEEECCCH
T ss_pred cceEEec--CCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEe----------cCCCCCceEEeeCCCc
Confidence 3555443 23567899999999999999999987653 1234566766 1111112221 12222
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
....|+.+.|.|.+.+.+.++..+.|++++..+........ ....+......+.|.|.....+|.|.|+|.|.|..+
T Consensus 132 ~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~-~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 132 EELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSN-PTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC---------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred ccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCc-ccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 23457899999999884212238999999988754211111 111112222334588888888899999999999986
No 168
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.58 E-value=7.8e-15 Score=109.66 Aligned_cols=124 Identities=22% Similarity=0.306 Sum_probs=75.0
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee-
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF- 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~- 165 (236)
...+|.|.+++.+|+|.|+|.+.+..+. ...+.|.|. .+ +...+. +. ..+..|+.+.|.|.+.+
T Consensus 80 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~-----------~~-P~v~~~-~~-~~~~~~~~~~L~C~~~g~ 145 (248)
T 3pv7_A 80 GDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVV-----------AS-PASRLL-LD-QVGMKENEDKYMCESSGF 145 (248)
T ss_dssp TBCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-----------BC-CEEEEE-CC---------CEEEEEEEEE
T ss_pred CcEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEe-----------cC-CceEEe-cC-CccccCCCcEEEEEEccE
Confidence 3557999999999999999999887643 356677776 11 111111 11 23445778889999998
Q ss_pred CCCCCC-eEEEeecCeEEeee---cCCC--ceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPA-YIFWNHNEAIISYD---SQRG--GVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~-~v~W~~~~~~~~~~---~~~~--~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. |.+ .+.|++++..+... .... .......++ ....+.|.+.....+|.|.|+|.|.|..+
T Consensus 146 ~--P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~ 212 (248)
T 3pv7_A 146 Y--PEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASL 212 (248)
T ss_dssp B--SSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTC
T ss_pred E--CCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCC
Confidence 6 445 99999998543210 0000 001111111 22345788888889999999999999987
No 169
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.58 E-value=8e-15 Score=114.22 Aligned_cols=116 Identities=21% Similarity=0.300 Sum_probs=80.2
Q ss_pred CcEEEEEcCCCCCCCE-EEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTG-IYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G-~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 165 (236)
....|.|.+++.+|+| .|+|.+.+..+.. ....+.+. ..| + ..........+.+|+.+.|.|.+.+
T Consensus 87 ~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~----------~~~-p-~~~~~~~~~~~~~G~~v~L~C~~~g 154 (329)
T 3oq3_B 87 KNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHI----------RKP-P-SCIPETYELGTHDKYGIDLYCGILY 154 (329)
T ss_dssp ETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEE----------CCC-C-SCEEEEEETTSSTTTCEEEECCCCS
T ss_pred ecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEE----------cCC-C-cEeccccceEEeCCCcEEEEeccCC
Confidence 3568999999999999 9999999977543 22222333 111 1 1111111222457999999999998
Q ss_pred CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.|. .+.+.|++++..+.... .+... .+. .|.|.++..+|+|.|+|.|.|.
T Consensus 155 ~p~-~~~i~W~k~~~~l~~~~--~~~~~--~~~-----~L~I~~v~~~D~G~Y~C~a~n~ 204 (329)
T 3oq3_B 155 AKH-YNNITWYKNNQELIIDG--TKYSQ--SGQ-----NLIIHNPELEDSGRYDCYVHYD 204 (329)
T ss_dssp CCC-CCEEEEEETTEECCCSS--SSEEE--ETT-----EEEECSCCGGGCEEEEEEEEEC
T ss_pred CCC-CceEEEEECCccCCCCC--ceEec--CCC-----EEEEeecChhhCEEEEEEEEec
Confidence 841 56999999998874221 22222 232 7999999999999999999987
No 170
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.58 E-value=2.8e-14 Score=108.78 Aligned_cols=125 Identities=20% Similarity=0.257 Sum_probs=85.3
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCC-ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPH-QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
....|.|.+++.+|+|.|+|.+.+..+ .+..+.|.|. .+ +.+....+....+.+|+++.|.|.+.+.
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~-----------~~-~~~~~~~~~~~~v~~g~~v~L~C~~~~~ 116 (289)
T 3ejj_X 49 PGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVK-----------DP-AHSWNLLAQEVTVVEGQEAVLPCLITDP 116 (289)
T ss_dssp SCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEEC-----------CS-SCSEEESCSEEEEETTSCEEECEEESCG
T ss_pred CccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEe-----------CC-CcceecccceEEEecCCceEeEEEccCC
Confidence 457899999999999999999987654 3466777776 22 2223344567788999999999999876
Q ss_pred CCCCCeEEEee-cCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC-CCCC---ceEEEEE
Q psy10361 167 PEPPAYIFWNH-NEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA-NSQA---KSVMVNV 234 (236)
Q Consensus 167 p~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~-n~~g---~~~~~~v 234 (236)
+ ++..+.|++ ++..+. ...+.... .++ .|.|.++..+|.|.|+|.+. |..+ ..+.|.|
T Consensus 117 ~-~~~~v~W~~~~~~~~~---~~~~~~~~-~~~-----~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V 179 (289)
T 3ejj_X 117 A-LKDSVSLMREGGRQVL---RKTVYFFS-PWR-----GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKV 179 (289)
T ss_dssp G-GGGSEEEEEGGGEECC---TTCCEEEE-TTT-----EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred C-cceEEEEEecCCeecC---CCccEEEC-CCC-----CEEEeecccccCEEEEEEEEeCCCccccccEEEEE
Confidence 3 223499986 444442 12233332 232 69999999999999999998 4433 4445544
No 171
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.58 E-value=1.7e-14 Score=112.11 Aligned_cols=125 Identities=17% Similarity=0.140 Sum_probs=85.4
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce------eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA------HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTC 161 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~------~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C 161 (236)
....|.|.+++.+|+|.|+|.+.+..+.. ....|.|. .++..+.+..+ ...+.+|+.+.|.|
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~-----------~~p~~p~i~~~-~~~~~~g~~~~l~C 139 (327)
T 2wng_A 72 MDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVR-----------AKPSAPVVSGP-AARATPQHTVSFTC 139 (327)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEE-----------BCCCCCEEECC-SSCBCTTCEEEEEE
T ss_pred ceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEE-----------ecCCCceeecc-ccccCCCCEEEEEE
Confidence 45689999999999999999998865421 33567776 22233333322 34567899999999
Q ss_pred EEeeCCCCCCeEEEeecCeEEeeecCCCceEEEe--ecC-cceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 162 VVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVIT--EKG-ETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 162 ~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
.+.+.|.|+..+.|++++..+.... ..... .++ ....+.|.|.....+|.|.|+|.|.|..+.
T Consensus 140 ~~~g~p~~~~~v~W~k~g~~l~~~~----~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 140 ESHGFSPRDITLKWFKNGNELSDFQ----TNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EEEEEBSSCCEEEEEETTEECCCEE----EEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred EEeCccCCCcEEEEEECCEEccccc----cccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 9998853334899999998874321 11111 111 123346878777777789999999998764
No 172
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.57 E-value=2.4e-14 Score=105.12 Aligned_cols=140 Identities=20% Similarity=0.296 Sum_probs=87.2
Q ss_pred CCcEEEEcCC---CCCcEEEEEcCCCCCCCEEEEEEeecCC-C-ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEE
Q psy10361 76 DQRFRVINNP---TSDDWTLQLKYPQHKDTGIYECQVSTTP-H-QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (236)
.+|+.+.... .....+|.|.+++.+|+|.|+|.+.+.. + ....+.|.|. .+ +...+......
T Consensus 61 ~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~-----------~~-P~~~~~~~~~~- 127 (221)
T 3eow_R 61 SKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVL-----------AK-PQNTAEVQKVQ- 127 (221)
T ss_dssp CSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCC-----------CC-CEEEEEEECCC-
T ss_pred CCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEE-----------EC-CCceeecCCcc-
Confidence 4555554321 2246789999999999999999998854 2 3355566665 11 11111111111
Q ss_pred EecCCeE-EEEeEEe-eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC-
Q psy10361 151 IENGSTI-NLTCVVR-FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA- 227 (236)
Q Consensus 151 ~~~g~~~-~l~C~~~-~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g- 227 (236)
..|+.+ .|.|.+. +.| .+.+.|++++...... ..............+.|.|..+..+|.|.|+|.|.|..+
T Consensus 128 -~~g~~~~~l~C~~~~g~P--~p~v~W~k~~~~~~~~---~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~ 201 (221)
T 3eow_R 128 -LTGEPVPMARCVSTGGRP--PAQITWHSDLGGMPQT---SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFE 201 (221)
T ss_dssp -CCSSSCCEEEEEEESCSS--CCCEEEECSSSCCCCC---EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSS
T ss_pred -cCCceEEEEEEECCCccC--CCeeEEEeCCCCCCcc---ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCC
Confidence 567888 5999987 674 4599999864332110 000001112223456899999999999999999999986
Q ss_pred ceEEEEE
Q psy10361 228 KSVMVNV 234 (236)
Q Consensus 228 ~~~~~~v 234 (236)
..+.+.|
T Consensus 202 ~~~~~~v 208 (221)
T 3eow_R 202 KPQLLTV 208 (221)
T ss_dssp SCEEEEE
T ss_pred CCeEEEE
Confidence 4444443
No 173
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.57 E-value=2.2e-14 Score=107.81 Aligned_cols=140 Identities=16% Similarity=0.245 Sum_probs=97.7
Q ss_pred CCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEE
Q psy10361 45 HKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVV 124 (236)
Q Consensus 45 ~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~ 124 (236)
.++.-...|.+..... ...+.|.+++..... ....|.|.+++.+|+|.|+|.+.+... +..+.+.|.
T Consensus 15 ~G~~v~l~C~~~~~~~-------~~~~~W~~~g~~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~~~~~-s~~~~l~v~ 81 (262)
T 3rjd_A 15 QEETVTLHCEVLHLPG-------SSSTQWFLNGTATQT-----STPSYRITSASVNDSGEYRCQRGLSGR-SDPIQLEIH 81 (262)
T ss_dssp TTCCEEEEEECSSCCC-------TTCEEEEETTEECSC-----CSSEEEESSCCGGGCEEEEEEESSSCC-CCCEEEEEE
T ss_pred CCCeEEEEEECCCCCC-------CceEEEEECCEEeec-----cCCeEEEecCCcccCeEEEEEEecCCc-cccEEEEEe
Confidence 4566677776542211 114456655543211 356799999999999999999987653 334667776
Q ss_pred EEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEE
Q psy10361 125 VLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVS 203 (236)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (236)
.+. ....+....+.+|+.+.|.|.+ .+. |.+.+.|++++..+.... .. .
T Consensus 82 -------------~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~--p~~~v~W~~~g~~~~~~~---------~~-----~ 131 (262)
T 3rjd_A 82 -------------RGW-LLLQVSSRVFTEGEPLALRCHAWKDK--LVYNVLYYRNGKAFKFFH---------WN-----S 131 (262)
T ss_dssp -------------CSS-EEEEESCSEEETTSCEEEEEEEGGGC--CCEEEEEEETTEEEEEEE---------EC-----C
T ss_pred -------------ccc-eEecCCCeEEecCCeEEEEEEccCCC--CCceEEEEECCccccccC---------CC-----C
Confidence 222 2223344567899999999999 555 556999999998774321 11 2
Q ss_pred EEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 204 YLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 204 ~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|.|.++..+|.|.|+|.+.|..+
T Consensus 132 ~l~i~~~~~~d~G~Y~C~~~n~~~ 155 (262)
T 3rjd_A 132 NLTILKTNISHNGTYHCSGMGKHR 155 (262)
T ss_dssp CEEESSCCGGGCEEEEEEEESSSE
T ss_pred eEEEEECChhhCEEEEEEEeCCCC
Confidence 699999999999999999999986
No 174
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.57 E-value=2.6e-14 Score=106.57 Aligned_cols=114 Identities=10% Similarity=0.154 Sum_probs=80.8
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCC---ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPH---QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
....|.|.+++.+|+|.|+|.+.+... .+..+.|.|. ...+.+.+...+...+.+|++++|.|.+.
T Consensus 58 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~-----------~~~~~P~i~~~p~~~v~~G~~vtL~C~~~ 126 (242)
T 1p6f_A 58 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVT-----------EMYDTPTLSVHPGPEVISGEKVTFYCRLD 126 (242)
T ss_dssp CEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEE-----------CCSCCCEEEEESCSEEETTCEEEEEEECT
T ss_pred ceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEee-----------cccCCCceEccCCCccCCCCcEEEEEecC
Confidence 467899999999999999999977532 2355677776 11122333322334678999999999986
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+. .+.+.|++++..+... .. .. .....|.|.+++.+|+|.|+|.+.|.
T Consensus 127 ~~---~~~~~w~k~g~~~~~~-----~~--~~---~~~~~l~I~~v~~~d~G~Y~C~a~n~ 174 (242)
T 1p6f_A 127 TA---TSMFLLLKEGRSSHVQ-----RG--YG---KVQAEFPLGPVTTAHRGTYRCFGSYN 174 (242)
T ss_dssp TS---CSEEEEEECSSSCEEE-----EE--EC---SSEEEEEEEECCGGGCEEEEEEEEEE
T ss_pred CC---CCEEEEEECCCccCcc-----cc--CC---CceEEEEeCCCccccCEEEEEEEECC
Confidence 54 3499999998655321 00 01 12357999999999999999999875
No 175
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.57 E-value=3.2e-14 Score=108.45 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=88.8
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecC--------CC--ceeEEEEEEEEEEeeC-CcccccCCCccccc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTT--------PH--QAHYIYLTVVVLVIND-GKYLLVPEPETDII 144 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~--------~~--~~~~~~l~v~~~~~~~-~~~~~~~~~~~~~~ 144 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+. .. ......|.|....... ........+.+.+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~ 144 (280)
T 3fku_X 65 QGRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLT 144 (280)
T ss_dssp TTTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBB
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEE
Confidence 3566665433445679999999999999999999876 11 1234455555100000 00000000123334
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEee---e------cCCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIISY---D------SQRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~~---~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
.++...+.+|+++.|.|.+.+.+.+.+.+.|++.. ..+.. . ....+....... ...+|.|.+++.+
T Consensus 145 ~~p~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~ 221 (280)
T 3fku_X 145 QPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSG---NTASLTITGLQPE 221 (280)
T ss_dssp CCSEEEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEET---TEEEEEECSCCGG
T ss_pred eCCcEEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccC---CEEEEEECCCCHH
Confidence 34447889999999999998732223589998732 21110 0 011233333222 3457999999999
Q ss_pred CCeEEEEEeCCCC
Q psy10361 214 DNGKYQCNPANSQ 226 (236)
Q Consensus 214 d~G~y~C~a~n~~ 226 (236)
|+|.|.|.+.|..
T Consensus 222 DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 222 DEADYYCSTWDSS 234 (280)
T ss_dssp GCSEEEEEEEETT
T ss_pred HCEEEEEEEecCC
Confidence 9999999998875
No 176
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.56 E-value=1.6e-15 Score=118.17 Aligned_cols=131 Identities=19% Similarity=0.282 Sum_probs=56.3
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCC---------cccccCCCccccc-----CCCcEEEecC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDG---------KYLLVPEPETDII-----GGPEVFIENG 154 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~~~~~g 154 (236)
...|.|.+++.+|+|.|+|.+.+.......+.|.|........ ...... ..+.+. ......+..|
T Consensus 60 ~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~p~~~~~~~~~v~~g 138 (334)
T 1ry7_B 60 PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDT-GAPYWTRPERMDKKLLAVPAA 138 (334)
T ss_dssp ------------------------------------------------------------CCCCSCCTTCCCCEEEEETT
T ss_pred cceEEEeecccccCEEEEEEEEeCCeEEEEEEEEEeccCccccccccccccccccccC-CCCEEeccccccceeEEecCC
Confidence 4689999999999999999998872223455566652100000 000000 011111 1234678899
Q ss_pred CeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 155 STINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 155 ~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+++.|.|.+.+. |.+.+.|++++..+............... ..|.|.++..+|.|.|+|.|.|..|
T Consensus 139 ~~v~l~C~~~g~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 204 (334)
T 1ry7_B 139 NTVRFRCPAAGN--PTPSISWLKNGREFRGEHRIGGIKLRHQQ-----WSLVMESVVPSDRGNYTCVVENKFG 204 (334)
T ss_dssp CCEEEECCCCCS--SCCEEECCBTTBCCCTTSSTTCCCCCTTT-----TEEEECSCCGGGCCCEEEEEEETTE
T ss_pred CcEEEEEEccCC--CCCeEEEEECCEECcccccccceecccce-----EEEEECCCCcccCEEEEEEEEeCCC
Confidence 999999999888 44599999999876432211111111111 3799999999999999999999987
No 177
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.56 E-value=2e-14 Score=101.49 Aligned_cols=104 Identities=16% Similarity=0.162 Sum_probs=73.6
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
.+++|.|.+++.+|+|.|.|.+.+..+ ...+.|.|. .+.+.+.+. ... ....|.|.+.+.
T Consensus 58 ~~~sL~I~~v~~~DsG~Y~C~~~n~~~-~~~~~L~V~-----------~~~~~p~i~------~~~-~~~~L~C~~~~~- 117 (171)
T 1ccz_A 58 VSGSLTIYNLTSSDEDEYEMESPNITD-TMKFFLYVL-----------EMVSKPMIY------WEC-SNATLTCEVLEG- 117 (171)
T ss_dssp TTCCEEECSCCGGGCEEEEEECTTCCS-CEEEEEEEE-----------CCCCCCEEE------EET-TTTEEEEECSSC-
T ss_pred CCCeEEECCCChhhCceEEEEEeCCCC-cEEEEEEEE-----------CcCCCCEEE------Eec-CCcEEEEEeCCC-
Confidence 356899999999999999999988766 666788887 222222221 111 113799999887
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCce
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKS 229 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~ 229 (236)
|.+.+.|++++..+...... .|.+. ...|.|.|+|.|.|.+|..
T Consensus 118 -p~p~i~W~~~~~~l~~~~~~---------------~l~~~--~~~~~g~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 118 -TDVELKLYQGKEHLRSLRQK---------------TMSYQ--WTNLRAPFKCKAVNRVSQE 161 (171)
T ss_dssp -SSCEEEEEETTEEEEEESSS---------------EEEEE--CSCCSSCEEEEEEETTEEE
T ss_pred -CCcEEEEEECCEECcCCcce---------------EEEEe--ccCCCceEEEEEEcccCcc
Confidence 44599999999887532111 34333 3678999999999999843
No 178
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.56 E-value=2.8e-14 Score=101.59 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=77.9
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCe
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGST 156 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (236)
+|+.+. ..+++|.|.+++.+|+|.|+|.+.+.......+.|.|. .+.+.+. .. ..+++
T Consensus 60 ~R~~l~----~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~L~V~-----------~~~~~P~------i~-~~~~~ 117 (180)
T 2dru_A 60 DRVDLD----KTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVY-----------EMVSKPM------IY-WECSN 117 (180)
T ss_dssp TTEEEC----TTTCCEEECSCCGGGCEEEEEEEESSSEEEEEEEEEEE-----------CCCCCCE------EE-EEGGG
T ss_pred CeEEEe----CCCccEEEcCCCHHHCeEEEEEEEcCCeEEEEEEEEEE-----------CCCCCCE------EE-ecCCC
Confidence 455552 14678999999999999999999776533456677776 2212222 22 23567
Q ss_pred EEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceEE
Q psy10361 157 INLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSVM 231 (236)
Q Consensus 157 ~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~~ 231 (236)
+.|.|.+...| .+.+.|++++..+... .+. +|.+.. .+|.|.|+|.|.|.++....
T Consensus 118 v~L~C~~~~gp--~p~i~W~~~~~~l~~~----------~~~-----~l~~~~--~~d~g~Y~C~a~N~~~~~~~ 173 (180)
T 2dru_A 118 ATLTCEVLEGT--DVELKLYQGKEHLRSL----------RQK-----TMSYQW--TNLRAPFKCKAVNRVSQESE 173 (180)
T ss_dssp TEEEEECSSCT--TCEEEEEETTEEEEEE----------SSS-----EEEEEC--SCCSSCEEEEEEETTEEEEE
T ss_pred EEEEEEeCCCC--CCEEEEEECCeECcCC----------CCC-----EEEEEE--hhcCccEEEEEecCcCcccc
Confidence 99999994334 4599999999877411 111 455532 78999999999999985443
No 179
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.56 E-value=5.2e-15 Score=113.05 Aligned_cols=118 Identities=18% Similarity=0.188 Sum_probs=82.9
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
....|.|.+++.+|+|.|+|.+.+..+. +..+.|.|. .+ +.+....+....+.+|+++.|.|.+.+
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~-----------~~-~~~~~~~~~~~~v~~g~~v~l~C~~~~- 115 (292)
T 4dkd_C 49 SSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVK-----------DP-ARPWNVLAQEVVVFEDQDALLPCLLTD- 115 (292)
T ss_dssp TEEEEEESSCCGGGCSCEEECCCC----CCEEECCEEC-----------CS-SCCEEESCSEEEEETTSCEECCEEESS-
T ss_pred ceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEc-----------Cc-cccccccCCeEEEcCCCcEEEeeeCCC-
Confidence 3568999999999999999999886543 466677776 22 222334455778899999999999987
Q ss_pred CCCCCeEEEeecC-eEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNE-AIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.+.|++++ ..+.. ..+... ..++ .|.|.++..+|.|.|+|.+.|..+
T Consensus 116 ~~~~~~v~W~~~~~~~~~~---~~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~~ 168 (292)
T 4dkd_C 116 PVLEAGVSLVRVRGRPLMR---HTNYSF-SPWH-----GFTIHRAKFIQSQDYQCSALMGGR 168 (292)
T ss_dssp GGGGSSEEEEEGGGCCCCS---SCCEEC-CSSS-----CCEETTCCGGGCSEEEEEECSTTS
T ss_pred CCcceeEEEEecCCCcccc---CCcccc-cCCc-----eEEECCCCHHHCeEEEEEEEeCCC
Confidence 4333589999874 33321 112221 1222 499999999999999999999876
No 180
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.56 E-value=2.2e-14 Score=109.63 Aligned_cols=112 Identities=15% Similarity=0.148 Sum_probs=83.0
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEP 169 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 169 (236)
..|.|.+++.+|+|.|+|.+.+ +....+.|.|. .+ +.+. ..+....+.+|+.+.|.|.+.+ |.
T Consensus 57 ~~L~i~~~~~~d~G~Y~C~~~n--g~~~~~~l~V~-----------~~-~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~- 119 (290)
T 2o26_X 57 NEWIQEKAEATRTGTYTCSNSN--GLTSSIYVFVR-----------DP-AKLF-LVGLPLFGKEDSDALVRCPLTD-PQ- 119 (290)
T ss_dssp SEEEETTCCGGGCEEEEEEESS--SCEEEEEEEEE-----------CS-SCCB-CCCCCEEEETTSCEEECCCBSC-CS-
T ss_pred ceEEEeccCHHhCeEEEEEeeC--CccEEEEEEEe-----------CC-Cccc-ccccceEEecCCeEEEeCcCCC-CC-
Confidence 6899999999999999999999 44666777777 22 2222 3455678889999999999985 32
Q ss_pred CCeEEEe-ecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe-EEEEEeCCCCC
Q psy10361 170 PAYIFWN-HNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG-KYQCNPANSQA 227 (236)
Q Consensus 170 ~~~v~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~y~C~a~n~~g 227 (236)
.+.+.|+ +++..+.. ..+.... .++ .|.|.++..+|.| .|+|.|.|..+
T Consensus 120 ~~~v~W~~~~g~~l~~---~~~~~~~-~~~-----~L~i~~v~~~d~G~~Y~C~a~n~~~ 170 (290)
T 2o26_X 120 VSQYSLIECDGKSLPT---DLTFVPN-PKA-----GITIKNVKRAYHRLCVRCAAQRDGT 170 (290)
T ss_dssp CEEEEEEETTSCCCCT---TCEEEEE-TTT-----EEEEESCCGGGTTCEEEEEEEETTE
T ss_pred CceEEEEeCCCcCCCC---CCceeeC-CCC-----CEEEecccHHHCCCEEEEEEEECCc
Confidence 2699995 67765532 1222222 222 6999999999999 99999999865
No 181
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.56 E-value=1.4e-13 Score=105.92 Aligned_cols=132 Identities=18% Similarity=0.161 Sum_probs=86.4
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEe-eCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe-eC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVI-NDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR-FS 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~ 166 (236)
...|.|.+++.+|+|.|+|.+.+..+......+.|..... ........+ +...+.......+.+|+++.|.|.+. +.
T Consensus 57 ~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~~~~~~~-p~~~~~~~~~~~v~~G~~v~l~C~~~~~~ 135 (312)
T 2y23_A 57 KTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKF-PTVPVKSELAVEILEKGQVRFWMQAEKLS 135 (312)
T ss_dssp EEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHHHHHHHHS-CBCCEEEEEEEEECSSSCEEEEEEESCCC
T ss_pred EEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeecccccCCC-CccccccCCceEEeeCCCEEEEEEEEeCC
Confidence 4689999999999999999999977655544544430000 000000001 11111112266788999999999998 66
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+.+.|++++..+... .+....... ......|.|.++..+|.|.|+|.+.|..+
T Consensus 136 --p~~~v~W~~~~~~i~~~---~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 190 (312)
T 2y23_A 136 --GNAKVNYIFNEKEIFEG---PKYKMHIDR-NTGIIEMFMEKLQDEDEGTYTFQLQDGKA 190 (312)
T ss_dssp --SSCEEEEEETTEEECSS---SSCEEEEET-TTTEEEEEESCCCGGGCEEEEEEEESSSC
T ss_pred --CCCEEEEEECCEECeeC---CcEEEEEcc-CCCEEEEEEccCCcccCEeEEEEEEeCCc
Confidence 45699999999988542 233332221 12335799999999999999999987654
No 182
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.56 E-value=1.5e-15 Score=110.83 Aligned_cols=138 Identities=20% Similarity=0.208 Sum_probs=85.9
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC--Cc--eeEEEEEEEEEEeeCCcccccCCCcccccC-CCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP--HQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIG-GPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~--~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (236)
.|+.... ......|.|.+++.+|+|.|+|.+.+.. .. .....|.|. ..+...+.+.. ++...+
T Consensus 58 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~----------~~~~~~p~v~~~~~~~~~ 125 (212)
T 1nfd_E 58 ERFSGST--SGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVL----------RGPKSSPKVTVFPPSPEE 125 (212)
T ss_dssp TTEEEEE--ETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEE----------CCCCBCCEEECCCCCHHH
T ss_pred ccEEEEe--eCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEc----------cCCCCCCEEEeeCCchHh
Confidence 4555432 1245689999999999999999999622 11 233455664 11111122211 222223
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|+.+.|.|.+.+.+.+.+.+.|++++..+......... ....++....+.|.|.++..+|+|.|+|.|.|..+
T Consensus 126 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (212)
T 1nfd_E 126 LRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP-SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGE 200 (212)
T ss_dssp HHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC-BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTT
T ss_pred ccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc-eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCc
Confidence 4689999999998863123699999999887532111000 01111122235699999999999999999999975
No 183
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=9.3e-16 Score=113.61 Aligned_cols=139 Identities=14% Similarity=0.185 Sum_probs=85.3
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc----eeEEEEEEEEEEeeCCcccccCCCcccccC-CCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ----AHYIYLTVVVLVINDGKYLLVPEPETDIIG-GPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (236)
.|+.... ......|.|.+++.+|+|.|+|.+.+..+. .....|.|. ..+...+.+.. ++....
T Consensus 80 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~----------~~~~~~p~v~~~~~~~~~ 147 (234)
T 2j6e_L 80 DRFSGSK--SGTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVL----------GQPKAAPSVTLFPPSSEE 147 (234)
T ss_dssp TTEEEEE--ETTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBC----------CCCCCCCCCCEECCCHHH
T ss_pred ccEEEEe--cCCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEe----------cCCCCCCcccccCCChhH
Confidence 4555432 124568999999999999999999987651 123345553 01111111111 111122
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|+.+.|.|.+.+.+.+++.+.|++++..+.............+......+.|.|..+..+|.|.|+|.|.|..+
T Consensus 148 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 223 (234)
T 2j6e_L 148 LQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 223 (234)
T ss_dssp HTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTB
T ss_pred hcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCC
Confidence 3588999999998864223589999999877431100000000111123446799999999999999999999875
No 184
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.55 E-value=2.2e-14 Score=111.99 Aligned_cols=119 Identities=18% Similarity=0.220 Sum_probs=85.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeE-----
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCV----- 162 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~----- 162 (236)
+..|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .++............+..|+.+.|.|.
T Consensus 80 ~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~-----------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~ 148 (339)
T 3o4o_C 80 DGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVF-----------ENTDAFLPFISYPQILTLSTSGVLVCPDLSEF 148 (339)
T ss_dssp TTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEE-----------CSCGGGHHHHCEEEEEETTSCEEEECCSCTTT
T ss_pred CCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEE-----------cCCCccccccccceEEECCCCEEEEecCCccc
Confidence 4479999999999999999999876533 56677776 111111111123357789999999999
Q ss_pred EeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 163 VRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 163 ~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+.+. |.+.+.|++++..+... ..+....... ..|.|.++..+|.|.|+|.|.|..|
T Consensus 149 ~~g~--p~~~v~W~k~g~~~~~~--~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 204 (339)
T 3o4o_C 149 TRDK--TDVKIQWYKDSLLLDKD--NEKFLSVRGT-----THLLVHDVALEDAGYYRCVLTFAHE 204 (339)
T ss_dssp CCSS--SCCCBCCEESSCBCCTT--CSSEEECTTS-----SEEEESSCCGGGCEEEEEEEECCBT
T ss_pred ccCC--CCceEEEecCCeeCCCC--CceeEEcCCc-----ceEEEcccCHhhCeEEEEEEEECCC
Confidence 6666 55599999999877432 1233322222 2799999999999999999999886
No 185
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.55 E-value=4.8e-15 Score=111.19 Aligned_cols=137 Identities=13% Similarity=0.176 Sum_probs=84.8
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEec
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIEN 153 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (236)
.|+.... ......|.|.+++.+|+|.|.|.+.+.... .....|.|. .+...+.+. .++...+..
T Consensus 98 ~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~P~v~~~~~~~~~~~ 164 (252)
T 3bkj_L 98 DRFSGSG--SGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELK-----------RADAAPTVSIFPPSSEQLT 164 (252)
T ss_dssp TTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEEC-----------CCCBCCEEEEECCCHHHHH
T ss_pred CceEEEc--cCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEe-----------CCCcCcEEEEeCCChhhcC
Confidence 4555432 124568999999999999999999886532 233456665 111111211 111111236
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-cCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-SQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|+.+.|.|.+.+.+.++..+.|++++..+... ....... ...++ ....+.|.|..+..+|.|.|+|.|.|...
T Consensus 165 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 239 (252)
T 3bkj_L 165 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ-DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 239 (252)
T ss_dssp HTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCC-CTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred CCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcc-cCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCC
Confidence 88999999998853122479999999876421 0000000 01111 23446799999999999999999999874
No 186
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.55 E-value=4.5e-14 Score=108.20 Aligned_cols=155 Identities=13% Similarity=0.149 Sum_probs=89.5
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC-C-----ceeEEEEEEEEE-EeeCCcccccC-CCccccc-CCC
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP-H-----QAHYIYLTVVVL-VINDGKYLLVP-EPETDII-GGP 147 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-~-----~~~~~~l~v~~~-~~~~~~~~~~~-~~~~~~~-~~~ 147 (236)
.|+.+..........|.|.+++.+|+|.|.|.+.+.. + ......|.|... ..........+ ...+.+. .+.
T Consensus 88 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~ 167 (291)
T 2gki_A 88 GKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPS 167 (291)
T ss_dssp TTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCS
T ss_pred CCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCC
Confidence 4554433222245789999999999999999998763 1 112345666510 00000000000 0122222 344
Q ss_pred cEEEecCCeEEEEeEEeeCCCCC----CeEEEeecC--eE---Eeeec------CCCceEEEeecCcceEEEEEEcccCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPP----AYIFWNHNE--AI---ISYDS------QRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~----~~v~W~~~~--~~---~~~~~------~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
...+.+|+++.|.|.+.+.+.|. +.+.|+++. .. +.... ...+....... ...+|.|.+++.
T Consensus 168 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~ 244 (291)
T 2gki_A 168 SLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSG---TDFTLTISSVQA 244 (291)
T ss_dssp EEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCG
T ss_pred EEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecC---CEEEEEECCCCH
Confidence 67789999999999998774221 289999863 21 11100 01233322211 345799999999
Q ss_pred CCCeEEEEEeCCCC----CceEEEEE
Q psy10361 213 SDNGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 213 ~d~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|+|.|.|.|.|.. |....|.|
T Consensus 245 ~DsG~Y~C~a~~~~~~~fg~gt~l~v 270 (291)
T 2gki_A 245 EDLAVYYCKQSYYHMYTFGSGTKLEI 270 (291)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred HHCEEEEEEEccCCceEEcCCEEEEE
Confidence 99999999999864 44445544
No 187
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.55 E-value=5.3e-14 Score=103.74 Aligned_cols=123 Identities=19% Similarity=0.231 Sum_probs=81.3
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCC-C-ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEecCCeE-EEEeEE-e
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTP-H-QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIENGSTI-NLTCVV-R 164 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~-~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~-~l~C~~-~ 164 (236)
+.|.|.+++.+|+|.|+|.+.+.. + ....+.|.|. ..| ..+.+. .+....+..|+.+ .|.|.+ .
T Consensus 77 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~p-~~~~~~~~~~~~~~~~g~~~~~l~C~~~~ 145 (231)
T 2pet_A 77 GRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVF----------AKP-EATEVSPNKGTLSVMEDSAQEIATCNSRN 145 (231)
T ss_dssp CCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEE----------BCC-CCCEEEECCSSCCTTCCSEEEEEEEEEEE
T ss_pred ceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEE----------ecC-CCcEEecCCcceeecCCCceEEEEEEeEC
Confidence 349999999999999999998865 3 3366677776 222 222222 2334455678887 999999 7
Q ss_pred eCCCCCCeEEEeecCeEEeeecC-CCceEEEee-----cC-cceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQ-RGGVNVITE-----KG-ETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~-----~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+. |.+.+.|++++..+..... ..+...... .+ ....+.|.|.....+|.|.|+|.|.|.
T Consensus 146 ~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 146 GN--PAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EB--SCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cc--cCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 88 4459999999988754321 112222111 11 112256888755566699999999994
No 188
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.55 E-value=5.2e-13 Score=106.04 Aligned_cols=180 Identities=16% Similarity=0.210 Sum_probs=106.9
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEeccee----------------------------EE------ec
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRDI----------------------------HL------LT 67 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~----------------------------~~------~~ 67 (236)
+.|+.+.. ...+.+|.|.+++.+|+|.|.|.+.+..+... .+ .+
T Consensus 51 ~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p 128 (389)
T 2jll_A 51 DGRIEVKG--QHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNP 128 (389)
T ss_dssp SSSEEEEE--CSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEES
T ss_pred CCeEEEec--cCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecC
Confidence 56777665 34578999999999999999999876322110 00 01
Q ss_pred ceeeEEecCCcEEEEcC-------CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCC
Q psy10361 68 TGRYTYTNDQRFRVINN-------PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEP 139 (236)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-------~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~ 139 (236)
...+.|.+++....... .......|.|.+++.+|+|.|+|.|.|..+.. ....+.+. ..|.+
T Consensus 129 ~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~----------~~P~~ 198 (389)
T 2jll_A 129 PASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALA----------DVPSS 198 (389)
T ss_dssp CCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEEC----------CCCCC
T ss_pred CCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEec----------CCCCC
Confidence 22456665543211000 01134679999999999999999999988654 44444443 11211
Q ss_pred cccccCCCcEEEecCCeEEEEeEEeeC--CCCCC--eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 140 ETDIIGGPEVFIENGSTINLTCVVRFS--PEPPA--YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~l~C~~~~~--p~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
+..+ ......+..+.|.|..... ..|.. .+.|...+.... ... .... ....+.|.++...+.
T Consensus 199 P~~~----~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~-------~~~-~~~~--~~~~~~i~~l~~~~~ 264 (389)
T 2jll_A 199 PYGV----KIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIW-------KIV-RSHG--VQTMVVLNNLEPNTT 264 (389)
T ss_dssp CEEE----EEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCC-------EEE-ECST--TCSEEEECSCCTTCE
T ss_pred Ccce----EEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCccc-------EEe-eccC--CcceEEECCccCCCE
Confidence 1010 1122345678888874221 11221 466776653110 001 1111 113689999999999
Q ss_pred eEEEEEeCCCCC
Q psy10361 216 GKYQCNPANSQA 227 (236)
Q Consensus 216 G~y~C~a~n~~g 227 (236)
+.|.|.|.|..|
T Consensus 265 y~~~v~A~N~~G 276 (389)
T 2jll_A 265 YEIRVAAVNGKG 276 (389)
T ss_dssp EEEEEEEEESSC
T ss_pred EEEEEEEEcCCc
Confidence 999999999987
No 189
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.55 E-value=2.2e-13 Score=102.47 Aligned_cols=136 Identities=18% Similarity=0.191 Sum_probs=80.7
Q ss_pred CCcEEEEEcCCCCCCCEEEEEEeecCCC----ceeEEEEEEEEEEeeCCcc----cccCCCcccccCCCcEEEecCCeEE
Q psy10361 87 SDDWTLQLKYPQHKDTGIYECQVSTTPH----QAHYIYLTVVVLVINDGKY----LLVPEPETDIIGGPEVFIENGSTIN 158 (236)
Q Consensus 87 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~l~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (236)
.....|.|.+++.+|+|.|.|.+.+..+ ......|.|........+. ............+....+.+|+++.
T Consensus 76 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~ 155 (259)
T 3omz_A 76 RKNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVT 155 (259)
T ss_dssp -CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEE
T ss_pred CCeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEE
Confidence 3567899999999999999999988653 2244566666100000000 0000011223334568889999999
Q ss_pred EEeEEeeCCCCCCeEEEeecCe--EEe---eec------CCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 159 LTCVVRFSPEPPAYIFWNHNEA--IIS---YDS------QRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 159 l~C~~~~~p~p~~~v~W~~~~~--~~~---~~~------~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
|.|.+.+.. |.+.+.|++... .+. ... ..++..... +.......|.|.+++.+|+|.|.|.+.+
T Consensus 156 L~C~~~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 156 LNCLYETSW-WSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNF-KKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp ECCEEECCC-SSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECC-BGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred EEEECCCcc-CCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEE-cCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 999887642 446999998531 111 000 012222211 1111234699999999999999999964
No 190
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.54 E-value=3.8e-14 Score=104.40 Aligned_cols=140 Identities=16% Similarity=0.188 Sum_probs=86.9
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-------ceeEEEEEEEEEEeeCCcccccCCCccccc-CCC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-------QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGP 147 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~ 147 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...|.+. .++
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~i~~~~~ 134 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVS----------SGSASAPTLFPLVS 134 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEEC----------SSCCBCCEEEEEEC
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEc----------cCCCCCCEEEEecC
Confidence 357776543333567999999999999999999988642 1133466665 1111112221 111
Q ss_pred cEEEecCCeEEEEeEEeeC-CCCCCeEEEee-cCeEEeeecCCCceEEEeecCcceEEEEEEcccCC--CCCeEEEEEeC
Q psy10361 148 EVFIENGSTINLTCVVRFS-PEPPAYIFWNH-NEAIISYDSQRGGVNVITEKGETTVSYLLIQKARP--SDNGKYQCNPA 223 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~d~G~y~C~a~ 223 (236)
...+..|+.+.|.|.+.+. |. +..+.|++ ++..+...... ... .........+.|.|..... +|.|.|+|.|.
T Consensus 135 ~~~~~~g~~v~L~C~~~g~~P~-p~~v~W~~~~g~~l~~~~~~-~~~-~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~ 211 (223)
T 1dee_B 135 CENSNPSSTVAVGCLAQDFLPD-SITFSWKYKNNSDISSTRGF-PSV-LRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQ 211 (223)
T ss_dssp TTCCCSSSEEEEEEEEEEEBSS-CCEEEEEETTSCBCSCEEEC-CCE-EETTEEEEEEEEEEECTTTTSTTCCEEEEEEE
T ss_pred CcccCCCCcEEEEEEEEEEeCC-CeEEEeEccCCCccceeEEC-Ccc-ccCCeEEEEEEEEEcHHHhccCCCCEEEEEEE
Confidence 1123578999999999876 42 24999999 87765320000 000 0111122345788877766 78899999999
Q ss_pred CCCCc
Q psy10361 224 NSQAK 228 (236)
Q Consensus 224 n~~g~ 228 (236)
|..+.
T Consensus 212 n~~~~ 216 (223)
T 1dee_B 212 HPNGN 216 (223)
T ss_dssp CTTCC
T ss_pred eCCCC
Confidence 99974
No 191
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.54 E-value=1.4e-13 Score=104.10 Aligned_cols=154 Identities=19% Similarity=0.283 Sum_probs=90.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCC------------cc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEP------------ET 141 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~------------~~ 141 (236)
+.|+.... ......|.|.+++.+|+|.|.|.+.+.... .....|.|.....+..| ..|+. ..
T Consensus 78 ~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p--~~pp~~~~~~~~~~~~~~v 153 (268)
T 1x9q_A 78 PDRFSGSG--SGTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKK--DAAKKDDAKKDDAKKDGGV 153 (268)
T ss_dssp CTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC--------------------------CGGGC
T ss_pred cccEEEEc--CCCEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCc--cccccccccccccccccce
Confidence 34565542 124678999999999999999999886432 23456666521000000 00000 01
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEe---ee-------------cCCCceEEEeecCcceEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIIS---YD-------------SQRGGVNVITEKGETTVS 203 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~---~~-------------~~~~~~~~~~~~~~~~~~ 203 (236)
.+..+....+.+|+++.|.|.+.+.+.+.+.+.|+++. ..+. .. ...++.....+. .....
T Consensus 154 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~ 232 (268)
T 1x9q_A 154 KLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDD-SKSSV 232 (268)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEG-GGTEE
T ss_pred EEECCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeC-CCCEE
Confidence 22223456788999999999998874223589999852 2211 00 112334433221 11345
Q ss_pred EEEEcccCCCCCeEEEEEeCCCC----CceEEEEE
Q psy10361 204 YLLIQKARPSDNGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 204 ~L~i~~v~~~d~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|.|.+++.+|+|.|.|.+.|.. |....|.|
T Consensus 233 ~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~Gt~L~V 267 (268)
T 1x9q_A 233 YLQMNNLRVEDTGIYYCTGASYGMEYLGQGTSVTV 267 (268)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEECCCCHHHCEEEEEEEccCCccEECCCEEEEe
Confidence 79999999999999999998752 45555544
No 192
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.54 E-value=7.3e-15 Score=113.45 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=76.4
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee-
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF- 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~- 165 (236)
....|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. ..+..+..+....+..|+.+.|.|.+.+
T Consensus 59 ~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~-------------~~~~~~~~~~~~~~~~g~~~~l~c~~~~~ 125 (317)
T 2y25_A 59 GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE-------------AFKELMMEVCKKIALSATDLKIQSTAEGI 125 (317)
T ss_dssp CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTH-------------HHHHHHHHHHHHHHTCBCCCEEEECSSEE
T ss_pred CeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEe-------------cCccccccCCceecccCCCeEEEeecccc
Confidence 45789999999999999999999876543 22222222 1100111111122234455555555444
Q ss_pred ---------CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 ---------SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ---------~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. |.+.+.|++++..+.. ..+....... ....|.|.++..+|.|.|+|.|.|..|
T Consensus 126 ~l~c~~~~~~--p~~~i~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g 188 (317)
T 2y25_A 126 QLYSFVTYYV--EDLKVNWSHNGSAIRY---SDRVKTGVTG---EQIWLQINEPTPNDKGKYVMELFDGKT 188 (317)
T ss_dssp EEEEEBSSCC--SSCEEEEEESSSBCCC---CSSEEEEECS---SEEEEEEESCCGGGCEEEEEEEECSSC
T ss_pred EEEEEeccCC--CCcEEEEEECCEECCC---CCCeEEeccC---CEEEEEECcCCcccCeeEEEEEEeCCc
Confidence 4 5569999999987743 1233332222 235799999999999999999999987
No 193
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.53 E-value=2.7e-14 Score=106.55 Aligned_cols=144 Identities=15% Similarity=0.141 Sum_probs=86.3
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-----ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-----QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (236)
+|+.+... .....+|.|.+++.+|+|.|.|.+.+... ......|.|.. ...... .+...+..+....+
T Consensus 65 ~r~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~~-~P~i~~~~~~~~~~ 137 (246)
T 4dzb_B 65 DKFLINHA-SLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLE-----DLKNVF-PPEVAVFEPSEAEI 137 (246)
T ss_dssp GGEEEEEE-ETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEES-----CGGGCB-CCEEEEECCCHHHH
T ss_pred CcEEEEec-CCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEec-----CCCccc-CCceEeecCCchhc
Confidence 45655432 12467899999999999999999986432 22445666650 000000 11111222333334
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEE-----eecCcceEEEEEEcccCCCC-CeEEEEEeCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVI-----TEKGETTVSYLLIQKARPSD-NGKYQCNPANS 225 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~d-~G~y~C~a~n~ 225 (236)
..|+.+.|.|.+.+.|.|+..+.|++++..+............ .+......+.|.|.....+| .|.|+|.|.|.
T Consensus 138 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~ 217 (246)
T 4dzb_B 138 SHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 217 (246)
T ss_dssp HHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred cCCCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEec
Confidence 5689999999999875223489999999887431100000000 01112233568888888888 99999999988
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
..
T Consensus 218 ~~ 219 (246)
T 4dzb_B 218 GL 219 (246)
T ss_dssp CB
T ss_pred CC
Confidence 63
No 194
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.53 E-value=1.3e-13 Score=102.87 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=86.2
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC-----CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP-----HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFI 151 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (236)
+|+.+... .....+|.|.+++.+|+|.|.|.+.+.. .......|.|.. ..... ..+...+..+....+
T Consensus 64 ~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~-~~p~~~~~~~~~~~~ 136 (245)
T 4ei6_B 64 DQFSVERP-DGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLE-----DLKNV-FPPEVAVFEPSEAEI 136 (245)
T ss_dssp TTEEEECC-TTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEES-----CGGGC-BCCEEEEECCCHHHH
T ss_pred CCEEEEec-cCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEec-----ccCCC-CCceEEEeCCCcccc
Confidence 67776643 2356799999999999999999998521 122445666650 00000 011112222333334
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEE-----eecCcceEEEEEEcccCCCC-CeEEEEEeCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVI-----TEKGETTVSYLLIQKARPSD-NGKYQCNPANS 225 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~d-~G~y~C~a~n~ 225 (236)
..|+.+.|.|.+.+.+.++..+.|++++..+............ .+......+.|.|.....+| .|.|+|.|.|.
T Consensus 137 ~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~ 216 (245)
T 4ei6_B 137 SHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (245)
T ss_dssp HHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred cCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEEC
Confidence 5689999999998853122389999999887431100000000 01112233568888888878 89999999987
Q ss_pred C
Q psy10361 226 Q 226 (236)
Q Consensus 226 ~ 226 (236)
.
T Consensus 217 ~ 217 (245)
T 4ei6_B 217 G 217 (245)
T ss_dssp C
T ss_pred C
Confidence 5
No 195
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.53 E-value=1.3e-14 Score=112.43 Aligned_cols=155 Identities=10% Similarity=0.172 Sum_probs=95.7
Q ss_pred CCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEE-cCCCCCcEEEEEcCCCCCCCEEEEEEeecCC------Ccee
Q psy10361 45 HKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVI-NNPTSDDWTLQLKYPQHKDTGIYECQVSTTP------HQAH 117 (236)
Q Consensus 45 ~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~------~~~~ 117 (236)
.++.-...|.+... ...+.|.+++..... .........|.|.+++.+|+|.|+|.+.+.. ..+.
T Consensus 37 ~G~~v~L~C~~~~~---------~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~ 107 (316)
T 3vh8_G 37 RGGHVTLRCHYRHR---------FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSN 107 (316)
T ss_dssp TTSCEEEEEEBTTB---------CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCC
T ss_pred CCCCEEEEEEccCC---------CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCC
Confidence 56777777876432 123445544432110 0011235679999999999999999997532 1235
Q ss_pred EEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeec
Q psy10361 118 YIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEK 197 (236)
Q Consensus 118 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 197 (236)
.+.|.|. .+.+.+.+...+...+.+|+++.|.|.+.+ +++.+.|++++..+...... ... .
T Consensus 108 ~~~l~V~-----------~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~---~~~~~~w~k~g~~~~~~~~~--~~~---~ 168 (316)
T 3vh8_G 108 PVVIMVT-----------GNHRKPSLLAHPGPLVKSGERVILQCWSDI---MFEHFFLHKEGISKDPSRLV--GQI---H 168 (316)
T ss_dssp CEEEEEE-----------CSSCCCEEEEESCSEEETTCCEEEEEEESS---CCSEEEEEETTCCSCCEEEE--CEE---E
T ss_pred cEEEEEe-----------cCCCCCeEEecCCCccCCCCeEEEEEcCCC---CCcEEEEEECCCccccceee--eee---c
Confidence 5667776 111222332222234789999999999953 34589999998765321100 000 0
Q ss_pred CcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 198 GETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 198 ~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.......|.|.++..+|+|.|+|.|.|..|
T Consensus 169 ~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 198 (316)
T 3vh8_G 169 DGVSKANFSIGPMMLALAGTYRCYGSVTHT 198 (316)
T ss_dssp TTEEEEEEEECSCCGGGCEEEEEEEECTTC
T ss_pred CCCceEEEEECCCChhhCceEEEEEecCCC
Confidence 011335799999999999999999999876
No 196
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.52 E-value=3.4e-14 Score=109.45 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=83.5
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE-e
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV-R 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~ 164 (236)
.+.+|.|.+++.+|+|.|+|.+.+.... .....+.+. .++..+.+..+.......|+.+.|.|.+ .
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~-----------~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~ 140 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVL-----------VEPTVSLIKGPDSLIDGGNETVAAICIAAT 140 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE-----------BCCEEEEEECSSCCCTTCSCEEEEEEEEEE
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEee-----------eccccccccccceeEEcCCceEEEEEEecC
Confidence 4568999999999999999999886433 244555555 2222223333334444568899999976 5
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+. |.+.+.|++++..+.... ...........+.|.|..+..+|.|.|+|.|.|..|
T Consensus 141 g~--P~~~i~W~~~~~~~~~~~-----~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 196 (308)
T 4fom_A 141 GK--PVAHIDWEGDLGEMESTT-----TSFPNETATIISQYKLFPTRFARGRRITCVVKHPAL 196 (308)
T ss_dssp EB--SCCEEEECCCSSBCCEEE-----EECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred Cc--CCceEEEEECCccccccc-----ceeeeecccccccceEEeeeecCCccEEEEEEccCC
Confidence 77 456999999987664321 001111122345799999999999999999999876
No 197
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.52 E-value=3.4e-14 Score=104.78 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=86.8
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC---------ceeEEEEEEEEEEeeCCcccccCCCcccc--c
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH---------QAHYIYLTVVVLVINDGKYLLVPEPETDI--I 144 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~---------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~--~ 144 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...|.+ .
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~v~~~ 134 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVS----------PASTKGPSVFPL 134 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEE----------SCSCBCCEEEEE
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecc----------cCCCcCCeEEEe
Confidence 457776543334567999999999999999999988642 1134567776 111111221 1
Q ss_pred CCCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
.+.. .+..|+.+.|.|.+.+. |. +..+.|++++..+...... .. ...+......+.|.|..+..+| |.|+|.|.
T Consensus 135 ~~~~-~~~~g~~v~L~C~~~g~~P~-p~~v~W~~~~~~~~~~~~~-~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~ 209 (225)
T 1op3_H 135 APSS-KSTSGGTAALGCLVKDYFPE-PVTVSWNSGALTSGVHTFP-AV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVN 209 (225)
T ss_dssp CCCT-TCCCCCEEEEEEEEEEEBSS-CCEEECCTTSCCTTCEECC-CE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEE
T ss_pred cccc-cccCCCcEEEEEEEEeEECC-CeEEEEecCCCcCCeEecC-ce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEE
Confidence 2221 24579999999999876 42 2499999988653110000 01 1111112344679999998888 99999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..+
T Consensus 210 n~~~ 213 (225)
T 1op3_H 210 HKPS 213 (225)
T ss_dssp EGGG
T ss_pred cCCC
Confidence 9875
No 198
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.52 E-value=7.1e-14 Score=103.95 Aligned_cols=143 Identities=15% Similarity=0.129 Sum_probs=85.7
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeec--CC--CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEe
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVST--TP--HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIE 152 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~--~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (236)
+|+.+... .....+|.|.+++.+|+|.|.|.+.+ .. .......|.|.. .... ...+...+..+....+.
T Consensus 63 ~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~-----~~~~-~~~p~~~~~~~~~~~~~ 135 (240)
T 3q5y_A 63 SRFSVQQF-DDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLE-----DLRN-VTPPKVSLFEPSKAEIA 135 (240)
T ss_dssp TTEEEEEC-TTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEES-----CGGG-CBCCEEEEECCCHHHHH
T ss_pred CeEEEEeC-CCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEec-----cccC-CCCCeeEEeCCchhhcc
Confidence 56666543 33577999999999999999999973 21 122345566650 0000 00111111222333344
Q ss_pred cCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCC-CeEEEEEeCCCC
Q psy10361 153 NGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSD-NGKYQCNPANSQ 226 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d-~G~y~C~a~n~~ 226 (236)
.|+.+.|.|.+.+.+.++..+.|++++..+..............++ ....+.|.|.....+| .|.|+|.|.|..
T Consensus 136 ~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~ 211 (240)
T 3q5y_A 136 NKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHG 211 (240)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECC
T ss_pred cCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCC
Confidence 6899999999988421223799999998874311100001122222 2334568899988888 779999999875
No 199
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.52 E-value=1.4e-13 Score=107.81 Aligned_cols=116 Identities=23% Similarity=0.176 Sum_probs=83.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCC-CcccccCCCcEEEecCCeEEEEeEE---
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPE-PETDIIGGPEVFIENGSTINLTCVV--- 163 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~l~C~~--- 163 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. ..+. ..+.+..+....+..|+.+.|.|.+
T Consensus 78 ~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 147 (349)
T 4dep_C 78 KDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVV----------QKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDG 147 (349)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE----------CCCTTSCCSCCCCEEEEETTCSEEEEECCSCTT
T ss_pred CCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEe----------cCCcccCcccccCcceeeecCccEEEEcCCCcc
Confidence 3479999999999999999999876543 56677776 1111 0111122335577899999999975
Q ss_pred --eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 164 --RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 164 --~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
.+. |.+.+.|++++..+.. . ....... ..|.|.++..+|+|.|+|.|.|..
T Consensus 148 ~~~g~--p~~~v~W~k~~~~l~~---~--~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 148 YFPSS--VKPTITWYMGCYKIQN---F--NNVIPEG-----MNLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp SSCTT--SCCEEEEEETTEECCS---C--SSEEEET-----TEEEEESCCGGGCEEEEEEEEEEE
T ss_pred cccCC--CCceEEEeeCCEECCC---c--cceeecC-----CEEEEeeeeecCCcEEEEEEEEee
Confidence 555 5569999999987732 1 2222223 279999999999999999999987
No 200
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.52 E-value=4.6e-14 Score=105.27 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=83.8
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecC-----CC--ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTT-----PH--QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEV 149 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~-----~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (236)
+|+.+... .....+|.|.+++.+|+|.|.|.+.+. .. ......|.|.. ...... .+...+..+...
T Consensus 62 ~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~-----~~~~~~-~P~v~~~~~~~~ 134 (245)
T 3nfj_J 62 QNLSASRP-QDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVE-----DLNKVF-PPEVAVFEPSEA 134 (245)
T ss_dssp CSSEEEEE-ETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEES-----CGGGCB-CCEEEEEECCHH
T ss_pred CcEEEEec-CCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEc-----ccCCCC-CCceEeecCCcc
Confidence 45554432 134678999999999999999999882 21 22445666660 000000 011111112222
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEE-----eecCcceEEEEEEcccCCCC-CeEEEEEeC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVI-----TEKGETTVSYLLIQKARPSD-NGKYQCNPA 223 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~d-~G~y~C~a~ 223 (236)
.+..|+.+.|.|.+.+.+.++..+.|++++..+............ .+......+.|.|.....+| .|.|+|.|.
