BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10362
(388 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/106 (89%), Positives = 103/106 (97%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF+RYGEVIDCVVMKN+E+GRSRGFGFVTFADPNNV VV+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK++SS+PKVFLGGLPSNVTETDLRTFF+RYGKVMEVVIM
Sbjct: 90 PRTLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIM 135
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 136/237 (57%), Gaps = 38/237 (16%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSG--GPMAMGPN 56
ED+ + + + +QVEIKKAEPRD SNK ND+G NQWG Q+ MG
Sbjct: 152 EDDDAVDRCVAEHFVNLSGKQVEIKKAEPRD-SNKMNDVGANQWGMNQNNHLAMGGMGMG 210
Query: 57 MGMGTPSGPMAGMTPMGPGNMMQGYQ-GWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQ 115
G GPM GM PMGPGNMMQGYQ GW STPQ+Q +P GY PS P
Sbjct: 211 GPGGQMGGPMGGMGPMGPGNMMQGYQGGWSSTPQSQ-YP------------GYGTPSGPG 257
Query: 116 GYTNWGAPPGPQ----APPQWGSSYGAPPQQTGYGSYGPTSGAPQSGYGNNWNWNMPQNG 171
G+ WGAPPGPQ APP WGS+Y APPQQ GYGSY P + PQS YGNNWNWN+PQNG
Sbjct: 258 GFQGWGAPPGPQGQGMAPPTWGSNY-APPQQPGYGSYAPQA-PPQSSYGNNWNWNIPQNG 315
Query: 172 PTTPAAGGPPAGG---------ATGAAP-TGPNPSGPSAGKPPADYSAYGTYAQYQQ 218
P G + GAAP TGP P G +A + DY+ YG Y YQQ
Sbjct: 316 PAAATGPPGQTGPGPQNDMYSRSAGAAPATGPTPPG-TAPQKAGDYAGYGNYTGYQQ 371
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FSRYG+V++ V+M + E +SRGFGF++F D + V + L G+ ++ K PR
Sbjct: 122 FFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPR 181
Query: 280 TLQK 283
K
Sbjct: 182 DSNK 185
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/106 (89%), Positives = 103/106 (97%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF+RYGEVIDCVVMKN+E+GRSRGFGFVTFADPNNV VV+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK++SS+PKVFLGGLPSNVTETDLRTFF+RYGKVMEVVIM
Sbjct: 90 PRTLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIM 135
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 131/227 (57%), Gaps = 28/227 (12%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSG--GPMAMGPN 56
ED+ + + + +QVEIKKAEPRD SNK ND+G NQWG Q+ MG
Sbjct: 152 EDDDAVDRCVAEHFVNLSGKQVEIKKAEPRD-SNKMNDVGANQWGMNQNNHLAMGGMGMG 210
Query: 57 MGMGTPSGPMAGMTPMGPGNMMQGYQ-GWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQ 115
G GPM GM PMGPGNMMQGYQ GW STPQ+Q +P GY PS P
Sbjct: 211 GPGGQMGGPMGGMGPMGPGNMMQGYQGGWSSTPQSQ-YP------------GYGTPSGPG 257
Query: 116 GYTNWGAPPGPQ----APPQWGSSYGAPPQQTGYGSYGPTSGAPQSGYGNNWNWNMPQNG 171
G+ WGAPPGPQ APP WGS+Y APPQQ GYGSY P + PQS YGNNWNWN+PQNG
Sbjct: 258 GFQGWGAPPGPQGQGMAPPTWGSNY-APPQQPGYGSYAPQA-PPQSSYGNNWNWNIPQNG 315
Query: 172 PTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQ 218
P G TGP P G +A + DY+ YG Y YQQ
Sbjct: 316 PAAATGPPGQTGPGPQTPATGPTPPG-TAPQKAGDYAGYGNYTGYQQ 361
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FSRYG+V++ V+M + E +SRGFGF++F D + V + L G+ ++ K PR
Sbjct: 122 FFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPR 181
Query: 280 TLQK 283
K
Sbjct: 182 DSNK 185
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 101/106 (95%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYFSRYGEVIDCVVMKN+E+GRSRGFGFVTF+DP+NVG+V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK++ FPKVFLGGLPSNVTETDLR+FF R+GKVMEVVIM
Sbjct: 90 PRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVVIM 135
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 84/166 (50%), Gaps = 34/166 (20%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGGPMAMGPNMG 58
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ G PM M NMG
Sbjct: 152 EDEDAVDRCVGEHFVNLNGKQVEIKRAEPRDSSSKVNDTHQGQWGPPQQGPPMGMAGNMG 211
Query: 59 -MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSA 113
MG P+G PM G PGNMMQ YQGWG+ PQT G+ GY+
Sbjct: 212 PMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTNPQTGGYA------------GYSTQYN 259
Query: 114 PQGYTNWGA--------PPGPQAPPQWGSSYGAPP--QQTGYGSYG 149
QG WGA P P QWGSSY P YGSYG
Sbjct: 260 AQG---WGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAANQAYGSYG 302
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F R+G+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPR 181
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 101/106 (95%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYFSRYGEVIDCVVMKN+E+GRSRGFGFVTF+DP+NVG+V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK++ FPKVFLGGLPSNVTETDLR+FF R+GKVMEVVIM
Sbjct: 90 PRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVVIM 135
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 98/204 (48%), Gaps = 49/204 (24%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGGPMAMGPNMG 58
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ G PM M NMG
Sbjct: 152 EDEDAVDRCVGEHFVNLNGKQVEIKRAEPRDSSSKVNDTHQGQWGPPQQGPPMGMAGNMG 211
Query: 59 -MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSA 113
MG P+G PM G PGNMMQ YQGWG+ PQT G+ GY+
Sbjct: 212 PMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTNPQTGGYA------------GYSTQYN 259
Query: 114 PQGYTNWGA--------PPGPQAPPQWGSSYGAPP--QQTGYGS--------------YG 149
QG WGA P P QWGSSY P YGS
Sbjct: 260 AQG---WGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAANQAYGSYGGPAAAASGGYGPTA 316
Query: 150 PTSGAPQSGYGNNWN-WNMPQNGP 172
T GA G G +WN WNMPQNGP
Sbjct: 317 GTGGAAGGGPGASWNSWNMPQNGP 340
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F R+G+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPR 181
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 98/106 (92%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYFSRYG+V+DCVVMKN E+GRSRGFGFVTFADP NVGVV+QN PH LDGRTIDPKPCN
Sbjct: 36 QRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQNGPHVLDGRTIDPKPCN 95
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTL KPK+N+ +PKVFLGGLPSNVTETDLR FF RYGKVMEVVIM
Sbjct: 96 PRTLSKPKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVMEVVIM 141
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 101/177 (57%), Gaps = 31/177 (17%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGGPMAMGPNMG 58
EDE + + + +QVEIKKAEPRDAS K ND GN WG PQ G M +G MG
Sbjct: 158 EDEDAVERCVADHFVNLHGKQVEIKKAEPRDASGKMNDSGNT-WGAPQGGPQMGLGGGMG 216
Query: 59 MGTP----SGPMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAP 114
+G P SGP+ GM+ + PGNMMQ YQGWG+ P + G+P GY PS
Sbjct: 217 IGGPNGQMSGPIGGMSHLPPGNMMQSYQGWGTPPASTGYP------------GYGTPSG- 263
Query: 115 QGYTNWGA----PPGPQAPPQWGSSYGAPPQQTGYGSYGPTSGAPQSGYGNNWNWNM 167
GY WGA PPQWGS+Y + Q YGSYGP G PQSGY ++WNWNM
Sbjct: 264 -GYQQWGAPPGPQNQQIPPPQWGSNYAS---QQNYGSYGPPQG-PQSGYSSSWNWNM 315
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F RYG+V++ V+M + E +SRGFGF++F D + V + + L G+ ++ K
Sbjct: 126 RQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVERCVADHFVNLHGKQVEIKKAE 185
Query: 278 PR 279
PR
Sbjct: 186 PR 187
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QR+FSRYGEVIDCVVMKN E+GRSRGFGFVTF+DP NV V+QN PHTLDGRTIDPKPCN
Sbjct: 32 QRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQNGPHTLDGRTIDPKPCN 91
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPKK +PKVFLGGLPSNVTETDLRTFF R+GKVMEVVIM
Sbjct: 92 PRTLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKVMEVVIM 137
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 108/182 (59%), Gaps = 31/182 (17%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMG----NNQWGPPQSGGPMAMG 54
EDE+ + ++ + +QVEIKKAEPRD S GN MG ++ WGPPQ+ M G
Sbjct: 154 EDEESVDRCVSEHFVNLNGKQVEIKKAEPRDGSG-GNKMGGADPSSAWGPPQAPMGMMQG 212
Query: 55 PNMGMGTPSGPMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAP 114
PN MG P PM PMGP NMMQGYQGWG++PQ Q + Y PS P
Sbjct: 213 PNGQMGGP--PMNLGAPMGP-NMMQGYQGWGTSPQQQSYAS------------YGTPSGP 257
Query: 115 QGYTNWGAPPGPQAPPQ-WGSSYGAPPQQTGYGSYGPTSGAPQSGYGNNWN-WNMPQNGP 172
Y WGAPP PQ PP WG++YG PPQQ GYGSYGP++G+ G +WN WNM QN
Sbjct: 258 GSYQGWGAPPAPQGPPPQWGNNYGGPPQQQGYGSYGPSAGS-----GTSWNSWNMAQNSG 312
Query: 173 TT 174
+T
Sbjct: 313 ST 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+R+G+V++ V+M + E +SRGFGF++F D +V + L+G+ ++ K PR
Sbjct: 124 FFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPR 183
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAGITR 334
K+F+GGL T+ +L+ FF+RYG+V++ V+M + +G +R
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVM--KNAESGRSR 56
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 98/106 (92%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRT QKPK++ FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM
Sbjct: 90 PRTQQKPKRSGGFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 135
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 10/103 (9%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 152 EDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 211
Query: 58 G-MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPG 95
G MG P+G PM G PGNMMQ YQGWG++PQT G+ G
Sbjct: 212 GPMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTSPQTGGYAG 254
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPR 181
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 98/106 (92%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 17 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCN 76
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK++ FPKVFLGGLPSNVTETDLR++F R+GKVMEVVIM
Sbjct: 77 PRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVVIM 122
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 85/167 (50%), Gaps = 38/167 (22%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGGP-MAMGPNM 57
EDE+ + + + +QVEIK+AE +S+K ND QWGPPQ GGP M M NM
Sbjct: 139 EDEEAVDRCVAEHFVNLNGKQVEIKRAE---SSSKMNDSHQGQWGPPQQGGPPMGMAGNM 195
Query: 58 G-MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPS 112
G MG P+G PM G PGNMMQ YQGWG++PQT G+ GY+
Sbjct: 196 GPMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTSPQTGGYA------------GYSTQY 243
Query: 113 APQGYTNWGA--------PPGPQAPPQWGSSYGAPPQQT--GYGSYG 149
QG WGA P P QWGSSY P GYGSYG
Sbjct: 244 NAQG---WGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAATQGYGSYG 287
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
YF+R+G+V++ V+M + E +SRGFGF++F D V + L+G+ ++ K
Sbjct: 109 YFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIK 163
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/106 (84%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYFSRYGEVIDCVVMKN+E+GRSRGFGFVTFADP+ V +V+QN PH LDGRTIDPKPCN
Sbjct: 24 QRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCN 83
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK+ +PKVFLGGLPSNVTETDLR FF RYGKVMEVVIM
Sbjct: 84 PRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIM 129
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V++ V+M + E +SRGFGF++F D +V V Q L+G+ ++ K PR
Sbjct: 116 FFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPR 175
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 106/137 (77%), Gaps = 2/137 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKNNETGRSRGFGFVTFADP+NV ++N PHTLDGRTIDPKPCN
Sbjct: 35 QRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALENGPHTLDGRTIDPKPCN 94
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRA--GITRV 335
PR+L KPK+ +PKVFLGGLP N+TETDLR+FF+RYG VMEVVIM + + G +
Sbjct: 95 PRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFL 154
Query: 336 PTQELPVQKEATAVQQV 352
+ P + ATA V
Sbjct: 155 SFENEPAVERATAEHFV 171
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 94/212 (44%), Gaps = 44/212 (20%)
Query: 5 EQGLTYYITCFLLQQVEIKKAEPRDASNKGNDMGNN--QWGPPQSGGPMAMGPNMGMGTP 62
E+ + +QVEIKKAEPRD S N M + QWG PQ+ P MG G
Sbjct: 163 ERATAEHFVNISGKQVEIKKAEPRDGSGNNNSMNADSYQWGSPQA-------PPMGNGQM 215
Query: 63 SGPMAGMTPMGPGNMMQGYQGWG-STPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWG 121
GP M NMMQGYQGWG S PQ + + G WG
Sbjct: 216 GGPPINMQ----SNMMQGYQGWGASQPQQGYGGYGASAGAANAYQG------------WG 259
Query: 122 APPGPQAPPQWGSSYGAPPQQT-GYGSYG----PTSGAPQSGYGNNWN-WNMPQNGPTTP 175
APP QWG +Y A PQQT GYG Y +G+ NWN WNMP N +T
Sbjct: 260 APP----VQQWG-NYNATPQQTQGYGGYDMYNSSGAGSAGGYGSGNWNSWNMPPNTGSTG 314
Query: 176 AA-------GGPPAGGATGAAPTGPNPSGPSA 200
+A GP AG A A PT PS P +
Sbjct: 315 SADMYSRPQSGPAAGPAGSAGPTAGGPSKPGS 346
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FSRYG V++ V+M + E +SRGFGF++F + V + G+ ++ K PR
Sbjct: 127 FFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPR 186
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 105/131 (80%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
P+ GK ++ T + QRYFSRYGEVIDCVVMKN+E+GRSRGFGFVTFADP
Sbjct: 5 PDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 64
Query: 253 NNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFN 312
+ V +V+QN PH LDGRTIDPKPCNPRTLQKPK+ +PKVFLGGLPSNVTETDLR FF
Sbjct: 65 SLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFG 124
Query: 313 RYGKVMEVVIM 323
RYGKVMEVVIM
Sbjct: 125 RYGKVMEVVIM 135
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V++ V+M + E +SRGFGF++F D +V V Q L+G+ ++ K PR
Sbjct: 122 FFGRYGKVMEVVIMYDQERKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPR 181
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYFSRYG+VIDCVVMKN+E+GRSRGFGFVTFA+P+ V VV+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK+ +PKVFLGGLPSN+TETDLR FF RYGKVMEVVIM
Sbjct: 90 PRTLQKPKRGGGYPKVFLGGLPSNITETDLRVFFGRYGKVMEVVIM 135
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V++ V+M + E +SRGFGF++F D +V V Q L+G+ ++ K PR
Sbjct: 122 FFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPR 181
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 89/184 (48%), Gaps = 42/184 (22%)
Query: 18 QQVEIKKAEPRDASNK---------------GNDMGNNQWGPPQSGGPMAM--GPNMGMG 60
+QVEIK+AEPRD S K G+ QWGPPQ+ PM + G N MG
Sbjct: 171 KQVEIKRAEPRDGSGKLGSGGGMGGGMGGAPGDAPAAGQWGPPQAA-PMNIIQGHNGQMG 229
Query: 61 TPSGPMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNW 120
P M PM N+MQGYQGWG++ GQ +S + P Y W
Sbjct: 230 GPPINM----PMAGPNIMQGYQGWGTS------AGQ---TSYAGYGAAGGGAGPGNYQGW 276
Query: 121 GAPPGPQAPPQWG--------SSYGAPPQQTGYGSYGPTSGAPQ-SGYGNNW-NWNMPQN 170
GAPP PQAPP + + PP Q GYGSY S AP + G +W NW+MPQN
Sbjct: 277 GAPPAPQAPPHAPAWPATNNYTQHAQPPAQ-GYGSYANYSSAPAGASAGGSWTNWSMPQN 335
Query: 171 GPTT 174
+T
Sbjct: 336 SNST 339
>gi|322796762|gb|EFZ19195.1| hypothetical protein SINV_16494 [Solenopsis invicta]
Length = 138
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 98/106 (92%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 24 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCN 83
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRTLQKPK++ FPKVFLGGLPSNVTETDLR++F R+GKVMEVVIM
Sbjct: 84 PRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVVIM 129
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRT QKPK++ FPKVFLGGLPSNVTETDLR+FF R+GKVMEVVIM
Sbjct: 90 PRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIM 135
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 10/101 (9%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 152 EDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 211
Query: 58 G-MGTPSGPMA----GMTPMGPGNMMQGYQGWGSTPQTQGF 93
G MG P+G M+ G PGNMMQ YQGWG++PQT G+
Sbjct: 212 GPMGGPNGQMSGPMMGGPMGPPGNMMQQYQGWGTSPQTGGY 252
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+R+G+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPR 181
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRT QKPK++ FPKVFLGGLPSNVTETDLR+FF R+GKVMEVVIM
Sbjct: 90 PRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIM 135
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 83/165 (50%), Gaps = 34/165 (20%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 152 EDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 211
Query: 58 G-MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPS 112
G MG P+G PM G PGNMMQ YQGWG++PQT G+ GY
Sbjct: 212 GPMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTSPQTGGYAA-----------GYTTQY 260
Query: 113 APQGYTNWGA--------PPGPQAPPQWGSSYGAPPQQT--GYGS 147
QG WGA P QWGSSY P GYGS
Sbjct: 261 NSQG---WGAPPGPPQQQQIPPPPHHQWGSSYNVQPAAATQGYGS 302
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+R+G+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPR 181
>gi|429892782|gb|AGA18936.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
Query: 201 GKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQ 260
GK D ++ T + RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+Q
Sbjct: 6 GKLFVDGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 65
Query: 261 NCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 320
N PHTLDGRTIDPKPCNPRTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EV
Sbjct: 66 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEV 124
Query: 321 VIM 323
VIM
Sbjct: 125 VIM 127
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 163 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 222
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 223 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 264
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 265 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 316
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 114 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 173
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRT QKPK++ FPKVFLGGLPSNVTETDLR+FF R+GKVMEVVIM
Sbjct: 90 PRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIM 135
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 89/182 (48%), Gaps = 34/182 (18%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 152 EDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 211
Query: 58 G-MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPS 112
G MG P+G PM G PGNMMQ YQGWG++PQT G+ GY
Sbjct: 212 GPMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTSPQTGGYAA-----------GYTTQY 260
Query: 113 APQGYTNWGA--------PPGPQAPPQWGSSYGAPPQQT--GYGSYGPTSGAPQSGYGNN 162
QG WGA P QWG+SY P GYGSY G N+
Sbjct: 261 NSQG---WGAPPGPPQQQQIPPPPHHQWGNSYNVQPAAATQGYGSYXXXXXXXXXGSWNS 317
Query: 163 WN 164
WN
Sbjct: 318 WN 319
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+R+G+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPR 181
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 97/106 (91%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCN
Sbjct: 30 QRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCN 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PRT QKPK++ FPKVFLGGLPSNVTETDLR+FF R+GKVMEVVIM
Sbjct: 90 PRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIM 135
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 10/101 (9%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 152 EDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 211
Query: 58 G-MGTPSGPMA----GMTPMGPGNMMQGYQGWGSTPQTQGF 93
G MG P+G M+ G PGNMMQ YQGWG++PQT G+
Sbjct: 212 GPMGGPNGQMSGPMMGGPMGPPGNMMQQYQGWGTSPQTGGY 252
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+R+G+V++ V+M + E +SRGFGF++F D + V + L+G+ ++ K PR
Sbjct: 122 FFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPR 181
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 94/106 (88%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
QRYF RYGEVIDCVVMKNNETGRSRGFGFVTFADP NV ++N PHTLDGRTIDPKPCN
Sbjct: 36 QRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALENGPHTLDGRTIDPKPCN 95
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR+L KPK+ +PKVFLGGLP N+TETDLR+FF+RYG VMEVVIM
Sbjct: 96 PRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVVIM 141
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 95/212 (44%), Gaps = 44/212 (20%)
Query: 5 EQGLTYYITCFLLQQVEIKKAEPRDASNKGNDMGNN--QWGPPQSGGPMAMGPNMGMGTP 62
E+ + +QVEIKKAEPRD S N M + QWG PQ+ P MG G
Sbjct: 164 ERATAEHFVNISGKQVEIKKAEPRDGSGNNNSMNADSYQWGSPQA-------PPMGNGQM 216
Query: 63 SGPMAGMTPMGPGNMMQGYQGWG-STPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWG 121
GP M NMMQGYQGWG S PQ Q A+ A Y WG
Sbjct: 217 GGPPMNMQ----SNMMQGYQGWGASQPQ------------QGYGGYGASAGAANAYQGWG 260
Query: 122 APPGPQAPPQWGSSYGAPPQQT-GYGSYG----PTSGAPQSGYGNNWN-WNMPQNGPTTP 175
APP P QWG+ Y A PQQT GYG Y + NWN WNMP N +T
Sbjct: 261 APP----PQQWGN-YNATPQQTQGYGGYDMYNSSGASGAGGYGSGNWNSWNMPPNTGSTG 315
Query: 176 AA-------GGPPAGGATGAAPTGPNPSGPSA 200
+A GP AG A A PT PS P +
Sbjct: 316 SADMYSRPQSGPTAGPAGTAGPTAGGPSKPGS 347
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FSRYG V++ V+M + E +SRGFGF++F + V + G+ ++ K PR
Sbjct: 128 FFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVEIKKAEPR 187
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 128
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|389615548|dbj|BAM20734.1| heterogeneous nuclear ribonucleoprotein, partial [Papilio polytes]
Length = 140
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 105/131 (80%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
P+ GK ++ T + QRYFSRYG+VIDCVVMKN+E+GRSRGFGFVTFA+P
Sbjct: 5 PDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEP 64
Query: 253 NNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFN 312
+ V VV+QN PH LDGRTIDPKPCNPRTLQKPK+ +PKVFLGGLPSN+TETDLR FF
Sbjct: 65 SLVNVVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNITETDLRMFFG 124
Query: 313 RYGKVMEVVIM 323
RYGKVMEVVIM
Sbjct: 125 RYGKVMEVVIM 135
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 128
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 21 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 80
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 81 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 124
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 160 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 219
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 220 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 261
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 262 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 313
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 111 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 170
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 24 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 83
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 84 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 127
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 163 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 222
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 223 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 264
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 265 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 316
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 114 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 173
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 128
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 128
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 24 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 83
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 84 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 127
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 163 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 222
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 223 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 264
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 265 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 316
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 114 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 173
>gi|429892786|gb|AGA18938.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 418
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 22 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 81
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 82 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 125
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 161 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 220
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 221 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 262
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 263 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 314
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 112 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 171
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFFNRYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 128
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 65/136 (47%), Gaps = 32/136 (23%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPS 265
Query: 125 GPQAPPQWGSSYGAPP 140
GP W +S+ PP
Sbjct: 266 GPSGGGSW-NSWNMPP 280
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 97/115 (84%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP NV ++N PHTLDG
Sbjct: 20 SWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALENGPHTLDG 79
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTIDPKPCNPR+ KPK+ +PKVFLGGLP N+TETDLR+FF RYG VMEVVIM
Sbjct: 80 RTIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGNVMEVVIM 134
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 5 EQGLTYYITCFLLQQVEIKKAEPRDAS-NKGNDMGNN--QWGPPQSGGPMAMGPNMGMGT 61
E+ T + +QVE+KKAEPRD + N N M + QWG PQ+ P MG G
Sbjct: 157 ERATTDHFVHISGKQVEVKKAEPRDGNQNSNNSMSTDSYQWGSPQA-------PPMGNGQ 209
Query: 62 PSGPMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWG 121
GP M NMMQGYQ WG++ P G A Y +WG
Sbjct: 210 MGGPPMNMQ----SNMMQGYQSWGAS----------QPQQGYGGYGAGAAGAANAYQSWG 255
Query: 122 APPGPQAPPQWGSSYGAPPQQT-GYGSY----GPTSGAPQSGYGNNWN-WNMPQNGPTTP 175
APP PQ QWG +Y A PQQT GYG Y +G+ +NWN WNMP N +
Sbjct: 256 APPPPQ---QWG-NYNATPQQTQGYGGYDMYNNSGAGSAGGYGSSNWNSWNMPPNTAGSA 311
Query: 176 AA----------GGPPAGGATGAAPTGPNPSGP 198
A GP AG A PT PS P
Sbjct: 312 AGSTADMYSRPQSGPTAGPGASAGPTSGGPSKP 344
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPH--TLDGRTIDPKP 275
+ +F RYG V++ V+M + E +SRGFGF++F N V V H + G+ ++ K
Sbjct: 119 RSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFE--NEVAVERATTDHFVHISGKQVEVKK 176
Query: 276 CNPRTLQKPKKNSSFPKVFLGGLP 299
PR + NS + G P
Sbjct: 177 AEPRDGNQNSNNSMSTDSYQWGSP 200
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 97/115 (84%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP NV ++N PHTLDG
Sbjct: 26 SWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALENGPHTLDG 85
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTIDPKPCNPR+ KPK+ +PKVFLGGLP N+TETDLR+FF RYG VMEVVIM
Sbjct: 86 RTIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTVMEVVIM 140
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 5 EQGLTYYITCFLLQQVEIKKAEPRDAS-NKGNDMGNN--QWGPPQSGGPMAMGPNMGMGT 61
E+ T + +QVE+KKAEPRD + N N M + QWG PQ+ P MG G
Sbjct: 163 ERATTDHFVHISGKQVEVKKAEPRDGNQNNSNSMNTDSYQWGSPQA-------PPMGNGQ 215
Query: 62 PSGPMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWG 121
GP M NM+QGYQGWG++ P G A Y +WG
Sbjct: 216 MGGPPINMQ----SNMIQGYQGWGTS----------QPQQGYGGYGAGAAGAANAYQSWG 261
Query: 122 APPGPQAPPQWGSSYGAPPQQT-GYGSY----GPTSGAPQSGYGNNWN-WNMPQNGPTTP 175
APP PQ QWG +Y A PQQT GYG Y +G+ NWN WNMP N +
Sbjct: 262 APPPPQ---QWG-NYNATPQQTQGYGGYDMYNNSGAGSAGGYGSGNWNSWNMPPNTAGSA 317
Query: 176 AA----------GGPPAGGATGAAPTGPNPSGP 198
A GP AG A PT PS P
Sbjct: 318 AGSTADMYTRPQSGPTAGPGASAGPTSGGPSKP 350
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F RYG V++ V+M + E +SRGFGF++F + + V + + G+ ++ K
Sbjct: 125 RSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQVEVKKAE 184
Query: 278 PRTLQKPKKNSSFPKVFLGGLP 299
PR + NS + G P
Sbjct: 185 PRDGNQNNSNSMNTDSYQWGSP 206
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 98/225 (43%), Gaps = 59/225 (26%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSAVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ QG+ GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQGY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQNG------- 171
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAP 325
Query: 172 -------------PTTPAAGGPPAGGATGAAP--TGPNPSGPSAG 201
T AAGGP G G P TGP S +G
Sbjct: 326 GAGAGSATDMYSRAQTWAAGGPSTTGPVGGMPGRTGPGNSASKSG 370
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 96/224 (42%), Gaps = 58/224 (25%)
Query: 18 QQVEIKKAEPRDASNKGNDMGN-------------NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N + + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKMNSECSHWGPHHAPMNMIQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ QG+ GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQGY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQNG------- 171
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAP 325
Query: 172 -------------PTTPAAGGPPAGGATGAAP-TGPNPSGPSAG 201
T AAGGP G G P TGP S +G
Sbjct: 326 GAGAGTATDMYSRAQTWAAGGPSTTGPVGGMPRTGPGNSASKSG 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 97/224 (43%), Gaps = 58/224 (25%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQNG------- 171
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNTWNMPPNSAGPTGAP 325
Query: 172 -------------PTTPAAGGPPAGGATGAAP-TGPNPSGPSAG 201
T AAGGP G G P TGP S +G
Sbjct: 326 GAGAGTATDMYSRAQTWAAGGPSTTGPVGGMPRTGPGNSASKSG 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ Q + GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQQY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQN 170
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPN 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 98/224 (43%), Gaps = 58/224 (25%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSAVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ QG+ GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQGY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQNG------- 171
GPQ PP S+Y P Q GYG Y T G +WN WN+P N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNVPPNSAGPTGAP 325
Query: 172 -------------PTTPAAGGPPAGGATGAAP-TGPNPSGPSAG 201
T AAGGP G G P TGP S +G
Sbjct: 326 GAGAGTATDMYSRAQTWAAGGPSTTGPVGGMPRTGPGNSASKSG 369
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+Q+ PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHVLQSGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 88/172 (51%), Gaps = 37/172 (21%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSAVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ QG+ GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQGY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSY----GPTSGAPQ--SGYGNNWNWNMPQN 170
GPQ PP S+Y P Q GYG Y ++GAP SG G+ +WN+P N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGDGSWSSWNLPPN 317
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + +V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+Q+ PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQSGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 98/224 (43%), Gaps = 58/224 (25%)
Query: 18 QQVEIKKAEPRDASNKGND-----------MGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNSNNSAVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ QG+ GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQQGY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQNG------- 171
GPQ PP S+Y P Q GYG Y T G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNTWNMPPNSAGPTGAP 325
Query: 172 -------------PTTPAAGGPPAGGATGAAP-TGPNPSGPSAG 201
T AAGGP G G P TGP S +G
Sbjct: 326 GAGAGTATDMYSRAQTWAAGGPSTTGPVGGMPRTGPGNSASKSG 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+QN PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/105 (82%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYF R+G++IDCVVMKNNE+GRSRGFGFVTFADP NV V+Q+ PHTLDGRTIDPKPCNP
Sbjct: 25 RYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHVLQSGPHTLDGRTIDPKPCNP 84
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RTLQKPKK + KVFLGGLPSNVTETDLRTFF RYGKV EVVIM
Sbjct: 85 RTLQKPKKGGGY-KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIM 128
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 99/224 (44%), Gaps = 58/224 (25%)
Query: 18 QQVEIKKAEPRDASNKGN-----------DMGN--NQWGPPQSGGPMAMGPNMGMGTPSG 64
+QVEIKKAEPRD S N +GN + WGPP + M G N MG P
Sbjct: 164 KQVEIKKAEPRDGSGGQNANNSTVGGAYSKLGNECSHWGPPHAPINMMQGQNGQMGGPPL 223
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAPQGYTNWGAPP 124
M P+G NMM GYQGWG++PQ G+ GY N S P Y WGAPP
Sbjct: 224 NM----PIGAPNMMPGYQGWGTSPQQGGY-------------GYGN-SGPGSYQGWGAPP 265
Query: 125 GPQAPPQWGSSYGAPPQQTGYGSYG-----PTSGAPQSGYGNNWN-WNMPQNG------- 171
GPQ PP S+Y P Q GYG Y T G G +WN WNMP N
Sbjct: 266 GPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGGPSGPSGGGSWNAWNMPPNSAGPTGAP 325
Query: 172 -------------PTTPAAGGPPAGGATGAAP-TGPNPSGPSAG 201
T AAGGP G G P TGP S +G
Sbjct: 326 GGGAGTATDMYSRAQTWAAGGPSTSGPVGGIPRTGPGNSASKSG 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F RYG+V + V+M + E +SRGFGF++F + ++V V L+G+ ++ K PR
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 94/110 (85%), Gaps = 5/110 (4%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
RYFS+YGEV+DCVVMKN ETGRSRGFGF+TFADPNNVG+V+QN PH LD RTIDPKPCNP
Sbjct: 38 RYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLVLQNTPHILDNRTIDPKPCNP 97
Query: 279 RT--LQKPKKN---SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R ++ P+++ + KVFLGGLPSN+TETDLR FF++YGKV EVVIM
Sbjct: 98 RAEMVRAPRRSMGTGNGYKVFLGGLPSNLTETDLRNFFSQYGKVSEVVIM 147
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG+V + V+M + E +SRGFGF+TF +V +++G+ ++ K
Sbjct: 132 RNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQVEIKKAE 191
Query: 278 PR 279
PR
Sbjct: 192 PR 193
>gi|307214018|gb|EFN89225.1| Heterogeneous nuclear ribonucleoprotein 27C [Harpegnathos saltator]
Length = 263
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 84/91 (92%)
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPK 292
MKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCNPRTLQKPK++ FPK
Sbjct: 1 MKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPK 60
Query: 293 VFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
VFLGGLPSNVTETDLR++F R+GKVMEVVIM
Sbjct: 61 VFLGGLPSNVTETDLRSYFTRFGKVMEVVIM 91
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 88/167 (52%), Gaps = 35/167 (20%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE+ + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 108 EDEEAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 167
Query: 58 G-MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPS 112
G MG P+G PM G PGNMMQ YQGWG++PQT G+ GY+
Sbjct: 168 GPMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTSPQTGGYA------------GYSTQY 215
Query: 113 APQGYTNWGA--------PPGPQAPPQWGSSYGAPPQQT--GYGSYG 149
QG WGA P P QWGSSY P GYGSYG
Sbjct: 216 NAQG---WGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAATQGYGSYG 259
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G+V++ V+M + E +SRGFGF++F D V + L+G+ ++ K PR
Sbjct: 78 YFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEPR 137
>gi|307170451|gb|EFN62721.1| Heterogeneous nuclear ribonucleoprotein 27C [Camponotus floridanus]
Length = 275
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 84/91 (92%)
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPK 292
MKN+E+GRSRGFGFVTF+DP NV +V+QN PH LDGRTIDPKPCNPRTLQKPK++ FPK
Sbjct: 1 MKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPK 60
Query: 293 VFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
VFLGGLPSNVTETDLR++F R+GKVMEVVIM
Sbjct: 61 VFLGGLPSNVTETDLRSYFTRFGKVMEVVIM 91
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 88/167 (52%), Gaps = 35/167 (20%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMGNNQWGPPQSGG-PMAMGPNM 57
EDE+ + + + +QVEIK+AEPRD+S+K ND QWGPPQ GG PM M NM
Sbjct: 108 EDEEAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNM 167
Query: 58 G-MGTPSG----PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPS 112
G MG P+G PM G PGNMMQ YQGWG++PQT G+ GY+
Sbjct: 168 GPMGGPNGQMGGPMMGGPMGPPGNMMQQYQGWGTSPQTGGYA------------GYSTQY 215
Query: 113 APQGYTNWGA--------PPGPQAPPQWGSSYGAPPQQT--GYGSYG 149
QG WGA P P QWGSSY P GYGSYG
Sbjct: 216 NAQG---WGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAATQGYGSYG 259
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G+V++ V+M + E +SRGFGF++F D V + L+G+ ++ K PR
Sbjct: 78 YFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEPR 137
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 92/127 (72%)
Query: 197 GPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVG 256
G AGK ++ T + Q YFSRYGEV+DCVVMKN+ET RSRGFGFVTF D V
Sbjct: 12 GEEAGKIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVA 71
Query: 257 VVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
V+ + PH +DGRTIDPK C+ R Q+ KK +PKVFLGGLP N TETDLR+FF+RYG
Sbjct: 72 KVLSSGPHEVDGRTIDPKVCSSRDSQQNKKAGQYPKVFLGGLPPNCTETDLRSFFSRYGT 131
Query: 317 VMEVVIM 323
V+EVV+M
Sbjct: 132 VVEVVLM 138
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FSRYG V++ V+M + E +SRGFGF++F ++V V ++G+ I+ K
Sbjct: 123 RSFFSRYGTVVEVVLMYDQEKKKSRGFGFLSFETEDSVKQVCAEHFVKINGKKIECKHAE 182
Query: 278 PRTLQKP 284
PR ++P
Sbjct: 183 PRDKKRP 189
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YFSRYGEVIDCVVMKN +TG+SRGFGFVTF DP+ V V+ N PH LD R IDPK CNP
Sbjct: 26 KYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLANQPHVLDSRQIDPKQCNP 85
Query: 279 RTLQKPKKNS--SFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R++ K K++ S KVF+GGLPSN+TE +++ F +G+V +VVIM
Sbjct: 86 RSMNKGGKSAENSKRKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIM 132
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+ +GEV D V+M + + RSRGFGF+TF +V VI + G+ ++ K
Sbjct: 117 KEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEKVISQHYVPVKGKQVECKRAQ 176
Query: 278 PRTLQKPKKNSSFPKVFLGG 297
PR ++ ++ P F G
Sbjct: 177 PREMKLMADCAALPSGFSAG 196
>gi|56548953|gb|AAV97647.1| DAZAP1/MEF2D fusion protein [Homo sapiens]
Length = 454
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 138
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 139 VTEVVMI 145
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 14/144 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 3 NQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ----KPK----------KNSSFPKVFLGGLP 299
VG V+ + PHTLDGR IDPKPC PR +Q +P+ +NS K+F+GG+P
Sbjct: 63 CVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIP 122
Query: 300 SNVTETDLRTFFNRYGKVMEVVIM 323
N ET+L+ +FNR+G V EVV++
Sbjct: 123 HNCGETELKEYFNRFGVVTEVVMI 146
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+R+G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 131 KEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 278 PR 279
PR
Sbjct: 191 PR 192
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 14/144 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 3 NQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ----KPK----------KNSSFPKVFLGGLP 299
VG V+ + PHTLDGR IDPKPC PR +Q +P+ +NS K+F+GG+P
Sbjct: 63 CVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIP 122
Query: 300 SNVTETDLRTFFNRYGKVMEVVIM 323
N ET+L+ +FNR+G V EVV++
Sbjct: 123 HNCGETELKEYFNRFGVVTEVVMI 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+R+G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 131 KEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 278 PR 279
PR
Sbjct: 191 PR 192
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 90/144 (62%), Gaps = 14/144 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 3 NQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ----KPK----------KNSSFPKVFLGGLP 299
VG V+ + PHTLDGR IDPKPC PR +Q +P+ +NS K+F+GG+P
Sbjct: 63 CVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIP 122
Query: 300 SNVTETDLRTFFNRYGKVMEVVIM 323
N ET+LR +F R+G V EVV++
Sbjct: 123 HNCGETELREYFKRFGVVTEVVMI 146
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 131 REYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 278 PR 279
PR
Sbjct: 191 PR 192
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 138
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 139 VTEVVMI 145
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 138
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 139 VTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 221 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 280
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 281 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 340
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 341 VTEVVMI 347
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 332 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 391
Query: 278 PR 279
PR
Sbjct: 392 PR 393
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 248
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 72 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 131
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 132 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 191
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 192 VTEVVMI 198
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 183 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 242
Query: 278 PR 279
PR
Sbjct: 243 PR 244
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 64 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 99
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 90/144 (62%), Gaps = 14/144 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 3 NQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ----KPK----------KNSSFPKVFLGGLP 299
VG V+ + PHTLDGR IDPKPC PR +Q +P+ +NS K+F+GG+P
Sbjct: 63 CVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIP 122
Query: 300 SNVTETDLRTFFNRYGKVMEVVIM 323
N ET+LR +F R+G V EVV++
Sbjct: 123 HNCGETELREYFKRFGVVTEVVMI 146
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 131 REYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 278 PR 279
PR
Sbjct: 191 PR 192
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 54 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 113
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 114 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 170
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 155 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 214
Query: 278 PR 279
PR
Sbjct: 215 PR 216
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 36 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 71
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 12/116 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK--------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 144
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 188
Query: 278 PR 279
PR
Sbjct: 189 PR 190
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGSRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 19 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 78
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 79 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 135
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 120 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 179
Query: 278 PR 279
PR
Sbjct: 180 PR 181
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 36
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|281341358|gb|EFB16942.1| hypothetical protein PANDA_012747 [Ailuropoda melanoleuca]
Length = 383
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 6 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 65
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 66 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 122
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 107 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 166
Query: 278 PR 279
PR
Sbjct: 167 PR 168
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 138
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 139 VTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 19 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 78
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 79 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 135
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 120 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 179
Query: 278 PR 279
PR
Sbjct: 180 PR 181
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 36
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 24 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 83
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 84 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 140
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 125 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 184
Query: 278 PR 279
PR
Sbjct: 185 PR 186
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 6 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 41
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 138
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 139 VTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 112 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 171
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 172 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 228
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 213 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 272
Query: 278 PR 279
PR
Sbjct: 273 PR 274
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 94 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 129
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 138
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 139 VTEVVMI 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|346469143|gb|AEO34416.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 81/122 (66%), Gaps = 13/122 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFSR+GEV+DCVVM NETGRSRGFGFVTF DP+ V V+ PH LDGRT+DPK CNPR
Sbjct: 28 YFSRFGEVVDCVVM-CNETGRSRGFGFVTFRDPSCVATVLAGGPHQLDGRTVDPKSCNPR 86
Query: 280 TLQKP------------KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+P + S K+F+GGLP+ VTETDL FF+ YGKV E +IM +
Sbjct: 87 GASRPGGGGGGPGARGVRTKGSSTKIFVGGLPATVTETDLHAFFSEYGKVTETLIMYDQE 146
Query: 328 IR 329
R
Sbjct: 147 QR 148
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS YG+V + ++M + E RSRGFGF++F V + + G+ ++ K P+
Sbjct: 129 FFSEYGKVTETLIMYDQEQRRSRGFGFISFESEEPVNQLTAQRYVDISGKQVECKRAEPK 188
Query: 280 TLQKPK 285
+ PK
Sbjct: 189 ESRPPK 194
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRA 330
++N K+F+GGL T+ L +F+R+G+V++ V+M T R+
Sbjct: 3 RQNEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDCVVMCNETGRS 48
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 85 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 144
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 145 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 204
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 205 VTEVVMI 211
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 196 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 255
Query: 278 PR 279
PR
Sbjct: 256 PR 257
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 284 PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P + K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 69 PSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 112
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 67 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 126
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 127 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 183
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 168 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 227
Query: 278 PR 279
PR
Sbjct: 228 PR 229
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 49 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 84
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 63 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 122
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 123 GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 179
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 164 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 223
Query: 278 PR 279
PR
Sbjct: 224 PR 225
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 45 KLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKT 80
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 58 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 117
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 118 GMQPERTRPKEGWQKGPRNDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 174
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 159 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 218
Query: 278 PR 279
PR
Sbjct: 219 PR 220
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 40 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 75
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 39 WSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 98
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ N+ K+F+GG+P N ET+LR +F ++G
Sbjct: 99 NIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELREYFKKFGV 158
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 159 VTEVVMI 165
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 150 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 209
Query: 278 PR 279
PR
Sbjct: 210 PR 211
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 66
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 79/126 (62%), Gaps = 17/126 (13%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFSR+GEV+D VVM N ETGRSRGFGFVTF DP+ V V+ PH LDGRT+DPK CNPR
Sbjct: 29 YFSRFGEVVDSVVMCN-ETGRSRGFGFVTFRDPSCVATVLAGGPHQLDGRTVDPKSCNPR 87
Query: 280 TLQ----------------KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ S K+F+GGLP+ VTETDL FF+ YGKV EV+IM
Sbjct: 88 SASRPGGGGGPGARGGPRGGGGGKGSTTKIFVGGLPATVTETDLHAFFSEYGKVTEVLIM 147
Query: 324 SPRTIR 329
+ R
Sbjct: 148 YDQEQR 153
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS YG+V + ++M + E RSRGFGFV+F + V + + G+ ++ K P+
Sbjct: 134 FFSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSRRYVEISGKQVECKRAEPK 193
Query: 280 TLQKPKK 286
+ K
Sbjct: 194 ESRMANK 200
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 12/116 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK--------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 144
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 188
Query: 278 PR 279
PR
Sbjct: 189 PR 190
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 12/116 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK--------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 144
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 188
Query: 278 PR 279
PR
Sbjct: 189 PR 190
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 12/116 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK--------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPEQTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 144
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + + G+ ++ K
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFRDIMGKKVEVKRAE 188
Query: 278 PR 279
PR
Sbjct: 189 PR 190
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 20 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 79
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ N+ K+F+GG+P N ET+LR +F ++G
Sbjct: 80 NIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELREYFKKFGV 139
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 140 VTEVVMI 146
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 131 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 278 PR 279
PR
Sbjct: 191 PR 192
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 47
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 21 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 80
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ N+ K+F+GG+P N ET+LR +F ++G
Sbjct: 81 NIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELREYFKKFGV 140
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 141 VTEVVMI 147
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 132 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 191
Query: 278 PR 279
PR
Sbjct: 192 PR 193
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S F K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 9 SGFEKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 48
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 12/116 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK--------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 144
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 188
Query: 278 PR 279
PR
Sbjct: 189 PR 190
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 75 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 134
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ N+ K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 135 GMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 191
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 176 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 235
Query: 278 PR 279
PR
Sbjct: 236 PR 237
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 57 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 92
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEVIDCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 68 YFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCVGAVLASRPHTLDGRNIDPKPCTPR 127
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ N+ K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 128 GMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVSEVVMI 184
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 169 REYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAVNMHFHDIMGKKVEVKRAE 228
Query: 278 PR 279
PR
Sbjct: 229 PR 230
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 50 KLFVGGLDWSTTQETLRSYFSQYGEVIDCVIMKDKT 85
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 12/116 (10%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 21 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 80
Query: 280 TLQ----KPKK--------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 81 GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 136
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 121 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 180
Query: 278 PR 279
PR
Sbjct: 181 PR 182
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 3 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 38
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 46 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 105
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ N+ K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 106 GMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 162
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 147 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 206
Query: 278 PR 279
PR
Sbjct: 207 PR 208
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 28 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 63
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 79/117 (67%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQKPK-------------KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q + NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTPPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 26 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 85
Query: 280 TLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 86 GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 142
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 127 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 186
Query: 278 PR 279
PR
Sbjct: 187 PR 188
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 8 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 43
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 108 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 167
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ +S K+F+GG+P N ET+LR +F ++G
Sbjct: 168 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGV 227
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 228 VTEVVMI 234
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 219 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 278
Query: 278 PR 279
PR
Sbjct: 279 PR 280
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 281 LQKPKKNSSFP--KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+QK SS P K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 87 IQKSFAESSVPRRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 135
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 81/117 (69%), Gaps = 13/117 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 29 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
Query: 280 TLQ----KPKKN---------SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 89 GMQPERTRPKEGWQKGPRSDYSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 278 PR 279
PR
Sbjct: 190 PR 191
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 46
>gi|355682639|gb|AER96976.1| DAZ-associated protein 1-like protein [Mustela putorius furo]
Length = 146
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 13/127 (10%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 10 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 69
Query: 270 TIDPKPCNPRTLQ----KPKK---------NSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
IDPKPC PR +Q +PK+ NS K+F+GG+P N ET+LR +F ++G
Sbjct: 70 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 129
Query: 317 VMEVVIM 323
V EVV++
Sbjct: 130 VTEVVMI 136
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 2 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 37
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 14/143 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N +G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 4 NLAGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ-------------KPKKNSSFPKVFLGGLPS 300
V V++ PH LDGR IDPKPC PR +Q K N S K+F+GG+P
Sbjct: 64 CVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKS-KKIFVGGIPH 122
Query: 301 NVTETDLRTFFNRYGKVMEVVIM 323
N E +LR +FNR+G V EVV++
Sbjct: 123 NCGEPELREYFNRFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K
Sbjct: 130 REYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Query: 278 PRTLQKP 284
PR P
Sbjct: 190 PRDSNAP 196
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 66/159 (41%), Gaps = 51/159 (32%)
Query: 5 EQGLTYYITCFLLQQVEIKKAEPRDASNKGNDMGNNQWGPPQSGGPMAMGPNMGMGTPSG 64
+Q + + + ++VE+KKAEPRD SN +G NQWGP
Sbjct: 168 DQAVNMHFHDIMGKKVEVKKAEPRD-SNAPGQLGPNQWGP-------------------- 206
Query: 65 PMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGY-----------ANPSA 113
G+ G Q QGW Q+ G PG W + Q P+ GY A PS+
Sbjct: 207 --RGILSAANGWSAQPAQGW---QQSYGPPGVWVSTGQ-PLGGYGPPLSAGRGAPAQPSS 260
Query: 114 P-QGYTNWGAPPG----PQA--------PPQWGSSYGAP 139
P + AP G PQA PPQ+G S+G P
Sbjct: 261 PFNAFLVTAAPAGGFGAPQAYAQQGYSTPPQFGYSFGTP 299
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 47
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 14/119 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN V V++ PH LDGR IDPKPC
Sbjct: 28 RNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCT 87
Query: 278 PRTLQ-------------KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR +Q K N S K+F+GG+P N E +LR +FNR+G V EVV++
Sbjct: 88 PRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGAVTEVVMI 145
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K PR
Sbjct: 132 YFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 280 TLQKP 284
+ P
Sbjct: 192 DSKAP 196
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 47
>gi|327291027|ref|XP_003230223.1| PREDICTED: DAZ-associated protein 1-like, partial [Anolis
carolinensis]
Length = 170
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 11/115 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR
Sbjct: 19 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 78
Query: 280 TLQ----KPKK-------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+Q +PK+ +S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 79 GMQPERTRPKEGWKGSRSDSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 133
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+
Sbjct: 118 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 169
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 36
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 14/119 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN V V++ PH LDGR IDPKPC
Sbjct: 28 RNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCT 87
Query: 278 PRTLQ-------------KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR +Q K N S K+F+GG+P N E +LR +FNR+G V EVV++
Sbjct: 88 PRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMI 145
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K PR
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 280 TLQKP 284
+ P
Sbjct: 192 DSKAP 196
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 47
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 14/143 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 4 NLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ-------------KPKKNSSFPKVFLGGLPS 300
V V++ PH LDGR IDPKPC PR +Q K N S K+F+GG+P
Sbjct: 64 CVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPH 122
Query: 301 NVTETDLRTFFNRYGKVMEVVIM 323
N E +LR +FNR+G V EVV++
Sbjct: 123 NCGEPELRDYFNRFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K PR
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 280 TLQKP 284
+ P
Sbjct: 192 DSKAP 196
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 47
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 14/143 (9%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 4 NLVGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQ-------------KPKKNSSFPKVFLGGLPS 300
V V++ PH LDGR IDPKPC PR +Q K N S K+F+GG+P
Sbjct: 64 CVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPH 122
Query: 301 NVTETDLRTFFNRYGKVMEVVIM 323