T Consensus 135 ~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~ 214 (245)
T 3nfj_J 135 EISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 214 (245)
T ss_dssp HHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEE
T ss_pred cccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEE
Confidence 234589999999998853233478999999887431100000000 11112234578888888777 679999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|...
T Consensus 215 ~~~~ 218 (245)
T 3nfj_J 215 FYGL 218 (245)
T ss_dssp ECCB
T ss_pred ECCC
Confidence 8753
No 201
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.52 E-value=6.9e-14 Score=103.32 Aligned_cols=137 Identities=19% Similarity=0.229 Sum_probs=83.7
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC----------ceeEEEEEEEEEEeeCCcccccCCCccccc-C
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH----------QAHYIYLTVVVLVINDGKYLLVPEPETDII-G 145 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~----------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~ 145 (236)
+|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...|.+. .
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~i~~~ 136 (228)
T 3bae_H 67 SRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVS----------SAKTTAPSVYPL 136 (228)
T ss_dssp GGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEEC----------SCCCBCCEEEEE
T ss_pred CcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEec----------CCCCCCCEEEEe
Confidence 56666543333468999999999999999999987542 1123566665 1111122221 1
Q ss_pred CCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
++...+..|+.+.|.|.+.+. |. +..+.|++++..+.... .......+.....+.|.|..+..+| |.|+|.|.|
T Consensus 137 ~~~~~~~~g~~~~l~C~~~g~~P~-p~~v~W~~~~~~~~~~~---~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n 211 (228)
T 3bae_H 137 APVCGDTTGSSVTLGCLVKGYFPE-PVTLTWNSGSLSSGVHT---FPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAH 211 (228)
T ss_dssp CC-----CCSEEEEEEEEEEEBSS-CCEEEEGGGTCCTTEEE---EEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEE
T ss_pred cccccccCCCCEEEEEEEccEeCC-CEEEEEeeCCcccCceE---cCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEE
Confidence 222335689999999999875 43 24999999876431100 0011111112234578998888766 999999999
Q ss_pred CCCc
Q psy10361 225 SQAK 228 (236)
Q Consensus 225 ~~g~ 228 (236)
..+.
T Consensus 212 ~~~~ 215 (228)
T 3bae_H 212 PASS 215 (228)
T ss_dssp GGGT
T ss_pred CCCC
Confidence 9874
No 202
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.52 E-value=1.6e-13 Score=101.63 Aligned_cols=140 Identities=14% Similarity=0.197 Sum_probs=83.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEee--cC--C---CceeEEEEEEEEEEeeCCcccccCCCcccccC-CC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVS--TT--P---HQAHYIYLTVVVLVINDGKYLLVPEPETDIIG-GP 147 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~--~~--~---~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~-~~ 147 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+. +. . .......|.|. ..+...+.+.. .+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~v~~~~p 133 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVS----------SGSASAPTLFPLVS 133 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEEC----------SSCCBCCEEEEEEC
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEc----------cCCCCCCceEEecc
Confidence 46777654333356799999999999999999998 32 1 11234567776 11111122211 11
Q ss_pred cEEEecC-CeEEEEeEEeeC-CCCCCeEEEee-cCeEEeeecCCCceEEEeecCcceEEEEEEcccCC--CCCeEEEEEe
Q psy10361 148 EVFIENG-STINLTCVVRFS-PEPPAYIFWNH-NEAIISYDSQRGGVNVITEKGETTVSYLLIQKARP--SDNGKYQCNP 222 (236)
Q Consensus 148 ~~~~~~g-~~~~l~C~~~~~-p~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~--~d~G~y~C~a 222 (236)
...+..| +.+.|.|.+.+. |. +..+.|++ ++..+...... ... .........+.|.|..... +|.|.|+|.|
T Consensus 134 ~~~~~~g~~~v~L~C~~~g~~P~-p~~v~W~~~~g~~l~~~~~~-~~~-~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v 210 (232)
T 1dn0_B 134 CENSPSDTSSVAVGCLAQDFLPD-SITFSWKYKNNSDISSTRGF-PSV-LRGGKYAATSQVLLPSKDVMAGTDEHVVCKV 210 (232)
T ss_dssp C------CCSEEEEEEEEEEBSS-CCEEEEEETTSCEECCEEEC-CCE-EETTEEEEEEEEEECTTCC---CCCEEEEEE
T ss_pred ccccCCCCCcEEEEEEEEEEeCC-CeEEEEEcCCCCceeeEEEC-Ccc-ccCCcEEEEEEEEEcHHHhcccCCCeEEEEE
Confidence 1233467 899999999875 43 24999999 88776320000 000 1111122346788888876 7899999999
Q ss_pred CCCCCc
Q psy10361 223 ANSQAK 228 (236)
Q Consensus 223 ~n~~g~ 228 (236)
.|..+.
T Consensus 211 ~n~~~~ 216 (232)
T 1dn0_B 211 QHPNGN 216 (232)
T ss_dssp ECTTCC
T ss_pred EeCCCC
Confidence 999973
No 203
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.51 E-value=3.8e-13 Score=103.91 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=79.3
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe-
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR- 164 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~- 164 (236)
.+.+|.|.+++.+|+|.|+|.+.+..... ..+.|.+. ..+..........+..++.+.+.|.+.
T Consensus 77 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~-------------~~P~~~~~~~~~~~~~~~~~~~~C~~~~ 143 (313)
T 4fqp_A 77 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL-------------AKPQNTAEVQKVQLTGEPVPMARCVSTG 143 (313)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCB-------------BCCEEEEEECCBCCCSSCEEEEEEEEEE
T ss_pred cceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeec-------------cCCcceecccceEeecCceEEEEEEccC
Confidence 45679999999999999999986544333 44444444 111111122233455678889999875
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+. |.+.+.|++++..+.... .......+.....+.|.|.....+|+|.|+|.|.|..+
T Consensus 144 ~~--P~~~i~W~~~~~~~~~~~---~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 201 (313)
T 4fqp_A 144 GR--PPAQITWHSDLGGMPNTS---QVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESF 201 (313)
T ss_dssp EB--SCCEEEEEETTCCEEEEE---EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTS
T ss_pred cc--CCcEEEeecCCccccccc---eeeeecccccccceeeeecccccccCeeEEEEEEccCc
Confidence 56 456999999987664321 11101111122345788999999999999999999875
No 204
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.51 E-value=8.2e-14 Score=104.74 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=78.1
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCC------CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEe
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTP------HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTC 161 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C 161 (236)
....|.|.+++.+|+|.|+|.+.+.. ..+..+.|.|. .....+.+...+...+.+|++++|.|
T Consensus 60 ~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~-----------~~~~~P~l~~~p~~~V~~G~~vtL~C 128 (257)
T 1b6u_A 60 SKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVIT-----------GLYEKPSLSAQPGPTVLAGESVTLSC 128 (257)
T ss_dssp EEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEE-----------CSSCCCEEECSSCTTCBTTCEEEEEE
T ss_pred ceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecc-----------cCCCCcceEccCCCccCCCCEEEEEE
Confidence 45789999999999999999997531 12355677776 11122333322223568999999999
Q ss_pred EEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 162 VVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 162 ~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.+.+. + +.+.|++++..+...... .. ...+ .....|.|.+++ |+|.|+|.|.|.
T Consensus 129 ~~~~~--~-~~~~w~k~g~~~~~~~~~--~~--~~~~-~~~~~l~I~~v~--D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 129 SSRSS--Y-DMYHLSREGEAHERRFSA--GP--KVNG-TFQADFPLGPAT--HGGTYRCFGSFR 182 (257)
T ss_dssp ECSSC--C-SEEEEEETTSSCEECCBC--BC--CSSS-CCBEEEEEEECC--SCEEEEEEEECS
T ss_pred eCCCC--C-cEEEEEECCcccCccccc--cc--ccCC-ceeEEEEecccc--cCEEEEEEEEcC
Confidence 98764 3 489999998766432110 00 0000 113479999998 999999999875
No 205
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.51 E-value=1.8e-13 Score=103.53 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=86.3
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecC--C-CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEec
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTT--P-HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIEN 153 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~--~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (236)
+|+.+... .....+|.|.+++.+|+|.|+|.+.+. . .......|.|.. ...... .+...+..+....+..
T Consensus 88 ~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~~~~~-~P~v~~~~~~~~~~~~ 160 (268)
T 3pl6_D 88 DRFFAVRP-EGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLE-----DLKNVF-PPEVAVFEPSEAEISH 160 (268)
T ss_dssp TTEEEECT-TSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEES-----CGGGCB-CCEEEEECCCHHHHHH
T ss_pred CcEEEEec-CCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEec-----Cccccc-CCceEEeCCCcccccC
Confidence 56766643 345789999999999999999999873 2 122445666660 000000 1111122233333446
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEE----E-eecCcceEEEEEEcccCCCC-CeEEEEEeCCCC
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNV----I-TEKGETTVSYLLIQKARPSD-NGKYQCNPANSQ 226 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~L~i~~v~~~d-~G~y~C~a~n~~ 226 (236)
|+.+.|.|.+.+.+.++..+.|++++..+........... . .+......+.|.|.....+| .|.|+|.|.|..
T Consensus 161 g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~ 239 (268)
T 3pl6_D 161 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYG 239 (268)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECC
T ss_pred CCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCC
Confidence 8999999999986423338999999987742100000000 0 11112233567888887777 999999999875
No 206
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.51 E-value=1.7e-15 Score=112.13 Aligned_cols=127 Identities=11% Similarity=0.118 Sum_probs=67.9
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEecCCeEEEEeEEee
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIENGSTINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~ 165 (236)
...|.|.+++.+|+|.|.|.+.+..+. .....|.|. .+...+.+. .++......|+.+.|.|.+.+
T Consensus 92 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g 160 (233)
T 3bqu_C 92 DFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIK-----------RADAAPTVSIFPPSSEQLTSGGASVVCFLNN 160 (233)
T ss_dssp EEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC--------------CCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred EEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEe-----------CCCCCCEEEEeCCCHHhhcCCceEEEEEEcc
Confidence 347999999999999999999876532 223345555 111111211 111111236899999999998
Q ss_pred CCCCCCeEEEeecCeEEeee-cCCCceEEEeec-CcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 166 SPEPPAYIFWNHNEAIISYD-SQRGGVNVITEK-GETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 166 ~p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.++..+.|++++..+... ....... ...+ .....+.|.|.....+|.|.|+|.|.|...
T Consensus 161 ~~p~~~~v~W~k~g~~~~~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 161 FYPKDINVKWKIDGSERQNGVLNSWTDQ-DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EBSSCEEEEEEEC-----CCEEEEECCC-CTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred ccCCceEEEEEECCeeCCCCceEecCCc-cCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 53122379999999876431 0000000 0011 122446789999999999999999999864
No 207
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.51 E-value=1.6e-13 Score=101.30 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=82.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC--ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEe
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH--QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIE 152 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 152 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+... ......|.|. ..+...+.+. ..+...+.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~----------~~~~~~P~v~~~~~~~~~~ 134 (227)
T 1mju_H 65 KNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVS----------AAKTTAPSVYPLAPVCGDT 134 (227)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEC----------SSCCBCCEEEEECCCC---
T ss_pred CCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEc----------CCCCCCCEEEEecCCcccc
Confidence 457776543334568999999999999999999987632 1233466665 1111112221 11222456
Q ss_pred cCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 153 NGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 153 ~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|+.+.|.|.+.+. |. +..+.|++++..+...... ... ........+.|.|..+..+| |.|+|.|.|..+
T Consensus 135 ~g~~v~L~C~~~g~~P~-p~~v~W~~~g~~~~~~~~~-~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 205 (227)
T 1mju_H 135 SGSSVTLGCLVKGYFPE-PVTLTWNSGSLSSGVHTFP-AVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 205 (227)
T ss_dssp ---CEEEEEEEEEEBSS-CCEEEEGGGTBCTTEEECC-CEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGG
T ss_pred CCCcEEEEEEeecEeCC-CeEEEEecCCCcCCcEECC-cee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCC
Confidence 79999999999875 42 2499999998654211111 111 11112234679999988878 999999999775
No 208
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.50 E-value=3.9e-13 Score=104.46 Aligned_cols=133 Identities=17% Similarity=0.255 Sum_probs=86.3
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEe-ecCCC-ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEec
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQV-STTPH-QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIEN 153 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~-~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (236)
.+|+.+. .......+|.|.+++.+|+|.|+|.+ .+..+ ....+.|.|. .++............+.+
T Consensus 79 ~~r~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----------~~p~~~~~~~~~~~~~~~ 146 (331)
T 3u83_A 79 RERVEFL-RPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVM-----------AKPTNWIEGTQAVLRAKK 146 (331)
T ss_dssp TTTEEES-SCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-----------BCCEEEEEECSSCEEECT
T ss_pred CCceEec-ccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEe-----------cCCcceeecCCCceeecC
Confidence 3455544 22334667999999999999999985 44333 3366777777 211111222345677788
Q ss_pred C---CeEEEEeE-EeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 154 G---STINLTCV-VRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 154 g---~~~~l~C~-~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| +.+.|.|. ..+. |.+.+.|++++...... ......++ ....+.|.|..+..+|.|.|+|.|.|..|
T Consensus 147 g~~~~~~~l~C~~~~~~--p~~~i~W~~~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 218 (331)
T 3u83_A 147 GQDDKVLVATCTSANGK--PPSVVSWETRLKGEAEY-----QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMD 218 (331)
T ss_dssp TCCCCEEEEEEEEEEEB--SCCEEEEEESSCCEEEE-----EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTE
T ss_pred CCccceEEEEEEecCCc--CCceEEEEcCCCCcccc-----ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCC
Confidence 8 78999998 7787 44599999853222110 00011111 12235789999999999999999999987
No 209
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=5.3e-13 Score=87.61 Aligned_cols=84 Identities=20% Similarity=0.158 Sum_probs=64.3
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+..|+++.|.|.+.+.| .+.+.|++++..+.. ..++.+.... ....|.|.++..+|+|.|+|.|.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~~~g~p--~p~i~W~k~~~~~~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 12 QFPEDQKVRAGESVELFGKVTGTQ--PITCTWMKFRKQIQE---SEHMKVENSE---NGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCCCSEEEETTCCEEEEEEEESSS--SCEEEEEESSSBCCC---SSSEEEEECS---SEEEEEETTCCTTTCEEEEEEEE
T ss_pred eCCCCeEEeCCCeEEEEEEEEcCC--CCEEEEEECCEECcC---CCCEEEEEcC---CEEEEEECCCChhcCEEEEEEEE
Confidence 345578899999999999999984 459999999987743 1234433222 24589999999999999999999
Q ss_pred CCCC---ceEEEEEc
Q psy10361 224 NSQA---KSVMVNVL 235 (236)
Q Consensus 224 n~~g---~~~~~~v~ 235 (236)
|..| ..+.|.|.
T Consensus 84 N~~g~~~~~~~l~V~ 98 (114)
T 2cqv_A 84 NKLGSRQAQVNLTVV 98 (114)
T ss_dssp CSSCEEECCEEEEEE
T ss_pred ECCCcEEEEEEEEEE
Confidence 9998 45566654
No 210
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.50 E-value=5.6e-14 Score=103.12 Aligned_cols=138 Identities=21% Similarity=0.276 Sum_probs=85.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc----eeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ----AHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+..+. .....|.|. ..+...|.+. .++...
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~~ 136 (220)
T 1pz5_B 67 KGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVS----------SATTTAPSVYPLVPGCS 136 (220)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEEC----------SSCCBCCEEEEECCCSC
T ss_pred CCcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEc----------cCCCCCCeEEEcccccc
Confidence 3566654332224568999999999999999999886421 134566665 1111112221 121223
Q ss_pred EecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 151 IENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+.+|+.+.|.|.+.+. |.| ..+.|++++......... ... ........+.|.|..+..+| |.|+|.|.|..|.
T Consensus 137 ~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~~~~~~~~~-~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 210 (220)
T 1pz5_B 137 DTSGSSVTLGCLVKGYFPEP-VTVKWNYGALSSGVRTVS-SVL--QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASK 210 (220)
T ss_dssp CSCSSSEEEEEEEEEEBSSC-CEEEEGGGTCCTTEEECC-CEE--ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred cCCCCcEEEEEEEEEEeCCC-eEEEEecCCcccceEEcC-Ccc--cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence 4679999999999886 432 399999987631000000 000 11111234679999888866 9999999999983
No 211
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.50 E-value=2.4e-13 Score=102.01 Aligned_cols=137 Identities=18% Similarity=0.264 Sum_probs=83.7
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC----C-ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEE
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP----H-QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVF 150 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~----~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (236)
+|+.+.........+|.|.+++.+|+|.|.|.+.+.. . ......|.|. ..+...+.+. .+....
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~~ 135 (253)
T 3liz_H 66 GRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVS----------AAKTTPPSVYPLAPGSA 135 (253)
T ss_dssp TTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEEC----------SSCCBCCEEEEECC---
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEe----------ccCCCCCeEEEecCCcc
Confidence 5666554333356789999999999999999998752 1 1233456664 0111222222 223334
Q ss_pred EecCCeEEEEeEEee-CCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 151 IENGSTINLTCVVRF-SPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~-~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+..|+.+.|.|.+.+ .|. +..+.|++++..+..... ... .........+.|.|.....+| |.|+|.|.|..+.
T Consensus 136 ~~~g~~v~L~C~~~g~~P~-~~~v~W~~~~~~~~~~~~--~~~-~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 136 AQTNSMVTLGCLVKGYFPE-PVTVTWNSGSLSSGVHTF--PAV-LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 209 (253)
T ss_dssp ---CCEEEEEEEEEEEBSS-CCEEEEGGGTBCTTEEEC--CCE-EETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGT
T ss_pred cCCCCcEEEEEEEeeEeCC-CeEEEEEeCCeecceEeC--Ccc-ccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCC
Confidence 557999999999988 532 248999998863311110 001 111212234689999999999 9999999999873
No 212
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.50 E-value=5.4e-14 Score=102.87 Aligned_cols=134 Identities=21% Similarity=0.236 Sum_probs=76.5
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-----ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-----QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEV 149 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (236)
.+|+.+.. ......|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...+.+. .++..
T Consensus 63 ~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~ 130 (215)
T 3nl4_H 63 KGRFTISK--TSTTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVS----------SGQPKAPSVFPLAPCC 130 (215)
T ss_dssp TTTEEEEE--CSSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEEC----------SSCCBCCEEEEECCCT
T ss_pred cCCEEEEe--eCCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEe----------CCCcCCCEEEEecCCc
Confidence 45666554 33567899999999999999999988643 2234456664 1111122221 12222
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcc-eEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGET-TVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
.+..|+.+.|.|.+.+.+.+...+.|++++..+...... . ....++.. ..+.| .+...| |.|+|.|.|..+.
T Consensus 131 ~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~--~-~~~~~g~~~~~s~l---~v~~~d-g~ytC~v~~~~~~ 203 (215)
T 3nl4_H 131 GDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFP--S-VRQSSGLYSLSSVV---SVTSSS-QPVTCNVAHPATN 203 (215)
T ss_dssp TCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC--C-EECTTSCEEEEEEE---EECC----CCEEEEEEGGGT
T ss_pred cccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecC--c-eECCCCCEEEEEEE---EEeccC-CEEEEEEEeCCCC
Confidence 345699999999998864234578899988644221111 1 11222211 11223 455667 9999999999874
No 213
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=3.4e-13 Score=86.17 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=63.1
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+..|+++.|.|.+.+.| .+.+.|++++..+... .+........ ...+|.|.++..+|+|.|+|.|.
T Consensus 10 ~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~k~g~~~~~~---~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 10 ERIQSQTVGQGSDAHFRVRVVGKP--DPECEWYKNGVKIERS---DRIYWYWPED--NVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp ECCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCCC---SSEEEEEEET--TEEEEEECSCCGGGCEEEEEEEE
T ss_pred ecCcceEEcCCCcEEEEEEEEEeC--CCEEEEEECCEECCCC---CCEEEEEcCC--CEEEEEECCCCcCCCEEEEEEEE
Confidence 345567889999999999999984 4599999999887532 2222221111 34579999999999999999999
Q ss_pred CCCC---ceEEEEEc
Q psy10361 224 NSQA---KSVMVNVL 235 (236)
Q Consensus 224 n~~g---~~~~~~v~ 235 (236)
|..| .++.|.|.
T Consensus 83 N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQ 97 (99)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCcEEEEEEEEEe
Confidence 9998 34455553
No 214
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.49 E-value=4.2e-14 Score=110.82 Aligned_cols=140 Identities=15% Similarity=0.203 Sum_probs=87.3
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEec
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIEN 153 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (236)
..|+.+..........|.|.+++.+|+|.|+|.+.+.... .....|.|. ..+...+.+. .++...+..
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~~~~~ 134 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVS----------SASTKGPSVFPLAPSSKSTS 134 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEEC----------SSCCBCCEEEEECCSCTTTS
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEe----------cCCCCCCeEEEccccccccC
Confidence 3566665433335678999999999999999999885422 244566665 1111111221 111223468
Q ss_pred CCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 154 GSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 154 g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|+.+.|.|.+.+.+.+++.+.|++++..+...... .....+......+.|.|..+..+| |.|+|.|.|..+.
T Consensus 135 g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~--~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 135 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP--AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 206 (344)
T ss_dssp SSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECC--CEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGT
T ss_pred CCcEEEEEEEeeEECCCeEEEEecCCccCceeECC--CeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 99999999998862122599999998653211100 000111112234579999888878 9999999999874
No 215
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=3.6e-13 Score=100.32 Aligned_cols=143 Identities=15% Similarity=0.185 Sum_probs=86.8
Q ss_pred cCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC------C--ceeEEEEEEEEEEeeCCcccccCCCcccccCC
Q psy10361 75 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP------H--QAHYIYLTVVVLVINDGKYLLVPEPETDIIGG 146 (236)
Q Consensus 75 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
.++|+.+..........|.|.+++.+|+|.|.|.+.+.. . ......|.|.. .+.....++.+.+..+
T Consensus 65 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~-----~~~~~~~~p~~~v~~p 139 (242)
T 1hxm_B 65 PSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITD-----KQLDADVSPKPTIFLP 139 (242)
T ss_dssp CTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEES-----SCCCSCCSCBCCCCCC
T ss_pred cCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcc-----cccCCCcCCCceEECC
Confidence 346777654333356789999999999999999998752 1 12345677761 0000000122223223
Q ss_pred CcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCe-EEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 147 PEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEA-IISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
....+..|+.+.|.|.+.+. |. .+.+.|++++. .+.... ..... ..+......+.|.|..... + |.|+|.|.|
T Consensus 140 ~~~~~~~g~~v~L~C~~~g~~P~-~~~v~W~~~~~~~l~~~~-~~~~~-~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n 214 (242)
T 1hxm_B 140 SIAETKLQKAGTYLCLLEKFFPD-VIKIHWEEKKSNTILGSQ-EGNTM-KTNDTYMKFSWLTVPEKSL-D-KEHRCIVRH 214 (242)
T ss_dssp CGGGGGSSSCEEEEEEEEEESSC-CEEEEEEESSSCCCCCCE-ECCCE-ECSSSEEEEEEEEECTGGG-G-SCEEEEEEE
T ss_pred ChhhcccCCCceEEEEEeeEECC-CeEEEEEcCCCEeecCcc-cccee-cCCCcEEEEEEEEEccccC-C-CEEEEEEEe
Confidence 32334569999999999876 32 36899999986 442211 01111 1222223446788887765 4 999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..+
T Consensus 215 ~~~ 217 (242)
T 1hxm_B 215 ENN 217 (242)
T ss_dssp TTS
T ss_pred CCC
Confidence 986
No 216
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=1.4e-13 Score=93.51 Aligned_cols=84 Identities=20% Similarity=0.372 Sum_probs=63.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC----------------------------eEEeeecCCCceEEEeec
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE----------------------------AIISYDSQRGGVNVITEK 197 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~----------------------------~~~~~~~~~~~~~~~~~~ 197 (236)
+..+.+..|+++.|.|.+.|.| .|.+.|++++ ..+.. ...++.+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P--~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~r~~i~~~~ 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDP--APTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCE--TEGRVRVETTK 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBS--CCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCS--CSSSCEEEEET
T ss_pred CCCEEEeCCCeEEEEEEEEEcC--CCeEEEEECCcccccccccccccccccccccccccccceeecC--CCCeEEEEeCC
Confidence 4578899999999999999995 4599999998 22211 11233333222
Q ss_pred CcceEEEEEEcccCCCCCeEEEEEeCCCCC---ceEEEEEcC
Q psy10361 198 GETTVSYLLIQKARPSDNGKYQCNPANSQA---KSVMVNVLN 236 (236)
Q Consensus 198 ~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~~ 236 (236)
..+.|.|.++..+|+|.|+|.|.|..| .++.|.|+|
T Consensus 101 ---~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~d 139 (139)
T 1gxe_A 101 ---DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVID 139 (139)
T ss_dssp ---TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred ---CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEEC
Confidence 245799999999999999999999999 455677765
No 217
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.47 E-value=5.4e-13 Score=85.37 Aligned_cols=84 Identities=25% Similarity=0.356 Sum_probs=62.6
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+..|+++.|.|.+.+.| .+.+.|++++..+.... ...... ..+ ....|.|.++..+|+|.|+|.|.|
T Consensus 11 ~p~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~g~~~~~~~-~~~~~~-~~~---~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 11 VPENMSIDEGRFCRMDFKVSGLP--APDVSWYLNGRTVQSDD-LHKMIV-SEK---GLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp CCCCEEEETTCCEEEEEECEEES--CCEEEEEETTEEECCCS-SSCEEE-ETT---TEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEecCCCEEEEEEEEEeeC--CCEEEEEECCEECcCCC-cEEEEE-cCC---CeEEEEECCCCcccCEEEEEEEEc
Confidence 34567889999999999999984 45999999998875422 112221 122 235799999999999999999999
Q ss_pred CCC---ceEEEEEc
Q psy10361 225 SQA---KSVMVNVL 235 (236)
Q Consensus 225 ~~g---~~~~~~v~ 235 (236)
..| .++.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 84 RAGEATFTVQLDVL 97 (100)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEE
Confidence 998 44455554
No 218
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=6.3e-13 Score=85.09 Aligned_cols=82 Identities=24% Similarity=0.346 Sum_probs=62.7
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+..|+++.|.|.+.+.| .+.+.|++++..+.... .+... ..++ +|.|.++..+|.|.|+|.|.
T Consensus 13 ~~p~~~~v~~G~~~~l~C~~~g~p--~p~v~W~~~~~~~~~~~--~~~~~-~~~~-----~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 13 QGPANQTLAVDGTALLKCKATGDP--LPVISWLKEGFTFPGRD--PRATI-QEQG-----TLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp ECCCCEEEESSSEEEECCEEECSS--CCEEEEEESSSEESSSC--SSCEE-CTTC-----CEEEESCCTTTCCEEEEEEE
T ss_pred eCcCCEEEcCCCcEEEEEEEEEcC--CCEEEEEECCEECCCCC--CCEEE-cCCC-----EEEEccCCcccCEEEEEEEE
Confidence 345577889999999999999984 45899999998875221 22222 2232 69999999999999999999
Q ss_pred CCCC---ceEEEEEc
Q psy10361 224 NSQA---KSVMVNVL 235 (236)
Q Consensus 224 n~~g---~~~~~~v~ 235 (236)
|..| .++.|.|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 83 SSSGETSWSAVLDVT 97 (100)
T ss_dssp CSSCCCBCCEEEEEE
T ss_pred cCCCCEEEEEEEEEe
Confidence 9998 45566664
No 219
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.47 E-value=5.7e-13 Score=85.10 Aligned_cols=83 Identities=19% Similarity=0.245 Sum_probs=62.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+..|+++.|.|.+.+.| .+.+.|++++..+.... .+....... ...+|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~k~~~~~~~~~--~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~N~ 84 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEP--KPVVSWLRNRQPVRPDQ--RRFAEEAEG---GLCRLRILAAERGDAGFYTCKAVNE 84 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEES--CCEEEEEETTEECCCBT--TEEEEECGG---GEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCceEecCCCEEEEEEEEEEcC--CCEEEEEECCEECCCCC--CEEEEECCC---CEEEEEEccCCcCCCEEEEEEEEEC
Confidence 4567889999999999999985 45999999998875422 122222222 3457999999999999999999999
Q ss_pred CC---ceEEEEEc
Q psy10361 226 QA---KSVMVNVL 235 (236)
Q Consensus 226 ~g---~~~~~~v~ 235 (236)
.| .++.|.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 85 YGARQCEARLEVR 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCceeEEEEEEEE
Confidence 98 34455553
No 220
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.46 E-value=1.3e-12 Score=109.29 Aligned_cols=123 Identities=22% Similarity=0.308 Sum_probs=84.0
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce--eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCC-eEEEEeEEee
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA--HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGS-TINLTCVVRF 165 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~ 165 (236)
+++|.|.+++.+|+|.|+|.+.+..+.. ..+.|.|. .++..+.+...... +..++ .+.|.|.+.+
T Consensus 431 ~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~-----------~~~~~p~i~~~~~~-~~~~~~~~~l~C~~~~ 498 (581)
T 3o3u_N 431 NGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVY-----------QIPGKPEIVDSASE-LTAGVPNKVGTCVSEG 498 (581)
T ss_dssp TSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE-----------BCCCCCEEESCCSE-ECTTSCEEEEEEEEEE
T ss_pred CceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEE-----------cCCCCCEEEcCCcc-cccCCceeEEEEECCC
Confidence 3479999999999999999999877544 56777776 22334444444333 44454 4567999987
Q ss_pred -CCCCCCeEEEeecCeEEeeecCCCceEEE----e--ecC-cceEEEEEEcccCCCC-CeEEEEEeCCCCC
Q psy10361 166 -SPEPPAYIFWNHNEAIISYDSQRGGVNVI----T--EKG-ETTVSYLLIQKARPSD-NGKYQCNPANSQA 227 (236)
Q Consensus 166 -~p~p~~~v~W~~~~~~~~~~~~~~~~~~~----~--~~~-~~~~~~L~i~~v~~~d-~G~y~C~a~n~~g 227 (236)
.| .+.+.|++++..+.... .+.... . +.+ ....++|.|..+..+| .|.|+|.|.|..+
T Consensus 499 ~~P--~~~i~W~~~g~~l~~~~--~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 499 SYP--AGTLSWHLDGKPLVPNE--KGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp EBS--CCEEEEEETTEECCTTS--TTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred CCC--CCeEEEEECCEECCCCC--CeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 54 45999999998875422 122111 1 112 3445789999998555 7899999999974
No 221
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.46 E-value=5.8e-13 Score=99.08 Aligned_cols=139 Identities=16% Similarity=0.178 Sum_probs=84.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC--------------ceeEEEEEEEEEEeeCCcccccCCCcc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH--------------QAHYIYLTVVVLVINDGKYLLVPEPET 141 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--------------~~~~~~l~v~~~~~~~~~~~~~~~~~~ 141 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...+
T Consensus 72 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~----------~~~~~~P 141 (239)
T 3tv3_H 72 KSRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVS----------SASTKGP 141 (239)
T ss_dssp GGGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEEC----------CCCCBCC
T ss_pred cCCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeec----------cCCCcCC
Confidence 357766544334567899999999999999999975421 1122345554 0111222
Q ss_pred ccc-CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEE
Q psy10361 142 DII-GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQC 220 (236)
Q Consensus 142 ~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C 220 (236)
.+. .++...+..|+.+.|.|.+.+.+.++..+.|++++..+...... .....+......+.|.|......| |.|+|
T Consensus 142 ~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~--~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC 218 (239)
T 3tv3_H 142 SVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP--AVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 218 (239)
T ss_dssp EEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC--CEECTTSCEEEEEEEEEEGGGTTT-CCCEE
T ss_pred EEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecC--ceECCCCCEEEEEEEEEchhhcCC-CEEEE
Confidence 222 12222344699999999998843233468999988643211110 111112222344678899988888 99999
Q ss_pred EeCCCCC
Q psy10361 221 NPANSQA 227 (236)
Q Consensus 221 ~a~n~~g 227 (236)
.+.|..+
T Consensus 219 ~v~h~~~ 225 (239)
T 3tv3_H 219 NVNHKPS 225 (239)
T ss_dssp EEEEGGG
T ss_pred EEEECCC
Confidence 9999885
No 222
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.46 E-value=1.4e-12 Score=84.72 Aligned_cols=94 Identities=14% Similarity=0.214 Sum_probs=62.7
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCC-CCCeEEEeecCeEEeeecCCCceEEEe--e-cCcceEEEEEEcccCCCCCeE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPE-PPAYIFWNHNEAIISYDSQRGGVNVIT--E-KGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~~~v~W~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~L~i~~v~~~d~G~ 217 (236)
++..+..+.+..|+++.|.|.+.+.|. ..+.+.|++++..........+..+.. . ........|.|.+++.+|+|.
T Consensus 7 f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 86 (108)
T 3cx2_A 7 FVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGS 86 (108)
T ss_dssp CSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEE
T ss_pred EEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEE
Confidence 444566788999999999999998843 115999999873221111111222211 1 111234689999999999999
Q ss_pred EEEEeCCCCC---ceEEEEEc
Q psy10361 218 YQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 218 y~C~a~n~~g---~~~~~~v~ 235 (236)
|.|.|.|..| .++.|.|.
T Consensus 87 Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 87 YRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEecCCCceEEEEEEEEe
Confidence 9999999998 34556553
No 223
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.46 E-value=7.1e-14 Score=101.70 Aligned_cols=127 Identities=13% Similarity=0.138 Sum_probs=76.1
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
..|.|.+++.+|+|.|+|.+.+..+.. ....+.+.. ....+ +...+...... ...|+.+.|.|.+.+.+.
T Consensus 68 ~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~-------~~~~~-P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P 138 (207)
T 2vol_A 68 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK-------GRPKA-PQVYTLPPPKE-QMAKDKVSLTCMITDFFP 138 (207)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCC-------CCCBC-CEEEEECCCTG-GGSSSEEEEEEEEEEEBS
T ss_pred EEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCC-------CCCcC-CeEEEeCCCHH-HhcCCceEEEEEEeeEEC
Confidence 479999999999999999999876532 112221100 00011 11111111111 124889999999998532
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
++..+.|++++..+..... .... ...++ ....+.|.|.....+|.|.|+|.|.|...
T Consensus 139 ~~~~v~W~k~g~~l~~~~~-~~~~-~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 139 EDITVEWESNGQPAENYKN-TQPI-MDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp SCCEEEEEETTEECSCEEE-CCCE-ECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCCEEEEEECCEeccCccc-CCce-ECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 3358999999987642111 1111 12222 23345677777777789999999999874
No 224
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.46 E-value=4e-13 Score=101.67 Aligned_cols=141 Identities=15% Similarity=0.161 Sum_probs=83.5
Q ss_pred cEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC-----CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEe
Q psy10361 78 RFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP-----HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIE 152 (236)
Q Consensus 78 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (236)
|+..... .....+|.|.+++.+|+|.|.|.+.+.. .......|.|.. ...... .+...+..+....+.
T Consensus 90 r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~~-~P~v~~~~~~~~~~~ 162 (270)
T 3qib_D 90 RFSAECP-SNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE-----DLKNVF-PPEVAVFEPSEAEIS 162 (270)
T ss_dssp HEEEECC-TTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEES-----CSTTCB-CCEEEEEECCHHHHH
T ss_pred cEEEEeC-CCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcc-----cccccc-CCceEEECCCccccc
Confidence 6665542 3457899999999999999999998632 122345666660 000000 011111112222334
Q ss_pred cCCeEEEEeEEeeCCCCC-CeEEEeecCeEEeeecCCCceEE----E-eecCcceEEEEEEcccCCCC-CeEEEEEeCCC
Q psy10361 153 NGSTINLTCVVRFSPEPP-AYIFWNHNEAIISYDSQRGGVNV----I-TEKGETTVSYLLIQKARPSD-NGKYQCNPANS 225 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~-~~v~W~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~L~i~~v~~~d-~G~y~C~a~n~ 225 (236)
.|+.+.|.|.+.+.+ |. ..+.|++++..+........... . .+......+.|.|.....+| .|.|+|.+.|.
T Consensus 163 ~g~~v~L~C~~~g~~-P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~ 241 (270)
T 3qib_D 163 HTQKATLVCLATGFY-PDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 241 (270)
T ss_dssp HHSEEEEEEEEEEEB-SSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEEC
T ss_pred cCCceEEEEEeccee-CCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEec
Confidence 589999999998832 33 38999999988743110000000 0 11112233578888887777 99999999987
Q ss_pred C
Q psy10361 226 Q 226 (236)
Q Consensus 226 ~ 226 (236)
.
T Consensus 242 ~ 242 (270)
T 3qib_D 242 G 242 (270)
T ss_dssp C
T ss_pred C
Confidence 5
No 225
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.45 E-value=3.6e-13 Score=99.60 Aligned_cols=139 Identities=15% Similarity=0.216 Sum_probs=85.1
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC-------C--ceeEEEEEEEEEEeeCCcccccCCCccccc-C
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP-------H--QAHYIYLTVVVLVINDGKYLLVPEPETDII-G 145 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-------~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~ 145 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+.. . ......|.|. ..+...+.+. .
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~v~~~ 134 (230)
T 3n9g_H 65 QGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVS----------SASTKGPSVFPL 134 (230)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEEC----------SSCCBCCEEEEE
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEE----------ecCCCCCEEEec
Confidence 46777765555567889999999999999999998743 1 1133456664 1111122222 1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.+...+..|+.+.|.|.+.+.+.+...+.| ++..+.............+......+.|.|.....+| |.|+|.+.|.
T Consensus 135 ~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~ 211 (230)
T 3n9g_H 135 APSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 211 (230)
T ss_dssp CCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEG
T ss_pred CCCccccCCCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEEC
Confidence 222234579999999999885412457999 4433321000000111111222344689999999889 9999999998
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.+
T Consensus 212 ~~ 213 (230)
T 3n9g_H 212 PS 213 (230)
T ss_dssp GG
T ss_pred CC
Confidence 86
No 226
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.45 E-value=9.8e-13 Score=83.04 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=62.1
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+....+.+|+++.|.|.+.+. ++.+.|++++..+... .++.+.... ...+|.|.++..+|+|.|+|.|
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~v~~~---~~~v~W~k~g~~i~~~---~~~~i~~~g---~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 9 EKPLYGVEVFVGETAHFEIELSEP---DVHGQWKLKGQPLAAS---PDCEIIEDG---KKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp EECCCCEEEETTSCEEEEEEESSS---SCCCEEEETTEECCCB---TTEEEEEET---TEEEEEECSCCGGGCEEEEEEE
T ss_pred eccCcceEEeCCCCEEEEEEECCC---CCeEEEEECCEECcCC---CCEEEEEEC---CEEEEEECCCChhhCEEEEEEE
Confidence 344567889999999999999753 2489999999988542 244443332 2357999999999999999999
Q ss_pred CCCCCceEEEEEc
Q psy10361 223 ANSQAKSVMVNVL 235 (236)
Q Consensus 223 ~n~~g~~~~~~v~ 235 (236)
.|.. .++.|.|.
T Consensus 80 ~n~~-~sa~L~V~ 91 (93)
T 1waa_A 80 ANTK-SAANLKVK 91 (93)
T ss_dssp TTEE-EEEEEEEE
T ss_pred CCCc-EEEEEEEE
Confidence 9976 34555553
No 227
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.45 E-value=9.8e-13 Score=98.40 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=82.4
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC-----------------------CceeEEEEEEEEEEeeCCc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP-----------------------HQAHYIYLTVVVLVINDGK 132 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~-----------------------~~~~~~~l~v~~~~~~~~~ 132 (236)
.+|+.+.........+|.|.+++.+|+|.|.|.+.+.. .......|.|.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~-------- 135 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVS-------- 135 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEEC--------
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEc--------
Confidence 35777654433456789999999999999999997631 11123455554
Q ss_pred ccccCCCccccc-CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccC
Q psy10361 133 YLLVPEPETDII-GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 133 ~~~~~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
..+...+.+. .++...+..|+.+.|.|.+.+.+.+...+.|++++..+...... .....+......+.|.|....
T Consensus 136 --~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~--~~~~~~g~~~~~s~L~i~~~~ 211 (248)
T 3u2s_H 136 --SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP--AVLQSSGLYSLSSVVTVPSSS 211 (248)
T ss_dssp --SCCCBCCEEEEECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC--CEECTTSCEEEEEEEEEEGGG
T ss_pred --ccCCCCCEEEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecC--ceECCCCCEEEEEEEEEChhh
Confidence 1111222222 22333345689999999998753124589999988543211110 111112222344678888888
Q ss_pred CCCCeEEEEEeCCCCC
Q psy10361 212 PSDNGKYQCNPANSQA 227 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~g 227 (236)
..| |.|+|.+.|..+
T Consensus 212 ~~~-~~ytC~v~h~~~ 226 (248)
T 3u2s_H 212 LGT-QTYICNVNHKPS 226 (248)
T ss_dssp BTT-BCCEEEEEEGGG
T ss_pred cCC-CeEEEEEEECCC
Confidence 888 999999999875
No 228
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.45 E-value=1.1e-12 Score=84.36 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=62.4
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+.| .+.+.|++++..+... .+....... ...+|.|.++..+|.|.|+|.|.|
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~g~p--~p~i~W~k~~~~~~~~---~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 14 RMRSHRVPCGQNTRFILNVQSKP--TAEVKWYHNGVELQES---SKIHYTNTS---GVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp CCCCEEEETTCCEEEEEEEEEES--CCEEEEEETTEECCCC---SSEEEEEET---TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcceEEeCCCeEEEEEEEEecC--CCEEEEEECCEECCCC---CCEEEEECC---CEEEEEEcCCCcccCEEEEEEEEe
Confidence 34567889999999999999984 4599999999887542 233333322 235799999999999999999999
Q ss_pred CCC---ceEEEEE
Q psy10361 225 SQA---KSVMVNV 234 (236)
Q Consensus 225 ~~g---~~~~~~v 234 (236)
..| ..+.|.|
T Consensus 86 ~~G~~~~~~~l~V 98 (103)
T 3qp3_A 86 YKGEASDYATLDV 98 (103)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 998 3344444
No 229
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.45 E-value=8.7e-14 Score=107.47 Aligned_cols=115 Identities=17% Similarity=0.203 Sum_probs=82.6
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCccccc-C---CCcEEEecCCeEEEEeEE-
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDII-G---GPEVFIENGSTINLTCVV- 163 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~g~~~~l~C~~- 163 (236)
..|.|.+++.+|+|.|+|.+.+..+.. ..+.+.+. ...+.+. . .....+..|+++.|.|.+
T Consensus 62 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~-------------~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~ 128 (315)
T 1itb_B 62 EKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV-------------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYM 128 (315)
T ss_dssp SBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEE-------------CCCTTSSSCGGGEEEEEEETTSCEEEECSSC
T ss_pred CeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEe-------------CCCCCcccccccccceEEecCCCeEEEEecc
Confidence 479999999999999999999876433 34444444 1111111 1 123567889999999998
Q ss_pred -----eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC-CCCCc
Q psy10361 164 -----RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA-NSQAK 228 (236)
Q Consensus 164 -----~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~-n~~g~ 228 (236)
.+. |.+.+.|++++..+.... .+ .....+ .|.|.++..+|+|.|+|.|. |..|.
T Consensus 129 ~~~~~~g~--p~~~i~W~k~~~~l~~~~--~~--~~~~~~-----~L~i~~v~~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 129 EFFKNENN--ELPKLQWYKDCKPLLLDN--IH--FSGVKD-----RLIVMNVAEKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp TTTCTTTT--CCCCCEEEETTEECCCCS--SS--EEEETT-----EEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred cccccCCC--CCCEEEEEECCEECCCcc--ce--EeecCc-----eEEEEeceehhCcEEEEEEEcCCCCc
Confidence 676 455999999998875321 12 222333 79999999999999999999 78774
No 230
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.45 E-value=1e-12 Score=95.07 Aligned_cols=125 Identities=10% Similarity=0.008 Sum_probs=82.4
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
....|.|.+++.+|+|.|.|.+.+..+.. ..+.|+|. .++..+.+. +. .+..|+.+ |.|.+.+.
T Consensus 57 ~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~-----------~~P~~~~i~-~~--~~~~g~~~-l~C~a~g~ 121 (210)
T 1gsm_A 57 GRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY-----------AFPNQLTVS-PA--ALVPGDPE-VACTAHKV 121 (210)
T ss_dssp SEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE-----------BCCSEEEEE-SS--SBCTTCCE-EEEEEEEE
T ss_pred CccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEE-----------ecCCCcEEc-cc--eEEeCCce-EEEEeCCC
Confidence 45689999999999999999999987554 67788887 222222222 21 45567888 99999885
Q ss_pred -CCC--CCeEEEeecCeEEeeecCCCceEEE--------eecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 -PEP--PAYIFWNHNEAIISYDSQRGGVNVI--------TEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 -p~p--~~~v~W~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.+ .+.+.|++++..+............ .......+++|.+......|.+.|+|.|.+.+-
T Consensus 122 ~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 122 TPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp BCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred CCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCC
Confidence 433 3589999999988421100000000 011223445666666666666899999999873
No 231
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.44 E-value=2.8e-12 Score=81.56 Aligned_cols=83 Identities=16% Similarity=0.265 Sum_probs=62.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.+ |.+.+.|++++..+.. ..+......+ ....|.|.++..+|.|.|.|.|.|.
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~-p~~~v~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYD-QSTQVTWYFGVRQLEN---SEKYEITYED---GVAILYVKDITKLDDGTYRCKVVND 80 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCC-TTCEEEEEETTEECCS---SSSEEEEEET---TEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CcCEEEcCCCcEEEEEEEeccC-CCCEEEEEECCEECcC---CCCEEEEEcC---CeEEEEEecCChhhCeEEEEEEECC
Confidence 4467889999999999999861 3349999999987743 2233332332 2458999999999999999999999
Q ss_pred CC---ceEEEEEc
Q psy10361 226 QA---KSVMVNVL 235 (236)
Q Consensus 226 ~g---~~~~~~v~ 235 (236)
.| ..+.|.|.
T Consensus 81 ~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 81 YGEDSSYAELFVK 93 (97)
T ss_dssp SCEEEEEEEEEET
T ss_pred CCeEeEEEEEEEE
Confidence 98 33455554
No 232
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.44 E-value=6.5e-13 Score=84.99 Aligned_cols=81 Identities=21% Similarity=0.382 Sum_probs=61.1
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
....+..|+++.|.|.+.+.| .+.+.|++++..+............... .+|.|.++..+|+|.|+|.|.|..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~v~~~D~G~Y~C~a~N~~ 88 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNP--MPTMRWLKNGKEFKQEHRIGGYKVRNQH-----WSLIMESVVPSDKGNYTCVVENEY 88 (100)
T ss_dssp CEEEECTTCCEEEECCEEEES--CCEEEEEETTEECCGGGSTTCCEEEGGG-----TEEEECSCCGGGCEEEEEEEEETT
T ss_pred cEEEecCCCEEEEEEEccccC--CCEEEEEECCEEcccccccccEEEecCe-----EEEEEccCCcCCCEEEEEEEEeCC
Confidence 457788999999999999984 4589999999887543222223333233 279999999999999999999999
Q ss_pred C---ceEEEEE
Q psy10361 227 A---KSVMVNV 234 (236)
Q Consensus 227 g---~~~~~~v 234 (236)
| .++.|.|
T Consensus 89 g~~~~~~~l~V 99 (100)
T 3caf_A 89 GSINHTYHLDV 99 (100)
T ss_dssp EEEEEEEEEEE
T ss_pred CEEEEEEEEEE
Confidence 8 3445555
No 233
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.44 E-value=3.6e-13 Score=85.05 Aligned_cols=72 Identities=19% Similarity=0.304 Sum_probs=56.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
+....+..|+.+.|.|.+.|.|. +.+.|++++ ..+.. ..... ... ....|.|.++..+|+|.|+|.|.
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~--p~i~W~k~~~~~~~~~---~~~~~--~~~---~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPD--PTATWTVGDSGAALAP---ELLVD--AKS---STTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSS--CEEEEECSTTTCBCST---TSEEE--EET---TEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCC--CEEEEEECCCCcccCC---cEEEE--ecC---CEEEEEECCCChhcCEEEEEEEE
Confidence 44678899999999999999954 599999998 66532 11111 111 23579999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 79 N~~G 82 (93)
T 1wit_A 79 NELG 82 (93)
T ss_dssp ETTE
T ss_pred cCCC
Confidence 9998
No 234
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.44 E-value=5.4e-13 Score=86.64 Aligned_cols=82 Identities=20% Similarity=0.388 Sum_probs=55.4
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
...+....+..|+++.|.|.+.+.| .+.+.|++++..+... .+........ .|.|.++..+|+|.|+|.|
T Consensus 14 ~~~~~~~~v~~G~~v~l~C~~~g~p--~p~i~W~~~~~~~~~~---~~~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a 83 (108)
T 3kvq_A 14 TGNLENQTTSIGESIEVSCTASGNP--PPQIMWFKDNETLVED---SGIVLKDGNR-----NLTIRRVRKEDEGLYTCQA 83 (108)
T ss_dssp BSCCCCEEEETTCCEEEECBCC------CCEEEEESSSBCCCB---TTEEEETTTT-----EEEECSCCGGGCEEEEEEE
T ss_pred ecCCCCeEEeCCCeEEEEEECcCcC--CCeEEEEECCeEcccC---CCeEEeCCCc-----EEEEeecCcccCEEEEEEE
Confidence 3345678889999999999999884 4589999999876431 2333333332 7999999999999999999
Q ss_pred CCCCCc---eEEEEE
Q psy10361 223 ANSQAK---SVMVNV 234 (236)
Q Consensus 223 ~n~~g~---~~~~~v 234 (236)
.|..|. ++.|.|
T Consensus 84 ~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 84 CSVLGCAKVEAFFII 98 (108)
T ss_dssp C----CEEEEEEEEE
T ss_pred EeCCCceEEEEEEEE
Confidence 999983 344444
No 235
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.43 E-value=7.8e-13 Score=96.74 Aligned_cols=136 Identities=20% Similarity=0.225 Sum_probs=80.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC----CceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP----HQAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+.. .......|.|. ..+...|.+. .++...
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~i~~~~~~~~ 133 (215)
T 1c5d_H 64 KSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVS----------SAQTTAPSVYPLAPGCG 133 (215)
T ss_dssp GGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEEC----------SSCCBCCCEEEECCCSS
T ss_pred cCcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEec----------CCCCCCCeEEeccCChh
Confidence 35676654333346789999999999999999998763 12234566665 1111112221 111122
Q ss_pred EecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 151 IENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+..|+.+.|.|.+.+. |. +..+.|++++..+.... ... ..........+.|. ....+| |.|+|.|.|..+.
T Consensus 134 ~~~g~~v~L~C~~~g~~P~-p~~v~W~~~g~~~~~~~--~~~-~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~ 205 (215)
T 1c5d_H 134 DTTSSTVTLGCLVKGYFPE-PVTVTWNSGALSSDVHT--FPA-VLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASS 205 (215)
T ss_dssp CCCCSSEEEEEEEEEEBSS-CCEEEEGGGTTCCSCCB--CCC-EEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGT
T ss_pred hccCCcEEEEEEEeeeEcC-CcEEEEccCCccCceEe--cCc-ccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCC
Confidence 4679999999999876 43 23999999886532111 011 11111111223344 444456 9999999999874
No 236
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.43 E-value=1.6e-12 Score=97.71 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=81.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC------------CceeEEEEEEEEEEeeCCcccccCCCcccc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP------------HQAHYIYLTVVVLVINDGKYLLVPEPETDI 143 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~------------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~ 143 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+.. .......|.|. ..+...+.+
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~i 157 (256)
T 3sob_H 88 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVS----------SASTKGPSV 157 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEEC----------SSCCBCCEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEe----------cCCCCCCEE
Confidence 35777654444456789999999999999999998642 11233456664 111122222
Q ss_pred c-CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 144 I-GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 144 ~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
. ..+...+..|+.+.|.|.+.+.+.++..+.| ++..+.............+......+.|.|.....+| |.|+|.+
T Consensus 158 ~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v 234 (256)
T 3sob_H 158 FPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNV 234 (256)
T ss_dssp EEECCC-----TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEE
T ss_pred EEECCCcccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEE
Confidence 2 1222345689999999999874312457999 4433311000000111111222344679999998889 9999999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.|..+
T Consensus 235 ~~~~~ 239 (256)
T 3sob_H 235 NHKPS 239 (256)
T ss_dssp EEGGG
T ss_pred EeCCC
Confidence 99885
No 237
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.43 E-value=4.9e-13 Score=86.64 Aligned_cols=85 Identities=19% Similarity=0.300 Sum_probs=64.4
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+....+.+|+++.|.|.+.+.| .+.+.|++++..+.. ..+....... ...+|.|.++..+|+|.|+|.|
T Consensus 18 ~~~p~~~~v~~G~~v~L~C~~~g~p--~p~v~W~k~g~~l~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a 89 (106)
T 1nct_A 18 LTKPRSMTVYEGESARFSCDTDGEP--VPTVTWLRKGQVLST---SARHQVTTTK---YKSTFEISSVQASDEGNYSVVV 89 (106)
T ss_dssp EECCCCEEESSSSCEECCEEEECSS--CCBCCBCSSSSCCTT---CSSEEEEECS---SEEEEEECCCCSSCCSEEEECC
T ss_pred EECCCCEEEeCCCcEEEEEEEEEcC--CCEEEEEECCEECCC---CCCEEEEECC---CEEEEEECcCCchhCEEEEEEE
Confidence 3445678899999999999999985 459999999877642 2333333222 2358999999999999999999
Q ss_pred CCCCC---ceEEEEEc
Q psy10361 223 ANSQA---KSVMVNVL 235 (236)
Q Consensus 223 ~n~~g---~~~~~~v~ 235 (236)
.|..| .++.|.|.
T Consensus 90 ~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 90 ENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp BCSSCBCCEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEE
Confidence 99998 45566664
No 238
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.43 E-value=6.8e-13 Score=100.04 Aligned_cols=137 Identities=19% Similarity=0.236 Sum_probs=84.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC----ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH----QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVF 150 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+... ......|.|. ..+...+.+. .++...
T Consensus 71 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~----------~~~~~~P~v~~~~p~~~ 140 (261)
T 2xqy_G 71 KDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVS----------SAKTTAPSVYPLAPVCG 140 (261)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEEC----------SSCCBCCEEEEECCCCC
T ss_pred CCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEc----------cCCCCCCeEEEeCCCcc
Confidence 457766543223467899999999999999999988542 1133466665 1111111211 122223
Q ss_pred EecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 151 IENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+..|+.+.|.|.+.+. |. +..+.|++++..+...... .+ .........+.|.|..+..+| |.|+|.|.|...
T Consensus 141 v~~g~~v~L~C~~~g~~P~-~i~v~W~k~g~~~~~~~~~-~~--~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~ 213 (261)
T 2xqy_G 141 DTTGSSVTLGCLVKGYFPE-PVTLTWNSGSLSSGVHTFP-AV--LQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 213 (261)
T ss_dssp --CCSEEEEEEEEEEEBSS-CCEEEEGGGTCCTTEEECC-CE--EETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred ccCCCcEEEEEEEEeEeCC-CCEEEEecCCCcCceEecC-ce--ecCCcEEEEEEEEEeccccCC-CEEEEEEEECCC
Confidence 5679999999999875 42 2499999998654211111 11 111112234679998888878 999999999764
No 239
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.43 E-value=1.4e-12 Score=85.95 Aligned_cols=87 Identities=20% Similarity=0.441 Sum_probs=65.3
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
++..+....+.+|+++.|.|.+.+.| .+.+.|++++..+.... .++....... ...+|.|.++..+|+|.|+|.
T Consensus 18 f~~~p~~~~v~~G~~v~L~C~~~g~p--~p~v~W~k~~~~~~~~~--~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 18 FIYKPQSKKVLEGDSVKLECQISAIP--PPKLFWKRNNEMVQFNT--DRISLYQDNT--GRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp BSSCCCCEEEETTEEEEEEEEBCCBS--CCEEEEEETTEECCCCB--TTEEEEECTT--CEEEEEEEEECGGGCEEEEEE
T ss_pred EEeCCCcEEEeCCCcEEEEEEEeccC--CCEEEEEECCEECcCCC--CeEEEEeCCC--CeEEEEECCCCcccCEEEEEE
Confidence 44556678999999999999999885 45999999998875322 2344333322 345799999999999999999
Q ss_pred eCCCCC---ceEEEEE
Q psy10361 222 PANSQA---KSVMVNV 234 (236)
Q Consensus 222 a~n~~g---~~~~~~v 234 (236)
|.|..| ..+.|.|
T Consensus 92 a~N~~G~~~~~~~l~V 107 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDV 107 (116)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEE
Confidence 999998 3344544
No 240
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.43 E-value=1.6e-12 Score=83.73 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=57.6
Q ss_pred cCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC---ce
Q psy10361 153 NGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA---KS 229 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g---~~ 229 (236)
.+..+.|.|.+.|.|. +.+.|++++..+... ..................|.|.++..+|+|.|+|.|.|..| .+
T Consensus 15 ~~~~~~~~c~v~G~P~--P~i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPK--PALQWFYNGAILNES-KYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp CCCEEEEEEEEECSSC--CEEEEEETTEEECCC-SSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred ECcEEEEEEEEEEeCC--CEEEEEECCEECCCC-CcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 4778999999999954 599999999988542 11112222222233445799999999999999999999999 34
Q ss_pred EEEEEc
Q psy10361 230 VMVNVL 235 (236)
Q Consensus 230 ~~~~v~ 235 (236)
+.|.|.
T Consensus 92 ~~l~V~ 97 (103)
T 1wwb_X 92 ISAHFM 97 (103)
T ss_dssp EEECCS
T ss_pred EEEEEC
Confidence 455543
No 241
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=2.2e-12 Score=82.59 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=62.7
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+....+.+|+++.|.|.+ . |.+.+.|++++..+.. ..++.+.... ....|.|.++..+|+|.|+|.|
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~v--~--p~p~v~W~k~g~~l~~---~~r~~i~~~~---~~~~L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 11 LTPLTDQTVNLGKEICLKCEI--S--ENIPGKWTKNGLPVQE---SDRLKVVQKG---RIHKLVIANALTEDEGDYVFAP 80 (100)
T ss_dssp SBCCCCEEEETTSCCCEEEEC--S--SCCCEEEEETTEECCC---CSSEEEEECS---SEEEEEESSCCGGGCSEEEEEE
T ss_pred eccCCceEEcCCCCEEEEEEe--C--CCCeEEEEECCEECCC---CCcEEEEEeC---CEEEEEECCCChhhCEEEEEEE
Confidence 344567889999999999999 5 4458999999998853 2344443332 3457999999999999999999
Q ss_pred CCCCC-ceEEEEEc
Q psy10361 223 ANSQA-KSVMVNVL 235 (236)
Q Consensus 223 ~n~~g-~~~~~~v~ 235 (236)
.|... .++.|.|.
T Consensus 81 ~N~~~~~~a~L~V~ 94 (100)
T 2yuz_A 81 DAYNVTLPAKVHVI 94 (100)
T ss_dssp SSSCCCEEEEEEEE
T ss_pred cCCCeeEEEEEEEe
Confidence 99842 45566664
No 242
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=3.4e-12 Score=84.26 Aligned_cols=81 Identities=19% Similarity=0.325 Sum_probs=62.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.....+..|+++.|.|.+.+.|. +.+.|++++..+.. .+..+.... ....|.|.++..+|+|.|+|.|.|.
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~--p~i~W~k~g~~l~~----~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~N~ 101 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPR--PQVVWTKGGAPLDT----SRVHVRTSD---FDTVFFVRQAARSDSGEYELSVQIE 101 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESC--CEEEEEETTEECCC----SSCEEEECS---SEEEEEESSCCTTTCEEEEEEEECS
T ss_pred CCCEEEECCCEEEEEEEEccCCC--CEEEEEECCEECCC----CcEEEEECC---CeEEEEECCCChhcCEEEEEEEEeC
Confidence 34678899999999999999954 59999999988741 233332222 2357999999999999999999999
Q ss_pred CC---ceEEEEEc
Q psy10361 226 QA---KSVMVNVL 235 (236)
Q Consensus 226 ~g---~~~~~~v~ 235 (236)
.| ..+.|.|.
T Consensus 102 ~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 102 NMKDTATIRIRVV 114 (118)
T ss_dssp SCEECCEEEEEEE
T ss_pred CCeEEEEEEEEEE
Confidence 98 55566665
No 243
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.42 E-value=4.1e-12 Score=96.61 Aligned_cols=145 Identities=14% Similarity=0.132 Sum_probs=83.9
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-------ceeEEEEEEEEEEeeCCcccccCCCcccccCCCc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-------QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPE 148 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (236)
..|+.+... .....+|.|.+++.+|+|.|+|.+.+..+ ......|.|.. ...... ++...+..+..
T Consensus 87 ~~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~~-~P~v~~~~~~~ 159 (279)
T 2wbj_D 87 KDKFLINHA-SLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTE-----DLKNVF-PPEVAVFEPSE 159 (279)
T ss_dssp SSSEEEEEC-SSSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEES-----CGGGCB-CCEEEEEECCH
T ss_pred CCcEEEEeC-CCCEEEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEec-----CCCCCC-CCEEEEECCCc
Confidence 356666543 23567899999999999999999988321 12335677761 000000 01111111122
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEE----eecC-cceEEEEEEcccCCCC-CeEEEEEe
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVI----TEKG-ETTVSYLLIQKARPSD-NGKYQCNP 222 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~L~i~~v~~~d-~G~y~C~a 222 (236)
..+..|+.+.|.|.+.+.+.+.+.+.|++++..+............ ..++ ....+.|.|......| .|.|+|.|
T Consensus 160 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v 239 (279)
T 2wbj_D 160 AEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQV 239 (279)
T ss_dssp HHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEE
T ss_pred ccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEE
Confidence 2233689999999999863123699999999876421000000000 0111 2334568887777654 67899999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.|...
T Consensus 240 ~n~~~ 244 (279)
T 2wbj_D 240 QFYGL 244 (279)
T ss_dssp EECCB
T ss_pred EeCCC
Confidence 99864
No 244
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.42 E-value=2e-12 Score=82.44 Aligned_cols=75 Identities=23% Similarity=0.372 Sum_probs=59.4
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+..|+++.|.|.+.+.| .+.+.|++++..+.. ..+....... ...+|.|.++..+|+|.|+|.|.|
T Consensus 12 ~~~~~~v~~G~~~~l~C~~~g~p--~p~v~W~~~g~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 12 GLQDTTVSSDSVAKFAVKATGEP--RPTAIWTKDGKAITQ---GGKYKLSEDK---GGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CCCCEEEESSSCEEEEEEEEEES--CCEEEEEETTEECCS---SSSEEEEEET---TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCccEEEeCCCcEEEEEEEEecC--CCEEEEEECCEECcC---CCCEEEEEeC---CEEEEEECCCCcccCEEEEEEEEe
Confidence 34567889999999999999984 459999999988743 2344443333 235799999999999999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..|
T Consensus 84 ~~g 86 (99)
T 3puc_A 84 SAG 86 (99)
T ss_dssp TTE
T ss_pred CCC
Confidence 998
No 245
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.42 E-value=1.2e-11 Score=101.97 Aligned_cols=128 Identities=10% Similarity=0.125 Sum_probs=75.5
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEE-EEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTIN-LTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~ 168 (236)
..|.|..+..+|.|.|+|.+.+.........+.... ..... . ++...+..+.. .|+.+. |.|.+.+.+.
T Consensus 361 s~L~i~~~~~~d~g~y~C~a~n~~~~~~~~~~~~~~----~~~~~-~-~p~v~~~~~~~----~~~~~~~L~C~~~g~~P 430 (512)
T 1zvo_C 361 SRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREP----AAQAP-V-KLSLNLLASSD----PPEAASWLLCEVSGFSP 430 (512)
T ss_pred EEEEEchHHhcCCCeEEEEEEeCCCCCCceeEEeec----CCCCC-C-CCEEEEEccCc----CCCCceEEEEEEeeeCC
Confidence 358899999999999999999865432111221110 00000 0 11111111111 688899 9999998642
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecC--cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKG--ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+...+.|+++|..+..............++ ....+.|.+.....+|.|.|+|.|.|...
T Consensus 431 ~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l 491 (512)
T 1zvo_C 431 PNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDS 491 (512)
T ss_pred CCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCC
Confidence 335789999998875421110011112222 23345677777777789999999999864
No 246
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.42 E-value=1.6e-12 Score=83.01 Aligned_cols=76 Identities=17% Similarity=0.392 Sum_probs=59.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.| .+.+.|++++..+... ...++...... ...+|.|.++..+|.|.|+|.|.|.
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~~~~~~~-~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~n~ 85 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEP--TPEVTWSCGGRKIHSQ-EQGRFHIENTD---DLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEES--CCEEEEEETTEECCTT-GGGTEEEEECS---SEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEcCCCcEEEEEEEEEcC--CCceEEEECCEEeecC-CCCEEEEEecC---CEEEEEEeecCcccCEEEEEEEEeC
Confidence 4567889999999999999985 4599999999877431 12344433332 2358999999999999999999999
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.|
T Consensus 86 ~g 87 (100)
T 3irg_A 86 FG 87 (100)
T ss_dssp TE
T ss_pred CC
Confidence 98
No 247
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.6e-12 Score=84.71 Aligned_cols=79 Identities=22% Similarity=0.305 Sum_probs=60.2
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+.| .+.+.|++++..+... ..+........ ....|.|.++..+|.|.|+|.|.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~k~g~~~~~~--~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 13 MKLKHYKIFEGMPVTFTCRVAGNP--KPKIYWFKDGKQISPK--SDHYTIQRDLD--GTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp SCCCCEEEETTCCEEEEEEBCCSS--CCEEEEECSSCBCCTT--CSSEEEEECTT--CEEEEEESSCCTTTCSCCEEEEE
T ss_pred ecCcCeEEeCCCeEEEEEEEEecC--CCEEEEEECCEECCCC--CCeEEEEECCC--cEEEEEECCCChhhCEEEEEEEE
Confidence 335577889999999999999884 4599999998877432 12333333211 33579999999999999999999
Q ss_pred CCCCc
Q psy10361 224 NSQAK 228 (236)
Q Consensus 224 n~~g~ 228 (236)
|..|.
T Consensus 87 N~~g~ 91 (110)
T 2dm2_A 87 NPQGR 91 (110)
T ss_dssp CTTCC
T ss_pred ECCCe
Confidence 99983
No 248
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.42 E-value=3.7e-13 Score=101.23 Aligned_cols=137 Identities=20% Similarity=0.322 Sum_probs=73.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC--------------ceeEEEEEEEEEEeeCCcccccCCCcc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH--------------QAHYIYLTVVVLVINDGKYLLVPEPET 141 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~--------------~~~~~~l~v~~~~~~~~~~~~~~~~~~ 141 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+..+ ......|.|. ..+...|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~----------~~~~~~P 134 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVS----------SASTKGP 134 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEEC----------SSCCBCC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEec----------CCCCcCC
Confidence 467776544334567999999999999999999987643 1123466665 1111122
Q ss_pred ccc-CCCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEE
Q psy10361 142 DII-GGPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 142 ~~~-~~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y 218 (236)
.+. ..+...+..|+.+.|.|.+.+. |. +..+.|++++..+...... . ....++ ....+.|.|..+...| |.|
T Consensus 135 ~v~~~~p~~~~~~g~~v~L~C~~~g~~P~-pi~v~W~k~g~~~~~~~~~-~--~~~~~g~y~~~s~L~I~~~~~~~-g~Y 209 (257)
T 3bn9_D 135 SVFPLAPSSKSTSGGTAALGCLVKDYFPE-PVTVSWNSGALTSGVHTFP-A--VLQSSGLYSLSSVVTVPSSSLGT-QTY 209 (257)
T ss_dssp EECCCCC-----------CCCEEEEEBSS-CCEEEETTTTCCSSCEECC-C--EECTTSCEEEEEECCCC--------CE
T ss_pred cEEEecCcccccCCCcEEEEEEEeeEECC-CcEEEEeeCCCcCCcEecC-C--eEcCCCCEEEEEEEEEcccccCC-CeE
Confidence 222 1222235679999999999875 43 2489999998653211100 0 111222 2344578888887777 999
Q ss_pred EEEeCCCCC
Q psy10361 219 QCNPANSQA 227 (236)
Q Consensus 219 ~C~a~n~~g 227 (236)
+|.|.|...
T Consensus 210 tC~v~n~~~ 218 (257)
T 3bn9_D 210 ICNVNHKPS 218 (257)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEecCC
Confidence 999999764
No 249
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=80.03 Aligned_cols=78 Identities=22% Similarity=0.384 Sum_probs=58.8
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.+|+++.|.|.+.+ |. +.+.|++++..+.. ..++...... ...+|.|.++..+|+|.|+|.|.|..
T Consensus 5 ~v~~~~G~~v~l~C~vs~-p~--p~v~W~k~g~~l~~---~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~- 74 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLSG-PG--GPVRWYKDGERLAS---QGRVQLEQAG---ARQVLRVQGARSGDAGEYLCDAPQDS- 74 (84)
T ss_dssp CEEECTTSCEEEECCCSC-CS--TTCEEEETTEECCC---CSSEEEEECS---SCEEEEESSCSSTTCEEEEEECTTTC-
T ss_pred EEEEecCCCEEEEEEECC-CC--cEEEEEECCEEccc---cccEEEeecC---CeEEEEecCCCCcccEEEEEEECCEE-
Confidence 567889999999999865 43 47999999998854 2344444333 23579999999999999999998865
Q ss_pred ceEEEEEc
Q psy10361 228 KSVMVNVL 235 (236)
Q Consensus 228 ~~~~~~v~ 235 (236)
.++.|.|.
T Consensus 75 ~~a~l~V~ 82 (84)
T 2lu7_A 75 RIFLVSVE 82 (84)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 44556553
No 250
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.42 E-value=1.5e-12 Score=81.79 Aligned_cols=73 Identities=23% Similarity=0.338 Sum_probs=57.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.| .+.+.|++++..+.... . ..|.|.++..+|+|.|+|.|.|.
T Consensus 10 p~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~~~~~~~~~----------~-----~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 10 PTSQKLMPGSTLVLQCVAVGSP--IPHYQWFKNELPLTHET----------K-----KLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CCCEEECTTSCEEEECEEECSS--CCEEEEEETTEECTTCC----------S-----SEEEESSCCGGGCEEEEEEEECS
T ss_pred CCccEecCCCcEEEEEEeccCC--CCEEEEEcCCeeCCcCC----------C-----CeEEECCCCHHhCEEEEEEEEcC
Confidence 4456788999999999999985 45999999988764211 1 27999999999999999999999
Q ss_pred CCc----eEEEEEc
Q psy10361 226 QAK----SVMVNVL 235 (236)
Q Consensus 226 ~g~----~~~~~v~ 235 (236)
.|. .+.|.|.
T Consensus 73 ~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 73 RDSQDSKKVEIIID 86 (91)
T ss_dssp SCEEECCCEEEEEC
T ss_pred CCCEEeeeEEEEEe
Confidence 982 3455554
No 251
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.41 E-value=8e-13 Score=97.75 Aligned_cols=144 Identities=17% Similarity=0.230 Sum_probs=86.9
Q ss_pred cCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecC---CC--ceeEEEEEEEEEEeeCCccc-ccCCCcccccCCCc
Q psy10361 75 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTT---PH--QAHYIYLTVVVLVINDGKYL-LVPEPETDIIGGPE 148 (236)
Q Consensus 75 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~---~~--~~~~~~l~v~~~~~~~~~~~-~~~~~~~~~~~~~~ 148 (236)
.++|+.+..........|.|.+++.+|+|.|.|.+.+. .. ......|.|... .+.. ...++.+.+..+..
T Consensus 64 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~----~~~l~~~~~p~~~v~~p~~ 139 (230)
T 1ypz_F 64 EYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPS----DKRLDADISPKPTIFLPSV 139 (230)
T ss_dssp SSSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECC----CTTCCSCCSCCCCEECCCH
T ss_pred cCCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecc----cccCcccCCCCceEECCCc
Confidence 35677766543335679999999999999999999874 21 123456666500 0000 00012222222222
Q ss_pred EEEecCCeEEEEeEEeeC-CCCCCeEEEee-cCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 149 VFIENGSTINLTCVVRFS-PEPPAYIFWNH-NEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
..+..|+.+.|.|.+.+. |. ++.+.|++ ++..+..... .... ..+......+.|.|..... + |.|+|.+.|..
T Consensus 140 ~~v~~g~~~~L~C~~~g~~P~-~~~v~W~~~~g~~l~~~~~-~~~~-~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~ 214 (230)
T 1ypz_F 140 AETNLHKTGTYLCLLEAFFPD-VIRVYWKEKDGNTILDSQE-GDTL-KTNDTYMKFSWLTVPERAM-G-KEHRCIVKHEN 214 (230)
T ss_dssp HHHHHHSCEEEEEEEEEESSC-CCEEEEECTTSSCBCCCEE-CCCE-EETTEEEEEEEEEECGGGT-T-SCEEEEEECSS
T ss_pred hhhccCCcceEEEEEeeecCC-CeEEEEEccCCeEcccccc-ceee-cCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECC
Confidence 234468899999999876 43 35999999 7765532111 1111 1222223446788888775 4 99999999987
Q ss_pred C
Q psy10361 227 A 227 (236)
Q Consensus 227 g 227 (236)
+
T Consensus 215 ~ 215 (230)
T 1ypz_F 215 N 215 (230)
T ss_dssp C
T ss_pred C
Confidence 5
No 252
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.41 E-value=7.2e-13 Score=97.71 Aligned_cols=139 Identities=16% Similarity=0.149 Sum_probs=81.5
Q ss_pred CcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC----------CceeEEEEEEEEEEeeCCcccccCCCccccc-C
Q psy10361 77 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP----------HQAHYIYLTVVVLVINDGKYLLVPEPETDII-G 145 (236)
Q Consensus 77 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~----------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~ 145 (236)
+|+.+..........|.|.+++.+|+|.|.|.+.+.. .......|.|. ..+...|.+. .
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~----------~~~~~~P~i~~~ 135 (226)
T 3mlr_H 66 GQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVS----------SGTTKGPSVFPL 135 (226)
T ss_dssp TTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEEC----------CCCCBCCEEEEE
T ss_pred CcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeec----------cCCCCCCcEEEe
Confidence 5666654433456789999999999999999987642 01123345554 1111122222 1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
++...+..|+.+.|.|.+.+.+.+...+.| ++..+.............+......+.|.|.....+| |.|+|.+.|.
T Consensus 136 ~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~ 212 (226)
T 3mlr_H 136 APSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 212 (226)
T ss_dssp EEEECSTTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEG
T ss_pred cCcccccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEEC
Confidence 122223578999999999885322458999 3322210000000111111223344689999998888 9999999998
Q ss_pred CCc
Q psy10361 226 QAK 228 (236)
Q Consensus 226 ~g~ 228 (236)
.+.
T Consensus 213 ~~~ 215 (226)
T 3mlr_H 213 PSN 215 (226)
T ss_dssp GGT
T ss_pred CCC
Confidence 864
No 253
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.40 E-value=4.4e-13 Score=99.63 Aligned_cols=144 Identities=13% Similarity=0.153 Sum_probs=82.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC------ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH------QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEV 149 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (236)
.+|+.+... ......|.|.+++.+|+|.|.|.+.+..+ ......|.|.. ...... ++...+..+...
T Consensus 59 ~~R~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~~-~P~v~~~~~~~~ 131 (238)
T 1bec_A 59 PDGYKASRP-SQEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLE-----DLRQVT-PPKVSLFEPSKA 131 (238)
T ss_dssp CTTCEEECC-SSSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEES-----CGGGCB-CCEEEEECCCST
T ss_pred cceEEEEec-CCCEEEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEec-----cCCCCC-CCceEEECCChH
Confidence 456665532 13567899999999999999999987631 12334677761 000000 111111222222
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCc-ceEEEEEEcccCCCC-CeEEEEEeCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGE-TTVSYLLIQKARPSD-NGKYQCNPANSQ 226 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d-~G~y~C~a~n~~ 226 (236)
.+..|+.+.|.|.+.+.+.++..+.|++++..+..............++. ...+.|.|......| .|.|+|.|.|..
T Consensus 132 ~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 132 EIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp TCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred HcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 34568999999999885212348999999988743110000111122321 223445555554444 678999999974
No 254
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.40 E-value=2.4e-12 Score=83.32 Aligned_cols=83 Identities=25% Similarity=0.434 Sum_probs=62.2
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+.| .+.+.|++++..+.. ..+..+.... ....|.|.++..+|.|.|+|.|.|
T Consensus 19 ~~~~~~v~~G~~v~l~C~~~g~p--~p~i~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 19 FPRPVRVVSGAEAELKCVVLGEP--PPVVVWEKGGQQLAA---SERLSFPADG---AEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCC---CSSEECCEET---TEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCccEEEeCCCeEEEEEEEeecC--CCEEEEEECCeECCC---CCcEEEEeCC---CEEEEEEccCCHHhCEEEEEEEEc
Confidence 34567889999999999999985 459999999987743 1233322222 335799999999999999999999
Q ss_pred CCC---ceEEEEEc
Q psy10361 225 SQA---KSVMVNVL 235 (236)
Q Consensus 225 ~~g---~~~~~~v~ 235 (236)
..| ..+.|.|.
T Consensus 91 ~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 91 AAGEAYAAAAVTVL 104 (107)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 998 34455553
No 255
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.39 E-value=1.2e-12 Score=106.48 Aligned_cols=138 Identities=17% Similarity=0.271 Sum_probs=87.6
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-------------ceeEEEEEEEEEEeeCCcccccCCCccc
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-------------QAHYIYLTVVVLVINDGKYLLVPEPETD 142 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-------------~~~~~~l~v~~~~~~~~~~~~~~~~~~~ 142 (236)
.+|+.+..........|.|.+++.+|+|.|+|.+.+..+ ......|.|. ..+...+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~P~ 134 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVS----------SASTKGPS 134 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEEC----------SCCCBCCE
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEec----------CCCCCCCe
Confidence 457776543333567899999999999999999988643 2234566665 11111112
Q ss_pred c-cCCCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEE
Q psy10361 143 I-IGGPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQ 219 (236)
Q Consensus 143 ~-~~~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~ 219 (236)
+ ..++...+.+|+.+.|.|.+.+. |. ++.+.|++++..+.... .......++ ....+.|.|.++..+| |.|+
T Consensus 135 i~~~~~~~~~~~g~~v~L~C~~~g~~P~-~~~v~W~k~~~~~~~~~---~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~ 209 (457)
T 1hzh_H 135 VFPLAPSSKSTSGGTAALGCLVKDYFPE-PVTVSWNSGALTSGVHT---FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 209 (457)
T ss_dssp EEEECCCSCCCTTCCEEEEEEEESBBSC-CCEEEETTTTBCTTEEE---EEEEECTTSCEEEEEEEEECSGGGGT-SCCE
T ss_pred EEecCccccccCCCcEEEEEEEeEEeCC-CeEEEEEeCCEeccceE---cCceECCCCCEEEEEEEEecccccCC-ceEE
Confidence 1 11222235689999999999876 32 25899999985431100 000111111 2234579999999999 9999
Q ss_pred EEeCCCCCc
Q psy10361 220 CNPANSQAK 228 (236)
Q Consensus 220 C~a~n~~g~ 228 (236)
|.|.|..+.
T Consensus 210 C~a~n~~~~ 218 (457)
T 1hzh_H 210 CNVNHKPSN 218 (457)
T ss_dssp EEEEEGGGT
T ss_pred EEEEeCCCC
Confidence 999998763
No 256
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.38 E-value=2.4e-12 Score=85.47 Aligned_cols=89 Identities=19% Similarity=0.233 Sum_probs=60.2
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee--cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD--SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
..+.+.+|+++.|.|.+.+.|.|.+.+.|++++..+... .................++|.|.++..+|+|.|+|.|.|
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 95 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 95 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEcc
Confidence 345788999999999999976566799999987643210 011111111111011345799999999999999999999
Q ss_pred CCC---ceEEEEEc
Q psy10361 225 SQA---KSVMVNVL 235 (236)
Q Consensus 225 ~~g---~~~~~~v~ 235 (236)
..| .++.|.|+
T Consensus 96 ~~g~~~~~~~l~V~ 109 (122)
T 3s35_X 96 GLMTKKNSTFVRVH 109 (122)
T ss_dssp SSCEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEe
Confidence 998 34455553
No 257
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.38 E-value=9.1e-13 Score=98.79 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=79.5
Q ss_pred cEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-------ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEE
Q psy10361 78 RFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-------QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVF 150 (236)
Q Consensus 78 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (236)
|+.+..... .. |.|.+++.+|+|.|.|.+.+... ......|.|.. ...... ++...+..+....
T Consensus 65 R~~~~~~~~--~~-L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~-----~~~~~~-~P~v~~~~~~~~~ 135 (253)
T 3to4_D 65 DYLATRVTD--TE-LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLE-----DLKNVF-PPEVAVFEPSEAE 135 (253)
T ss_dssp EEEEECCSS--SC-CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEES-----CSTTCB-CCEEEEEECCHHH
T ss_pred cEEEEeCCC--Ce-EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEec-----CCCCCC-CCeEEEeCCChhh
Confidence 666554322 22 99999999999999999976432 12334566650 000000 0111111111112
Q ss_pred EecCCeEEEEeEEeeCCCCCC-eEEEeecCeEEeeecCCCceEEE-----eecCcceEEEEEEcccCCCC-CeEEEEEeC
Q psy10361 151 IENGSTINLTCVVRFSPEPPA-YIFWNHNEAIISYDSQRGGVNVI-----TEKGETTVSYLLIQKARPSD-NGKYQCNPA 223 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~p~p~~-~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~d-~G~y~C~a~ 223 (236)
+..|+.+.|.|.+.+.+ |.+ .+.|++++..+............ .+......+.|.|.....+| .|.|+|.|.
T Consensus 136 ~~~g~~~~L~C~~~g~~-P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~ 214 (253)
T 3to4_D 136 ISHTQKATLVCLATGFY-PDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 214 (253)
T ss_dssp HHHHSEEEEEEEEEEEB-SSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEE
T ss_pred cccCCceEEEEEEceEE-CCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEE
Confidence 22468999999999843 333 89999999887431100000000 11112334578888877777 779999998
Q ss_pred CCC
Q psy10361 224 NSQ 226 (236)
Q Consensus 224 n~~ 226 (236)
|..
T Consensus 215 h~~ 217 (253)
T 3to4_D 215 FYG 217 (253)
T ss_dssp ECC
T ss_pred eCC
Confidence 874
No 258
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.38 E-value=3.5e-13 Score=98.84 Aligned_cols=127 Identities=17% Similarity=0.221 Sum_probs=74.5
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee-C
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF-S 166 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~ 166 (236)
...|.|.+++.+|+|.|+|.+.+..... ....+... ..... ++...+....... ..|+.+.|.|.+.| .
T Consensus 75 ~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~-------~~~~~-~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~ 145 (218)
T 2rgs_A 75 VSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKI-------KGLVR-APQVYILPPPAEQ-LSRKDVSLTCLVVGFN 145 (218)
T ss_dssp EEEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCC-------CCCCB-CCEEEEECCCGGG-TTSSEEEEEEEEEEEB
T ss_pred EEEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeec-------CCCCC-CCEEEEECCChHH-hcCCceEEEEEEEeee
Confidence 3579999999999999999999875432 11111110 00001 1111111111111 24899999999998 4
Q ss_pred CCCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 PEPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
| ++..+.|++++..+..... .... ...++ ....+.|.+.....+|.|.|+|.|.|...
T Consensus 146 P-~~~~v~W~k~g~~~~~~~~-~~~~-~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 146 P-GDISVEWTSNGHTEENYKD-TAPV-LDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp S-SCCEEEEEETTEEECCEEE-CCCE-ECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred C-CCcEEEEEECCEeccCcee-cccE-ECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 3 2348999999987642110 1111 12222 22334566666666679999999999874
No 259
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.37 E-value=3e-12 Score=81.12 Aligned_cols=70 Identities=16% Similarity=0.355 Sum_probs=56.4
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+..|+++.|.|.+.+. | +.+.|++++..+.. ..++.. ... .|.|.++..+|+|.|.|.|.|
T Consensus 15 ~~~~~~v~~G~~v~l~C~~~g~--p-p~i~W~k~g~~~~~---~~~~~~--~~~-----~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 15 EVESLLVHPGDLLQLRCRLRDD--V-QSINWLRDGVQLVE---SNRTRI--TGE-----EVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp BBCCEEECTTSCEEEECCEESS--C-CEEEEEBTTBCCCC---CSSEEE--CSS-----EEEESSCCGGGSEEEEEEEEE
T ss_pred CcceEEEcCCCeEEEEEECCCC--C-CceEEEECCEecCC---CCCEEE--eCC-----EEEECCCChHHCEEEEEEecc
Confidence 3557788999999999999987 4 39999999887743 223332 222 799999999999999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..|
T Consensus 82 ~~g 84 (95)
T 2ckn_A 82 PSG 84 (95)
T ss_dssp TTE
T ss_pred CCC
Confidence 998
No 260
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.2e-12 Score=83.56 Aligned_cols=73 Identities=30% Similarity=0.426 Sum_probs=57.0
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+.| .+.+.|++++..+... ..... . ....|.|.++..+|.|.|+|.|.|
T Consensus 17 ~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~g~~~~~~----~~~~~--~---~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 17 VLKDCAVIEGQDFVLQCSVRGTP--VPRITWLLNGQPIQYA----RSTCE--A---GVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp CCCCEEECTTCCEEEECEEEEES--CCCCEEEESSSBCSSC----CCEEE--T---TEEEEEECSCCTTCCBCEEEEEEC
T ss_pred cCCCCEEeCCCeEEEEEEEeeeC--CCeEEEEECCEECccc----ceEee--C---CeEEEEECCCChhhCEEEEEEEEE
Confidence 35567889999999999999985 4589999998776421 11111 1 235799999999999999999999
Q ss_pred CCCc
Q psy10361 225 SQAK 228 (236)
Q Consensus 225 ~~g~ 228 (236)
..|.
T Consensus 86 ~~g~ 89 (99)
T 2yr3_A 86 ALGQ 89 (99)
T ss_dssp SSCE
T ss_pred CCCe
Confidence 9983
No 261
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=2.3e-12 Score=85.07 Aligned_cols=74 Identities=26% Similarity=0.495 Sum_probs=58.6
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+..|+++.|.|.+.+.| .+.+.|++++..+... ..+.... .++ +|.|.++..+|+|.|+|.|.
T Consensus 13 ~~p~~~~v~~G~~v~l~C~~~g~p--~p~i~W~k~g~~~~~~--~~~~~~~-~~~-----~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 13 QGPVNQTVAVDGTFVLSCVATGSP--VPTILWRKDGVLVSTQ--DSRIKQL-ENG-----VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp BCCCCEEEETTCEEEEECBCCCSS--CCEEEEEESSSBCCTT--STTEEEE-ETT-----EEEEESCCGGGCCCEEEEEE
T ss_pred cCCCCEEEcCCCeEEEEEEEEecC--CCEEEEEECCEECcCC--CCeEEEc-cCC-----EEEEccCCcCCCEEEEEEEE
Confidence 345577899999999999999884 4599999998877431 2233333 333 79999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 83 n~~g 86 (118)
T 2eo9_A 83 TPSG 86 (118)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 9998
No 262
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.36 E-value=3.4e-12 Score=84.50 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=52.7
Q ss_pred cCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEee--cCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 153 NGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITE--KGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 153 ~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+..+.|.|.+.|.|. +.+.|+++|..+... .+........ .......+|.|.++...|+|.|+|.|.|.+|
T Consensus 14 ~~~~~~l~c~v~G~P~--P~I~W~knG~~l~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G 87 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPA--PSLRWLFNGSVLNET-SFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFG 87 (126)
T ss_dssp CCCEEEEEEEECCSSC--CEEEEEETTEECCCC-SSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTE
T ss_pred cCccEEEEEEEeeeCC--CeEEEEECCEECCCC-CceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCC
Confidence 4678899999999955 599999999988542 1111111110 1111345799999999999999999999999
No 263
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=7.8e-12 Score=82.83 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=58.5
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCC-CCCCeEEEeecCeEEeeecCCCceEEEe---ecCcceEEEEEEcccCCCCCeE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSP-EPPAYIFWNHNEAIISYDSQRGGVNVIT---EKGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p-~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~i~~v~~~d~G~ 217 (236)
++..+....+.+|+++.|.|.+.+.+ .|.+.|.|+++...........++.+.. .........|.|.++..+|+|.
T Consensus 10 F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~ 89 (126)
T 2dav_A 10 FIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGN 89 (126)
T ss_dssp CCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEE
T ss_pred EEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEE
Confidence 44556778899999999999998752 2456999999742110000112222221 1111234689999999999999
Q ss_pred EEEEeCCCCC
Q psy10361 218 YQCNPANSQA 227 (236)
Q Consensus 218 y~C~a~n~~g 227 (236)
|+|.|.|..|
T Consensus 90 Y~Cevsn~~g 99 (126)
T 2dav_A 90 YRCEVTYKDK 99 (126)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEeCCC
Confidence 9999999987
No 264
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.35 E-value=3.8e-12 Score=95.33 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=56.5
Q ss_pred CCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCC---CCeE
Q psy10361 97 PQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEP---PAYI 173 (236)
Q Consensus 97 ~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p---~~~v 173 (236)
++.+|+|.|+|.|.... . ....+.+. .+......+....+.+|+++.|.|.+.+.|.+ .+.+
T Consensus 11 v~~~dsg~Y~C~a~g~~-~-~~~~~~~~-------------~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v 75 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYS-F-TNYWMNWL-------------RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYL 75 (254)
T ss_dssp ------------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCE
T ss_pred ecCCccEEEEEcCchhh-h-hhhhhhee-------------eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCce
Confidence 78899999999998221 1 22222222 12222333567889999999999999887410 2689
Q ss_pred EEeecC--eEEe---------eecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 174 FWNHNE--AIIS---------YDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 174 ~W~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|++++ ..+. ......++...... ...+|.|.+++.+|+|.|.|.|.|..+
T Consensus 76 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 137 (254)
T 2c1o_A 76 NWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSG---TDFTLKISRVEAEDLGIYYCVQGSHFP 137 (254)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred EEEEeCCCCCceEEEEeccccCCCccceEEEecCC---CEEEEEECcCCcccCEEEEEEEEcCcc
Confidence 999743 2111 00111334333222 335899999999999999999999854
No 265
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.35 E-value=1e-11 Score=92.97 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=83.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC----CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEE
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP----HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFI 151 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (236)
.+|+.+.... .....|.|.+++.+|+|.|.|.+.+.. .......|.|.. .. ....++...+..+....+
T Consensus 63 ~~R~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~-----~~-~~~~~P~v~~~~~~~~~~ 135 (252)
T 1oga_E 63 AEGYSVSREK-KESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTE-----DL-KNVFPPEVAVFEPSEAEI 135 (252)
T ss_dssp CTTEEECCSS-TTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEES-----CG-GGCBCCEEEEECCCHHHH
T ss_pred CCcEEEEecC-CCEEEEEECcCChhhCEEEEEEEecCCccceeECCCEEEEEec-----cc-CCCCCCeEEEECCChhhh
Confidence 3566654321 345689999999999999999998751 112334566650 00 000001111111222223
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEE----eecC-cceEEEEEEcccCCC-CCeEEEEEeCCC
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVI----TEKG-ETTVSYLLIQKARPS-DNGKYQCNPANS 225 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~L~i~~v~~~-d~G~y~C~a~n~ 225 (236)
..|+.+.|.|.+.+.+.+++.+.|++++..+............ ..++ ....+.|.|...... +.|.|+|.+.|.
T Consensus 136 ~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~ 215 (252)
T 1oga_E 136 SHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFY 215 (252)
T ss_dssp HHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred ccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcC
Confidence 3689999999998852123589999999877431100000000 0121 234456888776654 577999999998
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
..
T Consensus 216 ~l 217 (252)
T 1oga_E 216 GL 217 (252)
T ss_dssp CB
T ss_pred CC
Confidence 63
No 266
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.35 E-value=8.5e-13 Score=99.60 Aligned_cols=139 Identities=16% Similarity=0.215 Sum_probs=79.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC---------ceeEEEEEEEEEEeeCCcccccCCCccccc-C
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH---------QAHYIYLTVVVLVINDGKYLLVPEPETDII-G 145 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~---------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~ 145 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+... ......|.|. ..+...+.+. .
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~----------~~~~~~P~v~~~ 133 (263)
T 3iu4_H 64 KSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVS----------AASTKGPSVFPL 133 (263)
T ss_dssp TTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEEC----------SSCCBCCEEEEE
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEe----------cccCCCCEEEEc
Confidence 467776544444567899999999999999999987531 1133455554 1111122222 1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
.+...+..|+.+.|.|.+.+.+.+.+.+.| ++..+.............+......+.|.|.....+| |.|+|.+.|.
T Consensus 134 ~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~ 210 (263)
T 3iu4_H 134 APSSKGSTSGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 210 (263)
T ss_dssp CCCCCC----EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEG
T ss_pred cCccccccCCcEEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEEC
Confidence 222223478999999999886412368999 3332211000000111111222344578888888888 9999999998
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.+
T Consensus 211 ~~ 212 (263)
T 3iu4_H 211 PS 212 (263)
T ss_dssp GG
T ss_pred CC
Confidence 75
No 267
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.7e-12 Score=84.60 Aligned_cols=84 Identities=19% Similarity=0.350 Sum_probs=61.5
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+.| .+.+.|++++..+... .......... ...+|.|.++..+|.|.|+|.|.
T Consensus 14 ~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~~~g~~~~~~---~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 14 QAPGDLTVQEGKLCRMDCKVSGLP--TPDLSWQLDGKPVRPD---SAHKMLVREN--GVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp ECCCEEEEESSSCBCCEEEEECSS--CCEEECBBSSSBCCCC---SSEEEEECTT--SCEEEEESSCCGGGCSBBCEEEE
T ss_pred eCCCcEEEeCCCEEEEEEEEEEcC--CCEEEEEECCEECCCC---CceEEEEecC--CeEEEEEeeCCcccCEEEEEEEE
Confidence 345677889999999999999984 4599999998876432 1122111111 23579999999999999999999
Q ss_pred CCCC---ceEEEEE
Q psy10361 224 NSQA---KSVMVNV 234 (236)
Q Consensus 224 n~~g---~~~~~~v 234 (236)
|..| ..+.|.|
T Consensus 87 n~~g~~~~~~~l~V 100 (110)
T 2dm3_A 87 NRAGQNSFSLELVV 100 (110)
T ss_dssp CSSCEEEECCEEEE
T ss_pred CCCCEEEEEEEEEE
Confidence 9998 3334544
No 268
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=1.2e-11 Score=79.61 Aligned_cols=76 Identities=17% Similarity=0.284 Sum_probs=57.9
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+.+.+|+++.|.|.+.+.| .+ +.|++++..+... .++.+.... ....|.|.++..+|+|.|+|.|.|..+
T Consensus 20 ~~v~~G~~v~l~C~~~~~p--~~-v~W~k~g~~~~~~---~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~~- 89 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVD--FP-ATWYKDGQKVEES---ELLVVKMDG---RKHRLILPEAKVQDSGEFECRTEGVSA- 89 (104)
T ss_dssp EEEESSSCEECCEECSSTT--CC-CEEEETTEECCCB---TTBEEEEET---TEEEEEESSCCTTTCEEEEEECSSCCC-
T ss_pred EEEeCCCcEEEEEEecCCC--Cc-cEEeeCCEECCCC---CCEEEEeCC---CEEEEEECCCChhhCEEEEEEECCceE-
Confidence 6889999999999998884 44 8999999887542 233333222 235799999999999999999999865
Q ss_pred eEEEEE
Q psy10361 229 SVMVNV 234 (236)
Q Consensus 229 ~~~~~v 234 (236)
.+.|.|
T Consensus 90 ~~~l~V 95 (104)
T 2e6p_A 90 FFGVTV 95 (104)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 444444
No 269
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.34 E-value=1.2e-11 Score=85.61 Aligned_cols=75 Identities=19% Similarity=0.317 Sum_probs=58.6
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+..|+++.|.|.+.+.| .+.+.|++++..+.. ..+..+..... ....|.|.++...|.|.|+|.|.|.
T Consensus 48 ~~~~~v~~G~~v~L~C~~~g~P--~p~v~W~k~g~~~~~---~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~N~ 120 (154)
T 1fhg_A 48 ILDMEVVEGSAARFDCKVEGYP--DPEVMWFKDDNPVKE---SRHFQIDYDEE--GNCSLTISEVCGDDDAKYTCKAVNS 120 (154)
T ss_dssp CCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCC---SSSEEEEECTT--CEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcEEEeCCCeEEEEEEEEEec--CCEEEEEECCEECCC---CCcEEEEECCC--CeEEEEECCCChhcCEEEEEEEEEC
Confidence 4567889999999999999985 459999999987743 22333322211 2358999999999999999999999
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.|
T Consensus 121 ~G 122 (154)
T 1fhg_A 121 LG 122 (154)
T ss_dssp TE
T ss_pred CC
Confidence 98
No 270
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.33 E-value=5.1e-12 Score=79.29 Aligned_cols=74 Identities=22% Similarity=0.325 Sum_probs=54.4
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCce
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKS 229 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~ 229 (236)
.+.+|+++.|.|.+.+ | .+.+.|+++|..+... .++.+..++ ...+|.|.++..+|+|.|+|.|.|..+ +
T Consensus 17 ~~~~g~~v~l~C~v~~-p--~~~v~W~k~g~~i~~~---~~~~i~~~~---~~~~L~I~~v~~~D~G~Y~C~a~n~~~-~ 86 (91)
T 2lvc_A 17 HAITSECVMLACEVDR-E--DAPVRWYKDGQEVEES---DFVVLENEG---PHRRLVLPATQPSDGGEFQCVAGDECA-Y 86 (91)
T ss_dssp ECCTTCCEEEEEECSC-T--TSCCEEEETTSCCCCC---SSCEEEEET---TEEEEEESSCCGGGCSEEEEECSSCEE-E
T ss_pred EEECCCcEEEEEEECC-C--CcEEEEEECCEEeeee---eeeeEEecC---CeEEEEeCCCChhhcEEEEEEEcceEE-E
Confidence 4458999999999855 3 3489999999988542 334444333 235799999999999999999988653 3
Q ss_pred EEEE
Q psy10361 230 VMVN 233 (236)
Q Consensus 230 ~~~~ 233 (236)
+.|.
T Consensus 87 ~~lt 90 (91)
T 2lvc_A 87 FTVT 90 (91)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 271
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.33 E-value=1.3e-11 Score=89.71 Aligned_cols=105 Identities=16% Similarity=0.218 Sum_probs=67.7
Q ss_pred EecCCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEe--------------------------------cce---
Q psy10361 18 TYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVR--------------------------------HRD--- 62 (236)
Q Consensus 18 ~~~~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~--------------------------------~~~--- 62 (236)
....+.|+.+......+..+|.|.+++.+|+|.|.|.+.+-. .+.
T Consensus 43 ~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 122 (207)
T 3rbs_A 43 EIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 122 (207)
T ss_dssp EECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred ECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEEEEEccchhhhcccccccccccccCCCCceEe
Confidence 344566776665434466789999999999999999665410 010
Q ss_pred -----------eEE------e-cceeeEEecCCcEEEEcC---CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEE
Q psy10361 63 -----------IHL------L-TTGRYTYTNDQRFRVINN---PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIY 120 (236)
Q Consensus 63 -----------~~~------~-~~~~~~~~~~~~~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~ 120 (236)
..+ . +...+.|.+++....... ...+...|.|.+++.+|+|.|+|.|.|..+.. ..+.
T Consensus 123 ~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 202 (207)
T 3rbs_A 123 YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 202 (207)
T ss_dssp EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEE
Confidence 000 0 234567777665432111 11233579999999999999999999988755 4444
Q ss_pred EE
Q psy10361 121 LT 122 (236)
Q Consensus 121 l~ 122 (236)
|.
T Consensus 203 L~ 204 (207)
T 3rbs_A 203 LV 204 (207)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 272
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=6.1e-12 Score=82.40 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=59.6
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCC-CCCCeEEEeecCeEEeeecCCCceEEEee---cCcceEEEEEEcccCCCCCeE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSP-EPPAYIFWNHNEAIISYDSQRGGVNVITE---KGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~i~~v~~~d~G~ 217 (236)
++..+..+.+.+|+++.|.|.+.+.+ .|.+.|.|+++...........++.+... ........|.|.++...|+|.
T Consensus 15 f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 94 (118)
T 2edn_A 15 FLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGY 94 (118)
T ss_dssp CSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSC
T ss_pred EEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEE
Confidence 44556788999999999999998753 24569999997522111011122332211 111234689999999999999
Q ss_pred EEEEeCCCCC
Q psy10361 218 YQCNPANSQA 227 (236)
Q Consensus 218 y~C~a~n~~g 227 (236)
|+|.+.|..|
T Consensus 95 Y~Cevsn~~g 104 (118)
T 2edn_A 95 YRLEVKAKDT 104 (118)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEEcCC
Confidence 9999999998
No 273
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.33 E-value=4e-11 Score=87.14 Aligned_cols=165 Identities=18% Similarity=0.182 Sum_probs=91.5
Q ss_pred CCceEEEEcCCCCCCCeeEEEEEEEEecce---eEEecceeeEEecCCcEEEEcC-CCCCcEEEEEcCCCCCCCEEEEEE
Q psy10361 33 SDDWTLQLKYPQHKDTGIYECQVSFVRHRD---IHLLTTGRYTYTNDQRFRVINN-PTSDDWTLQLKYPQHKDTGIYECQ 108 (236)
Q Consensus 33 ~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~ 108 (236)
+.+++|.+..-... . .+.|.+... ...+.........++|+.+... .......|.|.+++.+|+|.|.|.
T Consensus 16 G~~v~L~C~~~~~~---~---~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (207)
T 1ypz_E 16 GTDSALRCNFTTTM---R---SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCA 89 (207)
T ss_dssp TCCEEEEEEESSCC---S---EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEEEEEEEeCCC---e---EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEE
Confidence 35677777643221 1 488876431 1111111111123467776654 334567999999999999999999
Q ss_pred eecCCC------------ceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEe
Q psy10361 109 VSTTPH------------QAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWN 176 (236)
Q Consensus 109 ~~~~~~------------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~ 176 (236)
+.+..+ ......|.|. .... ...++.+.+..+ .+.|.|.+.+.+.+.+.+.|+
T Consensus 90 ~~~~~~~~p~~~~~~~~~~~~~t~L~V~-------------~~~~-~~~~P~v~~~~~-~~~l~C~~~g~~P~~~~v~W~ 154 (207)
T 1ypz_E 90 ADTWHISEGYELGTDKLVFGQGTQVTVE-------------PKSQ-PPAKPSVFIMKN-GTNVACLVKDFYPKEVTISLR 154 (207)
T ss_dssp EECBCCCTTCCCCCCCCEECCCEEEEEE-------------CCCC-CCCCCEEEEEEE-TTEEEEEEEEESSSCCEEEEE
T ss_pred EecCCcccccccccceeeecCccEEEEc-------------cCCC-CCCCCeEEEeCC-CCeEEEEEeeEeCCCeEEEEe
Confidence 977531 1234567776 1100 011222222222 378999998753123699999
Q ss_pred ecCeEEeeecCCCceEEEeecCcceEEEEEEcccC-CCCCeEEEEEeCCCCC
Q psy10361 177 HNEAIISYDSQRGGVNVITEKGETTVSYLLIQKAR-PSDNGKYQCNPANSQA 227 (236)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~-~~d~G~y~C~a~n~~g 227 (236)
++ ..+... . .... ...++ .+.+.... ..|.|.|+|.+.|..+
T Consensus 155 ~~-~~l~~~-~-~~~~-~~~~g-----~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 155 SS-KKIVEF-D-PAIV-ISPSG-----KYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp CS-SEEEEC-C-CEEE-ECTTS-----SEEEEECEEESSTTTCEEEEEETTE
T ss_pred cC-CcccCC-c-cceE-EcCCC-----cEEEEEeecccCCCcEEEEEEECCc
Confidence 99 665431 1 1111 12222 22222333 3678999999999875
No 274
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.33 E-value=6.2e-13 Score=107.40 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=85.0
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-ceeEEEEEEEEEEeeCCcccccCCCccccc-CCCcEEEec
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-QAHYIYLTVVVLVINDGKYLLVPEPETDII-GGPEVFIEN 153 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (236)
.+|+.+..........|.|.+++.+|+|.|+|.+.+... ......|.|. ..+...+.+. ..+...+.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~----------~~~~~~P~i~~~~~~~~~~~ 133 (434)
T 1igy_B 64 KDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVS----------SAKTTPPSVYPLAPGSAAQT 133 (434)
T ss_dssp TTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEEC----------CSCCBCCCEEEECCCCCCCC
T ss_pred cccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEc----------cCCCCCCeEEEcCCccccCC
Confidence 346655432222356899999999999999999988532 2244566665 1111111111 122223468
Q ss_pred CCeEEEEeEEeeC-CCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 154 GSTINLTCVVRFS-PEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 154 g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
|+.+.|.|.+.+. |. +..+.|++++..+...... . ..........+.|.|..+..+| |.|+|.|.|..|.
T Consensus 134 G~~v~L~C~~~g~~P~-p~~v~W~k~~~~~~~~~~~-~--~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~ 204 (434)
T 1igy_B 134 NSMVTLGCLVKGYFPE-PVTVTWNSGSLSSGVHTFP-A--VLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASS 204 (434)
T ss_dssp TTEEEEEEEEEEEBSS-CCEEEETTTTBCSSEEECC-C--EECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTT
T ss_pred CCcEEEEEEEeeecCC-CeEEEEeeCCcCCCeEecC-c--eecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCC
Confidence 9999999999886 32 2499999988643110000 0 0111112233579999999889 9999999999874
No 275
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.32 E-value=8.3e-12 Score=80.73 Aligned_cols=83 Identities=17% Similarity=0.255 Sum_probs=60.9
Q ss_pred ccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 143 IIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
...+....+..|+++.|.|.+.+. |.+ +.|++++..+... .++.+.... ....|.|.++..+|+|.|+|.|
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~--~~~-v~W~k~g~~~~~~---~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a 82 (106)
T 2dlt_A 12 LQDIADLTVKAAEQAVFKCEVSDE--KVT-GKWYKNGVEVRPS---KRITISHVG---RFHKLVIDDVRPEDEGDYTFVP 82 (106)
T ss_dssp EECCCCEEEESSCCEECCCEESCS--SCE-EEEEESSCBCCCC---SSCEEEEET---TEEEEEESSCCTTTCSCEEEEE
T ss_pred ecCCCCeEEeCCCeEEEEEEEcCC--Ccc-eEEEcCCEECcCC---CCEEEEEeC---CEEEEEECCCCcCCCEEEEEEE
Confidence 344567889999999999999887 434 9999999877432 233333332 2357999999999999999999
Q ss_pred CCCCC-ceEEEEE
Q psy10361 223 ANSQA-KSVMVNV 234 (236)
Q Consensus 223 ~n~~g-~~~~~~v 234 (236)
.|... .++.|.|
T Consensus 83 ~n~~~~~~~~l~V 95 (106)
T 2dlt_A 83 DGYALSLSAKLNF 95 (106)
T ss_dssp ETSCCCCCBCEEE
T ss_pred ccCCceEEEEEEE
Confidence 99843 3444444
No 276
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=6.1e-12 Score=81.13 Aligned_cols=85 Identities=13% Similarity=0.199 Sum_probs=61.7
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
++..+....+.+|+++.|.|.+.+.|. ++.+.|++++..+... .++.+..+. ...+|.|.++..+|+|.|+|.
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~v~~~~~-~~~v~W~k~g~~i~~~---~r~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 11 ITKRLKTMEVLEGESCSFECVLSHESA-SDPAMWTVGGKTVGSS---SRFQATRQG---RKYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CSBCCCCEEEESSCCEEEEEECSSCCC-SSCBCCBSSSSBCSBC---SSCEEEEET---TEEEEEECSCCTTTCSCEEEE
T ss_pred EEecCCCcEEcCCCcEEEEEEEcCCCC-CceeEEEECCEECCCC---CCEEEEEcC---CEEEEEECCCCHHHCEEEEEE
Confidence 334456788999999999999987742 2479999999887542 234433332 235799999999999999999
Q ss_pred eCCCCCceEEEEE
Q psy10361 222 PANSQAKSVMVNV 234 (236)
Q Consensus 222 a~n~~g~~~~~~v 234 (236)
|.|.. .++.|.|
T Consensus 84 a~~~~-~~a~L~V 95 (104)
T 2eny_A 84 VRGLT-SKASLIV 95 (104)
T ss_dssp ETTEE-EEECEEE
T ss_pred ECCee-EEEEEEE
Confidence 98754 3444444
No 277
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.31 E-value=2e-12 Score=96.12 Aligned_cols=128 Identities=15% Similarity=0.172 Sum_probs=74.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.+..+.. ....+... ..... ++...+...... ...|+.+.|.|.+.+.+
T Consensus 81 ~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~-------~~~~~-~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~ 151 (239)
T 1i1c_A 81 VSELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKP-------EGTPR-GPQVYTMAPPKE-EMTQSQVSITCMVKGFY 151 (239)
T ss_dssp EEEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCC-------SSCCB-CCEEEEECCCGG-GGGSSEEEEEEEEEEEB
T ss_pred EEEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecC-------CCCCc-CCEEEEECCChH-HhcCCcEEEEEEEeeeE
Confidence 3579999999999999999999876543 21111110 00001 111111111111 12478899999998853
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+...+.|+++|..+..... .... ...++ ....+.|.|......|.|.|+|.|.|..-
T Consensus 152 P~~~~v~W~k~g~~l~~~~~-~~~~-~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 152 PPDIYTEWKMNGQPQENYKN-TPPT-MDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp SSCCEEEEEETTEECSSEEE-CCCE-ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCeEEEEEECCEECCCcee-cCce-ECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 23358999999987642110 1111 12222 23334566666555679999999999873
No 278
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=3.6e-12 Score=80.89 Aligned_cols=73 Identities=23% Similarity=0.513 Sum_probs=56.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+..|+++.|.|.+.+.| .+.+.|++++..+... .+ ..|.|.++..+|+|.|+|.|.|.
T Consensus 17 p~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~~~~~~~~----------~~-----~~L~i~~v~~~d~G~Y~C~a~n~ 79 (96)
T 2ens_A 17 PEGGAVAPGGTVTLTCEVPAQP--SPQIHWMKDGVPLPLP----------PS-----PVLILPEIGPQDQGTYSCVATHS 79 (96)
T ss_dssp STTSEECTTCEEEEECCCSSCS--SCCCCCEESSSBCSSC----------CC-----SEEEEESCCTTTCEEEECEECCS
T ss_pred CCCCEEcCCCeEEEEEEEccCC--CCEEEEEECCEECcCC----------CC-----CEEEECCCCcccCEEEEEEEEeC
Confidence 4466789999999999998884 4599999998766421 11 27999999999999999999997
Q ss_pred CC-----ceEEEEEc
Q psy10361 226 QA-----KSVMVNVL 235 (236)
Q Consensus 226 ~g-----~~~~~~v~ 235 (236)
.+ ..+.|.|.
T Consensus 80 ~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 80 SHGPQESRAVSISII 94 (96)
T ss_dssp SCCCEECCCEEEEEC
T ss_pred CCCcEEEEEEEEEEe
Confidence 54 34555554
No 279
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.30 E-value=4.7e-11 Score=77.57 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=58.7
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeec--CcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEK--GETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
.+....+..|+++.|.|.+.+.|.|.+.+.|++++..+............... .......|.|.++..+|+|.|+|.|
T Consensus 16 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 95 (112)
T 3so5_A 16 QPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVI 95 (112)
T ss_dssp CCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEE
Confidence 34567888999999999999876566799999999876421100000000000 0012358999999999999999999
Q ss_pred CCCCCc
Q psy10361 223 ANSQAK 228 (236)
Q Consensus 223 ~n~~g~ 228 (236)
.|..|.