N E +LR +FNR+G V EVV++
Sbjct: 123 NCGEPELRDYFNRFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K PR
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 280 TLQKP 284
+ P
Sbjct: 192 DSKAP 196
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 47
>gi|47217429|emb|CAG00789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 476
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 14/119 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN V V++ PH LDGR IDPKPC
Sbjct: 17 RNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCT 76
Query: 278 PRTLQ-------------KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR +Q K N S K+F+GG+P N E +LR +FNR+G V EVV++
Sbjct: 77 PRGMQPEKSRTKEGWKGSKADSNKS-KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMI 134
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ YF+R+G V + V++ + E R RGFGF+TF +V + H + G+
Sbjct: 119 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGK 170
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 36
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 12/150 (8%)
Query: 186 TGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFG 245
T A N +G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFG
Sbjct: 8 TLATEMNSNLAGDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFG 67
Query: 246 FVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS------------FPKV 293
FV F DPN V V+ PH LDGR IDPKPC PR +Q K + K+
Sbjct: 68 FVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKI 127
Query: 294 FLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
F+GG+P N E +LR +FNR+G V EVV++
Sbjct: 128 FVGGIPHNCGEAELRDYFNRFGVVTEVVMI 157
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K PR
Sbjct: 144 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 203
Query: 280 TLQKP 284
+ P
Sbjct: 204 DSKAP 208
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM ++
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKS 59
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 84/142 (59%), Gaps = 12/142 (8%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N +G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 4 NLAGDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPN 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS------------FPKVFLGGLPSN 301
V V+ PH LDGR IDPKPC PR +Q K + K+F+GG+P N
Sbjct: 64 CVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHN 123
Query: 302 VTETDLRTFFNRYGKVMEVVIM 323
E +LR +FNR+G V EVV++
Sbjct: 124 CGEAELRDYFNRFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Query: 278 PRTLQKP 284
PR + P
Sbjct: 190 PRDSKAP 196
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM ++
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKS 47
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 84/142 (59%), Gaps = 12/142 (8%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N +G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 4 NLAGDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPN 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS------------FPKVFLGGLPSN 301
V V+ PH LDGR IDPKPC PR +Q K + K+F+GG+P N
Sbjct: 64 CVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHN 123
Query: 302 VTETDLRTFFNRYGKVMEVVIM 323
E +LR +FNR+G V EVV++
Sbjct: 124 CGEAELRDYFNRFGVVTEVVMI 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+R+G V + V++ + E R RGFGF+TF +V + H + G+ ++ K
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Query: 278 PRTLQKP 284
PR + P
Sbjct: 190 PRDSKAP 196
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM ++
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKS 47
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 76/120 (63%), Gaps = 17/120 (14%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS+YGEVIDCVVMKN +TG+SRGFGFVTF D V V+ PHT+DGR +D KPCNP+
Sbjct: 60 FFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTVLSAAPHTIDGRQVDAKPCNPK 119
Query: 280 TLQKPKKN----------------SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K K+ K+F+GGLP NV E LR FF +YGKV++V IM
Sbjct: 120 AANKGPKDGGGRIHGGGGGGGGGGDKDKKIFMGGLP-NVDEDFLRNFFGKYGKVLDVNIM 178
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 216 YQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ + +F +YG+V+D +M + + +SRGFGF+TF + V V ++G+ ++ K
Sbjct: 161 FLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQVCAEHFININGKQVECKR 220
Query: 276 CNPR 279
PR
Sbjct: 221 AEPR 224
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%), Gaps = 5/111 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++FS YGE+++C+VM++ T SRGFGFV +AD V V++N PHTLD + IDPKPC
Sbjct: 25 RQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVLKNRPHTLDNKKIDPKPCT 84
Query: 278 PRTLQKPKKNSSFP-----KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+T+Q+ KKN+ K+F+GGL N TE +++ +F++YG V EVV +
Sbjct: 85 PKTIQQQKKNAQIEHTQTHKIFIGGLAQNATEEEVKAYFSQYGSVTEVVFV 135
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG V + V + N E R +GFGFVTF + V + H + G+ ++ K PR
Sbjct: 122 YFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGKHFHEICGKRVEAKRATPR 181
Query: 280 TLQKPKKN 287
+ +N
Sbjct: 182 ETMRRNQN 189
>gi|391332836|ref|XP_003740835.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Metaseiulus occidentalis]
Length = 396
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q YF R+GE++DCVVM NE GRSRGFGFVTF DP V VV Q PH +D R +DPKPCN
Sbjct: 26 QSYFCRFGEIVDCVVM-TNEQGRSRGFGFVTFKDPQVVQVVCQGGPHRIDNRVVDPKPCN 84
Query: 278 ---PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF-NRYGKVMEVVIMSPRTIR 329
K+ +PK+F+GGLP+++TE +L+ FF YG V EVVIM + R
Sbjct: 85 PRGGPGKGGGKRGRGYPKIFVGGLPTSLTENELKMFFQEHYGDVFEVVIMYDQERR 140
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 223 RYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQ 282
YG+V + V+M + E +SRGFGFV+F + + V ++ +++G+ ++ K PR +
Sbjct: 124 HYGDVFEVVIMYDQERRKSRGFGFVSFENDDAVDRACRDHYVSINGKQVECKRAQPRDVL 183
Query: 283 KPKKNSS 289
+ K SS
Sbjct: 184 ESKMGSS 190
>gi|198435807|ref|XP_002121392.1| PREDICTED: similar to CiMsi [Ciona intestinalis]
Length = 392
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 92/152 (60%), Gaps = 14/152 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +GEV DCV+MK+ ETG SRGFGF+TFA+P++V V++ PHTLD + IDPKPC
Sbjct: 27 KQYFEGFGEVTDCVLMKDKETGVSRGFGFITFANPSSVNEVLKARPHTLDNKGIDPKPCT 86
Query: 278 PRTLQKPKKNS--SF---PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM----SPRTI 328
P+ + + KK + SF K+F+GG+ T+ D++ +F RYG V EVV + P
Sbjct: 87 PKAVLQQKKATANSFTKSHKIFIGGISMEATQEDVKGYFERYGTVAEVVFVLNKEDPSKP 146
Query: 329 RAGITRVPTQELPVQKEATAVQQVLRRSSTTK 360
G V ++ E++ Q + + T K
Sbjct: 147 HKGFGFVTFED-----ESSVDQAIAKHYHTIK 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 220 YFSRYGEVIDCVVMKNNE--TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
YF RYG V + V + N E + +GFGFVTF D ++V I HT+ + I+ K
Sbjct: 124 YFERYGTVAEVVFVLNKEDPSKPHKGFGFVTFEDESSVDQAIAKHYHTIKDKRIEAKKAE 183
Query: 278 PR 279
R
Sbjct: 184 SR 185
>gi|449273028|gb|EMC82657.1| DAZ-associated protein 1, partial [Columba livia]
Length = 395
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 10/124 (8%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 9 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 68
Query: 270 TIDPKPCNPRTLQ----KPKK------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME 319
IDPKPC PR +Q +PK+ + G+P N ET+LR +F ++G V E
Sbjct: 69 NIDPKPCTPRGMQPERTRPKEGWVRKDTWCSCDFIINGIPHNCGETELREYFKKFGVVTE 128
Query: 320 VVIM 323
VV++
Sbjct: 129 VVMI 132
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 117 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 176
Query: 278 PR 279
PR
Sbjct: 177 PR 178
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 36
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 5/111 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q++F +YGEVIDCV+MK+ T RSRGFGFV F DP V + PH LDGRTIDPKPC
Sbjct: 25 QKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQTALAGAPHILDGRTIDPKPCT 84
Query: 278 PRTLQKPKK-----NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR+ Q+ + + KVF+GG+P N E D+ FF+++G+V E ++M
Sbjct: 85 PRSQQQKTQQMGQFSGRVKKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMM 135
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G+V + ++M + + R RGFGF++F + V V HT++G+T++ K PR
Sbjct: 122 FFSQFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVCTIRYHTINGKTVECKKAEPR 181
Query: 280 TLQ 282
++
Sbjct: 182 DVR 184
>gi|326435665|gb|EGD81235.1| RNA-binding protein Musashi-1 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 77/120 (64%), Gaps = 10/120 (8%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFSR+GEV+DCVVM + TGR+RGFGFVTF D V++ PH +DGR +DPK PR
Sbjct: 445 YFSRFGEVVDCVVMTDATTGRTRGFGFVTFRDGRCCAKVLRERPHIIDGREVDPKMAVPR 504
Query: 280 T-LQKPKKNSSFP---------KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
+++ ++SS P KVF+GGLPSN T+ L FF+ +G++ E V++ + R
Sbjct: 505 EQMEQHSRSSSAPAAPRGRSARKVFVGGLPSNATDEALIGFFSNFGEIEEAVVIHDKQTR 564
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS +GE+ + VV+ + +T RGFGFVTF V+ H L G+ ++ K P+
Sbjct: 545 FFSNFGEIEEAVVIHDKQTRLPRGFGFVTFVSEQVAEHVVSLHYHDLLGKMVEVKRAEPK 604
>gi|449672029|ref|XP_004207616.1| PREDICTED: RNA-binding protein Musashi homolog 2-like, partial
[Hydra magnipapillata]
Length = 149
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A QRYF ++GEV + VVM+++ T RSRGFGFV F DP +V V +CPH +DG+ I
Sbjct: 30 TTADILQRYFEKFGEVKESVVMRDSVTKRSRGFGFVRFVDPKSVDQVQSSCPHIIDGKKI 89
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
DPK P+ P +N F KVF+GGLP + T DL +F +GKV EV++M RT +
Sbjct: 90 DPKRAVPKKSPLPGQN-QFKKVFVGGLPPDTTARDLTEYFEAFGKVTEVLLMHDRTTK 146
>gi|241833927|ref|XP_002414968.1| splicing factor, putative [Ixodes scapularis]
gi|215509180|gb|EEC18633.1| splicing factor, putative [Ixodes scapularis]
Length = 148
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 72/114 (63%), Gaps = 17/114 (14%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFSR+GEV+D VVM NETGRSRGFGFVTF DP+ V V+ PH LDGRT+DPK CNPR
Sbjct: 29 YFSRFGEVVDSVVM-CNETGRSRGFGFVTFRDPSCVATVLAGGPHQLDGRTVDPKSCNPR 87
Query: 280 ----------------TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
+ S K+FLGGLP++V E+DL FF+ YGKV
Sbjct: 88 GASRPQGGGGGGGPPRGGGGGGRKGSGTKIFLGGLPASVNESDLHAFFSEYGKV 141
>gi|74096079|ref|NP_001027721.1| CiMsi protein [Ciona intestinalis]
gi|6681425|dbj|BAA88672.1| CiMsi [Ciona intestinalis]
Length = 393
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
G AGK A T + + YF YGEV DCV+MK+ ETG SRGFGFVTF +P++V
Sbjct: 5 DGEEAGKIFVGGLARQTTLEGLRSYFENYGEVSDCVLMKDKETGFSRGFGFVTFTNPSSV 64
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS-----FPKVFLGGLPSNVTETDLRTF 310
V++ PH LD + IDPKPC + Q+ KK SS K+F+GG+ +E D++++
Sbjct: 65 AAVVKARPHNLDNKMIDPKPCTTKAAQQQKKVSSTNYSKAHKIFIGGISMEASEADVQSY 124
Query: 311 FNRYG 315
F RYG
Sbjct: 125 FERYG 129
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGR--SRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
Q YF RYG V++ V + N E +GFGFVTF D ++V I H + + ++ K
Sbjct: 122 QSYFERYGTVVEVVFVVNKEDTSKPHKGFGFVTFEDESSVDQAIAKHYHIIKDKRVEAKK 181
Query: 276 CNPR 279
R
Sbjct: 182 AESR 185
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++GEV+DC VM+++ TGRSRGFGF+TF DP V VV+ H LDG+ IDPK PR
Sbjct: 139 YFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQVVMSK-EHHLDGKIIDPKRAIPR 197
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q+ K+F+GG+P++ TE + R FFN++G+V++ +M
Sbjct: 198 EEQE-----KTAKMFVGGVPADCTEEEFRDFFNQFGRVLDATLM 236
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+++G V+D +M + +TGR RGFGFVTF + V + T+ G+ ++ K P+
Sbjct: 223 FFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEVKRATPK 282
Query: 280 TLQKPKKN 287
+ + +
Sbjct: 283 ASMRDQHD 290
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS+YGEV DCV+M++ T R RGFGFVTF D +V V++N PHTLD +TIDPKP
Sbjct: 29 KQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKNGPHTLDNKTIDPKPAT 88
Query: 278 PRTLQKPKKNSSF----PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
++ P + SF KVF+GG+ + TE D+R+FF ++G V E+ +
Sbjct: 89 MKSATPPSQGGSFNGRVKKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDL 137
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A GT + +F ++G V + + + T R RGFGFV F + V + Q H ++G
Sbjct: 114 AAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIHFHQING 173
Query: 269 RTIDPKPCNPR 279
+T++ K PR
Sbjct: 174 KTVEVKKAEPR 184
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++GEV +CV+M++ T RSRGFGFVTF+DP +V VIQ H +D + +DPK
Sbjct: 38 RKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P+ PK S K+F+GG+ ++ TE L+ FF +YGKV EV +M RT
Sbjct: 98 PKR-SHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRT 146
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 216 YQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ +++F +YG+V + +M + T R RGFGFV F + V V + H LDG+ ++ K
Sbjct: 125 HLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKK 184
Query: 276 CNPRTLQKPK---KNSSFPKVFLGGL--PSNVTETDL 307
P+ + P+ KN + L G+ PSN T+T L
Sbjct: 185 AQPKEVMMPQNAAKNRAAMMRNLYGIYDPSN-TDTSL 220
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 9/104 (8%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR PR
Sbjct: 19 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNQK----GPR 74
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 75 S-----DNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 113
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 98 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 157
Query: 278 PR 279
PR
Sbjct: 158 PR 159
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 36
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++GEV +CV+M++ T RSRGFGFVTF+DP +V VIQ H +D + +DPK
Sbjct: 38 RKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P+ PK S K+F+GG+ ++ TE L+ FF +YGKV EV +M RT
Sbjct: 98 PKR-SHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRT 146
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 216 YQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ +++F +YG+V + +M + T R RGFGFV F + V V + H LDG+ ++ K
Sbjct: 125 HLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKK 184
Query: 276 CNPRTLQKPK 285
P+ + P+
Sbjct: 185 AQPKEVMMPQ 194
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 28/158 (17%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV+ V+MK+ TGR+RGFGFV F+DP+ V + +Q HT+DGR ++ K
Sbjct: 23 RDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVDIALQE-KHTIDGRAVEAKKAV 81
Query: 278 PRTLQKPKKNSSF---------------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
PR+ Q+ + +S+ K+F+GGLP+N+TE D + +F ++G + +VV+
Sbjct: 82 PRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGLPANLTEEDFKNYFQQFGNITDVVV 141
Query: 323 MSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
M + G +++ AV+ VL++S
Sbjct: 142 MYDHNTQRPRGFGFISFDSED--------AVESVLQKS 171
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF++F + V V+Q H L+ + ++ K
Sbjct: 127 KNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSFHQLNEKLVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 287 NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+S K+F+GG+ +E LR +F++YG+V++ VIM R
Sbjct: 2 DSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDR 41
>gi|390354400|ref|XP_001199490.2| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 318
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++GEV +CV+M++ T RSRGFGFVTF+DP +V VIQ H +D + +DPK
Sbjct: 38 RKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P+ PK S K+F+GG+ ++ TE L+ FF +YGKV EV +M RT
Sbjct: 98 PKR-SHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRT 146
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 216 YQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ +++F +YG+V + +M + T R RGFGFV F + V V + H LDG+ ++ K
Sbjct: 125 HLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKK 184
Query: 276 CNPRTLQKPK 285
P+ + P+
Sbjct: 185 AQPKEVMMPQ 194
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK
Sbjct: 185 KEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKIIDPKRAI 243
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ K+F+GG+ TETD R +F ++G+V++ +M
Sbjct: 244 PRDEQEKTS-----KIFVGGVSQEATETDFREYFTQFGRVLDATLM 284
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCP--HTLDGRTIDPKP 275
+ YF+++G V+D +M + +TGR RGFGFVTF V + NCP LD + I+ K
Sbjct: 269 REYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENAL-NCPTLAILD-KPIEVKK 326
Query: 276 CNPRTLQKPKKNSSFPK 292
PR + + N+ F +
Sbjct: 327 AQPRGNIRERMNAHFDE 343
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ Y+S++GE++DCVVM + + RSRGFGFVT+AD V + PH +D RT++PK
Sbjct: 40 KEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQAMAQRPHIIDNRTVEPKRAI 99
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--------- 328
PR N S K+F+GGL + DLR +F +YG + EV+I + R
Sbjct: 100 PREQSSGDTNMSVKKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFV 159
Query: 329 ----RAGITRVPTQELPVQK-EATAVQQVLRRSSTTKVQAPFGATTLSPPNLTTPTGECR 383
+ +V Q + K + T V++ L + K + + + PP+ + P+ R
Sbjct: 160 TFDDYDSVDKVVLQRHHMIKGKRTEVKKALSKIEMEKAKRK--DSFMGPPHNSGPSHHYR 217
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG-RT 270
T A+ + YF +YG + + ++ +TGR RGFGFVTF D ++V V+ H + G RT
Sbjct: 124 TEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQRHHMIKGKRT 183
Query: 271 IDPKPCNPRTLQKPKKNSSF 290
K + ++K K+ SF
Sbjct: 184 EVKKALSKIEMEKAKRKDSF 203
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS++GEV++C VM++ TGRSRGFGF+TF DP NV V+ H+LDG+ IDPK
Sbjct: 120 KQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVK-EHSLDGKLIDPKRAI 178
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ K+F+GG+ TE D + FF ++G+V++ +M +
Sbjct: 179 PRDEQERT-----AKIFVGGVSQEATEADFKDFFMKFGRVLDATLMMDK 222
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
S T A ++ +F ++G V+D +M + +TGR RGFGFVTF V ++ P +
Sbjct: 195 SQEATEADFKD-FFMKFGRVLDATLMMDKDTGRPRGFGFVTFDSELAVERTLEG-PLAIL 252
Query: 268 GRTIDPKPCNPR 279
G+ I+ K PR
Sbjct: 253 GKPIEVKRAQPR 264
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++GEV+DC VM+++ TGRSRGFGF+TF +P V V+ H LDG+ IDPK PR
Sbjct: 182 YFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK-EHHLDGKIIDPKRAIPR 240
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+ K+F+GG+P + TE + R FFN++G+V++ +M +
Sbjct: 241 EEQEKT-----AKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDK 282
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G V+D +M + +TGR RGFGFVT+ + + V + T+ G+ ++ K
Sbjct: 264 RNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRAT 323
Query: 278 PR 279
P+
Sbjct: 324 PK 325
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YG+V+D V+MK+ TGR+RGFGFV F DP+ VIQ HT+DGR ++ K
Sbjct: 23 KDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQE-KHTIDGRAVEAKRVV 81
Query: 278 PRTLQKPKKNSS------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAG 331
PR Q+ + +S K+F+GGL VTE D R +F ++G + +VV+M T +
Sbjct: 82 PRDEQQNVQRTSNMAGPRTKKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQ-- 139
Query: 332 ITRVPTQELPVQKEATAVQQVLRRS 356
R AV +VL+++
Sbjct: 140 --RHRGFGFITYDSEDAVDKVLQQT 162
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ + V V+Q H L +T++ K
Sbjct: 118 RKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQTFHQLKEKTVEVKRAI 177
Query: 278 PRTL 281
P+ +
Sbjct: 178 PKDM 181
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 287 NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI-RAG------------IT 333
+S K+F+GG+ + +E L+ +F YG+V++VVIM RT RA
Sbjct: 2 DSDHGKIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVAD 61
Query: 334 RVPTQELPVQKEATAVQQVLRRSSTTKVQ 362
RV ++ + A ++V+ R VQ
Sbjct: 62 RVIQEKHTIDGRAVEAKRVVPRDEQQNVQ 90
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEVI+C VM++ TGRSRGFGF+TF DP V V+ H LDG+ IDPK
Sbjct: 118 KNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHQLDGKLIDPKRAI 176
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ K+F+GG+ + TE+D + FF ++G+V++ +M +
Sbjct: 177 PRDEQE-----RTAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDK 220
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G V+D +M + +TGR RGFGFVTF + V ++ P ++ G+ I+ K
Sbjct: 202 KEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAVERTLEG-PLSILGKPIEVKRAQ 260
Query: 278 PR 279
PR
Sbjct: 261 PR 262
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEVI+C VM++ TGRSRGFGF+TF DP V V+ H+LDG+ I
Sbjct: 113 TTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVK-EHSLDGKLI 171
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ + TE D FF ++G+V++ +M +
Sbjct: 172 DPKRAIPRDEQERT-----AKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDK 221
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + +TGR RGFGFVTF + V ++ P + G+ I+ K PR
Sbjct: 205 FFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAVERTLEG-PLAILGKPIEVKRAQPR 263
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 19/154 (12%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEVI+C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 127 TTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 185
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--- 328
DPK PR Q+ K+F+GG+ + T+ + + FF ++G+V++ +M +
Sbjct: 186 DPKRAIPRDEQEKTS-----KIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRP 240
Query: 329 ----------RAGITRVPTQELPVQKEATAVQQV 352
AG+ QEL + + V++
Sbjct: 241 RGFGFVTFESEAGVDACLAQELEIHGKPIEVKKA 274
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F +YGKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKT 146
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF +YG+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F +YGKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKT 146
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF +YG+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 113 TTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVK-EHYLDGKII 171
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE D ++FF ++G+V++ +M
Sbjct: 172 DPKRAIPREEQEKTA-----KIFVGGVSQEATEQDFKSFFEQFGRVIDATLM 218
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G VID +M + +TGR RGFGFVTF V +Q P + G+ I+ K PR
Sbjct: 205 FFEQFGRVIDATLMMDKDTGRPRGFGFVTFDGEAAVDACLQG-PLAILGKPIEVKRAQPR 263
>gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi]
Length = 335
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +GEV++ +VMK+ TG SRGFGFV F+D +V V++N PH+LD + IDPKPC P+
Sbjct: 28 YFESFGEVVESIVMKDKVTGFSRGFGFVKFSDQQSVSKVLKNGPHSLDNKKIDPKPCTPK 87
Query: 280 TLQKPKKNSSFP-----KVFLGGLPSNVTETDLRTFFNR-YGKVMEVVIM 323
+Q+ KK+++ K+F+GG+ + T D++ +F +G V EVV +
Sbjct: 88 GIQQEKKSAAMEHTQSHKIFIGGIAQSSTTEDVKKYFEEGFGTVNEVVFV 137
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 218 QRYFSR-YGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
++YF +G V + V + N E R +GFGFVTFA+ V + H + + I+ K
Sbjct: 121 KKYFEEGFGTVNEVVFVINKEDNRHKGFGFVTFANEQAVNKAVDMHFHEIGDKQIEAKRA 180
Query: 277 NPRTLQKPKKNSS 289
PR P+ + +
Sbjct: 181 TPREKMPPRSHDN 193
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Query: 192 GPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFAD 251
G P G S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+D
Sbjct: 170 GRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD 229
Query: 252 PNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
P+ + V+++ H +DGRT++ K PR K K+F+GGLPS++TE +LR F
Sbjct: 230 PSVIDKVLED-EHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREHF 288
Query: 312 NRYGKVMEVVIM 323
+ YGK++E IM
Sbjct: 289 SPYGKIVEHQIM 300
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG++++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K
Sbjct: 285 REHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKA 344
Query: 277 NPR 279
P+
Sbjct: 345 EPK 347
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEVI+ V+M++ TGR+RGFGFV FADP+ VI + H +DGRT++ K
Sbjct: 23 KEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD-KHIIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ S K+F+GGLPS +TE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQQTINRQSGSIHGSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTIADVVVM 138
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + + L+ +F +YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRT 42
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F+++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKT 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YF ++GEV +C+VM++ T R+RGFGF+TFADP +V V+ + H LDG+ I
Sbjct: 55 TTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLAHDQHELDGKKI 114
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
DPK P+ Q PK KVF+GGL + T D+R +F +YGKV + ++M +T
Sbjct: 115 DPKVAFPKRAQ-PKMIIKTKKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKT 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YG+V D ++M + T R RGFGF+TF + + V + H ++G+ ++ K
Sbjct: 150 RNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQ 209
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 210 PKEVMLP 216
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 121 TTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 179
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 180 DPKRAIPRDEQEKTS-----KIFVGGVSQEATEQDFKQFFMQFGRVIDATLM 226
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G VID +M + +TGR RGFGFVTF V + + P + G+TI+ K
Sbjct: 211 KQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SRPLEILGKTIEVKKAQ 269
Query: 278 PR 279
PR
Sbjct: 270 PR 271
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 250
GPN S GK ++ T + YFS++GE+ +C+VM++ T RSRGFGFVTFA
Sbjct: 10 CGPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 69
Query: 251 DPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTF 310
DP +V V+ H LD +TIDPK PR Q PK + K+F+GGL +N D++ +
Sbjct: 70 DPASVDKVLAQPHHELDSKTIDPKVAFPRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQY 128
Query: 311 FNRYGKVMEVVIMSPRT 327
F ++GKV + ++M +T
Sbjct: 129 FEQFGKVEDAMLMFDKT 145
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 120 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 179
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 180 ECKKAQPKEVMFP 192
>gi|119614915|gb|EAW94509.1| musashi homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 176
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAGITRVPTQE 339
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T RV E
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGRVAIYE 158
>gi|270001223|gb|EEZ97670.1| hypothetical protein TcasGA2_TC016215 [Tribolium castaneum]
Length = 443
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 105/199 (52%), Gaps = 39/199 (19%)
Query: 3 EDEQGLTYYITCFLL----QQVEIKKAEPRDASNKGNDMG----NNQWGPPQSGGPMAMG 54
EDE+ + ++ + +QVEIKKAEPRD S GN MG ++ WGPPQ+ M G
Sbjct: 91 EDEESVDRCVSEHFVNLNGKQVEIKKAEPRDGSG-GNKMGGADPSSAWGPPQAPMGMMQG 149
Query: 55 PNMGMGTPSGPMAGMTPMGPGNMMQGYQGWGSTPQTQGFPGQWAPSSQTPMNGYANPSAP 114
PN MG P PM PMGP NMMQGYQGWG++PQ Q + Y PS P
Sbjct: 150 PNGQMGGP--PMNLGAPMGP-NMMQGYQGWGTSPQQQSYA------------SYGTPSGP 194
Query: 115 QGYTNW-GAPPGPQAPPQWGSSYGAPPQQTGYGSYGPTSG-------------APQSGYG 160
Y W P PPQWG++YG PPQQ GYGSYG G P +G G
Sbjct: 195 GSYQGWGAPPAPQGPPPQWGNNYGGPPQQQGYGSYGEWDGKGMRGFAVYGGVLGPSAGSG 254
Query: 161 NNWN-WNMPQNGPTTPAAG 178
+WN WNM QN +T +G
Sbjct: 255 TSWNSWNMAQNSGSTGPSG 273
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 50/54 (92%)
Query: 270 TIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
TIDPKPCNPRTLQKPKK +PKVFLGGLPSNVTETDLRTFF R+GKVMEVVIM
Sbjct: 21 TIDPKPCNPRTLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKVMEVVIM 74
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F+R+G+V++ V+M + E +SRGFGF++F D +V + L+G+ ++ K PR
Sbjct: 61 FFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPR 120
>gi|441656584|ref|XP_003277097.2| PREDICTED: DAZ-associated protein 1 [Nomascus leucogenys]
gi|119589910|gb|EAW69504.1| DAZ associated protein 1, isoform CRA_d [Homo sapiens]
Length = 337
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 13/104 (12%)
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQ----KPKK-- 286
MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR +Q +PK+
Sbjct: 1 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 60
Query: 287 -------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
NS K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 61 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 104
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 89 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 148
Query: 278 PR 279
PR
Sbjct: 149 PR 150
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 214 AQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
A + YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDP
Sbjct: 151 ADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDP 210
Query: 274 KPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 211 KVAFPRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 263
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 238 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 297
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 298 ECKKAQPKEVMFP 310
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 85 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 144
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 145 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 191
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 166 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 225
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 226 ECKKAQPKEVMFP 238
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 213 YAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTID 272
Y + +FS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TID
Sbjct: 20 YRDVEYEHFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDKVLAQPHHELDSKTID 79
Query: 273 PKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PK PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 80 PKVAFPRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 133
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 108 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 167
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 168 ECKKAQPKEVMFP 180
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ C+V++N T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 16 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 124
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 158
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 159 ECKKAQPKEVMFP 171
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Query: 179 GPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNET 238
G AGG G+ +G P A A A+ + YF ++GEV +C+VM++ T
Sbjct: 204 GRAAGGNRGSPGSGKLGRSPEAMLALEQAKAGCVVAEGLREYFGQFGEVKECLVMRDPLT 263
Query: 239 GRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGL 298
RSRGFGFVTFAD V V+ H LD +TIDPK PR Q PK + K+F+GGL
Sbjct: 264 KRSRGFGFVTFADQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQ-PKMVTRTKKIFVGGL 322
Query: 299 PSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
N T D++ +F ++GKV + ++M +T
Sbjct: 323 SVNTTVEDVKQYFEQFGKVDDAMLMFDKT 351
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 326 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 385
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 386 ECKKAQPKEVMSP 398
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 34 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 93
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 94 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 183 GGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSR 242
G A+G G P G S+GK A+ T + ++F +YG + D V+MK+ T R
Sbjct: 50 GDASG--DDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPR 107
Query: 243 GFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNV 302
GFGFVTF+DP+ + V+++ H +DGRT++ K PR K K+F+GGLPS++
Sbjct: 108 GFGFVTFSDPSVIDKVLED-EHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSL 166
Query: 303 TETDLRTFFNRYGKVMEVVIM 323
TE +LR F+ YGK++E IM
Sbjct: 167 TEDELREHFSPYGKIVEHQIM 187
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG++++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K
Sbjct: 172 REHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKA 231
Query: 277 NPR 279
P+
Sbjct: 232 EPK 234
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Query: 180 PPAGGATGAAPTGPNPSGPSAGKPPADYSAYG----TYAQYQQRYFSRYGEVIDCVVMKN 235
PP G A + G + P G T A+ + YF R+GEV +C+VM++
Sbjct: 20 PPVDGHEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
Query: 236 NETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFL 295
T R+RGFGF+TF DP++V V+ N H LDG+ IDPK P+ Q K + KVF+
Sbjct: 80 PATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQ-AKLVTKTKKVFI 138
Query: 296 GGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
GGL + T D++ +F YGKV + ++M +
Sbjct: 139 GGLSATSTLEDMKQYFETYGKVEDAMLMFDK 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG+V D ++M + T R RGFGFVTF V + H ++G+ ++ K
Sbjct: 151 KQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ 210
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 211 PKEVMLP 217
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEVI+ V+M++ TGR+RGFGFV F DP+ VI + H +DGRT++ K
Sbjct: 57 KEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIMD-KHIIDGRTVEAKKAV 115
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ S K+F+GGLPS +TE+D +T+F+++G + +VV+M
Sbjct: 116 PRDDQQNINRQSGSAHVSPGPGRTKKIFVGGLPSTITESDFKTYFDQFGTITDVVVM 172
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 157 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAV 216
Query: 278 PRTLQ 282
P+ L
Sbjct: 217 PKELS 221
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K S K+F+GG+ + E L+ +F +YG+V+E VIM R
Sbjct: 30 FEIRKMESDLGKLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRV 76
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 16 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 124
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMV 158
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 159 ECKKAQPKEVMFP 171
>gi|242347896|gb|ACS92718.1| musashi-like protein 2S [Ambystoma mexicanum]
Length = 160
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F+++GKV + ++M +T
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKT 146
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 16 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 124
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 158
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 159 ECKKAQPKEVMFP 171
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++FS+YGE+ D V+MK+ TG+ RGFGFVT+ADP+ + VIQ+ H LDG+T++ K P
Sbjct: 60 KHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQD-KHILDGKTVEIKRTIP 118
Query: 279 R--TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R + + PK KVF+GG+P+++TE + + +F+++GKV+E IM R
Sbjct: 119 RGNSSKAPKTK----KVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDR 164
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ YFS++G+V++ +M++ TGRSRGFGF+TF V +I Q L G+ ++ K
Sbjct: 146 KDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKA 205
Query: 277 NPR 279
P+
Sbjct: 206 EPK 208
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 76/117 (64%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEVI+ V+M++ TGR+RGFGFV FADP+ VI + H +DGRT++ K
Sbjct: 23 KEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD-KHIIDGRTVEAKKAV 81
Query: 278 PRTLQKP--KKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ ++ S K+F+GGLPS +TE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQQTINRQTGSIHGSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTITDVVVM 138
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAV 182
Query: 278 PRTL 281
P+ L
Sbjct: 183 PKEL 186
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + + L+ +F +YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRT 42
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFAD +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 16 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 124
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 158
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 159 ECKKAQPKEVMFP 171
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 34 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 93
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 94 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|301614774|ref|XP_002936864.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Xenopus
(Silurana) tropicalis]
Length = 168
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 18 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 77
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 78 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 126
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 101 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 160
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 161 ECKKAQPKEVMFP 173
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 34 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 93
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 94 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 183 GGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSR 242
G A+G G P G S+GK A+ T + ++F +YG + D V+MK+ T R
Sbjct: 50 GDASG--DDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPR 107
Query: 243 GFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNV 302
GFGFVTF+DP+ + V+++ H +DGRT++ K PR K K+F+GGLPS++
Sbjct: 108 GFGFVTFSDPSVIDKVLED-EHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSL 166
Query: 303 TETDLRTFFNRYGKVMEVVIM 323
TE +LR F+ YGK++E IM
Sbjct: 167 TEDELREHFSPYGKIVEHQIM 187
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG++++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K
Sbjct: 172 REHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKA 231
Query: 277 NPR 279
P+
Sbjct: 232 EPK 234
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 17 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 76
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 77 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 125
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 100 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 159
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 160 ECKKAQPKEVMFP 172
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 33 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 92
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 93 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 141
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 116 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 175
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 176 ECKKAQPKEVMFP 188
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 16 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 124
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 158
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 159 ECKKAQPKEVMFP 171
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q +K S K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQ--EKTS---KIFVGGVSQEATEQDFKQFFMQFGRVIDATLM 115
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G VID +M + +TGR RGFGFVTF V + + P + G+TI+ K
Sbjct: 100 KQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SRPLEILGKTIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|344243397|gb|EGV99500.1| DAZ-associated protein 1 [Cricetulus griseus]
Length = 365
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 13/104 (12%)
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQ----KPKK-- 286
MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR IDPKPC PR +Q +PK+
Sbjct: 1 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 60
Query: 287 -------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+S K+F+GG+P N ET+LR +F ++G V EVV++
Sbjct: 61 QKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMI 104
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V + V++ + E R RGFGF+TF D +V + H + G+ ++ K
Sbjct: 89 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 148
Query: 278 PR 279
PR
Sbjct: 149 PR 150
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 25 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 84
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 85 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 133
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 108 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 167
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 168 ECKKAQPKEVMFP 180
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 6 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 65
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 66 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 114
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 89 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 148
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 149 ECKKAQPKEVMFP 161
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEVI+ V+M++ TGR+RGFGFV FADP+ VI + H +DGRT++ K
Sbjct: 23 KDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIMD-KHIIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ S K+F+GGLPS +TE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQQNINRQSGSAHASPGPGRTKKIFVGGLPSTITESDFKMYFDQFGTITDVVVM 138
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YGE+ +C+VM++ T RSRGFGFVTF+DP +V V+ N PH LD + IDPK
Sbjct: 41 REYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKVLANGPHELDSKVIDPKVAF 100
Query: 278 PR---TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR T +PK + K+F+GGL ++ T D++ +F ++GK+ + ++M +
Sbjct: 101 PRRPNTANQPKLVTKTKKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDK 152
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G++ D ++M + T R RGF FVTF + + V V + H ++ + ++ K
Sbjct: 134 KQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCEIHFHEINNKMVECKKAQ 193
Query: 278 PRTLQKPK 285
P+ + P+
Sbjct: 194 PKEVMMPQ 201
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFAD +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 5 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 64
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 65 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 113
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 88 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 147
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 148 ECKKAQPKEVMFP 160
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 36 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPR 95
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 96 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 5 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 64
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 65 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 113
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 88 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 147
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 148 ECKKAQPKEVMFP 160
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 24/204 (11%)
Query: 138 APPQQTG------YGSYG----PTSGAPQS-GYGNNWN-WNMPQNGPTT----PAAGGPP 181
A PQQ+G Y YG +G QS GYGN+ N WN Q+G + P G
Sbjct: 77 ADPQQSGQGGNVDYSGYGNMNQDYNGYNQSQGYGNDGNGWNEDQHGMNSNGQGPYGDGSN 136
Query: 182 AGGATGAAPT--GPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETG 239
GG P+ G + + GK + T + + YFS++GEV +C VM++ +G
Sbjct: 137 MGGMHNQGPSADGGSTAIKEDGKMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSG 196
Query: 240 RSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLP 299
RSRGFGF+TF DP V +V+ H LDG+ IDPK PR Q+ K+F+GG+
Sbjct: 197 RSRGFGFLTFKDPKTVNIVMV-KEHYLDGKIIDPKRAIPRDEQERTS-----KIFVGGVS 250
Query: 300 SNVTETDLRTFFNRYGKVMEVVIM 323
+E + + FF ++G+V++ +M
Sbjct: 251 QEASEEEFKNFFMQFGRVIDSTLM 274
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G VID +M + ETGR RGFGFVTF + V + +Q+ + + I+ K
Sbjct: 259 KNFFMQFGRVIDSTLMIDKETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQ 318
Query: 278 PR 279
PR
Sbjct: 319 PR 320
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 36 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPR 95
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 96 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ +GRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 123 TTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK-EHFLDGKII 181
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ + T+ + R +F ++G+V++ +M
Sbjct: 182 DPKRAIPRDEQEKTS-----KIFVGGVSQDTTDQEFREYFAQFGRVVDATLM 228
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V I N P + G+ I
Sbjct: 207 TTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACI-NVPLEIHGKPI 265
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNV 302
+ K PR + ++ +S F G +V
Sbjct: 266 EVKKAQPRGNLREEEEASKRGKFRKGDDQSV 296
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 126 TTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK-EHYLDGKII 184
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ + T+ + R FF ++G+V++ +M +
Sbjct: 185 DPKRAIPRDEQEKTS-----KIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDK 234
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + +F+++G VID +M + +TGR RGFGFVTF V I N P + G+ I
Sbjct: 210 TTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDACI-NIPLEIHGKPI 268
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGG 297
+ K PR + +++++ F G
Sbjct: 269 EVKRAQPRGNLREEEDAAKRNKFKKG 294
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 112
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 113 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 161
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 136 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 195
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 196 ECKKAQPKEVMFP 208
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKPKKNS 288
P+ + P ++
Sbjct: 186 PKEVMSPTSSA 196
>gi|442760483|gb|JAA72400.1| Putative splicing factor [Ixodes ricinus]
Length = 138
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 66/108 (61%), Gaps = 17/108 (15%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFSR+GEV+D VVM NETGRSRGFGFVTF DP+ V V+ PH LDGRT+DPK CNPR
Sbjct: 29 YFSRFGEVVDSVVM-CNETGRSRGFGFVTFRDPSCVATVLAGGPHQLDGRTVDPKSCNPR 87
Query: 280 ----------------TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+ S K+FLGGLP++V E+DL F
Sbjct: 88 GASRPQGGGGGGGPPRGGGGGGRKGSGTKIFLGGLPASVNESDLHAFL 135
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 123 TTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 181
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 182 DPKRAIPRDEQEKTS-----KIFVGGVSQEATEQDFKQFFMQFGRVVDATLM 228
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G++I+ K
Sbjct: 213 KQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATL-SRPLEILGKSIEVKKAQ 271
Query: 278 PR 279
PR
Sbjct: 272 PR 273
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 36 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 95
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 96 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Query: 178 GGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
GG + G++ T N S P+ GK ++ T ++ YF +G V D ++MK+
Sbjct: 159 GGNASNGSSSGRSTPNNGSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPV 218
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
T RSRGFGF+TF +PN+V V+Q HTLDG+ IDPK P+ K + N + K+F+GG
Sbjct: 219 TQRSRGFGFITFQEPNSVDKVLQVPIHTLDGKKIDPKHATPKNRPKTQSNKT-KKIFVGG 277
Query: 298 LPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
+ + + +++ +F+++GKV E V++M +T R
Sbjct: 278 VSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKR 310
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 282 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 341
Query: 272 DPKPCNPRTLQKPKKNSSFPK-VFLGGL 298
+ K P+ P K + LG L
Sbjct: 342 ECKKAQPKEAVAPTAQQLLQKRIILGNL 369
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV +C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK PR
Sbjct: 126 YFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK-EHYLDGKIIDPKRAIPR 184
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+ K+F+GG+ TE D FF ++G+V++ +M +
Sbjct: 185 EEQERTS-----KIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDK 226
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + ETGR RGFGFVTF V ++ P + G+ I+ K PR
Sbjct: 210 FFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRG-PLQILGKQIEVKRAQPR 268
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKPKKNS 288
P+ + P ++
Sbjct: 186 PKEVMSPTSSA 196
>gi|260791472|ref|XP_002590753.1| hypothetical protein BRAFLDRAFT_218784 [Branchiostoma floridae]
gi|229275949|gb|EEN46764.1| hypothetical protein BRAFLDRAFT_218784 [Branchiostoma floridae]
Length = 137
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T A + YF +YGE+ +C+VMK+ T RSRGFGFVTF DP +V V+ H LD
Sbjct: 8 SWQTTADSLREYFCKYGEIKECMVMKDPVTRRSRGFGFVTFRDPASVDKVLAVSKHELDS 67
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+TIDPK PR Q PK + K+F+GGL +N D++ +F YGK+ + ++M
Sbjct: 68 KTIDPKVAFPRRAQ-PKMVTRTKKIFVGGLSANTVLEDVKNYFGHYGKIEDAMLM 121
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKPKKNS 288
P+ + P ++
Sbjct: 186 PKEVMSPTSSA 196
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 127 TTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK-EHYLDGKII 185
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ + T+ + R FF ++G+V++ +M +
Sbjct: 186 DPKRAIPRDEQEKTS-----KIFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMDK 235
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + +F+++G VID +M + +TGR RGFGFVTF V I + P + G+ I
Sbjct: 211 TTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCI-SIPLEIHGKPI 269
Query: 272 DPKPCNP----RTLQKPKKNSSFPKV 293
+ K P R ++ K F KV
Sbjct: 270 EVKRAQPRGNLREEEEAAKRGKFKKV 295
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHFLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ + TE D +FF ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKT-----AKIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDK 118
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G VID +M + +TGR RGFGFVTF V ++ P + G+ I+ K
Sbjct: 100 ESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVERCLEYHPLEILGKPIEVKRAQ 159
Query: 278 PR 279
PR
Sbjct: 160 PR 161
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Query: 175 PAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMK 234
AAG AGG G + G S+GK A+ T + ++F +YG + D V+MK
Sbjct: 75 EAAGNVDAGGEDG--RDADSGGGDSSGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMK 132
Query: 235 NNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVF 294
+ T RGFGFVTF+DP+ + V+++ H +DGRT++ K P+ K K+F
Sbjct: 133 DKHTRMPRGFGFVTFSDPSVLDRVLEDA-HVIDGRTVEVKRTVPKEEMSSKDGPKTKKIF 191
Query: 295 LGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+GG+PS++TE L+ F+ YGKV+E IM
Sbjct: 192 VGGIPSSLTEDKLKEHFSSYGKVVEHQIM 220
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + V V+ + H L G+ ++ K
Sbjct: 205 KEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKA 264
Query: 277 NPR 279
P+
Sbjct: 265 EPK 267
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEVI+C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK PR
Sbjct: 202 YFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKIIDPKRAIPR 260
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI----------- 328
Q+ K+F+GG+ T+ + + FF ++G+V++ +M +
Sbjct: 261 DEQEKTS-----KIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF 315
Query: 329 --RAGITRVPTQELPVQKEATAVQQV 352
AG+ ++L + + V++
Sbjct: 316 ESEAGVEACLARDLEIHGKLIEVKKA 341
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + +F+++G V+D +M + +TGR RGFGFVTF V + + G+ I
Sbjct: 278 TTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAR-DLEIHGKLI 336
Query: 272 DPKPCNPR 279
+ K PR
Sbjct: 337 EVKKAQPR 344
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YGE+ +C+VM++ T RSRGFGFVT+ADP +V V+ N PH LD + IDPK
Sbjct: 40 REYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLANGPHELDTKLIDPKLAF 99
Query: 278 PR---TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+PK + K+F+GGL ++ T D++ +F+++GK+ + ++M +
Sbjct: 100 PRRPNATQQPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDK 151
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
SA T +Q YFS++G++ D ++M + T R RGF FVTF + V V + H ++
Sbjct: 124 SASTTLEDVKQ-YFSQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDKVCEIHFHEIN 182
Query: 268 GRTIDPK 274
+ ++ K
Sbjct: 183 NKMVECK 189
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 16 REYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 124
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 105 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 164
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 165 PKEVMSP 171
>gi|26327253|dbj|BAC27370.1| unnamed protein product [Mus musculus]
Length = 192
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTF DP +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI---RAGITRVP 336
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T R + R
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGKMARRK 158
Query: 337 TQELP 341
LP
Sbjct: 159 RMTLP 163
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS+YGEV++C VM++ TGRSRGFGF+TF DP V VV+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 118
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + + + G+ I+ K
Sbjct: 100 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACL-SANLEIHGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV++C VM++ TGRSRGFGF+TF DP V V+ HTLDG+ IDPK
Sbjct: 16 KNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVK-EHTLDGKLIDPKRAI 74
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ K+F+GG+ ++ D FF R+G V++ +M +
Sbjct: 75 PRDEQERT-----AKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDK 118
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F R+G V+D +M + ETGR RGFGFVTF V ++ P + G+ I+ K PR
Sbjct: 102 FFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLE-SPLAICGKNIEVKRAQPR 160
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 19/154 (12%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 52 TTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 110
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--- 328
DPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 111 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRP 165
Query: 329 ----------RAGITRVPTQELPVQKEATAVQQV 352
AG+ + EL + +A V++
Sbjct: 166 RGFGFLTFESEAGVEACLSTELEIHGKAIEVKKA 199
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKPKKNS 288
P+ + P ++
Sbjct: 186 PKEVMSPTSSA 196
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV +C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK
Sbjct: 122 KNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK-EHYLDGKIIDPKRAI 180
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ K+F+GG+ TE D FF ++G+V++ +M
Sbjct: 181 PREEQERTS-----KIFVGGVSQEATEEDFTNFFKQFGRVVDATLM 221
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + ETGR RGFGFVTF V ++ P + G+ I+ K PR
Sbjct: 208 FFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLR-APLQILGKQIEVKRAQPR 266
Query: 280 TLQKPKKNSSFPKVF 294
+ ++ K F
Sbjct: 267 GNMRDEEGGDGGKKF 281
>gi|431922222|gb|ELK19313.1| DAZ-associated protein 1 [Pteropus alecto]
Length = 380
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 9/98 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR PR
Sbjct: 40 YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNQK----GPR 95
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
+ NS K+F+GG+P N ET+LR +F ++G V
Sbjct: 96 S-----DNSKSNKIFVGGIPHNCGETELREYFKKFGVV 128
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 22 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 57
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ ++GRSRGFGF+TF DP V V+ H+LDG+ I
Sbjct: 11 TTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVK-EHSLDGKLI 69
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M +
Sbjct: 70 DPKRAIPRDEQERT-----AKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMDK 119
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G V+D +M + +TGR RGFGFVTF D V ++ P + G+ I+ K
Sbjct: 101 KEFFMQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAVERTLEG-PLAILGKGIEVKRAQ 159
Query: 278 PR 279
PR
Sbjct: 160 PR 161
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEVI+C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK PR
Sbjct: 138 YFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKIIDPKRAIPR 196
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI----------- 328
Q+ K+F+GG+ T+ + + FF ++G+V++ +M +
Sbjct: 197 DEQEKTS-----KIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF 251
Query: 329 --RAGITRVPTQELPVQKEATAVQQV 352
AG+ ++L + + V++
Sbjct: 252 ESEAGVEACLARDLEIHGKLIEVKKA 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + +F+++G V+D +M + +TGR RGFGFVTF V + + G+ I
Sbjct: 214 TTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLE-IHGKLI 272
Query: 272 DPKPCNPR 279
+ K PR
Sbjct: 273 EVKKAQPR 280
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV++ V+M++ TGR+RGFGFV FADP VI H +DGRT++ K
Sbjct: 23 KEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME-KHVVDGRTVEAKKAV 81
Query: 278 PRTLQK--PKKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR Q + SS K+F+GGL S VTE D + +F ++G + +VV+M
Sbjct: 82 PRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDH 141
Query: 326 RTIR---AGITRVPTQELPVQKEATAVQQVLRRS 356
T+R G ++E AV +VL ++
Sbjct: 142 NTLRPRGFGFITYDSEE--------AVDRVLHKT 167
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 8 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 67
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 68 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 114
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 89 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 148
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 149 ECKKAQPKEVMFP 161
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV +C+VM++ T RSRGFGF+TF DP +V V+ H LD + IDPK
Sbjct: 38 REYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQAAHELDQKKIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ PK + K+F+GGL +N T D++ F++YGKV E +M
Sbjct: 98 PKR-SHPKVTRT-KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLM 141
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG+V + +M + +T R RGFGFVTF + V + + H ++ + ++ K
Sbjct: 126 KNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICEIHFHEVNSKMVECKKAQ 185
Query: 278 PRTL 281
P+ +
Sbjct: 186 PKEV 189
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 36 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 95
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 96 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 142
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 176
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 177 ECKKAQPKEVMFP 189
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV++ V+M++ TGR+RGFGF+ FADP VI H +DGR ++ K
Sbjct: 23 REYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME-KHMIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKN-----------SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ S K+F+GGL S VTE D RT+F ++G + +VV+M
Sbjct: 82 PRDDQQALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVM 138
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K P+
Sbjct: 125 YFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPK 184
Query: 280 TL 281
L
Sbjct: 185 EL 186
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+F+GG+ + E LR +F +YG+V+E VIM R
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDR 41
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 122 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 180
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 181 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEQDFKQFFMQFGRVVDATLM 227
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 212 KQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SRPLEILGKPIEVKKAQ 270
Query: 278 PR 279
PR
Sbjct: 271 PR 272
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 400 TTDQSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 458
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 459 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 508
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 490 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLA-TPLEIHGKPIEVKKAQ 548
Query: 278 PRTLQKPKKNSS 289
PR + +++++
Sbjct: 549 PRGNLRDEEDAA 560
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 122 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 180
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 181 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEQDFKQFFMQFGRVVDATLM 227
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 212 KQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SRPLEILGKPIEVKKAQ 270
Query: 278 PR 279
PR
Sbjct: 271 PR 272
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++FS+YGE+ D V+MK+ TG+ RGFGFVT+AD + V VI++ H LDGRT++ K P
Sbjct: 64 KHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIED-KHILDGRTVEIKRTIP 122
Query: 279 R--TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R T + PK K+F+GG+P+ +TE + + +F+++GKV E IM R+
Sbjct: 123 RGNTSKGPKTK----KIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRS 169
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
YFS++G+V + +M++ TGRSRGFGF+TF V +I Q L G+ ++ K P
Sbjct: 152 YFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEP 211
Query: 279 R 279
+
Sbjct: 212 K 212