T Consensus 96 ~n~~g~ 101 (112)
T 3so5_A 96 SNHFGS 101 (112)
T ss_dssp EETTEE
T ss_pred EeCCCc
Confidence 999974
No 280
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.30 E-value=5.2e-11 Score=76.98 Aligned_cols=89 Identities=18% Similarity=0.326 Sum_probs=61.6
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-EEeeec----CCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-IISYDS----QRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
++..+....+.+|+++.|.|.+.+.| .+.+.|++++. .+.... ...++.+..... ...+|.|.++..+|+|
T Consensus 9 ~~~~~~~~~v~~G~~v~L~C~~~~~~--~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 9 QFPLTQNVTVVEGGTAILTCRVDQND--NTSLQWSNPAQQTLYFDDKKALRDNRIELVRASW--HELSISVSDVSLSDEG 84 (108)
T ss_dssp CCEECCCEEEETTSCEEEEEEESSCS--SCCEEEECTTCCEEEETTEECSCCTTEEEEEESS--SEEEEEECSCCGGGCE
T ss_pred ccccCCeeEEEeCCcEEEEeEEcCCC--ccEEEEEcCCCceEEEcCCcccccCcEEEeecCC--CcEEEEECCCChhHCe
Confidence 44446678899999999999999874 45899999875 222111 122333322211 3468999999999999
Q ss_pred EEEEEeCCCCC---ceEEEEEc
Q psy10361 217 KYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 217 ~y~C~a~n~~g---~~~~~~v~ 235 (236)
.|+|.+.| .| ..+.|.|+
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEE
T ss_pred EEEEEEEc-CCCcEEEEEEEEE
Confidence 99999999 65 34455553
No 281
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=1.9e-11 Score=78.51 Aligned_cols=82 Identities=21% Similarity=0.382 Sum_probs=60.9
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+..|+++.|.|.+.+ | .+.+.|++++..+.. ..+....... ..+.|.|.++..+|+|.|+|.|.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~-~--~~~v~W~k~g~~~~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 13 KPLEDQWVAPGEDVELRCELSR-A--GTPVHWLKDRKAIRK---SQKYDVVCEG---TMAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp ECCCCEEECTTSCEEECCEESS-S--SCCCCEEESSCBCCC---SSSEEEEEET---TEEEEEESSCCTTTCSEEEEECS
T ss_pred ecCCccEEcCCCCEEEEEEEeC-C--CCcEEEEECCEEccC---CCCEEEEECC---CEEEEEECCCCcccCEEEEEEEc
Confidence 3455788899999999999986 3 348999999987743 2234433333 24579999999999999999999
Q ss_pred CCCCceEEEEEc
Q psy10361 224 NSQAKSVMVNVL 235 (236)
Q Consensus 224 n~~g~~~~~~v~ 235 (236)
|. ..++.|.|.
T Consensus 84 n~-~~~~~l~V~ 94 (103)
T 2edf_A 84 AS-KSTASLHVE 94 (103)
T ss_dssp SC-EEEEEEEEC
T ss_pred cC-CcEEEEEEe
Confidence 93 455566654
No 282
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=3.4e-11 Score=77.39 Aligned_cols=84 Identities=19% Similarity=0.211 Sum_probs=60.7
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+ | .+.+.|++++..+.... ..++.+.... ....|.|.++..+|+|.|+|.|.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~~~~-~--~~~v~W~k~g~~l~~~~-~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 12 KQLEDTTAYCGERVELECEVSE-D--DANVKWFKNGEEIIPGP-KSRYRIRVEG---KKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp BCCCCEEEETTEEEEEEEECSS-S--SCCCEEEETTEECCCST-TCSEEEEEET---TEEEEEEEEECTTTCSEEEEEET
T ss_pred ccCCCEEEECCCCEEEEEEecC-C--CCeEEEEECCEECCCCC-ceEEEEEEcC---CEEEEEECCCCcccCEEEEEEEC
Confidence 3455788899999999999976 3 35999999998875422 1133433332 23579999999999999999999
Q ss_pred CCCCceEEEEEc
Q psy10361 224 NSQAKSVMVNVL 235 (236)
Q Consensus 224 n~~g~~~~~~v~ 235 (236)
| ...++.|.|.
T Consensus 85 n-~~~~~~l~V~ 95 (103)
T 1x44_A 85 G-GQSSAKLSVD 95 (103)
T ss_dssp T-EEEEEEEEEE
T ss_pred C-CcEEEEEEEe
Confidence 9 3344555553
No 283
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.29 E-value=1.5e-11 Score=91.01 Aligned_cols=130 Identities=11% Similarity=0.052 Sum_probs=78.0
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEP 169 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 169 (236)
..|.|.+++.+|.|.|+|.+.+.... ..+.+.|.. .+.... ++...+..+.... ..+..+.|.|.+.+.+.+
T Consensus 77 s~L~I~~~~~~D~g~Y~C~~~~~~~~-~~~~~~v~~-----~~~~~~-~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~ 148 (231)
T 2w59_A 77 SAVPVSTQDWLSGERFTCTVQHEELP-LPLSKSVYR-----NTGPTT-PPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPR 148 (231)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCS-SCEEEEECC-----CCSCCB-CCEEEEECCCGGG-GGSSEEEEEEEEEEEBSS
T ss_pred EEEEecchhccCCCEEEEEEEcCCCC-CceEEEEec-----CCCCCc-CCEEEEeCCCHHH-hccCceEEEEEEEeccCC
Confidence 46999999999999999999986543 223444430 000000 1111111111111 125579999999985323
Q ss_pred CCeEEEeecCeEEeeecCCCceEEE---------ee-cCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 170 PAYIFWNHNEAIISYDSQRGGVNVI---------TE-KGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 170 ~~~v~W~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.|++++..+............ .+ ......+.|.|.....+|.|.|+|.|.|...
T Consensus 149 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 149 DIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp CCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 3689999999887532100000011 11 2223456788888888889999999999875
No 284
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.29 E-value=6.5e-12 Score=82.72 Aligned_cols=81 Identities=16% Similarity=0.306 Sum_probs=54.3
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCc-eEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGG-VNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
.+....+..|+++.|.|.+.|.| .+.+.|++++..+.......+ ......++......+.+.++..+|.|.|.|.|.
T Consensus 15 ~p~~~~v~~G~~v~L~C~~~g~P--~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~ 92 (117)
T 2v9t_A 15 HPSDLIVSKGEPATLNCKAEGRP--TPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVAR 92 (117)
T ss_dssp CCCCEEECTTCCEEECCEEEEES--CCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEE
T ss_pred CCCCEEEcCCCcEEEEEECCccC--CCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEE
Confidence 34567889999999999999985 458999999988754221111 112222321111112223567999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 93 N~~G 96 (117)
T 2v9t_A 93 NYLG 96 (117)
T ss_dssp ETTE
T ss_pred eCcc
Confidence 9998
No 285
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.28 E-value=1.4e-12 Score=101.24 Aligned_cols=126 Identities=16% Similarity=0.136 Sum_probs=75.7
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEP 169 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 169 (236)
..|.|.....+|.|.|+|.+.+..+... ..+.+.. ......+...+..+....+..|+++.|.|.+.+.+ |
T Consensus 72 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~-~~~~~~~-------~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~-P 142 (323)
T 2wqr_A 72 SELTLSQKHWLSDRTYTCQVTYQGHTFE-DSTKKCA-------DSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLA-P 142 (323)
T ss_dssp EEEEEEHHHHHTTCCEEEEEEETTEEEE-EEECCCC-------CSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEEC-C
T ss_pred EEEEEcHHHcCCCCcEEEEEEeCCCCcc-eeeecCC-------CCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccC-C
Confidence 3578888888899999999998754321 1111100 00000111122223334467899999999998863 3
Q ss_pred CC---eEEEeecC-eEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 170 PA---YIFWNHNE-AIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 170 ~~---~v~W~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+ .+.|++++ ..+.. . ........++ ....+.|.|.++..+|+|.|+|.|.|..+
T Consensus 143 ~p~~~~i~W~k~~g~~~~~-~--~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 143 SKGTVQLTWSRASGKPVNH-S--TRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp CSSCCEEEEEETTCCCCCC-C--CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred CCCceEEEEEECCCccccc-c--cCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC
Confidence 33 89999975 33321 1 0111001111 12345799999999999999999999873
No 286
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=2.9e-11 Score=78.62 Aligned_cols=87 Identities=14% Similarity=0.159 Sum_probs=64.3
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCC-------ceEEEeecCcceEEEEEEcccCCCC
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRG-------GVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
++..+.+..+.+|+++.|.|.+.+. | .+.|+++|..+......+ ++.+.. ++ ...+|.|.++..+|
T Consensus 11 ~~~~l~d~~v~eG~~a~f~C~vs~~--p--~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~-~g--~~~~L~I~~v~~~D 83 (112)
T 2e6q_A 11 LVAGLEDVQVYDGEDAVFSLDLSTI--I--QGTWFLNGEELKSNEPEGQVEPGALRYRIEQ-KG--LQHRLILHAVKHQD 83 (112)
T ss_dssp EEECCCCEEEETTCEEEEEEEESSC--C--CCEEEESSCBCCSSCCCTTSCTTSCEEEECC-BT--TEEEEEEESCCSTT
T ss_pred EecCCCCeEEcCCCcEEEEEEECCC--C--eEEEEECCEECccCcccccccccccEEEEEe-CC--cEEEEEECCCCHHH
Confidence 4455678899999999999999862 4 899999999886532111 334322 22 34689999999999
Q ss_pred CeEEEEEeCCCCCceEEEEEc
Q psy10361 215 NGKYQCNPANSQAKSVMVNVL 235 (236)
Q Consensus 215 ~G~y~C~a~n~~g~~~~~~v~ 235 (236)
+|.|+|...+....++.|.|.
T Consensus 84 ~G~Y~~~~~~~~~ssA~L~V~ 104 (112)
T 2e6q_A 84 SGALVGFSCPGVQDSAALTIQ 104 (112)
T ss_dssp CSEEEEEEETTEEEEEEEEEE
T ss_pred CccEEEEEECCeeEEEEEEEe
Confidence 999988666666677777774
No 287
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.28 E-value=1.9e-11 Score=93.09 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=66.7
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCc--eeEEEEEEEEEEeeCCcccccCCCcccccCCCc---EEEecCCeEEEEeEE
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQ--AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPE---VFIENGSTINLTCVV 163 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~l~C~~ 163 (236)
...|.|.+++.+|+|.|+|.+.|..+. .....+.+.+ ..+..+.+..... ..+.+|+++.|.|.+
T Consensus 50 ~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v----------~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~ 119 (289)
T 3mjg_X 50 SSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFV----------PDPTVGFLPNDAEELFIFLTEITEITIPCRV 119 (289)
T ss_dssp EEEEEECSCCGGGCEEEEEECCC------CCCEEEEEEC----------CCTTCCBCCCCHHHHEEEESSCCCEEECCCB
T ss_pred eEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEE----------ECCCcCcccCCCCcceEEeecCCeEEEEeEc
Confidence 468999999999999999999987643 2233444441 1012222222222 678899999999999
Q ss_pred eeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 164 RFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 164 ~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
. .| .+.+.|++.+..... ........ .+. ...|+|.|+|.|.|..+
T Consensus 120 ~-~p--~~~v~w~~~~~~~~~-----~~~~~~~~------~~~----~~~d~G~Y~C~a~n~~~ 165 (289)
T 3mjg_X 120 T-DP--QLVVTLHEKKGDVAL-----PVPYDHQR------GFS----GIFEDRSYICKTTIGDR 165 (289)
T ss_dssp S-CT--TSCEEEEESSCCSCC-----CCCEETTT------EEE----ECCCSSEEEEEEEETTE
T ss_pred C-CC--CceEEEEeCCCCCcc-----ceeecCCc------Cee----eeccCcEEEEEEEeCCc
Confidence 8 53 347888776421110 00000111 111 35799999999998765
No 288
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.27 E-value=8e-11 Score=74.45 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=59.5
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+ +. |.+.+.|++++..+... .++.+.... ....|.|.++..+|+|.|+|.|.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~-~~--p~~~v~W~k~~~~l~~~---~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~ag 83 (95)
T 2k1m_A 13 KKPRSVEVAAGSPAVFEAET-ER--AGVKVRWQRGGSDISAS---NKYGLATEG---TRHTLTVREVGPADQGSYAVIAG 83 (95)
T ss_dssp BCCCCEEEETTSCEEEEEEC-SS--SSCCCEEECSSSEECSS---TTCEEEEET---TEEEEEESSCCTTCCSEEEEEET
T ss_pred eCCCcEEEeCCCcEEEEEEe-CC--CCCeEEEEECCEECCCC---CcEEEEEcC---CEEEEEEcCCCcccCEEEEEEEC
Confidence 34567889999999999999 55 44589999999887532 233333332 23579999999999999999994
Q ss_pred CCCCceEEEEEc
Q psy10361 224 NSQAKSVMVNVL 235 (236)
Q Consensus 224 n~~g~~~~~~v~ 235 (236)
+. ..++.|.|.
T Consensus 84 ~~-~~~~~l~V~ 94 (95)
T 2k1m_A 84 SS-KVKFDLKVI 94 (95)
T ss_dssp TE-EEEEEEEEE
T ss_pred Cc-eEEEEEEEe
Confidence 42 244566654
No 289
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.27 E-value=2.7e-11 Score=76.61 Aligned_cols=76 Identities=25% Similarity=0.458 Sum_probs=58.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+. | .+.|++++..+.. ..+... ... .|.|.++..+|+|.|+|.|.|.
T Consensus 8 p~~~~v~~G~~~~l~C~~~~~--p--~v~W~k~g~~~~~---~~~~~~--~~~-----~L~i~~~~~~D~G~Y~C~a~n~ 73 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKDA--A--VISWTKDGVHLGP---NNRTVL--IGE-----YLQIKGATPRDSGLYACTAART 73 (95)
T ss_dssp CEEEEECTTSCEEEECCCCTT--C--EEEEEETTEEECC---CSSEEE--ETT-----EEEECSCCGGGCEEEEEEEECS
T ss_pred CCcEEECCCCEEEEEEEeCCC--C--EEEEEECCEECCC---CceEEE--eCC-----EEEECcCCcccCEEEEEEEccC
Confidence 446778899999999999763 4 9999999988743 223332 222 7999999999999999999999
Q ss_pred CC---ceEEEEEc
Q psy10361 226 QA---KSVMVNVL 235 (236)
Q Consensus 226 ~g---~~~~~~v~ 235 (236)
.| ..+.|.|.
T Consensus 74 ~g~~~~~~~l~V~ 86 (95)
T 4hwu_A 74 VDSETWIFMVNVT 86 (95)
T ss_dssp SCEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEe
Confidence 98 34445554
No 290
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.26 E-value=5e-11 Score=75.80 Aligned_cols=76 Identities=22% Similarity=0.406 Sum_probs=56.0
Q ss_pred CCcEEEecCCeEEEEeEEe-eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCVVR-FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~-~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
+....+.+|+++.|.|.+. +. |.+.+.|++++..... ... ...++ +|.|.++..+|+|.|.|.|.|
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~--p~~~v~W~k~~~~~~~----~~~--~~~~~-----~L~i~~v~~~D~G~Y~C~a~n 83 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKS--PAYTLVWTRLHNGKLP----SRA--MDFNG-----ILTIRNVQPSDAGTYVCTGSN 83 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESS--SCCEEEEEEGGGBCCC----TTE--EEETT-----EEEECSCCGGGCEEEEEEEEC
T ss_pred CCCeEEecCCCEEEEEeCCCCC--CCcEEEEEeCCCCCCC----cee--ecCCC-----EEEEeCCChhhCEEEEEEecC
Confidence 4567889999999999998 56 4469999997543211 111 12222 799999999999999999999
Q ss_pred CCC---ceEEEEE
Q psy10361 225 SQA---KSVMVNV 234 (236)
Q Consensus 225 ~~g---~~~~~~v 234 (236)
..| .++.|.|
T Consensus 84 ~~g~~~~~~~l~V 96 (98)
T 1gl4_B 84 MFAMDQGTATLHV 96 (98)
T ss_dssp SSCEEEEEEEEEE
T ss_pred CCCccccEEEEEE
Confidence 998 3344444
No 291
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.24 E-value=1.8e-11 Score=82.95 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=59.4
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeec-------CCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDS-------QRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
++..+....+.+|+++.|.|.+.+.| .+.+.|++++..+.... ...+.............+|.|.++..+|
T Consensus 24 ~~~~p~~~~v~~G~~v~L~C~~~g~P--~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 101 (137)
T 3qr2_A 24 FVQAPLSQQRWVGGSVELHCEAVGSP--VPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEED 101 (137)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSS--CCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGG
T ss_pred EEcCCCCEEEeCCCCEEEEEEEeeec--CCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCccc
Confidence 34456678889999999999999985 45999999765432100 0112222211112234689999999999
Q ss_pred CeEEEEEeCCCCCc
Q psy10361 215 NGKYQCNPANSQAK 228 (236)
Q Consensus 215 ~G~y~C~a~n~~g~ 228 (236)
+|.|.|.|.|..|.
T Consensus 102 ~G~Y~C~a~N~~G~ 115 (137)
T 3qr2_A 102 TGTYECRASNDPDR 115 (137)
T ss_dssp CEEEEEEEECCTTS
T ss_pred CEEEEEEEEecCCc
Confidence 99999999999873
No 292
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.24 E-value=1e-10 Score=84.65 Aligned_cols=98 Identities=9% Similarity=0.093 Sum_probs=60.2
Q ss_pred ceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce----------------------------eEE------ecce
Q psy10361 24 RFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD----------------------------IHL------LTTG 69 (236)
Q Consensus 24 r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~----------------------------~~~------~~~~ 69 (236)
++.... ...+++|.|.+++.+|+|.|.|++.+..+.. ..+ .|..
T Consensus 59 ~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P 136 (203)
T 4fa8_A 59 FFDIHR--SANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHP 136 (203)
T ss_dssp TEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCC
T ss_pred eEEEEE--cCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCC
Confidence 444444 3467899999999999999999987622110 000 1234
Q ss_pred eeEEecCCcEEEE---------cCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEE
Q psy10361 70 RYTYTNDQRFRVI---------NNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTV 123 (236)
Q Consensus 70 ~~~~~~~~~~~~~---------~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v 123 (236)
.+.|..+...... ......-..|.|.+++.+|+|.|+|.|.|..+....+.+..
T Consensus 137 ~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v~vs~ 199 (203)
T 4fa8_A 137 HVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVYVSG 199 (203)
T ss_dssp EEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEEEEEC
T ss_pred EEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEEEEE
Confidence 5677543321110 00011123456679999999999999999998876555443
No 293
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.1e-11 Score=79.37 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=60.0
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCC-CceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQR-GGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
..+....+.+|+++.|.|.+.+.| +.+.|++++..+...... .++.+.... ....|.|.++..+|+|.|+|.|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~~---~~v~W~k~g~~i~~~~~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a 86 (101)
T 2edk_A 13 TPLEDQQVFVGDRVEMAVEVSEEG---AQVMWMKNGVELTREDSFKARYRFKKDG---KRHILIFSDVVQEDRGRYQVIT 86 (101)
T ss_dssp ECCCCEEEESSCCCBCCEEESCSS---CCCEEEESSCBCCCSCCSSCCCEEEECS---SEEEEECSSCCGGGCSBEEEEC
T ss_pred ecCCceEEcCCCCEEEEEEEeCCC---CEEEEEECCEECCCCCCcceeEEEEECC---CEEEEEECCCChhhCEEEEEEE
Confidence 345567889999999999998874 589999999887542210 033333332 3457999999999999999999
Q ss_pred CCCCCceEEEEE
Q psy10361 223 ANSQAKSVMVNV 234 (236)
Q Consensus 223 ~n~~g~~~~~~v 234 (236)
.|.. .++.|.|
T Consensus 87 ~n~~-~~~~l~V 97 (101)
T 2edk_A 87 NGGQ-CEAELIV 97 (101)
T ss_dssp SSCE-ECCBEEE
T ss_pred cCCc-EEEEEEE
Confidence 9843 3334444
No 294
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.23 E-value=1.2e-12 Score=95.78 Aligned_cols=130 Identities=11% Similarity=0.110 Sum_probs=75.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++.+|+|.|+|.+.+..... ....+.+. . ...++...+..+....+..|+.+.|.|.+.+.+
T Consensus 65 ~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~i~~~----~-----~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~ 135 (214)
T 1ow0_A 65 SSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKS----G-----NTFRPEVHLLPPPSEELALNELVTLTCLARGFS 135 (214)
T ss_dssp EEECTTTHHHHHHTCEEEEEECCSSCSSCEEEEEECC----S-----SCCCCEEEEECCCTTTTTSSSEEEEEEEEEEES
T ss_pred EEEEEEeHHHcCCCCeEEEEEecCCCCCceeEeeccC----C-----CCCCCEEEecCCCHHHhccCCceEEEEEEeeeE
Confidence 4578888899999999999998865432 22222210 0 000111112222222245688899999999853
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEe---ecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVIT---EKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+.+.|++++..+............. .++ ....+.|.+......+.|.|+|.|.|..-
T Consensus 136 P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 136 PKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp SSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred CCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 1235999999998774321000001122 222 23334566665554568999999999873
No 295
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.23 E-value=4.9e-11 Score=89.80 Aligned_cols=102 Identities=21% Similarity=0.392 Sum_probs=65.3
Q ss_pred cceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce-------------------------eEEe---------cc
Q psy10361 23 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD-------------------------IHLL---------TT 68 (236)
Q Consensus 23 ~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~-------------------------~~~~---------~~ 68 (236)
.|+.+.......+.+|.|.+++.+|+|.|.|.+.+..... ..+. +.
T Consensus 71 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~ 150 (268)
T 3mj6_A 71 NRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRV 150 (268)
T ss_dssp TTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCC
T ss_pred CceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCc
Confidence 5666655445567899999999999999999987521110 0000 11
Q ss_pred eeeEEec-CCc----------------------------EEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eE
Q psy10361 69 GRYTYTN-DQR----------------------------FRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HY 118 (236)
Q Consensus 69 ~~~~~~~-~~~----------------------------~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~ 118 (236)
..+.|.+ ++. +.+..........|.|.+++.+|+|.|+|.|.|..+.. ..
T Consensus 151 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 230 (268)
T 3mj6_A 151 TKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKT 230 (268)
T ss_dssp CEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEE
Confidence 2355554 211 01110001235689999999999999999999976543 66
Q ss_pred EEEEEE
Q psy10361 119 IYLTVV 124 (236)
Q Consensus 119 ~~l~v~ 124 (236)
+.|.|.
T Consensus 231 ~~l~V~ 236 (268)
T 3mj6_A 231 IVLHVV 236 (268)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 677775
No 296
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=1.9e-10 Score=75.10 Aligned_cols=77 Identities=23% Similarity=0.354 Sum_probs=56.7
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
..+..|+++.|.|.+. . |.+.+.|++++..+... .+..+.... ....|.|.++..+|+|.|+|.|.| ...
T Consensus 23 ~~~~~G~~v~L~C~~~-~--p~~~v~W~k~g~~~~~~---~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~n-~~~ 92 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-R--PWAEVRWTKDGEEVVES---PALLLQKED---TVRRLVLPAVQLEDSGEYLCEIDD-ESA 92 (113)
T ss_dssp EEEETTCCEEEEEEES-C--TTCCCEEEETTEECCCB---TTBEEEECS---SEEEEEESSCCTTTCEEEEEESSS-CEE
T ss_pred EEEEcCCeEEEEEEec-C--CCCeEEEEECCEECccC---CCEEEEECC---CEEEEEECCCCcccCEEEEEEEec-CcE
Confidence 6778999999999995 5 55689999999887542 233333222 234899999999999999999999 334
Q ss_pred eEEEEEc
Q psy10361 229 SVMVNVL 235 (236)
Q Consensus 229 ~~~~~v~ 235 (236)
.+.|.|.
T Consensus 93 ~~~l~V~ 99 (113)
T 2cpc_A 93 SFTVTVT 99 (113)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555553
No 297
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.22 E-value=8.7e-11 Score=93.13 Aligned_cols=129 Identities=14% Similarity=0.100 Sum_probs=77.9
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|..++.+|.|.|+|.+.+..... ....+.+.. .... ++...+. +.......|+.+.|.|.+.+.+
T Consensus 232 ~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~-------~~~~-~P~v~v~-~~~~~~~~g~~~~L~C~~~g~~ 302 (376)
T 2aty_A 232 VSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK-------GRPK-APQLYTI-PPPKEQMAKDKVSLTCMITDFF 302 (376)
T ss_pred EEEEEechHhccCCCEEEEEEecCCCCCceEEEEcCCC-------CCCc-CCeEEee-CCCHHHhcCCceEEEEEEEEeE
Confidence 3479999999999999999998865422 212221100 0001 1111111 2222223488999999999863
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+...+.|++++..+.... ........+......+.|.|.....+|.|.|+|.|.|..-
T Consensus 303 P~~i~v~W~k~g~~~~~~~-~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 303 PEDITVEWQWNGQPAENYK-NTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCCcEEEEEECCEECCCeE-eCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 2346899999998763211 1111111222234456788887777889999999999863
No 298
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=1.5e-10 Score=74.46 Aligned_cols=79 Identities=20% Similarity=0.213 Sum_probs=57.5
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
...+.+|+++.|.|.+ +. |.+.+.|++++..+.... .++.+.... ....|.|.++..+|+|.|+|.|.|..
T Consensus 25 ~~~v~~G~~v~L~C~~-~~--p~~~v~W~k~g~~l~~~~--~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~~~~- 95 (104)
T 1pd6_A 25 AYQVSKGHKIRLTVEL-AD--HDAEVKWLKNGQEIQMSG--SKYIFESIG---AKRTLTISQCSLADDAAYQCVVGGEK- 95 (104)
T ss_dssp EEEEETTSCEEEEEEC-SS--SSSCCEEEESSSEECCCS--SSSEEEEET---TEEEEEECSCSSSSCEEEEEEETTEE-
T ss_pred cEEEecCCCEEEEEEE-cC--CCCEEEEEECCEECCCCC--CeEEEEecC---CEEEEEECCCCcccCEEEEEEECCCc-
Confidence 3788999999999999 56 445899999998885421 233333233 24589999999999999999996644
Q ss_pred ceEEEEEc
Q psy10361 228 KSVMVNVL 235 (236)
Q Consensus 228 ~~~~~~v~ 235 (236)
.++.|.|.
T Consensus 96 ~~~~l~V~ 103 (104)
T 1pd6_A 96 CSTELFVK 103 (104)
T ss_dssp ECCEEEEE
T ss_pred EEEEEEEe
Confidence 33445553
No 299
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.7e-11 Score=78.25 Aligned_cols=67 Identities=18% Similarity=0.406 Sum_probs=53.0
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
...+..|+.+.|.|.+.+. | +.+.|++++..+.. ..+..+. . ..|.|.++..+|.|.|+|.|.|..|
T Consensus 12 ~~~v~~G~~v~L~C~~~g~--p-p~i~W~k~g~~~~~---~~~~~~~--~-----~~L~i~~v~~~D~G~Y~C~a~n~~g 78 (99)
T 2cr3_A 12 SFLVHPGDLLQLRCRLRDD--V-QSINWLRDGVQLAE---SNRTRIT--G-----EEVEVQDSVPADSGLYACVTSSPSG 78 (99)
T ss_dssp ECCBCTTSCEEEECCCCSS--C-CEEEEEESSSBCCC---CSSEEEC--S-----SEEEETTCCTTTCEEEEEEEEETTE
T ss_pred CeEEeCCCcEEEEEEecCC--C-CeEEEEECCEECCC---CCcEEEE--C-----CEEEEccCCHHHCEEEEEEEEeCCc
Confidence 4556789999999999886 4 39999999977643 1233321 2 2799999999999999999999998
No 300
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.21 E-value=1.9e-10 Score=73.41 Aligned_cols=77 Identities=14% Similarity=0.218 Sum_probs=56.2
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
..+..|+++.|.|.+. . |.+.+.|++++..+... .++.+.... ....|.|.++..+|+|.|+|.|.+ ...
T Consensus 18 ~~v~~G~~v~l~C~~~-~--p~~~v~W~k~g~~i~~~---~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~ag~-~~~ 87 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA-D--PKLEVKWYKNGQEIRPS---TKYIFEHKG---CQRILFINNCQMTDDSEYYVTAGD-EKC 87 (100)
T ss_dssp EEECTTEEEEEEEEES-C--TTSCEEEEESSCBCCCB---TTEEEEEET---TEEEEEEEEECTTTCCEEEEEETT-EEE
T ss_pred cEEcCCCcEEEEEEec-C--CCceEEEEECCEECCCC---CCEEEEecC---CEEEEEEcCCCcCcCEEEEEEECC-ceE
Confidence 6788999999999997 5 55699999999877432 234443333 234799999999999999999922 224
Q ss_pred eEEEEEc
Q psy10361 229 SVMVNVL 235 (236)
Q Consensus 229 ~~~~~v~ 235 (236)
++.|.|.
T Consensus 88 ~~~l~V~ 94 (100)
T 2yuv_A 88 STELFVR 94 (100)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 5556554
No 301
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.20 E-value=7.2e-11 Score=85.61 Aligned_cols=124 Identities=18% Similarity=0.289 Sum_probs=73.5
Q ss_pred CeeEeeCC-------eEEEEecceEecC-----CcceEEee-cCCCCceEEEEcCCCCCCCeeEEEEEEEEecce-----
Q psy10361 1 VSFVRHRD-------IHLLTTGRYTYTN-----DQRFRVIN-NPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD----- 62 (236)
Q Consensus 1 v~w~~~~~-------~~~~~~~~~~~~~-----~~r~~~~~-~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~----- 62 (236)
|.|++... ..++..++..... ..|+.+.. .....+.+|.|.+++.+|+|.|.|.+.+..+..
T Consensus 36 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 115 (214)
T 3jz7_A 36 IEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFL 115 (214)
T ss_dssp EEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCccccEEE
Confidence 46887431 3333444444432 56776654 223457899999999999999999987522110
Q ss_pred eEEe------------------------------cceeeEEecCCc-EEEE--cCCCCCcEEEEEcCCCCCCCEEEEEEe
Q psy10361 63 IHLL------------------------------TTGRYTYTNDQR-FRVI--NNPTSDDWTLQLKYPQHKDTGIYECQV 109 (236)
Q Consensus 63 ~~~~------------------------------~~~~~~~~~~~~-~~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 109 (236)
..+. +...+.|.+++. .... .........|.|.+++.+|+|.|+|.|
T Consensus 116 l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 195 (214)
T 3jz7_A 116 LTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTV 195 (214)
T ss_dssp EEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEE
T ss_pred EEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEE
Confidence 0000 112344544211 0000 000123458999999999999999999
Q ss_pred ecCCCce-eEEEEEEE
Q psy10361 110 STTPHQA-HYIYLTVV 124 (236)
Q Consensus 110 ~~~~~~~-~~~~l~v~ 124 (236)
.|..+.. ..+.|.|.
T Consensus 196 ~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 196 QNRVGSDQCMLRLDVV 211 (214)
T ss_dssp ECSSCEEEEEEEECCB
T ss_pred EcCCCcEEEEEEEEEe
Confidence 9987654 55555554
No 302
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.20 E-value=2.3e-11 Score=91.92 Aligned_cols=138 Identities=16% Similarity=0.217 Sum_probs=80.2
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecC-------C-------------------CceeEEEEEEEEEEee
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTT-------P-------------------HQAHYIYLTVVVLVIN 129 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~-------~-------------------~~~~~~~l~v~~~~~~ 129 (236)
.+|+.+.........+|.|.+++.+|+|.|.|.+.+. . .......|.|.
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~----- 162 (267)
T 3u1s_H 88 QGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVS----- 162 (267)
T ss_dssp TTTEEEEECGGGCCEEEEECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEEC-----
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEec-----
Confidence 4677776554446678999999999999999998621 0 01122344443
Q ss_pred CCcccccCCCccccc--CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEE
Q psy10361 130 DGKYLLVPEPETDII--GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLI 207 (236)
Q Consensus 130 ~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 207 (236)
..+...+.+. .+.. ....|+.+.|.|.+.+...+...+.| ++..+.............+......+.|.|
T Consensus 163 -----~~~~~~P~v~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i 234 (267)
T 3u1s_H 163 -----SASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTV 234 (267)
T ss_dssp -----CCCCBCCEEEEECCCG-GGEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEE
T ss_pred -----CCCCCCCEEEEecCCc-ccCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEE
Confidence 0111122221 2221 12468999999999874312468999 443331100000011111122334467889
Q ss_pred cccCCCCCeEEEEEeCCCCC
Q psy10361 208 QKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 208 ~~v~~~d~G~y~C~a~n~~g 227 (236)
.....+| +.|+|.+.+..+
T Consensus 235 ~~~~~~~-~~ytC~v~h~~~ 253 (267)
T 3u1s_H 235 PSSSLGT-QTYICNVNHKPS 253 (267)
T ss_dssp EGGGGGT-CCCEEEEEEGGG
T ss_pred CchhcCC-CEEEEEEEECCC
Confidence 8888888 999999999875
No 303
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.20 E-value=1.9e-10 Score=83.85 Aligned_cols=80 Identities=24% Similarity=0.480 Sum_probs=61.3
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
.+..+....+..|+.+.|.|.+.+.| .+.+.|++++..+.... ..++.+.... ....|.|.++..+|.|.|+|.
T Consensus 21 ~~~~p~~~~~~~G~~v~l~C~~~g~p--~p~i~W~~~g~~l~~~~-~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 21 KLQGPVAVYTWEGNQVNITCEVFAYP--SATISWFRDGQLLPSSN-YSNIKIYNTP---SASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEECCSEEEECTTCCEEEEEEEEEES--CCEEEEEETTEESSCSS-SCSEEEEEET---TEEEEEECCCSGGGCEEEEEE
T ss_pred cccCCceEEEECCCCEEEEEEEeecC--CCEEEEEECCeECCCCC-CccEEEecCC---CeeEEEEecCChhhCeEEEEE
Confidence 33445567888999999999999985 45999999998875421 1233333222 235899999999999999999
Q ss_pred eCCCCC
Q psy10361 222 PANSQA 227 (236)
Q Consensus 222 a~n~~g 227 (236)
|.|..|
T Consensus 95 a~n~~g 100 (215)
T 3mtr_A 95 AVNRIG 100 (215)
T ss_dssp EECSSC
T ss_pred EEECCC
Confidence 999998
No 304
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.20 E-value=1.2e-09 Score=77.42 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=76.6
Q ss_pred cEEEEEcCCCCCCCEEEEEEeecCC-CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCC
Q psy10361 89 DWTLQLKYPQHKDTGIYECQVSTTP-HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSP 167 (236)
Q Consensus 89 ~~~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 167 (236)
...|.|.+++. | |.|.|.+.... .....+.|+|. .++..+.+. +....+.+|+.++|.|.+.+..
T Consensus 49 ~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~-----------~~P~~v~i~-~~~~~~~~G~~~tL~C~v~g~~ 114 (185)
T 1iam_A 49 RKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVY-----------WTPERVELA-PLPSWQPVGKQLTLRCQVEGGA 114 (185)
T ss_dssp EEEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEE-----------BCCSEEEEC-CCCSEECTTSEEEEEEEEECCB
T ss_pred eeEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEe-----------CCCCCCEEc-cCCccccCCCcEEEEEEcCCcc
Confidence 35689999984 4 99999997653 44577888887 332333333 3334688999999999998852
Q ss_pred CCC--CeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe-EEEEEeCCCCC
Q psy10361 168 EPP--AYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG-KYQCNPANSQA 227 (236)
Q Consensus 168 ~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~y~C~a~n~~g 227 (236)
|. ..+.|++++..+...... . .....+|.+.. .++|.| .|+|.|.|.++
T Consensus 115 -P~~~l~i~w~kg~~~l~~~~~~-------~--~~~~~tl~~~~-~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 115 -PRAQLTVVLLRGEKELKREPAV-------G--EPAEVTTTVLV-RRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp -CGGGEEEEEEETTEEEEEEECC-------T--TTEEEEEEEEC-CSSCSSCEEEEEEEEECG
T ss_pred -CCCCcEEEEEeCCEEcccccCC-------C--ccccEEEEEec-eeccCCCeEEEEEEecCc
Confidence 43 258999999988542211 0 11223566554 445555 99999999985
No 305
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.19 E-value=1.5e-10 Score=82.27 Aligned_cols=86 Identities=17% Similarity=0.302 Sum_probs=58.9
Q ss_pred CceEEEEcCCCCCCCeeEEEEEEEEecce--------------------eEEe------cceeeEEecCCcEEEEcCCCC
Q psy10361 34 DDWTLQLKYPQHKDTGIYECQVSFVRHRD--------------------IHLL------TTGRYTYTNDQRFRVINNPTS 87 (236)
Q Consensus 34 ~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~--------------------~~~~------~~~~~~~~~~~~~~~~~~~~~ 87 (236)
++.+|.|.+++.+|+|.|.|.+.+..+.- ..+. +...+.|.+++.....
T Consensus 66 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~----- 140 (184)
T 2ny1_B 66 GNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----- 140 (184)
T ss_dssp TBCCEEECSCCGGGCEEEEEEETTEEEEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE-----
T ss_pred CeEEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc-----
Confidence 46689999999999999999887543210 0000 1224555554433222
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCc-eeEEEEEEE
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQ-AHYIYLTVV 124 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~ 124 (236)
....|.|.+++.+|+|.|+|.+.+..+. +..+.|.|.
T Consensus 141 ~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 141 GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 3568999999999999999999987654 356667666
No 306
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.18 E-value=1e-12 Score=87.31 Aligned_cols=81 Identities=25% Similarity=0.393 Sum_probs=58.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEe-ecCcceEEEEEEcccCCCCC-eEEEEEeC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVIT-EKGETTVSYLLIQKARPSDN-GKYQCNPA 223 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~i~~v~~~d~-G~y~C~a~ 223 (236)
+....+.+|+++.|.|.+.+.|.| ..+.|++++..+.... ..++.... .......+.|.|.++..+|. |.|+|.|.
T Consensus 20 ~~~~~~~~G~~v~l~C~~~g~P~p-~~i~W~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~ 97 (122)
T 2cry_A 20 TQTQHALHGEKGQIKCFIRSTPPP-DRIAWSWKENVLESGT-SGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAW 97 (122)
T ss_dssp ECCCCCCTTSCCCCCEEECCSSCC-SEEEEESSSCEECSEE-ETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEE
T ss_pred CCeEEEecCCCEEEEEEEeecCCC-cEeEEEECCEEccCCC-CCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEE
Confidence 445667889999999999998543 2499999998875321 12333321 11112356899999999999 99999999
Q ss_pred CCCCc
Q psy10361 224 NSQAK 228 (236)
Q Consensus 224 n~~g~ 228 (236)
|..|.
T Consensus 98 N~~G~ 102 (122)
T 2cry_A 98 NSFGS 102 (122)
T ss_dssp CSSCE
T ss_pred CCCCe
Confidence 99994
No 307
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.17 E-value=7e-11 Score=88.97 Aligned_cols=104 Identities=16% Similarity=0.305 Sum_probs=70.8
Q ss_pred EEEEcCC---CCCCCE--EEEEEeecCCCc-eeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEe
Q psy10361 91 TLQLKYP---QHKDTG--IYECQVSTTPHQ-AHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVR 164 (236)
Q Consensus 91 ~L~i~~~---~~~d~G--~Y~C~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~ 164 (236)
.+.+..+ +.+|+| .|+|.+.+..+. ...+.|.|. ..| + +.+. .....+.+|+.+.|.|.+.
T Consensus 57 ~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~----------~~p-~-p~~~-~~~~~v~~G~~v~l~C~~~ 123 (265)
T 2oz4_A 57 SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY----------SFP-A-PNVI-LTKPEVSEGTEVTVKCEAH 123 (265)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEE----------CCC-C-CEEE-ESCSEEETTCEEEEEEECC
T ss_pred eEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEe----------CCC-C-ceee-cCCceecCCCcEEEEEEcc
Confidence 4555444 778887 499999998654 366777776 122 2 2222 2344577899999999987
Q ss_pred eCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC-C
Q psy10361 165 FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ-A 227 (236)
Q Consensus 165 ~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~-g 227 (236)
|.+.+.| ++..+.. .+ ....|.+..+..+|+|.|+|.|.|.. |
T Consensus 124 ----p~~~i~W--~g~~~~~---~~-----------~~~~l~i~~~~~~~~g~Y~C~a~n~~~g 167 (265)
T 2oz4_A 124 ----PRAKVTL--NGVPAQP---LG-----------PRAQLLLKATPEDNGRSFSCSATLEVAG 167 (265)
T ss_dssp ----TTSEEEE--SSCSSSC---CS-----------SEECCEEECCGGGTTEEEEEEEEEECSS
T ss_pred ----CCCEEEE--CCEEccC---CC-----------CcEEEEEccccccCCceEEEEEEcCCCC
Confidence 3459999 6655421 10 12368888899999999999998644 5
No 308
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.16 E-value=1.1e-11 Score=90.08 Aligned_cols=118 Identities=17% Similarity=0.158 Sum_probs=64.9
Q ss_pred CCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEee
Q psy10361 99 HKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNH 177 (236)
Q Consensus 99 ~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~ 177 (236)
..|+|.|+|.+.+..+.. ....+... ..... ++...+..+.... ..|..+.|.|.+.|.+.+++.+.|++
T Consensus 77 ~~d~g~Y~C~a~n~~~~~~~~~~v~~~-------~~~~~-~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k 147 (207)
T 1l6x_A 77 WLNGKEYKCKVSNKALPAPIEKTISKA-------KGQPR-EPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWES 147 (207)
T ss_dssp HHTTCCEEEEEECTTSSSCEEEEECCC-------CSCCB-CCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred ccCCceEEEEEEcCcCCcceEEEeccC-------CCCCc-CCEEEEECCChHH-hcCCcEEEEEEEeCeECCCeEEEEEE
Confidence 344999999999876543 22222110 00001 1111112122111 24567999999998531335999999
Q ss_pred cCeEEeeecCCCceEEEeecC-cceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 178 NEAIISYDSQRGGVNVITEKG-ETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
++..+.... ..... ...++ ....+.|.+......|.|.|+|.|.|...
T Consensus 148 ~g~~~~~~~-~~~~~-~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 148 NGQPENNYK-TTPPV-LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp TTEEECCEE-ECCCE-ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCeeccCcc-ccCce-ECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 998774211 01111 12222 22334566666666789999999999874
No 309
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.15 E-value=2.7e-10 Score=74.98 Aligned_cols=69 Identities=26% Similarity=0.353 Sum_probs=50.5
Q ss_pred CeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 155 STINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 155 ~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
....|.|.+.|.| .+.+.|++++..+... ......... ........|.|.++..+|+|.|+|.|.|..|
T Consensus 21 ~~~~l~C~~~g~P--~p~i~W~k~g~~l~~~-~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G 89 (118)
T 1wwc_A 21 LEHCIEFVVRGNP--PPTLHWLHNGQPLRES-KIIHVEYYQ-EGEISEGCLLFNKPTHYNNGNYTLIAKNPLG 89 (118)
T ss_dssp CEEEEEEEEECSS--CCEEEEEETTEECCCS-SSEEEEEEE-CSSEEEEEEEEESCCGGGCEEEEEEEEETTE
T ss_pred cceEEEEEeeeeC--CCeEEEEECCEECCCC-CceeEEEec-cCccccEEEEECCCChhcCEEEEEEEECCCC
Confidence 5678999999984 4599999999887542 111222111 1112345899999999999999999999998
No 310
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.15 E-value=3.8e-10 Score=75.02 Aligned_cols=84 Identities=18% Similarity=0.347 Sum_probs=57.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-----cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-----SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQC 220 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C 220 (236)
+..+.+.+|+++.|.|.+.+.| .+.+.|++.+..+... ....+..+.... ....+|.|.+++.+|+|.|.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p--~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~L~I~~v~~~DsG~Y~C 83 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRK--NSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHS--ANQLSITVPNVTLQDEGVYKC 83 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCT--TCEEEEECTTSCEEEETTEECSCSSCCEEEEEE--TTEEEEEESSCCGGGCEEEEE
T ss_pred CccEEEcCCCCEEEEeEEeccC--CCEEEEECCCCeEEEEeccccccCCcEEEEeCC--CCEEEEEECCCChHHCEEEEE
Confidence 3467888999999999999874 4599999766543210 112233332211 123589999999999999999
Q ss_pred EeCCCCC---ceEEEEE
Q psy10361 221 NPANSQA---KSVMVNV 234 (236)
Q Consensus 221 ~a~n~~g---~~~~~~v 234 (236)
.+.|. | ..+.|.|
T Consensus 84 ~a~n~-g~~~~~~~l~V 99 (124)
T 3rbg_A 84 LHYSD-SVSTKEVKVIV 99 (124)
T ss_dssp EEESS-SEEEEEEEEEE
T ss_pred EEEcC-CCCcEEEEEEE
Confidence 99998 6 3344444
No 311
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.14 E-value=4e-10 Score=72.24 Aligned_cols=73 Identities=18% Similarity=0.398 Sum_probs=55.0
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+. |.+ +.|++++..+.. ..++.+.... ....|.|.++..+|+|.|+|.+.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~--p~~-v~W~k~~~~l~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~~g 83 (103)
T 2e7b_A 13 EALKDLEVLEGGAATLRCVLSSV--AAP-VKWCYGNNVLRP---GDKYSLRQEG---AMLELVVRNLRPQDSGRYSCSFG 83 (103)
T ss_dssp BCCCCEEEESSSCEEEEEECSSC--CCS-CEEEESSSBCCC---SSSEEEEECS---SEEEEEECSCCTTTCCCEEEECS
T ss_pred ecCccEEEECCCcEEEEEEEeCC--CCC-eEEEECCEECCC---CCcEEEEEcC---CEEEEEEccCCcccCEEEEEEEC
Confidence 34567889999999999999887 445 999999887742 2244443332 34579999999999999999955
Q ss_pred CC
Q psy10361 224 NS 225 (236)
Q Consensus 224 n~ 225 (236)
+.
T Consensus 84 ~~ 85 (103)
T 2e7b_A 84 DQ 85 (103)
T ss_dssp SC
T ss_pred Cc
Confidence 43
No 312
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.14 E-value=6.4e-10 Score=80.57 Aligned_cols=104 Identities=12% Similarity=0.126 Sum_probs=68.2
Q ss_pred EecCCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecc------------------------------------
Q psy10361 18 TYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHR------------------------------------ 61 (236)
Q Consensus 18 ~~~~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~------------------------------------ 61 (236)
....+.|+.+... +...+|.|.+++.+|+|.|.|.+.+..+.
T Consensus 43 ~i~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 120 (212)
T 2r15_A 43 AIRYSDRVKTGVT--GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL 120 (212)
T ss_dssp ECCCCSSEEEEEE--TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEE
T ss_pred EccCCCeEEEEEe--CCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCccc
Confidence 3445567766553 34678999999999999999998752211
Q ss_pred -----eeEEe--------------cceeeEEecCCcEE-------EEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCc
Q psy10361 62 -----DIHLL--------------TTGRYTYTNDQRFR-------VINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQ 115 (236)
Q Consensus 62 -----~~~~~--------------~~~~~~~~~~~~~~-------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 115 (236)
...+. +...+.|.+++... .... ......|.|.+++.+|+|.|+|.|.|..+.
T Consensus 121 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~ 199 (212)
T 2r15_A 121 GGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFE-AGRTAYFTINGVSTADSGKYGLVVKNKYGS 199 (212)
T ss_dssp EBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEE-TTTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEc-CCCEEEEEEcCcchHHCeEEEEEEEcCCCc
Confidence 00000 12246666655332 1111 023458999999999999999999998865
Q ss_pred e-eEEEEEEE
Q psy10361 116 A-HYIYLTVV 124 (236)
Q Consensus 116 ~-~~~~l~v~ 124 (236)
. ..+.|.|.
T Consensus 200 ~~~~~~l~V~ 209 (212)
T 2r15_A 200 ETSDFTVSVF 209 (212)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 4 56666665
No 313
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=1.1e-09 Score=70.14 Aligned_cols=82 Identities=18% Similarity=0.236 Sum_probs=58.2
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.. +. |.+.+.|++++..+.. ..++.+.... ....|.|.++..+|+|.|+|.+.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~-~~--p~~~v~W~k~~~~l~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~~g 83 (103)
T 2dku_A 13 EELTNLQVEEKGTAVFTCKT-EH--PAATVTWRKGLLELRA---SGKHQPSQEG---LTLRLTISALEKADSDTYTCDIG 83 (103)
T ss_dssp SCCCCEEEETTSEEEEEEEC-SS--CCSCCEEEESSCBCCS---SSSEEEEEET---TEEEEEEESCCTTTCSEEEEECS
T ss_pred ecCCcEEEeCCCcEEEEEEe-CC--CCCeEEEEeCCEECCC---CCeEEEEeCC---CEEEEEECCCCcccCEEEEEEeC
Confidence 34567889999999999994 66 4459999999987743 2234433222 33579999999999999999833
Q ss_pred CCCCceEEEEEc
Q psy10361 224 NSQAKSVMVNVL 235 (236)
Q Consensus 224 n~~g~~~~~~v~ 235 (236)
+. ...+.|.|.
T Consensus 84 ~~-~~~~~l~V~ 94 (103)
T 2dku_A 84 QA-QSRAQLLVQ 94 (103)
T ss_dssp SC-BCCEEEEEE
T ss_pred Cc-eEEEEEEEe
Confidence 22 245566554
No 314
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.13 E-value=1.3e-10 Score=82.18 Aligned_cols=104 Identities=13% Similarity=0.223 Sum_probs=64.2
Q ss_pred CeeEeeCCeEEE--EecceEecCCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecce-----eE--Ee-----
Q psy10361 1 VSFVRHRDIHLL--TTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRD-----IH--LL----- 66 (236)
Q Consensus 1 v~w~~~~~~~~~--~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~-----~~--~~----- 66 (236)
|.|++.... +. ..+......+.|+.+.. +.+|.|.+++.+|+|.|.|.+.+..+.. .. +.
T Consensus 30 i~W~k~~~~-i~~~~~~~~~~~~~~r~~~~~-----~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~ 103 (176)
T 1hng_A 30 VRWERGSTL-VAEFKRKMKPFLKSGAFEILA-----NGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSK 103 (176)
T ss_dssp EEEEETTEE-EEEEETTSCCEESSTTEEECT-----TSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCCC
T ss_pred EEEEeCCce-eEEEcCCCeecCCCCeEEECC-----CCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCC
Confidence 468765432 22 11222334567887744 3469999999999999999988643221 00 10
Q ss_pred -------------------cceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce
Q psy10361 67 -------------------TTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA 116 (236)
Q Consensus 67 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 116 (236)
+...+.|.+++....... .+.|..++.+|+|.|+|.|.|..+..
T Consensus 104 p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~------~~~i~~~~~~d~G~Y~C~a~N~~g~~ 166 (176)
T 1hng_A 104 PMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR------QKTMSYQWTNLRAPFKCKAVNRVSQE 166 (176)
T ss_dssp CEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEES------SSEEEEECSCCSSCEEEEEEETTEEE
T ss_pred CEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCC------cEEEEEEEccCCeEEEEEEEecCCCc
Confidence 112455655554332211 25566788999999999999988654
No 315
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.13 E-value=6.4e-10 Score=79.67 Aligned_cols=78 Identities=21% Similarity=0.221 Sum_probs=59.7
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+. |.+.+.|++++..+.... .+.......+ ....|.|.++..+|+|.|+|.+.
T Consensus 9 ~~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~~--~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 9 EELRNLNVRYQSNATLVCKVTGH--PKPIVKWYRQGKEIIADG--LKYRIQEFKG--GYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp ECCCCEEEETTSCEEEEEEEECS--SCCEEEEEETTEECCCCS--SSEEEEEETT--TEEEEEECSCCGGGCSEEEEEEE
T ss_pred EcCCccEEcCCCEEEEEEEEeec--CCCEEEEEECCEECccCC--CcEEEEEcCC--CEEEEEECcCCHHhCEEEEEEEE
Confidence 34557788999999999999988 445999999998875322 2333322222 33589999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 83 n~~g 86 (197)
T 2j8h_A 83 NQGG 86 (197)
T ss_dssp ETTE
T ss_pred ECCC
Confidence 9987
No 316
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.13 E-value=2.9e-10 Score=73.58 Aligned_cols=72 Identities=18% Similarity=0.282 Sum_probs=54.6
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+. | .+.|++++..+.. ..++.+.... ....|.|.++..+|+|.|+|.|.|
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~--p--~v~W~k~~~~~~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 14 DLKTKEASEGATATLQCELSKV--A--PVEWKKGPETLRD---GGRYSLKQDG---TRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp CCBCCEEETTSCEEEEEEBSSS--C--CCEEESSSSBCCS---SSSCEEEEET---TEEEEEESSCCTTTCSEEEEEETT
T ss_pred cCCcEEEeCCCcEEEEEEeCCC--C--eeEEEECCEECCC---CCCEEEEecC---CEEEEEECCCCcccCEEEEEEEcC
Confidence 3456788999999999999754 4 7999999887643 2344433333 345799999999999999999977
Q ss_pred CC
Q psy10361 225 SQ 226 (236)
Q Consensus 225 ~~ 226 (236)
..
T Consensus 84 ~~ 85 (108)
T 2dm7_A 84 ER 85 (108)
T ss_dssp EE
T ss_pred CE
Confidence 53
No 317
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.13 E-value=1.3e-09 Score=79.12 Aligned_cols=81 Identities=25% Similarity=0.425 Sum_probs=61.2
Q ss_pred cccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCC-CCCeEEEE
Q psy10361 142 DIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARP-SDNGKYQC 220 (236)
Q Consensus 142 ~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~y~C 220 (236)
++..+....+.+|+++.|.|.+.+.| .+.+.|++++..+.. ...+........ ....|.|.++.. +|+|.|+|
T Consensus 9 ~~~~p~~~~v~~G~~v~l~C~~~g~p--~~~v~W~~~~~~~~~--~~~~~~~~~~~~--~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 9 IIRKPQNQGVRVGGVASFYCAARGDP--PPSIVWRKNGKKVSG--TQSRYTVLEQPG--GISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSS--CCEEEEEETTEECCT--TSTTEEEEEETT--TEEEEEESSCCTTTTCSEEEE
T ss_pred EEcCCCceEEecCCEEEEEEEEccCC--CCeEEEEECCEECCC--CcceeEEEEcCC--CeEEEEEEecCCCCcCceEEE
Confidence 33445677889999999999999884 459999999988752 223333332222 236899999999 99999999
Q ss_pred EeCCCCCc
Q psy10361 221 NPANSQAK 228 (236)
Q Consensus 221 ~a~n~~g~ 228 (236)
.+.|..|.
T Consensus 83 ~~~n~~g~ 90 (212)
T 2yd1_A 83 VAENGVGD 90 (212)
T ss_dssp EEECSSSC
T ss_pred EEEeCCCC
Confidence 99999874
No 318
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.12 E-value=6.4e-10 Score=72.56 Aligned_cols=81 Identities=19% Similarity=0.218 Sum_probs=58.1
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+. | .+.|++++..+.. ..++.+..+. ....|.|.++..+|+|.|+|.|.
T Consensus 24 ~~~~~~~v~~G~~v~l~C~~~~~--p--~v~W~k~~~~l~~---~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~ 93 (113)
T 2edh_A 24 EGLRNEEATEGATAVLRCELSKM--A--PVEWWKGHETLRD---GDRHSLRQDG---ARCELQIRGLVAEDAGEYLCMCG 93 (113)
T ss_dssp ECCCCCEECTTSCEEEEEEESSC--C--CCEEEESSSBCCC---SSSEEEEEET---TEEEEEECSCCSTTCEEEEEEET
T ss_pred ccCCceEEeCCCeEEEEEEECCC--C--cEEEEECCEECCC---CCcEEEEECC---CEEEEEECCCChhhCEEEEEEeC
Confidence 34556788999999999999664 4 7999999987743 2344444333 24579999999999999999993
Q ss_pred CCCCceEEEEEc
Q psy10361 224 NSQAKSVMVNVL 235 (236)
Q Consensus 224 n~~g~~~~~~v~ 235 (236)
+. ..++.|.|.