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 119 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 177
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 178 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEHDFKEFFAQFGRVIDATLM 224
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G VID +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 209 KEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SGPLEICGKPIEVKKAQ 267
Query: 278 PR 279
PR
Sbjct: 268 PR 269
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|391330446|ref|XP_003739671.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Metaseiulus occidentalis]
Length = 193
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 78/119 (65%), Gaps = 5/119 (4%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YF +G++ DC V+ NE GRSRGFGFVT+ DP +V Q PH++D
Sbjct: 7 SWCTTKESLKAYFGVFGDIEDCTVV-TNEQGRSRGFGFVTYRDPCVAFIVCQRGPHSVDN 65
Query: 269 RTIDPKPCNP--RTLQKPKKNSS-FPKVFLGGLPSNVTETDLRTFFN-RYGKVMEVVIM 323
R +DPKPC P ++ P + FPK+F GGLP+ +TE +L TFF +YG V+EVVIM
Sbjct: 66 RVVDPKPCGPNGNHIKVPGRVMRPFPKIFTGGLPAFLTEDELSTFFKEKYGNVLEVVIM 124
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
A+ T + + +YG V++ V+M + E+ RSRGFGFVTF D V
Sbjct: 100 AFLTEDELSTFFKEKYGNVLEVVIMFDQESRRSRGFGFVTFQDEQVV 146
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 110 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 168
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 169 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEQDFKQFFMQFGRVVDATLM 215
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 200 KQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SRPLEILGKPIEVKKAQ 258
Query: 278 PR 279
PR
Sbjct: 259 PR 260
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 165 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 223
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 224 DPKRAIPRDEQERTS-----KIFVGGVSQEATEQDFKQFFMQFGRVVDATLM 270
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + ++GR RGFGFVTF V + + P + G+ I+ K
Sbjct: 255 KQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATL-SGPLEILGKPIEVKKAQ 313
Query: 278 PR 279
PR
Sbjct: 314 PR 315
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 116 TTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 174
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 175 DPKRAIPRDEQEKTS-----KIFVGGVSQEATEQEFKEFFTQFGRVIDATLM 221
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + +F+++G VID +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 203 QEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR-PLAICGKPIEVK 261
Query: 275 PCNPR 279
PR
Sbjct: 262 KAQPR 266
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%), Gaps = 14/128 (10%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS +GEVI+ V++K+ TGR+RGFGFV FADP +VI H +DG
Sbjct: 14 SWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE-KHNIDG 72
Query: 269 RTIDPKPCNPRTLQK--PKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYG 315
R ++ K PR Q + NSS K+F+GGLPS+VTE+D +T+F ++G
Sbjct: 73 RLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFG 132
Query: 316 KVMEVVIM 323
+VV+M
Sbjct: 133 TTTDVVVM 140
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 125 KTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAV 184
Query: 278 PRTL 281
P+ L
Sbjct: 185 PKEL 188
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%), Gaps = 14/128 (10%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS +GEVI+ V++K+ TGR+RGFGFV FADP +VI H +DG
Sbjct: 14 SWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE-KHNIDG 72
Query: 269 RTIDPKPCNPRTLQK--PKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYG 315
R ++ K PR Q + NSS K+F+GGLPS+VTE+D +T+F ++G
Sbjct: 73 RLVEAKKAVPRDDQNMVNRSNSSSIQGSPSGPGRTRKIFVGGLPSSVTESDFKTYFEQFG 132
Query: 316 KVMEVVIM 323
+VV+M
Sbjct: 133 TTTDVVVM 140
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 125 KTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAV 184
Query: 278 PRTLQ 282
P+ L
Sbjct: 185 PKELS 189
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H LD +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 133 TTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 191
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 192 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 241
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + + G+ I+ K
Sbjct: 223 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLA-AKLEIHGKPIEVKKAQ 281
Query: 278 PR 279
PR
Sbjct: 282 PR 283
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 116 TTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 174
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 175 DPKRAIPRDEQEKTS-----KIFVGGVSQEATEQEFKEFFTQFGRVIDATLM 221
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + +F+++G VID +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 203 QEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR-PLAICGKPIEVK 261
Query: 275 PCNPR 279
PR
Sbjct: 262 KAQPR 266
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 14/125 (11%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YFS +GEVI+ V++K+ TGR+RGFGFV FADP +VI H +DGR +
Sbjct: 17 TNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE-KHNIDGRLV 75
Query: 272 DPKPCNPRTLQK--PKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
+ K PR Q + NSS K+F+GGLPS+VTE+D +T+F ++G
Sbjct: 76 EAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTT 135
Query: 319 EVVIM 323
+VV+M
Sbjct: 136 DVVVM 140
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 125 KTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAV 184
Query: 278 PRTLQ 282
P+ L
Sbjct: 185 PKELS 189
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 119 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 177
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 178 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEHDFKEFFAQFGRVIDATLM 224
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G VID +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 209 KEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SGPLEICGKPIEVKKAQ 267
Query: 278 PR 279
PR
Sbjct: 268 PR 269
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQERTS-----KIFVGGVSQEATEQDFKQFFMQFGRVVDATLM 115
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + ++GR RGFGFVTF V + + P + G+ I+ K
Sbjct: 100 KQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATL-SGPLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%), Gaps = 14/128 (10%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS +GEVI+ V++K+ TGR+RGFGFV FADP +VI H +DG
Sbjct: 14 SWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE-KHNIDG 72
Query: 269 RTIDPKPCNPRTLQK--PKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYG 315
R ++ K PR Q + NSS K+F+GGLPS+VTE+D +T+F ++G
Sbjct: 73 RLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFG 132
Query: 316 KVMEVVIM 323
+VV+M
Sbjct: 133 TTTDVVVM 140
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 125 KTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAV 184
Query: 278 PRTL 281
P+ L
Sbjct: 185 PKEL 188
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 26/165 (15%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS +GEVI+ V++K+ TGR+RGFGFV FADP +VI H +DG
Sbjct: 14 SWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE-KHNIDG 72
Query: 269 RTIDPKPCNPRTLQK--PKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYG 315
R ++ K PR Q + NSS K+F+GGLPS+VTE+D +T+F ++G
Sbjct: 73 RLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFG 132
Query: 316 KVMEVVIMSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+VV+M + G ++E AV++VL ++
Sbjct: 133 TTTDVVVMYDHNTQRPRGFGFITYDSEE--------AVEKVLLKT 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 125 KTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAV 184
Query: 278 PRTLQ 282
P+ L
Sbjct: 185 PKELS 189
>gi|441630832|ref|XP_004089578.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
1 [Nomascus leucogenys]
Length = 489
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 168 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 227
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAGITRVPT 337
PR Q PK + K+F+GGL N T D++ +F ++GKV ++M +T
Sbjct: 228 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDHAMLMFDKTTNX------X 280
Query: 338 QELPVQKEATAVQQVLRRSSTTKVQAPFGATTLSPPNLTTPTGECR 383
+ P K A V + + +Q P + +PTG R
Sbjct: 281 RGFPGNKRANDSSSVGKTNRQVSLQVE--CKKAQPKEVMSPTGSAR 324
>gi|358339324|dbj|GAA47410.1| RNA-binding protein Musashi [Clonorchis sinensis]
Length = 957
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFSR+GEV D VVM +N+TGRSRGFG+V + +P +V + ++ PH LDG+ +D K CN
Sbjct: 29 YFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPESVTLALEAKPHILDGKEVDAKQCN-- 86
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM--SPRTIRAGITRVPT 337
+ +N KVF+GG+ + ++ +F ++G+V +V +M S + G V
Sbjct: 87 -VNMKGRNRRSLKVFVGGIGLDQDAESIKNYFRQFGRVTDVNLMMDSNKQRHRGFAFVGF 145
Query: 338 QELPVQKEATAVQQVLRRSSTTKVQAPFGATTLSPPNL 375
++ V K ++ V + +++A + PPN
Sbjct: 146 EDEAVVKRLISLHYVTMNNKQVEIKA------MEPPNF 177
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 165 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 223
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M +
Sbjct: 224 DPKRAIPRDEQERTS-----KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 273
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + ++GR RGFGFVTF V + + P + G+ I+ K
Sbjct: 255 KQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATL-SGPLEILGKPIEVKKAQ 313
Query: 278 PR 279
PR
Sbjct: 314 PR 315
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 197 GPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVG 256
G S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+ +
Sbjct: 51 GDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVID 110
Query: 257 VVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
V+++ H +DGRT++ K PR K K+F+GGLP+++TE +L+ F+ YGK
Sbjct: 111 KVLED-EHVIDGRTVEVKRTVPREEMNTKDGPKTRKIFIGGLPASLTEDELKDHFSLYGK 169
Query: 317 VMEVVIM 323
V+E IM
Sbjct: 170 VLEHQIM 176
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG+V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 163 HFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Query: 279 R 279
+
Sbjct: 223 K 223
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS +G+V +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGF+T+ADP+ V VI+ PH ++G+ +
Sbjct: 54 TIAQFI-KHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEE-PHVINGKQV 111
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K PR K + K+F+GG+PSNVTE + R FF RYG+V + IM +
Sbjct: 112 EIKRTIPRGAVGSKDFRT-KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHS 166
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
+F+RYGEV D +M+++ T RSRGFGF+TF V ++
Sbjct: 149 FFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLL 188
>gi|156230072|gb|AAI52222.1| Msi2b protein [Danio rerio]
Length = 168
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Query: 183 GGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSR 242
G + A PN S GK ++ T + YFS++GE+ +C+VM++ T RSR
Sbjct: 3 GDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSR 62
Query: 243 GFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNV 302
GFGFVTFAD +V V+ H LD +TIDPK PR Q PK + K+F+GGL +N
Sbjct: 63 GFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQ-PKMVTRTKKIFVGGLSANT 121
Query: 303 TETDLRTFFNRYGKVMEVVIMSPRT 327
D++ +F ++GKV + ++M +T
Sbjct: 122 VVEDVKQYFEQFGKVEDAMLMFDKT 146
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEHDFKEFFAQFGRVIDATLM 115
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G VID +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 100 KEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SGPLEICGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 38 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 186
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 187 PKEVMSP 193
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 118
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + + + G+ I+ K
Sbjct: 100 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-SANLEIHGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 216 YQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ + YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 165 WLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKV 224
Query: 276 CNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 225 AFPRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 275
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 250 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 309
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 310 ECKKAQPKEVMSP 322
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS +G+V +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS +G+V +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 73/117 (62%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV++ V+M++ TGR+RGFGFV FADP VI + H +DGRT++ K
Sbjct: 23 KEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIVD-KHMIDGRTVEAKKAV 81
Query: 278 PRTLQKP-KKNSS----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q +N+S K+F+GGL S VT+ D + +F ++G + +VV+M
Sbjct: 82 PRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDNDFKKYFEQFGNITDVVVM 138
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ + V V+ H L+G+ ++ K
Sbjct: 123 KKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E L+ +F++YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRT 42
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 19/133 (14%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + Q YF +YG++++ V+M++ TGR+RGFGF+ FADP+ VI + H +DG
Sbjct: 23 SWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD-KHIIDG 81
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP------------------KVFLGGLPSNVTETDLRTF 310
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +
Sbjct: 82 RTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNY 141
Query: 311 FNRYGKVMEVVIM 323
F+++G + +VV+M
Sbjct: 142 FDQFGTIADVVVM 154
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ YF ++G + D VVM ++ T R RGFGF+TF +V +V+ H L+G+ +
Sbjct: 134 TEAEFKN-YFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMV 192
Query: 272 DPKPCNPRTLQKPKKNSS 289
+ K P+ L N S
Sbjct: 193 EVKRAVPKELSSTTPNRS 210
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
QK + S K+F+GG+ + E L+ +F +YG ++E VIM RT
Sbjct: 6 QKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRT 51
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YF R+GEV +C+VM++ T R+RGFGF+TF DP++V V+ H LDG+ I
Sbjct: 45 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHARDHELDGKKI 104
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK P+ Q K + KVF+GGL + T D++ +F YGKV + ++M +
Sbjct: 105 DPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMYDK 158
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG+V D ++M + T R RGFGFVTF V + H ++G+ ++ K
Sbjct: 140 KQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ 199
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 200 PKEVMLP 206
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 38 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 186
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 187 PKEVMSP 193
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 110 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 169
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 170 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 218
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 193 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 252
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 253 ECKKAQPKEVMSP 265
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEHDFKEFFAQFGRVIDATLM 115
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G VID +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 100 KEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SGPLEICGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 19/133 (14%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + Q YF +YG++++ V+M++ TGR+RGFGF+ FADP+ VI + H +DG
Sbjct: 23 SWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD-KHIIDG 81
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP------------------KVFLGGLPSNVTETDLRTF 310
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +
Sbjct: 82 RTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNY 141
Query: 311 FNRYGKVMEVVIM 323
F+++G + +VV+M
Sbjct: 142 FDQFGTIADVVVM 154
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ YF ++G + D VVM ++ T R RGFGF+TF +V +V+ H L+G+ +
Sbjct: 134 TEAEFKN-YFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMV 192
Query: 272 DPKPCNPRTLQKPKKNSS 289
+ K P+ L N S
Sbjct: 193 EVKRAVPKELSSTTPNRS 210
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
QK + S K+F+GG+ + E L+ +F +YG ++E VIM RT
Sbjct: 6 QKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRT 51
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 19/133 (14%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + Q YF +YG++++ V+M++ TGR+RGFGF+ FADP+ VI + H +DG
Sbjct: 20 SWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD-KHIIDG 78
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP------------------KVFLGGLPSNVTETDLRTF 310
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +
Sbjct: 79 RTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNY 138
Query: 311 FNRYGKVMEVVIM 323
F+++G + +VV+M
Sbjct: 139 FDQFGTIADVVVM 151
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ YF ++G + D VVM ++ T R RGFGF+TF +V +V+ H L+G+ +
Sbjct: 131 TEAEFKN-YFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMV 189
Query: 272 DPKPCNPRTLQKPKKNSS 289
+ K P+ L N S
Sbjct: 190 EVKRAVPKELSSTTPNRS 207
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
QK + S K+F+GG+ + E L+ +F +YG ++E VIM RT
Sbjct: 3 QKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRT 48
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 19/133 (14%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + Q YF +YG++++ V+M++ TGR+RGFGF+ FADP+ VI + H +DG
Sbjct: 20 SWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD-KHIIDG 78
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP------------------KVFLGGLPSNVTETDLRTF 310
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +
Sbjct: 79 RTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNY 138
Query: 311 FNRYGKVMEVVIM 323
F+++G + +VV+M
Sbjct: 139 FDQFGTIADVVVM 151
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ YF ++G + D VVM ++ T R RGFGF+TF +V +V+ H L+G+ I
Sbjct: 131 TEAEFKN-YFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMI 189
Query: 272 DPKPCNPRTLQKPKKNSS 289
+ K P+ L N S
Sbjct: 190 EVKRAVPKELSSTTPNRS 207
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
QK + S K+F+GG+ + E L+ +F +YG ++E VIM RT
Sbjct: 3 QKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRT 48
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 165 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 223
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ TE D + FF ++G+V++ +M +
Sbjct: 224 DPKRAIPRDEQERT-----SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 273
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + ++GR RGFGFVTF V + + P + G+ I+ K
Sbjct: 255 KQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATL-SGPLEILGKPIEVKKAQ 313
Query: 278 PR 279
PR
Sbjct: 314 PR 315
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV++ V+MK+ TGR+RGFGFV F+DP +VI+ H +DGR ++ K
Sbjct: 23 REYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAIAEIVIKE-KHNIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVM 138
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+ + E LR +F+ YG+V+E VIM RT
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRT 42
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 161 NNWNWNMPQ---NGPTTPAAGGPPAGGATGAAPTGP-NPSGPSAGKPPADYS-------A 209
NWNW + + +G + G G N G+ D +
Sbjct: 148 KNWNWFLEEPSKDGEDDEVSEKKEKKGTRGKRKQAEGNDDDDWMGESDEDKEKLFVGGIS 207
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + YFS YGE+ D V+M + TGR RGFGF+TFADP V++ H +DGR
Sbjct: 208 WETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE-DHVIDGR 266
Query: 270 TIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
++ K PR + + S K+F+GG+PS++TE +L+ +F+ YG ++E IM
Sbjct: 267 AVEVKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIM 320
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
YFS YG +++ +M ++ TGRSRGFGFVTF + V + + H L G+ ++ K P
Sbjct: 307 YFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEP 366
Query: 279 R 279
+
Sbjct: 367 K 367
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 4 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 63
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 64 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 112
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 93 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 152
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 153 PKEVMSP 159
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 21 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 79
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 80 DPKRAIPRDEQEKTS-----KIFVGGVSQEATEQEFKEFFTQFGRVIDATLM 126
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + +F+++G VID +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 108 QEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR-PLAICGKPIEVK 166
Query: 275 PCNPR 279
PR
Sbjct: 167 KAQPR 171
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEQDFKQFFMQFGRVVDATLM 115
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 100 KQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-SRPLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 172 PTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCV 231
PT P + P G G P P GK ++ T + + +F R+GE+ + +
Sbjct: 5 PTNPQS--PTNGSLDGDVPNDP-------GKMFIGGLSWQTTVESLKDHFGRFGEIKEAM 55
Query: 232 VMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFP 291
VMK+ T RSRGFGFVT+ DP +V ++N PH LD +T+DPK PR Q PK +
Sbjct: 56 VMKDPTTKRSRGFGFVTYKDPASVDTCLENGPHILDNKTVDPKVAFPRKAQ-PKMVTRTK 114
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T D++ +F++YGK+ + ++M +T
Sbjct: 115 KIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKT 150
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 211 GTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRT 270
T + + YFS+YG++ D ++M + T R RGFGFVTF + + V V + H ++ +
Sbjct: 124 ATTVEDVKNYFSQYGKIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINKKM 183
Query: 271 IDPKPCNPRTLQKP 284
++ K P+ + P
Sbjct: 184 VECKKAQPKEVMLP 197
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 41 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 100
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 101 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 149
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 130 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 189
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 190 PKEVMSP 196
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 123 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 181
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ + E D + FF ++G+V++ +M
Sbjct: 182 DPKRAIPRDEQERTS-----KIFVGGVSQDANEQDFKKFFMQFGRVVDATLM 228
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 213 KKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACL-SQPLEILGKPIEVKKAQ 271
Query: 278 PR 279
PR
Sbjct: 272 PR 273
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 16/150 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV++ V+MK+ T R+RGFGFV FADP V+ + HT+DGRT++ K
Sbjct: 23 KDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIADRVVLD-KHTIDGRTVEAKKAI 81
Query: 278 PRTLQKP-KKNSSF----------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ +NS+ K+F+GGL VTE D R +F ++G + +VV+M
Sbjct: 82 PRDDQQHMNRNSNIAHAPPSQVRTKKIFVGGLAPTVTENDFRKYFEQFGTITDVVVMYDH 141
Query: 327 TIRAGITRVPTQELPVQKEATAVQQVLRRS 356
+ + R AV QVL+++
Sbjct: 142 STQ----RPRGFGFITYDSEDAVDQVLQKT 167
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ + V V+Q H L+G+ ++ K
Sbjct: 123 RKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVEVKRAV 182
Query: 278 PRTL 281
P+ L
Sbjct: 183 PKEL 186
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 287 NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
+S K+F+GG+ TE L+ +F R+G+V+E VIM RT R
Sbjct: 2 DSEKGKLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTR 44
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 120 TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 180 ECKKAQPKEVMSP 192
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 120 TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 180 ECKKAQPKEVMSP 192
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 120 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 180 ECKKAQPKEVMSP 192
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 38 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 127 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 186
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 187 PKEVMSP 193
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 16 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 124
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 105 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 164
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 165 PKEVMSP 171
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ E D ++FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQEANEQDFKSFFMQFGRVVDATLM 115
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + +TGR RGFGFVTF V + P + G+ I+ K PR
Sbjct: 102 FFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR-PLEILGKPIEVKKAQPR 160
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 37 TTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKII 95
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q +K S K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 96 DPKRAIPRDEQ--EKTS---KIFVGGVSQEATEQDFKQFFMQFGRVVDATLM 142
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + P + G++I+ K
Sbjct: 127 KQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSR-PLEILGKSIEVKKAQ 185
Query: 278 PR 279
PR
Sbjct: 186 PR 187
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
Query: 170 NGPTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVID 229
N T + G G ++G + T + S P+ GK ++ T ++ YF +G+V D
Sbjct: 72 NAATNTSKAGSTNGSSSGRS-TPNSSSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTD 130
Query: 230 CVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS 289
++MK+ T RSRGFGF+TF +PN+V V++ HTLDG+ IDPK P+ K + N +
Sbjct: 131 VLIMKDPITQRSRGFGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATPKNRPKTQSNKT 190
Query: 290 FPKVFLGGLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
K+F+GG+ + + ++R +F+++GKV E V++M +T R
Sbjct: 191 -KKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKR 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ ++YFS++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 202 TSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 261
Query: 272 DPKPCNPRTLQKPKKNSSFPK-VFLGGL 298
+ K P+ P K + LG L
Sbjct: 262 ECKKAQPKEAVTPTAQQLLQKRIILGNL 289
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 126 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 186 PKEVMSP 192
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVK-EHFLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKT-----SKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDK 118
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G V+D +M + +TGR RGFGFVTF V + + + G+ I+ K PR
Sbjct: 102 YFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-STSLEIHGKPIEVKKAQPR 160
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 145
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 120 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 180 ECKKAQPKEVMSP 192
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 55 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 114
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 115 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 138 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 197
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 198 ECKKAQPKEVMSP 210
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 4 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 63
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 64 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 112
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 93 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 152
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 153 PKEVMSP 159
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV++C VM+++ +G+SRGFGF+TF DP V V+ H LDG+ IDPK PR
Sbjct: 18 YFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMAK-EHYLDGKIIDPKRAIPR 76
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ S+VTE D + FF +YG V++ +M
Sbjct: 77 EEQDKT-----SKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLM 115
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Y+Q +F +YG VID +M + ++GR RGFGFVTF + ++ L + I
Sbjct: 95 TEEDYKQ-FFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQAMNTILAQPLLILKDKPI 153
Query: 272 DPKPCNPRT 280
+ K R+
Sbjct: 154 EVKRAENRS 162
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 4 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 63
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 64 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 112
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 93 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 152
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 153 PKEVMSP 159
>gi|355564741|gb|EHH21241.1| hypothetical protein EGK_04258 [Macaca mulatta]
Length = 324
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 18 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 77
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRA----GIT 333
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T G
Sbjct: 78 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 136
Query: 334 RVPTQELPVQKEATAVQQV---LRRSSTTKVQAPFGATTLSPPNLTTPTGECR 383
++++ + ++ + R + P P + +PTG R
Sbjct: 137 TFESEDIVEKVCEIHFHEINNKMVRWDRVQWLTPVECKKAQPKEVMSPTGSAR 189
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 28/156 (17%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +YG+V+ VVMK+ TGR RGFGFV FADP + +V+Q+ HT+DGR ++ K R
Sbjct: 25 YFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADPAVLDMVLQD-KHTIDGRMVEAKRALSR 83
Query: 280 TLQK---------PKKNSS------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
Q+ P +N+S K+F+GGLP +TE R +F +G V +VVIM
Sbjct: 84 EEQQTNARAGNLNPARNTSGGGNIRTKKIFVGGLPPTLTEDGFRQYFEAFGFVADVVIMY 143
Query: 325 PRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
++ + G T++ AV +VL+RS
Sbjct: 144 DQSTQRPRGFGFISFDTED--------AVDRVLQRS 171
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D V+M + T R RGFGF++F + V V+Q H L+G+ ++ K
Sbjct: 127 RQYFEAFGFVADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQRSFHDLNGKQVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 16/130 (12%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A+ T + + YFS++GEVI V+M++ TGR RGFGFV F+DP+ + V+Q+ HT+DG
Sbjct: 14 AWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQD-KHTIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSSF---------------PKVFLGGLPSNVTETDLRTFFNR 313
R ++ K R Q+ S K+F+GGLPS +TE R +F
Sbjct: 73 RQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALTEDGFRQYFES 132
Query: 314 YGKVMEVVIM 323
YG+V +VVIM
Sbjct: 133 YGQVTDVVIM 142
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG+V D V+M + T R RGFGF+TF + + V V+ H L+G+ ++ K
Sbjct: 127 RQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRAL 186
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRY 314
P+ P G +N D R+ NRY
Sbjct: 187 PKDA-NPGSGGRAGYQNYGASGTNSNSFDGRSDGNRY 222
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 35 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 94
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 95 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 143
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 118 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 177
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 178 ECKKAQPKEVMSP 190
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQEATEQEFKGFFMQFGRVVDATLM 115
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + +TGR RGFGFVTF V + P + G+ I+ K PR
Sbjct: 102 FFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENALSR-PLAICGKPIEVKKAQPR 160
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 27 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 86
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 87 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 135
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 116 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 175
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 176 PKEVMSP 182
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 19/133 (14%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + Q YF +YG++++ V+M++ TGR+RGFGF+ FADP+ VI + H +DG
Sbjct: 16 SWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD-KHIIDG 74
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP------------------KVFLGGLPSNVTETDLRTF 310
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +
Sbjct: 75 RTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNY 134
Query: 311 FNRYGKVMEVVIM 323
F+++G + +VV+M
Sbjct: 135 FDQFGTIADVVVM 147
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 173 TTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVV 232
+P+ GG G T G PS T A+++ YF ++G + D VV
Sbjct: 101 ISPSHGGNGGGARTKKIFVGGLPSSI-------------TEAEFKN-YFDQFGTIADVVV 146
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS 289
M ++ T R RGFGF+TF +V +V+ H L+G+ ++ K P+ L N S
Sbjct: 147 MYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRS 203
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV + V+MK+ TGR+RGFGFV F DP +V+Q H +DGR ++ K
Sbjct: 6 REYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE-KHNIDGRMVEAKKAV 64
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 65 PRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDH 124
Query: 327 TIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+ G ++E AV QVL ++
Sbjct: 125 NTQRPRGFGFITYDSEE--------AVDQVLLKT 150
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 106 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAV 165
Query: 278 PRTLQ 282
P+ L
Sbjct: 166 PKELS 170
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVK-EHFLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKT-----SKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDK 118
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G V+D +M + +TGR RGFGFVTF V + + + G+ I+ K PR
Sbjct: 102 YFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACL-STSLEIHGKPIEVKKAQPR 160
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YGEV++ V+M++ TGR+RGFGFV FAD VI H +DGRT++ K
Sbjct: 23 KEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME-KHVIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNS-----------SFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q S K+F+GGL S VTE + + +F +YG +++VV+M
Sbjct: 82 PRDDQHILSRSISNIHGSPGPGRTKKIFVGGLASTVTENEFKKYFEQYGIIIDVVVM 138
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +YG +ID VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Query: 199 SAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVV 258
S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+ + V
Sbjct: 63 SSGKIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 122
Query: 259 IQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
+++ H +DGRT++ K PR K K+F+GGLP++++E DLR F+ YGKV+
Sbjct: 123 LED-EHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKVV 181
Query: 319 EVVIM 323
E IM
Sbjct: 182 EHQIM 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG+V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 173 HFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 232
Query: 279 R 279
+
Sbjct: 233 K 233
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKT-----SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 118
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + + G+ I+ K
Sbjct: 100 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLA-ANLEIHGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV + V+MK+ TGR+RGFGFV F DP +V+Q H +DGR ++ K
Sbjct: 23 REYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE-KHNIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDH 141
Query: 327 TIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+ G ++E AV QVL ++
Sbjct: 142 NTQRPRGFGFITYDSEE--------AVDQVLLKT 167
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+ + E LR +F+ YG+V E VIM RT
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRT 42
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ +GRSRGFGF+TF D V VV+ H LDG+ I
Sbjct: 113 TTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVK-EHYLDGKII 171
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ +E D + +F ++G+V++ +M +
Sbjct: 172 DPKRAIPRDEQERTS-----KIFVGGVSQEASELDFKEYFMQFGRVVDATLMMDK 221
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V+D +M + +TGR RGFGFVTF V I N P + G+ I+ K
Sbjct: 203 KEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACI-NIPLEILGKPIEVKKAQ 261
Query: 278 PR 279
PR
Sbjct: 262 PR 263
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 185 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 244
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 245 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 293
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 268 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 327
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 328 ECKKAQPKEVMSP 340
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV++ V+M++ TGR+RGFGF+ FADP VI H +DGR ++ K
Sbjct: 23 REYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME-KHMIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKN-----------SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ S K+F+GGL S V E D RT+F ++G + +VV+M
Sbjct: 82 PRDDQQALSKSGGSTHGSPGPSRTKKIFVGGLASTVNEADFRTYFEQFGTITDVVVM 138
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G + D VVM ++ T R RGFGF+T+ V + H L+G+ ++ K P+
Sbjct: 125 YFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALFKTFHELNGKMVEVKRAVPK 184
Query: 280 TL 281
L
Sbjct: 185 EL 186
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+F+GG+ + E LR +F +YG+V+E VIM R
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDR 41
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 130 TTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKII 188
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 189 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 238
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF + V I N P + G+ I
Sbjct: 214 TTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI-NVPLEIHGKPI 272
Query: 272 DPKPCNPRTLQKPKKNSS 289
+ K PR + ++ +S
Sbjct: 273 EVKKAQPRGNLREEEEAS 290
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+ YGEVI+ V+M++ TGR+RGFGFV F+DP VI + H +DGRT++ K
Sbjct: 23 KEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID-KHIIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ + K+F+GGLPS +TE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMYFDQFGTITDVVVM 138
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS +GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 25 TTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 83
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 84 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 133
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + + + G+ I+ K
Sbjct: 115 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-SANLEIHGKPIEVKKAQ 173
Query: 278 PR-TLQKPKKNS 288
PR L++ ++N+
Sbjct: 174 PRGNLREEEENN 185
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF++YGEVID +M++N TG+SRGFGF+TF DP +V VI+ H LDG+ IDPK R
Sbjct: 105 YFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIK-TDHILDGKLIDPKRAIAR 163
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E D FF+++G +++ +M
Sbjct: 164 EEQ-----DKVGKIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLM 202
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + +TGRSRGFGF+T+ P+ V V N TL G++++ K PR
Sbjct: 189 FFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAEPR 248
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV +C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK PR
Sbjct: 106 YFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMVK-EHYLDGKIIDPKRAIPR 164
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q+ K+F+GG+ TE D FF ++G+V++ +M
Sbjct: 165 EEQERTS-----KIFVGGVSQEATEEDFTAFFKQFGRVVDATLM 203
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + ETGR RGFGFVTF V ++ P + G+ I+ K PR
Sbjct: 190 FFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLKG-PLQILGKPIEVKRAQPR 248
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YF R+GEV +C+VM++ T R+RGFGF+TF DP++V V+ H LDG+ I
Sbjct: 52 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNAREHELDGKKI 111
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK P+ Q K + KVF+GGL + T DL+ +F YGKV + ++M +
Sbjct: 112 DPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTLEDLKQYFETYGKVEDAMLMYDK 165
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
SA T +Q YF YG+V D ++M + T R RGFGFVTF V + H ++
Sbjct: 138 SATSTLEDLKQ-YFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEIN 196
Query: 268 GRTIDPKPCNPRTLQKP 284
G+ ++ K P+ + P
Sbjct: 197 GKMVECKKAQPKEVMLP 213
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GE+ +C+VM++ T RSRGFGF+TFAD ++V V+ H LD +TIDPK
Sbjct: 38 RDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL ++ D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKT 146
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ +GRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ + T+ + R +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKTS-----KIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDK 118
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V I N P + G+ I
Sbjct: 94 TTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACI-NVPLEIHGKPI 152
Query: 272 DPKPCNPRTLQKPKKNSS 289
+ K PR + ++ +S
Sbjct: 153 EVKKAQPRGNLREEEEAS 170
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ + E D + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQERTS-----KIFVGGVSQDANEQDFKKFFMQFGRVVDATLM 115
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 100 KKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ-PLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKT-----SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 118
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G V+D +M + +TGR RGFGFVTF V + + + G+ I+ K
Sbjct: 100 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-SANLEIHGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ +GRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ TE D + +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQERTS-----KIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDK 118
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 100 KEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACL-DSPLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
PN P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TFA+P
Sbjct: 47 PNGGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEP 106
Query: 253 NNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+V V++ CP HTLDG+ IDPK P+ + K+ + K+F+GG+ + + +++ +F
Sbjct: 107 GSVDKVLK-CPIHTLDGKKIDPKHATPKN--RAKQANRTKKIFVGGVSQDTSSEEVKAYF 163
Query: 312 NRYGKVME-VVIMSPRTIR 329
N++GKV E V++M +T R
Sbjct: 164 NQFGKVEETVMLMDQQTKR 182
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ + YF+++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 154 TSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 213
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ +P + +V LG L
Sbjct: 214 ECKKAQPKEAVQPGALALGKRVVLGAL 240
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 21 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK-EHYLDGKII 79
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ + E D + FF ++G+V++ +M
Sbjct: 80 DPKRAIPRDEQERTS-----KIFVGGVSQDANEQDFKKFFMQFGRVVDATLM 126
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 111 KKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ-PLEILGKPIEVKKAQ 169
Query: 278 PR 279
PR
Sbjct: 170 PR 171
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FADP V+ H +DGR ++ K
Sbjct: 23 KEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME-KHLIDGRNVEAKKAV 81
Query: 278 PRTLQKP-KKNSS----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q KNSS K+F+GGL S VTE+D R +F+++G + +VV+M
Sbjct: 82 PREDQNTLNKNSSSVNGSPGPARTKKIFVGGLASTVTESDFRKYFDQFGVITDVVVM 138
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 RKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRY 314
P+ L P +N LGG N + + + +F N Y
Sbjct: 183 PKELSPGPARNQ------LGGF--NYSPSRVSSFLNGY 212
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV +C VM+++ TGRSRGFGF+TF D V V+ H LDG+ IDPK PR
Sbjct: 18 YFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVK-EHYLDGKIIDPKRAIPR 76
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q+ K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 77 DEQEKTS-----KIFVGGVSQEATEQDFKQFFMQFGRVVDATLM 115
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 100 KQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKAL-SRPLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Query: 185 ATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGF 244
A + + PN + GK ++ T + + YFS++GE+ + +VMK+ T RSRGF
Sbjct: 6 AVQSNSSSPNEAAHDPGKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGF 65
Query: 245 GFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTE 304
GFVTFADP +V V+ N PH LDG+ IDPK P+ PK + KVF+GGL + T
Sbjct: 66 GFVTFADPASVEKVLANGPHELDGKKIDPKIAFPKRAH-PKMVTRTKKVFVGGLSAPTTL 124
Query: 305 TDLRTFFNRYGKVMEVVIM 323
D++ +F ++G++ + ++M
Sbjct: 125 EDVKNYFQQFGRIEDAMLM 143
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 128 KNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDKVCEVHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMMP 194
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGF+T+ADP+ V VI++ H ++G+ +
Sbjct: 56 TIAQFI-KHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDT-HIINGKQV 113
Query: 272 DPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K PR K+ K+F+GG+PS VTE + R FF RYG+V + IM +
Sbjct: 114 EIKRTIPRGAAGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHS 170
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTF------ADPNNVGVVIQNCPHTLDGRTI 271
+ +F+RYGEV D +M+++ T RSRGFGF+T+ D +VG I+ ++ +
Sbjct: 151 RDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKA 210
Query: 272 DPKPCNP 278
+PK NP
Sbjct: 211 EPKKPNP 217
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV++C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK
Sbjct: 242 RNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMVK-EHYLDGKIIDPKRAI 300
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ K+F+GG+ T+ + R +F+++G+V++ +M +
Sbjct: 301 PRDEQEKTS-----KIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDK 344
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++G V+D +M + +TGR RGFGFVTF V + N L G+ I+ K
Sbjct: 326 REYFSQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-NAKLELHGKPIEVKKAQ 384
Query: 278 PR 279
PR
Sbjct: 385 PR 386
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV++C VM++ +GRSRGFGF+TF D V +V+ H LDG+ IDPK
Sbjct: 16 KEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVK-EHYLDGKIIDPKRAI 74
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ K+F+GG+ TE D + +F ++G+V++ +M
Sbjct: 75 PRDEQERTS-----KIFVGGVSQEATEQDFKQYFMQFGRVVDATLM 115
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G V+D +M + +TGR RGFGFVTF V ++ P + G+ I+ K
Sbjct: 100 KQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEG-PLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FADP V + H +DGR ++ K
Sbjct: 28 RDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADP-AVAERVTMDKHMIDGRMVEAKKAV 86
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR K N+S K+F+GGLPSNVTE D R +F ++G + +VV+M
Sbjct: 87 PRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFRRYFEQFGVITDVVVM 143
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 128 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAV 187
Query: 278 PR 279
P+
Sbjct: 188 PK 189
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 13/118 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS +GEV++ V+MK+ TGR+RGFGFV FADP V+ HT+DGR ++ K
Sbjct: 23 RKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE-KHTIDGRMVEAKKAV 81
Query: 278 PR-TLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q KNSS K+F+GGL S +TE D + +F+++G + +VV+M
Sbjct: 82 PRDDHQFLNKNSSSSIHGSPVPGHTKKIFVGGLSSTITEGDFKKYFDQFGTITDVVVM 139
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ + V V+ N H L+G+ ++ K
Sbjct: 124 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVKRAV 183
Query: 278 PR 279
P+
Sbjct: 184 PK 185
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+ + E LR +F+ +G+V+E VIM RT
Sbjct: 7 KLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRT 42
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 77/117 (65%), Gaps = 3/117 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGF+T+ADP+ V VI++ H ++G+ +
Sbjct: 54 TIAQFI-KHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDT-HIINGKQV 111
Query: 272 DPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K PR + K+ K+F+GG+PS VTE + R FF RYG+V + IM +
Sbjct: 112 EIKRTIPRGAVGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHS 168
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTF------ADPNNVGVVIQNCPHTLDGRTIDP 273
+F+RYGEV D +M+++ T RSRGFGF+T+ D +VG I+ ++ + +P
Sbjct: 151 FFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEP 210
Query: 274 KPCNP 278
K NP
Sbjct: 211 KKPNP 215
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 199 SAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVV 258
S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+ + V
Sbjct: 60 SSGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 119
Query: 259 IQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
+++ H +DGRT++ K PR K K+F+GGLPS +TE DLR F+ YG V+
Sbjct: 120 LED-EHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVV 178
Query: 319 EVVIM 323
E IM
Sbjct: 179 EHQIM 183
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 170 HFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 229
Query: 279 R 279
+
Sbjct: 230 K 230
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 199 SAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVV 258
S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+ + V
Sbjct: 60 SSGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 119
Query: 259 IQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
+++ H +DGRT++ K PR K K+F+GGLPS +TE DLR F+ YG V+
Sbjct: 120 LED-EHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVV 178
Query: 319 EVVIM 323
E IM
Sbjct: 179 EHQIM 183
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 170 HFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 229
Query: 279 R 279
+
Sbjct: 230 K 230
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 84/139 (60%), Gaps = 14/139 (10%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YFS+YGE+ D V+MK+ TG RGFGFVT+ADP+ V VI++ H +DG+ ++ K P
Sbjct: 69 KYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKD-KHFIDGKMVEIKRTIP 127
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP----RTIRAGITR 334
R K K+F+GG+P+++TE + + +F+++GKV+E IM R+ G
Sbjct: 128 RG-NAATKGPKTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVT 186
Query: 335 VPTQELPVQKEATAVQQVL 353
++E AV+++L
Sbjct: 187 FDSEE--------AVEEIL 197
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQN---CPHTLDGRTIDPK 274
+ YFS++G+V++ +M+++ TGRSRGFGFVTF V ++ + C L G+ ++ K
Sbjct: 156 KDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCE--LGGKQVEIK 213
Query: 275 PCNPR 279
P+
Sbjct: 214 KAEPK 218
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 16 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 76 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKT 124
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 105 KHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 164
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 165 PKEVMSP 171
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+FS+YGE++D +MK+N TGRSRGFGF+TF DP +V ++++ H LDG+ IDPK
Sbjct: 161 EHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKDR-HILDGKLIDPK---- 215
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R + K + K+F+GG+ VTE + FF+++GK+++ +M
Sbjct: 216 RAISK-EDQEKVGKIFIGGIDPMVTEQEFDEFFSQFGKIIDCQLM 259
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+FS++G++IDC +M + +TGRSRGFGF+T+ P V V N TL G+ ++ K P
Sbjct: 245 EFFSQFGKIIDCQLMIDKDTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAMEVKRAAP 304
Query: 279 R 279
R
Sbjct: 305 R 305
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV++ V+MK+ TGR+RGFGFV FADP VI+ H +DGR ++ K
Sbjct: 23 KDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE-KHNIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSSFP-----------KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAITDVVVM 138
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E L+ +F+ YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRT 42
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ D +MK+N TGRSRGFGF+TF DP+ V VVI+ H LDG+ IDPK R
Sbjct: 190 YFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ-DHILDGKLIDPKRAISR 248
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V+E + FF+++G +++ +M
Sbjct: 249 EDQ-----DRVGKIFIGGIDPMVSENEFNDFFSKFGTIIDCQLM 287
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +IDC +M + +TGRSRGFGF+TF P+ V V N TL G+ ++ K PR
Sbjct: 274 FFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKFLTLKGKAMEVKRAAPR 333
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 26/156 (16%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G+V++ V+MK+ TGR+RGFGFV FADP+ V+ H +DGRT++ K
Sbjct: 62 RQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME-KHVIDGRTVEAKKAV 120
Query: 278 PRTLQK--PKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
PR Q + NSS K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 121 PRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMY 180
Query: 325 PRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+ G ++E AV++VL ++
Sbjct: 181 DHNTQRPRGFGFITYDSEE--------AVEKVLHKT 208
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 164 KNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAV 223
Query: 278 PRTL 281
P+ L
Sbjct: 224 PKDL 227
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YF +YGE+ D V+MK+ TGR RGFGF+T+ADP+ V VIQ H ++G+ ++ K P
Sbjct: 36 KYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQEN-HVVNGKQVEIKRTIP 94
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
+ + + K+F+GG+P++V+E +L+ FF++YGKV+E I+ T +
Sbjct: 95 KGSSQANDFKT-KKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTK 144
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +FS+YG+V++ +++++ T RSRGFGF+ F V ++ + + G ++ K
Sbjct: 123 KNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKA 182
Query: 277 NPRTLQKP 284
P+ P
Sbjct: 183 EPKKSSNP 190
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV++ V+MK+ TGR+RGFGFV FADP VI+ H +DGR ++ K
Sbjct: 23 KDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE-KHNIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAITDVVVM 138
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAV 182
Query: 278 PRTL 281
P+ L
Sbjct: 183 PKEL 186
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E L+ +F+ YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRT 42
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YF R+GEV +C+VM++ T R+RGFGF+TF +P++V V+ H LDG+ I
Sbjct: 53 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSVDKVLNARDHELDGKKI 112
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK P+ Q K + KVF+GGL + T D++ +F YGKV + ++M +
Sbjct: 113 DPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTLEDMKQYFESYGKVEDAMLMYDK 166
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG+V D ++M + T R RGFGFVTF V + H ++G+ ++ K
Sbjct: 148 KQYFESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ 207
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 208 PKEVMLP 214
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F +YG + D V+MK+ T RGFGFVTF+DP+ + V+++ H +DGRT++ K P
Sbjct: 63 KHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED-EHNIDGRTVEVKRTVP 121
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R K K+F+GGLP++++E DLR F+ YGKV+E IM
Sbjct: 122 REEMSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIM 166
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG+V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 153 HFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 212
Query: 279 R 279
+
Sbjct: 213 K 213
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+A+ V V+ H LD +TIDPK
Sbjct: 39 KEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 99 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 147
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 128 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMTP 194
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+ D V V+ H LD +TIDPK
Sbjct: 39 KEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQNRHELDSKTIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRV 335
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T G V
Sbjct: 99 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFV 157
Query: 336 PTQELPVQKEATAVQQVLRRSSTTKVQAPFGATTLSPPNLTTPTGECR 383
+ V ++ + + V+ P + TPTG R
Sbjct: 158 TFENEDVVEKVCEIH--FHEINNKMVECK----KAQPKEVMTPTGSAR 199
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q++F +YGE+ID V+MKN T + RGFGF+T+ADP V V+++ H ++G+ ++ K
Sbjct: 39 QKHFGQYGEIIDSVIMKNKHTSQPRGFGFITYADPAVVDHVMEDS-HVINGKQVEIKRTI 97
Query: 278 PR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
P+ ++Q ++ K+F+GGLPS +TE D + FF +YG V++ IM R
Sbjct: 98 PKDSMQSNPRDFKTKKIFVGGLPSTLTEDDFKDFFEKYGTVVDHQIMRDHQTR 150
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +F +YG V+D +M++++T RSRGFGFV F V ++ N L G ++ K
Sbjct: 129 KDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANGNMIDLAGSKVEIKKA 188
Query: 277 NPRTLQKP 284
P+ P
Sbjct: 189 EPKKSSNP 196
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV +C VM+++ TGRSRGFGF+TF D V V+ H LDG+ IDPK PR
Sbjct: 16 YFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVK-EHYLDGKIIDPKRAIPR 74
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q+ K+F+GG+ TE D + FF ++G+V++ +M
Sbjct: 75 DEQEKTS-----KIFVGGVSQEATEQDFKQFFMQFGRVVDATLM 113
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + + P + G+ I+ K
Sbjct: 98 KQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKAL-SRPLEILGKPIEVKKAQ 156
Query: 278 PR 279
PR
Sbjct: 157 PR 158
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ +GRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQERTS-----KIFVGGVSQEATEQEFKQFFMQFGRVVDATLM 115
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
S T +++Q +F ++G V+D +M + +TGR RGFGFVTF V + + P +
Sbjct: 91 SQEATEQEFKQ-FFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATL-SVPLEIH 148
Query: 268 GRTIDPKPCNPR 279
G+ I+ K PR
Sbjct: 149 GKAIEVKKAQPR 160
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+A+ V V+ H LD +TIDPK
Sbjct: 39 KEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 99 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 147
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 128 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMTP 194
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FADP V + H +DGR ++ K
Sbjct: 30 RDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADP-AVAERVTMDKHMIDGRMVEAKKAV 88
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR K N+S K+F+GGLPSNVTE D R +F ++G + +VV+M
Sbjct: 89 PRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFRRYFEQFGVITDVVVM 145
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 130 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAV 189
Query: 278 PR 279
P+
Sbjct: 190 PK 191
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 12/126 (9%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YF YGEV++ V+M++ TGR+RGFGFV FADP VI + H +DG
Sbjct: 14 SWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVILD-KHVIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKV 317
RT++ K P+ Q SS K+F+GGL S VTE D + +F+++G +
Sbjct: 73 RTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEADFQKYFDQFGTI 132
Query: 318 MEVVIM 323
+VV+M
Sbjct: 133 TDVVVM 138
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q+YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 QKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKRAI 182
Query: 278 PRTL 281
P+ L
Sbjct: 183 PKEL 186
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E LR +F YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRT 42
>gi|334327187|ref|XP_001376854.2| PREDICTED: hypothetical protein LOC100026140 [Monodelphis
domestica]
Length = 1549
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
A+ + YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TI