T Consensus 94 ~~-~~~~~l~V~ 104 (113)
T 2edh_A 94 KE-RTSAMLTVR 104 (113)
T ss_dssp TE-EEEEEEEEC
T ss_pred CC-CEEEEEEEe
Confidence 32 244555553
No 319
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=3.5e-10 Score=72.41 Aligned_cols=79 Identities=25% Similarity=0.423 Sum_probs=58.5
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
....+.+|+++.|.|.+. . |.+.+.|++++..+... .+..+.... ....|.|.++..+|+|.|+|.|.|..
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~--p~~~v~W~k~g~~~~~~---~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~~~~ 89 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-Q--AQTEVTWYKDGKKLSSS---SKVRVEAVG---CTRRLVVQQAGQAEAGEYSCEAGGQQ 89 (102)
T ss_dssp EEEEEETTCCEEECCBCS-C--SSSCCEEEETTEECCCC---SSEEEEEET---TEEEEEETTCCTTTCSCEEEEETTEE
T ss_pred ccEEEeCCCcEEEEEEec-C--CCCceEEEECCEECCCC---CCEEEEEcC---CEEEEEECCCCcccCEEEEEEcCCCc
Confidence 356788999999999997 5 45699999999887432 234433332 23589999999999999999997754
Q ss_pred CceEEEEEc
Q psy10361 227 AKSVMVNVL 235 (236)
Q Consensus 227 g~~~~~~v~ 235 (236)
.++.|.|.
T Consensus 90 -~~~~l~V~ 97 (102)
T 2eo1_A 90 -LSFRLQVA 97 (102)
T ss_dssp -CCEEEEEE
T ss_pred -EEEEEEEe
Confidence 44555553
No 320
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.11 E-value=1.8e-09 Score=78.82 Aligned_cols=177 Identities=16% Similarity=0.249 Sum_probs=94.6
Q ss_pred CeeEeeC---CeEEEEecceEec--CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEecceeEEecceeeEEec
Q psy10361 1 VSFVRHR---DIHLLTTGRYTYT--NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRHRDIHLLTTGRYTYTN 75 (236)
Q Consensus 1 v~w~~~~---~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~ 75 (236)
+.||+++ ...+|........ ...||.-.. .+.+++|+|++++++|++.|.|+-..... +..
T Consensus 33 ~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~--Sgt~ftLtIs~lq~eD~A~YyC~~~~~~~------------~tF 98 (259)
T 4f9l_D 33 LSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSG--SATGFTLTISSLQPEDIATYYCQQGHSYP------------YTF 98 (259)
T ss_dssp EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEEESCCGGGCEEEEEEECSSSS------------CCB
T ss_pred EEEEEECCCCCCEEEEECCCccCCCCCCCEEeec--cCCeEEEEEcccChhhCEEEEEeecCCCC------------CCc
Confidence 4699875 3344443333322 236887655 45789999999999999999997432110 000
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGS 155 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 155 (236)
. .+-.|.|++. |+.. +.. ....... ....-. ..+..+.......+.+|.
T Consensus 99 G-----------~GTkLeikr~---~aa~-~~s--~~~~s~~-a~ssGv-------------~sqvqL~eSG~~lvkPG~ 147 (259)
T 4f9l_D 99 G-----------GGTKLDIKRA---DAGG-GGS--GGGGSGG-GGSGGG-------------GSQVQLQESGAELVKPGA 147 (259)
T ss_dssp C-----------CCCEECBCCC------------------------------------------CCCEEEECCCEEESSS
T ss_pred c-----------CCeEEEEecc---ccCc-ccc--ccccccc-cccCCc-------------cccceEEeECCCEECCCC
Confidence 0 1223444321 2110 000 0000000 000000 111122222334678999
Q ss_pred eEEEEeEEeeCCCCCCeEEEeec--CeEEe--------------eecCCCceEEEeecCcceEEEEEEcccCCCCCeEEE
Q psy10361 156 TINLTCVVRFSPEPPAYIFWNHN--EAIIS--------------YDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQ 219 (236)
Q Consensus 156 ~~~l~C~~~~~p~p~~~v~W~~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~ 219 (236)
.+.|.|.++|.......+.|.+. |+.++ .+.-++++.+..++ ..++..|.+.+++.+|.+.|.
T Consensus 148 Sl~LSC~aSG~tfs~y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~-s~nt~yLqm~sL~~eDTAvYY 226 (259)
T 4f9l_D 148 SVKLSCKASGYTFTRYYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDK-SSRTTYIQLSSLTSEDSAVYY 226 (259)
T ss_dssp CEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEET-TTTEEEEEECSCCGGGCEEEE
T ss_pred cEEEEEeeeCCCcccCcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEc-cccEEEEEECCCChHHCEEEE
Confidence 99999999987543346788762 22211 11234566654443 446678999999999999999
Q ss_pred EEeC
Q psy10361 220 CNPA 223 (236)
Q Consensus 220 C~a~ 223 (236)
|...
T Consensus 227 CAr~ 230 (259)
T 4f9l_D 227 CSRE 230 (259)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9754
No 321
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.7e-10 Score=75.71 Aligned_cols=84 Identities=13% Similarity=0.214 Sum_probs=59.0
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+.| .+.+.|++++..+.... +..+....+ ....|.|.++..+|+|.|+|.+.
T Consensus 18 ~~~~~~~v~~G~~v~l~C~~~g~p--~p~v~W~k~g~~l~~~~---~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~~g 90 (115)
T 2cr6_A 18 EDLEDVDVQEGSSATFRCRISPAN--YEPVHWFLDKTPLHANE---LNEIDAQPG--GYHVLTLRQLALKDSGTIYFEAG 90 (115)
T ss_dssp ECCCEEEEETTSCEECCCEEESTT--CCSCEEEESSCEECCSS---SCCBCCBTT--TBCCBEECSCCTTTCEEEEEEET
T ss_pred ccCccEEEeCCCcEEEEEEEcCCC--CCccEEEECCEECCCCC---cEEEEEcCC--CEEEEEEcCCChhhCEEEEEEEC
Confidence 345678899999999999999884 45899999998875421 222111111 22479999999999999999965
Q ss_pred CCCCceEEEEEc
Q psy10361 224 NSQAKSVMVNVL 235 (236)
Q Consensus 224 n~~g~~~~~~v~ 235 (236)
+.. .++.|.|.
T Consensus 91 ~~~-~~~~L~V~ 101 (115)
T 2cr6_A 91 DQR-ASAALRVT 101 (115)
T ss_dssp TEE-CCEEEEEE
T ss_pred Cee-EEEEEEEE
Confidence 443 34555543
No 322
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.09 E-value=1.6e-09 Score=77.45 Aligned_cols=76 Identities=17% Similarity=0.249 Sum_probs=59.2
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+. |.+.+.|++++..+.. ..+....... ...+|.|.++..+|+|.|+|.+.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 12 KEMKDVTTKLGEAAQLSCQIVGR--PLPDIKWYRFGKELIQ---SRKYKMSSDG---RTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp ECCCCEEEETTSEEEEEEEEEEE--SCCEEEEEETTEEECC---CSSEEEEESS---SEEEEEEECCSGGGCEEEEEEEE
T ss_pred ccCCceEEeCCCcEEEEEEEecC--CCCEEEEEECCEECCC---CccEEEEeCC---CEEEEEEecCCccCCEEEEEEEE
Confidence 33557788999999999999887 4459999999988743 2233333222 34579999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 84 n~~~ 87 (197)
T 3lcy_A 84 NEVG 87 (197)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 9887
No 323
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.09 E-value=3e-09 Score=79.64 Aligned_cols=57 Identities=18% Similarity=0.241 Sum_probs=40.4
Q ss_pred CeeEeeC---CeE-EEEe--cceEecCCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEE
Q psy10361 1 VSFVRHR---DIH-LLTT--GRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSF 57 (236)
Q Consensus 1 v~w~~~~---~~~-~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~ 57 (236)
|.|++.. ... ++.. +........||.+.......+++|.|.+++++|+|.|.|.+.+
T Consensus 35 v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 97 (256)
T 3tf7_C 35 LFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSA 97 (256)
T ss_dssp EEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEEC
T ss_pred EEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEec
Confidence 4798854 222 2221 2233345788988765566789999999999999999999865
No 324
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.07 E-value=6.6e-10 Score=79.33 Aligned_cols=78 Identities=19% Similarity=0.274 Sum_probs=58.9
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+.| .+.+.|++++..+.... ..+......+ ....|.|.++..+|+|.|+|.+.
T Consensus 10 ~~~~~~~v~~G~~v~l~C~~~~~p--~~~v~W~~~~~~~~~~~-~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 10 QPLQSVVVLEGSTATFEAHISGFP--VPEVSWFRDGQVISTST-LPGVQISFSD---GRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp ECCCCEEEETTSCEEEEEEEEEES--CCEEEEEESSSBCCTTT-STTCEEEEET---TEEEEEESSCCGGGCEEEEEEEE
T ss_pred ccCCceEEECCCEEEEEEEEEecC--CCEEEEEECCEEccccc-CCceEEEeCC---CEEEEEECCCCcccCEEEEEEEE
Confidence 345567889999999999999884 45999999998775321 1122322222 23589999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 84 n~~~ 87 (194)
T 2a38_A 84 NGSG 87 (194)
T ss_dssp ETTE
T ss_pred cCCc
Confidence 9987
No 325
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.07 E-value=1.8e-09 Score=67.85 Aligned_cols=87 Identities=18% Similarity=0.300 Sum_probs=58.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe----EEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA----IISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
.....+..|+.+.|.|.+.+-+ |.|.+.|.+.+. .+.. ....+.. -...+......|.+.++...|.|.|+|.
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~-~rPnVtWcK~~~~~c~~L~~-~~q~~~~-w~e~~n~s~fiL~f~~V~~sDsG~YrCs 97 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCV-HRPNVTWCKHNGTIWVPLEV-GPQLYTS-WEENRSVPVFVLHFKPIHLSDNGSYSCS 97 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSS-SCCCEEEEEECSSSEEECCC-BTTEEEE-EECSSSSCEEEEEETTCCGGGCEEEEEE
T ss_pred eccEEEecCCeEEEEeEecCCC-CCCcEEEEecCCeecccccc-ceeeecc-eeccCCceeEEEEEeeEEEcCCccEEEE
Confidence 3456788999999999997632 345999998652 2211 1110111 1122333556899999999999999999
Q ss_pred eCCCCC----ceEEEEEc
Q psy10361 222 PANSQA----KSVMVNVL 235 (236)
Q Consensus 222 a~n~~g----~~~~~~v~ 235 (236)
|.|..| .++++.|.
T Consensus 98 An~~~g~ieSHs~ti~V~ 115 (122)
T 1xau_A 98 TNFNSQVINSHSVTIHVR 115 (122)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred eeCCCCceeeeEEEEEEE
Confidence 999886 55666653
No 326
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.07 E-value=1.6e-09 Score=78.39 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=63.4
Q ss_pred CcceEEeec-CCCCceEEEEcCCCCCCCeeEEEEEEEEeccee------------------------------E------
Q psy10361 22 DQRFRVINN-PTSDDWTLQLKYPQHKDTGIYECQVSFVRHRDI------------------------------H------ 64 (236)
Q Consensus 22 ~~r~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~------------------------------~------ 64 (236)
..|+.+... ....+++|.|.+++.+|+|.|.|.+........ .
T Consensus 64 ~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 143 (218)
T 4frw_A 64 EGRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAE 143 (218)
T ss_dssp TTTEECCSSCCCTTBCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEE
T ss_pred cceEEEecccccCCeEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeecc
Confidence 345554432 234578999999999999999998875321100 0
Q ss_pred EecceeeEEecCCcEEEEc-----C-CCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEE
Q psy10361 65 LLTTGRYTYTNDQRFRVIN-----N-PTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVV 124 (236)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~ 124 (236)
-.+...+.|.+++...... . .......|.|..++.+|.|.|+|.|.|..+.. ..+.+.|.
T Consensus 144 g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 144 GSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred CCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 0122356776654332111 0 01123579999999999999999999976543 44444443
No 327
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.06 E-value=4.6e-09 Score=67.89 Aligned_cols=84 Identities=18% Similarity=0.281 Sum_probs=57.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.| .+.+.|++... .+... ....+...... ....+|.|.+++.+|
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~D 82 (108)
T 1jhl_L 8 PSYLVASPGETITINCRASKSI--SKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGS---GTDFTLTISSLEPED 82 (108)
T ss_dssp CSEEEECTTSCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEES---SSEEEEEECSCCTTC
T ss_pred CCeeEEcCCCCEEEEeEECCCC--CceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEec---CCEEEEEECCCCHHH
Confidence 4457888999999999998874 45899998541 12110 11234443221 134689999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEE
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|.|.|.+.|.. |....|.|
T Consensus 83 sG~Y~C~~~n~~~~~fg~gt~L~V 106 (108)
T 1jhl_L 83 FAMYICQQHNEYPWTFGGGTKLEI 106 (108)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEE
T ss_pred CEEEEEEEccCCccEECCCEEEEE
Confidence 999999999974 35555555
No 328
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.05 E-value=3.5e-09 Score=78.25 Aligned_cols=36 Identities=17% Similarity=0.467 Sum_probs=29.0
Q ss_pred CcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEE
Q psy10361 22 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFV 58 (236)
Q Consensus 22 ~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~ 58 (236)
..|+.+.. ....+++|.|.+++.+|+|.|.|.+.+.
T Consensus 60 ~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (238)
T 2p1y_A 60 PDGYKASR-PSQENFSLILELATPSQTSVYFCASGDL 95 (238)
T ss_dssp CTTCEEEC-CSSSBCEEEESSCCGGGCEEEEEEEEC-
T ss_pred cceEEEEc-cCCceEEEEEecCCcccCeeEEEEEEeC
Confidence 56887765 3446789999999999999999998753
No 329
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.05 E-value=1.3e-08 Score=73.94 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=73.3
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeC
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFS 166 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 166 (236)
....|.|.+++.+|+|.|+|.+.|..+.. ..+.|.|. ..| ..+... .....+..+.|.|.....
T Consensus 74 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~----------~~P-~~p~~~----~~~~~~~~~~l~w~~p~~ 138 (215)
T 3mtr_A 74 SASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQA----------DTP-SSPSID----QVEPYSSTAQVQFDEPEA 138 (215)
T ss_dssp TEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEEC----------CCC-CCCEEE----EEEEETTEEEEEEECCSC
T ss_pred CeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEEC----------CCC-CCCcce----EEEEecceEEEEEecCCc
Confidence 35789999999999999999999988754 55556665 122 111111 112346778888864221
Q ss_pred --CCCCC--eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 167 --PEPPA--YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 167 --p~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..|.. .+.|.+++...-. ........ ......|.|.++...+.|.|+|.|.|..|
T Consensus 139 ~~~~pi~~y~v~~~~~~~~~w~-----~~~~~~~~-~~~~~~l~i~~L~~~~~y~~~~~A~N~~G 197 (215)
T 3mtr_A 139 TGGVPILKYKAEWRAVGEEVWH-----SKWYDAKE-ASMEGIVTIVGLKPETTYAVRLAALNGKG 197 (215)
T ss_dssp CCSSCEEEEEEEEEETTCCCCE-----EEEEEHHH-HHHHTEEEEECCCTTCEEEEEEEEEESSC
T ss_pred cCCCceEEEEEEEEECCCCccc-----cccccccc-ccccccEEECCCCCCCEEEEEEEEEeCCc
Confidence 11322 3778776542110 00000000 00002799999999999999999999998
No 330
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.05 E-value=1.1e-09 Score=80.88 Aligned_cols=76 Identities=21% Similarity=0.394 Sum_probs=59.4
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+. |.+.+.|++++..+................ +|.|.++..+|.|.|+|.+.|
T Consensus 21 ~~~~~~v~~G~~v~L~C~~~~~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~~~~ 93 (241)
T 3grw_A 21 DKKLLAVPAANTVRFRCPAAGN--PTPSISWLKNGREFRGEHRIGGIKLRHQQW-----SLVMESVVPSDRGNYTCVVEN 93 (241)
T ss_dssp SCCEEEEETTSEEEEECCEECS--SCCEEEEEETTEECCGGGSTTCCEEEGGGT-----EEEECSCCGGGCEEEEEEEEE
T ss_pred CCcceEEcCCCeEEEEEEecCC--CCceeEEEECCcccCCCCcccceeeeccce-----EEEEEeCCcccCEEEEEEEee
Confidence 3456888999999999999988 445999999998875433222333333333 799999999999999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..|
T Consensus 94 ~~~ 96 (241)
T 3grw_A 94 KFG 96 (241)
T ss_dssp TTE
T ss_pred cCC
Confidence 887
No 331
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.05 E-value=2e-09 Score=78.23 Aligned_cols=76 Identities=24% Similarity=0.340 Sum_probs=56.8
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEccc-CCCCCeEEEEEeC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKA-RPSDNGKYQCNPA 223 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~y~C~a~ 223 (236)
.+....+.+|+++.|.|.+.+.| .+.+.|++++..+.. .+....... ......|.|.++ ..+|+|.|+|.+.
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~g~p--~~~v~W~k~~~~~~~----~~~~~~~~~-~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 12 TPVDQTGVSGGVASFICQATGDP--RPKIVWNKKGKKVSN----QRFEVIEFD-DGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp CCCCEEEETTSCEEEEEEEEEES--CCEEEEEETTEECCC----TTEEEEEEG-GGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CcceeEEecCCeEEEEEEEeeCC--CCEEEEEECCcCCCC----CceeEEEEc-CCCceEEEEeccCCCCCCeEEEEEEE
Confidence 35567889999999999999884 459999999987743 122211111 012357999999 5999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 85 n~~g 88 (212)
T 2yd6_A 85 NNVG 88 (212)
T ss_dssp ETTE
T ss_pred cCCC
Confidence 9987
No 332
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.05 E-value=1.5e-09 Score=77.35 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=58.6
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+.| .+.+.|++++..+... ..+........ .|.|.++..+|.|.|+|.+.|
T Consensus 13 ~~~~~~~~~G~~v~l~C~~~~~p--~~~i~W~~~~~~~~~~--~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 13 PLETVDALVEEVATFMCAVESYP--QPEISWTRNKILIKLF--DTRYSIRENGQ-----LLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp CCCEEEEETTSCEEEECCEEEES--CCEEEEEETTEECCTT--CTTEEEEGGGT-----EEEESSCCGGGCEEEEEEEEC
T ss_pred CccceeeeCCCcEEEEeeCCCCC--CCeEEEEECCEEcccc--CccEEEcCCcc-----EEEEcCCCcccCeEEEEEEEc
Confidence 34567889999999999999884 4599999999877431 23444433332 799999999999999999999
Q ss_pred CCCc
Q psy10361 225 SQAK 228 (236)
Q Consensus 225 ~~g~ 228 (236)
..|.
T Consensus 84 ~~~~ 87 (192)
T 2iep_A 84 GVGG 87 (192)
T ss_dssp SSSC
T ss_pred CCCc
Confidence 8874
No 333
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.04 E-value=3e-09 Score=75.15 Aligned_cols=76 Identities=17% Similarity=0.381 Sum_probs=57.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+. |.+.+.|++++..+... .+....... ......|.|.++..+|.|.|.|.+.|.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~--p~~~v~W~k~~~~~~~~---~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 82 (182)
T 1rhf_A 9 PVKLTVSQGQPVKLNCSVEGM--EEPDIQWVKDGAVVQNL---DQLYIPVSE-QHWIGFLSLKSVERSDAGRYWCQVEDG 82 (182)
T ss_dssp CEEEEEETTCCEEEEEEEESC--SSCCEEEEETTEECCSS---EEEEEEEET-TEEEEEEEESSCCGGGCEEEEEEESSC
T ss_pred CcceEEeCCCcEEEEEEEeCC--CCCeEEEEECCeecCCC---CceEEEecC-CCceEEEEEeecCcccCeEEEEEEEcC
Confidence 456788999999999999987 44599999999877431 122222222 223468999999999999999999998
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.|
T Consensus 83 ~~ 84 (182)
T 1rhf_A 83 GE 84 (182)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 334
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.04 E-value=1.7e-09 Score=73.82 Aligned_cols=87 Identities=18% Similarity=0.304 Sum_probs=58.3
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-----cCCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-----SQRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
..+..+.+..|+++.|.|.+.+.| .+.+.|++.+...... ....+....... ....+|.|.+++.+|+|.|
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~--~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~--~~~~~L~I~~v~~~DsG~Y 118 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHE--DSSLQWSNPAQQTLYFGEKRALRDNRIQLVTST--PHELSISISNVALADEGEY 118 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCT--TCCEEEECTTCCEEEETTEECSCCTTEEEEEEC--SSEEEEEECSCCGGGCEEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCC--CcEEEEECCCCcEEEECCceecccCCEEEecCC--CCeEEEEECCCChhhCEEE
Confidence 445678899999999999998874 4589999543221110 111233322221 1245899999999999999
Q ss_pred EEEeCCCCC---ceEEEEEc
Q psy10361 219 QCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 219 ~C~a~n~~g---~~~~~~v~ 235 (236)
+|.+.|. | ..+.|.|.
T Consensus 119 ~C~~~n~-~~~~~~~~L~V~ 137 (145)
T 1z9m_A 119 TCSIFTM-PVRTAKSLVTVL 137 (145)
T ss_dssp EEEECSS-SCEEEEEEEEEE
T ss_pred EEEEEcC-CCceEEEEEEEE
Confidence 9999998 6 34445553
No 335
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.04 E-value=7.7e-10 Score=80.55 Aligned_cols=83 Identities=16% Similarity=0.114 Sum_probs=52.9
Q ss_pred CCCceEEEEcCCCCCCCeeEEEEEEEEeccee-----------------------------EE-------ecceeeEEec
Q psy10361 32 TSDDWTLQLKYPQHKDTGIYECQVSFVRHRDI-----------------------------HL-------LTTGRYTYTN 75 (236)
Q Consensus 32 ~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~~~-----------------------------~~-------~~~~~~~~~~ 75 (236)
...+++|+|.+++.+|+|.|.|.+.+..+... .+ -+....+|..
T Consensus 79 ~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~ 158 (225)
T 4fmk_A 79 DLRDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWIS 158 (225)
T ss_dssp SCCBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEEC
T ss_pred ccCcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEE
Confidence 34578999999999999999999875322110 00 0122345544
Q ss_pred CCcEEEE----cCCCCC----cEEEEEcCCCCCCCEEEEEEeecCCC
Q psy10361 76 DQRFRVI----NNPTSD----DWTLQLKYPQHKDTGIYECQVSTTPH 114 (236)
Q Consensus 76 ~~~~~~~----~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~ 114 (236)
++..... .....+ ...|.|..++.+|+|.|+|.|.|..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~ 205 (225)
T 4fmk_A 159 SLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESF 205 (225)
T ss_dssp SSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred CCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCC
Confidence 4322211 011111 24699999999999999999999654
No 336
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.03 E-value=1e-09 Score=78.59 Aligned_cols=82 Identities=22% Similarity=0.316 Sum_probs=59.1
Q ss_pred ccCCCcEEEecCCeEEEEeEEe-eCCCCCCeEEEeecCeEEeeecCCCceEEEeecC--cc--eEEEEEEcccCCCCCeE
Q psy10361 143 IIGGPEVFIENGSTINLTCVVR-FSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKG--ET--TVSYLLIQKARPSDNGK 217 (236)
Q Consensus 143 ~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~L~i~~v~~~d~G~ 217 (236)
+..+....+.+|+++.|.|.+. +.| .+.+.|++++..+..... .+........ .. ....|.|.++..+|+|.
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~~p--~~~v~W~~~g~~l~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 82 (195)
T 2c5d_C 6 VGNPGNITGARGLTGTLRCQLQVQGE--PPEVHWLRDGQILELADS-TQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQ 82 (195)
T ss_dssp EECCCCEEECTTCCEEEEEEEEEESS--CCCCEEEETTEECCSCEE-EEEEEECSSSTTSEEEEEEEEEESSCCSTTCEE
T ss_pred ccChhheEEecCCcEEEecccccCCC--CcEEEEEECCEEcccCCC-CceEEEEccccccceeeccEEEEEeccccCCcE
Confidence 3445678889999999999998 874 458999999988753210 1122221111 00 14689999999999999
Q ss_pred EEEEeCCCCC
Q psy10361 218 YQCNPANSQA 227 (236)
Q Consensus 218 y~C~a~n~~g 227 (236)
|+|.+.|..|
T Consensus 83 Y~C~~~~~~~ 92 (195)
T 2c5d_C 83 YQCLVFLGHQ 92 (195)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEeCCC
Confidence 9999999876
No 337
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.03 E-value=1.7e-10 Score=70.16 Aligned_cols=59 Identities=20% Similarity=0.388 Sum_probs=46.9
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEccc-CCCCCeEEEEEeCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKA-RPSDNGKYQCNPAN 224 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~y~C~a~n 224 (236)
....+..|+++.|.|.+.+. | .+.|++++..+... .++ +|.|.++ ..+|+|.|+|.|.+
T Consensus 7 ~~~v~~~G~~v~L~C~~~g~--P--~i~W~kdg~~l~~~----------~~~-----~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 7 EYKVSISGTSVELTCPLDSD--E--NLKWEKNGQELPQK----------HDK-----HLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCEEEEETTEEEEECSSCCC--S--SCEEEETTEECTTC----------CSS-----CCBCCSCCTTTTCSCEEEECSS
T ss_pred ceeEEEcCCeEEEEEECCCC--C--cEEEEECCEECcCC----------CCC-----EEEECccCccCcCEEEEEEEcc
Confidence 34566789999999999988 4 39999999887421 111 6999996 78999999999976
No 338
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.03 E-value=1.5e-09 Score=81.14 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=29.0
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEE
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSF 57 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~ 57 (236)
...||.... .+.+++|.|.+++.+|+|.|.|.+.+
T Consensus 61 ~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 95 (256)
T 3ux9_B 61 VPDRFSGSK--SGTSASLAITGLQSEDEADYYCQVRD 95 (256)
T ss_dssp CCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCcEEEEc--cCCEEEEEECCCChhhCEEEEEEEEE
Confidence 456887765 34678999999999999999999875
No 339
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.02 E-value=1.6e-09 Score=79.87 Aligned_cols=128 Identities=18% Similarity=0.201 Sum_probs=74.8
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC------C---ceeEEEEEEEEEEeeCCcccccCCCcccccCC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP------H---QAHYIYLTVVVLVINDGKYLLVPEPETDIIGG 146 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~------~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
.+|+.+..........|.|.+++.+|+|.|.|.+.+.. . ......|.|. ... ....+
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~-------------~~~-~~~~~ 126 (229)
T 1hxm_A 61 KDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVE-------------PRS-QPHTK 126 (229)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEE-------------CCS-CCCBC
T ss_pred CCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecCCCcccccchhhcCccEEEEEe-------------ccC-CCCcC
Confidence 46777654333356789999999999999999997652 1 1233567776 100 00112
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEccc-CCCCCeEEEEEeCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKA-RPSDNGKYQCNPANS 225 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~y~C~a~n~ 225 (236)
+.+.+.. ..+.|.|.+.+...++..+.|.++ ..+... . .... ...++ ++.+... ...+.|.|+|.+.+.
T Consensus 127 P~v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~~~~-~-~~~~-~~~dg-----~y~~~~~~~~~~~~~ytC~V~h~ 196 (229)
T 1hxm_A 127 PSVFVMK-NGTNVACLVKEFYPKDIRINLVSS-KKITEF-D-PAIV-ISPSG-----KYNAVKLGKYEDSNSVTCSVQHD 196 (229)
T ss_dssp CEEEEEE-ETTEEEEEEESCBSSCCEEEEECS-SEEEEC-C-CEEE-ECTTS-----SEEEEEEEEETTTTTCEEEEEET
T ss_pred CcEEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CEEecC-c-cceE-ECCCC-----cEEEEECcccCCCCcEEEEEEeC
Confidence 2222222 234899999876323358999999 666432 1 1111 12223 1222222 236789999999998
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.+
T Consensus 197 ~~ 198 (229)
T 1hxm_A 197 NK 198 (229)
T ss_dssp TE
T ss_pred CC
Confidence 64
No 340
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.02 E-value=1.4e-09 Score=85.59 Aligned_cols=125 Identities=17% Similarity=0.229 Sum_probs=73.4
Q ss_pred CcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCC-eEEEEeEEee
Q psy10361 88 DDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGS-TINLTCVVRF 165 (236)
Q Consensus 88 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~ 165 (236)
++.+|.|.+++.+|+|.|.|.+.+..... ..+.|.|. .+ +...+.......+..|+ .+.|.|.+.+
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~-----------~p-P~V~v~p~~~~~~~~G~~~vtL~C~a~G 319 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVY-----------KP-PKVSLMPATLARAAPGEAPPELLCLVSH 319 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEE-----------BC-CEEEEESSSCCCCCTTCCCCCEEEEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeec-----------cC-CeEeeccCcceeecCCCccEEEEEEecC
Confidence 46789999999999999999998875443 45666666 11 11111111111134576 7999999988
Q ss_pred CCCCC--CeEEEe-ecCe---EEeeecC--CCceEEEeecC-cceEEEEEEcccCCCC-CeEEEEEeCCCC
Q psy10361 166 SPEPP--AYIFWN-HNEA---IISYDSQ--RGGVNVITEKG-ETTVSYLLIQKARPSD-NGKYQCNPANSQ 226 (236)
Q Consensus 166 ~p~p~--~~v~W~-~~~~---~~~~~~~--~~~~~~~~~~~-~~~~~~L~i~~v~~~d-~G~y~C~a~n~~ 226 (236)
.+ |. +.+.|. +++. .+..... ..... ...++ ....+.|.+.....++ .+.|+|.+.|..
T Consensus 320 fy-P~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~-~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 320 FY-PSGGLEVEWELRGGPGGRSQKAEGQRWLSALR-HHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EB-SSTTCEEEEEEESSSSCSCEECCSEEEECCCE-ECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred Cc-CCCCcEEEEEecCCCCCceecccccccccccc-cCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 63 33 689995 7652 1111000 00111 11222 2344566666553334 459999999986
No 341
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.02 E-value=1.5e-09 Score=79.56 Aligned_cols=75 Identities=21% Similarity=0.376 Sum_probs=58.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+. |.+.+.|++++..+............... ..|.|.++..+|+|.|+|.+.|.
T Consensus 26 ~~~~~v~~G~~v~L~C~~~~~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~~~n~ 98 (231)
T 3ojm_B 26 KRLHAVPAANTVKFRCPAGGN--PMPTMRWLKNGKEFKQEHRIGGYKVRNQH-----WSLIMESVVPSDKGNYTCVVENE 98 (231)
T ss_dssp CSCEEEETTSCEEEECCEEEE--SCCEEEEEETTEECCGGGSTTCCEEEGGG-----TEEEECSCCGGGCEEEEEEEEET
T ss_pred ceeEEEccCCCEEEEEecccC--CCCeEEEEECCccccccccccceeeecCc-----ceEEEecCCcccCEEEEEEEecc
Confidence 356788999999999999988 44599999999887543322222333333 27999999999999999999999
Q ss_pred CC
Q psy10361 226 QA 227 (236)
Q Consensus 226 ~g 227 (236)
.|
T Consensus 99 ~~ 100 (231)
T 3ojm_B 99 YG 100 (231)
T ss_dssp TE
T ss_pred cC
Confidence 87
No 342
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.01 E-value=1e-10 Score=86.89 Aligned_cols=127 Identities=15% Similarity=0.126 Sum_probs=70.2
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
..|.|.....+|.|.|+|.+.+..... ....+.... . ...++...+..+... ...|+.+.|.|.+.+.+.
T Consensus 89 s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~------~--~~~~P~V~v~~~~~~-~~~g~~~~L~C~~~gf~P 159 (240)
T 4acp_A 89 SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK------G--QPREPQVYTLPPSRD-ELTKNQVSLTCLVKGFYP 159 (240)
T ss_dssp EEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC------S--CCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBS
T ss_pred EEEEEechhccCCCEEEEEEEcCCCCccccccccccC------C--CCCCCEEEEECCChH-HhcCCceEEEEEEeEEeC
Confidence 357777777778999999999865422 211221100 0 000111112222111 123889999999998421
Q ss_pred CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 169 PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 169 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
+...+.|++++..+.... ........+......+.|.+......+.|.|+|.+.+..
T Consensus 160 ~~i~v~W~k~g~~~~~~~-~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 160 SDIAVEWESNGQPENNYK-ATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp SCCEEEEEETTEECSSEE-ECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CCcEEEEEECCEECCCcC-ccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 234899999998763211 011111112222344567777666667899999999986
No 343
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.01 E-value=1.1e-09 Score=78.00 Aligned_cols=70 Identities=23% Similarity=0.369 Sum_probs=55.6
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
...+.+|+++.|.|.+.+.| .+.+.|++++..+.. ..+........ .|.|.++..+|.|.|.|.+.|..|
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p--~~~v~W~~~~~~~~~---~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~~~~~ 82 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSP--EPAISWFRNGKLIEE---NEKYILKGSNT-----ELTVRNIINSDGGPYVCRATNKAG 82 (192)
T ss_dssp EEETTSCCCEEEECEEECSS--CCEEEEEETTEECCC---SSSEEEETTTT-----EEEECSCCGGGCEEEEEEEEETTE
T ss_pred EEEEecCCCEEEEEeeccCC--CCeEEEEECCeEcCC---CccEEEeCCee-----EEEEecCChhcCcEEEEEEEcccc
Confidence 45677899999999999884 459999999988743 23334333332 799999999999999999999987
No 344
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.01 E-value=3.6e-09 Score=75.50 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=76.4
Q ss_pred EEEEcCCCCCCCEEEEEEeecCC-CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCC
Q psy10361 91 TLQLKYPQHKDTGIYECQVSTTP-HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEP 169 (236)
Q Consensus 91 ~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 169 (236)
.+.|.+++ +|.+.|.|.+.... .....+.|+|. ..| ..+.+... ...+.+|+.++|.|.+.+.. |
T Consensus 53 ~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy----------~~P-~~v~i~~~-~~~~~~G~~~tL~C~v~~~~-P 118 (196)
T 3bn3_B 53 ARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTF----------QRP-DRVELMPL-PPWQPVGENFTLSCRVPGAG-P 118 (196)
T ss_dssp EEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEE----------BCC-CCCEECCC-CSSEETTSEEEEEEEETTCB-C
T ss_pred EEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEe----------cCC-CcCEEccC-CccccCCCcEEEEEEeCCcc-C
Confidence 48899999 88888999987653 34577888887 233 33333332 22478999999999998752 4
Q ss_pred CCe--EEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 170 PAY--IFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 170 ~~~--v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
... +.|++++..+......+. ..........+.+.....++...|+|.|.|.++
T Consensus 119 ~~~L~i~wlkg~~~l~~~~~~~~----~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 119 RASLTLTLLRGAQELIRRSFAGE----PPRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp GGGEEEEEEETTEEEEEEECTTS----CTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred CCCcEEEEEeCCEEeeccccccc----cccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 333 899999998854321110 001111334555554444444499999999875
No 345
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.99 E-value=4.9e-10 Score=91.54 Aligned_cols=82 Identities=27% Similarity=0.521 Sum_probs=59.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.|.| .+.+.|++++..+......+++... .++ +|.|.++..+|+|.|+|.|.|.
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P--~p~i~W~~~~~~~~~~~~~~~~~~~-~~~-----~L~i~~v~~~d~G~Y~C~a~N~ 463 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDP--PPAILWLSPRKHLVSAKSNGRLTVF-PDG-----TLEVRYAQVQDNGTYLCIAANA 463 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEES--CCEEEEECTTSCBC-------CEEC-TTS-----CEEESSCCSTTCEEEEEEEEET
T ss_pred cccEEEeCCCeEEEEEeccccC--CCEEEEEECCccccccCCCceEEeC-CCC-----EEEEeeCChHHCEEEEEEEEeC
Confidence 3467889999999999999985 4599999998766432222233322 222 6999999999999999999999
Q ss_pred CC---ceEEEEEc
Q psy10361 226 QA---KSVMVNVL 235 (236)
Q Consensus 226 ~g---~~~~~~v~ 235 (236)
.| ..+.+.|.
T Consensus 464 ~g~~~~~~~l~V~ 476 (477)
T 2id5_A 464 GGNDSMPAHLHVR 476 (477)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEe
Confidence 98 34455554
No 346
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.98 E-value=1.5e-09 Score=77.41 Aligned_cols=72 Identities=22% Similarity=0.382 Sum_probs=54.7
Q ss_pred cCCCcEEEec-CCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 144 IGGPEVFIEN-GSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 144 ~~~~~~~~~~-g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
..+....+.+ |+++.|.|.+.+.|.|.+.+.|++++..+.... ... ....|.|.++..+|+|.|+|.+
T Consensus 7 ~~~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~---~~~--------~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 7 VTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATR---KNA--------SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp EECCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCC---BCC--------SEEEEEESSCCGGGCEEEEEEE
T ss_pred cccceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccc---eEe--------ccEEEEEecCCcccCEEEEEEE
Confidence 3344556666 999999999998855446899999998774311 100 2258999999999999999999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.|. |
T Consensus 76 ~n~-~ 79 (190)
T 2wv3_A 76 HFV-S 79 (190)
T ss_dssp EET-T
T ss_pred EeC-C
Confidence 998 5
No 347
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.97 E-value=1.2e-09 Score=79.32 Aligned_cols=92 Identities=17% Similarity=0.279 Sum_probs=59.1
Q ss_pred CCcceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEec-------ce--eEEe-------------------------
Q psy10361 21 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVRH-------RD--IHLL------------------------- 66 (236)
Q Consensus 21 ~~~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~-------~~--~~~~------------------------- 66 (236)
...|+.+.......+++|.|.+++.+|+|.|.|.+..... .. ..+.
T Consensus 67 ~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~ 146 (214)
T 2zg1_A 67 TQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCS 146 (214)
T ss_dssp TTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEE
T ss_pred ccCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEE
Confidence 3568887764445678999999999999999999875320 00 0010
Q ss_pred --------cceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCC
Q psy10361 67 --------TTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTP 113 (236)
Q Consensus 67 --------~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 113 (236)
+...+.|.+++.... .........|.|..+..+|.|.|+|.|.|..
T Consensus 147 ~~~~~~~~p~p~v~W~~~~~~~~-~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~ 200 (214)
T 2zg1_A 147 LPGSCEAGPPLTFSWTGNALSPL-DPETTRSSELTLTPRPEDHGTNLTCQMKRQG 200 (214)
T ss_dssp CTTCCSCSSCCEEEEESSTTSSS-CSSCCCSSEEEECCCTTCCSCEEEEEEECC-
T ss_pred eccCCCCCCCceEEEeCCCCccC-CCCceeEEEEEEecccHHcCcEEEEEEEeCC
Confidence 011344444332111 0111245689999999999999999999964
No 348
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.95 E-value=6.2e-09 Score=69.97 Aligned_cols=84 Identities=20% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEee-ecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIISY-DSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
.+..+.+.+|+++.|.|.+.+. +.+.|+++. ..+.. .....++...... ...+|.|.+++.+|+|.|.|.
T Consensus 23 ~p~~~~v~~G~~v~L~C~~~~~----~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~---~~~~L~I~~~~~~DsG~Y~C~ 95 (133)
T 3khq_A 23 HPRFAAKKRSSMVKFHCYTNHS----GALTWFRKRGSQQPQELVSEEGRIVQTQNG---SVYTLTIQNIQYEDNGIYFCK 95 (133)
T ss_dssp ECSEEEECTTCCEEEEEEESSS----SCEEEEEECTTSCCEECCCTTTTEEEEEET---TEEEEEECSCCGGGCEEEEEE
T ss_pred cCceEEEeCCCeEEEEEEeCCC----CEEEEEEeCCCCCCEEEEEeCCCEEEEcCC---CEEEEEECCCChHHCEEEEEE
Confidence 3557788999999999999875 389999873 22111 0123344443332 346899999999999999999
Q ss_pred eCCCC-------CceEEEEEc
Q psy10361 222 PANSQ-------AKSVMVNVL 235 (236)
Q Consensus 222 a~n~~-------g~~~~~~v~ 235 (236)
+.|.. |....|.|.
T Consensus 96 a~n~~g~~~~~~g~gt~L~V~ 116 (133)
T 3khq_A 96 QKCDSANHNVTDSCGTELLVL 116 (133)
T ss_dssp ESSCC-------CCCEEEEEC
T ss_pred EEeCCCCcceeECCCEEEEEE
Confidence 99985 455666664
No 349
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.95 E-value=9.7e-08 Score=70.63 Aligned_cols=150 Identities=17% Similarity=0.181 Sum_probs=96.9
Q ss_pred CCCCCCCeeEEEEEEEEecceeEEecceeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCcee-EEE
Q psy10361 42 YPQHKDTGIYECQVSFVRHRDIHLLTTGRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQAH-YIY 120 (236)
Q Consensus 42 ~~~~~D~G~Y~C~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~ 120 (236)
++..+|.-.+.|.+....... ..-.+.|.+++... . .....|.|..+...|+|.|+|.+.+..+... ...
T Consensus 13 ~i~~GdsVTLTatVaGGkP~p----spyTYqWyKDG~~I-s----GaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~ 83 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLP----SNLTYTWTKDDQPH-E----NNTATLTVADATSENAGSYKVTVQDTDTMTSVESE 83 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCC----CCEEEEEEETTEEC-S----CCSSEEEESSCCGGGCEEEEEEEEETTTCCEEECC
T ss_pred cccCCCCEEEEEEecCCCCCC----CCceEEEEECCccc-c----CCcceEEeeeccccCCeEEEEEEEECCCCeeeeee
Confidence 445688888888887643210 01256777776331 1 1345899999999999999999988765442 223
Q ss_pred EEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEE--eeCCCC----CCeEEEeecCeEEeeecCCCceEEE
Q psy10361 121 LTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVV--RFSPEP----PAYIFWNHNEAIISYDSQRGGVNVI 194 (236)
Q Consensus 121 l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~--~~~p~p----~~~v~W~~~~~~~~~~~~~~~~~~~ 194 (236)
+.|. ..+.....+..+....+..|..+.|.+.+ .|...| ...+.|++++..+.. ..
T Consensus 84 VtVT----------~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg--Aq------ 145 (304)
T 3shs_A 84 VFLM----------EEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT--TQ------ 145 (304)
T ss_dssp CEEE----------CBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES--SS------
T ss_pred EEEe----------ccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC--cc------
Confidence 3333 00111112223445556677889999887 432112 358999999987631 11
Q ss_pred eecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 195 TEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 195 ~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.|++......+.|.|.|.+.|..+
T Consensus 146 ---------~lT~sS~TateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 146 ---------DITIQEFTADKNGVYTVKVWGESE 169 (304)
T ss_dssp ---------EEEECSCCGGGCEEEEEEEESSSG
T ss_pred ---------ccceeeEEecCCeEEEEEEEcCCC
Confidence 577778888899999999999976
No 350
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.94 E-value=6.4e-09 Score=77.95 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=26.3
Q ss_pred ceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEE
Q psy10361 24 RFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSF 57 (236)
Q Consensus 24 r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~ 57 (236)
|+.........+++|.|.+++.+|+|.|.|.+.+
T Consensus 67 r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 100 (259)
T 3omz_A 67 GKYDTYGSTRKNLRMILRNLIENDSGVYYCATWD 100 (259)
T ss_dssp TTEEEECC--CCCEEEESSCCGGGCEEEEEEEEC
T ss_pred ceeEeecCCCCeEEEEECCCCcccCEEEEEEEee
Confidence 5555444556788999999999999999999864
No 351
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.94 E-value=1.1e-08 Score=72.63 Aligned_cols=74 Identities=26% Similarity=0.325 Sum_probs=56.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEee-cCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNH-NEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
+....+.+|+++.|.|.+.+. |. .+.|++ ++..+.. ..+....... ....|.|.++..+|+|.|+|.+.|
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~--p~-~v~W~~~~~~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGE--PE-SIDWYNPQGEKIIS---TQRVVVQKEG---VRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEEC--CS-EEEEECTTSCBCCC---CSSEEEEEET---TEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEecCCcEEEEEEeecC--Ce-eEEEEeCCCCccCC---CceEEEECCC---CeEEEEEccCCcccCeEEEEEEEe
Confidence 456788899999999999987 44 899999 6665532 2344443333 235899999999999999999999
Q ss_pred CCCc
Q psy10361 225 SQAK 228 (236)
Q Consensus 225 ~~g~ 228 (236)
..|.
T Consensus 80 ~~g~ 83 (189)
T 2v44_A 80 AKGQ 83 (189)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 9874
No 352
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.93 E-value=1.7e-09 Score=82.45 Aligned_cols=102 Identities=7% Similarity=0.079 Sum_probs=30.2
Q ss_pred eEEecCCcEEEEcCC--CCCcEEEEEcCCCCCCCEEEEEEeecCCC---------ceeEEEEEEEEEEeeCCcccccCCC
Q psy10361 71 YTYTNDQRFRVINNP--TSDDWTLQLKYPQHKDTGIYECQVSTTPH---------QAHYIYLTVVVLVINDGKYLLVPEP 139 (236)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~---------~~~~~~l~v~~~~~~~~~~~~~~~~ 139 (236)
+.|.++++....... ......|.+...+.+|.+.|+|.|.+..+ .+....|.|. +.|..
T Consensus 121 itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~----------~~P~~ 190 (291)
T 1mq8_A 121 VVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTF----------VLPAT 190 (291)
T ss_dssp EEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------------
T ss_pred EEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEE----------ecCCC
Confidence 577766654322111 11234565555556666799999987533 2345667776 33333
Q ss_pred cccccCCCcEEEecCCeEEEEeEEeeCCCC-CCeEEEeecCeEEee
Q psy10361 140 ETDIIGGPEVFIENGSTINLTCVVRFSPEP-PAYIFWNHNEAIISY 184 (236)
Q Consensus 140 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~~~v~W~~~~~~~~~ 184 (236)
.+.+..+ ..+.+|+.+.|.|.+.|.+.+ ...+.|++++..+..
T Consensus 191 ~~~~~~p--~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 191 PPQLVSP--RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp ----------------------------------------------
T ss_pred CceecCC--cCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCc
Confidence 2333322 267789999999999987422 236999999988753
No 353
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.93 E-value=4.9e-09 Score=76.52 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=55.3
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+. |.+.+.|++++..+... .. ..|.|.++..+|+|.|+|.+.
T Consensus 23 ~~p~~~~v~~G~~v~L~C~~~~~--p~~~v~W~~~~~~~~~~----------~~-----~~L~i~~v~~~d~G~Y~C~~~ 85 (218)
T 3k0w_A 23 VNPESKAVLAGQFVKLCCRATGH--PFVQYQWFKMNKEIPNG----------NT-----SELIFNAVHVKDAGFYVCRVN 85 (218)
T ss_dssp ECCCCEEEETTSBEEEECEETTT--TSSEEEEEETTEECTTC----------CS-----SEEEETTCCGGGCEEEEEEEE
T ss_pred ECCCCeEEeCCCcEEEEeeecCC--CCCEEEEEECCEECCCC----------CC-----CEEEEccCChhhCeEeEEEEE
Confidence 34567888999999999999887 45599999999876421 11 279999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 86 n~~~ 89 (218)
T 3k0w_A 86 NNFT 89 (218)
T ss_dssp CTTC
T ss_pred cCCC
Confidence 9987
No 354
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.92 E-value=2.5e-08 Score=64.49 Aligned_cols=84 Identities=15% Similarity=0.325 Sum_probs=57.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+... ....+....... ...+|.|.+++.+|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~~~D 84 (109)
T 2q20_A 10 PSSLSASVGDRVTITCQASQDI--SNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSG---TDFTFTISSLQPED 84 (109)
T ss_dssp CSEEEECTTCCEEEEEEESSCC--TTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCEEEecCCCcEEEEEeeccCC--CCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccC---CEEEEEECCCChhh
Confidence 4567889999999999998764 4589999864 1 12110 112344433211 34579999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEE
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|.|.|.+.+.. |....|.|
T Consensus 85 sG~Y~C~~~~~~~~~fg~gT~L~V 108 (109)
T 2q20_A 85 IATYYCQQYDNLPYTFGQGTKLEI 108 (109)
T ss_dssp CEEEEEEECSSSSCCBCCCEEEEE
T ss_pred CEEEEEEEeeCCcceECCCEEEEE
Confidence 999999998853 45555555
No 355
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.92 E-value=3.8e-09 Score=76.02 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=54.4
Q ss_pred CcEEEecCCeEEEEeEEeeCCC---CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPE---PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~---p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
....+.+|+++.|.|.+.+.|. ..+.+.|++.+..... ..++..+..+.......+|.|.++..+|+|.|.|.+.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~--~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSL--QSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCC--BCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccc--cCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 3578889999999999988742 1158999994333221 1233443332212234589999999999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 88 ~~~~ 91 (202)
T 3bp6_B 88 CGAA 91 (202)
T ss_dssp ETTE
T ss_pred eCCC
Confidence 9987
No 356
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.92 E-value=7e-09 Score=73.78 Aligned_cols=77 Identities=22% Similarity=0.262 Sum_probs=58.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEee-cCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNH-NEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
+....+.+|+++.|.|.+.+.+ |.+.+.|++ ++..+.... .++....... ....|.|.++..+|+|.|.|.+.|
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~-~~~~v~W~~~~g~~~~~~~--~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (191)
T 1epf_A 9 PSQGEISVGESKFFLCQVAGDA-KDKDISWFSPNGEKLSPNQ--QRISVVWNDD--DSSTLTIYNANIDDAGIYKCVVTA 83 (191)
T ss_dssp SSSEEEETTCCEEEEEEECCCS-CCCEEEEECTTSCEECCBS--SSEEEEEEET--TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCcEEcCCCCEEEEEECCCCC-CCceEEEEeCCCccccCCC--CeEEEEECCC--CceEEEEccCCcccCEEEEEEEEc
Confidence 4567788999999999998874 356999999 777775322 2333322211 335899999999999999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..|
T Consensus 84 ~~~ 86 (191)
T 1epf_A 84 EDG 86 (191)
T ss_dssp TTT
T ss_pred CCC
Confidence 985
No 357
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.92 E-value=7.8e-09 Score=86.16 Aligned_cols=82 Identities=22% Similarity=0.297 Sum_probs=63.7
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.|.| .|.+.|++++.++.. + .++.....+ ...+|.|.++..+|+|.|+|.|.|
T Consensus 488 ~~~~~~v~~G~~~~~~~~v~g~P--~P~v~W~k~~~el~~-s--~~~~i~~~~---~~~~L~I~~~~~~D~G~Yt~~A~N 559 (573)
T 3uto_A 488 KPYGTEVGEGQSANFYCRVIASS--PPVVTWHKDDRELKQ-S--VKYMKRYNG---NDYGLTINRVKGDDKGEYTVRAKN 559 (573)
T ss_dssp CCCCEEECTTSCEEEEEEEECSS--CCEEEEEETTEECCS-S--SSEEEEEET---TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCcEEeCCCcEEEEEEEEccC--CCeEEEEECCEEccc-C--CcEEEEEcC---CEEEEEEcCCCcccCcEEEEEEEe
Confidence 34567788999999999999995 459999999998854 2 344444343 335899999999999999999999
Q ss_pred CCC---ceEEEEE
Q psy10361 225 SQA---KSVMVNV 234 (236)
Q Consensus 225 ~~g---~~~~~~v 234 (236)
..| ..+.|.|
T Consensus 560 ~~G~~~~~v~l~V 572 (573)
T 3uto_A 560 SYGTKEEIVFLNV 572 (573)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 999 3344544
No 358
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.92 E-value=1.3e-08 Score=72.14 Aligned_cols=84 Identities=11% Similarity=0.147 Sum_probs=53.8
Q ss_pred cceEEeecCCCCceEEEEcCCCCCCCeeEEEEEEEEe--cce--eEEe------------------------cceeeEEe
Q psy10361 23 QRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSFVR--HRD--IHLL------------------------TTGRYTYT 74 (236)
Q Consensus 23 ~r~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~--~~~--~~~~------------------------~~~~~~~~ 74 (236)
.|+.+. ..+.+|+|.+++.+|+|.|.|++.... ... +.+. +...+.|.
T Consensus 60 ~R~~l~----~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~ 135 (180)
T 2dru_A 60 DRVDLD----KTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLY 135 (180)
T ss_dssp TTEEEC----TTTCCEEECSCCGGGCEEEEEEEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEE
T ss_pred CeEEEe----CCCccEEEcCCCHHHCeEEEEEEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEE
Confidence 577762 246799999999999999999976421 000 0000 12345666
Q ss_pred cCCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce
Q psy10361 75 NDQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA 116 (236)
Q Consensus 75 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 116 (236)
+++..... .....|.+.. .+|+|.|+|.|.|..+..
T Consensus 136 ~~~~~l~~----~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 136 QGKEHLRS----LRQKTMSYQW--TNLRAPFKCKAVNRVSQE 171 (180)
T ss_dssp ETTEEEEE----ESSSEEEEEC--SCCSSCEEEEEEETTEEE
T ss_pred ECCeECcC----CCCCEEEEEE--hhcCccEEEEEecCcCcc
Confidence 66554321 1234566633 789999999999987544
No 359
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.91 E-value=1.9e-09 Score=81.41 Aligned_cols=105 Identities=13% Similarity=0.161 Sum_probs=50.5
Q ss_pred CCCCCCEEEEEEeecCCCce-eEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCCCCCeEEE
Q psy10361 97 PQHKDTGIYECQVSTTPHQA-HYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPEPPAYIFW 175 (236)
Q Consensus 97 ~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W 175 (236)
.++.|.+.|.|.+.+..+.. ....+.|. ..+..+.+.+|+++.|.|.+.+ +.+.+.|
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~-------------------~~p~~v~v~~G~~v~L~C~~~~---~~~~v~W 60 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVI-------------------QTPRYLVKGQGQKAKMRCIPEK---GHPVVFW 60 (270)
T ss_dssp -------------------------CCCE-------------------EECSEEEEETTSCEEEEEECCT---TCCEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeEE-------------------eCCCeEEEcCCCCEEEEEEecC---CCceEEE
Confidence 46789999999998765433 22222222 2234578889999999999854 3459999
Q ss_pred eecC--eE---EeeecCC---------C-ceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 176 NHNE--AI---ISYDSQR---------G-GVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 176 ~~~~--~~---~~~~~~~---------~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
++.. .. +...... . +..+... .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 61 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 61 YQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECP--SNSPCSLEIQSSEAGDSALYLCASSLN 123 (270)
T ss_dssp EEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECC--TTSCEEEEESSCCGGGCEEEEEEEESC
T ss_pred EEECCCCCcEEEEEECCCCceecCCccCCcEEEEeC--CCcEEEEEECCCCHhHCeEEEEEEecC
Confidence 9822 11 1110000 0 2332221 123468999999999999999999863
No 360
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.91 E-value=5e-09 Score=84.71 Aligned_cols=81 Identities=20% Similarity=0.329 Sum_probs=58.2
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeec-CCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDS-QRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
.+....+.+|+++.|.|.+ +. |.+.+.|++++..+.... ...++.. ..++ +|.|.+++.+|+|.|+|.|.
T Consensus 347 ~~~~~~v~~G~~v~L~C~~-~~--p~p~i~W~~~~~~~~~~~~~~~~~~~-~~~~-----~L~I~~v~~~D~G~Y~C~a~ 417 (440)
T 3zyj_A 347 PPADLNVTEGMAAELKCRA-ST--SLTSVSWITPNGTVMTHGAYKVRIAV-LSDG-----TLNFTNVTVQDTGMYTCMVS 417 (440)
T ss_dssp CCCCEEECTTSCCEECCEE-SS--TTSEEEEECTTSCEEESSSCCSSEEE-CTTC-----CEEESSCCSTTCEEEEEEEE
T ss_pred cccceeeccCceEEEEeec-CC--CCCceEEEeCCCceeeccCCCceEEE-ccCC-----eEEEccCChhhCEEEEEEEE
Confidence 3557788999999999999 45 456999999554443222 2223333 2233 69999999999999999999
Q ss_pred CCCC---ceEEEEE
Q psy10361 224 NSQA---KSVMVNV 234 (236)
Q Consensus 224 n~~g---~~~~~~v 234 (236)
|..| .++.+.|
T Consensus 418 N~~G~~~~~~~~~v 431 (440)
T 3zyj_A 418 NSVGNTTASATLNV 431 (440)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEE
Confidence 9999 3445544
No 361
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.91 E-value=3.7e-09 Score=76.87 Aligned_cols=80 Identities=20% Similarity=0.347 Sum_probs=57.4
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeC
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPA 223 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~ 223 (236)
..+....+.+|+++.|.|.+.+.| .+.+.|++++..+..... ........++ .....|.|.++..+|+|.|+|.+.