Sbjct: 493 VVAEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTI 552
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
DPK PR Q PK + K+F+GGL N T D++ +F ++GKV
Sbjct: 553 DPKVAFPRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 597
>gi|148687912|gb|EDL19859.1| Musashi homolog 1(Drosophila) [Mus musculus]
Length = 280
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 4 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 63
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 64 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKT 112
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 93 KHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 152
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 153 PKEVMSP 159
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 25/151 (16%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +GEV++ V+MK+ TGR+RGFGF+ FADPN V+ H +DG+ ++ K PR
Sbjct: 25 YFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERVVL-LRHVIDGKLVEAKKAVPR 83
Query: 280 TLQKPKKNSSF----------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTI 328
K NSS K+F+GGL S+VTE + + +F ++G + +VV+M RT
Sbjct: 84 --DDHKSNSSLQGSSPGPANSKKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDQRTQ 141
Query: 329 R---AGITRVPTQELPVQKEATAVQQVLRRS 356
R G +++ AV +VLRR+
Sbjct: 142 RPRGFGFISYESED--------AVDRVLRRT 164
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ +YF+++G + D VVM + T R RGFGF+++ + V V++ H L+G+ +
Sbjct: 115 TEAEFK-KYFAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMV 173
Query: 272 DPKPCNPR 279
+ K P+
Sbjct: 174 EVKLAVPK 181
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+ TE LR +F +G+V+E VIM R+
Sbjct: 7 KLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRS 42
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 16/130 (12%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS YG+V++ V+M++ TGR+RGFGF+ FADP VI + H +DG
Sbjct: 14 SWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD-KHIIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP---------------KVFLGGLPSNVTETDLRTFFNR 313
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +F++
Sbjct: 73 RTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQ 132
Query: 314 YGKVMEVVIM 323
+G + +VV+M
Sbjct: 133 FGTIADVVVM 142
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+TF + V V+ H L+G+ ++ K
Sbjct: 127 KNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAV 186
Query: 278 PRTLQ 282
P+ +
Sbjct: 187 PKEIS 191
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 16/130 (12%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS YG+V++ V+M++ TGR+RGFGF+ FADP VI + H +DG
Sbjct: 14 SWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD-KHIIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP---------------KVFLGGLPSNVTETDLRTFFNR 313
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +F++
Sbjct: 73 RTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQ 132
Query: 314 YGKVMEVVIM 323
+G + +VV+M
Sbjct: 133 FGTIADVVVM 142
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+TF + V V+ H L+G+ ++ K
Sbjct: 127 KNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAV 186
Query: 278 PRTL 281
P+ +
Sbjct: 187 PKEI 190
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YF ++GEV +C+VM++ T R+RGFGF+TF DP +V V+ H LDG+ I
Sbjct: 41 TTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPASVDKVLAQELHELDGKKI 100
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
DPK P+ Q K KVF+GGL + T D++ +F +YGKV + ++M +T
Sbjct: 101 DPKVAFPKKAQ-SKMIIKTKKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKT 155
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YG+V D ++M + T R RGFGF+TF + + V + H ++G+ ++ K
Sbjct: 136 KNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQ 195
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 196 PKEVMLP 202
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGEV++ V+MK+ TGR+RGFGFV F+DP +VI+ H +DGR ++ K
Sbjct: 23 REYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKE-KHNIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSSFP-----------KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVM 138
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+ + E LR +F YG+V+E VIM RT
Sbjct: 7 KLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRT 42
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF ++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 123 TTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKII 181
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 182 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDK 231
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V I N P + G+ +
Sbjct: 207 TTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACI-NVPLEIHGKPV 265
Query: 272 DPKPCNP----RTLQKPKKNSSFPK 292
+ K P R ++ K S F K
Sbjct: 266 EVKRAQPRGNLREEEEAAKRSKFKK 290
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+A+ V V+ H LD +TIDPK
Sbjct: 39 KEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 99 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 147
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 128 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMTP 194
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+ D V V+ H LD +TIDPK
Sbjct: 39 KEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQNRHELDSKTIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 99 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKT 147
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 128 KHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMTP 194
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ +GRSRGFGF+TF DP V V+ H LDG+ I
Sbjct: 10 TTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 69 DPKRAIPRDEQERTS-----KIFVGGVSQEATEQEFKQFFMQFGRVVDATLM 115
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
S T +++Q +F ++G V+D +M + +TGR RGFGFVTF V + + P +
Sbjct: 91 SQEATEQEFKQ-FFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATL-SVPLEIH 148
Query: 268 GRTIDPKPCNPR 279
G+ I+ K PR
Sbjct: 149 GKAIEVKKAQPR 160
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGEV++ V+M++ TGR+RGFGF+ FADP VI H +DGR ++ K
Sbjct: 23 REYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME-KHMIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKN-----------SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q S K+F+GGL S VTE D R +F ++G + +VV+M
Sbjct: 82 PRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVM 138
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 123 RKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAV 182
Query: 278 PRTL 281
P+ L
Sbjct: 183 PKEL 186
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+F+GG+ + E LR +F++YG+V+E VIM R
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDR 41
>gi|336472157|gb|EGO60317.1| hypothetical protein NEUTE1DRAFT_56573, partial [Neurospora
tetrasperma FGSC 2508]
Length = 139
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM++ TGRSRGFGF+TF DP V +V+ H LDG+ I
Sbjct: 10 TTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQEKT-----SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 118
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTF 249
+ YF+++G V+D +M + +TGR RGFGFVTF
Sbjct: 100 REYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 25/153 (16%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +GEV++ V+MK+ TGR+RGFGFV FADP VI+ H++DGR ++ K PR
Sbjct: 25 YFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE-KHSIDGRMVEAKKAVPR 83
Query: 280 TLQKPKKNSS------------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
Q +S K+F+GGL S VTE D + +F+++G +++VV+M
Sbjct: 84 DDQNILNRNSGGSIHSSPGPGRTKKIFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHN 143
Query: 328 IRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+ G ++E AV +VL R+
Sbjct: 144 TQRPRGFGFITFDSEE--------AVDKVLMRT 168
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G +ID VVM ++ T R RGFGF+TF V V+ H L+G+ ++ K
Sbjct: 124 KNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRTFHELNGKMVEVKRAV 183
Query: 278 PRTLQ 282
P+ L
Sbjct: 184 PKELS 188
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 31 REYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 90
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 91 PRRAQ-PKMVTRTKKIFVGGLSVNTTVDDVKQYFEQFGKVDDAMLMFDKT 139
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 120 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 179
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 180 PKEVMSP 186
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F++YG V DCV+ K+ T RSRGFGFVTF DP V V+ PH LDG+ IDPKP
Sbjct: 25 KKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFEDPGCVNSVLNAGPHLLDGKQIDPKPAV 84
Query: 278 PRTLQKPK---KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
+ P+ N + KVF+GG+ N +E +++ +F+ +G+V V +M +T +
Sbjct: 85 QKGQPAPQASPSNVNTNKVFIGGVAQNTSEDEIKKYFSSFGQVKNVQLMYDKTTK 139
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS +G+V + +M + T R RGFGFVTF + V H ++G++++ K
Sbjct: 118 KKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVKKTCGVHFHNINGKSVEVKLAE 177
Query: 278 PRTLQK 283
R+ +
Sbjct: 178 DRSANR 183
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV+D +MK+N TG+SRGFGF+TF DP +V VI+ H LDG+ IDPK R
Sbjct: 179 YFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEVIK-TDHILDGKLIDPKRAIAR 237
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E + FF+++G +++ +M
Sbjct: 238 EEQ-----DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 276
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + ++GRSRGFGF+TF P+ V V N TL G+ ++ K PR
Sbjct: 263 FFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTVNKFLTLKGKAMEVKRAEPR 322
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+F +YGEV+D +MK+N TGRSRGFGF+TF DP +V VI+ H LDG+ IDPK
Sbjct: 222 EHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAVIKE-EHILDGKLIDPKRAIA 280
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R Q K+F+GG+ VTE + FF+++G +++ +M
Sbjct: 281 REDQ-----DRVGKIFVGGIDPMVTEREFNEFFSKFGSIIDCQLM 320
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+FS++G +IDC +M + +TGRSRGFGF+T+ P+ V V N TL G+ ++ K P
Sbjct: 306 EFFSKFGSIIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAMEVKRAAP 365
Query: 279 R 279
R
Sbjct: 366 R 366
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 16/130 (12%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS YG+V++ V+M++ TGR+RGFGF+ FADP VI + H +DG
Sbjct: 14 SWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD-KHIIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP---------------KVFLGGLPSNVTETDLRTFFNR 313
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +F++
Sbjct: 73 RTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQ 132
Query: 314 YGKVMEVVIM 323
+G + +VV+M
Sbjct: 133 FGTIADVVVM 142
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+TF + V V+ H L+G+ ++ K
Sbjct: 127 KNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAV 186
Query: 278 PRTL 281
P+ +
Sbjct: 187 PKEI 190
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 28/158 (17%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YG+V V+M++ TGR RGFGFV FADP+ + V+Q HT+DGRT++ K
Sbjct: 23 KEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE-KHTIDGRTVEAKRAL 81
Query: 278 PRTLQKPKK---------------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
R Q + N K+F+GGLPS +TE R +F YG V +VV+
Sbjct: 82 SREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVV 141
Query: 323 MSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
M + + G T++ AV +VL ++
Sbjct: 142 MYDQNTQRPRGFGFISFDTED--------AVDRVLHKT 171
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG V D VVM + T R RGFGF++F + V V+ H L+G+ ++ K
Sbjct: 127 RQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+P + TE L+ +FN+YG V + VIM +T
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKT 42
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +T + RGFGF+T+ADP+ V VI++ H ++G+ +
Sbjct: 57 TIAQFI-KHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKVIEDT-HIINGKQV 114
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K PR K + K+F+GG+PSNVTE + R FF RYG+V + IM +
Sbjct: 115 EIKRTIPRGAVGSKDFKT-KKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHS 169
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD--GRTIDPKPCN 277
+F+RYGEV D +M+++ T RSRGFGF+TF + V ++ + + +D G ++ K
Sbjct: 152 FFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLL-SMGNKIDFAGTQVEIKKAE 210
Query: 278 PR 279
P+
Sbjct: 211 PK 212
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 16/130 (12%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS YG+V++ V+M++ TGR+RGFGF+ FADP VI + H +DG
Sbjct: 14 SWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD-KHIIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP---------------KVFLGGLPSNVTETDLRTFFNR 313
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +F++
Sbjct: 73 RTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQ 132
Query: 314 YGKVMEVVIM 323
+G + +VV+M
Sbjct: 133 FGTIADVVVM 142
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+TF + V V+ H L+G+ ++ K
Sbjct: 127 KNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAV 186
Query: 278 PRTL 281
P+ +
Sbjct: 187 PKEI 190
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF ++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 119 TTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKII 177
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR Q+ K+F+GG+ T+ + R +F ++G+V++ +M
Sbjct: 178 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFRDYFAQFGRVVDATLM 224
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V I N P + G+ +
Sbjct: 203 TTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACI-NVPLEIHGKPV 261
Query: 272 DPKPCNP----RTLQKPKKNSSFPK 292
+ K P R ++ K S F K
Sbjct: 262 EVKRAQPRGNLREEEEAAKRSKFKK 286
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TYA + ++F +YGE+ D V+MK+ TG+ RGFGFVT+ADP+ V VI++ H ++G+ +
Sbjct: 31 TYAAFN-KHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDT-HVINGKQV 88
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + K + K+F+GGLPS VTE + + FF++YGKV E I+
Sbjct: 89 EIKRTIPKGSGQSKDFKT-KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQII 139
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +FS+YG+V + +++++ET RSRGFGF+ F V ++ + G ++ K
Sbjct: 124 KDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKA 183
Query: 277 NPRTLQKPKKNSSF 290
P+ P S+F
Sbjct: 184 EPKKASNPPHVSAF 197
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 131 TTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKII 189
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 190 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 239
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF + V I N P + G+ I
Sbjct: 215 TTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI-NVPLEIHGKPI 273
Query: 272 DPKPCNPR-TLQKPKKNSSFPKVFLGGLPSN 301
+ K PR L++ ++ S K G SN
Sbjct: 274 EVKKAQPRGNLREEEEASRRGKFRKDGDQSN 304
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+A+ V V+ H LD +TIDPK
Sbjct: 39 KEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 99 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKT 147
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 128 KHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMTP 194
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GE +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 86 REYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 145
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 146 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 194
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 169 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 228
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 229 ECKKAQPKEVMSP 241
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 16/192 (8%)
Query: 169 QNGPTTPAAGGPPAG--GATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGE 226
+NG GG AG GA + AGK ++ T + + YFS++GE
Sbjct: 11 ENGNEENLNGGEAAGENGAGEGLQIDASKCEEDAGKMFVGGLSWDTSKKDLKDYFSKFGE 70
Query: 227 VIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKK 286
V+DC + ++ TGRSRGFGF+ F + ++V V+Q H LDGR IDPK R + K
Sbjct: 71 VMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQKEHRLDGRQIDPK----RAM--AIK 124
Query: 287 NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPTQELPVQK 344
K+F+GGL TE +R +F +G++ + + P+T R G + K
Sbjct: 125 KEPVKKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITF------K 178
Query: 345 EATAVQQVLRRS 356
E AV+++L +
Sbjct: 179 EEFAVKKILEKK 190
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV+D +M++N TG+SRGFGF+TF DP +V VI+ H LDG+ IDPK R
Sbjct: 180 YFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKR-DHILDGKLIDPKRAIAR 238
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E + FF+++G +++ +M
Sbjct: 239 EEQ-----DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + +TGRSRGFGF+T+ P+ V V N TL G++++ K PR
Sbjct: 264 FFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAEPR 323
>gi|169613076|ref|XP_001799955.1| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
gi|160702644|gb|EAT82933.2| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
Length = 453
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ IDPK
Sbjct: 43 KDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVK-EHYLDGKIIDPKRAI 101
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q+ K+F+GG+ TE D FF +G+V++ +M
Sbjct: 102 PREEQERTS-----KIFVGGVSQEATEEDFTNFFKSFGRVVDATLM 142
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F +G V+D +M + ETGR RGFGFVTF V ++ P + G+ I+ K PR
Sbjct: 129 FFKSFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRQ-PLQILGKPIEVKRAQPR 187
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++ ++G+++D VVMK+ +T RSRGFGF+T++ + V +N PH +DGR ++PK
Sbjct: 41 KEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVDDAQKNRPHKIDGRIVEPKRAV 100
Query: 278 PR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR +++P +++ K+F+GG+ ++ E DLR +F+++G+++ V +++ +
Sbjct: 101 PREEIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKFGEIISVSLVTEK 150
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+I ++ +TG+ RGFGF+ F D + V + H + GR +D K
Sbjct: 132 REYFSKFGEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDRICLQPSHKVKGRRLDVKKAI 191
Query: 278 PRTL 281
+T+
Sbjct: 192 SKTV 195
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV +C VM++ TGRSRGFGF+TF D V V+ H LDG+ I
Sbjct: 10 TTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVK-EHYLDGKII 68
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ + TE D + FF ++G+V++ +M +
Sbjct: 69 DPKRAIPRDEQERT-----SKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDK 118
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F ++G V+D +M + +TGR RGFGFVTF V + P + G+ I+ K
Sbjct: 100 KKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ-PLEILGKPIEVKKAQ 158
Query: 278 PR 279
PR
Sbjct: 159 PR 160
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+S++GE+ D VVMK+ + +SRGFGFVTF + +V N PH LDG+ +D K PR
Sbjct: 32 YYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQANRPHKLDGKEVDSKRAMPR 91
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV-VIMSPRT 327
P+ +++ K+F+GGL +VT DL +F +YG V + ++M+ T
Sbjct: 92 EETSPEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTVTDAQIVMAKDT 140
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +YG V D ++ +T SRGF FVTF D ++V VI PHT++G D + R
Sbjct: 122 YFGQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKADVRKALSR 181
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ +++F ++GE+ +CVVM++ T RSRGFGF+TF DP V VV+ + LDG+ I
Sbjct: 11 TTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKI 70
Query: 272 DPKPCNPRTLQKPKKN-SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK P+ + P K ++ K+F+GGL +N +E D++ +F+++GK+ E ++M +
Sbjct: 71 DPKLAVPK--RAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDK 124
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS++G++ + ++M + T R RGFGFVTF N+ H ++ + ++ K
Sbjct: 106 KKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQ 165
Query: 278 PRTL 281
P+ +
Sbjct: 166 PKEV 169
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGE+ +CV+M + T RSRGFGFVTF D +NV V+Q+ PH LD + ID K
Sbjct: 21 REYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKVLQSGPHKLDDKNIDAKVAY 80
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P+ Q+ K + KVF+GG+ +N T D+ +F +G++ + ++M ++
Sbjct: 81 PKK-QRQKLVTRTKKVFVGGIATNTTTEDITKYFETFGQIEDAMLMFDKS 129
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YF +G++ D ++M + T R RGFGFV F ++ + H ++ + ++ K P
Sbjct: 111 KYFETFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKKAQP 170
Query: 279 RTL 281
+ +
Sbjct: 171 KEV 173
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 REYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F ++ KV + ++M +T
Sbjct: 97 PRRAQ-PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKT 145
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++ +V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 120 TTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 180 ECKKAQPKEVMSP 192
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGEV++ V+M++ TGR+RGFGFV FADP V+ + H +DGRT++ K
Sbjct: 23 KEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD-KHMIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q ++ K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDH 141
Query: 327 TIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+ G ++E AV++VL ++
Sbjct: 142 NTQRPRGFGFITYDSEE--------AVERVLHKT 167
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E L+ +F YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRT 42
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Query: 186 TGAAPT-GPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGF 244
+GAAP P G +GK + T + YFS++GE+ D +MK+N TGRSRGF
Sbjct: 177 SGAAPLPRPTEIGKESGKMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGF 236
Query: 245 GFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTE 304
GF+TF DP+ V VVI+ H LDG+ IDPK R Q K+F+GG+ V+E
Sbjct: 237 GFLTFKDPSAVDVVIKQ-DHILDGKLIDPKRAISREDQ-----DRVGKIFIGGIDPMVSE 290
Query: 305 TDLRTFFNRYGKVMEVVIM 323
+ FF+++G +++ +M
Sbjct: 291 GEFNEFFSKFGTIIDCQLM 309
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+FS++G +IDC +M + +TGRSRGFGF+TF P+ V V N TL G+ ++ K P
Sbjct: 295 EFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKYLTLKGKAMEVKRAAP 354
Query: 279 R 279
R
Sbjct: 355 R 355
>gi|159164101|pdb|2DH8|A Chain A, Solution Structure Of The N-Terminal Rna Binding Domain In
Daz-Associated Protein 1
Length = 105
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN VG V+ + PHTLDGR
Sbjct: 26 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 85
Query: 270 TIDPKPCNPRTLQ 282
IDPKPC PR +Q
Sbjct: 86 NIDPKPCTPRGMQ 98
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR++F++YG+V++ VIM +T
Sbjct: 18 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKT 53
>gi|402899734|ref|XP_003912843.1| PREDICTED: uncharacterized protein LOC101004762 [Papio anubis]
Length = 362
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
Q PK + K+F+GGL +N D++ +F ++GK+
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKL 136
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 13/118 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV F+DP+ VI+ H++DGR ++ K
Sbjct: 23 KDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE-KHSIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSS------------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q +S K+F+GGL S VTE+D R +F+++G + +VV+M
Sbjct: 82 PRDDQNMLSRNSGGSIHGSPGPGRTKKIFVGGLASTVTESDFRKYFDQFGLITDVVVM 139
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 124 RKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAV 183
Query: 278 PRTL 281
P+ L
Sbjct: 184 PKEL 187
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV +C VM+++ TGRSRGFGF+TF DP V +V+ H LDG+ IDPK PR
Sbjct: 18 YFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK-EHYLDGKIIDPKRAIPR 76
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+ K+F+GG+ TE D FF ++G+V++ +M +
Sbjct: 77 EEQERT-----SKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDK 118
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G V+D +M + ETGR RGFGFVTF V ++ P + G+ I+ K PR
Sbjct: 102 FFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRG-PLQILGKQIEVKRAQPR 160
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 182 AGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRS 241
+G A G G S GK A+ T + ++F +YG + D V+MK+ T
Sbjct: 95 SGYAVAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMP 154
Query: 242 RGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSN 301
RGFGFVTF+DP+ + V+++ H +DGRT++ K PR K K+F+GGLP +
Sbjct: 155 RGFGFVTFSDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPS 213
Query: 302 VTETDLRTFFNRYGKVMEVVIM 323
+TE +L+ F+ YG V+E IM
Sbjct: 214 LTEDELKDHFSSYGNVVEHQIM 235
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG V++ +M ++ TGRSRGFGF+TF ++V VI + L G+ ++ K P
Sbjct: 222 HFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 281
Query: 279 R 279
+
Sbjct: 282 K 282
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 17/131 (12%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YFS YG+V++ V+M++ TGR+RGFGF+ FADP VI H +DG
Sbjct: 14 SWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIME-KHIIDG 72
Query: 269 RTIDPKPCNPRTLQKPKKNSSFP----------------KVFLGGLPSNVTETDLRTFFN 312
RT++ K PR Q+ K + P K+F+GGLPS++TE + + +F+
Sbjct: 73 RTVEAKKAVPRDDQQVLKRHASPIQLMSPVHGGGGGRTKKIFVGGLPSSITEEEFKNYFD 132
Query: 313 RYGKVMEVVIM 323
++G + +VV+M
Sbjct: 133 QFGTIADVVVM 143
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+TF + V V+ H L+G+ ++ K
Sbjct: 128 KNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAV 187
Query: 278 PRTLQKPKKNSS 289
P+ N S
Sbjct: 188 PKETSPVSNNRS 199
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS YGE+ D V+M + TGR RGFGF+TFADP V++ H +DGR ++ K PR
Sbjct: 70 YFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE-DHVIDGRAVEVKKTVPR 128
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + S K+F+GG+PS++TE +L+ +F+ YG ++E IM
Sbjct: 129 EGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIM 172
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ YFS YG +++ +M ++ TGRSRGFGFVTF + V + + H L G+ ++ K
Sbjct: 157 KDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKA 216
Query: 277 NPR 279
P+
Sbjct: 217 EPK 219
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF RYG VID VVM+++ T RSRGFGFVTFADP +V V+ + PH + R IDPK PR
Sbjct: 19 YFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSSGPHVVCDREIDPKRAIPR 78
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+ P +++ K+FLGGL S++ E ++ +F ++G++ + + R
Sbjct: 79 SSSDP-ASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALCQRDR 124
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
YF ++GE+ D + ++ +TGR RGFGF+TF V++ HT+DG +
Sbjct: 108 YFVQFGEIEDALCQRDRDTGRPRGFGFITFKTEEAAESVLRQQYHTIDGNRV 159
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +FS+YG +++ VVM++ +TGR RGFGFVTF +P V+++ H +DG
Sbjct: 17 SWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVEDV-HVIDG 75
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R ID K P+ + KPK KVF+GGL + TE R +F+++G+V+E IM
Sbjct: 76 RQIDAKKSVPQEM-KPKAR----KVFVGGLSPDTTEDQFREYFSQFGEVVEAQIM 125
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA-DPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YFS++GEV++ +M+++ +GRSRGFGFVTFA D + V H L G+ ++ KP
Sbjct: 110 REYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAAGTMHDLGGKKVEVKPA 169
Query: 277 NPR 279
P+
Sbjct: 170 TPK 172
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+FLGGL + TE LR F++YG ++E V+M R
Sbjct: 10 KLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDR 44
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TYA + ++F +YGE+ D V+MK+ TG+ RGFGFVT+ADP+ V VI++ H ++G+ +
Sbjct: 31 TYAAFN-KHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDT-HVINGKQV 88
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + K + K+F+GGLPS VTE + + FF++YGKV E I+
Sbjct: 89 EIKRTIPKGSGQSKDFKT-KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQII 139
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS+YG+V + +++++ET RSRGFGF+ F V ++ + + G ++ K
Sbjct: 124 KDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKA 183
Query: 277 NPRTLQKPKKNSSF 290
P+ P S+F
Sbjct: 184 EPKKASNPPHVSAF 197
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++G++ + +VMK+ T RSRGFGFVTF+DP +V V+ N PH LDG+ IDPK
Sbjct: 68 REYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPASVDKVLANGPHELDGKKIDPKIAF 127
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ PK + KVF+GGL + T D++ +F ++G++ + ++M
Sbjct: 128 PKRAH-PKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLM 172
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF ++G + D ++M + +T R RGFGFVTF + + V V + H ++ + +
Sbjct: 151 TTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMV 210
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 211 ECKKAQPKEVMMP 223
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FADPN V+ H +DG+ ++ K
Sbjct: 23 RDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVL-LKHIIDGKIVEAKKAV 81
Query: 278 PRT--LQKPKKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR + K NSS K+F+GGL S+VTE + + +F ++G + +VV+M
Sbjct: 82 PRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDH 141
Query: 326 RTIR---AGITRVPTQELPVQKEATAVQQVLRRS 356
RT R G ++E AV +VL+++
Sbjct: 142 RTQRPRGFGFISYDSEE--------AVDKVLQKT 167
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ +YF+++G + D VVM ++ T R RGFGF+++ V V+Q H L+G+ +
Sbjct: 118 TEAEFK-KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMV 176
Query: 272 DPKPCNPRTL 281
+ K P+ +
Sbjct: 177 EVKLAVPKDM 186
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 16/121 (13%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YG+V+ VVM++ TGR RGFGFV FADPN + V+Q+ HT+DGRT++ K
Sbjct: 23 KDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRVLQD-KHTIDGRTVEAKKAL 81
Query: 278 PRTLQK---------PKKNS------SFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
R Q+ P +NS K+F+GGLP +T+ + R +F YG V +VVI
Sbjct: 82 SREEQQTNARSGNLNPPRNSGSGGNIRTKKIFVGGLPPALTDDEFRQYFEAYGLVTDVVI 141
Query: 323 M 323
M
Sbjct: 142 M 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG V D V+M + T R RGFGF++F + + V V+ H L+G+ ++ K
Sbjct: 127 RQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGKQVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGEV++ V+M++ TGR+RGFGFV FADP V+ + H +DGRT++ K
Sbjct: 23 KEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD-KHMIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q ++ K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDH 141
Query: 327 TIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+ G ++E AV++VL ++
Sbjct: 142 NTQRPRGFGFITYDSEE--------AVERVLHKT 167
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E L+ +F YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRT 42
>gi|119614913|gb|EAW94507.1| musashi homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 148
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
Q PK + K+F+GGL +N D++ +F ++GK
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGK 135
>gi|156361834|ref|XP_001625489.1| predicted protein [Nematostella vectensis]
gi|156212325|gb|EDO33389.1| predicted protein [Nematostella vectensis]
Length = 164
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 5/110 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q YF +YGEV DCV+M + T RSR FGF+TF DP+ V V+ + PH LDG+ IDPKP
Sbjct: 18 QGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVMDDKPHQLDGKMIDPKPAV 77
Query: 278 PRT-LQKP---KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q P +N+ F K+F+GGL + ++ DL +F YGKV+ V +M
Sbjct: 78 PRGPGQGPPQGNQNNEF-KIFVGGLAHSTSKQDLEDYFTAYGKVVSVNLM 126
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 188 AAPTGPNPSGPSAGKPPADYS------AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRS 241
A P GP GP G ++ A+ T Q + YF+ YG+V+ +M + +T +
Sbjct: 76 AVPRGPG-QGPPQGNQNNEFKIFVGGLAHSTSKQDLEDYFTAYGKVVSVNLMVDPQTQKM 134
Query: 242 RGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
RGFGFVTF ++V H ++G+T+
Sbjct: 135 RGFGFVTFESKDSVTKAADEHYHQINGKTV 164
>gi|289742401|gb|ADD19948.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 469
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +++++G+V+D VVM++N T RSRGFGF+T+ V +N PH +DG+T++ K
Sbjct: 54 KEFYNQWGKVVDVVVMRDNMTKRSRGFGFITYTKSYMVDKAQENRPHVIDGKTVEAKRAL 113
Query: 278 PRTLQKPKKNSSF--PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGIT 333
PR ++ +N +F K+F+GGL N E+ L +F+ +GKV+ + I++ +T R G
Sbjct: 114 PRPEREASENKNFSVKKLFVGGLKDNHDESCLTEYFSEFGKVVSIKILTDKTTGKRRGFA 173
Query: 334 RVPTQELPVQKEATAVQQVLRRSSTTK 360
V + +A +LR++ + K
Sbjct: 174 FVEFDDYDAVDKA-----ILRKTHSIK 195
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
YFS +G+V+ ++ + TG+ RGF FV F D + V I H++ +D K
Sbjct: 147 EYFSEFGKVVSIKILTDKTTGKRRGFAFVEFDDYDAVDKAILRKTHSIKYVVVDVK 202
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL S TE L+ F+N++GKV++VV+M
Sbjct: 34 EHLRKLFIGGLASYTTEESLKEFYNQWGKVVDVVVM 69
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 182 AGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRS 241
+G A G G S GK A+ T + ++F +YG + D V+MK+ T
Sbjct: 36 SGYAVAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMP 95
Query: 242 RGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSN 301
RGFGFVTF+DP+ + V+++ H +DGRT++ K PR K K+F+GGLP +
Sbjct: 96 RGFGFVTFSDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPS 154
Query: 302 VTETDLRTFFNRYGKVMEVVIM 323
+TE +L+ F+ YG V+E IM
Sbjct: 155 LTEDELKDHFSSYGNVVEHQIM 176
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG V++ +M ++ TGRSRGFGF+TF ++V VI + L G+ ++ K P
Sbjct: 163 HFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Query: 279 R 279
+
Sbjct: 223 K 223
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FADPN V+ H +DG+ ++ K
Sbjct: 23 RDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVL-LKHIIDGKIVEAKKAV 81
Query: 278 PRT--LQKPKKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR + K NSS K+F+GGL S+VTE + + +F ++G + +VV+M
Sbjct: 82 PRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDH 141
Query: 326 RTIR---AGITRVPTQELPVQKEATAVQQVLRRS 356
RT R G ++E AV +VL+++
Sbjct: 142 RTQRPRGFGFISYDSEE--------AVDKVLQKT 167
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ +YF+++G + D VVM ++ T R RGFGF+++ V V+Q H L+G+ +
Sbjct: 118 TEAEFK-KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMV 176
Query: 272 DPKPCNPRTL 281
+ K P+ +
Sbjct: 177 EVKLAVPKDM 186
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 98/201 (48%), Gaps = 21/201 (10%)
Query: 168 PQNGPTTPA--AGG---PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRY 220
P +GP TPA GG P+G GA N S AGK ++ T + + Y
Sbjct: 34 PGSGPATPAGSVGGTTAAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 93
Query: 221 FSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRT 280
F+++GEV+DC + + TGRSRGFGF+ F D ++V V+ H LDGR IDPK
Sbjct: 94 FTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM- 152
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQ 338
K K+F+GGL TE +R +F ++G++ +E+ I R G +
Sbjct: 153 -----KKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF- 206
Query: 339 ELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 207 -----KEEDPVKKVLEKKFHT 222
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 24/135 (17%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q +FS +GEV VM++ TGR RGFGFV +ADP +V +Q PHTLDGRT+D K
Sbjct: 23 QEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAALQE-PHTLDGRTVDVKRAL 81
Query: 278 PRTLQKPKK-----------------------NSSFPKVFLGGLPSNVTETDLRTFFNRY 314
R Q+ K + K+F+GGLPS++T+ + R +F +
Sbjct: 82 SREEQQATKAVNPSAGRNAGGGGGGGGGGDAGGARTKKIFVGGLPSSLTDEEFRQYFQTF 141
Query: 315 GKVMEVVIMSPRTIR 329
G V +VV+M +T +
Sbjct: 142 GAVTDVVVMYDQTTQ 156
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D VVM + T R RGFGF+TF + V V+ H L G+ ++ K
Sbjct: 135 RQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRAL 194
Query: 278 PR 279
PR
Sbjct: 195 PR 196
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
R+F +YGE++D V+MK+ T + RGFGF+T++DP V VI++ H ++G+ ++ K P
Sbjct: 43 RHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIEDN-HVINGKQVEIKRTIP 101
Query: 279 R-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ ++Q K+ K+F+GGLPS +TE + ++FF RYG V++ IM
Sbjct: 102 KGSVQSSSKDFKTKKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIM 147
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +F+RYG V+D +M ++ET RSRGFGF+ FA V ++ N L G ++ K
Sbjct: 132 KSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAGSKVEIKKA 191
Query: 277 NPR 279
P+
Sbjct: 192 EPK 194
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGE++D +MK+ TGRSRGFGF+TF DP V VI+ H LDG+ IDPK R
Sbjct: 182 YFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIKK-DHILDGKLIDPKRAIAR 240
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E D FF+++G +++ +M
Sbjct: 241 EEQ-----DKVGKIFVGGIDPLVNERDFNDFFSQFGHIIDAQLM 279
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + +TGRSRGFGF+T+ P V V N TL G+ ++ K PR
Sbjct: 266 FFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVNKYLTLKGKAMEVKRAEPR 325
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FAD V + H +DGR ++ K
Sbjct: 24 REYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA-AVAERVTTEKHMIDGRMVEAKKAV 82
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR K N+S K+F+GGLPSNVTE D R +F ++G + +VV+M
Sbjct: 83 PRDDHSIVTKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFRRYFEQFGVITDVVVM 139
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 124 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAV 183
Query: 278 PR 279
P+
Sbjct: 184 PK 185
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TYA + ++F +YGE+ D V+MK+ TG+ RGFGFVT+ADP+ V VI++ H ++G+ +
Sbjct: 16 TYAAFN-KHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDT-HVINGKQV 73
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + K + K+F+GGLPS VTE + + FF++YGKV E I+
Sbjct: 74 EIKRTIPKGSGQSKDFKT-KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQII 124
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG+V + +++++ET RSRGFGF+ F V ++ +G ID
Sbjct: 109 KDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILS------EGNMIDMAGTQ 162
Query: 278 PRTLQ 282
LQ
Sbjct: 163 VSILQ 167
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
PN P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TFA+P
Sbjct: 32 PNGGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEP 91
Query: 253 NNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+V V++ CP HTLDG+ IDPK P+ + K+ + K+F+GG+ + + +++ +F
Sbjct: 92 GSVDKVLK-CPIHTLDGKKIDPKHATPK--NRAKQANRTKKIFVGGVSQDTSSEEVKAYF 148
Query: 312 NRYGKVME-VVIMSPRTIR 329
N++GKV E V++M +T R
Sbjct: 149 NQFGKVEETVMLMDQQTKR 167
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ + YF+++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 139 TSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 198
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ + + +V LG L
Sbjct: 199 ECKKAQPKEAVQQGALALGKRVVLGAL 225
>gi|348668207|gb|EGZ08031.1| hypothetical protein PHYSODRAFT_526739 [Phytophthora sojae]
Length = 158
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+++F +YG + D +MK+ TG+ RGFGFVTFAD + V+ HTLDGR+++ K
Sbjct: 35 RQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDET-HTLDGRSVEVKRAI 93
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR P S K+F+GGL VTE D R +F +GK+ + V+M R
Sbjct: 94 PREKTAPGGGSRLKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDR 142
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
+ YF +G++ D VVM + +T RSRGFGF+TF +
Sbjct: 124 RHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEE 158
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
PN P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TFA+P
Sbjct: 53 PNGGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEP 112
Query: 253 NNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+V V++ CP HTLDG+ IDPK P+ + K+ + K+F+GG+ + + +++ +F
Sbjct: 113 GSVDKVLK-CPIHTLDGKKIDPKHATPKN--RAKQANRTKKIFVGGVSQDTSSDEVKAYF 169
Query: 312 NRYGKVME-VVIMSPRTIR 329
N++GKV E V++M +T R
Sbjct: 170 NQFGKVEETVMLMDQQTKR 188
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + ++ K P+
Sbjct: 168 YFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 227
Query: 280 TLQKPKKNSSFPKVFLGGL 298
+P + +V LG L
Sbjct: 228 EAVQPGALTLGKRVVLGAL 246
>gi|449463368|ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
Length = 347
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TY Q+ ++F YGE+ D V+MK+ TG+ RGFGF+T+ADP+ V VI++ H ++G+ +
Sbjct: 31 TYTQFN-KHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDT-HVINGKQV 88
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ Q K+ K+F+GG+PS VTE + + FF++YGK++E I+
Sbjct: 89 EIKRTIPKG-QGQSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEHQII 139
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 24/28 (85%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFG 245
+ +FS+YG++++ +++++ET RSRGFG
Sbjct: 124 KHFFSKYGKIVEHQIIRDHETNRSRGFG 151
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ ++M++ TGR+RGFGFV FADP V+ H +DGRT++ K
Sbjct: 21 REYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLE-KHVIDGRTVEAKKAV 79
Query: 278 PRTLQK--PKKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q + N+ K+F+GGL S VTE+D + +F+++G +++VV+M
Sbjct: 80 PRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVM 136
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G ++D VVM ++ T R RGFGF+T+ +V V+ H L+G+ ++ K
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
Query: 278 PR 279
P+
Sbjct: 181 PK 182
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FAD VI H +DGR ++ K
Sbjct: 23 KEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME-KHNIDGRMVEAKKAV 81
Query: 278 PRTLQKPKKNSS------------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q S+ K+F+GGL S VTETD R +F +YG + +VV+M
Sbjct: 82 PRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTETDFRKYFEQYGTITDVVVM 139
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +YG + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 124 RKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAV 183
Query: 278 PRTLQ 282
P+ L
Sbjct: 184 PKELS 188
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 182 AGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRS 241
+G A G G S GK A+ T + ++F +YG + D V+MK+ T
Sbjct: 36 SGYADAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMP 95
Query: 242 RGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSN 301
RGFGFVTF+DP+ + V+++ H +DGRT++ K PR K K+F+GGLP +
Sbjct: 96 RGFGFVTFSDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPS 154
Query: 302 VTETDLRTFFNRYGKVMEVVIM 323
+TE +L+ F+ YG V+E IM
Sbjct: 155 LTEDELKDHFSSYGNVVEHQIM 176
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 163 HFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Query: 279 R 279
+
Sbjct: 223 K 223
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE++D VVMK+ T RSRGFGF+T+ +P V N PH +DG+T++ K PR
Sbjct: 36 FYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPR 95
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
P+ + + K+F+GGL +VT +LR +F++YG + E +++
Sbjct: 96 EDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVA 141
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YFS+YG + +C V+ E+G SRGFGFVTF D + V I PH + D K
Sbjct: 125 REYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP-RTIRA 330
++ F K+F+GGL TE L+ F++++G++++VV+M RT R+
Sbjct: 11 RRTEQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRS 57
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N + P+ GK ++ T ++ YF +G V D ++MK+ T RSRGFGF+TF +PN
Sbjct: 104 NGNDPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPN 163
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNR 313
+V V+Q HTLDG+ IDPK P+ K + N + K+F+GG+ + + +++ +F++
Sbjct: 164 SVDKVLQVPIHTLDGKKIDPKHATPKNRPKTQSNKT-KKIFVGGVSQDTSAEEVKAYFSQ 222
Query: 314 YGKVME-VVIMSPRTIR 329
+GKV E V++M +T R
Sbjct: 223 FGKVEETVMLMDQQTKR 239
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 211 TSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 270
Query: 272 DPKPCNPRTLQKPKKNSSFPK-VFLGGL 298
+ K P+ P K + LG L
Sbjct: 271 ECKKAQPKEAVAPTAQQLLQKRIILGNL 298
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FAD V + H +DGR ++ K
Sbjct: 25 REYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA-TVAERVTIEKHMIDGRMVEAKKAV 83
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR K N+S K+F+GGLPSNVTE D R +F ++G + +VV+M
Sbjct: 84 PRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVM 140
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K P+
Sbjct: 127 YFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPK 186
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGE+ D V+M + TGR RGFGFVTF DP +V++ H +DGR ++ K PR
Sbjct: 440 YFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLK-IDHIIDGRAVEVKRTVPR 498
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K S K+F+GG+P +TE + + +F+ +G+++E IM
Sbjct: 499 ADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIEHQIM 542
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQ-NCPHTLDGRTIDPKPCNP 278
YFS +G +I+ +M + +T RSRGFGF+TF + ++V + + H L G+ ++ K P
Sbjct: 529 YFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVP 588
Query: 279 RTLQKP------KKNSSFPKVFLGGLPSNVTETDL 307
+ + +S + GGL ++ TD
Sbjct: 589 KKVAYDFNSNSGHTSSGYDMYRCGGLYDDIIGTDF 623
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+ I
Sbjct: 58 TTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKII 116
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 117 DPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDK 166
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V ++ + G+ I
Sbjct: 142 TTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVDACLKTHLE-IHGKPI 200
Query: 272 DPKPCNPR 279
+ K PR
Sbjct: 201 EVKKAQPR 208
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F +YG + D V+MK+ T RGFGFVTF+DP+ + V+Q+ HT+DGRT++ K P
Sbjct: 109 KHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD-EHTIDGRTVEVKRTVP 167
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R K K+F+GG+P ++TE L+ F+ YGKV+E IM
Sbjct: 168 REEMSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIM 212
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + + V V+ + H L G+ ++ K
Sbjct: 197 KEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKA 256
Query: 277 NPR 279
P+
Sbjct: 257 EPK 259
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV + +VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKPKKNS 288
P+ + P +S
Sbjct: 186 PKEVMSPTGSS 196
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV + +VM++ T RSRGFGFVTF D V V+ H LD +TIDPK
Sbjct: 37 KDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAF 96
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 97 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 145
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 126 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 185
Query: 278 PRTLQKPKKNS 288
P+ + P +S
Sbjct: 186 PKEVMSPTGSS 196
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++GE+ID VVMK+ + +SRGFGFVT+ D ++V N PHT+DG+ +D K PR
Sbjct: 33 YYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPR 92
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ +++ K+F+G L +VT DL +F+++G V + I+
Sbjct: 93 EETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIV 136
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G V D ++ ET SRGF FVTF D + V VI PHT+ D + R
Sbjct: 123 YFSQFGTVTDAQIVIAKETNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSR 182
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PPAG GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 63 PPAGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 122
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 123 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 176
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQELPVQK 344
L TE +R +F +G++ + + M P++ R G + +E PV+K
Sbjct: 177 LNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 226
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 187 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 246
Query: 278 PRTL 281
P+ +
Sbjct: 247 PKEV 250
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 13/127 (10%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + YF +G+V++ V+MK+ TGR+RGFGF+ FADP+ VI+ H +DG
Sbjct: 14 SWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE-KHNIDG 72
Query: 269 RTIDPKPCNPRTLQK-PKKNS-----------SFPKVFLGGLPSNVTETDLRTFFNRYGK 316
R ++ K PR Q P +NS K+F+GGL S VTE+D + +F+++G
Sbjct: 73 RMVEAKRAIPRDDQNIPSRNSVSSMHGSPGPDHTRKIFVGGLASTVTESDFKNYFDQFGI 132
Query: 317 VMEVVIM 323
+++ V+M
Sbjct: 133 IIDAVVM 139
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G +ID VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 124 KNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNGKMVEVKRAV 183
Query: 278 PRTLQ 282
P+ L
Sbjct: 184 PKELS 188
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H++ +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE++D VVMK++ + RSRGFGF+T+ +P V N PH +DG+T++ K PR
Sbjct: 36 FYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPR 95
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
Q P+ + + K+F+G L +VT+ +LR +F++YG +++ I++
Sbjct: 96 EDSQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGNIVDCEIVT 141
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG ++DC ++ ETG SRGFGFVTF D + V I PH + D K +
Sbjct: 127 YFSKYGNIVDCEIVTWKETGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVK----K 182
Query: 280 TLQKPKKNSSFPKVF 294
L K + N + K F
Sbjct: 183 ALSKEQINETRRKRF 197
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
++ F K+F+GGL TET L+ F++++G++++VV+M
Sbjct: 11 RRTEQFRKLFIGGLTPQTTETMLKDFYSQWGEIVDVVVM 49
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG V+D +M+++ TGRSRGFGF+TF DP +V VI+ H LDG+ IDPK R
Sbjct: 191 YFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVIK-VDHILDGKLIDPKRAIAR 249
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q K+F+GG+ VTE + FF +YG +++ +M +
Sbjct: 250 EEQ-----DRVGKIFVGGIDPLVTEKEFYDFFAQYGSIIDAQLMVDK 291
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F++YG +ID +M + +TGRSRGFGF+T+ P+ V V N +L GR ++ K PR
Sbjct: 275 FFAQYGSIIDAQLMVDKDTGRSRGFGFITYDSPDAVDRVTVNKYLSLKGRAMEVKRAEPR 334
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGF+T+ADP+ V VI++ PH ++G+ +
Sbjct: 1988 TIAQFI-KHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED-PHIINGKQV 2045
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K PR K + K+F+GG+PSNVTE + R FF RYG+V + IM
Sbjct: 2046 EIKRTIPRGAVGSKDFRT-KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIM 2096
Score = 45.8 bits (107), Expect = 0.040, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTF 249
+F+RYGEV D +M+++ T RSRGFGF+TF
Sbjct: 2083 FFTRYGEVKDHQIMRDHSTNRSRGFGFITF 2112
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++GE+ID VVMK+ + +SRGFGFVT+ D ++V N PHT+DG+ +D K PR
Sbjct: 33 YYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPR 92
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ +++ K+F+G L +VT DL +F+++G V + I+
Sbjct: 93 EETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIV 136
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G V D ++ +T SRGF FVTF D + V VI PHT+ D + R
Sbjct: 123 YFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSR 182
>gi|154281459|ref|XP_001541542.1| hypothetical protein HCAG_03640 [Ajellomyces capsulatus NAm1]
gi|150411721|gb|EDN07109.1| hypothetical protein HCAG_03640 [Ajellomyces capsulatus NAm1]
Length = 157
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYA---------QYQQRYFSRYGEVIDCVVMKNNETGRS 241
T NP+ + D S + + Q + YFS++GEV +C VM++ +GRS
Sbjct: 5 TTINPTLATKRLHERDLSDHKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGASGRS 64
Query: 242 RGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSN 301
RGFGF+TF DP V V+ H LDG+ IDPK PR Q+ K+F+GG+
Sbjct: 65 RGFGFLTFKDPKTVNTVMVK-EHYLDGKIIDPKRAIPRDEQERT-----SKIFVGGVSQE 118
Query: 302 VTETDLRTFFNRYGKVMEVVIM 323
TE D + FF ++G+V++ +M
Sbjct: 119 ATEQDFKQFFMQFGRVVDATLM 140
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
PN P+ GK ++ T ++ + YF+ +G V D ++MK+ T RSRGFGF+TFA+P
Sbjct: 32 PNGGDPAPGKLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEP 91
Query: 253 NNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+V V++ CP HTLDG+ IDPK P+ + K+ + K+F+GG+ + + +++ +F
Sbjct: 92 GSVDKVLK-CPIHTLDGKKIDPKHATPK--NRAKQANRTKKIFVGGVSQDTSSDEVKAYF 148
Query: 312 NRYGKVME-VVIMSPRTIR 329
N++GKV E V++M +T R
Sbjct: 149 NQFGKVEETVMLMDQQTKR 167
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + ++ K P+
Sbjct: 147 YFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 206
Query: 280 TLQKP 284
+P
Sbjct: 207 EAVQP 211
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FAD V + H +DGR ++ K
Sbjct: 25 REYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA-TVAERVTIEKHMIDGRMVEAKKAV 83
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR K N+S K+F+GGLPSNVTE D R +F ++G + +VV+M
Sbjct: 84 PRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVM 140
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K P+
Sbjct: 127 YFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPK 186
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q +F +YGE+ID V+MK+ TG RGFGFVTFADP+ V+ + H +DGRT++ K
Sbjct: 18 QSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVVLD-KHVIDGRTVEAKKSV 76
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR K K+F+GG+P ++T+ + +++F +G VME IM +
Sbjct: 77 PRENLATSKGPKTKKIFVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHS 126
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV-GVVIQNCPHTLDGRTIDP--- 273
+ YF+ +G V++ +M+++ TGRSRGFGFVTF V ++ H L G+ ++
Sbjct: 107 KSYFAGFGSVMEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKLHELAGKQVNDWEF 166
Query: 274 ---KPCN 277
+PC+
Sbjct: 167 YWSQPCH 173
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 68/125 (54%), Gaps = 21/125 (16%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+FS YGEV VM++ TGR RGFGFV FADP V +Q+ PHTLDGRT+D K
Sbjct: 24 EHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRALQD-PHTLDGRTVDVKRALS 82
Query: 279 RTLQKPKKNSS--------------------FPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
R Q+ K ++ K+F+GGLPS +TE R +F +G V
Sbjct: 83 REEQQASKAANPSGGRNTGGGNGGGDANGARTKKIFVGGLPSTLTEDGFRQYFQTFGIVT 142
Query: 319 EVVIM 323
+VV+M
Sbjct: 143 DVVVM 147
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D VVM + T R RGFGF+TF + V V+Q H L G+ ++ K
Sbjct: 132 RQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQKTFHDLGGKLVEVKRAL 191
Query: 278 PR 279
PR
Sbjct: 192 PR 193
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FADPN V+ H +DG+ ++ K
Sbjct: 23 RDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVL-LKHIIDGKIVEAKKAV 81
Query: 278 PRT--LQKPKKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR + K NSS K+F+GGL S+VTE + + +F ++G + +VV+M
Sbjct: 82 PRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDH 141
Query: 326 RTIR---AGITRVPTQELPVQKEATAVQQVLRRS 356
RT R G ++E AV +VL+++
Sbjct: 142 RTQRPRGFGFISYDSEE--------AVDKVLQKT 167
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ +YF+++G + D VVM ++ T R RGFGF+++ V V+Q H L+G+ +
Sbjct: 118 TEAEFK-KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMV 176
Query: 272 DPKPCNPRTL 281
+ K P+ +
Sbjct: 177 EVKLAVPKDM 186
>gi|296085054|emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 189 APTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVT 248
AP + G S GK A T +YF +YGE+ D VVMK+ +TGR RGFGF+T
Sbjct: 6 APKTHSDDGASPGKIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFIT 65
Query: 249 FADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLR 308
+ADP+ V VIQ H ++G+ ++ K PR + + K+F+GG+ ++V+E + +
Sbjct: 66 YADPSVVDEVIQET-HIINGKQVEIKRTIPRGSSQSNDFKT-RKIFVGGILTSVSEDEFK 123
Query: 309 TFFNRYGKVMEVVIMSPRTIR 329
FF++YGKV+E I+ +
Sbjct: 124 NFFSKYGKVVEHEIIHDHVTK 144
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG+V++ ++ ++ T RSRGFGF+ F + V ++ N G ID +
Sbjct: 123 KNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTN------GNMIDMEGTQ 176
Query: 278 PRTLQ-KPKKNSSFP 291
+ +PKK+SS P
Sbjct: 177 VEIKKAEPKKSSSNP 191
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE++D VVMK+ T RSRGFGF+T+ +P V N PH +DG+T++ K PR
Sbjct: 36 FYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPR 95
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
P+ + + K+F+GGL +VT +LR +F++YG + E +++
Sbjct: 96 EDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVA 141
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YFS+YG + +C V+ E+G SRGFGFVTF D + V I PH + D K
Sbjct: 125 REYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP-RTIRA 330
++ F K+F+GGL TE L+ F++++G++++VV+M RT R+
Sbjct: 11 RRTEQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRS 57
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F +YG + D V+MK+ T RGFGFVTF+DP+ + V+Q+ HT+DGRT++ K P
Sbjct: 46 KHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD-EHTIDGRTVEVKRTVP 104
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
R K K+F+GG+P ++TE L+ F+ YGKV+E IM
Sbjct: 105 REEMSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIM 149
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + + V V+ + H L G+ ++ K
Sbjct: 134 KEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKA 193
Query: 277 NPR 279
P+
Sbjct: 194 EPK 196
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE++D VVMK+ T RSRGFGF+T+ +P V N PH +DG+T++ K PR
Sbjct: 36 FYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPR 95
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
P+ + + K+F+GGL +VT +LR +F++YG + E +++
Sbjct: 96 EDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVA 141
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YFS+YG + +C V+ E+G SRGFGFVTF D + V I PH + D K
Sbjct: 125 REYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 284 PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP-RTIRA 330
++ F K+F+GGL TE L+ F++++G++++VV+M RT R+
Sbjct: 10 DRRTEQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRS 57
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++GEV +C+VM++ T RSRGFGFVT+AD V V+ H LD +TIDPK
Sbjct: 16 REYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQNRHELDSKTIDPKVAF 75
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL N T D++ +F+++GKV + ++M +T
Sbjct: 76 PRRAQ-PKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKT 124
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + ++ K
Sbjct: 105 KQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 164
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 165 PKEVMTP 171
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H++ +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + + +F ++GEV+DCVVM++ T +SRGFGF+TF + V PH +DGR
Sbjct: 23 YKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQAARPHKVDGR 82
Query: 270 TIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR +P+ ++ KVF+GGL +V E+DLR +F+++G ++ V +++ +
Sbjct: 83 EVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEK 140
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG-RTIDPKPCNP 278
YFS++G ++ ++ +TGR RGF FV + D + V ++ H L G RT K +
Sbjct: 124 YFSQFGNILSVNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHMLKGKRTEVKKALSK 183
Query: 279 RTLQKPKKNS 288
+ ++ KK+
Sbjct: 184 QEMENLKKDK 193
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGE+ D V+M + TGR RGFGFVTF DP +V++ H +DGR ++ K PR
Sbjct: 442 YFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLK-IDHIIDGRAVEVKRTVPR 500
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K S K+F+GG+P +TE + + +F+ +G+++E IM
Sbjct: 501 ADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQIM 544
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQ-NCPHTLDGRTIDPKPCNP 278
YFS +G +I+ +M + +T RSRGFGF+TF + ++V + + H L G+ ++ K P
Sbjct: 531 YFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVP 590
Query: 279 RTL-----QKPKKNSSFPKVFLGGLPSNVTETDL 307
+ + + S + GGL ++ TD
Sbjct: 591 KRVAYDFNSNSGQTSGYDMYRCGGLYDDIIGTDF 624
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 137 GAPPQQTGYGSYGPTSGAPQSGYGNNWNWNMPQNGPTTPAAGGPPAGGATGAAPTGPNPS 196
G + YG G G + MP+ G + GG G+
Sbjct: 11 GETDFEQHYGDNGDQLGMAEH---TEMQQEMPEQGMESAELGGSQHAGSC---------E 58
Query: 197 GPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVG 256
+ K ++ T + + YFS++GEV D + + TGRSRGFGFVTF D V
Sbjct: 59 DEESRKIFVGGLSWETTVKDMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDSTCVN 118
Query: 257 VVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
VI+ HTL G+ IDPK R ++P K K+F+GGL V E ++R F++YGK
Sbjct: 119 RVIEQTQHTLHGKNIDPKRAKARPGREPVK-----KIFVGGLDPEVPEDEIRQHFSKYGK 173
Query: 317 VMEVVI 322
V EV +
Sbjct: 174 VEEVEL 179
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FAD V + HT+DGR ++ K
Sbjct: 24 REYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA-AVAERVTMDKHTIDGRMVEAKKAV 82
Query: 278 PRTLQK--PKKNSSFP---------KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR K N S K+F+GGLPS+VTE D R +F ++G + +VV+M
Sbjct: 83 PRDDHSIVSKSNGSSTGSPGPGRTRKIFVGGLPSSVTEADFRRYFEQFGIITDVVVM 139
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 124 RRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAV 183
Query: 278 PR 279
P+
Sbjct: 184 PK 185
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 197 GPSAGKPPADYS--------AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVT 248
G PAD S A+ T + ++F +YG + D V+MK+ T RGFGFVT
Sbjct: 71 GKDVAAEPADGSGKIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVT 130
Query: 249 FADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLR 308