T Consensus 14 ~~p~~~~v~~G~~v~L~C~~~g~p--~~~v~W~~~g~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y~C~~~ 89 (217)
T 2vr9_A 14 EHPTDLVVKKNEPATLNCKVEGKP--EPTIEWFKDGEPVSTNEK-KSHRVQFKDG-ALFFYRTMQGKKEQDGGEYWCVAK 89 (217)
T ss_dssp ECCCCEEECTTSCEEECCEEECSS--CCEEEEEETTEECCCSSS-SSSEEECTTS-CEEESSCCBSSSCBCCEEEEEEEE
T ss_pred cCCCceEEeCCCcEEEEEEcCCCC--CCeEEEEECCcCccCCCc-cceeEEecCC-ceEEEEEeccCCcccCceEEEEEe
Confidence 345577889999999999999874 459999999988754221 1222222222 122334688899999999999999
Q ss_pred CCCC
Q psy10361 224 NSQA 227 (236)
Q Consensus 224 n~~g 227 (236)
|..|
T Consensus 90 n~~g 93 (217)
T 2vr9_A 90 NRVG 93 (217)
T ss_dssp ETTE
T ss_pred cCCC
Confidence 9887
No 362
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.90 E-value=9.9e-09 Score=66.89 Aligned_cols=78 Identities=19% Similarity=0.347 Sum_probs=53.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeee----cCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYD----SQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~----~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+..+.+.+|+++.|.|.+.+. + +.+.|++.. .. +... ...++.....+.......+|.|.+++.+|+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~--~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG 84 (113)
T 1h5b_A 8 PSALSLHEGTDSALRCNFTTT--M-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSG 84 (113)
T ss_dssp CSEEEEETTCCEEEEEEESSC--C-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCE
T ss_pred CCEEEEecCCcEEEEEEECCC--C-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCE
Confidence 456788999999999999765 3 489999854 11 1110 0123344332221334568999999999999
Q ss_pred EEEEEeCCCC
Q psy10361 217 KYQCNPANSQ 226 (236)
Q Consensus 217 ~y~C~a~n~~ 226 (236)
.|.|.+.|..
T Consensus 85 ~Y~C~~~n~~ 94 (113)
T 1h5b_A 85 TYFCAAEASS 94 (113)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEecCC
Confidence 9999999875
No 363
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.90 E-value=2.7e-08 Score=67.26 Aligned_cols=89 Identities=21% Similarity=0.295 Sum_probs=58.1
Q ss_pred CcEEEecCCeEEEEeEEeeCCC-CCCeEEEeecCe--EEe-ee-----------cCCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPE-PPAYIFWNHNEA--IIS-YD-----------SQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~-p~~~v~W~~~~~--~~~-~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
..+.+..|+++.|.|.+...+. ....+.|++.+. .+. .. ...++..+..+.......+|.|.+++
T Consensus 14 ~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 93 (139)
T 1pko_A 14 HPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVR 93 (139)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCC
Confidence 3578899999999999976531 235899999764 121 10 01234444332111234689999999
Q ss_pred CCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 212 PSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
.+|+|.|.|.+.|..| ..+.|.|.
T Consensus 94 ~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 94 FSDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 9999999999999886 34455553
No 364
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.90 E-value=1.4e-08 Score=66.12 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=52.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEe-eecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIIS-YDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+.+.+|+++.|.|.+.+.+.+.+.+.|++.. .... .....++.....+. .....+|.|.+++.+|+|.|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~~~~~DsG~Y~C~~ 85 (113)
T 1sq2_N 7 PRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNS-GSKSFSLRINDLTVEDGGTYRCGL 85 (113)
T ss_dssp CSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEET-TTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeC-CCCEEEEEECCCChhhCEEEEEEE
Confidence 4457888999999999998764234589999853 2111 00112344432221 224568999999999999999999
Q ss_pred CC
Q psy10361 223 AN 224 (236)
Q Consensus 223 ~n 224 (236)
.+
T Consensus 86 ~~ 87 (113)
T 1sq2_N 86 GV 87 (113)
T ss_dssp CB
T ss_pred Ee
Confidence 87
No 365
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.90 E-value=2.3e-09 Score=71.10 Aligned_cols=91 Identities=19% Similarity=0.313 Sum_probs=55.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCC-CCeEEEeecCe-----EEeeec----------CCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEP-PAYIFWNHNEA-----IISYDS----------QRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p-~~~v~W~~~~~-----~~~~~~----------~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
++.+.+..|+++.|.|...+.+.. ...+.|++... .+.... ..+++.+..........+|.|.+
T Consensus 7 p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 86 (123)
T 4gjt_B 7 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 86 (123)
T ss_dssp CSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEES
T ss_pred CCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECC
Confidence 456778899999999999765322 23588998542 111000 01233322222222335799999
Q ss_pred cCCCCCeEEEEEeCC-CCC---ceEEEEEcC
Q psy10361 210 ARPSDNGKYQCNPAN-SQA---KSVMVNVLN 236 (236)
Q Consensus 210 v~~~d~G~y~C~a~n-~~g---~~~~~~v~~ 236 (236)
++.+|+|.|.|.+.+ +.| ..+.|.|++
T Consensus 87 v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE 117 (123)
T 4gjt_B 87 AVQADEGEYECRVSTFPAGSFQARLRLRVLE 117 (123)
T ss_dssp CCSSSCSEEEEEEEESSSCEEEEEEEEEC--
T ss_pred CChHHCEEEEEEEEECCCCeEEeEEEEEEEE
Confidence 999999999998765 444 456777763
No 366
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.90 E-value=2.7e-08 Score=65.43 Aligned_cols=85 Identities=13% Similarity=0.219 Sum_probs=57.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. ..+... ....+....... ...+|.|.+++.+|
T Consensus 10 p~~v~v~~G~~vtL~C~~~~~~--~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~~~D 84 (119)
T 2e27_L 10 PSSLSASLGGKVTITCKANQDI--KKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSG---RDYSFSISNLEPED 84 (119)
T ss_dssp CSEEEEETTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEECSCCGGG
T ss_pred CCeEEEeCCCCEEEEEEeCCCC--CceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccC---CEEEEEECCCChHH
Confidence 4567889999999999998764 4589999853 112110 012344432221 34589999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEEc
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
+|.|.|.+.|.. |....|.|.
T Consensus 85 sG~Y~C~~~~~~~~~fg~GT~l~v~ 109 (119)
T 2e27_L 85 AATYYCLQYDNFTWTFGGGTKLEIK 109 (119)
T ss_dssp CEEEEEEECGGGCCEECCCEEEEEE
T ss_pred CEEEEEEEccCCceEECCCEEEEEe
Confidence 999999998852 455555543
No 367
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.89 E-value=5.1e-09 Score=69.25 Aligned_cols=89 Identities=25% Similarity=0.381 Sum_probs=58.1
Q ss_pred CcEEEecCCeEEEEeEEeeCCCC--CCeEEEeecC-------eEEeee-----------cCCCceEEEeecCcceEEEEE
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEP--PAYIFWNHNE-------AIISYD-----------SQRGGVNVITEKGETTVSYLL 206 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p--~~~v~W~~~~-------~~~~~~-----------~~~~~~~~~~~~~~~~~~~L~ 206 (236)
..+.+..|+++.|.|.+.+.+.+ ...+.|++.+ ..+... ...++..+..........+|.
T Consensus 13 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~ 92 (126)
T 1eaj_A 13 EMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASIN 92 (126)
T ss_dssp EEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEE
T ss_pred ceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEE
Confidence 45778899999999999876432 1469999864 222110 112333332220111224799
Q ss_pred EcccCCCCCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 207 IQKARPSDNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 207 i~~v~~~d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
|.+++.+|+|.|.|.+.|..| ..+.|.|+
T Consensus 93 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 124 (126)
T 1eaj_A 93 VTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 124 (126)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ECcCChHHCeEEEEEEEcCCccCCcEEEEEEE
Confidence 999999999999999999876 34556654
No 368
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.89 E-value=6.3e-09 Score=73.80 Aligned_cols=74 Identities=18% Similarity=0.281 Sum_probs=52.6
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
.+....+.+|+++.|.|.+.+. |.+.+.|++++..+... ...+.... .++ .|.|.++..+|.|.|+|.+.|
T Consensus 8 ~~~~~~v~~G~~v~l~C~~~~~--p~~~v~W~~~~~~~~~~-~~~~~~~~-~~~-----~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 8 VVSPQEFKQGEDAEVVCRVSSS--PAPAVSWLYHNEEVTTI-SDNRFAML-ANN-----NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCSSEEEETTSCEEECCEEECS--SCCEEEEEC-----CBC-CCTTEEEC-TTS-----CEEETTCCGGGCEEEEEEEEE
T ss_pred cCCCEEEeCCCcEEEEEEEcCC--CCCEEEEEECCccceec-cCCeEEEe-cCC-----CEEEeeCCHhHCcEEEEEEEE
Confidence 3456788999999999999987 44599999998776532 22233322 222 699999999999999999998
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..+
T Consensus 79 ~~~ 81 (189)
T 2v5t_A 79 EAR 81 (189)
T ss_dssp TTT
T ss_pred cCC
Confidence 875
No 369
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.89 E-value=1e-08 Score=74.74 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=63.5
Q ss_pred CCcceEEeec-CCCCceEEEEcCCCCCCCeeEEEEEEEEecc-----------------------------eeEE-----
Q psy10361 21 NDQRFRVINN-PTSDDWTLQLKYPQHKDTGIYECQVSFVRHR-----------------------------DIHL----- 65 (236)
Q Consensus 21 ~~~r~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~~~-----------------------------~~~~----- 65 (236)
...|+.+... ...++.+|.|.+++.+|+|.|.|.+.+.... ...+
T Consensus 56 ~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~ 135 (222)
T 4i0k_A 56 YSNRTALFPDLLVQGNASLRLQRVRVTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSY 135 (222)
T ss_dssp SCSCEECCTTTGGGTBCCEEECSCCGGGCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEE
T ss_pred eeCcEEEecccccCCeEEEEECCcccccCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecc
Confidence 3556665431 1224789999999999999999998852100 0000
Q ss_pred --ecceeeEEec-CCcEE-------EEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCCce-eEEEEEEE
Q psy10361 66 --LTTGRYTYTN-DQRFR-------VINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPHQA-HYIYLTVV 124 (236)
Q Consensus 66 --~~~~~~~~~~-~~~~~-------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~l~v~ 124 (236)
.+...+.|.. ++... ...........|.|.+++.+|.|.|+|.+.|..+.. ..+.|.|.
T Consensus 136 ~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 136 QGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp EEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred cccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence 0123456655 22111 111111112347899999999999999999987654 66666666
No 370
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.89 E-value=3.4e-08 Score=84.88 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=84.3
Q ss_pred eeeEEecCCcEEEEcCCCCCcEEEEEcCCCCCC-CEEEEEEeecCCCceeEEEEEEEEEEeeCCcccccCCCcccccCCC
Q psy10361 69 GRYTYTNDQRFRVINNPTSDDWTLQLKYPQHKD-TGIYECQVSTTPHQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGP 147 (236)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d-~G~Y~C~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (236)
..+.|.+++.... ......+.|..+...+ ++.|.|.+.+..+.-....+.+.. . ..+ ..+.+..+.
T Consensus 106 p~i~W~k~g~~~~----~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~-----~---~~~-~~p~~~~~~ 172 (731)
T 2v5y_A 106 GNPIWNISGDPTR----TWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLG-----H---PCT-RTPHFLRIQ 172 (731)
T ss_dssp CSEEEEECCCCCS----SCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEES-----S---CCS-SSCEECCCC
T ss_pred cceeEEEeCCcCC----ceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeee-----c---ccc-ccccccccc
Confidence 3566766553221 1123356666653344 488999877666543222223320 0 011 122233455
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEE-Ee--ecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIF-WN--HNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
...+..|+++.|.|.+.|.|.| .+. |+ +++..+.... .. .-.......+|.|.++...|.|.|+|.|.|
T Consensus 173 ~~~v~~G~~v~l~C~~~g~P~p--~i~~W~~~~~g~~l~~~~----~~--~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n 244 (731)
T 2v5y_A 173 NVEVNAGQFATFQCSAIGRTVA--GDRLWLQGIDVRDAPLKE----IK--VTSSRRFIASFNVVNTTKRDAGKYRCMIRT 244 (731)
T ss_dssp CEEEETTSCEEEEEEEESCCCT--TCEEEEEESSSCCEEEEE----EE--ECCSSEEEEEEEECSCCTTTCEEEEEEEEE
T ss_pred ceEEeCCCcEEEEEEeCCCCCC--ceeEEEecCCCccccccc----eE--EeccccceEEEEEcccccccCeEEEEEEEC
Confidence 7889999999999999999654 666 88 6776654321 00 001111235899999999999999999999
Q ss_pred CCCc
Q psy10361 225 SQAK 228 (236)
Q Consensus 225 ~~g~ 228 (236)
..|.
T Consensus 245 ~~G~ 248 (731)
T 2v5y_A 245 EGGV 248 (731)
T ss_dssp TTEE
T ss_pred CCCC
Confidence 9984
No 371
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.89 E-value=4.3e-08 Score=64.58 Aligned_cols=85 Identities=18% Similarity=0.292 Sum_probs=57.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+... ...++....... ...+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~~~D 82 (120)
T 1mqk_L 8 PVSLSASVGETVTITCRASENI--YSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSG---TQFSLKINSLLPED 82 (120)
T ss_dssp CSEEEECTTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCeEEEcCCCcEEEEEEeCCCC--CceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccC---CEEEEEECCCCHHH
Confidence 4467888999999999998764 4589999853 1 12110 012344433211 34579999999999
Q ss_pred CeEEEEEeCCCC-----CceEEEEEc
Q psy10361 215 NGKYQCNPANSQ-----AKSVMVNVL 235 (236)
Q Consensus 215 ~G~y~C~a~n~~-----g~~~~~~v~ 235 (236)
+|.|.|.+.|.. |....|.|.
T Consensus 83 sG~Y~C~~~~~~~~~~fg~gt~L~V~ 108 (120)
T 1mqk_L 83 FGSYYCQHHYGTPPLTFGGGTKLEIK 108 (120)
T ss_dssp CEEEEEEECSSSSSCCBCCCEEEEEC
T ss_pred CEEEEEEEEeCCCceEECCCeEEEEe
Confidence 999999998853 455555553
No 372
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.89 E-value=9.2e-09 Score=66.84 Aligned_cols=78 Identities=19% Similarity=0.311 Sum_probs=52.6
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEe-eecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIIS-YDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+.+.+|+++.|.|.+.+.+.+.+.+.|++.. .... .....++....... .....+|.|.+++.+|+|.|.|.+
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~ 85 (111)
T 2ywz_A 7 PRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDK-GSKSFSLRISDLRVEDSGTYKCQA 85 (111)
T ss_dssp CSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEET-TTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeC-CCCEEEEEECCCChhcCEEEEEEE
Confidence 4457888999999999998753244589999852 2110 00112344332221 123468999999999999999999
Q ss_pred CC
Q psy10361 223 AN 224 (236)
Q Consensus 223 ~n 224 (236)
.|
T Consensus 86 ~~ 87 (111)
T 2ywz_A 86 DY 87 (111)
T ss_dssp EE
T ss_pred Ec
Confidence 87
No 373
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.88 E-value=9.2e-07 Score=64.34 Aligned_cols=145 Identities=17% Similarity=0.178 Sum_probs=85.4
Q ss_pred CCcEEEEcCCCCCcEEEEEcCCCCCCCEEEEEEeecCCC-ceeEEEEEEEEEEeeCCcccc--cC------CCcccc-cC
Q psy10361 76 DQRFRVINNPTSDDWTLQLKYPQHKDTGIYECQVSTTPH-QAHYIYLTVVVLVINDGKYLL--VP------EPETDI-IG 145 (236)
Q Consensus 76 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~l~v~~~~~~~~~~~~--~~------~~~~~~-~~ 145 (236)
.+|+.+....+.....|.|.+++.+|++.|.|....... .-+...++|.-. ....|... .+ .....+ ..
T Consensus 65 kgR~TiSrD~s~nt~yLqm~sL~~eDTAvYYCAr~~~~d~WGqGT~VTVSSa-st~~ps~~~l~~~~sgGSgsdivltQs 143 (254)
T 4f9p_D 65 KDRTTLTADQSSSTAYMQLSSLTSDDSAVYFCARSDYGAYWGQGTLVTVSAA-GGGGSGGGGSGGGGSGGGGSDIVLTQS 143 (254)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEECEESSSCCEECCCEEEEECC--------------------CCSCCEEEE
T ss_pred CCCEEEeeccCCCcCeeEEccCCCCCCEEEEEEecCCCCCcCCCEEEEEeCC-CCcCCCCCCCccccccccccccccccC
Confidence 468888777777788999999999999999997643321 123344454300 00000000 00 001111 22
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+.++|.|.++.. -...+.|++.. + .+... .-..|..... .....+|+|..++.+|
T Consensus 144 P~slsvs~G~~vtlsC~~S~~--~~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~---sgt~ftLtIs~lq~eD 218 (254)
T 4f9p_D 144 PVTLSVTPGDSVSLSCRASQS--ISNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSG---SGTEFTLSINSVETED 218 (254)
T ss_dssp CSEEEECTTCEEEEEEEESSC--CTTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEEC---CTTEEEEEEESCCTTC
T ss_pred CceeEEcCCCcEeeEEEccCc--ccCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeee---eCCEEEEEECCCCHHH
Confidence 456778999999999998654 22368898632 1 12110 1112333221 1244679999999999
Q ss_pred CeEEEEEeCCCC
Q psy10361 215 NGKYQCNPANSQ 226 (236)
Q Consensus 215 ~G~y~C~a~n~~ 226 (236)
.+.|.|...+..
T Consensus 219 ~A~YYC~q~~~~ 230 (254)
T 4f9p_D 219 FGIYFCQQSNSW 230 (254)
T ss_dssp CEEEEEEECSSS
T ss_pred CEEEEEeecCCC
Confidence 999999866654
No 374
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.87 E-value=2.6e-08 Score=64.32 Aligned_cols=84 Identities=12% Similarity=0.295 Sum_probs=56.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. ..+... ...++..... .....+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D 82 (108)
T 1qfw_M 8 PKSMSMSVGERVTLSCKASETV--DSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSG---SATDFTLTISSVQAED 82 (108)
T ss_dssp CSCEECCTTCCEEEEEEESSCC--CSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCB---CSSEEEEEESSCCTTC
T ss_pred CCeEEEcCCCCEEEEeeeCCCC--CcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEc---CCCEEEEEECCCChhh
Confidence 4456788999999999998764 4589999854 112110 0112333221 1234689999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEE
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|.|.|.+.+.. |....|.|
T Consensus 83 sG~Y~C~~~~~~~~~fg~gT~l~V 106 (108)
T 1qfw_M 83 FADYHCGQTYNHPYTFGGGTKLEI 106 (108)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEC
T ss_pred CEEEEEEEccCCceEECCCEEEEE
Confidence 999999999863 45555554
No 375
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.87 E-value=9.9e-09 Score=72.19 Aligned_cols=72 Identities=29% Similarity=0.475 Sum_probs=55.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.|.| ..+.|++++..+.. .. ..|.|.++..+|+|.|+|.+.|.
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~-~~~~W~~~~~~~~~-----------~~-----~~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 14 PQWYSVLEKDSVTLKCQGAYSPED-NSTQWFHNESLISS-----------QA-----SSYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp SCCSEEETTCCEEEEEECCCBTTB-CCCEEEETTEEEES-----------SC-----SEEEESSCCGGGCEEEEEECSSS
T ss_pred CCceeeeCCCcEEEEeeCCCCCCC-cceEEEECCEEccC-----------Cc-----eEEEEeCCCcccCEEEEEEeeCC
Confidence 444578899999999999887533 24889999987742 11 27999999999999999999997
Q ss_pred CC-ceEEEEE
Q psy10361 226 QA-KSVMVNV 234 (236)
Q Consensus 226 ~g-~~~~~~v 234 (236)
.+ ..+.+.|
T Consensus 77 ~~s~~~~l~V 86 (175)
T 1fnl_A 77 TLSDPVQLEV 86 (175)
T ss_dssp CCCCCEEEEE
T ss_pred cccccEEEEE
Confidence 65 4445544
No 376
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.87 E-value=3.7e-08 Score=63.45 Aligned_cols=84 Identities=11% Similarity=0.226 Sum_probs=56.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. . .+... ...++....... ...+|.|.+++.+|
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 82 (107)
T 1i8k_A 8 PASLSVATGEKVTIRCMTSTDI--DDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTG---TDFVFTIENTLSED 82 (107)
T ss_dssp CSEEECCTTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEEEECCCC--CCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccC---CEEEEEECCCCHHH
Confidence 4456788999999999998764 4589999853 1 12110 012344433221 34579999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEE
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|.|.|.+.+.. |....|.|
T Consensus 83 sG~Y~C~~~~~~~~~fg~gt~l~V 106 (107)
T 1i8k_A 83 VGDYYCLQSFNVPLTFGCGTKLEI 106 (107)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEC
T ss_pred CEEEEEEEeeCCCcEECCCeEEEe
Confidence 999999998863 34444444
No 377
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.87 E-value=1.2e-08 Score=65.88 Aligned_cols=78 Identities=19% Similarity=0.317 Sum_probs=52.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEEe-eecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AIIS-YDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+.+.+|+++.|.|.+.+.+.+.+.+.|++.. .... .....++....... .....+|.|.+++.+|+|.|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~~~~~DsG~Y~C~~ 85 (108)
T 2coq_A 7 PRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDE-GSNSASLTIRDLRVEDSGTYKCKA 85 (108)
T ss_dssp CSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEET-TTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcC-CCCEEEEEECCCCcccCEEEEEEE
Confidence 4457888999999999997653223589999863 2110 00112344332221 123568999999999999999999
Q ss_pred CC
Q psy10361 223 AN 224 (236)
Q Consensus 223 ~n 224 (236)
.|
T Consensus 86 ~~ 87 (108)
T 2coq_A 86 YR 87 (108)
T ss_dssp EE
T ss_pred Ee
Confidence 87
No 378
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.86 E-value=1e-08 Score=74.12 Aligned_cols=72 Identities=29% Similarity=0.476 Sum_probs=55.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.|.| ..+.|++++..+.... ..|.|.++..+|+|.|+|.+.|.
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~-~~v~W~k~g~~l~~~~----------------~~L~i~~v~~~D~G~Y~C~a~n~ 76 (204)
T 3sgj_C 14 PQWYRVLEKDSVTLKCQGAYSPED-QSTQWFHNESLISSQA----------------SSYFIDAATVDDSGEYRCQTQLS 76 (204)
T ss_dssp SCCSEEETTCCEEEEEECCSSSSC-CCEEEEETTEEESCCS----------------SEEEESSCCGGGCEEEEEEETTS
T ss_pred CCCeEEECCCCEEEEEcCCCCCCC-cEEEEEECCEEcccCc----------------cEEEEecccccCCEEEEEEeCCC
Confidence 334678899999999999987532 3499999998774311 27999999999999999999986
Q ss_pred CC-ceEEEEE
Q psy10361 226 QA-KSVMVNV 234 (236)
Q Consensus 226 ~g-~~~~~~v 234 (236)
.. ..+.|.|
T Consensus 77 ~~s~~~~l~V 86 (204)
T 3sgj_C 77 TLSDPVQLEV 86 (204)
T ss_dssp BCCCCEEEEE
T ss_pred cccccEEEEE
Confidence 54 4455554
No 379
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.86 E-value=4.5e-09 Score=76.00 Aligned_cols=82 Identities=16% Similarity=0.300 Sum_probs=56.5
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCC-CceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQR-GGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
..+....+.+|+++.|.|.+.+.| .+.+.|++++..+...... ........++......|.|.++..+|.|.|+|.+
T Consensus 14 ~~p~~~~v~~G~~v~l~C~~~~~p--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 91 (212)
T 2v9r_A 14 EHPSDLIVSKGEPATLNCKAEGRP--TPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVA 91 (212)
T ss_dssp ECCCCEEECTTCCEEECCEEEEES--CCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEE
T ss_pred cCCCceEEeCCCcEEEEEEcCCCC--CCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEE
Confidence 345567889999999999999884 4599999999887542211 1112222333222223455677899999999999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.|..|
T Consensus 92 ~n~~g 96 (212)
T 2v9r_A 92 RNYLG 96 (212)
T ss_dssp EETTE
T ss_pred ECCCC
Confidence 99886
No 380
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.86 E-value=3.4e-09 Score=68.56 Aligned_cols=64 Identities=19% Similarity=0.326 Sum_probs=45.9
Q ss_pred EEecCCeEEEEeEEeeCCCC---CCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEP---PAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
.+.+|++++|.|.+...+.+ ...+.|++++..+... ... ..|.|.+++.+|+|.|.|.+.|..
T Consensus 18 ~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~~---------~~~-----~~l~i~~v~~~dsG~Y~C~~~~~~ 83 (108)
T 4hwn_A 18 EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQSR---------GLS-----SEFQIPTASEDHSGSYWCEAATED 83 (108)
T ss_dssp SCBTTCCEEEEEEC---------CCEEEEEETTEEEEEE---------ESC-----CEEEESSCCGGGCEEEEEEEECTT
T ss_pred cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccCC---------Ccc-----cEEEeCccCcccCeEEEEEEEeCC
Confidence 46789999999999765321 1149999999876421 111 279999999999999999999876
Q ss_pred C
Q psy10361 227 A 227 (236)
Q Consensus 227 g 227 (236)
+
T Consensus 84 ~ 84 (108)
T 4hwn_A 84 N 84 (108)
T ss_dssp S
T ss_pred C
Confidence 4
No 381
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.86 E-value=4e-09 Score=75.67 Aligned_cols=69 Identities=13% Similarity=0.244 Sum_probs=51.1
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..+.+|+++.|.|.+.+. |. .+.|++++..+..... ..........|.|.++..+|+|.|+|.|.|..|
T Consensus 14 ~~v~~G~~v~L~C~~~~~--~~-~~~W~k~g~~~~~~~~-------~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 2d3v_A 14 SVISRGNSVTIRCQGTLE--AQ-EYRLVKEGSPEPWDTQ-------NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAG 82 (196)
T ss_dssp SEEETTCCEEEEEECCTT--CC-EEEEEETTCSSCSEEE-------CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CcccCCCeEEEEEeCCCC--Cc-EEEEEECCCCCCcccc-------cccCCccccEEEeccCChhHCeEEEEEEeCCCC
Confidence 378899999999999875 43 9999999876532110 000111335899999999999999999998865
No 382
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.85 E-value=4.5e-09 Score=69.84 Aligned_cols=80 Identities=18% Similarity=0.290 Sum_probs=51.8
Q ss_pred cEEEecCCeEEEEeEEeeCCCC-CCeEEEeecCeE--Ee-e-----------ecCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEP-PAYIFWNHNEAI--IS-Y-----------DSQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p-~~~v~W~~~~~~--~~-~-----------~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
......|+++.|.|.....+.+ ...+.|++.+.. +. . .....+..+..+.......+|.|.+++.
T Consensus 14 ~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~ 93 (125)
T 4gos_A 14 ASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQL 93 (125)
T ss_dssp CEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCG
T ss_pred eEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCCh
Confidence 4567789999999998643211 236899986521 10 0 0012233333222122235799999999
Q ss_pred CCCeEEEEEeCCCCC
Q psy10361 213 SDNGKYQCNPANSQA 227 (236)
Q Consensus 213 ~d~G~y~C~a~n~~g 227 (236)
+|+|.|.|.+.|..|
T Consensus 94 ~D~G~Y~C~v~~~~g 108 (125)
T 4gos_A 94 TDAGTYKCYIITSKG 108 (125)
T ss_dssp GGCEEEEEEEEETTE
T ss_pred HHCEEEEEEEEeCCC
Confidence 999999999999987
No 383
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.85 E-value=1.1e-08 Score=66.44 Aligned_cols=78 Identities=19% Similarity=0.179 Sum_probs=53.1
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEE-----e---------eec--CCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAII-----S---------YDS--QRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~-----~---------~~~--~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
.+.+|+++.|.|.. .|.+...+.|+++.... . ..+ ..+|..+. .++ +|.|.+++.+
T Consensus 11 ~~~~G~~v~L~~~~--~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~-~ng-----SL~I~nvt~~ 82 (111)
T 2qsq_A 11 NVAEGKEVLLLVHN--LPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY-PNA-----SLLIQNIIQN 82 (111)
T ss_dssp EEETTSCEEEEEES--CCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEEC-TTS-----CEEECSCCGG
T ss_pred eeccCCCEEEEEeC--CCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEe-cCC-----cEEEccCccc
Confidence 67789999999975 33344579999975321 1 001 13445443 333 7999999999
Q ss_pred CCeEEEEEeCCCCC----ceEEEEEc
Q psy10361 214 DNGKYQCNPANSQA----KSVMVNVL 235 (236)
Q Consensus 214 d~G~y~C~a~n~~g----~~~~~~v~ 235 (236)
|+|.|+|.+.+..+ ..+.|.|.
T Consensus 83 D~G~Ytc~v~~~~~~~~~~~~~L~V~ 108 (111)
T 2qsq_A 83 DAGFYTLHVIKSDLVNEEATGQFRVY 108 (111)
T ss_dssp GCEEEEEEEEETTSCCEEEEEEEEEE
T ss_pred CCeEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999865 23455553
No 384
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.85 E-value=2e-08 Score=74.56 Aligned_cols=77 Identities=19% Similarity=0.346 Sum_probs=52.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec----------------CeEEeeecCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN----------------EAIISYDSQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+..+.+.+|+++.|.|.+.+. |.+.+.|++. +.........++..+.... ....+|.|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~--~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~L~I~~ 83 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDF--QATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHAS--LTLSTLTVTS 83 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSS--CCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEE--TTEEEEEECS
T ss_pred CcEEEEeCCCcEEEEeEecCC--CceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecC--CCEEEEEECC
Confidence 445788899999999999887 4559999982 1111111111344433221 1346899999
Q ss_pred cCCCCCeEEEEEeCCCC
Q psy10361 210 ARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~ 226 (236)
++.+|+|.|.|.+.|..
T Consensus 84 v~~~D~G~Y~C~~~~~~ 100 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSG 100 (246)
T ss_dssp CCGGGCEEEEEEECCSS
T ss_pred CCHHHCEEEEEEEecCC
Confidence 99999999999999764
No 385
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.85 E-value=3.2e-08 Score=72.15 Aligned_cols=123 Identities=17% Similarity=0.239 Sum_probs=71.0
Q ss_pred CeeEeeCC---eE-EEEecceEecCCcceEEeec---CCCCceEEEEcCCCCCCCeeEEEEEEEEe-cc-----------
Q psy10361 1 VSFVRHRD---IH-LLTTGRYTYTNDQRFRVINN---PTSDDWTLQLKYPQHKDTGIYECQVSFVR-HR----------- 61 (236)
Q Consensus 1 v~w~~~~~---~~-~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~i~~~~~~D~G~Y~C~v~~~~-~~----------- 61 (236)
|.|++... +. .....+..+....|+.+... ....+.+|.|.+++.+|+|.|.|.+.+.. +.
T Consensus 36 v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~ 115 (221)
T 3eow_R 36 LTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLA 115 (221)
T ss_dssp EEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCC
T ss_pred EEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEE
Confidence 46777642 11 22222334444677777652 12357899999999999999999987532 10
Q ss_pred ----------------eeE-E--e-----cceeeEEecCCc--E---EEE---cCCCCCcEEEEEcCCCCCCCEEEEEEe
Q psy10361 62 ----------------DIH-L--L-----TTGRYTYTNDQR--F---RVI---NNPTSDDWTLQLKYPQHKDTGIYECQV 109 (236)
Q Consensus 62 ----------------~~~-~--~-----~~~~~~~~~~~~--~---~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 109 (236)
... + . +...+.|..+.. . ... .........|.|..++.+|.|.|+|.+
T Consensus 116 ~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a 195 (221)
T 3eow_R 116 KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKV 195 (221)
T ss_dssp CCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEE
T ss_pred CCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEE
Confidence 000 1 0 112355643311 0 000 001122357999999999999999999
Q ss_pred ecCCCceeEEEEEEE
Q psy10361 110 STTPHQAHYIYLTVV 124 (236)
Q Consensus 110 ~~~~~~~~~~~l~v~ 124 (236)
.|..... ...+.|.
T Consensus 196 ~n~~~~~-~~~~~v~ 209 (221)
T 3eow_R 196 EHESFEK-PQLLTVS 209 (221)
T ss_dssp CCSCSSS-CEEEEEC
T ss_pred ECCCCCC-CeEEEEE
Confidence 9876433 2444554
No 386
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.85 E-value=7.6e-09 Score=81.50 Aligned_cols=72 Identities=19% Similarity=0.335 Sum_probs=55.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeee-cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYD-SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
+....+.+|+++.|.|.+.+ |. +.+.|++++..+... ....++.. .++ +|.|.+++.+|+|.|+|.|.|
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~--p~i~W~~~~~~~~~~~~~~~r~~~--~~~-----~L~I~~v~~~D~G~Y~C~a~N 322 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QG--MTKVWVSPSNEQVLSQGSNGSVSV--RNG-----DLFFKKVQVEDGGVYTCYAMG 322 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TT--CEEEEECTTSCBCCSCCSSSSEEE--ETT-----EEEESSCCTTSCEEEEEEEEC
T ss_pred ccCceecCCCeEEEEeEeeC-CC--CeEEEEeCCCeeEeecccCCceEe--ecC-----eEEEeecCcccCEEEEEEEec
Confidence 34668899999999999987 54 489999977554321 12224444 443 799999999999999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..|
T Consensus 323 ~~g 325 (361)
T 2xot_A 323 ETF 325 (361)
T ss_dssp SSC
T ss_pred CCC
Confidence 988
No 387
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.85 E-value=4.8e-09 Score=73.85 Aligned_cols=72 Identities=28% Similarity=0.370 Sum_probs=54.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.+.| ..+.|++++..+.. .. ..|.|.+++.+|+|.|+|.+.|.
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~~-~~i~W~~~~~~~~~-----------~~-----~~L~i~~v~~~d~G~Y~C~~~~~ 73 (176)
T 1f2q_A 11 PPWNRIFKGENVTLTCNGNNFFEV-SSTKWFHNGSLSEE-----------TN-----SSLNIVNAKFEDSGEYKCQHQQV 73 (176)
T ss_dssp SSCSEEETTCCEEEECCTTCC-----CCEEEETTEECSC-----------CS-----SEEEECSCCGGGCEEEEEECTTS
T ss_pred CCCcceecCCcEEEEEeCCCCCCc-ceEEEEECCeECCC-----------Cc-----eEEEEeccceecCEEEEEEcCCc
Confidence 445678999999999999887432 46999999887632 11 27999999999999999999998
Q ss_pred CC-ceEEEEE
Q psy10361 226 QA-KSVMVNV 234 (236)
Q Consensus 226 ~g-~~~~~~v 234 (236)
.+ ..+.+.|
T Consensus 74 ~~s~~~~l~V 83 (176)
T 1f2q_A 74 NESEPVYLEV 83 (176)
T ss_dssp SCCCCEEEEE
T ss_pred cccccEEEEE
Confidence 75 4455544
No 388
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.84 E-value=1.6e-08 Score=66.31 Aligned_cols=84 Identities=18% Similarity=0.338 Sum_probs=56.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecC----------CCceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQ----------RGGVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
+..+.+..|+++.|.|...+.+.+...+.|++++..+..... .+++.+ ..+ .+|.|.+++.+|+
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~-~~~-----~sL~I~~v~~~D~ 83 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAP-GPG-----LGLTLQSLTVNDT 83 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEE-CST-----TCEEECSCCGGGC
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEe-CCc-----eEEEEeeCChhhC
Confidence 456788899999999999863223347999998765432111 234433 112 2799999999999
Q ss_pred eEEEEEeCC-CCC---ceEEEEEc
Q psy10361 216 GKYQCNPAN-SQA---KSVMVNVL 235 (236)
Q Consensus 216 G~y~C~a~n-~~g---~~~~~~v~ 235 (236)
|.|.|.+.+ ..| ..+.|.|+
T Consensus 84 G~Y~C~v~~~~~g~~~~~~~L~V~ 107 (117)
T 3q0h_A 84 GEYFCIYHTYPDGTYTGRIFLEVL 107 (117)
T ss_dssp EEEEEEEEEETTCCEEEEEEEEEE
T ss_pred EEEEEEEEECCCCCeEEEEEEEEE
Confidence 999999654 444 34456554
No 389
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.83 E-value=2.3e-08 Score=76.15 Aligned_cols=114 Identities=14% Similarity=0.171 Sum_probs=73.7
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCC-CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEeeCCC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTP-HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRFSPE 168 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 168 (236)
..+.|.+++.+ |.|.|.+.... .....+.+.|. .++..+.+... ...+.+|+.++|.|.+.+.+
T Consensus 50 ~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~-----------~~P~~v~I~~~-~~~~~~G~~~~LtC~v~g~~- 114 (291)
T 1mq8_A 50 KVYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVY-----------WTPERVELAPL-PSWQPVGKNLTLRCQVEGGA- 114 (291)
T ss_dssp EEEEEESCCSC--CCCEEEEECSSCEEEEECEEEEC-----------BCCSCCCBCCC-CSBCCSSCCCEEEEEECCCB-
T ss_pred EEEEEEecccC--CeEEEEEEcCCccEEEEEEEEEe-----------cCCCCCEEecC-CccccCCCCEEEEEEecCcc-
Confidence 35888898854 46999997543 23456667776 33333444332 23477899999999998762
Q ss_pred CCC--eEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 169 PPA--YIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 169 p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
|.. .+.|++++..+...... . .....+|.+......+.+.|+|.|.|..+
T Consensus 115 P~~~l~itW~kg~~~l~~~~~~-------~--~~~~~~l~~~~~~~D~g~~~~C~A~~~l~ 166 (291)
T 1mq8_A 115 PRANLTVVLLRGEKELKREPAV-------G--EPAEVTTTVLVRRDHHGANFSCRTELDLR 166 (291)
T ss_dssp STTTEEEEEESSSSEEEEEECC-------B--TTEEEEEECCCSSSCSSCEEEEEEEEECG
T ss_pred CCCCcEEEEEECCEEeecccCC-------C--CCceEEEEeeeeeccCCceEEEEEEecCC
Confidence 433 58999999887543211 1 11234566655555566699999998754
No 390
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.83 E-value=6.3e-09 Score=74.58 Aligned_cols=68 Identities=15% Similarity=0.245 Sum_probs=50.8
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+|+++.|.|.+.+ |.+.+.|++++..+..... ..........|.|.++..+|+|.|+|.|.|..|
T Consensus 15 ~v~~G~~v~L~C~~~~---~~~~~~w~k~g~~~~~~~~-------~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL---EAREYRLDKEESPAPWDRQ-------NPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVG 82 (196)
T ss_dssp EEETTCCEEEEEECCT---TCCEEEEEETTSCSCSEEE-------CCCSSSSEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cCCCCCcEEEEeeCCC---CCCEEEEEECCCCCccccc-------ccccCCceEEEEeccCCcccCceEEEEEeCCCc
Confidence 7889999999999877 3359999999876532100 000011335899999999999999999999876
No 391
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.83 E-value=3.7e-08 Score=73.72 Aligned_cols=78 Identities=14% Similarity=0.278 Sum_probs=53.6
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee----------cCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD----------SQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~----------~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
...+.+|+++.|.|.+.+.|.+.+.+.|+++. . .+... ....++.+..+. .....+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDT-SKNQVFLKMNSLQT 87 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEET-TTTEEEEEEESCCT
T ss_pred CccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEEC-CCCEEEEEECCCCc
Confidence 34678999999999999875335689999852 1 11110 012344443321 12346899999999
Q ss_pred CCCeEEEEEeCCCC
Q psy10361 213 SDNGKYQCNPANSQ 226 (236)
Q Consensus 213 ~d~G~y~C~a~n~~ 226 (236)
+|+|.|.|.|.|..
T Consensus 88 ~DsG~Y~C~a~n~~ 101 (257)
T 1f3r_B 88 DDTGTYYCTRDLYG 101 (257)
T ss_dssp TCCEEEEEEEESSS
T ss_pred ccCEEEEEEEcccc
Confidence 99999999999984
No 392
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.83 E-value=1.2e-08 Score=71.13 Aligned_cols=72 Identities=26% Similarity=0.423 Sum_probs=54.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
+....+.+|+++.|.|.+.+.| +.+.+.|++++..+... . ..+.+.++..+|.|.|+|.+.|.
T Consensus 11 p~~~~v~~G~~v~l~C~~~~~p-~~~~~~W~~~g~~~~~~-----------~-----~~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 11 PPWINVLQEDSVTLTCQGARSP-ESDSIQWFHNGNLIPTH-----------T-----QPSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp SCCSEEETTCEEEEEEESCCCS-SSSCEEEEETTEECTTC-----------C-----SSEEEEECCGGGCEEEEEEETTS
T ss_pred CCCeEEECCCcEEEEEEecCCC-CcceEEEEECCeEcccC-----------c-----cceEEEecccccCeEEEEEEeCC
Confidence 3445788999999999998874 24689999999877421 1 13667789999999999999987
Q ss_pred CC-ceEEEEE
Q psy10361 226 QA-KSVMVNV 234 (236)
Q Consensus 226 ~g-~~~~~~v 234 (236)
.. ..+.|.|
T Consensus 74 ~~s~~~~l~v 83 (170)
T 3ry4_A 74 SLSDPVHLTV 83 (170)
T ss_dssp BCCCCEEEEE
T ss_pred CceEeEEEEE
Confidence 64 4455544
No 393
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.83 E-value=2.8e-08 Score=72.81 Aligned_cols=80 Identities=18% Similarity=0.267 Sum_probs=54.5
Q ss_pred cEEEecCCeEEEEeEEeeCCCC-CCeEEEeecCeEEe-----------ee---cCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEP-PAYIFWNHNEAIIS-----------YD---SQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p-~~~v~W~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
.+.+.+|+++.|.|.+.+.+.+ ...+.|++++.... .. ....+.............+|.|.+++.
T Consensus 13 pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 92 (226)
T 4f80_A 13 PILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTA 92 (226)
T ss_dssp CEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCG
T ss_pred CEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCch
Confidence 4678899999999999865432 23699998763211 00 001223322222223456899999999
Q ss_pred CCCeEEEEEeCCCCC
Q psy10361 213 SDNGKYQCNPANSQA 227 (236)
Q Consensus 213 ~d~G~y~C~a~n~~g 227 (236)
+|+|.|+|.|.|..|
T Consensus 93 ~D~G~Y~C~a~n~~~ 107 (226)
T 4f80_A 93 SDSGKYLCYFQDGDF 107 (226)
T ss_dssp GGCEEEEEEEEETTE
T ss_pred HHCeeEEEEEECCCc
Confidence 999999999999887
No 394
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.82 E-value=2.1e-08 Score=74.51 Aligned_cols=78 Identities=18% Similarity=0.354 Sum_probs=53.9
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eee-----------ecCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISY-----------DSQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~-----------~~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
....+.+|+++.|.|.+.+.|.+.+.+.|+++. .. +.. .....++.+..+ ......+|.|.++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v 88 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRD-NSKNTLYLQMNSL 88 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEE-TTTTEEEEEECSC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEe-CCCCEEEEEECcC
Confidence 457888999999999999875334589999842 11 100 011234444332 1223467999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.|.
T Consensus 89 ~~~D~G~Y~C~~~n~ 103 (247)
T 2ghw_B 89 RAEDTAVYYCARDRS 103 (247)
T ss_dssp CGGGCEEEEEEEEET
T ss_pred CHHHCEEEEEeeecc
Confidence 999999999999998
No 395
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.82 E-value=6.5e-09 Score=66.85 Aligned_cols=65 Identities=20% Similarity=0.245 Sum_probs=48.5
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
.+.+|++++|.|.+.+. + ..+.|++++..+.... . ........|.|.+++.+|+|.|.|.+.|..
T Consensus 15 ~v~~G~~VtL~C~~~~~--~-~~~~w~k~g~~~~~~~----~-----~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPRM--A-AWVQLWLNGTLRFDKE----K-----DKEQDAAEFSFAVTNLEDAGTYQCRYQVSE 79 (105)
T ss_dssp SCCTTCEEEEEEECCSS--C-EEEEEEETTEEEEEEE----E-----CTTCSEEEEEEECCSGGGCEEEEEEEEEET
T ss_pred CcCcCCCEEEEEEcCCC--C-cEEEEEECCccceeee----c-----cCCCCEEEEEECCCCHHHCeEEEEEEEcCC
Confidence 57789999999999764 2 4789999987653210 0 011233579999999999999999998853
No 396
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.82 E-value=1.1e-07 Score=59.04 Aligned_cols=83 Identities=22% Similarity=0.385 Sum_probs=59.1
Q ss_pred CCcEEEecCCeEEEEeEEee-CCCCCCeEEEeecC----eEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVRF-SPEPPAYIFWNHNE----AIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQC 220 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~-~p~p~~~v~W~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C 220 (236)
.....+..|+.+.|.|.+.+ .+.| .+.|-+-+ ..|.. +...-...+......|.+.++...|.|.|+|
T Consensus 18 ~S~hsv~~G~~f~leCpv~yc~~rP--~VtWcKln~~~c~~L~~-----~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRC 90 (120)
T 2aw2_A 18 QSEHSILAGDPFELECPVKYCANRP--HVTWCKLNGTTCVKLED-----RQTSWKEEKNISFFILHFEPVLPNDNGSYRC 90 (120)
T ss_dssp TEEEEEETTSCEEEEEEEECSSSCC--EEEEEEECSSCEEECCS-----SCEEEEECSSCEEEEEEESSCCGGGCEEEEE
T ss_pred cccceEecCCeEEEEccEEeccCCC--ceEEEecCCceEEECcc-----ccccceecCCeeEEEEEEeeeeEcCCcceEE
Confidence 34567889999999999988 3444 99999865 33321 1111223333455689999999999999999
Q ss_pred EeCCCCC----ceEEEEEc
Q psy10361 221 NPANSQA----KSVMVNVL 235 (236)
Q Consensus 221 ~a~n~~g----~~~~~~v~ 235 (236)
.|.+..| .++++.|.
T Consensus 91 sAn~~sg~ieSHsvtI~Vt 109 (120)
T 2aw2_A 91 SANFQSNLIESHSTTLYVT 109 (120)
T ss_dssp EEEETTEEEECCCEEEEEE
T ss_pred EeeCCCCcEEeeEEEEEEE
Confidence 9999987 55666654
No 397
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.81 E-value=6.6e-08 Score=62.69 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=56.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|++++|.|.+.+.+ .+.+.|++... .+... ....+....... ...+|.|.+++.+|
T Consensus 11 p~~~~~~~G~~v~L~C~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~~~D 85 (111)
T 1i3g_L 11 HKFMSTSVGDRVSITCKASQDV--GTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSG---TDFTLTISNVQSED 85 (111)
T ss_dssp CSEEECCTTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCEEEEcCCCCEEEEEEeCCCC--CCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCC---CEEEEEECCCCHHH
Confidence 4467788999999999998763 45899998641 12110 112344433211 34579999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEE
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|.|.|.+.+.. |....|.|
T Consensus 86 sG~Y~C~~~~~~~~~fg~GT~l~V 109 (111)
T 1i3g_L 86 LADYFCQQYSSYPLTFGAGTKLEL 109 (111)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEC
T ss_pred CEEEEEEEecCCceEECCCeEEEE
Confidence 999999998863 34445544
No 398
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.81 E-value=3.7e-08 Score=73.65 Aligned_cols=79 Identities=18% Similarity=0.328 Sum_probs=53.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e--EEe--e---------ecCCCceEEEeecCcceEEEEEEccc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A--IIS--Y---------DSQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~--~~~--~---------~~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+....+.+|+++.|.|.+.+.+.+.+.+.|++.. . ... . .....++.+..+. .....+|.|.++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v 93 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDT-SKNQVYLQLKSV 93 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEG-GGTEEEEEECSC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEec-CCceEEEEECCC
Confidence 4455688999999999999864455699999832 1 111 0 0112334433221 123457999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.|.
T Consensus 94 ~~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 94 SSEDTATYYCSYFDS 108 (257)
T ss_dssp CGGGCEEEEEEEECT
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999997
No 399
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.81 E-value=4.1e-08 Score=71.12 Aligned_cols=77 Identities=18% Similarity=0.311 Sum_probs=53.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+. |.+.+.|+++. . .+... ....++...... ...+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQS--ISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG---TDFTLTISDLECAD 82 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSC--CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEECSCCGGG
T ss_pred CCeEEEcCCCCEEEEEEecCC--CCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC---CEEEEEECCCChHH
Confidence 446788999999999999887 45699999842 1 11110 012233333222 34579999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|.|.|.|..+
T Consensus 83 ~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 83 AATYYCQSTYENP 95 (213)
T ss_dssp CEEEEEEECCSST
T ss_pred CEEEEEecCCCCc
Confidence 9999999999654
No 400
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.80 E-value=3.6e-08 Score=71.62 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=52.0
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC---eE--Eeeec----------CCCceEEEeecCcceEEEEEEcccCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE---AI--ISYDS----------QRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~---~~--~~~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
.+.+.+|+++.|.|.+.+.. |.+.+.|++.. .. +.... ..+++.+... ....+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~ 84 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQH-STYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS---GADRYLSISNIQP 84 (218)
T ss_dssp EEEEETTSCEEEEEEECGGG-TTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE---TTEEEEEESSCCG
T ss_pred cEEECCCCcEEEEEECCCCC-CCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC---CceEEEEEccCCc
Confidence 67888999999999998872 33599999832 11 11101 1123333221 1345799999999
Q ss_pred CCCeEEEEEeCCCCC
Q psy10361 213 SDNGKYQCNPANSQA 227 (236)
Q Consensus 213 ~d~G~y~C~a~n~~g 227 (236)
+|+|.|.|.+.|..|
T Consensus 85 ~D~G~Y~C~~~~~~~ 99 (218)
T 3s96_B 85 EDEAIYICGVGDTIK 99 (218)
T ss_dssp GGCEEEEEEEEEEET
T ss_pred ccCEEEEEEEecCCC
Confidence 999999999988764
No 401
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.80 E-value=2.1e-07 Score=61.28 Aligned_cols=88 Identities=18% Similarity=0.414 Sum_probs=57.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEee-ec----------CCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISY-DS----------QRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~-~~----------~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+..+.+.+|++++|.|...+.+.....+.|++.. ..+.. .. ..++..+..+. .....+|.|.+
T Consensus 9 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~ 87 (121)
T 2xt1_B 9 SGGGLVQAGGSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDD-DKNILYLQMND 87 (121)
T ss_dssp ECCEEEETTCCEEEEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEET-TTTEEEEEECS
T ss_pred CCCEEEeCCCCEEEEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeC-CCCEEEEEECC
Confidence 3457889999999999998643234589999843 11211 01 12344444332 22456899999
Q ss_pred cCCCCCeEEEEEeCCC-CCceEEEEE
Q psy10361 210 ARPSDNGKYQCNPANS-QAKSVMVNV 234 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~-~g~~~~~~v 234 (236)
++.+|+|.|.|.+... .|....|.|
T Consensus 88 v~~~DsG~Y~C~~~~~~fg~Gt~l~v 113 (121)
T 2xt1_B 88 LKPEDTAMYYCKASGSSWGQGTQVTV 113 (121)
T ss_dssp CCGGGCEEEEEEETTCCCCCCEEEEE
T ss_pred CCHHHCEEEEEEEEeCEECCCEEEEE
Confidence 9999999999999743 365555555
No 402
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.79 E-value=3.9e-08 Score=71.62 Aligned_cols=78 Identities=17% Similarity=0.325 Sum_probs=52.9
Q ss_pred CcEEEecCCeEEEEeEEeeCCCC---CCeEEEeecCeEEeeecC------------CCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEP---PAYIFWNHNEAIISYDSQ------------RGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p---~~~v~W~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
..+.+..|+++.|.|.+.+.|.+ ...+.|++++..+..... .++..+..+.......+|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 88 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK 88 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc
Confidence 45678899999999998776432 348999998744422111 122322211111123589999999
Q ss_pred CCCCeEEEEEeCC
Q psy10361 212 PSDNGKYQCNPAN 224 (236)
Q Consensus 212 ~~d~G~y~C~a~n 224 (236)
.+|+|.|+|.+.|
T Consensus 89 ~~D~G~Y~C~~~~ 101 (222)
T 3sbw_C 89 LQDAGVYRCMISY 101 (222)
T ss_dssp GGGCEEEEEEEES
T ss_pred cccCeEEEEEEEe
Confidence 9999999999999
No 403
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.79 E-value=4e-08 Score=65.22 Aligned_cols=81 Identities=21% Similarity=0.245 Sum_probs=54.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEee-ecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAIISY-DSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+.+.+|+++.|.|...+...+...+.|++. +..... ....++........ ....+|+|.+++.+|+|.|.|.+
T Consensus 7 p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~-~~~~sL~I~~v~~~DsG~Y~C~~ 85 (126)
T 3moq_A 7 PRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKG-SKSFSLRISDLRVEDSGTYKCQA 85 (126)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETT-TTEEEEEECSCCGGGCEEEEEEE
T ss_pred CceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCC-CCEEEEEECcCChHhCEEEEEEE
Confidence 446788999999999999865323458999984 221110 01123343322221 24568999999999999999999
Q ss_pred CCCCC
Q psy10361 223 ANSQA 227 (236)
Q Consensus 223 ~n~~g 227 (236)
.+..+
T Consensus 86 ~~~~~ 90 (126)
T 3moq_A 86 FYVFF 90 (126)
T ss_dssp EEEEE
T ss_pred EEcCC
Confidence 88653
No 404
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.79 E-value=1.9e-08 Score=65.74 Aligned_cols=90 Identities=18% Similarity=0.288 Sum_probs=55.2
Q ss_pred CCcEEEecCCeEEEEeEEee-CCCCC--CeEEEeecCeE--Eee--------ecCCCceEEEeecCcc--eEEEEEEccc
Q psy10361 146 GPEVFIENGSTINLTCVVRF-SPEPP--AYIFWNHNEAI--ISY--------DSQRGGVNVITEKGET--TVSYLLIQKA 210 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~-~p~p~--~~v~W~~~~~~--~~~--------~~~~~~~~~~~~~~~~--~~~~L~i~~v 210 (236)
+..+.+..|+++.|.|.+.. .+.+. ..+.|++.+.. +.. ....++..+....... ...+|.|.++
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 34477889999999999953 32221 14999997522 110 0112333332211000 1357999999
Q ss_pred CCCCCeEEEEEeCC-CCC---ceEEEEEc
Q psy10361 211 RPSDNGKYQCNPAN-SQA---KSVMVNVL 235 (236)
Q Consensus 211 ~~~d~G~y~C~a~n-~~g---~~~~~~v~ 235 (236)
+.+|+|.|.|.+.+ ..| ..+.|.|+
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~ 115 (118)
T 3udw_C 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVL 115 (118)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ChHHCeEEEEEEEECCCCCccceEEEEEE
Confidence 99999999999998 554 44555554
No 405
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.79 E-value=4.8e-08 Score=73.00 Aligned_cols=81 Identities=11% Similarity=0.289 Sum_probs=55.3
Q ss_pred cCCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee-----------cCCCceEEEeecCcceEEEEEE
Q psy10361 144 IGGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD-----------SQRGGVNVITEKGETTVSYLLI 207 (236)
Q Consensus 144 ~~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i 207 (236)
..+..+.+.+|+++.|.|.+.+.+.+.+.+.|++.. . .+... ...+++.+..+. .....+|.|
T Consensus 11 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I 89 (256)
T 3juy_B 11 VQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADT-SANTAYMEL 89 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEET-TTTEEEEEE
T ss_pred EecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEec-CCCEEEEEE
Confidence 335578899999999999998843345689999742 1 11110 112344443222 224467999
Q ss_pred cccCCCCCeEEEEEeCCC
Q psy10361 208 QKARPSDNGKYQCNPANS 225 (236)
Q Consensus 208 ~~v~~~d~G~y~C~a~n~ 225 (236)
.+++.+|+|.|.|.+.|.