F+DP+ + V+++ HT+DGRT++ K PR K K+F+GG+P+++TE L+
Sbjct: 131 FSDPSVIDRVLED-EHTIDGRTVEVKRTVPREEMSTKDGPKTRKIFVGGIPTSLTEGKLK 189
Query: 309 TFFNRYGKVMEVVIM 323
F+ YGKV E IM
Sbjct: 190 EHFSSYGKVEEHQIM 204
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V + +M ++ TGRSRGFGFVTF + V V+ + H L G+ ++ K
Sbjct: 189 KEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRA 248
Query: 277 NPR 279
P+
Sbjct: 249 EPK 251
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF R+GEV + V+M++ TGR+RGFGFV FAD + + H +DGR ++ K PR
Sbjct: 25 YFGRFGEVTEAVIMRDRNTGRARGFGFVVFADS-GIAERVTLDKHMIDGRMVEAKKAVPR 83
Query: 280 TLQK--PKKNSSF--------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K NSS K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 84 DDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 137
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 122 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 181
Query: 278 PR 279
P+
Sbjct: 182 PK 183
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
PN P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TFA+P
Sbjct: 53 PNGGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEP 112
Query: 253 NNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+V V++ CP HTLDG+ IDPK P+ + K+ + K+F+GG+ + + +++ +F
Sbjct: 113 GSVDKVLK-CPIHTLDGKKIDPKHATPKN--RAKQANRTKKIFVGGVSQDTSSDEVKAYF 169
Query: 312 NRYGKVME-VVIMSPRTIR 329
N++GKV E V++M +T R
Sbjct: 170 NQFGKVEETVMLMDQQTKR 188
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + ++ K P+
Sbjct: 168 YFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 227
Query: 280 TLQKP 284
+P
Sbjct: 228 EAVQP 232
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++ ++GE++D VVMK+ +T RS+GFGF+T++ + V N PH +DGR ++PK
Sbjct: 34 KEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAV 93
Query: 278 PR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR +++P+ +++ K+F+ GL ++ E DLR +F+ +G ++ V +++ +
Sbjct: 94 PREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK 143
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS +G ++ V+ + ETG+ RGFGFV F D + V V H + + +D K
Sbjct: 125 REYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAI 184
Query: 278 PRT 280
+T
Sbjct: 185 SKT 187
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL T++ L+ F+ ++G++++VV+M P+T R+
Sbjct: 18 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRS 57
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 189 APTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVT 248
AP + G S GK A T +YF +YGE+ D VVMK+ +TGR RGFGF+T
Sbjct: 6 APKTHSDDGASPGKIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFIT 65
Query: 249 FADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLR 308
+ADP+ V VIQ H ++G+ ++ K PR + + K+F+GG+ ++V+E + +
Sbjct: 66 YADPSVVDEVIQET-HIINGKQVEIKRTIPRGSSQSNDFKT-RKIFVGGILTSVSEDEFK 123
Query: 309 TFFNRYGKVMEVVIMSPRTIR 329
FF++YGKV+E I+ +
Sbjct: 124 NFFSKYGKVVEHEIIHDHVTK 144
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG+V++ ++ ++ T RSRGFGF+ F + V ++ N G ID +
Sbjct: 123 KNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTN------GNMIDMEGTQ 176
Query: 278 PRTLQ-KPKKNSSFP 291
+ +PKK+SS P
Sbjct: 177 VEIKKAEPKKSSSNP 191
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF R+GEV + V+M++ TGR+RGFGFV FAD + + H +DGR ++ K PR
Sbjct: 25 YFGRFGEVTEAVIMRDRNTGRARGFGFVVFADS-GIAERVTLDKHMIDGRMVEAKKAVPR 83
Query: 280 TLQK--PKKNSSF--------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K NSS K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 84 DDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 137
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 122 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 181
Query: 278 PR 279
P+
Sbjct: 182 PK 183
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H++ +TIDPK
Sbjct: 38 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAF 97
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR Q PK + K+F+GGL +N D++ +F ++GKV + ++M +T
Sbjct: 98 PRRAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKT 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGF+TF + V V + H ++ + +
Sbjct: 121 TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV 180
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 181 ECKKAQPKEVMFP 193
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 199 SAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVV 258
S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+ + V
Sbjct: 54 SSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 113
Query: 259 IQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
+++ H +DGRT++ K PR K K+F+GGLP ++TE +L+ F+ YGKV+
Sbjct: 114 LED-DHVIDGRTVEVKRTVPREEMTTKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGKVV 172
Query: 319 EVVIM 323
E IM
Sbjct: 173 EHQIM 177
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG+V++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K P
Sbjct: 164 HFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 223
Query: 279 R 279
+
Sbjct: 224 K 224
>gi|340377267|ref|XP_003387151.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Amphimedon
queenslandica]
Length = 403
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQ---NCPHTLDGRTIDPK 274
+ YF ++G +++C +MK+ TG+SRGFGF+TF D N++ +++ P +D + IDPK
Sbjct: 71 EAYFKKFGVILECTIMKDG-TGKSRGFGFITFKDANSIQCILEAHAESPIIIDDKMIDPK 129
Query: 275 PCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P P+ KP S ++F+GGL S+ E D++ FF +G V EV +M
Sbjct: 130 PAVPKRGNKPTPASQIRRIFVGGLSSDTDEDDMKEFFEVFGPVEEVQLM 178
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++GEV +C VM+++ TGRSRGFGF+TF DP V V+ H LDG+ IDPK PR
Sbjct: 18 YFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVK-EHYLDGKIIDPKRAIPR 76
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q+ K+F+GG+ + TE + R FF+ +G+V++ +M
Sbjct: 77 EEQEKTA-----KMFVGGVSQDCTEDEFREFFSAFGRVIDATLM 115
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS +G VID +M + +TGR RGFGFVTF V + + + I+ K
Sbjct: 100 REFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKRAT 159
Query: 278 PRTLQKPKKNSS 289
P+ K + N+
Sbjct: 160 PKGNIKERVNTK 171
>gi|403415424|emb|CCM02124.1| predicted protein [Fibroporia radiculosa]
Length = 532
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 12/165 (7%)
Query: 167 MPQNGPTTPAAGGPPAGGATGAAPTG-PNPSGPSAGKPPADY----SAYGTYAQYQQRYF 221
+P + ++ AGG A T G P PS K ++ T + ++YF
Sbjct: 82 LPHHQSSSRPAGGTDAIDVTAHDDAGLRRPVRPSEMKDEGKLFVGGLSWDTTDEGLRKYF 141
Query: 222 SRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTL 281
S +G+V DC ++++++ GRSRGF F+TF DP++V V+ H LDG+ IDPK PR
Sbjct: 142 SEFGKVEDCTILRDHD-GRSRGFAFLTFEDPSSVNAVMVR-EHILDGKAIDPKRAIPR-- 197
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++ +N+ + F+GGL T +R FF+ YGKV++ +M R
Sbjct: 198 EEHLRNTRY---FVGGLSHATTSDSMRAFFSAYGKVVDCTVMVDR 239
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +FS YG+V+DC VM + E+GRS+GFGFVTF D +N ++ LD
Sbjct: 212 SHATTSDSMRAFFSAYGKVVDCTVMVDRESGRSKGFGFVTFEDASNTDQLVGRGDLILDD 271
Query: 269 RTIDPKPCNPRT 280
+ I+ K PR+
Sbjct: 272 KMIEVKVAQPRS 283
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP 252
PN P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TFA+P
Sbjct: 53 PNGGDPAPGKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEP 112
Query: 253 NNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+V V++ CP HTLDG+ IDPK P+ + K+ + K+F+GG+ + + +++ +F
Sbjct: 113 GSVDKVLK-CPIHTLDGKKIDPKHATPK--NRAKQANRTKKIFVGGVSQDTSSDEVKAYF 169
Query: 312 NRYGKVME-VVIMSPRTIR 329
N++GKV E V++M +T R
Sbjct: 170 NQFGKVEETVMLMDQQTKR 188
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPH 264
YF+++G+V + V++ + +T R RGFGFVTF + + V V + H
Sbjct: 168 YFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFH 212
>gi|414590674|tpg|DAA41245.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 470
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+G+V + V+M++ TGR+RGFGFV FAD + + H +DGR ++ K
Sbjct: 23 REYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADS-GIAERVTMEKHMIDGRMVEAKKAV 81
Query: 278 PRTLQK--PKKNSSF--------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K NSS K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 82 PRDDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 137
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 122 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 181
Query: 278 PR 279
P+
Sbjct: 182 PK 183
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK PR
Sbjct: 48 YFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPR 107
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 108 RAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 150
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 194
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 195 PKEVMLP 201
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + +RYF ++G V C VM++ +GRSRGF FVTF+DP +V V+ H LDG+
Sbjct: 8 WDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVR-EHFLDGK 66
Query: 270 TIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
IDPK PR Q S K F+GGLP VT+ + F ++G V++ +M
Sbjct: 67 IIDPKRAIPRPEQ-----SKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVM 115
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++ F ++G V+D VM + +TGR RGFGFVTF + + V + + P LDG+ I+ K
Sbjct: 100 KQLFQQFGHVLDSTVMMDKDTGRPRGFGFVTFENDDGVENTLAHQPLLLDGKQIEVKRAQ 159
Query: 278 PR 279
R
Sbjct: 160 SR 161
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 68/128 (53%), Gaps = 24/128 (18%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+FS YGEV VM++ TGR RGFGFV FADP V +Q+ PHTLDGRT+D K
Sbjct: 24 EHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRALQD-PHTLDGRTVDVKRALS 82
Query: 279 RTLQKPKKNSS-----------------------FPKVFLGGLPSNVTETDLRTFFNRYG 315
R Q+ K ++ K+F+GGLPS +TE R +F +G
Sbjct: 83 REEQQASKAANPSGGRNSGGGGGGGGGSDASGARTKKIFVGGLPSTLTEDGFRQYFETFG 142
Query: 316 KVMEVVIM 323
V +VV+M
Sbjct: 143 IVTDVVVM 150
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D VVM + T R RGFGF+TF + V V+Q H L G+ ++ K
Sbjct: 135 RQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQKTFHDLGGKLVEVKRAL 194
Query: 278 PR 279
PR
Sbjct: 195 PR 196
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK PR
Sbjct: 48 YFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPR 107
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 108 RAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 150
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 194
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 195 PKEVMLP 201
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A ++YF +G+V + ++MK+ T RSRGFGF+TF+D V V+ HTLDG+ I
Sbjct: 229 TSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEKVLAVPIHTLDGKKI 288
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
DPK P+ +PK S K+F+GG+ + T +++ +F+++GKV E V++M T R
Sbjct: 289 DPKHATPK--NRPKAGSKTKKIFVGGVSQDTTADEVKAYFSQFGKVEETVMLMDQHTKR 345
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YFS++G+V + V++ + T R RGFGFVTF + + V + + HT+ + +
Sbjct: 317 TTADEVKAYFSQFGKVEETVMLMDQHTKRHRGFGFVTFENDDIVDTICEIHFHTIKNKKV 376
Query: 272 DPKPCNPRTLQKP 284
+ K P+ L +P
Sbjct: 377 ECKKAQPKELVQP 389
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + + + RGF F+TF + V V++ HT+ G + K
Sbjct: 171 REYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 230
Query: 278 PRTL 281
P+ +
Sbjct: 231 PKEV 234
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K + K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKAPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G ++DCVVM + + RSRGFGFVTF + +V V+ + PH + GR IDPK PR
Sbjct: 38 YFDKFGNIVDCVVMTDAQGTRSRGFGFVTFKEAASVEQVLASGPHEIAGRVIDPKRALPR 97
Query: 280 -----------TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ + KVFLGGLP + E +++ FF++YG V +V+I R
Sbjct: 98 HHHDDPHQQQQQQPQQHRQPRVRKVFLGGLPHDAKEEEIKDFFSKYGDVEDVIIQYDRI 156
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT---LDGRTIDPKPC 276
+FS+YG+V D ++ + +GR RGFGFV F + V ++ + G+ ++ K
Sbjct: 139 FFSKYGDVEDVIIQYDRISGRPRGFGFVVFENDATVDQLVTSSERVYVEFKGKRVEIKRA 198
Query: 277 NPR 279
P+
Sbjct: 199 FPK 201
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + + + RGF F+TF + V V++ HT+ G + K
Sbjct: 171 REYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 230
Query: 278 PRTL 281
P+ +
Sbjct: 231 PKEV 234
>gi|392563464|gb|EIW56643.1| hypothetical protein TRAVEDRAFT_128184 [Trametes versicolor
FP-101664 SS1]
Length = 216
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 76/115 (66%), Gaps = 7/115 (6%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ ++YFS +GEV DC ++++ + GRSRGF F+TF +P +V V+ H LDG+TI
Sbjct: 25 TDAEGLRKYFSEFGEVEDCTILRDQD-GRSRGFAFLTFKEPASVNAVMCR-EHVLDGKTI 82
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK PR ++ +N+ + F+GGL + T +RTFF++YGKV++ +M R
Sbjct: 83 DPKRAIPR--EEHLRNTRY---FVGGLSHSTTSESMRTFFSQYGKVVDCTVMVDR 132
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
++ T ++ + +FS+YG+V+DC VM + ETGRS+GFGFVTF D +N ++
Sbjct: 105 SHSTTSESMRTFFSQYGKVVDCTVMVDRETGRSKGFGFVTFEDASNTEQLV 155
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+D +M++N TG+SRGFGF+TF DP +V VI+ H LDG+ IDPK R
Sbjct: 180 YFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKR-DHILDGKLIDPKRAIAR 238
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E + FF+++G +++ +M
Sbjct: 239 EEQ-----DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 277
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + +TGRSRGFGF+T+ P+ V V N TL G++++ K PR
Sbjct: 264 FFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAEPR 323
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++GE+ID VVMK+ + +SRGFGFVT+ D ++V N PHT+DG+ +D K PR
Sbjct: 33 YYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPR 92
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ +++ K+F+G L +VT DL +F+++G V + I+
Sbjct: 93 EETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIV 136
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G V D ++ +T SRGF FVTF D + V VI PHT+ D + R
Sbjct: 123 YFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSR 182
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + +++F ++GE++D VVMK+ T RSRGFGF+T++ + V + PH +DGR
Sbjct: 28 YRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDDAQNDRPHKVDGR 87
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL +V E DLR F YG ++ I++ +
Sbjct: 88 VVEPKRAVPRQDIGRPEAGATVKKLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTDK 145
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 221 FSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
F YG ++ C ++ + +TG+ RGFGF+ F D + V + H + G+ ID K
Sbjct: 130 FKSYGTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDKICLYRHHQIHGKHIDVKKA 185
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE++D VVMK+ T RSRGFGF+T+ +P V N PH +DG+T++ K PR
Sbjct: 36 FYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPR 95
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
P+ + + K+F+GGL +VT +LR +F++YG + E +++
Sbjct: 96 EDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVA 141
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YFS+YG + +C V+ E+G SRGFGFVTF D + V I PH + D K
Sbjct: 125 REYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP-RTIRA 330
++ F K+F+GGL TE L+ F++++G++++VV+M RT R+
Sbjct: 11 RRTEQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRS 57
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YFS++GEVID +M+ + TGRSRGFGF+TFA+P +V V++ H LDG+
Sbjct: 137 WDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVK-TEHVLDGK 195
Query: 270 TIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
IDPK PR Q K+F+GG+ V + FF ++G +++ +M
Sbjct: 196 VIDPKRAIPRDEQDKT-----GKIFVGGIAPEVRPKEFENFFGKFGTIIDAQLM 244
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G +ID +M + +TGRSRGFGFVTF P+ V V Q +GR I+ K
Sbjct: 229 ENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTFDAPDAVDRVCQGRYLDFNGRQIEVKRAE 288
Query: 278 PR 279
PR
Sbjct: 289 PR 290
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YFS++GEV++C VM+++ +GRSRGFGF+TF DP V +V+ H LDG+ +
Sbjct: 123 TTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK-EHFLDGKIV 181
Query: 272 DPKPC-----NPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PC +P+ + K+F+GG+ + T+ + R +F ++G+V++ +M +
Sbjct: 182 SLLPCHNPCIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDK 241
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V I N P + G+ I
Sbjct: 217 TTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACI-NVPLEIHGKPI 275
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNV 302
+ K PR + ++ ++ F G +V
Sbjct: 276 EVKKAQPRGNLREEEEAAKRGKFRKGEEQSV 306
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 4/149 (2%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + ++YF ++GE++D VVMK+ +T RSRGFGF+T+A + V PH +DGR
Sbjct: 17 YKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQGARPHKIDGR 76
Query: 270 TIDPKPCNPRT-LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME--VVIMSPR 326
T++PK P+T + KP+ ++ K+F+G L ++TE DL+ +F+ YG V +V+
Sbjct: 77 TVEPKRAVPKTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPYGNVTSAALVVHKET 136
Query: 327 TIRAGITRVPTQEL-PVQKEATAVQQVLR 354
+ G V + PV K +++
Sbjct: 137 GKKRGFGFVEFDDYDPVDKICLKGSHIIK 165
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YFS YG V ++ + ETG+ RGFGFV F D + V + H + G+ ID K
Sbjct: 116 KEYFSPYGNVTSAALVVHKETGKKRGFGFVEFDDYDPVDKICLKGSHIIKGKKIDVKKA 174
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL T+ +L+ +F ++G++M+VV+M P+T R+
Sbjct: 9 KLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRS 48
>gi|156361860|ref|XP_001625502.1| predicted protein [Nematostella vectensis]
gi|156212338|gb|EDO33402.1| predicted protein [Nematostella vectensis]
Length = 126
Score = 99.0 bits (245), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A T + +YF +GEV DCV+M + T RSRGFGFVTF DP + V+ PH LDG
Sbjct: 22 ATSTTKEGLHQYFENFGEVTDCVLMTDPTTKRSRGFGFVTFRDPATIESVLAKKPHILDG 81
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
+TIDPKP + +++ KVF+GGL TE DL+ +F+ YG V
Sbjct: 82 KTIDPKPA--------RGSANDGKVFIGGLAFGTTEEDLKEYFSTYGMV 122
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 172 PTTPAAGGPPAGGATGAAPTG-------PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRY 224
T GG A G TG + G ++GK A+ T + ++F +Y
Sbjct: 64 ETRSVVGGRGLAKAVGNVDTGGEDGRDADSSGGDASGKIFVGGVAWETTEETFTKHFQKY 123
Query: 225 GEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKP 284
G + D V+MK+ T RGFGFVTF+DP+ + V+++ H +DGRT++ K P+
Sbjct: 124 GAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED-EHVIDGRTVEVKRTVPKEEMSS 182
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K K+F+GG+P ++TE L+ F+ YGKV+E IM
Sbjct: 183 KDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIM 221
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + V V+ + H L G+ ++ K
Sbjct: 206 KEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKA 265
Query: 277 NPR 279
P+
Sbjct: 266 EPK 268
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 172 PTTPAAGGPPAGGATGAAPTG-------PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRY 224
T GG A G TG + G ++GK A+ T + ++F +Y
Sbjct: 64 ETRSVVGGRGLAKAVGNVDTGGEDGRDADSSGGDASGKIFVGGVAWETTEETFTKHFQKY 123
Query: 225 GEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKP 284
G + D V+MK+ T RGFGFVTF+DP+ + V+++ H +DGRT++ K P+
Sbjct: 124 GAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED-EHVIDGRTVEVKRTVPKEEMSS 182
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K K+F+GG+P ++TE L+ F+ YGKV+E IM
Sbjct: 183 KDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIM 221
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + V V+ + H L G+ ++ K
Sbjct: 206 KEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKA 265
Query: 277 NPR 279
P+
Sbjct: 266 EPK 268
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGEV++ V+M++ TGR+RGFGFV FADP V+ + H +DGRT++ K
Sbjct: 23 KEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD-KHMIDGRTVEAKKAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q ++ K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVM 138
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
S K+F+GG+ + E L+ +F YG+V+E VIM RT
Sbjct: 3 SDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRT 42
>gi|432901707|ref|XP_004076907.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 279
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 168 PQNGPTTPAAGGPPAGGA-TGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGE 226
QNG A GG + + T + AGK ++ T + + YFS++GE
Sbjct: 22 DQNGAEQEAMGGDESQDSGTDGGKIDASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGE 81
Query: 227 VIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKK 286
V DC + ++ TGRSRGFGFV F D ++V V++ H LDGR IDPK R + K
Sbjct: 82 VSDCTIKMDSNTGRSRGFGFVLFKDSSSVDKVLEQKEHRLDGRQIDPK----RAM--AMK 135
Query: 287 NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
+ K+F+GGL TE +R +F +G++ + +
Sbjct: 136 KEAVRKIFVGGLNPEATEEAIREYFGAFGEIETIEL 171
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TYA + ++F RYGE+ D V+MK+ TG+ RGFGF+T+ADP+ V VI++ H + G+ +
Sbjct: 31 TYATFN-KHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDT-HVIHGKQV 88
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + K + K+F+GG+PS+VTE + + FF++YG+V+E I+
Sbjct: 89 EIKRTIPKGSGQSKDFKT-KKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQII 139
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPCNP 278
+FS+YG+V++ +++++ET RSRGFGF+ F V ++ N + G ++ K P
Sbjct: 126 FFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEP 185
Query: 279 RTLQKP 284
+ P
Sbjct: 186 KKASNP 191
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 26 YRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGR 85
Query: 270 TIDPKPCNPRT-LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI 328
++PK PRT + +P+ ++ K+F+GG+ + E DLR +F +YG V+ I+ +
Sbjct: 86 VVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKET 145
Query: 329 R 329
R
Sbjct: 146 R 146
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +YG V+ ++ + ET + RGF FV F D + V + + H + G+ ID K P+
Sbjct: 127 YFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHIDVKKALPK 186
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G+V + +VMK+ T RSRGFGFVTFAD +V V+ + PH LDG+ I
Sbjct: 13 TSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLASAPHELDGKKI 72
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR PK + K+F+GGL + T D++ +F ++G+V + ++M
Sbjct: 73 DPKVAFPRRAH-PKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRVEDAMLM 123
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G V D ++M + +T R RGF FVTF + V V + H ++ + ++ K P+
Sbjct: 110 YFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPK 169
Query: 280 TLQKP 284
+ P
Sbjct: 170 EVMLP 174
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 38 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 97
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 98 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 151
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 152 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 205
Query: 356 SSTT 359
T
Sbjct: 206 KFHT 209
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK
Sbjct: 56 RDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF 115
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 116 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 160
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 145 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 204
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 205 PKEVMLP 211
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PPAG A N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPAGTQYSAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQELPVQK 344
L TE +R +F +G++ + + M P++ R G + +E PV+K
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKK 210
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF R+GEV + V+M++ TGR+RGFGFV FAD + + H +DGR ++ K PR
Sbjct: 25 YFGRFGEVTEAVIMRDRNTGRARGFGFVVFADS-GIAERVTLDKHMIDGRMVEAKKAVPR 83
Query: 280 TLQK--PKKNSSF--------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K NSS K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 84 DDQSIASKNNSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 137
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 122 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 181
Query: 278 PR 279
P+
Sbjct: 182 PK 183
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T ++ YF +G+V D ++MK+ T RSRGFGF+TF +PN+V
Sbjct: 162 SDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSV 221
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ K + N + K+F+GG+ + + +++ +F+++G
Sbjct: 222 DKVLKVPIHTLDGKKIDPKHATPKNRPKTQSNKT-KKIFVGGVSQDTSAEEVKQYFSQFG 280
Query: 316 KVME-VVIMSPRTIR 329
KV E V++M +T R
Sbjct: 281 KVEETVMLMDQQTKR 295
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ ++YFS++G+V + V++ + +T R RGFGFVTF + V V + HT+ + +
Sbjct: 267 TSAEEVKQYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKV 326
Query: 272 DPKPCNPRTLQKPKKNSSFPK-VFLGGL 298
+ K P+ P K + LG L
Sbjct: 327 ECKKAQPKEAVTPTAQQLLQKRIILGNL 354
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
+Y T +FS++G++ DCVVM++ T RSRGFGFVTF V + N PH LDG
Sbjct: 20 SYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMVDDCMSNRPHKLDG 79
Query: 269 RTIDPKPCNPRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++ K R +P + S ++F+GG+ NVT D+ +F +YGKV V ++ +
Sbjct: 80 REVEAKRAVSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDK 138
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +YG+V ++++ +G+ RGFGFV F D + V ++Q H + G +I+ +
Sbjct: 122 YFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKAFSK 181
Query: 280 TLQKPK 285
Q K
Sbjct: 182 EDQTRK 187
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL N TE L FF+++GK+ + V+M P T R+
Sbjct: 13 KLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRS 52
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV D VVM + +T +SRGFGFVTF V V+ PH LDGRT+ PK R
Sbjct: 40 YFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRTVTPKRAVSR 99
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
+KP +++ K+F+GG+ + TE L+ F ++G V V +M R R
Sbjct: 100 EDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETR 150
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q+ + +F ++G V VM++ ET + RGF FVTFAD + V ++ HT++G
Sbjct: 123 TTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTINGHNC 182
Query: 272 DPKPCNPRTLQKPKKN 287
+ + P+ KN
Sbjct: 183 EVRKALPKNELDKHKN 198
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
+Y T +FS++G++ DCVVM++ T RSRGFGFVTF V + N PH LDG
Sbjct: 20 SYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMVDDCMSNRPHKLDG 79
Query: 269 RTIDPKPCNPRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++ K R +P + S ++F+GG+ NVT D+ +F +YGKV V ++ +
Sbjct: 80 REVEAKRAVSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDK 138
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +YG+V ++++ +G+ RGFGFV F D + V ++Q H + G +I+ +
Sbjct: 122 YFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKAFSK 181
Query: 280 TLQKPK 285
Q K
Sbjct: 182 EDQTRK 187
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL N TE L FF+++GK+ + V+M P T R+
Sbjct: 13 KLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRS 52
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 172 PTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCV 231
P T A G G + + P +AGK ++ T ++ ++YF +G + D +
Sbjct: 31 PETAAVNGNGTGSGNEGSSS-PGADSTAAGKLFVGGLSWQTSSEKLRQYFGMFGNITDVL 89
Query: 232 VMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFP 291
+MK+ T RSRGFGF+TF +P++V V++ HTLDG+ IDPK P+ + K N
Sbjct: 90 IMKDPVTQRSRGFGFITFEEPSSVENVLKVPVHTLDGKKIDPKHATPK--GRGKTNGKTK 147
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
K+F+GG+ + + +++ +F+++GKV E V++M +T R
Sbjct: 148 KIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKR 186
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G+V + V++ + +T R RGFGFVTF + V V + H + + ++ K P+
Sbjct: 166 YFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDRVCEIHFHNIKNKKVECKKAMPK 225
Query: 280 TL 281
+
Sbjct: 226 EV 227
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N + P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TF++P+
Sbjct: 34 NSNDPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPS 93
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNR 313
+V V++ HTLDG+ IDPK P+ +PK+ + K+F+GG+ + + +++ +F++
Sbjct: 94 SVDNVLKVPIHTLDGKKIDPKHATPK--NRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQ 151
Query: 314 YGKVME-VVIMSPRTIR 329
+GKV E V++M +T R
Sbjct: 152 FGKVEETVMLMDQQTKR 168
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YFS++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 140 TSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 199
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ + ++ L GL
Sbjct: 200 ECKKAQPKEAVQASAQLLGKRLMLSGL 226
>gi|358339826|dbj|GAA47814.1| RNA-binding protein Musashi [Clonorchis sinensis]
Length = 295
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YF R+GEV +C++M++ T RSRGFGFVTF D V V+++ PH LD + I
Sbjct: 21 TTADKLREYFQRFGEVKECMIMRDPLTKRSRGFGFVTFCDSVCVEKVLESAPHFLDSKKI 80
Query: 272 DPKPCNPRTLQKPKKNSSF----PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK PR KP +N+ +VF+GG+ + T +L +F++YGK+ +M
Sbjct: 81 DPKLAVPR---KPGQNAKLTTRTKRVFIGGVATQTTNEELSEYFSQYGKIESCELM 133
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+S++GE+ D VVMK+ + +SRGFGFVTF + ++V + PH +DG+ +D K PR
Sbjct: 32 YYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQADRPHKVDGKDVDSKRAMPR 91
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
P+ +++ K+F+GGL +VT DL +F ++G V + I+ +
Sbjct: 92 EETSPEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAK 138
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G V D ++ +T SRGF FVTF D ++V VI PH + G D + R
Sbjct: 122 YFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSR 181
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K + K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKAPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVP-TQELPVQK 344
L TE +R +F +G++ + + M P+ R G + +E PV+K
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N + P+ GK ++ T ++ + YF +G V D ++MK+ T RSRGFGF+TF++P+
Sbjct: 49 NSNDPAPGKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPS 108
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNR 313
+V V++ HTLDG+ IDPK P+ +PK+ + K+F+GG+ + + +++ +F++
Sbjct: 109 SVDNVLKVPIHTLDGKKIDPKHATPK--NRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQ 166
Query: 314 YGKVME-VVIMSPRTIR 329
+GKV E V++M +T R
Sbjct: 167 FGKVEETVMLMDQQTKR 183
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YFS++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 155 TSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 214
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ + ++ L GL
Sbjct: 215 ECKKAQPKEAVQASAQLLGKRLMLSGL 241
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YG++ + +VMK+ T RSRGFGF+TFADP +V V+ H LDG+ IDPK
Sbjct: 39 REYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++ +F ++G + + ++M
Sbjct: 99 PRRTH-PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLM 143
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 128 KNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMLP 194
>gi|299741117|ref|XP_001834228.2| hnRNP A1-gamma isoform [Coprinopsis cinerea okayama7#130]
gi|298404562|gb|EAU87631.2| hnRNP A1-gamma isoform [Coprinopsis cinerea okayama7#130]
Length = 494
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 13/123 (10%)
Query: 201 GKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQ 260
GK P++ G Y F ++G+V C +M++ TG SRGF F+TF DPN V +V++
Sbjct: 118 GKKPSEMHDAGDY-------FEQFGKVDACTIMRDPNTGTSRGFAFLTFEDPNCVDLVLK 170
Query: 261 NCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 320
H+LDG+ IDPK PR ++ +N+ F F+GGL + T ++ FF+ YGKV++
Sbjct: 171 QS-HSLDGKAIDPKRAIPR--EEHLRNTRF---FVGGLAHSTTSESMKAFFSSYGKVVDA 224
Query: 321 VIM 323
+M
Sbjct: 225 TVM 227
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADP-NNVGVVIQNCPHTLD 267
A+ T ++ + +FS YG+V+D VM + ETGRS+GFGFVTF D ++ ++ LD
Sbjct: 203 AHSTTSESMKAFFSSYGKVVDATVMMDKETGRSKGFGFVTFEDVGTSLNHIVGKIGLVLD 262
Query: 268 GRTIDPKPCNPRTLQKPKKN 287
+ I+ + R + +N
Sbjct: 263 DKEIEIRLAQARNQRDQTRN 282
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE+ D VVM++ + RSRGFGFVT+ADP V + PH +DG+ ++PK P+
Sbjct: 46 FYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQVNAAMAARPHLIDGKEVEPKRAMPK 105
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
+ KP+ + S KV++ G+ TE LR +F +YG V EV I
Sbjct: 106 DVMNKPEAHISVKKVYISGIKDEHTEDMLREYFMQYGSVQEVDI 149
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 31/40 (77%)
Query: 284 PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+K+ K+F+GG+ N ++ DLRTF++++G++ +VV+M
Sbjct: 20 PEKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVM 59
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
+ YF +YG V + + + TG+ RGF FVTF D + V V+ H +D + D K
Sbjct: 135 REYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVLEKSHMIDNKRCDVKKA 193
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + + + RGF F+TF + V V++ HT+ G + K
Sbjct: 171 REYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 230
Query: 278 PRTL 281
P+ +
Sbjct: 231 PKEV 234
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YG++ + +VMK+ T RSRGFGF+TFADP +V V+ H LDG+ IDPK
Sbjct: 39 REYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGTHELDGKKIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++ +F ++G + + ++M
Sbjct: 99 PRRTH-PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLM 143
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 128 KNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMLP 194
>gi|221220626|gb|ACM08974.1| DAZ-associated protein 1 [Salmo salar]
Length = 90
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 56/86 (65%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
N +G GK + T + + YFS+YGEV+DCV+MK+ T +SRGFGFV F DPN
Sbjct: 4 NLAGDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPR 279
V V++ PH LDGR IDPKPC PR
Sbjct: 64 CVRTVLETKPHNLDGRNIDPKPCTPR 89
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GGL + T+ LR +F++YG+V++ VIM +T
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKT 47
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YFS++G+VID +MK+N TGRSRGFGF+TFA ++V V++ H LDG+ I
Sbjct: 117 TTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVLKKT-HVLDGKLI 175
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
DPK P+ Q K+F+GG+ VTE + +F ++G +++ +M
Sbjct: 176 DPKRAIPKEEQ-----DKTGKIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLM 222
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A++ + YF ++G +ID +M + +TGRSRG+GFVT+ P+ V V QN G+ +
Sbjct: 202 TEAEFTE-YFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQNKYVLFHGKNM 260
Query: 272 DPKPCNPRTLQK 283
+ K PR QK
Sbjct: 261 EIKRAEPRNQQK 272
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+ YG+V++ V+MK+ TGR RGFGF+ FADP+ VI+ H +DGR ++ K
Sbjct: 23 KEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE-KHNIDGRMVEAKRAV 81
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR Q +S K+F+GGL S VTE++ + +F+++G + +VV+M
Sbjct: 82 PRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDH 141
Query: 326 RTIR---AGITRVPTQELPVQKEATAVQQVLRRS 356
T+R G ++E AV++VL ++
Sbjct: 142 NTLRPRGFGFITYDSEE--------AVEKVLIKT 167
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 123 KNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAV 182
Query: 278 PRTLQ 282
P+ L
Sbjct: 183 PKELS 187
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAG-------------ITRVPTQ 338
K+F+GG+ + E L+ +FN YG V+E VIM RT G RV +
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 339 ELPVQKEATAVQQVLRRSSTTKVQAPFGATTLSP 372
+ + ++ + R+ V G+ +SP
Sbjct: 67 KHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSP 100
>gi|257215987|emb|CAX83143.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215989|emb|CAX83144.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215991|emb|CAX83145.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215993|emb|CAX83146.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215995|emb|CAX83147.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215997|emb|CAX83148.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215999|emb|CAX83149.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216001|emb|CAX83150.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216003|emb|CAX83151.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216005|emb|CAX83152.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 168
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++GE++D VVMK+ T RSRGFGF+T+ +P V N PH +DG+T++ K PR
Sbjct: 36 FYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPR 95
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
P+ + + K+F+GGL +VT +LR +F++YG + E +++
Sbjct: 96 EDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVA 141
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
+ YFS+YG + +C V+ E+G SRGFGFVTF D + V I
Sbjct: 125 REYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAI 166
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 284 PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP-RTIRA 330
++ F K+F+GGL TE L+ F++++G++++VV+M RT R+
Sbjct: 10 DRRTEQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRS 57
>gi|405957004|gb|EKC23243.1| Heterogeneous nuclear ribonucleoprotein A/B [Crassostrea gigas]
Length = 475
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV +CV+ ++ ET RSRGFGFV F DP+ V V+ H L GR IDPK NPR
Sbjct: 77 YFTKFGEVENCVLKQDLETKRSRGFGFVVFKDPSTVDKVLDEKTHNLGGRNIDPKKANPR 136
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 320
KK K+F+G + ++TE +++ +F +G+V ++
Sbjct: 137 -----KKEEVIKKIFVGKVDPSLTEAEIKEYFETFGEVKKI 172
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK
Sbjct: 60 RDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF 119
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 120 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 164
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 149 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 208
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 209 PKEVMLP 215
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 47 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 106
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 160
Query: 298 LPSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRR 355
L TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEK 214
Query: 356 SSTT 359
T
Sbjct: 215 KFHT 218
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TYA + ++F +YG++ D V+MK+ TG+ RGFGF+T+ADP+ V VI++ H ++G+ +
Sbjct: 31 TYATFN-KHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDT-HVINGKQV 88
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + K + K+F+GG+PS VTE + + FF++YGKV+E I+
Sbjct: 89 EIKRTIPKGSGQSKDFKT-KKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQII 139
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +FS+YG+V++ +++++ET RSRGFGF+ F V +I + G ++ K
Sbjct: 124 KNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKA 183
Query: 277 NPRTLQKP 284
P+ P
Sbjct: 184 EPKKASNP 191
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK
Sbjct: 46 RDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF 105
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 106 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 150
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 194
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 195 PKEVMLP 201
>gi|332840634|ref|XP_003314028.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pan
troglodytes]
Length = 324
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 224 YGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQK 283
+GEV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK PR Q
Sbjct: 5 FGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQ- 63
Query: 284 PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PK + K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 64 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 107
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + +
Sbjct: 82 TTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 141
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 142 ECKKAQPKEVMSP 154
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F +YG++ID V+MK+ T + RGFGF+TFADP V VI++ H ++G+ ++ K
Sbjct: 31 KEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRVIED-EHVINGKLVEIKRTI 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P+ P K+ K+F+GGLPS + E + + FF+++GKV+E I+ T
Sbjct: 90 PKGAA-PLKDFKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHT 138
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD--GRTIDPKP 275
+ +FS++G+V++ +++++ T RSRGFGF+ F V ++ + +D G ++ K
Sbjct: 119 KEFFSKFGKVVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLAKKGNMIDLNGSQVEIKK 178
Query: 276 CNPR 279
P+
Sbjct: 179 AEPK 182
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ Q YFS++GE+ + +VM++ RSRGFGFVTF D N V V++ H LD + I
Sbjct: 54 TTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYNGVIKVLKQENHILDSKKI 113
Query: 272 DPKPCNPRTLQKPKKNSS-FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
DPK P+++ +P+K S+ K+F+GG+ ++ T ++R +FNRYG+V +M +
Sbjct: 114 DPKLAVPKSICQPEKISARTKKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDK 169
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF+RYGEV +C +M + T R RGFGFVTF D + + Q H ++ + ++ K
Sbjct: 151 RQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQICQIHYHNINNKMVEAKKAL 210
Query: 278 PRTL 281
P+ L
Sbjct: 211 PKEL 214
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 192 GPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFAD 251
G +P+ G P D + GT+ +Y F +YGE++D V+MK+ T + RGFGF+TFAD
Sbjct: 11 GASPAKIFIGGLPKD-TTMGTFKEY----FGKYGEIVDAVIMKDRFTQKPRGFGFITFAD 65
Query: 252 PNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
P V VI++ H ++G+ ++ K P+ P K+ K+F+GGLPS + E + + FF
Sbjct: 66 PAVVDRVIEDN-HVINGKEVEIKRTIPKGAA-PLKDFKTKKIFVGGLPSALKEDEFKEFF 123
Query: 312 NRYGKVMEVVIMSPRT 327
+++GKV+E I+ +
Sbjct: 124 SKFGKVVEHEIIRDHS 139
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD--GRTIDPKP 275
+ +FS++G+V++ +++++ T RSRGFGFV F V ++ + +D G ++ K
Sbjct: 120 KEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGNMIDLNGSQVEIKK 179
Query: 276 CNPR 279
P+
Sbjct: 180 AEPK 183
>gi|222623166|gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
Length = 459
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 13/135 (9%)
Query: 192 GPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFAD 251
G +P+ G P D + GT+ +Y F +YGE++D V+MK+ T + RGFGF+TFAD
Sbjct: 11 GASPAKIFIGGLPKD-TTMGTFKEY----FGKYGEIVDAVIMKDRFTQKPRGFGFITFAD 65
Query: 252 PNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQK---PKKNSSFPKVFLGGLPSNVTETDLR 308
P V VI++ H ++G+ ++ K RT+ K P K+ K+F+GGLPS + E + +
Sbjct: 66 PAVVDRVIED-NHVINGKEVEIK----RTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFK 120
Query: 309 TFFNRYGKVMEVVIM 323
FF+++GKV+E I+
Sbjct: 121 EFFSKFGKVVEHEII 135
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD------GRTI 271
+ +FS++G+V++ +++++ T RSRGFGFV F V ++ + +D R
Sbjct: 120 KEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGNMIDLNGSQATRPS 179
Query: 272 DPKPCNP 278
P PC+P
Sbjct: 180 LPSPCHP 186
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+F+GGLP + T + +F +YG++++ VIM R
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDR 50
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FADP V+ H +DG+ ++ K
Sbjct: 23 REYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERVVL-LKHIIDGKIVEAKKAV 81
Query: 278 PRTLQKP--KKNSSF---------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR K NSS K+F+GGL S+VTE + + +F ++G + +VV+M
Sbjct: 82 PRDDHAVFNKSNSSLQGSPGPSTTKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDH 141
Query: 326 RTIR 329
RT R
Sbjct: 142 RTQR 145
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ +YF+++G + D VVM ++ T R RGFGF+++ + V V+Q H L+G+ +
Sbjct: 118 TEAEFK-KYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQKTFHELNGKMV 176
Query: 272 DPKPCNPRTL 281
+ K P+ +
Sbjct: 177 EVKLAVPKEM 186
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YG++ + +VMK+ T RSRGFGF+TFADP +V V+ H LDG+ IDPK
Sbjct: 39 REYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++ +F ++G + + ++M
Sbjct: 99 PRRTH-PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLM 143
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 128 KNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 187
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 188 PKEVMLP 194
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
TYA + ++F +YG++ D V+MK+ TG+ RGFGF+T+ADP+ V VI++ H ++G+ +
Sbjct: 31 TYATFN-KHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDT-HVINGKQV 88
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + K + K+F+GG+PS VTE + + FF++YGKV+E I+
Sbjct: 89 EIKRTIPKGSGQSKDFKT-KKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQII 139
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +FS+YG+V++ +++++ET RSRGFGF+ F V +I + G ++ K
Sbjct: 124 KNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKA 183
Query: 277 NPRTLQKP 284
P+ P
Sbjct: 184 EPKKASNP 191
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q+YFS++G ++ + + T RSRGF FVTFA+P +V V+++ PH LD RT+DPK
Sbjct: 90 QKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKVLESGPHQLDNRTVDPKRAL 149
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
P Q + K K+F+GGL + TE+ L+ FF+ +G +++V ++ + R
Sbjct: 150 PLHKQIQLKGQHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDVEFVTDKLTR 202
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK
Sbjct: 60 RDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF 119
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 120 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 164
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 149 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 208
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 209 PKEVMLP 215
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK
Sbjct: 47 RDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF 106
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 107 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 151
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 136 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 195
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 196 PKEVMLP 202
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++Y+ ++GE++D VVMK+N+TGRSRGFGFVT+ DP V N PH +DG+ ++ K
Sbjct: 34 RKYYEQWGELVDFVVMKDNKTGRSRGFGFVTYRDPEMVDEAQNNRPHEVDGKIVEAKRAM 93
Query: 278 PRTLQK-PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
PR P+ + + K+F+GGL +VT LR +F YG + + I++
Sbjct: 94 PREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTSYGTITDCEIVT 141
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
++ + YF+ YG + DC ++ ++G SRGFGFVTF D + V I PH + +D K
Sbjct: 122 EHLRHYFTSYGTITDCEIVTWKDSGESRGFGFVTFDDYDPVDKAILYKPHQIGSSRVDVK 181
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YF +YG +ID V+K+ T RSRGFGF+TFA+ ++V V+ HTLDG+ I
Sbjct: 34 TSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVLAVPAHTLDGKKI 93
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
DPK P+ K +S KVF+GG+ + + +++ +FN++G+V E V++M +T R
Sbjct: 94 DPKHATPKNKGKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKR 152
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YF+++G V + V++ + +T R RGFGFVTF + V + + HT+ + +
Sbjct: 124 TSADEVKAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKV 183
Query: 272 DPKPCNPR 279
+ K P+
Sbjct: 184 ECKKAQPK 191
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK
Sbjct: 46 RDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAF 105
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 106 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 150
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 194
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 195 PKEVMLP 201
>gi|395327711|gb|EJF60108.1| hypothetical protein DICSQDRAFT_63556 [Dichomitus squalens LYAD-421
SS1]
Length = 180
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS +GEV DC ++++ + GRSRGF F+TF DP +V V+ H LDG+TIDPK
Sbjct: 25 RKYFSEFGEVEDCTILRDQD-GRSRGFAFLTFKDPASVNAVMCR-EHILDGKTIDPKRAI 82
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR ++ +N+ + F+GGL + T +R FF++YGKV++ +M R
Sbjct: 83 PR--EEHLRNTRY---FVGGLSHSTTSDSMRAFFSQYGKVVDCTVMVDR 126
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
++ T + + +FS+YG+V+DC VM + E+GRS+GFGFVTF D +N ++
Sbjct: 99 SHSTTSDSMRAFFSQYGKVVDCTVMVDRESGRSKGFGFVTFEDASNTDQLV 149
>gi|443897375|dbj|GAC74716.1| nuclear porin [Pseudozyma antarctica T-34]
Length = 694
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYFS++GEV C VM++ TGRSRGF F+ F DP V V+ H LDG+ IDPK
Sbjct: 283 RRYFSQFGEVGHCTVMRDANTGRSRGFAFLNFVDPKAVNTVMVR-EHYLDGKVIDPKRAI 341
Query: 278 PRTLQKPKKN---------SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q ++ K+F+GGLP++VT RTFF ++G + E M R
Sbjct: 342 PRPQQSHHGLGGGFGAGQPAANQKLFVGGLPASVTPESFRTFFEQFGTLSECTCMMDR 399
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC--- 276
+F ++G + +C M + ETGR RGFGF+T+AD ++ ++ P DG+ +D K
Sbjct: 383 FFEQFGTLSECTCMMDRETGRPRGFGFLTYADDASLERILSANPIMFDGKEVDVKRAQSK 442
Query: 277 -NPRTLQ 282
+P++LQ
Sbjct: 443 NDPQSLQ 449
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 175 PAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMK 234
A G G + AGK ++ T + + YFS++GEV DC +
Sbjct: 46 DAEDGSSQNGGNEGGQIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKM 105
Query: 235 NNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVF 294
+ +TGRSRGFGF+ F D +V V++ H LDGR IDPK R + K K+F
Sbjct: 106 DQQTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRQIDPK----RAM--AMKKEIVKKIF 159
Query: 295 LGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPTQELPVQKEATAVQQV 352
+GGL ++++ ++ +F +G++ + + P+T R G + +E P +V++V
Sbjct: 160 VGGLKPDLSKEEIEEYFGAFGEIETIELPQDPKTEKRRGFVFITYKEEP------SVKKV 213
Query: 353 LRRSSTT 359
L + T
Sbjct: 214 LEKKYHT 220
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
Query: 161 NNWNWNMPQNGPTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRY 220
+N N QNG + + G + + +G + S P+ GK ++ T ++ + Y
Sbjct: 181 DNVNAVAVQNGSGVNLSNKSSSSGRSTPSNSGGSLSDPAPGKLFVGGLSWQTSSEKLKEY 240
Query: 221 FSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRT 280
F+ +G V D ++MK+ T RSRGFGF+TF +P V V++ HTLDG+ IDPK P+
Sbjct: 241 FNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN 300
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
+P++ + K+F+GG+ + + +++ +F+++G V E V++M +T R
Sbjct: 301 --RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKR 348
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 320 TSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 379
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 380 ECKKAQPKEAVTPAAQLLQKRIMLGTL 406
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 21/132 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+FS +GEV VM++ TGR RGFGFV +ADP V + PHTLDGRT+D K
Sbjct: 23 HEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLE-PHTLDGRTVDVKRAL 81
Query: 278 PRTLQKPKK--------------------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
R Q+ K + K+F+GGLPS++T+ + R +F +G V
Sbjct: 82 SREEQQASKAVNPSTGRNTGGGGGGNDASGTRTKKIFVGGLPSSLTDDEFRQYFQTFGAV 141
Query: 318 MEVVIMSPRTIR 329
+VV+M +T +
Sbjct: 142 TDVVVMYDQTTQ 153
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D VVM + T R RGFGF+TF + V V+ H L G+ ++ K
Sbjct: 132 RQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRAL 191
Query: 278 PR 279
PR
Sbjct: 192 PR 193
>gi|348526013|ref|XP_003450515.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Oreochromis
niloticus]
Length = 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ +C+VM++ T RSRGFGFVTF D +V V+ H LD +TIDPK PR
Sbjct: 40 YFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPR 99
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVM 318
Q PK + K+F+GGL +N D++ +F ++GK+
Sbjct: 100 RAQ-PKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKLF 137
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 16/129 (12%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
+ T + + YF++YG+V V+M++ TGR RGFGFV FADP+ + V+Q HT+DGR
Sbjct: 15 WDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE-KHTIDGR 73
Query: 270 TIDPKPCNPRTLQKPKK---------------NSSFPKVFLGGLPSNVTETDLRTFFNRY 314
T++ K R Q + N K+F+GGLPS +TE R +F Y
Sbjct: 74 TVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPSTLTEEGFRQYFETY 133
Query: 315 GKVMEVVIM 323
G V +VV+M
Sbjct: 134 GHVTDVVVM 142
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG V D VVM + T R RGFGF++F + V V+ H L+G+ ++ K
Sbjct: 127 RQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+P + TE L+ +FN+YG V + VIM +T
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKT 42
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ + +VMK+ T RSRGFGF+TF DP +V V+ + H LDG+ IDPK
Sbjct: 3 RDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAF 62
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 63 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 107
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 92 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 151
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 152 PKEVMLP 158
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q +F +YGE+ID V+MK+ TG RGFGFVTFADP V+ + H +DGRT++ K
Sbjct: 18 QSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVLD-KHVIDGRTVEAKKSV 76
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR K K+F+GG+P ++T+ + +++F +G V+E IM +
Sbjct: 77 PRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHS 126
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV-GVVIQNCPHTLDGRTI 271
+ YF +G V++ +M+++ TGRSRGFGFVTF + V ++ H L G+ +
Sbjct: 107 KSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQVVEDILAHGKMHELGGKQV 161
>gi|115473043|ref|NP_001060120.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
Japonica Group]
gi|113611656|dbj|BAF22034.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|215695373|dbj|BAG90564.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFSR+GEV + V+M++ TGR+RGFGFV F D V + H +DGR ++ K
Sbjct: 23 REYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDA-GVAERVTMDKHMIDGRMVEAKKAV 81
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K N S K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 82 PRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 138
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 123 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 180 PPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP+G GA N S AGK ++ T + + YF+++GEV+DC + +
Sbjct: 46 PPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPN 105
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGG 297
TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GG
Sbjct: 106 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGG 159
Query: 298 L-PSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLR 354
L P + TE +R +F +G++ + + M P+ R G + KE V++VL
Sbjct: 160 LNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLE 213
Query: 355 RSSTT 359
+ T
Sbjct: 214 KKFHT 218
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
Query: 161 NNWNWNMPQNGPTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRY 220
+N N QNG + + G + + +G + S P+ GK ++ T ++ + Y
Sbjct: 146 DNVNAVAVQNGSGVNLSNKSSSSGRSTPSNSGGSLSDPAPGKLFVGGLSWQTSSEKLKEY 205
Query: 221 FSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRT 280
F+ +G V D ++MK+ T RSRGFGF+TF +P V V++ HTLDG+ IDPK P+
Sbjct: 206 FNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN 265
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
+P++ + K+F+GG+ + + +++ +F+++G V E V++M +T R
Sbjct: 266 --RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKR 313
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 285 TSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 344
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 345 ECKKAQPKEAVTPAAQLLQKRIMLGTL 371
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 12/123 (9%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF R+GEV + V+M++ TGR+RGFGF+ FA+P V + H +DGR +
Sbjct: 17 TDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEP-GVAERVTMDKHMIDGRMV 75
Query: 272 DPKPCNPRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 320
+ K PR Q K N S K+F+GGL SNVTE + R +F ++G + +V
Sbjct: 76 EAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDV 135
Query: 321 VIM 323
V+M
Sbjct: 136 VVM 138
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 123 RRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 183 GGATGAAPTG-----------PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCV 231
GG T AAP+G + + AGK ++ T + + YF+++GEV+DC
Sbjct: 46 GGGTTAAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCT 105
Query: 232 VMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFP 291
+ + TGRSRGFGF+ F D ++V V+ H LDGR IDPK K
Sbjct: 106 IKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVK 159
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQELPVQKEATAV 349
K+F+GGL TE +R +F ++G++ +E+ I R G + KE V
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF------KEEDPV 213
Query: 350 QQVLRRSSTT 359
++VL + T
Sbjct: 214 KKVLEKKFHT 223
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 34/162 (20%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F YG+V+ VM+ TG+ RGFGFV FADPN + V+++ H +DGRT+D K
Sbjct: 23 KEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED-KHVIDGRTVDAKKAF 81
Query: 278 PRTLQKPK-----------------KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 320
R Q+ N K+F+GGLP +TE R +F YG V +V
Sbjct: 82 SREDQQISVTSRGGNSNSGMNSENGGNIRTKKIFVGGLPPTLTEEKFRLYFESYGHVTDV 141
Query: 321 VIM------SPRTIRAGITRVPTQELPVQKEATAVQQVLRRS 356
V+M PR G T+E AV +VL +S
Sbjct: 142 VVMYDQNTGRPRGF--GFISFDTEE--------AVDRVLHKS 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF YG V D VVM + TGR RGFGF++F V V+ H L+G+ ++ K P+
Sbjct: 131 YFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGKQVEVKRALPK 190
>gi|417409403|gb|JAA51208.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 292
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 177 AGGPPAGGATGAAPTGPNPS--GPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMK 234
+ PPA T A N S AGK ++ T + YFS++GEV+DC +
Sbjct: 4 SAAPPAVNQTSAEGDQINASRTEDDAGKMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKM 63
Query: 235 NNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVF 294
+ TGRSRGFGF+ F D +V V+ H LDGR IDPK K K+F
Sbjct: 64 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKA------MAMKKEPVKKIF 117
Query: 295 LGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRTI-RAGITRV--PTQELPVQK 344
+GGL TE ++R +F +G++ + + M P++ R G + +E PV+K
Sbjct: 118 VGGLNPEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRK 171
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q +F +YGE+ID V+MK+ TG RGFGFVTFADP V+ + H +DGRT++ K
Sbjct: 18 QSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVLD-KHVIDGRTVEAKKSV 76
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
PR K K+F+GG+P ++T+ + +++F +G V+E IM +
Sbjct: 77 PRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHS 126
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV-GVVIQNCPHTLDGRTIDPKPCNP 278
YF+ +G V++ +M+++ TGRSRGFGFVTF V ++ H L G+ ++ + C
Sbjct: 109 YFASFGSVVEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKMHELGGKQVNDRDC-- 166
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNV 302
S + + GL SN+
Sbjct: 167 ---------SHLSNLIIQGLTSNL 181
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 250
TG + S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF
Sbjct: 200 TGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 259
Query: 251 DPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTF 310
DP V V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +
Sbjct: 260 DPCTVEKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAY 317
Query: 311 FNRYGKVME-VVIMSPRTIR 329
F ++G V E V++M +T R
Sbjct: 318 FAQFGPVEETVMLMDQQTKR 337
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YF+++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 309 TSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 368
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 369 ECKKAQPKESVTPAAQLLQKRIMLGSL 395
>gi|226472204|emb|CAX77138.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 67/104 (64%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++GE+ID VVMK+ + +SRGF FVT+ D ++V N PHT+DG+ +D K PR
Sbjct: 33 YYGQWGEIIDVVVMKDPRSQKSRGFVFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPR 92
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ +++ K+F+G L +VT DL +F+++G V + I+
Sbjct: 93 EETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIV 136
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G V D ++ +T SRGF FVTF D + V VI PHT+ D + R
Sbjct: 123 YFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSR 182
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV DC + ++++GRSRGFGFV F DP++V V++ H LDGR IDPK R
Sbjct: 75 YFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLEQKEHRLDGRLIDPK----R 130
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
+ K K+F+GGL TE ++R +F YG++ + + + P++ R G +
Sbjct: 131 AM--AMKKEPVKKIFVGGLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFIFITY 188
Query: 338 QE 339
+E
Sbjct: 189 KE 190
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGE+ + + + ++ + RGF F+T+ + + ++N HT++G + K
Sbjct: 157 REYFGEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKCLENKFHTIEGSRCELKLAQ 216
Query: 278 PRTL 281