T Consensus 90 ~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 90 RSLRSADTAVYYCARVGE 107 (256)
T ss_dssp CSCCGGGCEEEEEEECCC
T ss_pred CCCCcccCEEEEEeEEec
Confidence 999999999999999997
No 406
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.79 E-value=1.2e-08 Score=72.41 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=47.9
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..+.+|+++.|.|.+.+ |.+.+.|++++... .... ..|.|.++..+|+|.|+|.+.|..|
T Consensus 17 ~~v~~G~~v~L~C~~~~---~~~~~~W~k~g~~~-----------~~~~-----~~L~i~~v~~~D~G~Y~C~a~n~~g 76 (184)
T 2gi7_A 17 SLVPLEKPVTLRCQGPP---GVDLYRLEKLSSSR-----------YQDQ-----AVLFIPAMKRSLAGRYRCSYQNGSL 76 (184)
T ss_dssp SEEETTCCEEEEEECST---TCSEEEEEETTTCC-----------EESS-----SEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ccccCCCcEEEEEeCCC---CCCEEEEEECCccc-----------cCcc-----cEEEECcCChhhCceEEEEEEcCCC
Confidence 37889999999999866 33599999987541 1122 2799999999999999999999764
No 407
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.78 E-value=3.1e-08 Score=70.53 Aligned_cols=68 Identities=9% Similarity=0.220 Sum_probs=50.2
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+|++++|.|.+.+. +..+.|++++..+...... . ........|.|.+++.+|+|.|+|.+.|..+
T Consensus 14 ~v~~G~~v~L~C~~~~~---~~~~~w~k~g~~~~~~~~~-~------~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYG---AVEYQLHFEGSLFAVDRPK-P------PERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp EEETTCCEEEEEECCTT---CCEEEEEETTEEEEEECCS-S------CTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cCCCCCCEEEEEecCCC---CCEEEEEECCCcccccccc-c------CCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 68899999999998643 3589999999876532111 0 0011235799999999999999999988643
No 408
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.78 E-value=5.5e-08 Score=70.41 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=53.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe--EE---e------eecCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA--II---S------YDSQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~--~~---~------~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.| .+.+.|++++. .+ . ......++...... ...+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSI--GNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG---TDFTLSINSVETED 82 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CccEEEeCCCcEEEEEECCCCC--CCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC---CEEEEEECCCChhh
Confidence 4567889999999999998874 45899998531 11 0 00111233333221 33589999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|.|.+.|..+
T Consensus 83 ~G~Y~C~~~~~~~ 95 (213)
T 3d9a_L 83 FGMYFCQQSNSWP 95 (213)
T ss_dssp CEEEEEEECSSSS
T ss_pred CEEEEEeeecCCc
Confidence 9999999999875
No 409
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.78 E-value=1.1e-08 Score=83.06 Aligned_cols=80 Identities=25% Similarity=0.412 Sum_probs=56.6
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-EEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-IISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
+....+.+|+++.|.|.+. | .+.+.|++++. .+.......++... .++ +|.|.+++.+|+|.|+|.|.|
T Consensus 359 ~~~~~v~~G~~~~l~C~~~--p--~p~i~W~~~~~~~~~~~~~~~~~~~~-~~g-----~L~i~~v~~~D~G~Y~C~a~N 428 (452)
T 3zyi_A 359 PRDLNISEGRMAELKCRTP--P--MSSVKWLLPNGTVLSHASRHPRISVL-NDG-----TLNFSHVLLSDTGVYTCMVTN 428 (452)
T ss_dssp CCCEECCTTSCCEECCBCC--T--TSEEEEECTTSCEECSSCCCSSCEEC-TTS-----CEECSSCCTTCCEEEEEEEEC
T ss_pred cccccccCCCEEEEEEeCC--C--CCcEEEEeCCCcEeccCCCCCCEEEC-CCC-----eEEEeecCHHHCEEEEEEEEc
Confidence 4567889999999999986 4 45999999554 33221122233332 233 699999999999999999999
Q ss_pred CCC---ceEEEEEc
Q psy10361 225 SQA---KSVMVNVL 235 (236)
Q Consensus 225 ~~g---~~~~~~v~ 235 (236)
..| .++.|.|.
T Consensus 429 ~~G~~~~~~~l~v~ 442 (452)
T 3zyi_A 429 VAGNSNASAYLNVS 442 (452)
T ss_dssp SSCEEEEEEEEEC-
T ss_pred CCCcEEEEEEEEEE
Confidence 998 34455553
No 410
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.78 E-value=7.5e-08 Score=68.01 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=53.9
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
..+.+|+++.|.|.+.+.|.|...+.|++++..+.... ... ....|.|. ..+|+|.|+|.+.|....
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~-~~~----------~~~~l~i~--~~~d~G~Y~C~~~n~~~~ 74 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA-LPG----------QKTEFKVD--SDDQWGEYSCVFLPEPMG 74 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTT-CCC----------SEEEEEEC--GGGCCEEEEEEEESTTSC
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccc-ccC----------CcEEEEEe--chhhCeEEEEEEECCcCc
Confidence 46678999999999998865555999999998875421 110 12356665 689999999999986666
Q ss_pred eEEEEE
Q psy10361 229 SVMVNV 234 (236)
Q Consensus 229 ~~~~~v 234 (236)
.+.|.|
T Consensus 75 ~~~l~V 80 (184)
T 3b5h_A 75 TANIQL 80 (184)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666655
No 411
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.78 E-value=2.6e-08 Score=71.86 Aligned_cols=67 Identities=19% Similarity=0.361 Sum_probs=48.4
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-EEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-IISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
..+.+|+++.|.|.+.|.|. +.+.|++... .+ .+.... .. ....|.|.++..+|+|.|.|.|.|..|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~--p~i~W~~~~~~~~-----~~~~~~--~~---~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 78 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCES--PFFSWRTQIDSPL-----NGKVTN--EG---TTSTLTMNPVSFGNEHSYLCTATCESR 78 (202)
T ss_dssp EEEETTSCEEEEEEEESCSS--CEEEEEETTCCCC-----SSEEEE--ET---TEEEEEESSCCGGGCSEEEEEEEETTE
T ss_pred EEEcCCCcEEEEEeecCCCC--CeEEEECCCCCCc-----cceEEE--cC---CccEEEECcCCHHHCEEEEEEEEECCc
Confidence 44558999999999998854 5899988431 11 011111 11 124699999999999999999999986
No 412
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.78 E-value=1.9e-08 Score=65.14 Aligned_cols=83 Identities=22% Similarity=0.318 Sum_probs=55.4
Q ss_pred CcEEEecCCeEEEEeEE-eeCCCCCCeEEEeecC-eEEeee-----------cCCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 147 PEVFIENGSTINLTCVV-RFSPEPPAYIFWNHNE-AIISYD-----------SQRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~-~~~p~p~~~v~W~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
..+.+.+|++++|.|.. .+. +.+.+.|++.. ..+... ...++..+.. ...+|.|.+++.+
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~--~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~-----~~~sL~I~~v~~~ 83 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLG--PYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE-----NNGALHISNVRKE 83 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCC--SCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT-----TTCCEEESSCCGG
T ss_pred CCEEEecCCcEEEeCCccCCC--CcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC-----CCccEEECCCCcc
Confidence 35788899999999998 444 44589999842 222110 0112333321 1237999999999
Q ss_pred CCeEEEEEeCCCCC--ceEEEEEcC
Q psy10361 214 DNGKYQCNPANSQA--KSVMVNVLN 236 (236)
Q Consensus 214 d~G~y~C~a~n~~g--~~~~~~v~~ 236 (236)
|+|.|.|.+.+... ..+.|.|+|
T Consensus 84 DsG~Y~C~v~~~~~~~~~~~L~V~d 108 (110)
T 2ptt_A 84 DKGTYYMRVLRETENELKITLEVFD 108 (110)
T ss_dssp GCEEEEEEEESSSBCCEEEEEEEEC
T ss_pred cCeEEEEEEEcCCCcEEEEEEEEEc
Confidence 99999999987664 345666654
No 413
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.78 E-value=6.7e-08 Score=69.96 Aligned_cols=75 Identities=19% Similarity=0.350 Sum_probs=52.8
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeE---Eeee------cCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAI---ISYD------SQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~---~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
...+.+|+++.|.|.+.+. |.+.+.|++. +.. +... ....++...... ...+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D~G 83 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKL--SDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSG---NMATLTISKAQAGDEA 83 (213)
T ss_dssp EEEEETTSCEEEEEECSST--TTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET---TEEEEEESSCCGGGCE
T ss_pred cEEEeCCCCEEEEEEcCCC--CCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecC---CEEEEEECCCChhhCE
Confidence 6788999999999999877 5569999983 211 1110 011233332221 3457999999999999
Q ss_pred EEEEEeCCCCC
Q psy10361 217 KYQCNPANSQA 227 (236)
Q Consensus 217 ~y~C~a~n~~g 227 (236)
.|.|.+.|..|
T Consensus 84 ~Y~C~~~~~~~ 94 (213)
T 3mj8_L 84 DYYCQSWDGTN 94 (213)
T ss_dssp EEEEEEEETTT
T ss_pred EEEEEeccCCc
Confidence 99999999875
No 414
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.78 E-value=1.6e-08 Score=73.05 Aligned_cols=75 Identities=24% Similarity=0.316 Sum_probs=54.9
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
.+.+..|+++.|.|.+ +.|.|.+.|.|++.+..+ ++..... ....|.|.+++.+|+|.|.|.|.|..+
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l------~~~~~~~-----~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 83 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL------GAVQSDT-----GRSVLTVRNASLSAAGTRVCVGSCGGR 83 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT------CCEEEES-----SEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc------CcEEecC-----CccEEEECccCcccCceEEEEEEeCCC
Confidence 3688899999999999 875544499999854322 2222221 224799999999999999999999886
Q ss_pred ---ceEEEEE
Q psy10361 228 ---KSVMVNV 234 (236)
Q Consensus 228 ---~~~~~~v 234 (236)
..+.|.|
T Consensus 84 ~~~~~~~ltV 93 (210)
T 1gsm_A 84 TFQHTVQLLV 93 (210)
T ss_dssp EEEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 3345544
No 415
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.78 E-value=2.7e-08 Score=69.87 Aligned_cols=80 Identities=16% Similarity=0.248 Sum_probs=56.0
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeec---------CCCceEEEeecCcceEEEEEEcccCCCCCeEE
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDS---------QRGGVNVITEKGETTVSYLLIQKARPSDNGKY 218 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y 218 (236)
.+.+..|++++|.|.+. . |.+.+.|++++..+.... .+++..+...++ +|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~VtL~c~~~-~--~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~-----sL~I~~v~~~DsG~Y 75 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-V--PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG-----SLTIYNLTSSDEDEY 75 (171)
T ss_dssp EEEEETTCCEEECCCCS-S--CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC-----CEEECSCCGGGCEEE
T ss_pred EEEEEcCCCEEEcCCCC-C--CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC-----eEEECCCChhhCceE
Confidence 35677899999999883 3 556999999887543211 112333322233 799999999999999
Q ss_pred EEEeCCCCC-ceEEEEEc
Q psy10361 219 QCNPANSQA-KSVMVNVL 235 (236)
Q Consensus 219 ~C~a~n~~g-~~~~~~v~ 235 (236)
.|.+.|..| ..+.|.|.
T Consensus 76 ~C~~~n~~~~~~~~L~V~ 93 (171)
T 1ccz_A 76 EMESPNITDTMKFFLYVL 93 (171)
T ss_dssp EEECTTCCSCEEEEEEEE
T ss_pred EEEEeCCCCcEEEEEEEE
Confidence 999999887 33455553
No 416
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.77 E-value=2.9e-08 Score=72.30 Aligned_cols=80 Identities=16% Similarity=0.280 Sum_probs=54.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEe---ee-----------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAIIS---YD-----------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~---~~-----------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+....+.+|+++.|.|.+.+.+.+.+.+.|+++ +..+. .. ...+++.+..+. .....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 85 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLET-SATTAYLQINN 85 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEG-GGTEEEEEECS
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEec-CCCEEEEEECC
Confidence 345678899999999999987433568999986 33221 00 012344433221 11345899999
Q ss_pred cCCCCCeEEEEEeCCCC
Q psy10361 210 ARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~ 226 (236)
++.+|+|.|.|.+.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~ 102 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTI 102 (219)
T ss_dssp CCGGGCEEEEEEEEETT
T ss_pred CCcccCEEEEEEEeccC
Confidence 99999999999999975
No 417
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.77 E-value=9.4e-08 Score=69.08 Aligned_cols=77 Identities=16% Similarity=0.267 Sum_probs=54.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---ee------ecCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SY------DSQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+....+.+|+++.|.|.+.+.| .+.+.|+++. ..+ .. .....+....... ....|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 81 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESV--TSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG---TDFTLTIDPVEADD 81 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCcEEEcCCCCEEEEeeCCCcc--CCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC---CEEEEEECCCCHHH
Confidence 5567889999999999998874 3589999842 211 10 0111233333221 33589999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|.|.+.|..+
T Consensus 82 ~G~Y~C~~~~~~~ 94 (210)
T 1lk3_L 82 TAIYFCQQSWNGP 94 (210)
T ss_dssp CEEEEEEECSSSS
T ss_pred CeEEEEEEEcCCC
Confidence 9999999999875
No 418
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.77 E-value=2.7e-08 Score=71.76 Aligned_cols=73 Identities=18% Similarity=0.298 Sum_probs=54.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEee---------ecCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISY---------DSQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+....+.+|+++.|.|.+.+. |.+.+.|++++..+.. .....+.... . ..|.|.++..+|.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~-----~~L~i~~v~~~D~G 78 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTYSGF--SSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS--S-----SGITFSSVTRKDNG 78 (212)
T ss_dssp CSEEEEETTCCEEEECEEESC--SSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE--T-----TEEEESCCCGGGCE
T ss_pred CCCeEEEcCCCEEEEeEeCCC--CCcEEEEEECCCceeeEEecCCcccccccCcEEee--c-----eeEEEcccCcccCe
Confidence 456788999999999999987 5569999998755311 0112233322 1 37999999999999
Q ss_pred EEEEEeCCCCC
Q psy10361 217 KYQCNPANSQA 227 (236)
Q Consensus 217 ~y~C~a~n~~g 227 (236)
.|+|.+.|..|
T Consensus 79 ~Y~C~~~~~~g 89 (212)
T 1f97_A 79 EYTCMVSEEGG 89 (212)
T ss_dssp EEEEEEEETTS
T ss_pred EEEEEEEccCC
Confidence 99999999865
No 419
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.77 E-value=6.3e-08 Score=72.47 Aligned_cols=81 Identities=11% Similarity=0.292 Sum_probs=55.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---eee-----------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SYD-----------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+....+.+|+++.|.|.+.+.|.+.+.+.|+++. ..+ ... ...+++.+..+. .....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 85 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDK-PSSTAYMQLSS 85 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEET-TTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEec-CCCEEEEEECc
Confidence 4457888999999999998875335689999842 221 110 012344443321 12346899999
Q ss_pred cCCCCCeEEEEEeCCCCC
Q psy10361 210 ARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~g 227 (236)
++.+|+|.|.|.+.|..|
T Consensus 86 v~~~DsG~Y~C~~~n~~g 103 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYG 103 (256)
T ss_dssp CCGGGCEEEEEEECCTTS
T ss_pred CChhhCEEEEEEEeeccC
Confidence 999999999999999855
No 420
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.76 E-value=1.5e-07 Score=62.42 Aligned_cols=87 Identities=15% Similarity=0.312 Sum_probs=57.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCC--CCCeEEEeecC-----eEEeee------cCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPE--PPAYIFWNHNE-----AIISYD------SQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~--p~~~v~W~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
+..+.+.+|+++.|.|.+.+.+. ....+.|++.. ..+... ....+....... ...+|.|.+++.
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~sL~I~~v~~ 84 (126)
T 4ffy_L 8 PASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSE---TDFTLTIDSVET 84 (126)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCG
T ss_pred CCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCC---CEEEEEECCCCH
Confidence 44578899999999999977531 03479999853 112110 112333333222 346899999999
Q ss_pred CCCeEEEEEeCCCC----CceEEEEEc
Q psy10361 213 SDNGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 213 ~d~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
+|+|.|.|.+.+.. |....|.|.
T Consensus 85 ~DsG~Y~C~~~~~~~~~fg~gT~L~V~ 111 (126)
T 4ffy_L 85 DDAATYYCQQNNEDPYTFGGGTKLEIK 111 (126)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred HHCEEEEEEEecCCCcEECCCEEEEEe
Confidence 99999999999864 455566654
No 421
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.76 E-value=2.6e-08 Score=70.89 Aligned_cols=60 Identities=22% Similarity=0.439 Sum_probs=48.7
Q ss_pred EEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcc-cCCCCCeEEEEEeCCCCCc
Q psy10361 150 FIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQK-ARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 150 ~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~y~C~a~n~~g~ 228 (236)
....|+++.|.|.+.+ + + .+.|++++..+... .++ +|.|.+ +..+|+|.|+|.|.|..|.
T Consensus 10 v~~~G~~v~L~C~~~~-~-~--~i~W~k~g~~l~~~----------~~~-----~L~I~~~~~~~D~G~Y~C~a~n~~g~ 70 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-D-E--NLKWEKNGQELPQK----------HDK-----HLVLQDFSEVEDSGYYVCYTPASNKN 70 (186)
T ss_dssp EEEETTEEEEECSSCC-C-T--TCEEEETTEEECSC----------CCS-----EEEEESCCTTTSCEEEEEECSSCCCC
T ss_pred EEeCCcEEEEEEeCCC-C-C--ceEEEECCEECCCC----------CCC-----EEEECCCCccccCEEEEEEEEeCCCc
Confidence 3467999999999876 2 3 49999999887531 111 699999 9999999999999999873
No 422
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.75 E-value=5.9e-08 Score=70.84 Aligned_cols=78 Identities=17% Similarity=0.422 Sum_probs=52.7
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeee-------------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYD-------------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~-------------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
...+.+|+++.|.|.+.+.+.+.+.+.|++.. .. +... ...++..+..+. .....+|.|.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 87 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDN-SQSILYLQMNT 87 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEET-TTTEEEEEECS
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEEC-CCCeEEEEECc
Confidence 45778999999999998764224589999853 11 1100 012344443322 12345899999
Q ss_pred cCCCCCeEEEEEeCCCC
Q psy10361 210 ARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~ 226 (236)
++.+|+|.|.|.+.|..
T Consensus 88 v~~~D~G~Y~C~~~~~~ 104 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDG 104 (222)
T ss_dssp CCGGGCEEEEEEECCCS
T ss_pred CCcccCeEEEEEEeccC
Confidence 99999999999999864
No 423
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.75 E-value=2.1e-07 Score=60.40 Aligned_cols=89 Identities=17% Similarity=0.243 Sum_probs=58.2
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEeeec------CCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISYDS------QRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
.+..+.+.+|+++.|.|...... ....+.|++... .+.... ..++..+..+ ......+|.|.+++.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~-~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~~~~~ 84 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGW-KDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDN-QRDFIFTVTMEDLRMS 84 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGG-TTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred CCCEEEEeCCCcEEEEeECCCCc-ccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEEC-CcCCEEEEEEccCCHH
Confidence 34567889999999999997642 223699998642 121111 1133443322 1224568999999999
Q ss_pred CCeEEEEEeCCCCC---ceEEEEEc
Q psy10361 214 DNGKYQCNPANSQA---KSVMVNVL 235 (236)
Q Consensus 214 d~G~y~C~a~n~~g---~~~~~~v~ 235 (236)
|+|.|.|.+.+... ..+.|.|.
T Consensus 85 DsG~Y~C~v~~~~~~~~~~v~L~V~ 109 (113)
T 1zox_A 85 DAGIYWCGITKGGLDPMFKVTVNIG 109 (113)
T ss_dssp GCEEEEEEECCSSSCCEEEEEEEEE
T ss_pred HCEEEEEeeEcCCCCccEEEEEEEE
Confidence 99999999998753 34455553
No 424
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.75 E-value=5e-08 Score=70.58 Aligned_cols=87 Identities=18% Similarity=0.367 Sum_probs=57.1
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---eeec----------CCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SYDS----------QRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
....+..|+++.|.|.+.+.+.+.+.+.|+++. ... .... ..++..+..+. .....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDT-SKNQYYLDLNSVT 86 (210)
T ss_dssp SCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEG-GGTEEEEEECSCC
T ss_pred CCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecC-CCCEEEEEECCCC
Confidence 345778999999999998864323689999852 221 1100 12344443321 1134589999999
Q ss_pred CCCCeEEEEEeCCCC--CceEEEEE
Q psy10361 212 PSDNGKYQCNPANSQ--AKSVMVNV 234 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~--g~~~~~~v 234 (236)
.+|+|.|.|.+.|.. +....|.|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~l~V 111 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQGTLVTV 111 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCCEEEEE
T ss_pred cccCEEEEEEEecCcccccceEEEe
Confidence 999999999999963 44455554
No 425
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.75 E-value=1.1e-07 Score=61.62 Aligned_cols=86 Identities=14% Similarity=0.290 Sum_probs=56.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCC--CCCeEEEeecC--e--E-Eeee------cCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPE--PPAYIFWNHNE--A--I-ISYD------SQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~--p~~~v~W~~~~--~--~-~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
+..+.+.+|+++.|.|.+.+.+. ..+.+.|++.. . . +... ...++....... ...+|.|.+++.
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~~ 84 (111)
T 1j05_L 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR---TDFTLIIDPVEA 84 (111)
T ss_dssp CSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCG
T ss_pred CCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccC---CEEEEEECCCCc
Confidence 44567889999999999977631 13479999853 1 1 2110 112344433221 345799999999
Q ss_pred CCCeEEEEEeCCCC----CceEEEEE
Q psy10361 213 SDNGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 213 ~d~G~y~C~a~n~~----g~~~~~~v 234 (236)
+|+|.|.|.+.+.. |....|.|
T Consensus 85 ~DsG~Y~C~~~~~~~~~fg~gT~l~V 110 (111)
T 1j05_L 85 DDVATYYCQQTNEDPYTFGGGTKLEI 110 (111)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEC
T ss_pred ccCEEEEEEEecCCCCEECCCEEEEE
Confidence 99999999998863 44445544
No 426
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.74 E-value=1.3e-07 Score=70.28 Aligned_cols=77 Identities=17% Similarity=0.302 Sum_probs=53.6
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.| .+.+.|++.. ..+... ....++...... ...+|.|.++..+|
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~--~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 85 (250)
T 3esu_F 11 TSSLSASLGDRVTISCRASQDI--RNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG---TDYSLTISNLEQED 85 (250)
T ss_dssp CSEEEECTTCCEEEEEEESSCC--TTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCEEEeeCCCcEEEEEEecccC--CceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC---CEEEEEEccCChhh
Confidence 4567788999999999999884 4499999853 111110 112233322221 33579999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|.|.+.|..+
T Consensus 86 ~G~Y~C~~~n~~~ 98 (250)
T 3esu_F 86 IGTYFCQQGNTLP 98 (250)
T ss_dssp CEEEEEEECSSSS
T ss_pred CEEEEEEEeeCCC
Confidence 9999999999854
No 427
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.73 E-value=2e-07 Score=60.72 Aligned_cols=86 Identities=15% Similarity=0.236 Sum_probs=56.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCC----CCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEccc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPE----PPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~----p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+..+.+.+|+++.|.|.+.+.+. ..+.+.|++.. . .+... ...++....... ...+|.|.++
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v 84 (114)
T 1eeq_A 8 PDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSG---TDFTLTISSL 84 (114)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSC
T ss_pred CCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecC---CEEEEEECCC
Confidence 44678899999999999976531 02479999853 1 12110 112344433221 3457999999
Q ss_pred CCCCCeEEEEEeCCCC----CceEEEEE
Q psy10361 211 RPSDNGKYQCNPANSQ----AKSVMVNV 234 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~~----g~~~~~~v 234 (236)
+.+|+|.|.|.+.+.. |....|.|
T Consensus 85 ~~~DsG~Y~C~~~~~~~~~fg~GT~l~V 112 (114)
T 1eeq_A 85 QAEDVAVYYCQQYYSHPYSFGQGTKLEI 112 (114)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CcccCEEEEEEEeeCCeEEECCCEEEEE
Confidence 9999999999998863 45555555
No 428
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.73 E-value=1.9e-07 Score=63.54 Aligned_cols=85 Identities=18% Similarity=0.271 Sum_probs=57.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|++++|.|.+.+.+ ...+.|++.. ..+... ....+....... ...+|.|.+++.+|
T Consensus 23 p~~v~v~~G~sVtL~C~~s~~~--~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~---~~~sL~I~~v~~~D 97 (146)
T 2yc1_B 23 PATLSVSPGERATLSCRASQSV--RSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSG---TDFTLTISSLEPED 97 (146)
T ss_dssp CSEEEECTTSCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCEEEEecCCCEEEEEEECCCC--CCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCC---CEEEEEECCCCHHH
Confidence 4567889999999999997763 3489999854 122211 012344433221 34679999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEEc
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
+|.|.|.+.+.. |....|.|.
T Consensus 98 sG~Y~C~~~~~~~~~fg~GT~L~V~ 122 (146)
T 2yc1_B 98 FAIYYCQQYRYSPRTFGQGTKVEIK 122 (146)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEEEecCCCCeECCCEEEEEe
Confidence 999999998863 344455553
No 429
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.73 E-value=5.1e-08 Score=63.05 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=50.7
Q ss_pred EEEecCCeEEEEeEEeeCCCCC---CeEEEeecCeE-E-eeec-----------CCCceEEEeecCcceEEEEEEcccCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPP---AYIFWNHNEAI-I-SYDS-----------QRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~---~~v~W~~~~~~-~-~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
+.+..|+++.|.|...+.|.+. ..+.|++.+.. + .... ..++..+..++ .+|.|.+++.
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~sL~I~~v~~ 78 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDS-----WTLRLHNLQI 78 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTT-----TEEEECSCCG
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCC-----EEEEEcCCCh
Confidence 5678899999999997654321 14999997642 1 1100 11233333222 3899999999
Q ss_pred CCCeEEEEEeCCCCC
Q psy10361 213 SDNGKYQCNPANSQA 227 (236)
Q Consensus 213 ~d~G~y~C~a~n~~g 227 (236)
+|+|.|.|.+.+..+
T Consensus 79 ~D~G~Y~C~v~~~~~ 93 (110)
T 1ncn_A 79 KDKGLYQCIIHHKKP 93 (110)
T ss_dssp GGCEEEEEEEEEECS
T ss_pred HHCEEEEEEEEcCCC
Confidence 999999999998876
No 430
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.73 E-value=1.2e-08 Score=73.30 Aligned_cols=68 Identities=15% Similarity=0.217 Sum_probs=49.9
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
..+.+|+++.|.|.+.+.| . .+.|++++..+...... .. ..... ..|.|.++..+|+|.|+|.+.|..
T Consensus 14 ~~v~~G~~v~L~C~~~~~~--~-~~~W~k~g~~~~~~~~~-~~-~~~~~-----~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 14 SVITQGSPVTLRCQGGQET--Q-EYRLYREKKTAPWITRI-PQ-ELVKK-----GQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp SEEETTCCEEEEEECCTTC--C-CEEEEESSSCCHHHHTS-CH-HHHTT-----TEEEESSCCGGGCEEEEEEEEETT
T ss_pred CcccCCCcEEEEEEecCCC--c-EEEEEECCccccccccc-cc-cCCcc-----cEEEECCCCHHHCeEEEEEEECCC
Confidence 4788999999999998763 2 79999998766321110 00 00112 279999999999999999999976
No 431
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.73 E-value=6.3e-08 Score=71.80 Aligned_cols=75 Identities=19% Similarity=0.281 Sum_probs=51.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeee--------cCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYD--------SQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~--------~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
+..+.+.+|+++.|.|.+.+. |.+.+.|++.. .. +... ...++..+.... ....+|.|.+++.
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGT--SNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQ--DRQFILSSKKLLL 83 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESC--SSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEE--TTEEEEEESSCCG
T ss_pred CceEEecCCCCEEEEEEecCC--CCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecC--CCEEEEEECCCCh
Confidence 446788899999999999887 44599999832 11 1110 111233333221 1345899999999
Q ss_pred CCCeEEEEEeCC
Q psy10361 213 SDNGKYQCNPAN 224 (236)
Q Consensus 213 ~d~G~y~C~a~n 224 (236)
+|+|.|.|.+.|
T Consensus 84 ~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 84 SDSGFYLCAWSV 95 (245)
T ss_dssp GGCEEEEEEEEC
T ss_pred hhCEEEEEEEee
Confidence 999999999998
No 432
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.72 E-value=1.4e-07 Score=68.29 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=56.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC---eE--Eeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE---AI--ISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~---~~--~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+....+.+|+++.|.|.+.+. |.+.+.|++.. .. +... ....++...... ...+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 82 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQD--ISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG---RDSSFTISSLESED 82 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSC--CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCEEEecCCCcEEEEEEeCCC--cCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC---CEEEEEECCCCccc
Confidence 446788899999999999887 45699999832 11 1110 012233332211 34589999999999
Q ss_pred CeEEEEEeCCCCC----ceEEEEE
Q psy10361 215 NGKYQCNPANSQA----KSVMVNV 234 (236)
Q Consensus 215 ~G~y~C~a~n~~g----~~~~~~v 234 (236)
+|.|.|.+.|..+ ....|.|
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEE
T ss_pred CEEEEEecccCCceEEcCCceEEE
Confidence 9999999998753 4445544
No 433
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.72 E-value=2.2e-08 Score=74.31 Aligned_cols=78 Identities=23% Similarity=0.427 Sum_probs=53.0
Q ss_pred CCcEEEecCCeEEEEeEEeeC-CCCCCeEEEeecCeEE----eee-----------------------cCCCceEEEeec
Q psy10361 146 GPEVFIENGSTINLTCVVRFS-PEPPAYIFWNHNEAII----SYD-----------------------SQRGGVNVITEK 197 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~-p~p~~~v~W~~~~~~~----~~~-----------------------~~~~~~~~~~~~ 197 (236)
+..+.+.+|+++.|.|.+.+. +.|.+.+.|++++... ... ...++..+...
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~- 87 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL- 87 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT-
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC-
Confidence 346788899999999999871 1255699999986431 110 01112221110
Q ss_pred CcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 198 GETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 198 ~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
...+|.|.+++.+|+|.|.|.+.|..+
T Consensus 88 ---~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 114 (250)
T 2fbo_J 88 ---AAPTLRLTHVHPQDGGRYWCQVAQWSI 114 (250)
T ss_dssp ---TSCCEEECSCCGGGCEEEEEEEECTTC
T ss_pred ---CcceEEEeeCChhhCeEEEEEeccCcc
Confidence 113699999999999999999999876
No 434
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.72 E-value=1.8e-07 Score=61.50 Aligned_cols=79 Identities=14% Similarity=0.338 Sum_probs=52.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEee-e----------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISY-D----------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~-~----------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
++.+.+.+|++++|.|...+.+.....+.|++... .+.. . ...++..+..+. .....+|.|.+
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 85 (120)
T 1n4x_H 7 SGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDT-STSTAFLQINN 85 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEG-GGTEEEEEECS
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeC-CCCEEEEEECC
Confidence 34567889999999999975421234799998531 1111 0 112345544321 22456899999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.+.+.
T Consensus 86 ~~~~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 86 LKNEDTATYFCVRDRH 101 (120)
T ss_dssp CCGGGCEEEEEEEESS
T ss_pred CCHHHCEEEEEEEEcc
Confidence 9999999999999876
No 435
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.72 E-value=7.3e-08 Score=71.15 Aligned_cols=86 Identities=14% Similarity=0.288 Sum_probs=57.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCC--CCCeEEEeecC--eE---Eeee------cCCCceEEEeecCcceEEEEEEcccCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPE--PPAYIFWNHNE--AI---ISYD------SQRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~--p~~~v~W~~~~--~~---~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
+..+.+.+|+++.|.|.+.+.|. +.+.+.|+++. .. +... ....++...... ...+|.|.+++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~ 84 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR---TDFTLIIDPVEA 84 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCG
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC---CeEEEEEcCCCh
Confidence 44678889999999999988740 14589999852 11 1110 012234433221 335799999999
Q ss_pred CCCeEEEEEeCCCCC----ceEEEEE
Q psy10361 213 SDNGKYQCNPANSQA----KSVMVNV 234 (236)
Q Consensus 213 ~d~G~y~C~a~n~~g----~~~~~~v 234 (236)
+|+|.|.|.+.|..+ ..+.|.|
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~~l~V 110 (240)
T 1moe_A 85 DDVATYYCQQTNEDPYTFGGGTKLEI 110 (240)
T ss_dssp GGCEEEEEEECSSSSCCBCCCEEEEE
T ss_pred hhCEEEEEEEccCCceeecCCEEEEE
Confidence 999999999999853 4455555
No 436
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.72 E-value=1.1e-07 Score=69.33 Aligned_cols=79 Identities=16% Similarity=0.355 Sum_probs=53.8
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeeec-------------CCCceEEEeecCcceEEEEEEc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYDS-------------QRGGVNVITEKGETTVSYLLIQ 208 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~~-------------~~~~~~~~~~~~~~~~~~L~i~ 208 (236)
....+.+|+++.|.|.+.+.+.+.+.+.|++++ .. +.... ..++..+..+. .....+|.|.
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~ 86 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDD-SKSSVYLQMN 86 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEG-GGTEEEEEEC
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeC-CCCeEEEEEc
Confidence 346788999999999998764224689999853 11 11100 02344443322 1234589999
Q ss_pred ccCCCCCeEEEEEeCCCC
Q psy10361 209 KARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 209 ~v~~~d~G~y~C~a~n~~ 226 (236)
+++.+|+|.|.|.+.|..
T Consensus 87 ~v~~~D~G~Y~C~~~~~~ 104 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAV 104 (220)
T ss_dssp SCCGGGCEEEEEEEECTT
T ss_pred cCCHHHCEEEEEEEecCC
Confidence 999999999999999974
No 437
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.71 E-value=2e-08 Score=73.45 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=49.7
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEE--EEEEcccCCCCCeEEEEEeCCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVS--YLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
..+.+|++++|.|.+.+ +.+.+.|++++..+..... ... .. .... .|.|.++..+|+|.|+|.+.|..
T Consensus 18 ~~v~~G~~vtL~C~~~~---~~~~~~W~k~g~~~~~~~~--~~~---~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 87 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAIR---EAYLTQLMIIKNSTYREIG--RRL---KF--WNETDPEFVIDHMDANKAGRYQCQYRIGH 87 (218)
T ss_dssp SEEETTCCEEEEECCCT---TCSEEEEEEEETTEEEECS--EEC---C------CCCEEEECSCCGGGCEEEEEEEEETT
T ss_pred CccCCCCCEEEEEEcCC---CCCEEEEEECCCccccccc--ccC---CC--CcceeeEEEEcccccccCEEEEEEEEcCC
Confidence 47889999999999875 3459999999866543211 000 00 0113 69999999999999999999976
Q ss_pred C
Q psy10361 227 A 227 (236)
Q Consensus 227 g 227 (236)
|
T Consensus 88 ~ 88 (218)
T 1uct_A 88 Y 88 (218)
T ss_dssp T
T ss_pred C
Confidence 5
No 438
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.71 E-value=1.9e-07 Score=61.37 Aligned_cols=79 Identities=15% Similarity=0.297 Sum_probs=52.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee-----------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD-----------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
++.+.+.+|+++.|.|...+.+.....+.|++.. . .+... ...++..+..+ ......+|.|.+
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~ 85 (120)
T 1mfa_H 7 SGTVVARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAV-TSTTTAYMELSS 85 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEE-TTTTEEEEEECS
T ss_pred CCCEEEeCCCCEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEe-CCCCEEEEEECC
Confidence 4456788999999999997542123489999742 1 12110 11234554433 223456899999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.+.+.
T Consensus 86 ~~~~Dsg~Y~C~~~~~ 101 (120)
T 1mfa_H 86 LTSEDSAVYYCTRGGH 101 (120)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CCHHHCEEEEEEEecC
Confidence 9999999999998765
No 439
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.71 E-value=6.6e-08 Score=69.16 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=53.3
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecC---------------CCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQ---------------RGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
..+.+.+|+++.|.|.+.+.+ +.+.+.|++++..+..... .++..+. .+ .+|.|.+++
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~-~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~-----~sL~I~~v~ 78 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGE-KVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QS-----YSLQLSNLK 78 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCS-CCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TT-----CCEEECSCC
T ss_pred eEEEEEecCeEEEeccCCCcc-cccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CC-----eEEEECCCC
Confidence 356788999999999986532 4458999998865531110 0122322 22 379999999
Q ss_pred CCCCeEEEEEeCCCCC
Q psy10361 212 PSDNGKYQCNPANSQA 227 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~g 227 (236)
.+|+|.|.|.+.|..+
T Consensus 79 ~~D~G~Y~C~~~~~~~ 94 (193)
T 2if7_A 79 MEDTGSYRAQISTKTS 94 (193)
T ss_dssp GGGCEEEEEEEECSSC
T ss_pred cccCceEEEEEEecCC
Confidence 9999999999999887
No 440
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.71 E-value=1.2e-07 Score=61.29 Aligned_cols=88 Identities=16% Similarity=0.312 Sum_probs=57.5
Q ss_pred CCcEEEecCCeEEEEeE-EeeCCCCCCeEEEeecCeEE---eee------cCCCceEEEeecCcceEEEEEEcccCCCCC
Q psy10361 146 GPEVFIENGSTINLTCV-VRFSPEPPAYIFWNHNEAII---SYD------SQRGGVNVITEKGETTVSYLLIQKARPSDN 215 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~-~~~~p~p~~~v~W~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 215 (236)
+..+.+.+|+++.|.|. ..+.+ +...+.|++..... ... ...++.....+ ......+|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~-~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~Ds 84 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNI-ASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSID-RSSNSASLTISGLKTEDE 84 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCG-GGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEE-TTTTEEEEEECSCCGGGC
T ss_pred CCCEEEcCCCCEEEEEEeCCCCC-CCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEec-cCCCEEEEEECCCChhhC
Confidence 45678899999999999 76543 13589999876211 110 01234444321 222456899999999999
Q ss_pred eEEEEEeCCCC----CceEEEEEc
Q psy10361 216 GKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 216 G~y~C~a~n~~----g~~~~~~v~ 235 (236)
|.|.|.+.+.. |....|.|.
T Consensus 85 G~Y~C~~~~~~~~~fg~GT~l~V~ 108 (109)
T 1pew_A 85 ADYYCQSYDARNVVFGGGTRLTVL 108 (109)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEEeCCceEECCCEEEEEe
Confidence 99999998753 455566554
No 441
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.70 E-value=2.6e-07 Score=60.87 Aligned_cols=78 Identities=17% Similarity=0.335 Sum_probs=52.1
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC----e-EEeeec----------CCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE----A-IISYDS----------QRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~----~-~~~~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
+.+.+.+|+++.|.|...+.+.....+.|++.. . .+.... ..++..+..+ ......+|.|.+++
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~ 86 (121)
T 1kxv_C 8 GGGTVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQG-NAKNTAYLQMDSLK 86 (121)
T ss_dssp CCEEECTTCCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEEC-SSTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEE-CCCCEEEEEECCCC
Confidence 356788999999999997643223579999853 1 121111 1234444332 12345689999999
Q ss_pred CCCCeEEEEEeCCC
Q psy10361 212 PSDNGKYQCNPANS 225 (236)
Q Consensus 212 ~~d~G~y~C~a~n~ 225 (236)
.+|+|.|.|.+.+.
T Consensus 87 ~~Dsg~Y~C~~~~~ 100 (121)
T 1kxv_C 87 PDDTAMYYCKPSLR 100 (121)
T ss_dssp GGGCEEEEEEEEES
T ss_pred HHHCEEEEEEEEec
Confidence 99999999998764
No 442
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.70 E-value=9e-08 Score=71.36 Aligned_cols=89 Identities=16% Similarity=0.367 Sum_probs=58.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEEee--------------ecCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAIISY--------------DSQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+..+.+.+|+++.|.|.+.+.+.+.+.+.|++. +..+.. .....+..+..+. .....+|.|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~ 86 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADT-SSNTAYLHLSS 86 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEET-TTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeec-CCCeEEEEeCC
Confidence 445778899999999999875434568999983 211100 0112344433222 22345799999
Q ss_pred cCCCCCeEEEEEeCCCCC----ceEEEEEc
Q psy10361 210 ARPSDNGKYQCNPANSQA----KSVMVNVL 235 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~g----~~~~~~v~ 235 (236)
++.+|+|.|.|.+.|..+ ....|.|.
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~ 116 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVS 116 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEEC
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEe
Confidence 999999999999999643 34455543
No 443
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.70 E-value=1.1e-08 Score=73.31 Aligned_cols=75 Identities=25% Similarity=0.358 Sum_probs=55.6
Q ss_pred CCcEEEecCCeEEEEeE-EeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCC
Q psy10361 146 GPEVFIENGSTINLTCV-VRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPAN 224 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~-~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n 224 (236)
+....+.+|+.+.|.|. +.+.|. .+.+.|++++..+... ...+......++ .|.|.++..+|+|.|+|.+.|
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~-~~~v~W~~~~~~~~~~-~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPD-DLSYRWLLNEFPVFIT-MDKRRFVSQTNG-----NLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESS-CCEEEEEESSTTCBCC-CSSSEEECTTTC-----CEEESSCCGGGCEEEEEEEEE
T ss_pred CceEEEECCCCEEEeccccccCCC-ceEEEEEECCceeeee-eCCCeEEEcCCC-----eEEECcCCcccCeEEEEEEEe
Confidence 45678999999999999 777743 1699999998766421 112222222232 699999999999999999999
Q ss_pred CCC
Q psy10361 225 SQA 227 (236)
Q Consensus 225 ~~g 227 (236)
..+
T Consensus 88 ~~~ 90 (201)
T 3s97_C 88 PSI 90 (201)
T ss_dssp GGG
T ss_pred cCC
Confidence 764
No 444
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.70 E-value=1.6e-07 Score=66.51 Aligned_cols=118 Identities=10% Similarity=0.209 Sum_probs=76.3
Q ss_pred EEEEEcCCCCCCCEEEEEEeecCC-CceeEEEEEEEEEEeeCCcccccCCCcccccCCCcEEEecCCeEEEEeEEee-CC
Q psy10361 90 WTLQLKYPQHKDTGIYECQVSTTP-HQAHYIYLTVVVLVINDGKYLLVPEPETDIIGGPEVFIENGSTINLTCVVRF-SP 167 (236)
Q Consensus 90 ~~L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p 167 (236)
..|.|.+++ |.|.|.|.+.-.. .....+.|+|. .++..+.+.. ....+.+|++++|.|.+.+ .|
T Consensus 52 ~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy-----------~~P~~v~i~~-~p~~~~~G~~~tL~C~v~~v~P 117 (192)
T 1zxq_A 52 KHYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVY-----------QPPRQVILTL-QPTLVAVGKSFTIECRVPTVEP 117 (192)
T ss_dssp EEEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEEC-----------BCCCCCEEEE-ESSEECTTSEEEEEEEECSCBC
T ss_pred EEEEEeccc--cCCeeEEEEECCCcceEEEEEEEEE-----------eCCCCceEcc-CCccccCCCcEEEEEEeCCeEC
Confidence 469999999 7899999998764 34477778887 3333333331 1236789999999999975 44
Q ss_pred CCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCe-EEEEEeCCCC
Q psy10361 168 EPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNG-KYQCNPANSQ 226 (236)
Q Consensus 168 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~y~C~a~n~~ 226 (236)
.+...+.|++++..+....-... .........++ ...++++|.| .|+|.|.-.+
T Consensus 118 ~~~L~v~llrG~~~l~~~~f~~~----~~~~~~~tv~~-~~~~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 118 LDSLTLFLFRGNETLHYETFGKA----APAPQEATATF-NSTADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp GGGEEEEEEETTEEEEEEECCSS----TTCTTCEEEEE-EEECCGGGGGCEEEEEEEEEC
T ss_pred CCCcEEEEEcCCEEeeecccccc----cCcCcceEEEE-EEecchhhCCceEEEEEEecC
Confidence 33334899999988853211100 01111122222 3346677777 9999999887
No 445
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.70 E-value=2.7e-07 Score=60.97 Aligned_cols=87 Identities=20% Similarity=0.315 Sum_probs=57.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|++++|.|...+.+.....+.|++.. . .+... ...++...... ....+|.|.+++.+|
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~---~~~~sL~I~~l~~~D 83 (123)
T 3t0v_A 7 SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKS---GTSASLAISGLRSED 83 (123)
T ss_dssp CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE---TTEEEEEECSCCGGG
T ss_pred cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEcc---CCEEEEEECCCCHHH
Confidence 5567889999999999997653223589999842 1 12110 01234433321 245689999999999
Q ss_pred CeEEEEEeCCCC------CceEEEEEc
Q psy10361 215 NGKYQCNPANSQ------AKSVMVNVL 235 (236)
Q Consensus 215 ~G~y~C~a~n~~------g~~~~~~v~ 235 (236)
+|.|.|.+.+.. |....|.|.
T Consensus 84 sG~Y~C~~~~~~~~~~~fG~GT~l~V~ 110 (123)
T 3t0v_A 84 EADYYCLSWDDSLNGWVFGGGTKVTVL 110 (123)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEC
T ss_pred CEEEEEEEEcCCCCceEECCCEEEEEc
Confidence 999999987653 455555554
No 446
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.70 E-value=1.1e-07 Score=69.01 Aligned_cols=76 Identities=18% Similarity=0.300 Sum_probs=52.2
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eee----------ecCCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISY----------DSQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~----------~~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
....+.+|+++.|.|.+.+.+.+.+.+.|++.. .. +.. ....++..+... ....+|.|.+++
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~ 83 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKT---STTVDLKITSPT 83 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEEC---SSEEEEEESSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEee---CCEEEEEECCCC
Confidence 346788999999999998754345689999742 11 100 011234443331 244679999999
Q ss_pred CCCCeEEEEEeCCC
Q psy10361 212 PSDNGKYQCNPANS 225 (236)
Q Consensus 212 ~~d~G~y~C~a~n~ 225 (236)
.+|+|.|.|.+.|.
T Consensus 84 ~~D~G~Y~C~~~~~ 97 (215)
T 3nl4_H 84 TEDTATYFCVRKYG 97 (215)
T ss_dssp GGGCEEEEEEEECS
T ss_pred cccCEEEEEEEecC
Confidence 99999999999987
No 447
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.69 E-value=8.8e-08 Score=71.56 Aligned_cols=89 Identities=13% Similarity=0.288 Sum_probs=58.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE--e-e-----------ecCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII--S-Y-----------DSQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~--~-~-----------~~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
++...+.+|+++.|.|.+.+.+.+.+.+.|++.. ..+ . . ....++..+..+. .....+|.|.+
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~ 87 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDK-SSSTAYLELRS 87 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEG-GGTEEEEEECS
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEec-CCCEEEEEECC
Confidence 3446788999999999998864234689999742 111 0 0 0112344433221 22345799999
Q ss_pred cCCCCCeEEEEEeCCC-------CCceEEEEEc
Q psy10361 210 ARPSDNGKYQCNPANS-------QAKSVMVNVL 235 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~-------~g~~~~~~v~ 235 (236)
++.+|+|.|.|.+.|. .+..+.|.|.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~ 120 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVS 120 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEEC
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEc
Confidence 9999999999999998 2345556554
No 448
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.69 E-value=2.3e-07 Score=60.64 Aligned_cols=86 Identities=10% Similarity=0.249 Sum_probs=55.7
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeeec----------CCCceEEEeecCcceEEEEEEcccCC
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYDS----------QRGGVNVITEKGETTVSYLLIQKARP 212 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~~ 212 (236)
.+.+.+|++++|.|...+.+.....+.|++.. ..+.... ..++.....+ ......+|.|.+++.
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~ 87 (116)
T 1a2y_B 9 PGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKD-NSKSQVFLKMNSLHT 87 (116)
T ss_dssp CSEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEE-GGGTEEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEE-CCCCEEEEEECCCCH
Confidence 35778999999999998653223589999853 1121111 1234444332 122456899999999
Q ss_pred CCCeEEEEEeCCCC-----CceEEEEE
Q psy10361 213 SDNGKYQCNPANSQ-----AKSVMVNV 234 (236)
Q Consensus 213 ~d~G~y~C~a~n~~-----g~~~~~~v 234 (236)
+|+|.|.|.+.+.. |....|.|
T Consensus 88 ~Dsg~Y~C~~~~~~~~~~fg~GT~l~V 114 (116)
T 1a2y_B 88 DDTARYYCARERDYRLDYWGQGTTLTV 114 (116)
T ss_dssp GGCEEEEEEEESSSSEEEECCCEEEEE
T ss_pred HHCEEEEEEEecCCCceEECCCEEEEE
Confidence 99999999998752 34445554
No 449
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.69 E-value=1.6e-07 Score=71.22 Aligned_cols=82 Identities=16% Similarity=0.384 Sum_probs=55.9
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---eee-----------cCCCceEEEeecCcceEEEEEEc
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SYD-----------SQRGGVNVITEKGETTVSYLLIQ 208 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~~-----------~~~~~~~~~~~~~~~~~~~L~i~ 208 (236)
.+....+.+|+++.|.|.+.+.+.+.+.+.|++++ ..+ ... ....+..+..+. .....+|.|.
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~ 110 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDT-SSNTAYLQLS 110 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEET-TTTEEEEEEC
T ss_pred CCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEec-CCCeEEEEEC
Confidence 35567889999999999998874334689999864 111 110 012344433221 1234689999
Q ss_pred ccCCCCCeEEEEEeCCCCC
Q psy10361 209 KARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 209 ~v~~~d~G~y~C~a~n~~g 227 (236)
+++.+|+|.|.|.+.|..|
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp SCCGGGCEEEEEEEECSSS
T ss_pred cCChhhCEEEEEEeccCCC
Confidence 9999999999999999864
No 450
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.69 E-value=1.8e-07 Score=68.64 Aligned_cols=89 Identities=13% Similarity=0.269 Sum_probs=58.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeeec-----------CCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYDS-----------QRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+....+.+|+++.|.|.+.+.+...+.+.|++.. .. +.... ..++..+..+. .....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~ 85 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDT-SSSTAYMQLSS 85 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEET-TTTEEEEEECS
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeC-CCCeEEEEECC
Confidence 4456788999999999998764214589999863 21 11000 12344443322 12346899999
Q ss_pred cCCCCCeEEEEEeCCCC----CceEEEEEc
Q psy10361 210 ARPSDNGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
++.+|+|.|.|.+.|.. |....|.|.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~ 115 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVS 115 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEc
Confidence 99999999999998863 344455553
No 451
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.68 E-value=6.8e-08 Score=64.26 Aligned_cols=79 Identities=22% Similarity=0.393 Sum_probs=50.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe---EEeeecCC---CceEEEee--cCcceEEEEEEcccCCCCCeE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA---IISYDSQR---GGVNVITE--KGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~ 217 (236)
+..+.+.+|++++|.|.+.+.. |.+.+.|++... .+...... .+...... .......+|.|.+++.+|+|.
T Consensus 10 p~~~~v~~G~~vtL~C~~~~~~-~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 88 (127)
T 2jju_A 10 EKSVSVAAGESATLRCAMTSLI-PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGT 88 (127)
T ss_dssp CSEEEEETTSCEEECCEESCCC-SCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEE
T ss_pred CCeEEEeCCCCEEEEEEEeCCC-CCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEE
Confidence 4567889999999999997641 335899999752 12111110 12221100 000123579999999999999
Q ss_pred EEEEeCCC
Q psy10361 218 YQCNPANS 225 (236)
Q Consensus 218 y~C~a~n~ 225 (236)
|.|.+.|.
T Consensus 89 Y~C~~~~~ 96 (127)
T 2jju_A 89 YYCVKFRK 96 (127)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99998874
No 452
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.68 E-value=3e-07 Score=60.54 Aligned_cols=79 Identities=18% Similarity=0.422 Sum_probs=52.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e-E--Eeeec-----------CCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A-I--ISYDS-----------QRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~-~--~~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+..+.+.+|+++.|.|...+.+.....+.|++.. . . +.... ..++..+..+. .....+|.|.+
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 85 (121)
T 1j05_H 7 SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADT-SSNTAYLQLTS 85 (121)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEG-GGTEEEEEECS
T ss_pred CCCEEEeCCCcEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcC-CCCEEEEEECC
Confidence 3456788999999999997643223589999853 1 1 11100 12344443321 22456899999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.+.+.
T Consensus 86 ~~~~Dsg~Y~C~~~~~ 101 (121)
T 1j05_H 86 LTSEDTAVYYCAPFGY 101 (121)
T ss_dssp CCGGGCEEEEEEEEBT
T ss_pred CCHHHCEEEEEEEEcC
Confidence 9999999999998765
No 453
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.67 E-value=1.7e-07 Score=68.31 Aligned_cols=88 Identities=15% Similarity=0.327 Sum_probs=57.4
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeee-------------cCCCceEEEeecCcceEEEEEEc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYD-------------SQRGGVNVITEKGETTVSYLLIQ 208 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~-------------~~~~~~~~~~~~~~~~~~~L~i~ 208 (236)
..+.+.+|+++.|.|.+.+.+.+...+.|++.. .. +... ...++..+..+. .....+|.|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~ 86 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDD-SKNTAFLQMN 86 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEG-GGTEEEEEEC
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecC-CCCEEEEEEC
Confidence 346788999999999998753334689999743 11 1000 112344443322 2245679999
Q ss_pred ccCCCCCeEEEEEeCCCC-----CceEEEEEc
Q psy10361 209 KARPSDNGKYQCNPANSQ-----AKSVMVNVL 235 (236)
Q Consensus 209 ~v~~~d~G~y~C~a~n~~-----g~~~~~~v~ 235 (236)
+++.+|+|.|.|.+.+.. +....|.|.
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVS 118 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEEC
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEe
Confidence 999999999999998753 444555553
No 454
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.67 E-value=3.9e-08 Score=69.73 Aligned_cols=76 Identities=18% Similarity=0.257 Sum_probs=54.0
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEee--cCeEEeee-------cCCCceEEEeecCcceEEEEEEcccCCCCCeE
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNH--NEAIISYD-------SQRGGVNVITEKGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 217 (236)
..+....|+++.|.|.......+.+.+.|++ ++..+... ...++..+. .++ +|.|.+++.+|+|.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~-~ng-----sL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF-KNG-----TLKIKHLKTDDQDI 80 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC-TTS-----CEEECSCCGGGCEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC-CCC-----CEEECCCChhhCEE
Confidence 3466788999999995432112456899999 88766321 112344443 333 79999999999999
Q ss_pred EEEEeCCCCCc
Q psy10361 218 YQCNPANSQAK 228 (236)
Q Consensus 218 y~C~a~n~~g~ 228 (236)
|.|.+.|..|.
T Consensus 81 Y~c~~~n~~g~ 91 (182)
T 1hnf_A 81 YKVSIYDTKGK 91 (182)
T ss_dssp EEEEEEETTSC
T ss_pred EEEEEEeCCCc
Confidence 99999998873
No 455
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.67 E-value=2.3e-07 Score=68.75 Aligned_cols=76 Identities=17% Similarity=0.207 Sum_probs=53.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.| .+.+.|+++. . .+... ....+....... ...+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 82 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSI--GNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG---TDFTLSINSVETED 82 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCeEEEcCCCcEEEEEEeCCCC--CceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC---CEEEEEECCCChHH
Confidence 4467888999999999998874 4599999853 1 11110 012234433221 33579999999999
Q ss_pred CeEEEEEeCCCC
Q psy10361 215 NGKYQCNPANSQ 226 (236)
Q Consensus 215 ~G~y~C~a~n~~ 226 (236)
+|.|.|.+.|..
T Consensus 83 ~G~Y~C~~~n~~ 94 (242)
T 2znx_A 83 FGMYFCQQSNSX 94 (242)
T ss_dssp CEEEEEEECSSS
T ss_pred CEEEEEeEecCC
Confidence 999999999985
No 456
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.67 E-value=2.5e-08 Score=71.74 Aligned_cols=69 Identities=12% Similarity=0.170 Sum_probs=48.3
Q ss_pred EEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANS 225 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~ 225 (236)
..+.+|++++|.|.+.+ |.+.+.|++++..+....... .. ........|.|.+++.+|+|.|+|.+.|.