P+ +
Sbjct: 217 PKEV 220
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT+ G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNC 175
Query: 272 DPKPCNPR 279
+ + P+
Sbjct: 176 EVRKALPK 183
>gi|242046120|ref|XP_002460931.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
gi|241924308|gb|EER97452.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
Length = 471
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV FAD + + H +DGR ++ K
Sbjct: 23 REYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADS-GIAERVTMDKHMIDGRMVEAKKAV 81
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K N S K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 82 PRDDQSIASKNNGSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 138
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 123 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF++YG+V++ +MK+N TGRSRGFGF+TF D +V V++ H LDG+ IDPK PR
Sbjct: 175 YFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDEVVK-TQHILDGKVIDPKRAIPR 233
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ ++V + FF +YG +++ +M
Sbjct: 234 EEQDKT-----GKIFVGGIGADVRPKEFEDFFAQYGTIIDAQLM 272
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F++YG +ID +M + +TGRSRGFGFVT+ P+ V V QN G+ I+ K
Sbjct: 257 EDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIEFKGKQIEIKRAE 316
Query: 278 PRT 280
PRT
Sbjct: 317 PRT 319
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE LR +FN+YGKV+E+ IM
Sbjct: 157 KMFIGGLNWETTEETLRDYFNKYGKVVELKIM 188
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YG++ + +VMK+ T RSRGFGF+TF DP +V V+ H LDG+ IDPK
Sbjct: 139 REYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQGTHELDGKKIDPKVAF 198
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 199 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 243
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 228 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 287
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 288 PKEVMLP 294
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT+ G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNC 175
Query: 272 DPKPCNPR 279
+ + P+
Sbjct: 176 EVRKALPK 183
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 181 PAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNET 238
P+G GA N S AGK ++ T + + YF+++GEV+DC + + T
Sbjct: 54 PSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 113
Query: 239 GRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGL 298
GRSRGFGF+ F D +V V+ H LDGR IDPK K K+F+GGL
Sbjct: 114 GRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGL 167
Query: 299 PSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVPTQELPVQKEATAVQQVLRRS 356
TE +R +F +G++ + + M P+ R G + KE V++VL +
Sbjct: 168 NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF------KEEEPVKKVLEKK 221
Query: 357 STT 359
T
Sbjct: 222 FHT 224
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F +YGE+ D V+M++ TG+ RGFGF+TFADP+ V VI++ H ++G+ ++ K P
Sbjct: 37 KHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDT-HVINGKQVEIKRTIP 95
Query: 279 RTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV-VIMSPRTIRA 330
+ K+ K+F+GG+PS VTE +L+ FF +YG V+E VI T R+
Sbjct: 96 KGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRS 149
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
+ +F++YG V++ V++++ET RSRGFGFV F V ++
Sbjct: 126 KDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELL 167
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT+ G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNC 175
Query: 272 DPKPCNPR 279
+ + P+
Sbjct: 176 EVRKALPK 183
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|242004925|ref|XP_002423326.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212506345|gb|EEB10588.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 286
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + + +F ++GEV+D VVMK+ +T RSRGFGF+T+A + V N PH +D R
Sbjct: 45 YKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITYAKAHMVDDAQANRPHKVDNR 104
Query: 270 TIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
T++PK PRT +P +S K+F+GG+ E DL+ F ++G ++ I+ +
Sbjct: 105 TVEPKRAVPRTESGRPDAGASIKKLFIGGIKDEHEEEDLKEHFKQFGNIVSCSIVVDK 162
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAVNARPHNVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ R F FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 175 PAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMK 234
A G AGG + G ++GK A+ T + ++F +YG + D V+MK
Sbjct: 69 EAVGNVDAGGED--ERDADSSGGDASGKVFVGGVAWETTEETFTKHFQKYGAITDSVIMK 126
Query: 235 NNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVF 294
+ T RGFGFVTF+DP+ + V+++ H +DGRT++ K P+ L K K+F
Sbjct: 127 DKHTRMPRGFGFVTFSDPSVLDRVLED-EHVIDGRTVEVKRTVPKELS-SKDGPKTKKIF 184
Query: 295 LGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+GG+P ++TE L+ F+ YGKV+E IM
Sbjct: 185 VGGIPPSLTEDKLKEHFSSYGKVVEHQIM 213
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + V V+ + H L G+ ++ K
Sbjct: 198 KEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKA 257
Query: 277 NPR 279
P+
Sbjct: 258 EPK 260
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAVNARPHNVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ R F FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 250
+G + S P+ GK ++ T ++ + YF+ +G V D ++MK+ T RSRGFGF+TF
Sbjct: 216 SGGSLSDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 275
Query: 251 DPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTF 310
+P V V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +
Sbjct: 276 EPCTVDKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSADEVKAY 333
Query: 311 FNRYGKVME-VVIMSPRTIR 329
F+++G V E V++M +T R
Sbjct: 334 FSQFGAVEETVMLMDQQTKR 353
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 325 TSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 384
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 385 ECKKAQPKEAVTPAAQLLQKRIMLGTL 411
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YG+VID +MK+ TGRSRGFGF+TF +P++V V++ H LDG+ IDPK
Sbjct: 174 RDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVK-TQHILDGKVIDPKRAI 232
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K+F+GG+ ++V + FF ++G +++ +M
Sbjct: 233 PREEQDKTG-----KIFVGGIGADVRPKEFEEFFAQWGTIIDAQLM 273
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G +ID +M + +TGRSRGFGFVT+ P+ V V QN G+ I+ K
Sbjct: 258 EEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAE 317
Query: 278 PRTLQKPKK 286
PR +QK ++
Sbjct: 318 PRHMQKQQQ 326
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE LR +F++YGKV+++ IM
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIM 189
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YG VID +MK+ +GRSRGFGF+TF +P++V V++ H LDG+ IDPK
Sbjct: 174 REYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEVVK-TQHILDGKVIDPKRSI 232
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K+F+GG+ ++V + FF++YG +++ +M
Sbjct: 233 PREEQDKTG-----KIFVGGIGADVRPKEFEEFFSQYGTIIDAQLM 273
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG +ID +M + +TGRSRGFGFVT+ P V V QN G+ I+ K
Sbjct: 258 EEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAVDRVCQNKYIDFKGKQIEIKRAE 317
Query: 278 PRTLQK 283
PR +QK
Sbjct: 318 PRHMQK 323
>gi|326479392|gb|EGE03402.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton equinum
CBS 127.97]
Length = 493
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 69/115 (60%), Gaps = 9/115 (7%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRT- 270
T Q + YFS++GEV +C VM++ +GRSRGFGF+TF DP V V+ H LDG+
Sbjct: 10 TTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK-EHYLDGKIL 68
Query: 271 --IDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
IDPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 69 YKIDPKRAIPRDEQERTS-----KIFVGGVSQEATEQEFKQFFMQFGRVVDATLM 118
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
S T +++Q +F ++G V+D +M + +TGR RGFGFVTF V + + P +
Sbjct: 94 SQEATEQEFKQ-FFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATL-SVPLEIH 151
Query: 268 GRTIDPKPCNPR 279
G+ I+ K PR
Sbjct: 152 GKAIEVKKAQPR 163
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+D V+M + +GR RGFGFVTFADP V++ H +DGR ++ K PR
Sbjct: 19 YFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPAVADRVLEE-DHVIDGRAVEVKRTVPR 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K + K+F+GG+P ++TE +L+ +F+ YG +++ IM
Sbjct: 78 EDMDVKGVTRTKKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIM 121
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTI 271
+ YFS YG ++D +M +++TGRSRGFGFVTF + V + + H L G+ +
Sbjct: 106 KEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGRTHELGGKQV 160
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF YGEV++ V+M++ TGR+RGFGFV F+DPN V+ + HT+DGR P+
Sbjct: 25 YFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLD-KHTIDGRVAVPRDEQHS 83
Query: 280 TLQKP---------KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
++ +S K+F+GGL SNVTE D R +F ++G + +VV+M
Sbjct: 84 VVKANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVM 136
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+TF V V+ H L + ++ K
Sbjct: 121 RKYFEQFGTITDVVVMYDHATQRPRGFGFITFDTEEAVDNVLHKTFHELKEKMVEVKRAV 180
Query: 278 PRTL 281
P+ L
Sbjct: 181 PKEL 184
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
K+F+GG+ TE L+ +F YG+V+E VIM RT
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRT 42
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 10/115 (8%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YG+V++ V+M++ TGR+RGFGF+ F++P V V+Q+ HT+DGR ++ K
Sbjct: 23 KEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQD-KHTIDGRQVELKRAV 81
Query: 278 PRTLQKPKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR + S K+F+GGL VTE D + +F ++G + +VV+M
Sbjct: 82 PREEHQRNAQKSGSNVGAGPRTKKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVM 136
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G + D VVM ++ + R RGFGF+TF V V+ H L +T++ K P+
Sbjct: 123 YFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMKNFHELHDKTVEVKRALPK 182
Query: 280 TL 281
+
Sbjct: 183 EM 184
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 175 PAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMK 234
A G AGG + G ++GK A+ T + ++F +YG + D V+MK
Sbjct: 69 EAVGNVDAGGED--ERDADSSGGDASGKVFVGGVAWETTEETFTKHFQKYGAITDSVIMK 126
Query: 235 NNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVF 294
+ T RGFGFVTF+DP+ + V+++ H +DGRT++ K P+ L K K+F
Sbjct: 127 DKHTRMPRGFGFVTFSDPSVLDRVLED-EHVIDGRTVEVKRTVPKELS-SKDGPKTKKIF 184
Query: 295 LGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+GG+P ++TE L+ F+ YGKV+E IM
Sbjct: 185 VGGIPPSLTEDKLKEHFSSYGKVVEHQIM 213
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTI 271
+ +FS YG+V++ +M ++ TGRSRGFGFVTF + V V+ + H L G+ +
Sbjct: 198 KEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQV 252
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F +YG ++D +MK++ TGRSRGFGF+TF D +V ++++ H LDG+ IDPK R
Sbjct: 181 HFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLKD-RHVLDGKLIDPK----R 235
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K + K+F+GG+ VTE + FF+++GK+++ +M
Sbjct: 236 AISK-EDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLM 278
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G++IDC +M + +TGRSRGFGFVT+ P V V N TL G+ ++ K PR
Sbjct: 265 FFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 324
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YF +YGE+ID V+MK+ TGR RGFGF+T+ DP+ V VI H ++ + ++ K P
Sbjct: 33 KYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAEY-HIINDKQVEIKRTIP 91
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + K + K+F+GG+P+ +TE + + FF+++GKV E I+
Sbjct: 92 KGSAESKDFKT-KKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEII 135
>gi|195054712|ref|XP_001994267.1| GH23661 [Drosophila grimshawi]
gi|193896137|gb|EDV95003.1| GH23661 [Drosophila grimshawi]
Length = 479
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 56 FYSQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDTAQENRPHIIDGKTVEAKRALPR 115
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G +
Sbjct: 116 PERETRETNISVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIE 175
Query: 337 TQELPVQKEATAVQQVLRRSSTTK 360
+ +A +L+R + K
Sbjct: 176 FDDYDAVDKA-----ILQRQHSIK 194
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE L+ F++++GKV++VV+M
Sbjct: 38 KLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVM 69
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 49 YLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRAKAI 108
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVP- 336
++P K KVF+GGL ++TE LR +F YG++ +E+ + R G V
Sbjct: 109 KGKEPPK-----KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTF 163
Query: 337 TQELPVQK 344
E PVQK
Sbjct: 164 ALEEPVQK 171
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGE+ + + +T RGF FVTFA V +++N H + + K
Sbjct: 132 REYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIKVAQ 191
Query: 278 PRTLQKPKKN 287
P+ + + ++N
Sbjct: 192 PKEVYRQQQN 201
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 250
TG + S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF
Sbjct: 195 TGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 254
Query: 251 DPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTF 310
+P V V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +
Sbjct: 255 EPCTVQKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAY 312
Query: 311 FNRYGKVME-VVIMSPRTIR 329
F+++G V E V++M +T R
Sbjct: 313 FSQFGPVEETVMLMDQQTKR 332
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 304 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 363
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 364 ECKKAQPKEAVTPAAQLLQKRIMLGTL 390
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 176 AAGGPPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVM 233
AA AG GA N S AGK ++ T + + YF+++GEV DC +
Sbjct: 85 AATAEAAGSQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIK 144
Query: 234 KNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKV 293
+ TGRSRGFGF+ F + +V V++ H LDGR IDPK K K+
Sbjct: 145 MDPNTGRSRGFGFILFKEAASVDKVLEQKEHKLDGRVIDPKKAMAM------KKDPVKKI 198
Query: 294 FLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQELPVQK 344
F+GGL E +R +F +G++ + + M P+T R G + +E PV+K
Sbjct: 199 FVGGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 252
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGFV FADP V+ H +DGR ++ K
Sbjct: 23 REYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME-KHLIDGRNVEAKKAV 81
Query: 278 PRTLQKPKKNSSF------------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q +S K+F+GGL S VTE+D + +F+++G + +VV+M
Sbjct: 82 PREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVM 139
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ V V+ H L+G+ ++ K
Sbjct: 124 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVKRAV 183
Query: 278 PRTL 281
P+ L
Sbjct: 184 PKEL 187
>gi|291393060|ref|XP_002713026.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G ++DCVVM++ T RSR FGFVT+A V V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEVDVAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQYGKIEVIQIMTDR 140
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ + YF +YG++ +M + +G+ +GF VTF D +++ ++ HT++G
Sbjct: 116 TEERHLRDYFEQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRAG----ITRVP 336
+ PK+ K+F+GGL T+ LR+ F ++G +M+ V+M P T R+ +T
Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYAT 64
Query: 337 TQELPV 342
+E+ V
Sbjct: 65 VEEVDV 70
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YF +YGE+ID V+MK+ TGR RGFGF+T+ DP+ V VI H ++ + ++ K P
Sbjct: 33 KYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAEN-HIINDKQVEIKRTIP 91
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + K + K+F+GG+P+ +TE + + FF+++GKV E I+
Sbjct: 92 KGSAESKDFKT-KKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEII 135
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +FS++G+V + +++++ + RSRGFGF+ F + V ++ T + G ++ K
Sbjct: 120 KNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRTDMMGTQVEIKKA 179
Query: 277 NPR 279
P+
Sbjct: 180 EPK 182
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G +IDCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDR 140
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
+ PK++ K+F+GGL T+ LR+ F ++G +++ V+M P T R+
Sbjct: 5 ESPKESEQLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRS 54
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F +YG ++D +MK++ TGRSRGFGF+TF D +V ++++ H LDG+ IDPK R
Sbjct: 181 HFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLKD-RHVLDGKLIDPK----R 235
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K + K+F+GG+ VTE + FF+++GK+++ +M
Sbjct: 236 AISK-EDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLM 278
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G++IDC +M + +TGRSRGFGFVT+ P V V N TL G+ ++ K PR
Sbjct: 265 FFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 324
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 183 GGATGAAPTG-----------PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCV 231
GG T AAP+G + + AGK ++ T + + YF+++GEV+DC
Sbjct: 46 GGGTTAAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCT 105
Query: 232 VMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFP 291
+ + TGRSRGFGF+ F D ++V V+ H LDGR IDPK K
Sbjct: 106 IKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVK 159
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQELPVQKEATAV 349
K+F+GGL TE +R +F ++G++ +E+ I R G + KE V
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF------KEEDPV 213
Query: 350 QQVLRRSSTT 359
++VL + T
Sbjct: 214 KKVLEKKFHT 223
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 144 GYGSYGPTSGAPQSGYGNNWNWNMPQNGPTTPAAGGPPAGGATGAAPTGPNPSGPSAGKP 203
G G Y +G Q+G N AG A G A G AGK
Sbjct: 24 GAGQYDQGNGDAQAG--------AQGNAGADGTAGDDGADGGQIDASKGE----EDAGKM 71
Query: 204 PADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCP 263
++ T + + YFS++GEV DC + + TGRSRGFGF+ F +P+ V V+
Sbjct: 72 FVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQKE 131
Query: 264 HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI- 322
H LDGR IDPK K K+F+GGL TE +R +F +G++ + +
Sbjct: 132 HRLDGRQIDPKKAMAM------KKEPVKKIFVGGLNPETTEERIREYFGAFGEIETIELP 185
Query: 323 MSPRT-IRAGITRVPTQELPVQKEATAVQQVLRRS 356
M P++ R G + KE AV+++L +
Sbjct: 186 MDPKSNKRRGFVFITF------KEEEAVKKILEKK 214
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 175 PAAGGPPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVV 232
AA GG GA N S AGK ++ T + + YFS++GEV DC +
Sbjct: 24 EAAESKVPGGQNGAEGDQINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTI 83
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPK 292
+ TGRSRGFGF+ F D +V V++ H LDGR IDPK K K
Sbjct: 84 KMDPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAM------KKDPIKK 137
Query: 293 VFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQELPVQK 344
+F+GGL E +R +F +G++ + + M P+T R G + +E PV+K
Sbjct: 138 IFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 192
>gi|353232013|emb|CCD79368.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ Y+ ++GE+ID VVMK+ + +SRGFGFVT+ D ++V N PHT+DG+ +D K
Sbjct: 31 KNYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYKDSSSVDAAQNNRPHTVDGKEVDTKRAM 90
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI---RAGITR 334
PR P+ +++ K+F+G L +VT DL V +V++ P TI +A + +
Sbjct: 91 PREETSPEVHAAVKKIFVGALKKDVTNEDLNA-------VDKVILARPHTIKDSKADVRK 143
Query: 335 VPTQE 339
++E
Sbjct: 144 ALSRE 148
>gi|169865640|ref|XP_001839418.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coprinopsis cinerea
okayama7#130]
gi|116499426|gb|EAU82321.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coprinopsis cinerea
okayama7#130]
Length = 495
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 181 PAGGATGAAPTGPNPSGPSAGKPPADYSAYG----TYAQYQQRYFSRYGEVIDCVVMKNN 236
P GA P+G PS K G T + + YFS++G+V C +M++
Sbjct: 112 PDSGALNKIPSGERTVRPSEMKDEGKMFIGGLNWDTTDEGLRDYFSQFGKVDACTIMRD- 170
Query: 237 ETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLG 296
GRSR F F+TF DP +V V+ H LDG+ IDPK PR +++ K+F+G
Sbjct: 171 AAGRSRCFAFLTFEDPASVNAVMVR-EHILDGKIIDPKRAIPR-----QEHQRATKLFIG 224
Query: 297 GLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
GLP +VT +R FF+++GKV++ +M R
Sbjct: 225 GLPGSVTSESMREFFSQFGKVIDSTVMLDR 254
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 214 AQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
++ + +FS++G+VID VM + ETGRS+GFGF++F D +V + +DG+ ID
Sbjct: 232 SESMREFFSQFGKVIDSTVMLDRETGRSKGFGFISFED-TDVRPFLGFGNLEIDGKLIDV 290
Query: 274 KPCNPR 279
K PR
Sbjct: 291 KLAQPR 296
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 267 DGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
D ++ P RT+ +P + K+F+GGL + T+ LR +F+++GKV IM
Sbjct: 113 DSGALNKIPSGERTV-RPSEMKDEGKMFIGGLNWDTTDEGLRDYFSQFGKVDACTIMRDA 171
Query: 327 TIRAGITRVPTQELPVQKEATAVQQVL 353
R+ T E P A V++ +
Sbjct: 172 AGRSRCFAFLTFEDPASVNAVMVREHI 198
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 24/154 (15%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GEV++ V+MK+ TGR+RGFGF+ FADP V+ H +DG+ ++ K
Sbjct: 22 REYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERVVL-IRHVIDGKIVEAKKAV 80
Query: 278 PRTLQKPKKNSS-----------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SP 325
PR SS K+F+GGL S+VTE + + +F ++G + +VV+M
Sbjct: 81 PRDDHVVLNRSSSSLQGSPGPATSKKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDH 140
Query: 326 RTIR---AGITRVPTQELPVQKEATAVQQVLRRS 356
RT R G ++E AV +VL+R+
Sbjct: 141 RTQRPRGFGFISFESEE--------AVDRVLQRT 166
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+++ +YF+++G + D VVM ++ T R RGFGF++F V V+Q H L+G+ +
Sbjct: 117 TEAEFK-KYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQRTFHELNGKMV 175
Query: 272 DPKPCNPRTL 281
+ K P+ +
Sbjct: 176 EVKLAVPKEM 185
>gi|324514790|gb|ADY45988.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 319
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 211 GTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRT 270
G Q Q ++S++GE+IDC+VMK+ T RSRGFGFV++ + V + N PH +DG+T
Sbjct: 6 GVQQQQQDEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIVDGKT 65
Query: 271 IDPKPCNPRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+DPK PR Q+ + N S ++++ G+ TE L +F ++G V++ I++ +
Sbjct: 66 VDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDK 122
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + YF ++G VI ++ + TG+ RGF F+TF D + V + H + D K
Sbjct: 101 QMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVK 160
Query: 275 P 275
Sbjct: 161 K 161
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 10/132 (7%)
Query: 195 PSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNN 254
P G S+GK A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+
Sbjct: 169 PGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSV 228
Query: 255 VGVVIQNCPHTLDGRTIDPKPCNPRTLQ---KPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
+ V+++ H +DGRT+ + ++ +P+ K+F+GGLPS++TE +LR F
Sbjct: 229 IDKVLED-EHVIDGRTLKGQSQGSNVIKDGPRPR------KIFVGGLPSSLTEDELREHF 281
Query: 312 NRYGKVMEVVIM 323
+ YGK++E IM
Sbjct: 282 SPYGKIVEHQIM 293
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPC 276
+ +FS YG++++ +M ++ TGRSRGFGFVTF ++V VI + L G+ ++ K
Sbjct: 278 REHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKA 337
Query: 277 NPR 279
P+
Sbjct: 338 EPK 340
>gi|224102217|ref|XP_002312594.1| predicted protein [Populus trichocarpa]
gi|222852414|gb|EEE89961.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF++YG+V+ VVMK+ TGR RGFGFV FADP+ + V+Q+ HT+DGRT+ + N R
Sbjct: 25 YFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVLDRVLQDT-HTIDGRTVKEQQTNAR 83
Query: 280 T-LQKPKKNSS------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P +N+S K+F+GGLP +T+ R +F +G V +VVIM
Sbjct: 84 AGNLNPARNTSSGGNIRTKKIFVGGLPPTLTDDGFRQYFEAFGLVTDVVIM 134
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D V+M + T R RGFGF++F + V V+Q H L+G+ ++ K
Sbjct: 119 RQYFEAFGLVTDVVIMYDQSTQRPRGFGFISFDSEDAVDRVLQRTFHDLNGKQVEVKRAL 178
Query: 278 PR 279
P+
Sbjct: 179 PK 180
>gi|195392302|ref|XP_002054798.1| GJ22593 [Drosophila virilis]
gi|194152884|gb|EDW68318.1| GJ22593 [Drosophila virilis]
Length = 474
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 54 FYSQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDTAQENRPHIIDGKTVEAKRALPR 113
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G +
Sbjct: 114 PERETRETNISVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIE 173
Query: 337 TQELPVQKEATAVQQVLRRSSTTK 360
+ +A +L+R + K
Sbjct: 174 FDDYDAVDKA-----ILQRQHSIK 192
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE L+ F++++GKV++VV+M
Sbjct: 36 KLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVM 67
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 26 YRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGR 85
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DLR +F YG + + I++ +
Sbjct: 86 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDK 143
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
++YF YG + ++ + ETG+ RGFGFV F D + V + H + G+ +D K
Sbjct: 125 RQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A+ T + ++F +YG + D V+MK+ T RGFGFVTF+DP+ + V+++ H +DG
Sbjct: 45 AWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED-DHVIDG 103
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RT++ K PR K K+F+GGLP ++TE +L+ F+ YG V+E IM
Sbjct: 104 RTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIM 158
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTIDPKPCNP 278
+FS YG V++ +M ++ TGRSRGFGF+TF ++V VI + L G+ ++ K P
Sbjct: 145 HFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 204
Query: 279 R 279
+
Sbjct: 205 K 205
>gi|226483449|emb|CAX74025.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
+P G GK T + YFS++G++ + VM +N TGRSRGFG+V F +
Sbjct: 4 DPQGNEVGKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDE 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNR 313
+V V++ H +D + +DPK CN + KN KVF+GG+ + E +R FF+
Sbjct: 64 SVDWVLRQKTHLIDLKEVDPKRCN---VNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSS 120
Query: 314 YGKVMEVVIMSPRTI--RAGITRVPTQELPVQKEATAVQQVLRRSSTTKVQAPFGATTLS 371
YG+V +V +++ +T G V ++ V + + + +++A +
Sbjct: 121 YGRVTDVNLLAGQTKPRHRGFAFVGFEDEEVVRNLIKLHYLNLNGKQVEIKA------MK 174
Query: 372 PPN 374
PPN
Sbjct: 175 PPN 177
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A+ + +FS YG V D ++ R RGF FV F D V +I+ L+G
Sbjct: 106 AFDHDENIIRNFFSSYGRVTDVNLLAGQTKPRHRGFAFVGFEDEEVVRNLIKLHYLNLNG 165
Query: 269 RTIDPKPCNPRTLQK 283
+ ++ K P QK
Sbjct: 166 KQVEIKAMKPPNTQK 180
>gi|218199915|gb|EEC82342.1| hypothetical protein OsI_26646 [Oryza sativa Indica Group]
Length = 472
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGFV F D V + H +DGR ++ K
Sbjct: 23 REYFGRFGEVTEAVIMRDRNTGRARGFGFVVFTDA-GVAERVTMDKHMIDGRMVEAKKAV 81
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K N S K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 82 PRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVM 138
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 123 RRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
>gi|291393062|ref|XP_002713027.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G ++DCVVM++ T RSR FGFVT+A V V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEVDVAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQYGKIEVIQIMTDR 140
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ + YF +YG++ +M + +G+ +GF VTF D +++ ++ HT++G
Sbjct: 116 TEERHLRDYFEQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + + +F ++GE++D VVMK+ +T RSRGFGF+T++ + V N PHT+D R
Sbjct: 27 YRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDDAQNNRPHTIDSR 86
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++ K R ++ P+ ++ K+F+GG+ + TE LR +F+ YG V V I++ +
Sbjct: 87 VVETKRAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDK 144
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YG V + ++ + TG+ RGFGFV F D + V V N PH ++G+ +D K
Sbjct: 126 REYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLNAPHKINGKQLDVKKAL 185
Query: 278 PR 279
P+
Sbjct: 186 PK 187
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 26 YRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGR 85
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DLR +F YG + + I++ +
Sbjct: 86 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDK 143
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
++YF YG + ++ + ETG+ RGFGFV F D + V + H + G+ +D K
Sbjct: 125 RQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +YGE+ID V+MK+ T + RGFGF+TF+DP V VI++ H +DG+ ++ K
Sbjct: 31 KEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVIEDN-HVIDGKQVEIKRTI 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P+ P K+ K+F+GGL S + + + + FF+++GKV+E I+ +
Sbjct: 90 PKGAA-PLKDFKTKKIFVGGLVSTLKDDEFKDFFSKFGKVVEHEIIRDHS 138
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPH--TLDGRTIDPKP 275
+ +FS++G+V++ +++++ T +SRGFGF+ F V ++ + LDG ++ K
Sbjct: 119 KDFFSKFGKVVEHEIIRDHSTNKSRGFGFIVFDAEKTVDELLAKKGNMIDLDGTQVEIKK 178
Query: 276 CNPR 279
P+
Sbjct: 179 AEPK 182
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F +YG++ID V+MK+ T + RGFGF+TFADP V VI++ H ++G+ ++ K
Sbjct: 31 KEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRVIED-EHVINGKPVEIKRTI 89
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
P+ P K+ K+F+GGLPS + E + + FF+++GKV+E I+
Sbjct: 90 PKGAA-PLKDFKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEII 134
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD--GRTIDPKP 275
+ +FS++G+V++ +++++ T RSRGFGF+ F V ++ + +D G ++ K
Sbjct: 119 KEFFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLHKKGNMIDLNGSQVEIKK 178
Query: 276 CNPR 279
P+
Sbjct: 179 AEPK 182
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 17 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 76
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 77 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 135
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 111 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 170
Query: 272 DPK 274
+ +
Sbjct: 171 EVR 173
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 23 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 82
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 83 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 141
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 117 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 176
Query: 272 DPKP 275
+ +
Sbjct: 177 EVRK 180
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q+YF YG V+DCV+M++ TG RGFGFVTF + H LDGR ++ K
Sbjct: 67 QKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATK-RHELDGRQVEAKKAV 125
Query: 278 PRTLQKPKKNSSFP--KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAGITR 334
P+ + + P K+F+GGLP + TE D +F R G V+E IM + GI+R
Sbjct: 126 PKAEYITRSQVTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDH--QTGISR 182
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF R G V++ +M +++TG SRGFGFVTF+ + V V + H + G+ ++ K P+
Sbjct: 160 YFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFEQSQHEIKGKIVEVKKAEPK 219
Query: 280 TLQKPKK 286
+ ++
Sbjct: 220 HFSEGRR 226
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 18/133 (13%)
Query: 262 CPHTLDGRTIDPKPCNPRT----------LQKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
PH+L T K +T P ++ K+F+GGL TE L+ +F
Sbjct: 11 SPHSLSDSTESNKQSKEKTSIESNAVRAEHSDPGNQNNNSKIFVGGLSWETTEETLQKYF 70
Query: 312 NRYGKVMEVVIMSPRTIRAGITR-----VPTQELPVQKEATAVQQVLRRSSTTKVQAPFG 366
YG+V++ VIM R G R +E + AT ++ R K P
Sbjct: 71 ESYGRVLDCVIM--RDKHTGHPRGFGFVTFEKEESADRAATKRHELDGRQVEAKKAVP-K 127
Query: 367 ATTLSPPNLTTPT 379
A ++ +T PT
Sbjct: 128 AEYITRSQVTKPT 140
>gi|302654951|ref|XP_003019271.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
gi|291182985|gb|EFE38626.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
Length = 496
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 13/119 (10%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRT- 270
T Q + YFS++GEV +C VM++ +GRSRGFGF+TF DP V V+ H LD R+
Sbjct: 10 TTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK-EHYLDARSF 68
Query: 271 ------IDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
IDPK PR Q+ K+F+GG+ TE + + FF ++G+V++ +M
Sbjct: 69 ADQLYKIDPKRAIPRDEQERTS-----KIFVGGVSQEATEQEFKQFFMQFGRVVDATLM 122
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 208 SAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
S T +++Q +F ++G V+D +M + +TGR RGFGFVTF V + + P +
Sbjct: 98 SQEATEQEFKQ-FFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATL-SVPLEIH 155
Query: 268 GRTIDPKPCNPR 279
G+ I+ K PR
Sbjct: 156 GKAIEVKKAQPR 167
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 29/159 (18%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV+ VVM++ T R RGFGFV F+DP+ + V+Q+ HT+DG+T++ K
Sbjct: 23 KDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD-KHTIDGKTVEAKRAL 81
Query: 278 PRTLQKPKKNSSF----------------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVV 321
R Q+ +S K+F+GGLP +TE + +F YG V +VV
Sbjct: 82 SREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVV 141
Query: 322 IMSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+M + R G T+E AV +VL ++
Sbjct: 142 VMYDQNTRRPRGFGFISFDTEE--------AVDRVLHKT 172
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YG V D VVM + T R RGFGF++F V V+ H L+G+ ++ K
Sbjct: 128 KEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 187
Query: 278 PR 279
P+
Sbjct: 188 PK 189
>gi|395862544|ref|XP_003803504.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Otolemur garnettii]
Length = 172
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 170 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 229
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 230 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 287
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 288 PVEETVMLMDQQTKR 302
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 274 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 333
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 334 ECKKAQPKEAVTPAAQLLQKRIMLGTL 360
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 181 PAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNET 238
P+G GA N S AGK ++ T + + YF+++GEV+DC + + T
Sbjct: 53 PSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 112
Query: 239 GRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGL 298
GRSRGFGF+ F D ++V V+ H LDGR IDPK K K+F+GGL
Sbjct: 113 GRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGL 166
Query: 299 PSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVP-TQELPVQK 344
TE +R +F ++G++ +E+ I R G + +E PV+K
Sbjct: 167 NPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|297681162|ref|XP_002818335.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 321
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G ++DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAISR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKKDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V + HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHVC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|108744009|gb|ABG02277.1| heterogeneous nuclear ribonucleoprotein A/B [Haplochromis burtoni]
Length = 316
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 177 AGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNN 236
AG T + AGK ++ T + + YFS++GEV DC + ++
Sbjct: 32 AGDEEQDNNTDGGKIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDS 91
Query: 237 ETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLG 296
TGRSRGFGFV F D +V V++ H LDGR IDPK R + K K+F+G
Sbjct: 92 NTGRSRGFGFVLFKDSASVDKVLEQKEHRLDGRNIDPK----RAM--AMKKDPVKKIFVG 145
Query: 297 GLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPTQELPVQKEATAVQQVLR 354
GL TE +R +F +G++ + + + P++ R G + KE T+V++ L
Sbjct: 146 GLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITY------KEETSVKKCLE 199
Query: 355 RS 356
+
Sbjct: 200 KK 201
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 170 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 229
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 230 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 287
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 288 PVEETVMLMDQQTKR 302
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 274 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 333
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 334 ECKKAQPKEAVTPAAQLLQKRIMLGTL 360
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 19 YRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGR 78
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DLR +F YG + + I++ +
Sbjct: 79 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDK 136
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG + ++ + ETG+ RGFGFV F D + V + H + G+ +D K
Sbjct: 118 RQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKAL 177
Query: 278 PRT 280
R
Sbjct: 178 SRA 180
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 15/158 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PHT+DGR ++PK R
Sbjct: 36 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAR 95
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT--IRAGITRV- 335
KP + + K+F+GG+ + E LR +F YGK+ + I++ R + G V
Sbjct: 96 EESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVT 155
Query: 336 -----PTQELPVQKEAT------AVQQVLRRSSTTKVQ 362
P ++ +QK T V++ L R +VQ
Sbjct: 156 FDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQ 193
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 119 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 178
Query: 272 DPKPCNPRTLQKPKKNS 288
+ + R + +NS
Sbjct: 179 EVRKALSRQEMQEVQNS 195
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
++ F K+F+GGL TE LR+++ ++GK+ + V+M
Sbjct: 11 REKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVM 49
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 142 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 201
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 202 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 259
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 260 PVEETVMLMDQQTKR 274
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 246 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 305
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 306 ECKKAQPKEAVTPAAQLLQKRIMLGTL 332
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV+D +M+++ TG+SRGFGF+TF D +V VIQ H LDG+ IDPK R
Sbjct: 18 YFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQG-DHVLDGKLIDPKRAIAR 76
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E + FF+++G +++ +M
Sbjct: 77 EEQ-----DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 115
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + +TGRSRGFGF+TF P V V N TL G++++ K PR
Sbjct: 102 FFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAEPR 161
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ R F FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 26 YRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGR 85
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DLR +F YG + + I++ +
Sbjct: 86 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDK 143
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG + ++ + ETG+ RGFGFV F D + V + H + G+ +D K
Sbjct: 125 RQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKAL 184
Query: 278 PR 279
R
Sbjct: 185 SR 186
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ + +VMK+ T RSRGFGF+TF DP +V V+ + H LDG+ IDPK
Sbjct: 3 RDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAF 62
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR PK + K+F+GGL + T D++++F ++G + + ++M
Sbjct: 63 PRRAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLM 107
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G + D ++M + +T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 92 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 151
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 152 PKEVMLP 158
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D +++ ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|226483447|emb|CAX74024.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
+P G GK T + YFS++G++ + VM +N TGRSRGFG+V F +
Sbjct: 4 DPQGNEVGKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDE 63
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNR 313
+V V++ H +D + +DPK CN + KN KVF+GG+ + E +R FF+
Sbjct: 64 SVDWVLRQKTHLIDLKEVDPKRCN---VNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSS 120
Query: 314 YGKVMEVVIMSPRT 327
YG+V +V +++ +T
Sbjct: 121 YGRVTDVNLLAGQT 134
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A+ + +FS YG V D ++ R RGF FV F D V +I+ L+G
Sbjct: 106 AFDHDENIIRNFFSSYGRVTDVNLLAGQTKPRHRGFAFVGFDDEEVVRNLIKLHYLNLNG 165
Query: 269 RTIDPKPCNPRTLQK 283
+ ++ K P QK
Sbjct: 166 KQVEIKAMKPPNTQK 180
>gi|413925207|gb|AFW65139.1| hypothetical protein ZEAMMB73_790427, partial [Zea mays]
Length = 221
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 194 NPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
NP G P D + T+ R+F +YGE++D V+MK+ T + RGFGF+T++DP
Sbjct: 23 NPGKIFVGGLPRD-TTDATFV----RHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPA 77
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFN 312
V VI++ H ++G+ ++ K P+ ++Q K+ K+F+GGLPS +TE + ++FF
Sbjct: 78 VVDKVIED-NHVINGKQVEIKRTIPKGSVQSSSKDFKTKKIFVGGLPSTLTEDEFKSFFA 136
Query: 313 RYGKVMEVVIM 323
RYG V++ IM
Sbjct: 137 RYGTVVDHQIM 147
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQN 261
+ +F+RYG V+D +M ++ET RSRGFGF+ FA V ++ N
Sbjct: 132 KSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLAN 175
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|189441636|gb|AAI67421.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 175 PAAGGPPAGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVV 232
AA GG GA N S AGK ++ T + + YFS++GEV DC +
Sbjct: 24 EAAESKVPGGQNGAEGDQINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTI 83
Query: 233 MKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPK 292
+ TGRSRGFGF+ F D +V V++ H LDGR IDPK K K
Sbjct: 84 KMDPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAM------KKDPIKK 137
Query: 293 VFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQELPVQKEATAV 349
+F+GGL E +R +F +G++ + + M P+T R G + +E PV+K
Sbjct: 138 IFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEIS 197
Query: 350 QQVLRRSSTTKVQAPFGATTL 370
+L+ T + P +T
Sbjct: 198 MDLLQLYRLTHPREPVSLSTF 218
>gi|119621693|gb|EAX01288.1| hCG2020860, isoform CRA_a [Homo sapiens]
Length = 214
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRT- 270
T Q + YF+++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+
Sbjct: 132 TTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKIL 190
Query: 271 ----IDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
IDPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +M +
Sbjct: 191 ILLQIDPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF + V I N P + G+ I
Sbjct: 221 TTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI-NVPLEIHGKPI 279
Query: 272 DPKPCNPR-TLQKPKKNSSFPKVFLGGLPSN 301
+ K PR L++ ++ S K G SN
Sbjct: 280 EVKKAQPRGNLREEEEASRRGKFRKDGDQSN 310
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 89 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 148
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 149 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 202
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 203 KEEEPVKK 210
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 171 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 230
Query: 278 PRTL 281
P+ +
Sbjct: 231 PKEV 234
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
Q++F YG ++D V+MKN +T + RGFGF+T++DP V V+++ H ++G+ ++ K
Sbjct: 40 QKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSDPAVVDKVMEDT-HVINGKQVEIKRTI 98
Query: 278 PRTLQKPK-KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
P+ K K+ K+F+GGLP +TE D + FF +YG V+E IM R
Sbjct: 99 PKDYMKSNPKDFRTKKIFVGGLPPILTEDDFKDFFEKYGAVVEHQIMRDHQTR 151
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHT-LDGRTIDPKPC 276
+ +F +YG V++ +M++++T RSRGFGFV F V ++ N L G ++ K
Sbjct: 130 KDFFEKYGAVVEHQIMRDHQTRRSRGFGFVVFESEEVVDDLLANGNMIDLAGSKVEIKKA 189
Query: 277 NPRTLQKPKKNSSFP 291
+PKK+S+ P
Sbjct: 190 ------EPKKSSNLP 198
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 21 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 80
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 81 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 139
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 115 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 174
Query: 272 DPKP 275
+ +
Sbjct: 175 EVRK 178
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 250
+G + S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF
Sbjct: 126 SGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 185
Query: 251 DPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTF 310
+P V V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +
Sbjct: 186 EPCTVEKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAY 243
Query: 311 FNRYGKVME-VVIMSPRTIR 329
F+++G V E V++M +T R
Sbjct: 244 FSQFGPVEETVMLMDQQTKR 263
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 235 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 294
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 295 ECKKAQPKEAVTPAAQLLQKRIMLGTL 321
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YF +YGE+ID V+MK+ TGR RGFGF+T++DP V VI H ++ + ++ K P
Sbjct: 33 KYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAET-HIINDKQVEIKRTIP 91
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + K + K+F+GG+P+++ E + + FF++YGKV++ I+
Sbjct: 92 KGSAESKDFKT-KKIFVGGIPTSMNEDEFKGFFSKYGKVVDCEII 135
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQ--NCPHTLDGRTIDPKPCN 277
+FS+YG+V+DC +++++ + RSRGFGF+ F + V V+ N L G ++ K
Sbjct: 122 FFSKYGKVVDCEIIRDHVSKRSRGFGFIVFDNELVVDNVLSEGNMIDML-GTQVEIKKAE 180
Query: 278 PR 279
P+
Sbjct: 181 PK 182
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V + HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 169 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 228
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 229 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 286
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 287 PVEETVMLMDQQTKR 301
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 273 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 332
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 333 ECKKAQPKEAVTPAAQLLQKRIMLGTL 359
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 180 PPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETG 239
P A G T + AGK ++ T + + YF+++GEV DC + + TG
Sbjct: 43 PGADGGTDGGQIDASKDEEDAGKMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTG 102
Query: 240 RSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLP 299
RSRGFGF+ F DP +V V++ H LDGR IDPK R L K KVF+GGL
Sbjct: 103 RSRGFGFILFKDPASVEKVLEQKEHKLDGRVIDPK----RAL--AMKKEPVKKVFVGGLN 156
Query: 300 SNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPTQELPVQKEA 346
+ ++ + +F +G++ + + P+T R G + +E K+A
Sbjct: 157 PDTSKEVIHEYFEAFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKA 205
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV+D +M+++ TG+SRGFGF+TF D +V VIQ H LDG+ IDPK R
Sbjct: 18 YFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQG-DHVLDGKLIDPKRAIAR 76
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ V E + FF+++G +++ +M
Sbjct: 77 EEQ-----DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 115
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G +ID +M + +TGRSRGFGF+TF P V V N TL G++++ K PR
Sbjct: 102 FFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAEPR 161
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 182 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 241
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 242 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 299
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 300 PVEETVMLMDQQTKR 314
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 286 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 345
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 346 ECKKAQPKEAVTPAAQLLQKRIMLGTL 372
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|392339470|ref|XP_003753820.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Rattus norvegicus]
Length = 341
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDVAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEATA------VQQVLRRSSTTKVQ 362
+ G V P ++ +QK T V++ L R +VQ
Sbjct: 137 SGXKRGFGFVTFDDHDPVDKIVLQKYHTKNGHNAEVRKALSRQEMQEVQ 185
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G RGFGFVTF D + V ++ HT +G
Sbjct: 111 TEEHHLRDYFEEYGKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKIVLQKYHTKNGHNA 170
Query: 272 DPKPCNPRTLQKPKKNS 288
+ + R + +NS
Sbjct: 171 EVRKALSRQEMQEVQNS 187
>gi|195109789|ref|XP_001999464.1| GI24524 [Drosophila mojavensis]
gi|193916058|gb|EDW14925.1| GI24524 [Drosophila mojavensis]
Length = 462
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++S++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 56 FYSQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDTAQENRPHIIDGKTVEAKRALPR 115
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G +
Sbjct: 116 PERETRETNISVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIE 175
Query: 337 TQELPVQKEATAVQQVLRRSSTTK 360
+ +A +L+R + K
Sbjct: 176 FDDYDAVDKA-----ILQRQHSIK 194
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE L+ F++++GKV++VV+M
Sbjct: 38 KLFIGGLAPYTTEESLKVFYSQWGKVVDVVVM 69
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + ++G+ RGF FVTF D +++ ++ HT+ G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHTVKGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV DC + + TGRSRGFGF+ F +P +V V++ H LDGR IDPK
Sbjct: 109 YFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLIDPKKAMAM 168
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 169 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITF 222
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 223 KEEDPVKK 230
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + + V V++ H + G + K
Sbjct: 191 REYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQ 250
Query: 278 PRTL 281
P+ +
Sbjct: 251 PKEV 254
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 28 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 87
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 88 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 146
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 122 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 181
Query: 272 DPKPC 276
+ +
Sbjct: 182 EVRKA 186
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF++YG V D +MK++ TGRSRGFGF+TF P++V V++ H LDG+ IDPK PR
Sbjct: 113 YFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVK-TQHILDGKVIDPKRSIPR 171
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ ++V + FF++YG +++ +M
Sbjct: 172 EEQDKTG-----KIFVGGIGADVRPKEFEEFFSQYGNIIDAQLM 210
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS+YG +ID +M + +TGRSRGFGFVT+ P+ V V Q+ G+ I+ K
Sbjct: 195 EEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAQ 254
Query: 278 PRTLQK 283
PR LQK
Sbjct: 255 PRHLQK 260
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|242069255|ref|XP_002449904.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
gi|241935747|gb|EES08892.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
Length = 450
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 18/129 (13%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + +YF +YGEV + +VM++ TGRSRGFGF+ FADP VI H +DG
Sbjct: 14 SWDTNEDHLLKYFKKYGEVEEAIVMRDRATGRSRGFGFIMFADPAVAKHVIME-KHMIDG 72
Query: 269 RTIDPKPCNPRT--------------LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRY 314
R ++ K R LQ+PK K+F+GGL SNVT+ D+ F ++
Sbjct: 73 RMVEAKKAIARDDHHSLNNIHGSAHGLQRPKHR---KKIFVGGLASNVTKEDVIKHFKQF 129
Query: 315 GKVMEVVIM 323
G +++VV++
Sbjct: 130 GTIIDVVVV 138
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F ++G +ID VV+ ++ T R RGFGF+T+ + V + L G+ ++ K
Sbjct: 124 KHFKQFGTIIDVVVVYDHHTQRPRGFGFITYDSEDAVHRALIKTFQKLKGKMVEVK---- 179
Query: 279 RTLQKP 284
R ++K
Sbjct: 180 RAIRKE 185
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 75 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 134
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 135 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 193
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 169 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 228
Query: 272 DPKPC 276
+ +
Sbjct: 229 EVRKA 233
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 37 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 96
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 97 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 155
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 131 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 190
Query: 272 DPKPC 276
+ +
Sbjct: 191 EVRKA 195
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 258 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 315
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 316 PVEETVMLMDQQTKR 330
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 302 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 361
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 362 ECKKAQPKEAVTPAAQLLQKRIMLGTL 388
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F +YG ++D +MK++ TGRSRGFGF+TF D +V ++++ H LDG+ IDPK R
Sbjct: 205 HFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLKD-RHVLDGKLIDPK----R 259
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K + K+F+GG+ VTE + FF+++GK+++ +M
Sbjct: 260 AISK-EDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLM 302
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS++G++IDC +M + +TGRSRGFGFVT+ P V V N TL G+ ++ K PR
Sbjct: 289 FFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 348
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 258 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 315
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 316 PVEETVMLMDQQTKR 330
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 302 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 361
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 362 ECKKAQPKEAVTPAAQLLQKRIMLGTL 388
>gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 13/143 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V DC + ++++GRSRGFGFV F DP++V V+Q H LDGR IDPK R
Sbjct: 75 YFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLQQKEHRLDGRLIDPK----R 130
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
+ K K+F+GGL TE +R +F +G++ + + + P++ R G +
Sbjct: 131 AM--AMKKEPVKKIFVGGLNPEATEETIREYFGAFGEIENIDLPLDPKSKKRRGFIFITY 188
Query: 338 QELPVQKEATAVQQVLRRSSTTK 360
+E EA+A + + ++ T +
Sbjct: 189 KE-----EASAKKCLEKKFHTVE 206
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T ++ + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 194 SDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 253
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 254 DKVLKVPIHTLDGKKIDPKHATPK--NRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFG 311
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 312 PVEETVMLMDQQTKR 326
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 298 TSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 357
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 358 ECKKAQPKEAVTPAAQLLQKRIMLGTL 384
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ H ++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHPVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 201 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 260
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 261 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 318
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 319 PVEETVMLMDQQTKR 333
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 305 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 364
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 365 ECKKAQPKEAVTPAAQLLQKRIMLGTL 391
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 258 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 315
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 316 PVEETVMLMDQQTKR 330
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 302 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 361
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 362 ECKKAQPKEAVTPAAQLLQKRIMLGTL 388
>gi|119617172|gb|EAW96766.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_f [Homo
sapiens]
Length = 208
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
T + + YF +YG++ +M + +G+ RGF FVTF D ++V
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 159
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G ++DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDR 140
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + +F +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
+ PK+ K+F+GGL T+ LR+ F ++G +M+ V+M P T R+
Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRS 54
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 57 YRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGR 116
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DLR +F YG + + I++ +
Sbjct: 117 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDK 174
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG + ++ + ETG+ RGFGFV F D + V + H + G+ +D K
Sbjct: 156 RQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKAL 215
Query: 278 PR 279
R
Sbjct: 216 SR 217
>gi|148664549|gb|EDK96965.1| mCG123153 [Mus musculus]
Length = 153
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPRT-LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G ++DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDR 140
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + +F +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
+ PK+ K+F+GGL T+ LR+ F ++G +M+ V+M P T R+
Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRS 54
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 73 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 132
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 133 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 191
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 192 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 242
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D N+V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 147 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 206
Query: 269 RTIDPKPCNPRT-LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 207 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 265
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++
Sbjct: 241 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 288
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVGEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V + HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 14 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 73
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 74 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 132
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 108 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 167
Query: 272 DPKPC 276
+ +
Sbjct: 168 EVRKA 172
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
LQ PK+ K+F+GGL T+ LR+ F ++G + + V+M P T R+
Sbjct: 4 LQSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRS 54
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGF+ FA+ V + H +DGR ++ K
Sbjct: 23 RDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEA-GVAERVTMDKHMIDGRMVEAKKAV 81
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K N S K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 82 PRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVM 138
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 123 RRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 182
Query: 278 PR 279
P+
Sbjct: 183 PK 184
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 89 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAMAM 148
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 149 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 202
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 203 KEEEPVKK 210
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 171 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 230
Query: 278 PRTL 281
P+ +
Sbjct: 231 PKEV 234
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 172 PTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCV 231
P G + GAT +PT PN K ++ T ++ YF+R+GEV++C
Sbjct: 23 PEAVTENGSHSDGAT--SPTTPNGDTSKPTKIFVGGLSWQTSSEKLAEYFARFGEVLECN 80
Query: 232 VMKNNETGRSRGFGFVTFADPNNVGVVIQNC---PHTLDGRTIDPKPCNP------RTLQ 282
+M++ T RSRGFGF+TF DP +V V++ P LD + IDPK P + +
Sbjct: 81 IMRDPSTRRSRGFGFITFKDPASVSKVLETHAQEPIVLDDKNIDPKIAVPPKRPGNKVMS 140
Query: 283 KP-KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
P S ++F+GGL S+ TE DL+ +F +G + +V +M R
Sbjct: 141 PPWTAPSQTKRIFVGGLSSDSTEMDLQEYFQEFGTIQDVQLMYDR 185
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q YF +G + D +M + T R RGFGFVTF V H + G+ ++ K
Sbjct: 167 QEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEKVCSIQYHDIRGKKVEVK 223