T Consensus 17 ~~v~~G~~v~L~C~~~~---~~~~~~w~k~g~~~~~~~~~~--~~---~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~ 85 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV---MFEHFLLHREGMFNDTLRLIG--EH---HDGVSKANFSISRMTQDLAGTYRCYGSVT 85 (201)
T ss_dssp SEEETTCCEEEEEEESS---CCSEEEEEEESSSCEEEEEEC--EE---ETTEEEEEEEESSCCGGGCEEEEEEEEBT
T ss_pred CccCCCCcEEEEEeccC---CCCEEEEEECCCcCCcceeee--ec---CCCCceEEEEeccCCcccCeEEEEeEecC
Confidence 56789999999999963 445999999986553211000 00 00112357999999999999999999653
No 457
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.67 E-value=4.3e-07 Score=59.25 Aligned_cols=88 Identities=20% Similarity=0.358 Sum_probs=56.6
Q ss_pred CcEEEecCCeEEEEeEEeeCC-CCCCeEEEeecC-----eEEee--------e--cCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSP-EPPAYIFWNHNE-----AIISY--------D--SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p-~p~~~v~W~~~~-----~~~~~--------~--~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+.+.+.+|+++.|.|...... .+...+.|++.. ..+.. . ...++.....+. .....+|+|.++
T Consensus 6 ~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~~ 84 (116)
T 3bj9_1 6 PAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDV-ARNRGYLSISEL 84 (116)
T ss_dssp SEEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEG-GGTEEEEEECSC
T ss_pred CcEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecC-CCceEEEEECCC
Confidence 357888999999999996431 123479999843 11211 0 012344433222 123458999999
Q ss_pred CCCCCeEEEEEeCCCC----CceEEEEEc
Q psy10361 211 RPSDNGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
+.+|+|.|.|.+.+.. |....|.|.
T Consensus 85 ~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~ 113 (116)
T 3bj9_1 85 QPEDEAMYYCAMGARSTHVFGSGTQLTVL 113 (116)
T ss_dssp CGGGCEEEEEEECCSSCCEECCCEEEEEE
T ss_pred ChhHCEEEEEEEeCCCCcEECCCEEEEEe
Confidence 9999999999998763 455566654
No 458
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.67 E-value=6.2e-07 Score=58.22 Aligned_cols=87 Identities=15% Similarity=0.256 Sum_probs=57.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCC---CCCeEEEeecC--e---EEeee------cCCCceEEEeecCcceEEEEEEcccC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPE---PPAYIFWNHNE--A---IISYD------SQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~---p~~~v~W~~~~--~---~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
+..+.+.+|+++.|.|.+.+.+. ....+.|++.. . .+... ...++....... ...+|.|.+++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~ 84 (113)
T 1dlf_L 8 PLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG---TDFTLKISRVE 84 (113)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEECSCC
T ss_pred CCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccC---CEEEEEECCCC
Confidence 44678899999999999976531 13579999853 1 12110 112344433221 34579999999
Q ss_pred CCCCeEEEEEeCCCC----CceEEEEEc
Q psy10361 212 PSDNGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
.+|+|.|.|.+.+.. |....|.|.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~fg~gT~l~V~ 112 (113)
T 1dlf_L 85 AEDLGVYFCSQSTHVPFTFGSGTKLEIK 112 (113)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred hHHCEEEEEEEecCCCcEECCCEEEEEc
Confidence 999999999998863 455555553
No 459
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.66 E-value=1.9e-07 Score=68.16 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=53.7
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee-----------cCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD-----------SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
....+.+|+++.|.|.+.+.+...+.+.|++.. . .+... ...++..+..+ ......+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v 86 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRD-NAKNSLYLQMSKV 86 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEC-SSSCEEEEEECSC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEee-CCCCEEEEEECCC
Confidence 346788999999999998764224589999853 1 11111 11234554432 1224468999999
Q ss_pred CCCCCeEEEEEeCCCC
Q psy10361 211 RPSDNGKYQCNPANSQ 226 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~~ 226 (236)
+.+|+|.|.|.+.|..
T Consensus 87 ~~~DsG~Y~C~~~~~~ 102 (220)
T 2fbj_H 87 RSEDTALYYCARLHYY 102 (220)
T ss_dssp CGGGCEEEEEEEEETT
T ss_pred ChhhCEEEEEEEeccc
Confidence 9999999999998863
No 460
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.66 E-value=1.6e-07 Score=68.25 Aligned_cols=88 Identities=18% Similarity=0.292 Sum_probs=57.6
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eE---Eeeec----------CCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AI---ISYDS----------QRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~---~~~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
....+.+|+++.|.|.+.+.+.+.+.+.|++.. .. +.... ..++..+..+. .....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDT-SKSQVFLKMNSLQ 86 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEET-TTTEEEEEESSCC
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeC-CCceEEEEECCCC
Confidence 345778999999999998764234589999853 11 11100 12344443322 1234689999999
Q ss_pred CCCCeEEEEEeCCCC------CceEEEEEc
Q psy10361 212 PSDNGKYQCNPANSQ------AKSVMVNVL 235 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~------g~~~~~~v~ 235 (236)
.+|+|.|.|.+.|.. +..+.|.|.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~ 116 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVS 116 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEEC
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEec
Confidence 999999999999863 344556553
No 461
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.66 E-value=2.1e-07 Score=68.96 Aligned_cols=74 Identities=19% Similarity=0.321 Sum_probs=50.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--------------CeEEeeecCC-CceEEEeecCcceEEEEEEccc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--------------EAIISYDSQR-GGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+..+.+.+|+++.|.| ..+. +.+.+.|++. +......... .++.+.... ....+|.|.++
T Consensus 9 p~~v~v~~G~~v~L~C-~~~~--~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~sL~I~~v 83 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DPVS--NHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPD--GSYFTLKIQPT 83 (245)
T ss_dssp CSEEEEETTCCEEEEE-ECCT--TCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCT--TSCEEEEECSC
T ss_pred CceEEecCCCCEEEEE-EcCC--CCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEecc--CceEEEEECCC
Confidence 4467889999999999 5455 4559999982 2111111111 344443321 23468999999
Q ss_pred CCCCCeEEEEEeCC
Q psy10361 211 RPSDNGKYQCNPAN 224 (236)
Q Consensus 211 ~~~d~G~y~C~a~n 224 (236)
+.+|+|.|.|.+.+
T Consensus 84 ~~~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 84 ALEDSAVYFCASSF 97 (245)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CHhHCEEEEEEEcc
Confidence 99999999999985
No 462
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.66 E-value=4.7e-08 Score=62.96 Aligned_cols=85 Identities=14% Similarity=0.224 Sum_probs=53.0
Q ss_pred EEEecCCeEEEEeEEeeCCCC-CCeEEEeecCeE-------Eeee-c------CCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 149 VFIENGSTINLTCVVRFSPEP-PAYIFWNHNEAI-------ISYD-S------QRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 149 ~~~~~g~~~~l~C~~~~~p~p-~~~v~W~~~~~~-------~~~~-~------~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
+.+..|+++.|.|...+.+.+ ...+.|++.... +... . ..+++.+... ......+|.|.+++.+
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~~~ 82 (109)
T 2oyp_A 4 YKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGD-LNKGDVSLIIKNVTLD 82 (109)
T ss_dssp EEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSC-GGGTBCCEEECSCCGG
T ss_pred EEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccC-ccCCcEeEEEccCCCh
Confidence 567789999999998765322 235999986521 1110 0 1122222111 1112347999999999
Q ss_pred CCeEEEEEeCCCCC---ceEEEEE
Q psy10361 214 DNGKYQCNPANSQA---KSVMVNV 234 (236)
Q Consensus 214 d~G~y~C~a~n~~g---~~~~~~v 234 (236)
|+|.|.|.+.+..+ ..+.|.|
T Consensus 83 D~G~Y~C~v~~~~~~~~~~~~l~V 106 (109)
T 2oyp_A 83 DHGTYCCRIQFPGLMNDKKLELKL 106 (109)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEEE
T ss_pred hCeEEEEEEEcCCcccceEEEEEE
Confidence 99999999999864 3444444
No 463
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.66 E-value=2.1e-07 Score=68.12 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=53.9
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---eee-----------cCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SYD-----------SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
....+.+|+++.|.|.+.+.+...+.+.|++.. ..+ ... ...++..+..+. .....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~v 86 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDD-LEDFVYLQMHKM 86 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEET-TTTEEEEEECSC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecC-CCCEEEEEECCC
Confidence 346788999999999998764224589999853 211 110 112344444321 123468999999
Q ss_pred CCCCCeEEEEEeCCCC
Q psy10361 211 RPSDNGKYQCNPANSQ 226 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~~ 226 (236)
+.+|+|.|.|.+.|..
T Consensus 87 ~~~D~G~Y~C~~~~~~ 102 (225)
T 1op3_H 87 RVEDTAIYYCARKGSD 102 (225)
T ss_dssp CGGGCEEEEEEEECCS
T ss_pred ChhhCEEEEEEEecCC
Confidence 9999999999999875
No 464
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.66 E-value=8.6e-08 Score=64.31 Aligned_cols=77 Identities=23% Similarity=0.427 Sum_probs=51.0
Q ss_pred CCcEEEecCCeEEEEeEEee-CCCCCCeEEEeecCeE-----Eee----------------------ecCCCceEEEeec
Q psy10361 146 GPEVFIENGSTINLTCVVRF-SPEPPAYIFWNHNEAI-----ISY----------------------DSQRGGVNVITEK 197 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~-~p~p~~~v~W~~~~~~-----~~~----------------------~~~~~~~~~~~~~ 197 (236)
+..+.+..|+++.|.|.... ...+.+.+.|++.... +.. ....++..+.. .
T Consensus 11 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~-~ 89 (135)
T 1xt5_A 11 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-L 89 (135)
T ss_dssp CSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC-T
T ss_pred CceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec-C
Confidence 34578889999999999864 2124568999986532 110 00012233211 1
Q ss_pred CcceEEEEEEcccCCCCCeEEEEEeCCCC
Q psy10361 198 GETTVSYLLIQKARPSDNGKYQCNPANSQ 226 (236)
Q Consensus 198 ~~~~~~~L~i~~v~~~d~G~y~C~a~n~~ 226 (236)
...+|.|.+++.+|+|.|.|.+.+..
T Consensus 90 ---~~~sL~I~~v~~~D~G~Y~C~v~~~~ 115 (135)
T 1xt5_A 90 ---AAPTLRLTHVHPQDGGRYWCQVAQWS 115 (135)
T ss_dssp ---TSCCEEECSCCGGGCEEEEEEEECSS
T ss_pred ---CCCeEEECCCChhhCcEEEEEEEcCC
Confidence 12479999999999999999999864
No 465
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.66 E-value=3.9e-07 Score=60.29 Aligned_cols=78 Identities=21% Similarity=0.371 Sum_probs=52.4
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeeec----------CCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYDS----------QRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
..+.+.+|++++|.|...+.+.....+.|++.. ..+.... ..++..+..+. .....+|.|.+++
T Consensus 8 ~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~-~~~~~~L~I~~~~ 86 (124)
T 1yc7_A 8 GGGSVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDN-AKNTVYLQMNSLQ 86 (124)
T ss_dssp CCEEECTTCCEEEEEEEESCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEET-TTTEEEEEECSCC
T ss_pred CCEEEecCCCEEEEEEEeCCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEEC-CCCEEEEEECCCC
Confidence 356788999999999997643223579999853 1111101 12344444332 2245679999999
Q ss_pred CCCCeEEEEEeCCC
Q psy10361 212 PSDNGKYQCNPANS 225 (236)
Q Consensus 212 ~~d~G~y~C~a~n~ 225 (236)
.+|+|.|.|.+.+.
T Consensus 87 ~~Dsg~Y~C~~~~~ 100 (124)
T 1yc7_A 87 REDTGMYYCQIQCG 100 (124)
T ss_dssp GGGCEEEEEEEEEC
T ss_pred HHHCEEEEEEEEeC
Confidence 99999999998875
No 466
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.65 E-value=2.1e-07 Score=70.40 Aligned_cols=76 Identities=16% Similarity=0.288 Sum_probs=53.6
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+..+.+.+|+++.|.|.+.+.| .+.+.|++++. .+... ....++...... ...+|.|.+++.+|
T Consensus 19 p~~~~v~~G~~v~L~C~~~~~p--~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 93 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRASQDV--STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG---TDFTLTISSLQPED 93 (276)
T ss_dssp CSEEECCTTCCEEEEEEESSCC--TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCeEEEcCCCCEEEEeEcCCCC--CCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccC---CeEEEEEccCChhh
Confidence 4567788999999999998874 45899998642 12110 012233333221 33579999999999
Q ss_pred CeEEEEEeCCCC
Q psy10361 215 NGKYQCNPANSQ 226 (236)
Q Consensus 215 ~G~y~C~a~n~~ 226 (236)
+|.|.|.+.|..
T Consensus 94 sG~Y~C~~~n~~ 105 (276)
T 3auv_A 94 FATYYCQQHYTT 105 (276)
T ss_dssp CEEEEEEECSSS
T ss_pred CEEEEEEEecCC
Confidence 999999999974
No 467
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.65 E-value=2.6e-07 Score=66.74 Aligned_cols=73 Identities=14% Similarity=0.264 Sum_probs=50.7
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeEE---eee------cCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAII---SYD------SQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~~---~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
...+.+|+++.|.|.+. |.+.+.|+++ +... ... ....+....... ...+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D~G 81 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT----SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSG---NTASLTVSGLQTDDEA 81 (211)
T ss_dssp EEEECTTCEEEEEEECC----CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET---TEEEEEEESCCGGGCE
T ss_pred eEEEcCCCCEEEEEEEC----CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccC---CEEEEEECCCChhHCE
Confidence 67888999999999997 3359999984 2111 100 011233332221 3457999999999999
Q ss_pred EEEEEeCCCCC
Q psy10361 217 KYQCNPANSQA 227 (236)
Q Consensus 217 ~y~C~a~n~~g 227 (236)
.|.|.+.|..|
T Consensus 82 ~Y~C~~~~~~~ 92 (211)
T 3tv3_L 82 VYYCGSLVGNW 92 (211)
T ss_dssp EEEEEEEETTT
T ss_pred EEEEEEecCCC
Confidence 99999999765
No 468
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.65 E-value=7.3e-08 Score=69.62 Aligned_cols=65 Identities=20% Similarity=0.409 Sum_probs=49.3
Q ss_pred ecCCeEEEEeEEeeCCCCCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCceEE
Q psy10361 152 ENGSTINLTCVVRFSPEPPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAKSVM 231 (236)
Q Consensus 152 ~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~~~~ 231 (236)
.+|+++.|.|.+ | .+.+.|++++..+.... ... .+|.|.++..+|+|.|+|.+.+..+..+.
T Consensus 16 ~~G~~v~L~C~~---p--~~~i~W~k~g~~l~~~~--------~~~-----~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~ 77 (204)
T 1sy6_A 16 QEDGSVLLTCDA---E--AKNITWFKDGKMIGFLT--------EDK-----KKWNLGSNAKDPRGMYQCKGSQNKSKPLQ 77 (204)
T ss_dssp CSSSEEEEEECS---C--SSEEEEEETTEEEEEEE--------SSC-----CCEEEEEGGGCCEEEEEEESSSSCCCCEE
T ss_pred cCCCeEEEEEcC---C--CCEEEEEECCEECCCCC--------CCC-----CeEEeCCCCcCCCEEEEEEecCCCCeeEE
Confidence 579999999988 3 34999999998875321 111 26999999999999999998876655555
Q ss_pred EEE
Q psy10361 232 VNV 234 (236)
Q Consensus 232 ~~v 234 (236)
|.|
T Consensus 78 v~v 80 (204)
T 1sy6_A 78 VYY 80 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 469
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.65 E-value=2e-07 Score=61.44 Aligned_cols=89 Identities=21% Similarity=0.341 Sum_probs=54.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCC--CCCCeEEEeecCe----E--Ee-ee----------cCCCceEEEeecCcceEEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSP--EPPAYIFWNHNEA----I--IS-YD----------SQRGGVNVITEKGETTVSYLL 206 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p--~p~~~v~W~~~~~----~--~~-~~----------~~~~~~~~~~~~~~~~~~~L~ 206 (236)
+..+.+..|+++.|.|.....+ .+...+.|++.+. . +. .. ...+++.+... ......+|.
T Consensus 6 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~ 84 (124)
T 1neu_A 6 DREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGD-PSWKDGSIV 84 (124)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCB-GGGTBCCEE
T ss_pred CCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecC-CcCCeEEEE
Confidence 4467888999999999986431 1345899998542 1 11 10 00233333211 011224799
Q ss_pred EcccCCCCCeEEEEEeCCCCCc-----eEEEEEc
Q psy10361 207 IQKARPSDNGKYQCNPANSQAK-----SVMVNVL 235 (236)
Q Consensus 207 i~~v~~~d~G~y~C~a~n~~g~-----~~~~~v~ 235 (236)
|.+++.+|+|.|.|.+.+..+. .+.|.|.
T Consensus 85 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~ 118 (124)
T 1neu_A 85 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF 118 (124)
T ss_dssp ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEE
T ss_pred EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEe
Confidence 9999999999999999988652 3455554
No 470
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.65 E-value=1.1e-08 Score=75.89 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=48.7
Q ss_pred EecCCeEEEEeEEeeCC-CC-CCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCC
Q psy10361 151 IENGSTINLTCVVRFSP-EP-PAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQA 227 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~p-~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g 227 (236)
+..|+.+.|.|.+.+.+ .| ...+.|++++..+.... ........+......+.|.|.....+|.|.|+|.|.|..+
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~ 113 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK-TKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKAL 113 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCE-ECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC--
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCce-eccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCC
Confidence 44689999999999873 12 45899999998874311 0011111122223446788877777789999999999886
No 471
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=98.65 E-value=6.3e-07 Score=59.14 Aligned_cols=78 Identities=18% Similarity=0.386 Sum_probs=52.4
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee-c----------CCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD-S----------QRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~-~----------~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+.+.+.+|+++.|.|...+.+.....+.|++.. . .+... . ..++..+..+. .....+|.|.++
T Consensus 10 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~ 88 (123)
T 2p45_B 10 GGGLVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDK-GKNTVYLQMDSL 88 (123)
T ss_dssp CCEEEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCT-TSSEEEEEESSC
T ss_pred CCEEEeCCCCEEEEEEecCccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeC-CCCEEEEEECCC
Confidence 346788999999999997542223589999853 1 11110 0 12344443322 234568999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.+.
T Consensus 89 ~~~Dsg~Y~C~~~~~ 103 (123)
T 2p45_B 89 KPEDTATYYCAAGGY 103 (123)
T ss_dssp CGGGCEEEEEEESSC
T ss_pred CHHHCEEEEEEEEec
Confidence 999999999999884
No 472
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.65 E-value=3.5e-07 Score=60.21 Aligned_cols=78 Identities=22% Similarity=0.343 Sum_probs=51.6
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE-eeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII-SYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNP 222 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a 222 (236)
+..+.+.+|++++|.|.+.+...+...+.|++.. ... ......++....... .....+|.|.+++.+|+|.|.|.+
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~~~~DsG~Y~C~~ 85 (121)
T 2i24_N 7 PQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNR-GSKSFSLRINDLTVKDSGTYRCKP 85 (121)
T ss_dssp CSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEET-TTTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecC-CCCEEEEEECCCChhhCEEEEEEE
Confidence 4457888999999999997653233579999854 111 000112344332222 224568999999999999999998
Q ss_pred CC
Q psy10361 223 AN 224 (236)
Q Consensus 223 ~n 224 (236)
..
T Consensus 86 ~~ 87 (121)
T 2i24_N 86 ES 87 (121)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 473
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.65 E-value=4.5e-07 Score=59.58 Aligned_cols=78 Identities=18% Similarity=0.359 Sum_probs=52.1
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee-----------cCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD-----------SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+.+.+.+|+++.|.|...+.+.....+.|++.. . .+... ...++..+..+. .....+|.|.++
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~ 86 (120)
T 3b9v_A 8 GGGLVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADT-SKNTAYLQMNSL 86 (120)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEG-GGTEEEEEECSC
T ss_pred CCEEEeCCccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcC-CCCEEEEEECCC
Confidence 346788999999999997542123589999853 1 11110 112345544331 224468999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~Dsg~Y~C~~~~~ 101 (120)
T 3b9v_A 87 RAEDTAVYYCARWGG 101 (120)
T ss_dssp CGGGCEEEEEEEECT
T ss_pred CHHHCEEEEEEEEcC
Confidence 999999999998765
No 474
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.64 E-value=1.1e-07 Score=72.17 Aligned_cols=79 Identities=19% Similarity=0.310 Sum_probs=53.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe--E---Eeeec-----------CCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA--I---ISYDS-----------QRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~--~---~~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+..+.+.+|+++.|.|.+.+.+.+.+.+.|++... . +.... ..+++.+..+ ......+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITAD-QSTRTAYMDLRS 85 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEE-TTTTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEe-CCCCEEEEEECC
Confidence 44577889999999999987533446899997431 0 10000 1123443322 122446899999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.+.|.
T Consensus 86 v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 86 LRSEDTAVYYCARSPS 101 (280)
T ss_dssp CCSTTCEECCEEECSS
T ss_pred CChhhCEEEEEEEecC
Confidence 9999999999999997
No 475
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.64 E-value=4.2e-07 Score=59.30 Aligned_cols=78 Identities=21% Similarity=0.348 Sum_probs=52.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e--E-Eeeec---------CCCceEEEeecCcceEEEEEEcccC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A--I-ISYDS---------QRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~--~-~~~~~---------~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
+..+.+.+|++++|.|.+.... +...+.|++.. . . +.... ..++..+..+. .....+|+|.+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~~ 84 (116)
T 1tvd_A 7 SPDQTVASGSEVVLLCTYDTVY-SNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHIL-TQKAFHLVISPVR 84 (116)
T ss_dssp SCCEEEETTCCEEECCEEECCS-SSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEG-GGTEEEEEESSCC
T ss_pred CCcEEEecCCeEEEEeEeEcCC-CCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEec-CCCEEEEEEccCC
Confidence 4567889999999999987532 33479999853 1 1 21100 12344443321 2244679999999
Q ss_pred CCCCeEEEEEeCCC
Q psy10361 212 PSDNGKYQCNPANS 225 (236)
Q Consensus 212 ~~d~G~y~C~a~n~ 225 (236)
.+|+|.|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 85 TEDSATYYCAFTLP 98 (116)
T ss_dssp GGGCEEEEEEEECT
T ss_pred hHHCEEEEEEEeCC
Confidence 99999999999873
No 476
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.64 E-value=3e-07 Score=69.06 Aligned_cols=80 Identities=11% Similarity=0.280 Sum_probs=54.5
Q ss_pred CCCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--eEE---eeec-----------CCCceEEEeecCcceEEEEEEc
Q psy10361 145 GGPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--AII---SYDS-----------QRGGVNVITEKGETTVSYLLIQ 208 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~~~---~~~~-----------~~~~~~~~~~~~~~~~~~L~i~ 208 (236)
.+....+.+|+++.|.|.+.+.+...+.+.|++.. ..+ .... ..++..+..+. .....+|.|.
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~ 90 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDK-SSSTVYIQLS 90 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEG-GGTEEEEEEC
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecC-CCCEEEEEEc
Confidence 34567889999999999998764114589999863 211 1101 12344443322 1234689999
Q ss_pred ccCCCCCeEEEEEeCCC
Q psy10361 209 KARPSDNGKYQCNPANS 225 (236)
Q Consensus 209 ~v~~~d~G~y~C~a~n~ 225 (236)
+++.+|+|.|.|.+.|.
T Consensus 91 ~v~~~DsG~Y~C~~~~~ 107 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGY 107 (261)
T ss_dssp SCCGGGCEEEEEEEECT
T ss_pred CCCcccCeEEEEEEecC
Confidence 99999999999999985
No 477
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.64 E-value=4.5e-08 Score=70.41 Aligned_cols=73 Identities=18% Similarity=0.355 Sum_probs=53.8
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCeEEee---------ecCCCceEEEeecCcceEEEEEEcccCCCCCe
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEAIISY---------DSQRGGVNVITEKGETTVSYLLIQKARPSDNG 216 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 216 (236)
+....+.+|+++.|.|.+.+. |.+.+.|++++..+.. .....+..... ..|.|.++..+|.|
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-------~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 11 EPEVRIPENNPVKLSCAYSGF--SSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-------TGITFKSVTREDTG 81 (209)
T ss_dssp CSBCCEETTCCCEEECEEESC--SSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-------TEEECSCCCTTSCS
T ss_pred CCceEEEcCCCEEEEEEEeCC--CCcEEEEEEcCCceeEEEEecCccCccccCceEeec-------cEEEEeeCCHHHCc
Confidence 446678899999999999987 5569999998755311 01122333221 37999999999999
Q ss_pred EEEEEeCCCCC
Q psy10361 217 KYQCNPANSQA 227 (236)
Q Consensus 217 ~y~C~a~n~~g 227 (236)
.|+|.+.|..|
T Consensus 82 ~Y~C~~~~~~g 92 (209)
T 1nbq_A 82 TYTCMVSEEGG 92 (209)
T ss_dssp EEEEEEEETTS
T ss_pred EEEEEEecCCC
Confidence 99999999765
No 478
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.64 E-value=3.9e-07 Score=59.13 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=49.1
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeeecC---------C-CceEEEeecCcceEEEEEEccc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYDSQ---------R-GGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~~~---------~-~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+..+.+.+|++++|.|..... +...+.|++.. . .+..... . ++........ . +|.|.++
T Consensus 8 p~~~~v~~G~~vtL~C~~~~~--~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~--~--~L~I~~~ 81 (112)
T 1fo0_B 8 PRWRLVPRGQAVNLRCILKNS--QYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD--T--ELRLQVA 81 (112)
T ss_dssp CSEEECCTTCCEEEEEEESCT--TCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEET--T--EEEEEEE
T ss_pred CCeEEEecCCcEEEEEEeCCC--CCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCC--C--eEEEcCC
Confidence 445678899999999999654 33589999853 1 1211110 0 2233222221 1 7999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.+.
T Consensus 82 ~~~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 82 NMSQGRTLYCTCSAD 96 (112)
T ss_dssp SCCSCEEEEEEEESS
T ss_pred CHhHCEEEEEEEEcC
Confidence 999999999998765
No 479
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.64 E-value=4.2e-07 Score=60.92 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=57.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec---CeEEeee-cCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN---EAIISYD-SQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCN 221 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~ 221 (236)
+..+.+.+|+++.|.|...+. ...+.|++. +...... ...++...... ....+|+|.+++.+|+|.|.|.
T Consensus 25 p~~~~v~~G~svtL~C~~s~~---~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~---~~~~~L~I~~~~~~Dsg~Y~C~ 98 (134)
T 3kg5_A 25 PRFIARKRGFTVKMHCYMNSA---SGNVSWLWKQEMDENPQQLKLEKGRMEESQN---ESLATLTIQGIRFEDNGIYFCQ 98 (134)
T ss_dssp CSEEEEETTCCEEEEEECCCT---TCCCEEEEESSSSSCCEECCCCTTTEEEEEC---SSEEEEEECSCCTTTCEEEEEE
T ss_pred CCEEEEeCCCCEEEEEEECCC---CceEEEEEECCCCCCcEEEEEECCeEEEEcc---CCEEEEEECCCCcCcCEEEEEE
Confidence 556788999999999999765 247999987 3222110 12234443321 2457899999999999999999
Q ss_pred eCCC------CCceEEEEEc
Q psy10361 222 PANS------QAKSVMVNVL 235 (236)
Q Consensus 222 a~n~------~g~~~~~~v~ 235 (236)
+.+. .|....|.|.
T Consensus 99 ~~~~~~~~~~fg~GT~L~V~ 118 (134)
T 3kg5_A 99 QKCNNTSEVYQGCGTELRVM 118 (134)
T ss_dssp EECTTTCCEEECCCEEEEEE
T ss_pred EEcCCCCceEECCCEEEEEe
Confidence 9876 2445555553
No 480
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=98.63 E-value=8.9e-07 Score=59.62 Aligned_cols=79 Identities=16% Similarity=0.358 Sum_probs=52.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeee-----------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYD-----------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
++.+.+.+|++++|.|...+.......+.|++.. ..+... ...++.....+. .....+|.|.+
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~-~~~~~sL~I~~ 85 (137)
T 1rjc_A 7 SGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDN-AKNTLYLQMNS 85 (137)
T ss_dssp BCCEEECTTCCEEEEEECC-CTTTCSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEEC---CEEEEEECS
T ss_pred cCCEEEecCCCEEEEEEecCCcCCCcEEEEEEECCCCCCEEEEEEECCCCceecCcccCCcEEEEEcC-CCCEEEEEECC
Confidence 3457888999999999987532223589999853 111110 112355544332 23456899999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.+.+.
T Consensus 86 ~~~~Dsg~Y~C~~~~~ 101 (137)
T 1rjc_A 86 LKPEDTAMYYCAADTS 101 (137)
T ss_dssp CCGGGCEEEEEEECCT
T ss_pred CCHHHCEEEEEEEEcC
Confidence 9999999999999875
No 481
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.63 E-value=4.2e-07 Score=60.39 Aligned_cols=78 Identities=15% Similarity=0.332 Sum_probs=51.4
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee----------cCCCceEEEeecCcceEEEEEEcccC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD----------SQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~----------~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
+.+.+.+|++++|.|...+.......+.|++.. . .+... ...++.....+ ......+|+|.+++
T Consensus 8 ~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~sL~I~~~~ 86 (127)
T 1kxt_B 8 GGGSVQAGGSLRLSCAASGYTFSSYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRD-NAANTAYLQMDSLK 86 (127)
T ss_dssp CCEECCTTCCEEEEEEEC--CCSSSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEEC-SSSSEEEEEECSCC
T ss_pred CCEEEeCCCCEEEEeEecCCCccceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEe-CCCCEEEEEECcCC
Confidence 346778899999999997532223579999843 1 12111 11235554432 22345789999999
Q ss_pred CCCCeEEEEEeCCC
Q psy10361 212 PSDNGKYQCNPANS 225 (236)
Q Consensus 212 ~~d~G~y~C~a~n~ 225 (236)
.+|+|.|.|.+.+.
T Consensus 87 ~~Dsg~Y~C~~~~~ 100 (127)
T 1kxt_B 87 PEDTAVYYCAAGPG 100 (127)
T ss_dssp GGGCEEEEEEECSS
T ss_pred HHHCEEEEEEEEcC
Confidence 99999999999875
No 482
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.62 E-value=4.5e-07 Score=67.20 Aligned_cols=86 Identities=14% Similarity=0.194 Sum_probs=56.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCC---CCCeEEEeecC--eE---Eeee------cCCCceEEEeecCcceEEEEEEcccC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPE---PPAYIFWNHNE--AI---ISYD------SQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~---p~~~v~W~~~~--~~---~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
+..+.+.+|+++.|.|.+.+.|. ..+.+.|++.. .. +... ....+....... ...+|.|.+++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~ 84 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSG---TDFTLKISRVE 84 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCC
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCC---CEEEEEECCCC
Confidence 45678889999999999987741 04689999843 11 1110 012333332221 33579999999
Q ss_pred CCCCeEEEEEeCCCCC----ceEEEEE
Q psy10361 212 PSDNGKYQCNPANSQA----KSVMVNV 234 (236)
Q Consensus 212 ~~d~G~y~C~a~n~~g----~~~~~~v 234 (236)
.+|+|.|.|.+.|..+ ..+.|.|
T Consensus 85 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V 111 (247)
T 1svz_A 85 AEDLGIYYCFQGSHFPPTFGGGTKLEI 111 (247)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred HHHCEEEEEEEccCCccEECCCEEEEE
Confidence 9999999999999843 3445554
No 483
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.62 E-value=2.8e-07 Score=60.56 Aligned_cols=79 Identities=20% Similarity=0.340 Sum_probs=50.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe---EEeeecC---CCceEEEee--cCcceEEEEEEcccCCCCCeE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA---IISYDSQ---RGGVNVITE--KGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~---~~~~~~~---~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~ 217 (236)
+..+.+.+|+++.|.|.+.+.. |.+.+.|++++. .+..... ..+.....+ .......+|.|.+++.+|+|.
T Consensus 14 p~~~~~~~G~~v~L~C~~~~~~-~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 92 (120)
T 2yz1_A 14 EKSVSVAAGDSTVLNCTLTSLL-PVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGT 92 (120)
T ss_dssp SSEEEECTTCCEEECCEESCCC-SCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEE
T ss_pred CceEEEeCCCCEEEEeEECCCC-CCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEE
Confidence 4567889999999999997641 335899999751 1211100 011111111 001123479999999999999
Q ss_pred EEEEeCCC
Q psy10361 218 YQCNPANS 225 (236)
Q Consensus 218 y~C~a~n~ 225 (236)
|.|.+.+.
T Consensus 93 Y~C~~~~~ 100 (120)
T 2yz1_A 93 YYCVKFQK 100 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99998765
No 484
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.62 E-value=1.2e-07 Score=63.43 Aligned_cols=90 Identities=20% Similarity=0.365 Sum_probs=57.1
Q ss_pred CCCcEEEecCCeEEEEeEEeeC-----CCCCCeEEEeecCeE------Eeeec--------CCCceEEEeecCcceEEEE
Q psy10361 145 GGPEVFIENGSTINLTCVVRFS-----PEPPAYIFWNHNEAI------ISYDS--------QRGGVNVITEKGETTVSYL 205 (236)
Q Consensus 145 ~~~~~~~~~g~~~~l~C~~~~~-----p~p~~~v~W~~~~~~------~~~~~--------~~~~~~~~~~~~~~~~~~L 205 (236)
.+..+.+.+|+++.|.|..... ..+...+.|++.... +.... ..++..+..+. .....+|
T Consensus 12 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL 90 (132)
T 1nko_A 12 MQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDP-QTKNCTL 90 (132)
T ss_dssp ECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCG-GGTBCCE
T ss_pred CCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCC-CCCceEE
Confidence 3556788999999999999731 113458999986532 21111 12344433221 1233479
Q ss_pred EEcccCCCCCeEEEEEeCCCC------CceEEEEEc
Q psy10361 206 LIQKARPSDNGKYQCNPANSQ------AKSVMVNVL 235 (236)
Q Consensus 206 ~i~~v~~~d~G~y~C~a~n~~------g~~~~~~v~ 235 (236)
.|.+++.+|+|.|.|.+.+.. +..+.|.|.
T Consensus 91 ~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~ 126 (132)
T 1nko_A 91 SIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVT 126 (132)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEE
T ss_pred EEcccCcccCeeEEEEEEcCCCcccccCCceEEEec
Confidence 999999999999999987652 445666654
No 485
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.62 E-value=1.1e-08 Score=74.13 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=51.9
Q ss_pred EecCCeEEEEeEEeeCC-C-CCCeEEEeecCeEEeeecCCCceEEEeecCcceEEEEEEcccCCCCCeEEEEEeCCCCCc
Q psy10361 151 IENGSTINLTCVVRFSP-E-PPAYIFWNHNEAIISYDSQRGGVNVITEKGETTVSYLLIQKARPSDNGKYQCNPANSQAK 228 (236)
Q Consensus 151 ~~~g~~~~l~C~~~~~p-~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~y~C~a~n~~g~ 228 (236)
+..|+++.|.|.+.+.+ . +...+.|++++..+.......... .........+.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~-~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREE-QFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCE-ETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcC-cCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 56899999999998874 1 235899999997653210000000 00111122357999999999999999999999873
No 486
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.61 E-value=1.3e-07 Score=68.59 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=52.4
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe--EE---ee------ecCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA--II---SY------DSQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~--~~---~~------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+....+.+|+++.|.|.+.+.+.+.+.+.|++++. .+ .. .....++...... ...+|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 83 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSG---TSATLGITGLQTGD 83 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET---TEEEEEECSCCGGG
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccC---CEEEEEECCCCccc
Confidence 45678899999999999543321245899998541 11 10 0111233332211 34589999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|.|.+.|..+
T Consensus 84 ~G~Y~C~~~~~~~ 96 (216)
T 2xzc_L 84 EADYYCGTWDSSL 96 (216)
T ss_dssp CEEEEEEEECTTS
T ss_pred CEEEEEEEEeCCC
Confidence 9999999999864
No 487
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.61 E-value=3.3e-07 Score=67.02 Aligned_cols=79 Identities=15% Similarity=0.292 Sum_probs=53.2
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeee-----------cCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYD-----------SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
..+.+.+|+++.|.|.+.+.+...+.+.|++.. . .+... ...++..+..+. .....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~v 86 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDN-SKNTLYLQMNSL 86 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEET-TTTEEEEEECSC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecC-CCCEEEEEECCC
Confidence 346788999999999998764223589999853 1 11110 012344443321 123468999999
Q ss_pred CCCCCeEEEEEeCCCC
Q psy10361 211 RPSDNGKYQCNPANSQ 226 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~~ 226 (236)
+.+|+|.|.|.+.+..
T Consensus 87 ~~~D~G~Y~C~~~~~~ 102 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFY 102 (223)
T ss_dssp CGGGCEEEEEEEESSS
T ss_pred CHHHCEEEEEEEeccc
Confidence 9999999999998864
No 488
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.61 E-value=3.9e-07 Score=59.59 Aligned_cols=87 Identities=17% Similarity=0.285 Sum_probs=56.3
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e-E--Eeeec-----------CCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A-I--ISYDS-----------QRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~-~--~~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+.+.+.+|+++.|.|...+.+.....+.|++.. . . +.... ..++..+..+. .....+|.|.++
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~ 86 (117)
T 2yc1_A 8 GGGLVQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDD-AKKTLSLQMNSL 86 (117)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEET-TTTEEEEEECSC
T ss_pred CCEEEcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeC-CCCEEEEEECCC
Confidence 346788999999999997542123479999853 1 1 11100 12345544332 234568999999
Q ss_pred CCCCCeEEEEEeCCCC-----CceEEEEE
Q psy10361 211 RPSDNGKYQCNPANSQ-----AKSVMVNV 234 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~~-----g~~~~~~v 234 (236)
+.+|+|.|.|.+.+.. |....|.|
T Consensus 87 ~~~Dsg~Y~C~~~~~~~~~~fg~GT~l~V 115 (117)
T 2yc1_A 87 RAEDTAVYYCARGGVGSFDTWGQGTMVTV 115 (117)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEE
T ss_pred CHHHCEEEEEEEEeCCCceEECCCEEEEE
Confidence 9999999999988752 44445554
No 489
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.61 E-value=5.1e-07 Score=60.14 Aligned_cols=88 Identities=15% Similarity=0.218 Sum_probs=57.5
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC-----eEEeeec-------CCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE-----AIISYDS-------QRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~-----~~~~~~~-------~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
+..+.+.+|+++.|.|...+.. ....+.|++.. ..+.... ..++..... +......+|.|.+++.+
T Consensus 8 P~~~~v~~G~~vtL~C~~s~~~-~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~-~~~~~~~sL~I~~~~~~ 85 (129)
T 3rrq_A 8 PALLVVTEGDNATFTCSFSNTS-ESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQ-LPNGRDFHMSVVRARRN 85 (129)
T ss_dssp CSEEEEETTSCEEEEEECCCCC--CEEEEEEEEESTTSCEEEEEETC--------CCEEEEE-CTTSSEEEEEESSCCGG
T ss_pred CCEEEEeCCCCEEEEeEecCCC-CCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEE-cCCCCEEEEEECCCChh
Confidence 4567889999999999997653 13479999732 1121111 112444332 12234578999999999
Q ss_pred CCeEEEEEeCCCCC-------ceEEEEEc
Q psy10361 214 DNGKYQCNPANSQA-------KSVMVNVL 235 (236)
Q Consensus 214 d~G~y~C~a~n~~g-------~~~~~~v~ 235 (236)
|+|.|.|.+.|..+ ..+.|.|.
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~ 114 (129)
T 3rrq_A 86 DSGTYLCGAISLAPKLQIKESLRAELRVT 114 (129)
T ss_dssp GCEEEEEEEEECGGGCEEEECCCEEEEEE
T ss_pred HCEEEEEEEEecCCCceeeEeceEEEEEe
Confidence 99999999998654 33566664
No 490
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.60 E-value=3.3e-07 Score=67.62 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=50.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--------------eEEeeecCCCceEEEeecCcceEEEEEEcccC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--------------AIISYDSQRGGVNVITEKGETTVSYLLIQKAR 211 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 211 (236)
+..+.+.+|+++.|.|.+.+ +.+.+.|++.. .........++..+.... ....+|.|.+++
T Consensus 9 p~~v~v~~G~~v~L~C~~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~sL~I~~v~ 83 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS---GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFD--DYHSEMNMSALE 83 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT---TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECT--TSCEEEEECSCC
T ss_pred cceeeecCCCcEEEEEEeCC---CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCC--CCEEEEEECcCC
Confidence 44678899999999999864 34599999821 111111122344443321 234689999999
Q ss_pred CCCCeEEEEEeC
Q psy10361 212 PSDNGKYQCNPA 223 (236)
Q Consensus 212 ~~d~G~y~C~a~ 223 (236)
.+|+|.|.|.+.
T Consensus 84 ~~D~G~Y~C~~~ 95 (240)
T 3q5y_A 84 LEDSAMYFCASS 95 (240)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhHCEEEEEEEc
Confidence 999999999997
No 491
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.60 E-value=4.9e-07 Score=58.89 Aligned_cols=88 Identities=15% Similarity=0.359 Sum_probs=57.0
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----E---Eeee-----------cCCCceEEEeecCcceEEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----I---ISYD-----------SQRGGVNVITEKGETTVSYLL 206 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~---~~~~-----------~~~~~~~~~~~~~~~~~~~L~ 206 (236)
+..+.+.+|++++|.|...+.. +...+.|++... . +... ...++..+..+. .....+|.
T Consensus 5 p~~~~~~~G~~vtL~C~~~~~~-~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~ 82 (115)
T 2atp_B 5 PSSLLVQTNHTAKMSCEVKSIS-KLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESS-DSRRPFLS 82 (115)
T ss_dssp CSEEEECTTSCEEEEEECCSSC-CSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEEST-TSSSCEEE
T ss_pred CCCEEEcCCCcEEEEEEecCCC-CcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeC-CCCEEEEE
Confidence 3456788999999999997542 235899998542 1 1110 012455544321 11235899
Q ss_pred EcccCCCCCeEEEEEeCCCC----CceEEEEEc
Q psy10361 207 IQKARPSDNGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 207 i~~v~~~d~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
|.+++.+|+|.|.|.+.+.. |....|.|+
T Consensus 83 I~~~~~~DsG~Y~C~~~~~~~~~fg~GT~l~V~ 115 (115)
T 2atp_B 83 IMNVKPEDSDFYFCATVGSPKMVFGTGTKLTVV 115 (115)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred ECCCCHHHCEEEEEeEccCCcccCCCCEEEEEC
Confidence 99999999999999987642 455555553
No 492
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=1.7e-07 Score=63.06 Aligned_cols=79 Identities=22% Similarity=0.393 Sum_probs=50.7
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe---EEeeecCC---CceEEEee--cCcceEEEEEEcccCCCCCeE
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA---IISYDSQR---GGVNVITE--KGETTVSYLLIQKARPSDNGK 217 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~ 217 (236)
+..+.+.+|+++.|.|.+.+.. +...+.|++... .+...... .+.....+ .......+|.|.+++.+|+|.
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~-~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 93 (136)
T 2d9c_A 15 EKSVSVAAGESATLRCAMTSLI-PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGT 93 (136)
T ss_dssp CSEEEEETTSCEEECCEESCCC-SCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEE
T ss_pred CcEEEEcCCCCEEEEEEEcCCC-CCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEE
Confidence 4567889999999999997642 345899999752 12111100 11111100 000124579999999999999
Q ss_pred EEEEeCCC
Q psy10361 218 YQCNPANS 225 (236)
Q Consensus 218 y~C~a~n~ 225 (236)
|.|.+.+.
T Consensus 94 Y~C~~~~~ 101 (136)
T 2d9c_A 94 YYCVKFRK 101 (136)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99998764
No 493
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.60 E-value=3.1e-07 Score=60.37 Aligned_cols=86 Identities=19% Similarity=0.240 Sum_probs=56.0
Q ss_pred CcEEEecCCeEEEEeEEeeCCC-CCCeEEEeecC--eE---Eeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 147 PEVFIENGSTINLTCVVRFSPE-PPAYIFWNHNE--AI---ISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~-p~~~v~W~~~~--~~---~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+.+.+.+|+++.|.|...+.+. ....+.|++.. .. +... ...++....... ...+|.|.+++.+|
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~~~~~D 84 (120)
T 1oaq_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG---NKAALTITGAQTED 84 (120)
T ss_dssp SEEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEET---TEEEEEEESCCGGG
T ss_pred CcEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCC---CeEEEEECCCChhh
Confidence 3478889999999999976531 13479999842 11 1110 012344433222 34689999999999
Q ss_pred CeEEEEEeCCCC----CceEEEEEc
Q psy10361 215 NGKYQCNPANSQ----AKSVMVNVL 235 (236)
Q Consensus 215 ~G~y~C~a~n~~----g~~~~~~v~ 235 (236)
+|.|.|.+.+.. |....|.|.
T Consensus 85 sG~Y~C~~~~~~~~~fg~gt~L~V~ 109 (120)
T 1oaq_L 85 EAIYFCALWYSNHLVFGGGTKLTVL 109 (120)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CeEEEEEEccCCCcEECCCEEEEEc
Confidence 999999998763 455555553
No 494
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.60 E-value=1.1e-07 Score=61.71 Aligned_cols=75 Identities=13% Similarity=0.250 Sum_probs=51.4
Q ss_pred CCcEEEecCCeEEEEeEEe-eCCCCCCeEEEeecC-----eEEeee---c--------C-CCceEEEeecCcceEEEEEE
Q psy10361 146 GPEVFIENGSTINLTCVVR-FSPEPPAYIFWNHNE-----AIISYD---S--------Q-RGGVNVITEKGETTVSYLLI 207 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~-~~p~p~~~v~W~~~~-----~~~~~~---~--------~-~~~~~~~~~~~~~~~~~L~i 207 (236)
+..+.+.+|+++.|.|.+. +. +...+.|++.. ..+... . . .++...... ....+|.|
T Consensus 6 p~~~~~~~G~~v~L~C~~~~~~--~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~L~I 80 (111)
T 2qhl_A 6 LHVKTVKRGENVTMECSMSKVK--DKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVN---DQKFDLNI 80 (111)
T ss_dssp CEEEECCTTCCEEECCBCTTCS--CGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEES---SSBEEEEE
T ss_pred CceEEEeCCCCEEEEEEccCCc--ccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEc---CCeEEEEE
Confidence 4456778999999999987 65 34589999843 112110 0 0 234444322 23468999
Q ss_pred cccCCCCCeEEEEEeCCC
Q psy10361 208 QKARPSDNGKYQCNPANS 225 (236)
Q Consensus 208 ~~v~~~d~G~y~C~a~n~ 225 (236)
.+++.+|+|.|.|.+.+.
T Consensus 81 ~~~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 81 IGTREDDGGEYFCGEVEG 98 (111)
T ss_dssp SSCCGGGCEEEEEEEEET
T ss_pred CCCChhHCEEEEEEEccC
Confidence 999999999999999875
No 495
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=98.59 E-value=8.8e-07 Score=58.54 Aligned_cols=87 Identities=18% Similarity=0.350 Sum_probs=56.9
Q ss_pred cEEEecCCeEEEEeEEeeCCCCCCeEEEeecC---e--EEeee-------------cCCCceEEEeecCcceEEEEEEcc
Q psy10361 148 EVFIENGSTINLTCVVRFSPEPPAYIFWNHNE---A--IISYD-------------SQRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 148 ~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~---~--~~~~~-------------~~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
.+.+.+|++++|.|...+.......+.|++.. . .+... ...++.....+. .....+|.|.+
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~y~~~~~~~~~~~~~~~~Rf~~~~~~-~~~~~~L~I~~ 87 (124)
T 1dlf_H 9 GGLVQPGGSMKLSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDD-SKRRVYLQMNT 87 (124)
T ss_dssp CCEECTTCCEEEEEEEESSCTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEET-TTTEEEEEECS
T ss_pred CEEEcCCCCEEEEeECCCccCCCCeEEEEEECCCCCceEEEEEEeccCCCceeeCcccCCcEEEEEcC-CCCEEEEEECC
Confidence 46788999999999997542223589999742 1 12111 012345544332 22456899999
Q ss_pred cCCCCCeEEEEEeCCC-------CCceEEEEEc
Q psy10361 210 ARPSDNGKYQCNPANS-------QAKSVMVNVL 235 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~-------~g~~~~~~v~ 235 (236)
++.+|+|.|.|.+.+. .|....|.|.
T Consensus 88 ~~~~Dsg~Y~C~~~~~~~~~~~~fg~GT~L~V~ 120 (124)
T 1dlf_H 88 LRAEDTGIYYCTGIYYHYPWFAYWGQGTLVTVS 120 (124)
T ss_dssp CCGGGCEEEEEEEEBTTBSSCCCCCCCEEEEEC
T ss_pred CCHHHCEEEEEEEEeCCCcccceECCCEEEEEe
Confidence 9999999999998764 2555566654
No 496
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.59 E-value=6.7e-07 Score=59.01 Aligned_cols=78 Identities=18% Similarity=0.368 Sum_probs=52.3
Q ss_pred CcEEEecCCeEEEEeEEeeCCCCCCeEEEeecCe-----EEeee-----------cCCCceEEEeecCcceEEEEEEccc
Q psy10361 147 PEVFIENGSTINLTCVVRFSPEPPAYIFWNHNEA-----IISYD-----------SQRGGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 147 ~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~~-----~~~~~-----------~~~~~~~~~~~~~~~~~~~L~i~~v 210 (236)
..+.+.+|+++.|.|...+.+.....+.|++... .+... ...++..+..+. .....+|.|.++
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~ 86 (123)
T 2wzp_D 8 GGGLVQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDS-GKNTVYLQMNSL 86 (123)
T ss_dssp ECEEEETTCCEEEEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEET-TEEEEEEEECSC
T ss_pred CCEEEcCCCcEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeC-CCCEEEEEECCC
Confidence 3467889999999999975422235799998531 11110 012345444332 234568999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~Dsg~Y~C~~~~~ 101 (123)
T 2wzp_D 87 KPEDTAIYYCAARSG 101 (123)
T ss_dssp CGGGCEEEEEEEEES
T ss_pred CHHHCEEEEEEEecC
Confidence 999999999998765
No 497
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.59 E-value=3.7e-07 Score=68.58 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=50.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeec--CeE---E---------eeecCC-CceEEEeecCcceEEEEEEccc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHN--EAI---I---------SYDSQR-GGVNVITEKGETTVSYLLIQKA 210 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~--~~~---~---------~~~~~~-~~~~~~~~~~~~~~~~L~i~~v 210 (236)
+..+.+.+|+++.|.|.+. . +.+.+.|++. +.. + ...... ++..+.... ....+|.|.++
T Consensus 33 p~~v~v~~G~~v~L~C~~~-~--~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~sL~I~~v 107 (268)
T 3pl6_D 33 PSNKVTEKGKYVELRCDPI-S--GHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPE--GSVSTLKIQRT 107 (268)
T ss_dssp CSEEEEETTCCEEEEEBCB-T--TCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTT--SSSEEEEECSC
T ss_pred CCEEEecCCCCEEEEEEeC-C--CCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecC--CCEEEEEECCC
Confidence 4467889999999999986 3 4459999982 211 1 000001 344443321 23468999999
Q ss_pred CCCCCeEEEEEeCCC
Q psy10361 211 RPSDNGKYQCNPANS 225 (236)
Q Consensus 211 ~~~d~G~y~C~a~n~ 225 (236)
+.+|+|.|.|.+.|.
T Consensus 108 ~~~D~G~Y~C~~~~~ 122 (268)
T 3pl6_D 108 ERGDSAVYLCATSAL 122 (268)
T ss_dssp CGGGCEEEEEEEESS
T ss_pred CcccCEEEEEEEecC
Confidence 999999999999974
No 498
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.59 E-value=6.2e-07 Score=64.79 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=54.2
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCC-CCeEEEeecC--eEEe--e-------ecCCCceEEEeecCcceEEEEEEcccCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEP-PAYIFWNHNE--AIIS--Y-------DSQRGGVNVITEKGETTVSYLLIQKARPS 213 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p-~~~v~W~~~~--~~~~--~-------~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 213 (236)
+....+.+|+++.|.|.+.+.|.+ .+.+.|++++ ..+. . .....+....... ....|.|.+++.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~ 83 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG---DKAALTITGAQTE 83 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGG
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeC---CEEEEEECCCCcc
Confidence 456788899999999999887421 3589999853 2221 0 0112233332222 3358999999999
Q ss_pred CCeEEEEEeCCCCC
Q psy10361 214 DNGKYQCNPANSQA 227 (236)
Q Consensus 214 d~G~y~C~a~n~~g 227 (236)
|+|.|.|.+.|..+
T Consensus 84 D~G~Y~C~~~~~~~ 97 (212)
T 1q0x_L 84 DEAIYFCALWSNNK 97 (212)
T ss_dssp GCEEEEEEEECSSC
T ss_pred CCEEEEEEEecCch
Confidence 99999999999864
No 499
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.58 E-value=2.6e-07 Score=67.87 Aligned_cols=77 Identities=17% Similarity=0.303 Sum_probs=53.3
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC---e--EEeee------cCCCceEEEeecCcceEEEEEEcccCCCC
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE---A--IISYD------SQRGGVNVITEKGETTVSYLLIQKARPSD 214 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~---~--~~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 214 (236)
+....+.+|+++.|.|.+.+. |.+.+.|++.. . .+... ....++...... ...+|.|.+++.+|
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 105 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQD--VSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG---TDFTLTISSLQPED 105 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSC--CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred CCeEEEeCCCcEEEEEecCCC--CCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCC---CEEEEEECCCChhh
Confidence 446788999999999999887 45699999843 1 11110 111233332211 34579999999999
Q ss_pred CeEEEEEeCCCCC
Q psy10361 215 NGKYQCNPANSQA 227 (236)
Q Consensus 215 ~G~y~C~a~n~~g 227 (236)
+|.|.|.+.|..+
T Consensus 106 ~G~Y~C~~~~~~~ 118 (237)
T 3sob_L 106 FATYYCQQSYTTP 118 (237)
T ss_dssp CEEEEEEECSSSS
T ss_pred CeEEEEeeccCCc
Confidence 9999999998763
No 500
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=98.58 E-value=7.6e-07 Score=59.13 Aligned_cols=79 Identities=15% Similarity=0.323 Sum_probs=49.9
Q ss_pred CCcEEEecCCeEEEEeEEeeCCCCCCeEEEeecC--e---EEeeec-----------CCCceEEEeecCcceEEEEEEcc
Q psy10361 146 GPEVFIENGSTINLTCVVRFSPEPPAYIFWNHNE--A---IISYDS-----------QRGGVNVITEKGETTVSYLLIQK 209 (236)
Q Consensus 146 ~~~~~~~~g~~~~l~C~~~~~p~p~~~v~W~~~~--~---~~~~~~-----------~~~~~~~~~~~~~~~~~~L~i~~ 209 (236)
+..+.+.+|++++|.|...+.+.....+.|++.. . .+.... ..++.....+. .....+|.|.+
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 85 (127)
T 2x1q_A 7 SGGGLVQPGGSLRLSCAASGRTFSNYRMGWFRQAPGKEREFVATISQSGAATAYADSVKGRFTFSRDN-AKNLLYLEMLS 85 (127)
T ss_dssp ECCEEECTTCCEEEEEC------CCSEEEEEEECTTSCCEEEEEECTTSSCEEECTTTTTTEEEEEEG-GGTEEEEEECS
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCcEEEEEEECCCCCCEEEEEEecCCCceeeCcccCCcEEEEEeC-CCCEEEEEEcC
Confidence 3456788999999999987532123589999853 1 121111 12345544332 23456899999
Q ss_pred cCCCCCeEEEEEeCCC
Q psy10361 210 ARPSDNGKYQCNPANS 225 (236)
Q Consensus 210 v~~~d~G~y~C~a~n~ 225 (236)
++.+|+|.|.|.+.+.
T Consensus 86 ~~~~Dsg~Y~C~~~~~ 101 (127)
T 2x1q_A 86 LEPEDTAVYYCAASSR 101 (127)
T ss_dssp CCGGGCEEEEEEEECC
T ss_pred CCHHHCEEEEEEEEec
Confidence 9999999999998875
Done!