>gi|343427636|emb|CBQ71163.1| related to HRP1-subunit of cleavage factor I [Sporisorium reilianum
SRZ2]
Length = 588
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 35/139 (25%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYFS++GEV C VM++N TGRSRGF F+ F +P V V+ H LDG+ IDPK
Sbjct: 184 RRYFSQFGEVGHCTVMRDNMTGRSRGFAFLNFVNPKAVNTVVVR-EHYLDGKVIDPKRAI 242
Query: 278 PRTLQKPKKNSSF------------------------------PKVFLGGLPSNVTETDL 307
PR P+++S+F K+F+GGLP++VT
Sbjct: 243 PR----PQRDSNFNAHHNGGQGQASYNNNGGGAGGGGGYNAQSQKLFVGGLPASVTPASF 298
Query: 308 RTFFNRYGKVMEVVIMSPR 326
R FF ++G + E M R
Sbjct: 299 RMFFEQFGTLAECTCMMDR 317
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC--- 276
+F ++G + +C M + ETG RGFGF+T+ D + V+ P DG+ +D K
Sbjct: 301 FFEQFGTLAECTCMMDRETGNPRGFGFLTYQDDAALQHVLSTRPLVFDGKEVDVKRAQSK 360
Query: 277 -NPRTLQ-KPKKNSSFPKVFLGGL 298
+P++LQ + ++ P++ +GG+
Sbjct: 361 NDPQSLQIRRQQRIDNPEMAMGGM 384
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 31 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 90
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 91 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 138
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 114 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 173
Query: 272 DPKPC 276
+ +
Sbjct: 174 EVRKA 178
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 17 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 76
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 77 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 135
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 111 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 191 TGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 250
+G + S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF
Sbjct: 189 SGGSMSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 248
Query: 251 DPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTF 310
+P V V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +
Sbjct: 249 EPCTVDKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAY 306
Query: 311 FNRYGKVME-VVIMSPRTIR 329
F+++G V E V++M +T R
Sbjct: 307 FSQFGAVEETVMLMDQQTKR 326
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 298 TSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 357
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 358 ECKKAQPKEAVTPAAQLLQKRIMLGTL 384
>gi|171451954|dbj|BAG15905.1| DAZAP [Dugesia japonica]
Length = 354
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G+V++ VM ++ TGRSRGFG+V ++D V V+ + H L+G+ IDPKPCN
Sbjct: 30 YFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVM-STKHHLEGKEIDPKPCNVN 88
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ ++ K+F+GG+ E LR FF ++G + E+ +M ++
Sbjct: 89 MKGRSRRQ---LKIFVGGIAPEHNEETLRDFFKQFGNITELTLMKDQS 133
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + + +MK+ R RGF FV F D V +I + T+ + ++ KP P+
Sbjct: 116 FFKQFGNITELTLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIKPMEPQ 175
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PHT+DG
Sbjct: 25 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHTIDG 84
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 85 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 144
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQ 362
+ G V P ++ +QK T V++ L R +VQ
Sbjct: 145 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQ 193
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 119 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 178
Query: 272 DPKPCNPRTLQKPKKNS 288
+ + R + +NS
Sbjct: 179 EVRKALSRQEMQEVQNS 195
>gi|391347114|ref|XP_003747810.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Metaseiulus occidentalis]
Length = 290
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T +Q + YF +GE+++C V+ +++ RSRGFGFVTFA +V V+++ PHT+D
Sbjct: 80 SWRTTSQTLRNYFMPFGEIVECSVLYDDQQ-RSRGFGFVTFAHVGSVVKVLKSAPHTIDN 138
Query: 269 RTIDPKPCN----PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNR-YGKVMEVVIM 323
R +D KP R KPK + + KVF+GGLP V D++ FF+R YG V++ +M
Sbjct: 139 RVVDAKPSKGGTESRITPKPKLPNQYLKVFVGGLPYYVNNYDIKCFFDRHYGGVLDAAVM 198
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 220 YFSR-YGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+F R YG V+D VM T SRGF FV F + +++ V+++ + G + KP P
Sbjct: 184 FFDRHYGGVLDAAVMYCQATQTSRGFAFVQFENQSSMERVLEDRWVIIRGAKCECKPALP 243
Query: 279 RT 280
R
Sbjct: 244 RI 245
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 196 SGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV 255
S P+ GK ++ T + + YF+ +G V D ++MK+ T RSRGFGF+TF +P V
Sbjct: 199 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 258
Query: 256 GVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
V++ HTLDG+ IDPK P+ +P++ + K+F+GG+ + + +++ +F+++G
Sbjct: 259 EKVLKVPIHTLDGKKIDPKHATPKN--RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFG 316
Query: 316 KVME-VVIMSPRTIR 329
V E V++M +T R
Sbjct: 317 PVEETVMLMDQQTKR 331
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A+ + YFS++G V + V++ + +T R RGFGFVTF + + V V + HT+ + +
Sbjct: 303 TSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKV 362
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGL 298
+ K P+ P ++ LG L
Sbjct: 363 ECKKAQPKEAVTPAAQLLQKRIMLGTL 389
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
LQ PK+ K+F+GGL T+ LR+ F ++G + + V+M P T R+
Sbjct: 4 LQSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRS 54
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 26/131 (19%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI---DPK 274
+ YF +YGEV++ V+M++ TGR+RGFGF+ FADP VI H +DGR I D
Sbjct: 23 REYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME-KHMIDGRMIHDDDDG 81
Query: 275 PCNPRTLQKPKKN----------------------SSFPKVFLGGLPSNVTETDLRTFFN 312
+P + + KK S K+F+GGL S VTE D R +F
Sbjct: 82 VLDPSMVVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEADFRKYFE 141
Query: 313 RYGKVMEVVIM 323
++G + +VV+M
Sbjct: 142 QFGTITDVVVM 152
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 137 RKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAV 196
Query: 278 PRTL 281
P+ L
Sbjct: 197 PKEL 200
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+F+GG+ + E LR +F++YG+V+E VIM R
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDR 41
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+D V+M + +GR RGFGFVTFADP V++ H +DGR ++ K PR
Sbjct: 19 YFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE-DHVIDGRAVEVKRTVPR 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + + K+F+GG+P ++TE +L+ +F+ YG +++ IM
Sbjct: 78 EDMEVRVTRT-KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIM 120
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTI 271
+ YFS YG ++D +M +++TGRSRGFGFVTF + V + + H L G+ +
Sbjct: 105 KEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGKQV 159
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF++YG V++ +MK+N TGRSRGFGF+TF + ++V V++ H LDG+ IDPK PR
Sbjct: 183 YFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDEVVK-TQHILDGKVIDPKRAIPR 241
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ ++V + FF +YG +++ +M
Sbjct: 242 EEQDKT-----GKIFVGGIGADVRPKEFEEFFAQYGTIIDAQLM 280
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F++YG +ID +M + +TGRSRGFGFVT+ P+ V V Q+ G+ I+ K
Sbjct: 265 EEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAE 324
Query: 278 PRTLQK 283
PR QK
Sbjct: 325 PRNNQK 330
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE LR +FN+YG V+E+ IM
Sbjct: 165 KMFIGGLNWETTEDTLRDYFNKYGSVVELKIM 196
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T + +++F ++G+++D VVMK+ +T +SRGFGFVT+A V PH +DGR
Sbjct: 53 YRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARAFMVDEAQAARPHRVDGR 112
Query: 270 TIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR L KP+ +S+ K+F+GGL +V E DL+ +F+ +G + V +++ +
Sbjct: 113 EVEPKRAVPRDLIGKPEASSTVKKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEK 170
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
Q+YFS +G + V+ ET + RGF FV F D + V V+ HT+ GR +D K
Sbjct: 152 QKYFSTFGPIASVNVVTEKETNKKRGFAFVEFDDYDPVDKVVLIRDHTVKGRHLDVKKA 210
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRT 327
R P T+++ + F K+F+GGL T+ L+ F ++G++++VV+M P+T
Sbjct: 22 RETKPPATEQHTVKEKPEAEQFRKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKT 81
Query: 328 IRA 330
++
Sbjct: 82 RKS 84
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKALSRQEMQEVQS 198
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 34/162 (20%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F YG+V+ VM+ TG+ RGFGFV FADPN + V+++ H +DGRT+D K
Sbjct: 23 KEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED-KHVIDGRTVDAKKAF 81
Query: 278 PRTLQKPKK-----------------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 320
R Q+ N K+F+GGLP +TE R +F YG V +V
Sbjct: 82 SREDQQISVTSRGGNSNSGMNSGNGGNIRTKKIFVGGLPPTLTEEKFRQYFESYGNVTDV 141
Query: 321 VIM------SPRTIRAGITRVPTQELPVQKEATAVQQVLRRS 356
V+M PR G T++ AV +VL +S
Sbjct: 142 VVMYDQNTGRPRGF--GFISFDTED--------AVDRVLHKS 173
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF YG V D VVM + TGR RGFGF++F + V V+ H L+G+ ++ K
Sbjct: 129 RQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGKQVEVKRAL 188
Query: 278 PR 279
P+
Sbjct: 189 PK 190
>gi|71013252|ref|XP_758567.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
gi|46098225|gb|EAK83458.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
Length = 588
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 29/133 (21%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYFS++GEV +C +M++N TGRSRGF F+ F DP V V+ H LDG+ IDPK
Sbjct: 186 RRYFSQFGEVGNCAIMRDNMTGRSRGFAFLNFVDPKAVNTVMVR-EHYLDGKVIDPKRAI 244
Query: 278 PRTLQKPKKN------------------------SSFPKVFLGGLPSNVTETDLRTFFNR 313
PR P+ N +S K+F+GGLP +VT RTFF +
Sbjct: 245 PR----PQHNQQGGGHHNNYNNGGGGGGGGGSYSASSQKLFVGGLPPSVTPATFRTFFEQ 300
Query: 314 YGKVMEVVIMSPR 326
+G + + M R
Sbjct: 301 FGTLSDCTCMMDR 313
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC--- 276
+F ++G + DC M + ETG+ RGFGF+T+AD +++ V+ P DG+ +D K
Sbjct: 297 FFEQFGTLSDCTCMMDRETGKPRGFGFLTYADDSSLNHVLNTRPIVFDGKEVDVKRAQSK 356
Query: 277 -NPRTLQ 282
+P++LQ
Sbjct: 357 NDPQSLQ 363
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS+YG V++ +MK+ TGRSRGFGF+TF +P++V V++ H LDG+ IDPK
Sbjct: 213 KNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSVDEVVK-TQHILDGKVIDPKRSI 271
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K+F+GG+ ++V + FF +YG +++ +M
Sbjct: 272 PREEQDKTG-----KIFVGGIGTDVRPKEFEDFFAQYGTIIDAQLM 312
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F++YG +ID +M + +TGRSRGFGFVT+ + V V QN G+ I+ K
Sbjct: 297 EDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSGDAVDRVCQNKYIEFKGKQIEIKRAE 356
Query: 278 PRTLQK 283
PR Q+
Sbjct: 357 PRHNQR 362
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F + +V V+ H LDGR IDPK
Sbjct: 116 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQKEHRLDGRVIDPKKAMAM 175
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 176 ------KKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITF 229
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 230 KEEDPVKK 237
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + + V +++ H + G + K
Sbjct: 198 REYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVGGSKCEIKVAQ 257
Query: 278 PRTL 281
P+ +
Sbjct: 258 PKEV 261
>gi|444317072|ref|XP_004179193.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
gi|387512233|emb|CCH59674.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
Length = 623
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF++YG V+D +MK+N TG+SRGFGF+TF ++V V++ H LDG+ IDPK PR
Sbjct: 189 YFNKYGNVVDLKIMKDNNTGKSRGFGFLTFEKSSSVDEVVK-TQHILDGKVIDPKRAIPR 247
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q K+F+GG+ ++V + FF +YG +++ +M +
Sbjct: 248 EEQDKT-----GKIFIGGIGADVRPKEFEEFFAKYGNIIDAQLMLDK 289
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F++YG +ID +M + +TGRSRGFGFVT+ P+ V V Q+ G+ I+ K
Sbjct: 271 EEFFAKYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQHKFIEFKGKQIEIKRAQ 330
Query: 278 PRTLQ 282
PR Q
Sbjct: 331 PRHNQ 335
>gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335), partial [Homo sapiens]
Length = 298
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 11 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 70
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 71 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 118
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 94 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 153
Query: 272 DPKPC 276
+ +
Sbjct: 154 EVRKA 158
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRT- 270
T Q + YFS++GEV++C VM+++ TGRSRGFGF+TF D V +V+ H LDG+
Sbjct: 126 TTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK-EHFLDGKIV 184
Query: 271 --------IDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
IDPK PR Q+ K+F+GG+ T+ + + +F ++G+V++ +
Sbjct: 185 SYRLIPQQIDPKRAIPRDEQEKTS-----KIFVGGVSQETTDQEFKEYFAQFGRVVDATL 239
Query: 323 MSPR 326
M +
Sbjct: 240 MMDK 243
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T Q + YF+++G V+D +M + +TGR RGFGFVTF V I N P + G+ I
Sbjct: 219 TTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACI-NVPLEIHGKPI 277
Query: 272 DPKPCNPRTLQKPKKNSSFPKVF 294
+ K PR + ++ +S F
Sbjct: 278 EVKKAQPRGNLREEEEASRRNKF 300
>gi|198450380|ref|XP_001357960.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131011|gb|EAL27096.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 468
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 58 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDKAQENRPHIIDGKTVEAKRALPR 117
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G+V+ V +++ +T R G +
Sbjct: 118 PERETRETNISVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIE 177
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 178 FDDYDAVDKAILQKQ 192
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V+ ++ + TG+ RGF F+ F D + V I H++ +D K
Sbjct: 147 REYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQKQHSIKYVHVDVKKS- 205
Query: 278 PRTLQKPKKNSSFP 291
L+K K + P
Sbjct: 206 IYNLEKKDKQAQGP 219
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE L+ F+ ++GKV++VV+M
Sbjct: 36 EHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVM 71
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 182 AGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETG 239
+G GA N S AGK ++ T + + YF+++GEV+DC + + TG
Sbjct: 54 SGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 240 RSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLP 299
RSRGFGF+ F D ++V V+ H LDGR IDPK K K+F+GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGLN 167
Query: 300 SNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQELPVQKEATAVQQVLRRSS 357
TE +R +F ++G++ +E+ I R G + KE V++VL +
Sbjct: 168 PEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF------KEEDPVKKVLEKKF 221
Query: 358 TT 359
T
Sbjct: 222 HT 223
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF R+GEV + V+M++ TGR+RGFGF+ FA+ V + H +DGR ++ K
Sbjct: 46 RDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEA-GVAERVTMDKHMIDGRMVEAKKAV 104
Query: 278 PRTLQK--PKKNSS---------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR Q K N S K+F+GGL SNVTE + R +F ++G + +VV+M
Sbjct: 105 PRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVM 161
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+RYF ++G + D VVM ++ T R RGFGF+T+ + V + H L+G+ ++ K
Sbjct: 146 RRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAV 205
Query: 278 PR 279
P+
Sbjct: 206 PK 207
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 15 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 74
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 75 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 133
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 109 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 168
Query: 272 DPKP 275
+ +
Sbjct: 169 EVRK 172
>gi|194907807|ref|XP_001981631.1| GG12167 [Drosophila erecta]
gi|190656269|gb|EDV53501.1| GG12167 [Drosophila erecta]
Length = 472
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 51 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDKAQENRPHIIDGKTVEAKRALPR 110
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G+V+ V +++ +T R G V
Sbjct: 111 PERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVE 170
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 171 FDDYDAVDKAILKKQ 185
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 265 TLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
L + D + R + K+F+GGL TE +L+ F+ ++GKV++VV+M
Sbjct: 6 VLSEESSDVHVISEREDDDICELEHLRKLFIGGLAPYTTEENLKVFYGQWGKVVDVVVM 64
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK--- 274
+ YF YG++ D +++K+ T RSRGFGFVTF + + + ++ N PH LD + IDPK
Sbjct: 34 RNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILLNSPHFLDSKKIDPKIAI 93
Query: 275 PCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
P P + K KVF+GGL +N DL FF +YGK+ +M ++
Sbjct: 94 PKKPDLVDKSINTEKTRKVFIGGLSNNTVHKDLEAFFGKYGKIESCELMMDKS 146
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F +YG++ C +M + T R RGFGFV F + H ++ + ++ K
Sbjct: 127 EAFFGKYGKIESCELMMDKSTNRHRGFGFVMFEKEEIANHICNIRYHEINSKMVEAKKAL 186
Query: 278 PRTL 281
P+ L
Sbjct: 187 PKDL 190
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGEV VVM++ TGR RGFGFV FADP+ + V+Q H +DGRT++ K
Sbjct: 23 KEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE-KHIIDGRTVEAKRAL 81
Query: 278 PRTLQKPKK---------------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
R Q+ N K+F+GGLP ++E R +F +G V +VV+
Sbjct: 82 SREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVV 141
Query: 323 MSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
M ++ + G T++ AV +VL ++
Sbjct: 142 MYDQSTQRPRGFGFVSFDTED--------AVDRVLYKT 171
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D VVM + T R RGFGFV+F + V V+ H L+G+ ++ K
Sbjct: 127 RQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 222 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 281
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 282 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 336
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 337 TDEEPVKK 344
>gi|390177202|ref|XP_003736301.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858945|gb|EIM52374.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 462
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 58 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDKAQENRPHIIDGKTVEAKRALPR 117
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G+V+ V +++ +T R G +
Sbjct: 118 PERETRETNISVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIE 177
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 178 FDDYDAVDKAILQKQ 192
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V+ ++ + TG+ RGF F+ F D + V I H++ +D K
Sbjct: 147 REYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQKQHSIKYVHVDVKKSI 206
Query: 278 PRTLQKPKK 286
+K K+
Sbjct: 207 YNLEKKDKQ 215
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE L+ F+ ++GKV++VV+M
Sbjct: 36 EHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVM 71
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
+YF RYGE+ D V+MK+ TGR RGFGF+T+AD + V VIQ H ++ + ++ K P
Sbjct: 36 KYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE-NHIINDKQVEIKRTIP 94
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
+ + + K+F+GG+P+ V+E +L+ FF+++G V+E I+ T +
Sbjct: 95 KGASQTNDFKT-KKIFVGGIPATVSEDELKIFFSKHGNVVEHEIIRDHTTK 144
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTID 272
+FS++G V++ +++++ T RSRGFGFV F V ++ DG ID
Sbjct: 125 FFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLA------DGNMID 171
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 63 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAMAM 122
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 123 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 176
Query: 338 QELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 177 ------KEEDPVKKVLEKKFHT 192
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + + V V++ HT+ G + K
Sbjct: 145 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEDPVKKVLEKKFHTISGSKCEIKVAQ 204
Query: 278 PRTL 281
P+ +
Sbjct: 205 PKEV 208
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 8/64 (12%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRTIRA-GITRVPTQELPVQKEATAV 349
K+F+GGL + ++ DL+ +F ++G+V++ I M P T R+ G + + K+AT+V
Sbjct: 45 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFI------LFKDATSV 98
Query: 350 QQVL 353
++VL
Sbjct: 99 EKVL 102
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG+V D +M++N TGRSRGFGF+TFA+ ++V V++ H LDG+ IDPK PR
Sbjct: 227 YFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVVK-TQHILDGKVIDPKRAIPR 285
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ +V + FF+++G +++ +M
Sbjct: 286 EEQDKTG-----KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLM 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +FS++G +ID +M + +TGRSRGFGF+T+ P+ V V +N G+ I+ K
Sbjct: 309 EEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCENKFIEFKGKRIEIKRAE 368
Query: 278 PRTL 281
PR L
Sbjct: 369 PRHL 372
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAGITR----VPTQELPVQKEAT 347
K+F+GGL TE +L+ +F++YG+V ++ IM R G +R + E E
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIM--RDNATGRSRGFGFLTFAEASSVDEVV 266
Query: 348 AVQQVL 353
Q +L
Sbjct: 267 KTQHIL 272
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 89 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 148
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 149 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 202
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 203 KEEEPVKK 210
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 171 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 230
Query: 278 PRTL 281
P+ +
Sbjct: 231 PKEV 234
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 31 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 90
Query: 269 RTIDPKPCNPRT-LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 91 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 149
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 125 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNG 181
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 35 SFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDG 94
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 95 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 153
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 129 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 188
Query: 272 DPKP 275
+ +
Sbjct: 189 EVRK 192
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGFVT+AD + V VIQ+ H ++G+ +
Sbjct: 53 TSAQFI-KHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDT-HVINGKQV 110
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K P+ K + K+F+GG+P+ VTE + + FF +YG+V + IM +
Sbjct: 111 EIKRTIPKGAIGAKDFKT-KKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHS 165
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTF 249
+F++YGEV D +M+++ T RSRGFGFVTF
Sbjct: 148 FFTQYGEVKDHQIMRDHSTSRSRGFGFVTF 177
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 20 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 79
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 80 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 138
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 114 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 173
Query: 272 DPKP 275
+ +
Sbjct: 174 EVRK 177
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 59 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 118
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 119 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 177
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 178 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 228
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 42 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 83
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVLR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YGEV+D V+M + +GR RGFGFVTFADP V++ H +DGR ++ K PR
Sbjct: 4 YFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE-DHVIDGRAVEVKRTVPR 62
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + + K+F+GG+P ++TE +L+ +F+ YG +++ IM
Sbjct: 63 EDMEVRVTRT-KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIM 105
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI-QNCPHTLDGRTI 271
+ YFS YG ++D +M +++TGRSRGFGFVTF + V + + H L G+ +
Sbjct: 90 KEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGKQV 144
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + +F +YG++ +M + +G+ RGF FVTF D ++V +I HT++G
Sbjct: 116 TEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G ++DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDR 140
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + +F +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV DC + + TGRSRGFGF+ F +P +V V++ H LDGR IDPK
Sbjct: 109 YFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLIDPKKAMAM 168
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 169 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITF 222
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 223 KEEDPVKK 230
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + + V V++ H + G + K
Sbjct: 191 REYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQ 250
Query: 278 PRTL 281
P+ +
Sbjct: 251 PKEV 254
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ R F FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|331284184|ref|NP_001193585.1| RNA-binding protein Musashi homolog 2 [Bos taurus]
Length = 354
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 31/140 (22%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS++GE+ +C+VM++ T RSRGFGFVTFADP +V V+ H LD +TIDPK
Sbjct: 34 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 93
Query: 278 PRTLQKPK---------------KNSSFP---------------KVFLGGLPSNVTETDL 307
PR Q PK + S P K+F+GGL +N D+
Sbjct: 94 PRRAQ-PKGTFLTQGSNPRLLHWQADSLPLSHQDPRHAMVTRTKKIFVGGLSANTVVEDV 152
Query: 308 RTFFNRYGKVMEVVIMSPRT 327
+ +F ++GKV + ++M +T
Sbjct: 153 KQYFEQFGKVEDAMLMFDKT 172
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + ++YF ++G+V D ++M + T R RGFGFVTF + + V V + H ++ + +
Sbjct: 147 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV 206
Query: 272 DPKPCNPRTLQKP 284
+ K P+ + P
Sbjct: 207 ECKKAQPKEVMFP 219
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D +++ ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + +F +YG++ +M + +G+ RGF FVTF D ++V +I HT++G
Sbjct: 116 TEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 182 AGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETG 239
+G GA N S AGK ++ T + + YF+++GEV+DC + + TG
Sbjct: 54 SGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 240 RSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLP 299
RSRGFGF+ F D ++V V+ H LDGR IDPK K K+F+GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGLN 167
Query: 300 SNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQELPVQKEATAVQQVLRRSS 357
TE +R +F ++G++ +E+ I R G + KE V++VL +
Sbjct: 168 PEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF------KEEDPVKKVLEKKF 221
Query: 358 TT 359
T
Sbjct: 222 HT 223
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YGEV VVM++ TGR RGFGFV FADP+ + V+Q H +DGRT++ K
Sbjct: 23 KEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE-KHIIDGRTVEAKRAL 81
Query: 278 PRTLQKPKK---------------NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
R Q+ N K+F+GGLP ++E R +F +G V +VV+
Sbjct: 82 SREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVV 141
Query: 323 MSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
M ++ + G T++ AV +VL ++
Sbjct: 142 MYDQSTQRPRGFGFVSFDTED--------AVDRVLYKT 171
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF +G V D VVM + T R RGFGFV+F + V V+ H L+G+ ++ K
Sbjct: 127 RQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRAL 186
Query: 278 PR 279
P+
Sbjct: 187 PK 188
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 182 AGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETG 239
+G GA N S AGK ++ T + + YF+++GEV+DC + + TG
Sbjct: 54 SGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 240 RSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLP 299
RSRGFGF+ F D ++V V+ H LDGR IDPK K K+F+GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGLN 167
Query: 300 SNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQELPVQKEATAVQQVLRRSS 357
TE +R +F ++G++ +E+ I R G + KE V++VL +
Sbjct: 168 PEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF------KEEDPVKKVLEKKF 221
Query: 358 TT 359
T
Sbjct: 222 HT 223
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 15/158 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PHT+DGR ++PK R
Sbjct: 26 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAR 85
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT--IRAGITRV- 335
KP + + K+F+GG+ + E LR +F YGK+ + I++ R + G V
Sbjct: 86 EESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVT 145
Query: 336 -----PTQELPVQKEAT------AVQQVLRRSSTTKVQ 362
P ++ +QK T V++ L R +VQ
Sbjct: 146 FDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQ 183
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 109 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 168
Query: 272 DPKPCNPRTLQKPKKNS 288
+ + R + +NS
Sbjct: 169 EVRKALSRQEMQEVQNS 185
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 285 KKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
++ F K+F+GGL TE LR+++ ++GK+ + V+M
Sbjct: 1 REKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVM 39
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 44 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 103
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 104 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 162
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 163 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 213
>gi|195503950|ref|XP_002098871.1| GE10609 [Drosophila yakuba]
gi|194184972|gb|EDW98583.1| GE10609 [Drosophila yakuba]
Length = 473
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 52 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDKAQENRPHIIDGKTVEAKRALPR 111
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G+V+ V +++ +T R G V
Sbjct: 112 PERESRETNISVKKLFVGGLKDNHDEDCLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVE 171
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 172 FDDYDAVDKAILKKQ 186
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE +L+ F+ ++GKV++VV+M
Sbjct: 30 EHLRKLFIGGLAPYTTEDNLKVFYGQWGKVVDVVVM 65
>gi|348531962|ref|XP_003453476.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 315
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 177 AGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNN 236
AG T + AGK ++ T + YFS++GEV DC + ++
Sbjct: 32 AGDEEQDNNTDGGKIDASKGEEDAGKVFVGGLSWDTSKTDLKDYFSKFGEVSDCTIKMDS 91
Query: 237 ETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLG 296
TGRSRGFGFV F D +V V++ H LDGR IDPK R + K K+F+G
Sbjct: 92 NTGRSRGFGFVLFKDSASVDKVLEQKEHRLDGRNIDPK----RAM--AMKKDPVKKIFVG 145
Query: 297 GLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPTQELPVQKEATAVQQVLR 354
GL TE +R +F +G++ + + + P++ R G + KE T+V++ L
Sbjct: 146 GLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFI------TYKEETSVKKCLE 199
Query: 355 RS 356
+
Sbjct: 200 KK 201
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 44 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 103
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 104 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 162
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 163 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 213
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++GE++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 26 YRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGR 85
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DL+ +F YG + + I++ +
Sbjct: 86 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLKQYFQSYGTINSISIVTDK 143
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPC 276
++YF YG + ++ + ETG+ RGFGFV F D + V + H + G+ +D K
Sbjct: 125 KQYFQSYGTINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 8/132 (6%)
Query: 195 PSGPSAG-KPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
PSG SAG K ++ T + + YF +YGEV D VVM++ +T R RGFGF+TF DP
Sbjct: 54 PSGGSAGAKLFLGGLSWDTTEEKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITFTDPA 113
Query: 254 NVGVVIQNCPHTLDGRTIDPKPCNPRTL--QKPKKNSSFPKVFLGGLPSNVTETDLRTFF 311
HT+DGR ID KP P Q+P+ K+F+GGL + + L+ +F
Sbjct: 114 AAQAACAE-SHTIDGRQIDAKPSVPHGEGGQQPRSK----KIFVGGLAPDTEDVHLKQYF 168
Query: 312 NRYGKVMEVVIM 323
+YG V+E ++M
Sbjct: 169 EQYGTVVEALVM 180
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 216 YQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV-GVVIQNCPHTLDGRTIDPK 274
+ ++YF +YG V++ +VM ++ +GRSRGFGFVTF + ++V V H L G+ ++ K
Sbjct: 163 HLKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSVEKVFAAGQMHELGGKQVEVK 222
Query: 275 PCNPR 279
P+
Sbjct: 223 SATPK 227
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 284 PKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
P S+ K+FLGGL + TE L+ +F +YG+V +VV+M R R
Sbjct: 54 PSGGSAGAKLFLGGLSWDTTEEKLKEYFLKYGEVHDVVVMRDRQTR 99
>gi|358342623|dbj|GAA50048.1| RNA-binding protein Musashi, partial [Clonorchis sinensis]
Length = 694
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GE+ + +VM +N TGRSRGFG++ + + +V V+ H +D + +DPK CN
Sbjct: 450 YFSKFGEIEESIVMMDNRTGRSRGFGYIKYKESTSVDSVLAQKLHVVDHKEVDPKRCN-- 507
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
+ KN K+F+GG+ E+ +R FF++YG+V +V +++
Sbjct: 508 -INMKGKNRRSLKIFVGGISFEHDESTIRNFFSKYGRVTDVNLLT 551
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS+YG V D ++ + R RGF FV F D V +I+ LDG+ ++ K P
Sbjct: 537 FFSKYGRVTDVNLLTSPNKQRHRGFAFVGFDDEEVVKNLIRMHFLNLDGKQVEVKAMEPP 596
Query: 280 TLQKP 284
Q+P
Sbjct: 597 ISQRP 601
>gi|195375642|ref|XP_002046609.1| GJ12977 [Drosophila virilis]
gi|194153767|gb|EDW68951.1| GJ12977 [Drosophila virilis]
Length = 247
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF RYG++ + +VMK+ T RSRGFGFVTF+DPN+V V+ H LDG+ +DPK PR
Sbjct: 58 YFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPR 117
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
PK + K+F+GGL + T D++++F ++G
Sbjct: 118 RAH-PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 152
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 162 NWNWNMPQNGPTTPAAGGP---PAGGATGAAP-TGPNPSGPSAGKPPADYSAYGTYAQYQ 217
NW+ + P GG P+G G + + AGK ++ T +
Sbjct: 45 NWSCDYRLKVPNQKKNGGRGSRPSGNQNGEGDQINASKNEEDAGKMFVGGLSWDTSKKDL 104
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++GEV+DC + + TGRSRGFGF+ F D ++V V+ H LDGR IDPK
Sbjct: 105 KDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM 164
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRV 335
K K+F+GGL TE +R +F ++G++ +E+ I R G +
Sbjct: 165 AM------KKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFI 218
Query: 336 PTQELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 219 TF------KEEDPVKKVLEKKFHT 236
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G++ D +M++N TGRSRGFGF+TF +V V++ H LDG+ IDPK PR
Sbjct: 172 YFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKKQ-HVLDGKLIDPKRAIPR 230
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ + VTE D +F+++G +++ +M
Sbjct: 231 EEQDKTG-----KIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLM 269
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G +ID +M + +TGRSRGFGFVT+ P+ V V N L GR+++ K PR
Sbjct: 256 YFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSMEIKRAEPR 315
Query: 280 TLQKPKKNSSFP 291
Q+ ++ ++ P
Sbjct: 316 NQQQNQRTNANP 327
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V+DC + + TGRSRGFGFV FAD +V V+Q H LDGR IDPK
Sbjct: 100 KEYFKKFGPVVDCTIKIDPVTGRSRGFGFVLFADGASVEKVLQPQEHKLDGRIIDPKRAK 159
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRV 335
R Q P K+F+GGL E +LR +F ++G + EV + R R G +
Sbjct: 160 ARGGQPP-----ITKIFVGGLNPEYPENELRDYFTKFGAIKEVELPIDRATNKRRGFCFI 214
Query: 336 PTQELPVQKEATAVQQVLRRSSTTKVQ 362
++ +E Q L ++ +V+
Sbjct: 215 EFEKEDSVEEICKQQFHLLGNNKCEVK 241
>gi|449533488|ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 29/159 (18%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YFS YGEV+ VVM++ T R RGFGFV F+DP+ + V+Q+ HT+DG+T++ K
Sbjct: 23 KDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD-KHTIDGKTVEAKRAL 81
Query: 278 PRTLQKPKKNSSF----------------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVV 321
R Q+ +S K F+GGLP +TE + +F YG V +VV
Sbjct: 82 SREEQQTPARASNSNGRNSGGSGGGNMRTKKXFVGGLPPTLTEEGFKEYFEAYGHVTDVV 141
Query: 322 IMSPRTIRA----GITRVPTQELPVQKEATAVQQVLRRS 356
+M + R G T+E AV +VL ++
Sbjct: 142 VMYDQNTRRPRGFGFISFDTEE--------AVDRVLHKT 172
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YG V D VVM + T R RGFGF++F V V+ H L+G+ ++ K
Sbjct: 128 KEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 187
Query: 278 PR 279
P+
Sbjct: 188 PK 189
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ + RSRGFGFVT+ + V + PH +DG
Sbjct: 22 SFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R +P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++
Sbjct: 116 TEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVN 171
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 42 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMSARPHSIDG 101
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 102 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 160
Query: 328 IRAGITR----------VPTQELPVQK------EATAVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 161 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNTEVRKALSRQEMQEVQS 211
>gi|449670055|ref|XP_004207181.1| PREDICTED: uncharacterized protein LOC101237004 [Hydra
magnipapillata]
Length = 422
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
YF ++G+V D ++M +N T RSRGFGFVTF DPN+V V+ + H + G+ +D K P
Sbjct: 43 EYFQQFGDVSDSIIMVDNITSRSRGFGFVTFVDPNSVNKVLAHSRHCIHGKVVDAKKAVP 102
Query: 279 R-------------TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI 322
+ T + +N KVF+GG+ TE+DL + F YG V+EV I
Sbjct: 103 KGPNQGNILRAMGITSNRADRNPD-CKVFVGGVAQGTTESDLESHFQLYGNVLEVKI 158
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A GT + +F YG V++ + K+ T R+RGF FV F D +V + ++G
Sbjct: 135 AQGTTESDLESHFQLYGNVLEVKIPKDQNTHRARGFSFVLFEDRESVLAATKERYQKING 194
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKV 293
+T N + KK+ + +V
Sbjct: 195 KTESLWNLNLFIIVFEKKDKASVEV 219
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F ++GK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDR 140
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF ++G++ +M + +G+ +GF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQFGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMSARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQAP 364
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSS 187
>gi|324506130|gb|ADY42625.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 346
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S +GE++DCVVM++ T RSRGFGFVT++ + V ++N PH +DG+T+DPK
Sbjct: 38 KEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEVNAAMENRPHVIDGKTVDPKRAV 97
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ TE +F+ YG V++ ++ +
Sbjct: 98 PRDQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDK 147
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVG--VVIQNCPHTLDGRTIDPKPCN 277
YFS YG VI C V+ + TG+ RGF FVTF D + V V+I+N H ++ D K
Sbjct: 131 YFSNYGNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVLIKN--HMINNARCDVK--- 185
Query: 278 PRTLQKPKKNSS 289
+ L K + N +
Sbjct: 186 -KALSKEEMNRA 196
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMSARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMSARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DC+VM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|49617279|gb|AAT67404.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
Length = 152
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 3 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 62
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 63 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 121
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTL 266
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT+
Sbjct: 97 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTV 151
>gi|444727997|gb|ELW68462.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR 135
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFV F D + VG ++ HT++G
Sbjct: 111 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVPFDDHDPVGKIVLQKYHTINGHNA 170
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 171 EVRKALSR 178
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 30 REHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAV 89
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 90 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 117 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 176
Query: 274 KP 275
K
Sbjct: 177 KK 178
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D ++V V+ H LDGR IDPK
Sbjct: 87 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM 146
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPT 337
K K+F+GGL TE +R +F ++G++ +E+ I R G +
Sbjct: 147 ------KKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF 200
Query: 338 QELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 201 ------KEEDPVKKVLEKKFHT 216
>gi|393911996|gb|EJD76540.1| RNA recognition domain-containing protein [Loa loa]
Length = 309
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++GE++DC+VM++ T RSRGFGFV+F+ + V + PH +DG+T+DPK
Sbjct: 16 KEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEVDAAMAARPHVIDGKTVDPKRAV 75
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR + + N S ++++ G+ TE +F+++GKV++V I++ +
Sbjct: 76 PRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADK 125
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + YFS++G+V+ ++ + TG+ RGF F++F D + V + H + D K
Sbjct: 104 QMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQKSHQIHNYRCDVK 163
Query: 275 P 275
Sbjct: 164 K 164
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F ++GK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF ++G++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQFGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG VID +MK+ TGRSRGFGF+TF ++V V++ H LDG+ IDPK PR
Sbjct: 178 YFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVK-TQHILDGKVIDPKRAIPR 236
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ ++V + FF ++G +++ +M
Sbjct: 237 EEQDKT-----GKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLM 275
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G +ID +M + +TGRSRGFGFVT+ P+ V V QN G+ I+ K
Sbjct: 260 EEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAE 319
Query: 278 PRTLQKPKK 286
PR +QK ++
Sbjct: 320 PRHMQKQQQ 328
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YG++ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGEIEVIEIMTDR 140
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YGE+ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G ++DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ IM+ R
Sbjct: 82 RVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVNEIMTDR 140
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQAP 364
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSS 187
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQAP 364
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSS 187
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDR 140
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + +F +YG++ +M + +G+ RGF FVTF D ++V +I HT++G
Sbjct: 116 TEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFG VT+A V + PH +DG
Sbjct: 21 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVEEVDAAMNARPHKVDG 80
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 81 RAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 139
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 115 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 174
Query: 272 DPKPC 276
+ +
Sbjct: 175 EVRKA 179
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKKAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ GF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 166 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 225
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 226 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 275
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 253 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 312
Query: 274 KP 275
K
Sbjct: 313 KK 314
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 16/158 (10%)
Query: 166 NMPQNGPTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYG 225
N P +G +TP T T P+PS G ++ T ++ + YF+ +G
Sbjct: 8 NSPSSGRSTPVT--------TATGNTSPSPSKLFVGGL-----SWQTSSEKLREYFAMFG 54
Query: 226 EVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPK 285
V D ++MK+ T RSRGFGF+TF + +V V+ HTLDG+ IDPK P++ KP
Sbjct: 55 AVTDVLIMKDPVTQRSRGFGFITFQEAASVDKVLAVPVHTLDGKRIDPKHATPKSAPKPA 114
Query: 286 KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K K+F+GG+ + + ++R +F ++G V + V++
Sbjct: 115 KTK---KIFVGGVGQDTSADEVRAYFAQFGAVEDAVML 149
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T A + YF+++G V D V++ + +T R RGFGFVTF V V HT+ + +
Sbjct: 128 TSADEVRAYFAQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKV 187
Query: 272 DPKPCNPR 279
+ K P+
Sbjct: 188 ECKRAQPK 195
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 15/159 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT--IRAGITRV- 335
KP + + K+F+GG+ + E LR +F YGK+ + I++ R + G V
Sbjct: 88 EESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVT 147
Query: 336 -----PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
P ++ +QK T V++ L R +VQ+
Sbjct: 148 FDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 171 EVRKALSR 178
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|417409049|gb|JAA51051.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 252
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 56 YFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 115
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRTI-RAGITRV-- 335
K K+F+GGL TE ++R +F +G++ + + M P++ R G +
Sbjct: 116 ------KKEPVKKIFVGGLNPEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITF 169
Query: 336 PTQELPVQK 344
+E PV+K
Sbjct: 170 KEEEEPVRK 178
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 151 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 210
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 211 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 265
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 266 TDEEPVKK 273
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 15 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 74
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 75 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 134
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 135 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 184
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 164 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 223
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 224 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 278
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 279 TDEEPVKK 286
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 28 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 87
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 88 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 146
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 147 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 197
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 11 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 52
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F + +V V+ H LDGR IDPK
Sbjct: 231 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDKVLDQKEHRLDGRVIDPKKA--- 287
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 288 ---MAMKKDPVKKIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITF 344
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 345 KEEEPVKK 352
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 16/120 (13%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF R+G+VID VVM+N ETG+ RGFGFVTF + V H LDGR ++ K P+
Sbjct: 27 YFERFGKVIDAVVMRNRETGQPRGFGFVTFEEEGVAQAVASLERHELDGRLVETKVAVPK 86
Query: 280 TLQKPKKNSSFP----------------KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ + P+ N+ +V++ GLP TE DLR FF+R+G + V ++
Sbjct: 87 SAEDPESNTVVDTAQRYGPSGLGEKPSRRVYVSGLPQACTEDDLRAFFSRFGSLEAVRVV 146
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 162 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 221
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 222 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 276
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 277 TDEEPVKK 284
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|395834189|ref|XP_003790094.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Otolemur garnettii]
Length = 363
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 123 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 182
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGKV + I++ R
Sbjct: 183 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDR 241
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG+V ++ + ++G+ RGFGF TF D + V ++ HT++G
Sbjct: 217 TEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHTINGHNA 276
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 277 EVRKALSR 284
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 265 TLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
T + +T++ P +K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 93 TSEAKTLETVPLE----RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 147
>gi|1710623|sp|P51989.1|RO21_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 1;
AltName: Full=hnRNP A2(A)
gi|214741|gb|AAA49948.1| ribonucleoprotein [Xenopus laevis]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G + DCVVM++ + RSRGFGFVTF+ N V + PHT+DG
Sbjct: 17 SFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMATRPHTIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ +
Sbjct: 77 RVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDK 135
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGF FVTF D + V ++ HT++G
Sbjct: 111 TEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|296485782|tpg|DAA27897.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++GE+ DCVV++ + +SRGFGFVTF+ V + PH++DGR +DPK R
Sbjct: 48 YYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAEVDAAMAARPHSIDGRVVDPKRAVSR 107
Query: 280 TLQKPKKNSSF---PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+K +K S K+F+GG+ + E LR +F +YGK+ + I++ R
Sbjct: 108 --EKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDR 155
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
T + + YF +YG++ ++ + ++G+ RGFGFVTF D + V ++ H ++G
Sbjct: 131 TEEHHLREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQKYHAING 187
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|380806927|gb|AFE75339.1| RNA-binding protein Musashi homolog 1, partial [Macaca mulatta]
Length = 216
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 226 EVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPK 285
EV +C+VM++ T RSRGFGFVTF D V V+ H LD +TIDPK PR Q PK
Sbjct: 1 EVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQ-PK 59
Query: 286 KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K+F+GGL N T D++ +F ++GKV + ++M +T
Sbjct: 60 MVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 101
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G+V D ++M + T R RGFGFVTF + V V + H ++ + ++ K
Sbjct: 82 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 141
Query: 278 PRTLQKP 284
P+ + P
Sbjct: 142 PKEVMSP 148
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|148227778|ref|NP_001080390.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Xenopus
laevis]
gi|28302301|gb|AAH46692.1| Hnrpa2b1 protein [Xenopus laevis]
Length = 346
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G + DCVVM++ + RSRGFGFVTF+ N V + PHT+DG
Sbjct: 17 SFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMATRPHTIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ +
Sbjct: 77 RVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDK 135
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGF FVTF D + V ++ HT++G
Sbjct: 111 TEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 19/171 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PHT+DG
Sbjct: 38 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHTIDG 97
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 98 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 156
Query: 328 IRAGITR----------VPTQELPVQKEATA------VQQVLRRSSTTKVQ 362
++G R P ++ +QK T V++ L R +VQ
Sbjct: 157 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQ 206
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 132 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 191
Query: 272 DPKPCNPRTLQKPKKNS 288
+ + R + +NS
Sbjct: 192 EVRKALSRQEMQEVQNS 208
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
++ ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 21 RRRREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 62
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCFEQYGKIEVIEIMTDR 140
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + F +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDCFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +G+V+DCVVM + TGR+RGFGFVT+ D V+ + PH +DGR +DPK PR
Sbjct: 19 YFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAHRPHVVDGREVDPKRAVPR 78
Query: 280 ------------TLQKPKKNS---SFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMS 324
T KP+ S KVF+GGLP T L +F+ +G V E VI+
Sbjct: 79 QEMESSPRSSSATRAKPRSASFTHHVRKVFVGGLPPTATNEMLHRYFSHFGGVEEAVIIH 138
Query: 325 PRTIR 329
+ R
Sbjct: 139 DKQTR 143
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
RYFS +G V + V++ + +T RGFGFVTF DP V+ H G+ ++ K
Sbjct: 122 HRYFSHFGGVEEAVIIHDKQTRTPRGFGFVTFEDPIIADKVVSVHYHEFYGKMVEVKRAE 181
Query: 278 PR 279
P+
Sbjct: 182 PK 183
>gi|58331869|ref|NP_001011094.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
gi|54038494|gb|AAH84487.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ + RSRGFGFVT++ + V + PH +DG
Sbjct: 19 SFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMSARPHKVDG 78
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R +P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 79 RVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDR 137
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++
Sbjct: 113 TEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNC 172
Query: 272 DPKPC 276
+ +
Sbjct: 173 EVRKA 177
>gi|24650422|ref|NP_733172.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|62472991|ref|NP_001014673.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
gi|62473028|ref|NP_001014677.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|158222|gb|AAA99872.1| ribonucleoprotein [Drosophila melanogaster]
gi|23172392|gb|AAN14092.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|61679403|gb|AAX52997.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|61679404|gb|AAX52998.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
Length = 465
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 51 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPR 110
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G V
Sbjct: 111 PERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVE 170
Query: 337 TQELPVQKEATAVQQVLRRSSTTKVQ 362
+ +A +Q + V+
Sbjct: 171 FDDYDAVDKAILKKQHAIKYVHVDVK 196
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE +L+ F+ ++GKV++VV+M
Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVM 64
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 15/159 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT--IRAGITRV- 335
KP + + K+F+GG+ + E LR +F YGK+ + I++ R + G V
Sbjct: 88 EESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVT 147
Query: 336 -----PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
P ++ +QK T V++ L R +VQ+
Sbjct: 148 FDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQEVQS 186
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V + HT++G
Sbjct: 111 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNA 170
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 171 EVRKALSR 178
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 50 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAV 109
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 110 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDR 159
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + K
Sbjct: 141 REYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 198
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++GE++DCVVM++ T RSRGFGFV+++ + V + N PH +DG+T+DPK
Sbjct: 38 REFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEVDEAMANRPHVIDGKTVDPKRAV 97
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ + TE + F +YG +++ I++ +
Sbjct: 98 PREQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGKYGNIIKCEIIADK 147
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+F +YG +I C ++ + TG+ RGF FVTF D + V I H ++ D K
Sbjct: 131 HFGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKCILIKSHMINNARCDVKK 186
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 26/34 (76%)
Query: 290 FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
F K+F+GGL S T+ LR F++++G++++ V+M
Sbjct: 20 FRKMFIGGLTSTTTDETLREFYSKWGELVDCVVM 53
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 182 AGGATGAAPTGPNPSG--PSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETG 239
+G GA N S AGK ++ T + + YF+++GEV+DC + + TG
Sbjct: 54 SGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 113
Query: 240 RSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLP 299
RSRGFGF+ F D ++V V+ H LDGR IDPK K K+F+GGL
Sbjct: 114 RSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGLN 167
Query: 300 SNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVPTQELPVQKEATAVQQVLRRSS 357
TE +R +F ++G++ +E+ I R G + KE V++VL +
Sbjct: 168 PEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITF------KEEDPVKKVLEKKF 221
Query: 358 TT 359
T
Sbjct: 222 HT 223
>gi|389613482|dbj|BAM20085.1| unknown protein, partial [Papilio xuthus]
Length = 58
Score = 92.8 bits (229), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 48/54 (88%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
QRYFSRYG+VIDCVVMKN+E+GRSRGFGFVTFA+P+ V VV+QN PH LDG +
Sbjct: 3 QRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQNGPHQLDGXLV 56
>gi|17738229|ref|NP_524520.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|62472977|ref|NP_001014671.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
gi|62472987|ref|NP_001014672.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|62472997|ref|NP_001014674.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|400927|sp|Q02926.1|RB97D_DROME RecName: Full=Ribonucleoprotein RB97D
gi|158221|gb|AAA99873.1| ribonucleoprotein [Drosophila melanogaster]
gi|7301511|gb|AAF56633.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|61679405|gb|AAX52999.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|61679406|gb|AAX53000.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|61679407|gb|AAX53001.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
Length = 471
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 51 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPR 110
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G V
Sbjct: 111 PERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVE 170
Query: 337 TQELPVQKEATAVQQVLRRSSTTKVQ 362
+ +A +Q + V+
Sbjct: 171 FDDYDAVDKAILKKQHAIKYVHVDVK 196
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE +L+ F+ ++GKV++VV+M
Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVM 64
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|440898654|gb|ELR50102.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Bos grunniens mutus]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 102 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 161
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 162 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 216
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 217 YTDEEPVKK 225
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 22 SFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|291384354|ref|XP_002708769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVLR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 33 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 92
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 93 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 151
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 152 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 202
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 16 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 57
>gi|110738919|dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F +YGE+ D V+M++ TG+ RGFGF+TFADP+ V VI++ H ++G+ ++ K P
Sbjct: 37 KHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDT-HVINGKQVEIKRTIP 95
Query: 279 RTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV-VIMSPRTIRA 330
+ K+ K+F+GG+PS VTE +L+ FF +YG V+E VI T R+
Sbjct: 96 KGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRS 149
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTF 249
+ +F++YG V++ V++++ET RSRGFGFV F
Sbjct: 126 KDFFAKYGNVVEHQVIRDHETNRSRGFGFVIF 157
>gi|432104101|gb|ELK30931.1| Heterogeneous nuclear ribonucleoprotein A/B [Myotis davidii]
Length = 308
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 18 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHKLDGRVIDPKKAMAM 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRV-- 335
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 78 ------KKEPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIDLPMDPKSNKRRGFVFITF 131
Query: 336 PTQELPVQKEATAVQQVLRRSSTTKVQA 363
+E PV+K +++ S +K++A
Sbjct: 132 KEEEEPVKK---VLEKKFHTISGSKIEA 156
>gi|326936051|ref|XP_003214072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like, partial
[Meleagris gallopavo]
Length = 176
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 29 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDG 88
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 89 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDR 147
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVG-VVIQN 261
T + + YF +YG++ +M + +G+ RGF FVTF D ++V +VIQN
Sbjct: 123 TEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQN 173
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
LQ PK+ K+F+GGL T+ LR+ F ++G + + V+M P T R+
Sbjct: 11 LQSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRS 61
>gi|146197795|dbj|BAF57615.1| DAZ-associated protein [Dugesia japonica]
Length = 296
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G+V++ VM ++ TGRSRGFG+V ++D V V+ + H L+G+ IDPKPCN
Sbjct: 34 YFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVM-STKHHLEGKEIDPKPCNVN 92
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ ++ K+F+GG+ E LR FF ++G + E+ +M ++
Sbjct: 93 MKGRSRRQ---LKIFVGGIAPEHNEETLRDFFKQFGNITELTLMKDQS 137
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + + +MK+ R RGF FV F D V +I + T+ + ++ KP P+
Sbjct: 120 FFKQFGNITELTLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIKPMEPQ 179
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 58 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAV 117
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 118 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDR 167
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + K
Sbjct: 149 REYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 206
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 180 PPAG-GATGAAPTGPNPSGPSA-GKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNE 237
PP G G +G G +P P K ++ T + +F ++G + DCVVM++ +
Sbjct: 706 PPVGRGESGLKMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQ 765
Query: 238 TGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQ-KPKKNSSFPKVFLG 296
T RSRGFGFVT++ V + PH +DGR ++PK R KP + + K+F+G
Sbjct: 766 TKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVG 825
Query: 297 GLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
G+ + E +LR +F +YGK+ + +M R
Sbjct: 826 GIKEDTEEYNLRDYFEKYGKIETIEVMEDR 855
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 833 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 892
Query: 274 K 274
K
Sbjct: 893 K 893
>gi|194745069|ref|XP_001955015.1| GF18563 [Drosophila ananassae]
gi|190628052|gb|EDV43576.1| GF18563 [Drosophila ananassae]
Length = 474
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 55 FYGQWGKVVDVVVMRDATTKRSRGFGFITYTKSLMVDKAQENRPHVIDGKTVEAKRALPR 114
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G +
Sbjct: 115 PERESRETNISVKKLFVGGLKDNHDEECLREYFMQFGNVVSVKLLTDKTTGKRRGFAFIE 174
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 175 FDDYDAVDKAILQKQ 189
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIR 329
K+F+GGL TE L+ F+ ++GKV++VV+M T +
Sbjct: 33 EHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDATTK 74
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DG
Sbjct: 87 SFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDG 146
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 147 RVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 205
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 183 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 242
Query: 274 K 274
K
Sbjct: 243 K 243
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 57 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAV 116
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 117 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDR 166
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + K
Sbjct: 148 REYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 205
>gi|302785051|ref|XP_002974297.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
gi|302807955|ref|XP_002985671.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300146580|gb|EFJ13249.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300157895|gb|EFJ24519.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
Length = 187
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 15/122 (12%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF RYGE+ + ++MK+ TGR+RGFGFV+FADP+ + + HT++GR ++ K PR
Sbjct: 25 YFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAADMAVAE-KHTINGRLVEAKKAVPR 83
Query: 280 TLQK--PKKNSSF------------PKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP 325
Q+ P+ + S K+F+GGL S VTE + R +F ++G + + V+M
Sbjct: 84 DEQQTIPRSSISSGGQSPGGGQGRTKKIFVGGLASTVTEEEFRGYFEQFGTISDAVVMYD 143
Query: 326 RT 327
T
Sbjct: 144 HT 145
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G + D VVM ++ T R RGFGF+TF ++V V+ H L + ++ K PR
Sbjct: 128 YFEQFGTISDAVVMYDHTTQRPRGFGFITFDSEDSVEAVLMKSFHELKDKMVEVKRAVPR 187
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
K+F+GG+ TE LR +F RYG++ E +IM R
Sbjct: 7 KLFIGGISWETTEEQLRDYFQRYGEIAETMIMKDR 41
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ + RSRGFGFVT+ + V + PH +DG
Sbjct: 22 SFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R +P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDR 140
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLD 267
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++
Sbjct: 116 TEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVN 171
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 41 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 100
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 101 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 159
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 160 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 210
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 257 VVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGK 316
+ + + P +T++ P +K ++ F K+F+GGL TE LR ++ ++GK
Sbjct: 3 IFMNDKPKVQSKKTLETVPLE----RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGK 58
Query: 317 VMEVVIM 323
+ + V+M
Sbjct: 59 LTDCVVM 65
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 90/154 (58%), Gaps = 20/154 (12%)
Query: 193 PNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKN--------NETG----- 239
PN P+ GK ++ T ++ + YFS +G V D ++MK+ + G
Sbjct: 32 PNGGDPAPGKLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVR 91
Query: 240 --RSRGFGFVTFADPNNVGVVIQNCP-HTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLG 296
RSRGFGF+TFA+P +V V++ CP HTLDG+ IDPK P+ + K+ + K+F+G
Sbjct: 92 LQRSRGFGFITFAEPGSVDKVLK-CPIHTLDGKKIDPKHATPKN--RAKQANRTKKIFVG 148
Query: 297 GLPSNVTETDLRTFFNRYGKVME-VVIMSPRTIR 329
G+ + + +++ +FN++GKV E V++M +T R
Sbjct: 149 GVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKR 182
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V + V++ + +T R RGFGFVTF + + V V + HT+ + ++ K P+
Sbjct: 162 YFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 221
Query: 280 TLQKPKKNSSFPKVFLGGL 298
+P + +V LG L
Sbjct: 222 EAVQPGALALGKRVVLGAL 240
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ + V + PHT+DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
KP + + K+F+GG+ + E LR +F YGK+ + I++ +
Sbjct: 88 EESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDK 135
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ + V + PHT+DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
KP + + K+F+GG+ + E LR +F YGK+ + I++ +
Sbjct: 88 EESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDK 135
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ + V + PHT+DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
KP + + K+F+GG+ + E LR +F YGK+ + I++ +
Sbjct: 88 EESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDK 135
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGFVT+ADP+ V VIQ+ H ++G+ +
Sbjct: 1939 TTAQFV-KHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQD-SHVINGKQV 1996
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+ K P+ + + K+F+GG+P+ VTE + + FF +YG+V+E IM
Sbjct: 1997 EIKRTIPKGAIGARDFKT-KKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIM 2047
Score = 46.2 bits (108), Expect = 0.024, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNV------GVVIQNCPHTLDGRTI 271
+ +F +YGEVI+ +M+++ T RSRGFGF+TF V G ++ ++ +
Sbjct: 2032 KEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAGGQVEIKKA 2091
Query: 272 DPKPCNPRTLQKPKKNSSFP 291
+PK NP + N S P
Sbjct: 2092 EPKKPNPPLPSSKRYNDSRP 2111
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ + V + PHT+DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
KP + + K+F+GG+ + E LR +F YGK+ + I++ +
Sbjct: 88 EESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDK 135
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPC 276
+ +
Sbjct: 171 EVRKA 175
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DG
Sbjct: 43 SFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCALPHKVDG 102
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 103 RVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV DC + + TGRSRGFGF+ F +P +V V++ H LDGR IDPK
Sbjct: 18 YFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLIDPKKAMAM 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 78 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITF 131
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 132 KEEDPVKK 139
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + + V V++ H + G + K
Sbjct: 100 REYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQ 159
Query: 278 PRTL 281
P+ +
Sbjct: 160 PKEV 163
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 48 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRAKA 107
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 108 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 162
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 163 YTDEEPVKK 171
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+G + + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 28 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAV 87
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 88 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDR 137
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + K
Sbjct: 119 REYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 176
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 15/159 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DGR ++PK R
Sbjct: 28 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAR 87
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT--IRAGITRV- 335
KP + + K+F+GG+ + E LR +F YGK+ + I++ R + G V
Sbjct: 88 EESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVT 147
Query: 336 -----PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
P ++ +QK T V++ L R +VQ+
Sbjct: 148 FDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF+ YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 171 EVRKALSR 178
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 25 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDSAMAARPHSIDG 84
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F+ YGK+ + I++ R
Sbjct: 85 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFSEYGKIDTIEIITDR- 143
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 144 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 194
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 172 PTTPAAGGPPAGGATGA----------APTGPNPSGPSAGKPPADYSAYGTYAQYQQRYF 221
P +PA P+G A A P P+ S K ++ T + Y
Sbjct: 12 PQSPARALRPSGAARAAPSLSPSRFSACPLDPSSFPTSGNKMFIGGLSWDTSKKDLTEYL 71
Query: 222 SRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTL 281
SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 72 SRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKG 131
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQ 338
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G + T
Sbjct: 132 KEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 186
Query: 339 ELPVQK 344
E PV+K
Sbjct: 187 EEPVKK 192
>gi|344268345|ref|XP_003406021.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Loxodonta africana]
Length = 348
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DG
Sbjct: 103 SFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDG 162
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 163 RVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 221
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVI 259
YF +YG++ VM++ ++G+ RGF FVTF D + V ++
Sbjct: 205 YFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 244
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 139 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM-- 196
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 197 ----AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 252
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 253 KEEEPVKK 260
>gi|62473005|ref|NP_001014675.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
gi|62473015|ref|NP_001014676.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|25009807|gb|AAN71075.1| AT15526p [Drosophila melanogaster]
gi|61679408|gb|AAX53002.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|61679409|gb|AAX53003.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
Length = 434
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 51 FYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPR 110
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G V
Sbjct: 111 PERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVE 170
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 171 FDDYDAVDKAILKKQ 185
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 288 SSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K+F+GGL TE +L+ F+ ++GKV++VV+M
Sbjct: 29 EHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVM 64
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV DC + + TGRSRGFGF+ F +P +V V++ H LDGR IDPK
Sbjct: 19 YFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLIDPKKAMAM 78
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 79 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITF 132
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 133 KEEDPVKK 140
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + + V V++ H + G + K
Sbjct: 101 REYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQ 160
Query: 278 PRTL 281
P+ +
Sbjct: 161 PKEV 164
>gi|296193572|ref|XP_002744572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Callithrix jacchus]
Length = 256
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 18 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
K K+F+GGL TE +R +F +G++ + + M P+ R G +
Sbjct: 78 ------KKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMHPKLNKRRGFVFITF 131
Query: 338 QELPVQKEATAVQQVLRRSSTTKVQAP 364
+E V+K +++ S KV P
Sbjct: 132 KERSVKK---VLEKSFILSCEIKVAQP 155
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 19 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 78
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 79 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 132
Query: 338 QELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 133 ------KEEEPVKKVLEKKFHT 148
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 101 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 160
Query: 278 PRTL 281
P+ +
Sbjct: 161 PKEV 164
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 73 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 132
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 133 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 186
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 187 KEEEPVKK 194
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
Query: 276 CNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRTIRA-GIT 333
C + +QKP + K+F+GGL + ++ DL+ +F ++G+V++ I M P T R+ G
Sbjct: 44 CTAKVIQKPPR-----KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFG 98
Query: 334 RVPTQELPVQKEATAVQQVL 353
+ + K+A +V++VL
Sbjct: 99 FI------LFKDAASVEKVL 112
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 155 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 214
Query: 278 PRTL 281
P+ +
Sbjct: 215 PKEV 218
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G+V C +M++ +TGRSRGF F+TF DP V V+ H LDG+ IDPK PR
Sbjct: 18 YFSQFGKVDACTIMRD-QTGRSRGFAFLTFEDPAAVNAVMVR-EHYLDGKIIDPKRAIPR 75
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+++ K+F+GGL VT LR +F ++GKV++ +M R
Sbjct: 76 -----QEHHRTQKLFVGGLAPTVTTESLRAYFAQFGKVVDATVMVDR 117
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V+D VM + ++ RS+GFGFVTF D +N+ ++ +DG+ ID K PR
Sbjct: 101 YFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIERLLGLGHLEIDGKMIDVKLAQPR 160
Query: 280 TLQKPKKNS 288
+++S
Sbjct: 161 GAMMAQRDS 169
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 18 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 78 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITF 131
Query: 338 QELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 132 ------KEEEPVKKVLEKKFHT 147
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + ++ + RGF F+TF + V V++ HT+ G + K
Sbjct: 100 REYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 159
Query: 278 PRTL 281
P+ +
Sbjct: 160 PKEV 163
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|302780479|ref|XP_002972014.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
gi|302781554|ref|XP_002972551.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160018|gb|EFJ26637.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160313|gb|EFJ26931.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
Length = 167
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 68/106 (64%), Gaps = 7/106 (6%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF YG+V++ ++MK+ TGR RGFGFV FADP+ V+Q+ H+++G+ ++ K
Sbjct: 23 KEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVADRVVQD-KHSINGKLVEAKKAV 81
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
PR + K+F+GGL NV+E + + +F ++G + ++V+M
Sbjct: 82 PRDEHQN------AKIFVGGLAPNVSEEEFKQYFEQFGNITDIVVM 121
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YF ++G + D VVM ++ T R RGFGF+TF V V+Q H L + ++ K
Sbjct: 106 KQYFEQFGNITDIVVMYDHATQRPRGFGFITFDSEEAVDSVLQKTFHELKDKMVEVKRAV 165
Query: 278 PR 279
P+
Sbjct: 166 PK 167
>gi|332206587|ref|XP_003252377.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 321
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 34 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAISR 93
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP 325
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+
Sbjct: 94 EDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYFEQYGKIEVIEIMTD 140
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF F+TF D ++V +I HT++G
Sbjct: 117 TEEHHLRGYFEQYGKIEVIEIMTDQGSGKKRGFAFLTFDDHDSVDKIIIQKYHTVNGHIC 176
Query: 272 DPKPC 276
+ +
Sbjct: 177 EVRKA 181
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+FS +GE++DCVVMK+ T +SRGFGF+T+ + V +++ PH +DGR ++PK R
Sbjct: 32 HFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAMRSRPHKIDGREVEPKRAVAR 91
Query: 280 TLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
P + K+F+GG+ + +E LR +F++YG + V ++S +
Sbjct: 92 EESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDK 139
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YFS+YG + V+ + +TG+ RGF FVTF D + V ++ HT++
Sbjct: 115 TSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIVGLKYHTINDHKS 174
Query: 272 DPKPCNPR-TLQK 283
+ K P+ LQ+
Sbjct: 175 EVKKAVPKQELQR 187
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 54 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMAARPHKVDGRVVEPKRAV 113
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 114 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 163
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 141 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 200
Query: 274 KP 275
K
Sbjct: 201 KK 202
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T AQ+ ++F +YGE+ D V+MK+ +TG+ RGFGFVT+ADP+ V VIQ+ H ++G+ +
Sbjct: 20 TTAQFI-KHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQDT-HIINGKQV 77
Query: 272 DPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
+ K P+ + K + K+F+GG+P+ VTE + FF ++G+V E IM +
Sbjct: 78 EIKRTIPKGVVGSKDFRT-RKIFVGGIPAVVTEDEFNEFFTQFGEVTEHQIMRDHS 132
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTF 249
+F+++GEV + +M+++ T RSRGFGF+TF
Sbjct: 115 FFTQFGEVTEHQIMRDHSTNRSRGFGFITF 144
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM+ RSRGFGFVT++ V ++ PH +DG
Sbjct: 15 SFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREVDEAMKARPHKVDG 74
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + S K+F+GG+ + E +R +F +YGK+ V IM R+
Sbjct: 75 RVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERS 134
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 220 YFSRYGEVIDCV-VMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
YF +YG+ I+CV +M+ TG+ RGF FVTF D + V ++ HT++ + +
Sbjct: 117 YFEKYGK-IECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRK 172
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|324520993|gb|ADY47759.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 339
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++GE+IDC+VMK+ T RSRGFGFV++ + V + N PH +DG+T+DPK
Sbjct: 33 KEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIVDGKTVDPKRAV 92
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ TE L +F ++G V++ I++ +
Sbjct: 93 PRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDK 142
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + YF ++G VI ++ + TG+ RGF F+TF D + V + H + D K
Sbjct: 121 QMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVK 180
Query: 275 P 275
Sbjct: 181 K 181
>gi|296485784|tpg|DAA27899.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 341
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + ++Y+ ++GE+ DCVV+++ + RSRG GFVTF+ V + PH++DG
Sbjct: 29 SFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQKPK-KNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++P+ PR + + + K+F+GG+ + E LR +F +YGK+ + I++ R
Sbjct: 89 RVLEPRRAIPREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDR 147
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ ++ + ++GR RGFGFVTF D + V ++ H ++G
Sbjct: 123 TEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQKYHAINGHHA 182
Query: 272 DPKPC 276
+ +
Sbjct: 183 EVRKA 187
>gi|350540024|ref|NP_001232117.1| heterogeneous nuclear ribonucleoprotein D-like [Taeniopygia
guttata]
gi|197129483|gb|ACH45981.1| putative heterogeneous nuclear ribonucleoprotein D-like variant 1
[Taeniopygia guttata]
Length = 301
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 48 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRAKA 107
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 108 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNXRRGFCFIT 162
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 163 YTDEEPVKK 171
>gi|426191766|gb|EKV41706.1| hypothetical protein AGABI2DRAFT_80008 [Agaricus bisporus var.
bisporus H97]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 7/107 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++G+V C +M++ GRSR F F+TF DP +V V+ H LDG+ IDPK PR
Sbjct: 18 YFTQFGKVDACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVR-EHVLDGKIIDPKRAIPR 75
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+++ K+F+GGLP +VT +R FF+++GKV++ +M R
Sbjct: 76 -----QEHQRATKLFIGGLPGSVTSESMREFFSQFGKVIDSTVMLDR 117
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 29/36 (80%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
+ +FS++G+VID VM + ETGRS+GFGFV+F + +
Sbjct: 99 REFFSQFGKVIDSTVMLDRETGRSKGFGFVSFENTD 134
>gi|351695029|gb|EHA97947.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Heterocephalus glaber]
Length = 340
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 87 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 146
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 147 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 201
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 202 TDEEPVKK 209
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++G ++DCVVM++ T RSRGFGFV+F+ + V + N PH +DG+T+DPK
Sbjct: 46 KEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANRPHIIDGKTVDPKRAV 105
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ TE + F +YG +++ I++ +
Sbjct: 106 PREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADK 155
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKP 275
+ +F +YG ++ C ++ + TG+ RGF F+TF D + V + H ++ D K
Sbjct: 137 KEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCDVKK 194
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|395327650|gb|EJF60048.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 333
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
++YFS++G+V C +M++ GRSR F F+TF DP +V V+ H LDG+ IDPK
Sbjct: 16 KKYFSQFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVR-EHFLDGKIIDPKRAI 73
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR +++ K+F+GGLP +VT +R +F ++GKV++ +M R
Sbjct: 74 PR-----QEHQRATKLFIGGLPGSVTSESMREYFTQFGKVVDATVMLDR 117
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF+++G+V+D VM + ETGRS+GFGFV+F + NV ++ +DG+ ID K
Sbjct: 99 REYFTQFGKVVDATVMLDRETGRSKGFGFVSFENV-NVEPMLGFGNLQIDGKLIDVKLAQ 157
Query: 278 PRT 280
PR+
Sbjct: 158 PRS 160
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 29 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 88
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 89 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR- 147
Query: 328 IRAGITR----------VPTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
++G R P ++ +QK T V++ L R +VQ+
Sbjct: 148 -QSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 198
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 53
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 210 YGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
Y T +++F ++G+++D VVMK+ +T RSRGFGF+T++ + V PH +DGR
Sbjct: 26 YRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGR 85
Query: 270 TIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++PK PR + +P+ ++ K+F+GGL + E DLR +F YG + V I++ +
Sbjct: 86 VVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLRVYFQGYGNINSVSIVTDK 143
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF YG + ++ + +TG+ RGFGFV F D + V + H + G+ +D K R
Sbjct: 127 YFQGYGNINSVSIVTDKDTGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSR 186
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 57 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 116
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 117 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITF 170
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 171 KEEEPVKK 178
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + V V++ HT+ G + K
Sbjct: 139 REYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 198
Query: 278 PRTL 281
P+ +
Sbjct: 199 PKEV 202
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV DC + + TGRSRGFGF+ F D +V V+++ H LDGR IDPK
Sbjct: 83 YFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEHKEHRLDGRLIDPKKAMAM 142
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL E +R +F +G++ + + M P+T R G +
Sbjct: 143 ------KKDPIKKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITF 196
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 197 KEEDPVKK 204
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR 135
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQEYHTINGHNA 170
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 171 EVRKALSR 178
>gi|148237229|ref|NP_001080689.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus laevis]
gi|28374304|gb|AAH45260.1| Hnrpa1 protein [Xenopus laevis]
Length = 399
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ + RSRGFGFVT++ + V + PH +DG
Sbjct: 22 SFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMTARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R +P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++
Sbjct: 116 TEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
Query: 221 FSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRT 280
FS++GEV DC + + TGRSRGFGF+ F +P+ V V+ H LDGR IDPK
Sbjct: 89 FSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQKEHRLDGRQIDPKKAMAM- 147
Query: 281 LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPTQ 338
K K+F+GGL TE +R +F +G++ + + M P++ R G +
Sbjct: 148 -----KKEPVKKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITF- 201
Query: 339 ELPVQKEATAVQQVLRRS 356
KE AV+++L +
Sbjct: 202 -----KEEEAVKKILEKK 214
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGF T+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ + YF +YGE+ + ++M++ T RSRGFGFVTF+DP V V++ PH LD + I
Sbjct: 89 TTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEKVLEAAPHILDFKKI 148
Query: 272 DPKPCNPRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
DPK PR Q K ++ +VF+GG+ + T +L +F+++GK+ +M ++
Sbjct: 149 DPKLAVPRKSGQNTKISTKTKRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKS 205
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS++G++ C +M + T R RGFGFVTF + V + H L + ++ K P+
Sbjct: 188 YFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKKAVPK 247
Query: 280 TL 281
+
Sbjct: 248 EV 249
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DC+VM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|195450939|ref|XP_002072698.1| GK13742 [Drosophila willistoni]
gi|194168783|gb|EDW83684.1| GK13742 [Drosophila willistoni]
Length = 506
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
++ ++G+V+D VVM++ T RSRGFGF+T+ V +N PH +DG+T++ K PR
Sbjct: 58 FYGQWGKVVDVVVMRDATTKRSRGFGFITYTKSTMVDKAQENRPHVIDGKTVEAKRALPR 117
Query: 280 TLQKPKK-NSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI--RAGITRVP 336
++ ++ N S K+F+GGL N E LR +F ++G V+ V +++ +T R G +
Sbjct: 118 PERESRETNISVKKLFVGGLKDNHDEECLREYFVQFGHVVSVKLLTDKTTGKRRGFAFIE 177
Query: 337 TQELPVQKEATAVQQ 351
+ +A +Q
Sbjct: 178 FDDYDAVDKAILQKQ 192
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF ++G V+ ++ + TG+ RGF F+ F D + V I H++ +D K
Sbjct: 147 REYFVQFGHVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQKQHSIKYVLVDVK--- 203
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSN 301
+++ +K P+ G PSN
Sbjct: 204 -KSIYNLEKKDKLPQ----GAPSN 222
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 274 KPCNPRTLQKPKKNSS-------FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+P +P ++ P + K+F+GGL TE L+ F+ ++GKV++VV+M
Sbjct: 15 EPPSPEVIEVPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDA 74
Query: 327 TIR 329
T +
Sbjct: 75 TTK 77
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G+++D VVMK+ T RSRGFGF+T++ + V + PH +DGR ++PK PR
Sbjct: 46 HFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPR 105
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV-VIMSPRT-IRAGITRVP 336
+ P ++ K+F+G L + E LR +F YG ++++ ++M T + G V
Sbjct: 106 QEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVE 165
Query: 337 TQEL-PVQKEATAVQQVL 353
+ PV K Q L
Sbjct: 166 FDDYDPVDKVVLQKQHQL 183
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF YG ++D ++ + ETG+ RGF FV F D + V V+ H L+G+ +D K P+
Sbjct: 137 YFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL T+ +L+ F ++G++++VV+M PRT R+
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRS 67
>gi|223648642|gb|ACN11079.1| Heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
Length = 301
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y S++GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 49 YLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRDSESVDRVLELKEHKLDGKLIDPKRAKAM 108
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + E ++R +F +G + + + M +T R G V
Sbjct: 109 KGKEPPK-----KVFVGGLSPDTPEEEIREYFGAFGDIDSIELPMDTKTNERRGFCFVTY 163
Query: 337 TQELPVQK 344
+E PVQK
Sbjct: 164 CEETPVQK 171
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|58332392|ref|NP_001011015.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|82234092|sp|Q640A2.1|HNRDL_XENTR RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|52139122|gb|AAH82729.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|89268223|emb|CAJ82429.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 44 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLETKEHKLDGKLIDPKRAKA 103
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL TE ++ +F +G++ + + M +T R G V
Sbjct: 104 LKGKEPPK-----KVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVT 158
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 159 YTGEEPVKK 167
>gi|355687288|gb|EHH25872.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Macaca mulatta]
Length = 309
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 55 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 114
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 115 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 169
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 170 YTDEEPVKK 178
>gi|426344797|ref|XP_004038940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Gorilla gorilla gorilla]
Length = 363
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 227 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 281
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 282 TDEEPVKK 289
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 199 SAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVV 258
AGK ++ T + + YF+++GEV+DC + + TGRSRGFGF+ F D +V V
Sbjct: 66 DAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 125
Query: 259 IQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGL-PSNVTETDLRTFFNRYGKV 317
+ H LDGR IDPK K K+F+GGL P + TE +R +F +G++
Sbjct: 126 LDQKEHRLDGRVIDPKKAMAM------KKDPVKKIFVGGLNPESPTEEKIREYFGEFGEI 179
Query: 318 MEVVI-MSPR-TIRAGITRVP-TQELPVQK 344
+ + M P+ R G + +E PV+K
Sbjct: 180 EAIELPMDPKLNKRRGFVFITFKEEEPVKK 209
>gi|323456730|gb|EGB12596.1| hypothetical protein AURANDRAFT_6078, partial [Aureococcus
anophagefferens]
Length = 151
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
A+ T + + YF ++GE+ID VM+N TG SRGFGFVT+A P V V+ H LDG
Sbjct: 14 AWTTDEEALRHYFGQFGEIIDVAVMRNKATGVSRGFGFVTYARPGCVDAVLGR-DHVLDG 72
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R +D K PR P N K F+GGLPS V + + R +F ++G++ + ++M R
Sbjct: 73 RRVDIKLAVPRDRAPAPLSN----KFFVGGLPSAVADPEFRGYFEQFGQLTDSIVMVDR 127
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
YF ++G++ D +VM + T RSRGFGFVT+ADP
Sbjct: 111 YFEQFGQLTDSIVMVDRGTNRSRGFGFVTYADPE 144
>gi|324505861|gb|ADY42513.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 357
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++GE+IDC+VMK+ T RSRGFGFV++ + V + N PH +DG+T+DPK
Sbjct: 39 KEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIVDGKTVDPKRAV 98
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ TE L +F ++G V++ I++ +
Sbjct: 99 PRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDK 148
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + YF ++G VI ++ + TG+ RGF F+TF D + V + H + D K
Sbjct: 127 QMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVK 186
Query: 275 P 275
Sbjct: 187 K 187
>gi|324504581|gb|ADY41977.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 345
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++GE+IDC+VMK+ T RSRGFGFV++ + V + N PH +DG+T+DPK
Sbjct: 39 KEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIVDGKTVDPKRAV 98
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ TE L +F ++G V++ I++ +
Sbjct: 99 PRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDK 148
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + YF ++G VI ++ + TG+ RGF F+TF D + V + H + D K
Sbjct: 127 QMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVK 186
Query: 275 P 275
Sbjct: 187 K 187
>gi|198428311|ref|XP_002127222.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 359
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG V DCVV+++N GRS+GFGFVTF + + PHTLD RTID K R
Sbjct: 32 YFSKYGNVTDCVVIRDN--GRSKGFGFVTFETEEEADACMDDRPHTLDSRTIDVKRAVSR 89
Query: 280 TL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTIRAGITRVPTQ 338
KP + K+F+GG+ E LR +FN + G R+ +
Sbjct: 90 EESSKPGAHVQVKKIFIGGVKEGCDENALREYFNTF---------------TGNARIESV 134
Query: 339 ELPVQKEAT 347
E+P+ +E T
Sbjct: 135 EIPLDRETT 143
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGF FVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|324510912|gb|ADY44557.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 323
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ ++S++GE+IDC+VMK+ T RSRGFGFV++ + V + N PH +DG+T+DPK
Sbjct: 39 KEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIVDGKTVDPKRAV 98
Query: 278 PRTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR Q+ + N S ++++ G+ TE L +F ++G V++ I++ +
Sbjct: 99 PRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDK 148
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
Q + YF ++G VI ++ + TG+ RGF F+TF D + V + H + D K
Sbjct: 127 QMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVK 186
Query: 275 P 275
Sbjct: 187 K 187
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|390598799|gb|EIN08196.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 485
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 183 GGATGAAPTGPNPSGPSAGKPPADYSAYGTY----AQYQQRYFSRYGEVIDCVVMKNNET 238
GG G G P PS K G + + + YF ++G+V C +M++
Sbjct: 110 GGVGGLHAVGDRPVRPSEMKDEGKMFIGGLHWDTTDEALKSYFEQFGKVDACTIMRD-AN 168
Query: 239 GRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGL 298
GRSR F F+TF DP +V V+ H LDG+ IDPK PRT ++ K+F+GGL
Sbjct: 169 GRSRCFAFLTFEDPASVNAVMVR-EHILDGKIIDPKRAIPRT-----EHQRATKLFIGGL 222
Query: 299 PSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+VT +R FF+++GKV + +M R
Sbjct: 223 AGSVTSESMREFFSQFGKVTDSTVMLDR 250
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 214 AQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
++ + +FS++G+V D VM + ETGRS+GFGF++ D +V ++ +DG+ ID
Sbjct: 228 SESMREFFSQFGKVTDSTVMLDRETGRSKGFGFISLEDV-DVTPILGFGNLEIDGKLIDV 286
Query: 274 KPCNPR 279
K PR
Sbjct: 287 KLAQPR 292
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRAVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|30682550|ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis thaliana]
gi|20260060|gb|AAM13377.1| unknown protein [Arabidopsis thaliana]
gi|332641793|gb|AEE75314.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 231
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
++F +YGE+ D V+M++ TG+ RGFGF+TFADP+ V VI++ H ++G+ ++ K P
Sbjct: 37 KHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDT-HVINGKQVEIKRTIP 95
Query: 279 RTL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVME 319
+ K+ K+F+GG+PS VTE +L+ FF +YG V+E
Sbjct: 96 KGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVE 137
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTF 249
+ +F++YG V++ V++++ET RSRGFGFV F
Sbjct: 126 KDFFAKYGNVVEHQVIRDHETNRSRGFGFVIF 157
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
Y+ R ++S++G V D VVMK+ GRSRGFGFVT+ DP V PH +DG+ +D
Sbjct: 296 DYRLREFYSKFGVVTDAVVMKDI-AGRSRGFGFVTYEDPQMAEVACNARPHEIDGKIVDA 354
Query: 274 KPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
K P+ P + K+F+GGL +V ++DL ++F+ +G+++E V+M
Sbjct: 355 KKAVPKGDAHPIPDIPVRKIFIGGLRRSVKDSDLFSYFSEFGQIVEAVVM 404
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
YFS +G++++ VVM + ET +SRGFGFVTF D ++V V H++ G +D K
Sbjct: 391 YFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTDSVDRVANETLHSICGFPVDVK 445
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 224 YGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR-TLQ 282
+G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R Q
Sbjct: 37 WGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQ 96
Query: 283 KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 97 RPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
+ + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G + +
Sbjct: 119 HHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVR 178
Query: 275 PC 276
Sbjct: 179 KA 180
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + +CVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 19 SFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 78
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 79 RVVEPKRTVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 137
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 113 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 172
Query: 272 DPKPC 276
+ +
Sbjct: 173 EVRKA 177
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 224 YGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR-TLQ 282
+G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R Q
Sbjct: 37 WGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQ 96
Query: 283 KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 97 RPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 215 QYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPK 274
+ + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G + +
Sbjct: 119 HHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVR 178
Query: 275 PC 276
Sbjct: 179 KA 180
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G++ DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 44 REHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAV 103
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R +P + + K+F+GG+ + E LR +F YGK+ + +M R
Sbjct: 104 SREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDR 153
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 131 EYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 190
Query: 274 KP 275
K
Sbjct: 191 KK 192
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
+PK+ K+F+GGL T+ LR F ++GK+ + V+M P+T R+
Sbjct: 18 HEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRS 67
>gi|392575433|gb|EIW68566.1| hypothetical protein TREMEDRAFT_74094 [Tremella mesenterica DSM
1558]
Length = 466
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y S +GE+ C VM++ TGRSRGF F+T+ DP +V V+ H LDG+ IDPK PR
Sbjct: 130 YMSEFGEIDACTVMRD-PTGRSRGFAFLTYVDPASVTKVLGQT-HHLDGKQIDPKRAIPR 187
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++ KVF+GGL + VT LRTF + +G V++ +M R
Sbjct: 188 A-----EHEKTAKVFVGGLAATVTSESLRTFLSTFGGVLDATVMIDR 229
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+ S +G V+D VM + +T RS+GF F TF + + V ++ LDG+ I+ + PR
Sbjct: 213 FLSTFGGVLDATVMIDRDTNRSKGFAFATFENEDGVLKAMEASGSELDGKQIEIRKAQPR 272
>gi|444523821|gb|ELV13633.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 304
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 45 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 104
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 105 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR 163
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGR 269
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 139 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGH 196
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K ++ F K+F+GGL TE LR ++ ++GK+ + V+M
Sbjct: 28 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVM 69
>gi|350580575|ref|XP_003480852.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 349
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y+ ++G++ DCVV+++ RSRGFGFVTF+ V + PH++DG+ +DPK R
Sbjct: 40 YYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDAAMAARPHSVDGKVVDPKRAVAR 99
Query: 280 TL-QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
+KP + + K+F+GG+ + E LR +F +YGK+ + I++ R
Sbjct: 100 EESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDR 147
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 123 TEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHHA 182
Query: 272 DP-KPCNPRTLQKPKKNSS 289
+ K + + +Q+ + ++S
Sbjct: 183 EVGKALSRQEMQEVQSSTS 201
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
+K + N F K+F+GGL S TE LR ++ ++GK+ + V++
Sbjct: 12 RKKRINEQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVL 53
>gi|345316006|ref|XP_001514052.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Ornithorhynchus anatinus]
Length = 280
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPRT-LQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKI 131
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
+Y T + YFS+YG++ DCVV+K++ TGRS+GFGFVTF + + PHTL+
Sbjct: 21 SYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEAEADACMDDRPHTLNS 80
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV 317
R ID K R KP + K+F+GGL ET+L+ +F ++G +
Sbjct: 81 RQIDVKRAVSREESVKPGAHFQVKKIFIGGLKDGCDETNLKEYFGQFGTI 130
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGF FVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G +
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHSC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++GEV DC + + TGRSRGFGF+ F D +V V+++ H LDGR IDPK
Sbjct: 84 YFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEHKEHRLDGRLIDPKKAMAM 143
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL E +R +F +G++ V + M P+T R G +
Sbjct: 144 ------KKEPIKKIFVGGLNPEAGEDKIREYFETFGEIEAVELPMDPKTNKRRGFVFITF 197
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 198 KEEEPVKK 205
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDGAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRT 327
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQ 136
Query: 328 --IRAGITRV------PTQELPVQKEAT------AVQQVLRRSSTTKVQA 363
+ G V P ++ +QK T V++ L R +VQ+
Sbjct: 137 SGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQS 186
>gi|348535413|ref|XP_003455195.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Oreochromis niloticus]
Length = 316
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 170 NGPTTPAAGGPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVID 229
+ P + A GG + + + GK ++ T + + YFS++GEV+D
Sbjct: 25 DDPMSAAGDCGLMGGEAEGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFSKFGEVVD 84
Query: 230 CVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSS 289
C + + TGRSRGFGFV F +P +V V H L+G+ IDPK ++P K
Sbjct: 85 CTLKLDPMTGRSRGFGFVLFKEPESVDKVASQKEHKLNGKVIDPKKAKAMKSKEPVK--- 141
Query: 290 FPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP-TQELPVQK 344
K+F+GGL + E +R +F +G+V V + M +T R G + +E PV+K
Sbjct: 142 --KIFVGGLSPDTPEEKVREYFGAFGEVESVELPMENKTNKRRGFCFITFKEEEPVKK 197
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS+YG V+D +MK+N TGRSRGFGF+TF ++V V++ H LDG+ IDPK PR
Sbjct: 212 YFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVK-TQHILDGKVIDPKRAIPR 270
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
Q K+F+GG+ +V + FF ++G +++ +M
Sbjct: 271 EEQ-----DKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLM 309
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F+++G +ID +M + +TGRSRGFGF+T+ V V QN G+ I+ K
Sbjct: 294 EEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSSEAVDRVCQNKYIDFKGKQIEIKRAA 353
Query: 278 PRTLQKPKKNSSFPKVF 294
PR +QK N P+ F
Sbjct: 354 PRHMQKGANNGRNPRQF 370
>gi|340730016|ref|XP_003403287.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
terrestris]
Length = 169
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF++YG++ + ++MK+ T RSRGFGF+TFADP +V V+ H LDG+ IDPK
Sbjct: 39 REYFTKYGDITEVMIMKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAF 98
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYG 315
PR PK + K+F+GGL + T D++ +F ++G
Sbjct: 99 PRRTH-PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFG 135
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 30 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRAVEPKRAV 89
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 90 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G + +
Sbjct: 117 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEV 176
Query: 274 KP 275
K
Sbjct: 177 KK 178
>gi|449544090|gb|EMD35064.1| hypothetical protein CERSUDRAFT_54325, partial [Ceriporiopsis
subvermispora B]
Length = 144
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YFS +G+V DC ++++ + GRSRGF F+TF DPN+V V+ H LDG++IDPK PR
Sbjct: 30 YFSEFGKVEDCTILRDPD-GRSRGFAFLTFEDPNSVNAVMIR-DHVLDGKSIDPKRAIPR 87
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
++ +N+ + F+GGL + + +R FF+ YGKV++ +M R
Sbjct: 88 --EEHLRNT---RYFVGGLSHSTSSDSMRAFFSSYGKVVDCTVMVDR 129
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFAD 251
++ T + + +FS YG+V+DC VM + +TGRS+GFGFVTF D
Sbjct: 102 SHSTSSDSMRAFFSSYGKVVDCTVMVDRDTGRSKGFGFVTFED 144
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 18 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 77
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
K K+F+GGL TE +R +F +G++ + + M P+ R G +
Sbjct: 78 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF 131
Query: 338 QELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 132 ------KEEEPVKKVLEKKFHT 147
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 30 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVAAALCARPHKVDGRVVEPKRAV 89
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 90 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 117 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 176
Query: 274 KP 275
K
Sbjct: 177 KK 178
>gi|431916162|gb|ELK16414.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Pteropus
alecto]
Length = 425
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 216 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 275
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPRTI 328
++P K KVF+GGL + +E ++ +F +G+ E+ + P+ +
Sbjct: 276 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEC-EIKVAQPKEV 318
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DGR ++PK R
Sbjct: 33 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDGRVVEPKRAVSR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSP 325
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGKIEVIEIMTD 139
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRHYFEQYGKIEVIEIMTDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKV 180
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 52 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 112 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 198
Query: 274 K 274
K
Sbjct: 199 K 199
>gi|403257202|ref|XP_003921219.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 299
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G + DCVVMK+ T RSRGFGF+T+A V + PH +DGR ++PK R
Sbjct: 33 HFEQWGTLTDCVVMKHPNTKRSRGFGFITYATVEEVDAALNAKPHKVDGRVVEPKRAVLR 92
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+ +GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 93 EDSQRPGAHLTVKKISVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D +++ ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFNDHDSMDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|148235805|ref|NP_001079609.1| heterogeneous nuclear ribonucleoprotein D-like-A [Xenopus laevis]
gi|82241529|sp|Q7ZX83.1|HNDLA_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-A;
Short=hnRNP D-like A; Short=hnRNP DL-A
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis]
Length = 293
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 44 EYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLETNEHKLDGKLIDPKRAKA 103
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKV--MEVVIMSPRTIRAGITRVP 336
++P K KVF+GGL TE ++ +F +G++ +E+ I + R G V
Sbjct: 104 LKGKEPPK-----KVFVGGLSPETTEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVT 158
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 159 YTGEEPVKK 167
>gi|213511366|ref|NP_001133116.1| heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
gi|197631983|gb|ACH70715.1| heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
gi|221221618|gb|ACM09470.1| Heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
Length = 283
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y S++GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 49 YLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRDSESVDRVLELKEHKLDGKLIDPKRAKAM 108
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + E ++R +F +G + + + M +T R G V
Sbjct: 109 KGKEPPK-----KVFVGGLSPDTPEEEIREYFGAFGDIDSIELPMDTKTNERRGFCFVTY 163
Query: 337 TQELPVQK 344
+E PVQK
Sbjct: 164 CEETPVQK 171
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G+++D VVMK+ T RSRGFGF+T++ + V + PH +DGR ++PK PR
Sbjct: 46 HFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPR 105
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV-VIMSPRT-IRAGITRVP 336
+ P ++ K+F+G L + E LR +F YG ++++ ++M T + G V
Sbjct: 106 QDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVE 165
Query: 337 TQEL-PVQKEATAVQQVL 353
+ PV K Q L
Sbjct: 166 FDDYDPVDKVVLQKQHQL 183
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF YG ++D ++ + ETG+ RGF FV F D + V V+ H L+G+ +D K P+
Sbjct: 137 YFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL T+ +L+ F ++G++++VV+M PRT R+
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRS 67
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
+F ++G+++D VVMK+ T RSRGFGF+T++ + V + PH +DGR ++PK PR
Sbjct: 46 HFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPR 105
Query: 280 -TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV-VIMSPRT-IRAGITRVP 336
+ P ++ K+F+G L + E LR +F YG ++++ ++M T + G V
Sbjct: 106 QDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVE 165
Query: 337 TQEL-PVQKEATAVQQVL 353
+ PV K Q L
Sbjct: 166 FDDYDPVDKVVLQKQHQL 183
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF YG ++D ++ + ETG+ RGF FV F D + V V+ H L+G+ +D K P+
Sbjct: 137 YFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 292 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM-SPRTIRA 330
K+F+GGL T+ +L+ F ++G++++VV+M PRT R+
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRS 67
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + TGRS+GFGF+ F D +V V+ H LDGR IDPK
Sbjct: 83 YFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 142
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
K K+F+GGL TE +R +F +G++ + + M P+T R G +
Sbjct: 143 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITF 196
Query: 337 TQELPVQK 344
+E PV+K
Sbjct: 197 KEEEPVKK 204
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ YF +GE+ + + +T + RGF F+TF + V V++ HT+ G + K
Sbjct: 165 REYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQ 224
Query: 278 PRTL 281
P+ +
Sbjct: 225 PKEV 228
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 17 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 76
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 77 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR 135
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 111 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 170
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 171 EVRKALSR 178
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT++ V + PH +DG
Sbjct: 23 SFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMDARPHKVDG 82
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP +S+ K+F+GG+ + E LR +F ++GK+ EV IM+ +
Sbjct: 83 RAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEK 141
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T ++ + YF ++G++ + +M + + RGF F+TF D + V ++ HT++G
Sbjct: 117 TDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNC 176
Query: 272 DPKPCNPR 279
+ + R
Sbjct: 177 EVRKALSR 184
>gi|2780748|dbj|BAA24361.1| hnRNP JKTBP [Homo sapiens]
gi|4512255|dbj|BAA75240.1| JKTBP1 [Homo sapiens]
Length = 301
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 47 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 106
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 107 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 161
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 162 YTDEEPVKK 170
>gi|88682985|gb|AAI05387.1| HNRPDL protein [Bos taurus]
Length = 336
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 83 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 142
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP- 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 143 KGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY 197
Query: 337 TQELPVQK 344
T E PV+K
Sbjct: 198 TDEEPVKK 205
>gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens]
Length = 298
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 44 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 103
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 104 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 158
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 159 YTDEEPVKK 167
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 223 RYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR-TL 281
++G + DCVVM++ T RSRGFGFVT+A V + PH +DGR ++PK R
Sbjct: 36 QWGALTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDS 95
Query: 282 QKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+P + + K+F+GG+ + E LR +F +YGK+ + IM+ R
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 140
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|81917948|sp|Q9Z130.1|HNRDL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=JKT41-binding protein
gi|4514631|dbj|BAA75479.1| JKTBP [Mus musculus]
gi|18203892|gb|AAH21374.1| Heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
gi|74196730|dbj|BAE43104.1| unnamed protein product [Mus musculus]
gi|148688362|gb|EDL20309.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Mus
musculus]
Length = 301
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 47 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 106
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 107 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 161
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 162 YTDEEPVKK 170
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++GEV++C+++++ T RSRGFGF+ + + +++ + + H +DG+ ++PK
Sbjct: 20 REHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALLHATHVIDGKQVEPKRSV 79
Query: 278 PRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
PR + K K+F+GGLP N ++ DL+ +F +YG V EV ++ +
Sbjct: 80 PREQTRTK------KIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDK 122
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF +YG V + ++++ ETGR RGFGFV+F P + H ++G+ K P+
Sbjct: 106 YFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKALVTKMHEINGKMAQVKKAEPK 165
Query: 280 T 280
Sbjct: 166 V 166
>gi|349604934|gb|AEQ00343.1| Heteroproteinous nuclear ribonucleoprotein D-like-like protein,
partial [Equus caballus]
Length = 297
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 219 RYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNP 278
Y SR+GEV+DC + + TGRSRGFGFV F D +V V++ H LDG+ IDPK
Sbjct: 43 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 102
Query: 279 RTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVP 336
++P K KVF+GGL + +E ++ +F +G++ + + M +T R G +
Sbjct: 103 LKGKEPPK-----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFIT 157
Query: 337 -TQELPVQK 344
T E PV+K
Sbjct: 158 YTDEEPVKK 166
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 87 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 146
Query: 280 TLQKPKKNSSFPKVFLGGL-PSNVTETDLRTFFNRYGKVMEVVI-MSPR-TIRAGITRVP 336
K K+F+GGL P + TE +R +F +G++ + + M P+ R G +
Sbjct: 147 ------KKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFIT 200
Query: 337 -TQELPVQK 344
+E PV+K
Sbjct: 201 FKEEEPVKK 209
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 79 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 138
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 139 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 188
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 166 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 225
Query: 274 K 274
K
Sbjct: 226 K 226
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 179 GPPAGGATGAAPTGPNPSGPSAGKPPADYSAYGTYAQYQQRYFSRYGEVIDCVVMKNNET 238
G GA + AGK ++ T + + YFS++GEV DC + ++ T
Sbjct: 60 GVTQNGAAEGGQINASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNT 119
Query: 239 GRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPRTLQKPKKNSSFPKVFLGGL 298
GRSRGFGF+ F + +V V++ H LDGR IDPK ++P K K+F+GGL
Sbjct: 120 GRSRGFGFILFKEAGSVDKVLEQKEHRLDGRQIDPKKAMAMK-KEPAK-----KIFVGGL 173
Query: 299 PSNVTETDLRTFFNRYGKVMEV---VIMSPRTIRAGITRVPTQELPVQK 344
TE +R +F +G++ + V + + R I +E V+K
Sbjct: 174 NPEATEETIREYFGTFGEIESIELPVDLKFKKRRGFIFITFKEEATVKK 222
>gi|302672954|ref|XP_003026164.1| hypothetical protein SCHCODRAFT_71292 [Schizophyllum commune H4-8]
gi|300099845|gb|EFI91261.1| hypothetical protein SCHCODRAFT_71292 [Schizophyllum commune H4-8]
Length = 181
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF ++G+V C +M++ GRSR F F+TF DP +V V+ HTLDG+ IDPK PR
Sbjct: 50 YFEQFGKVDACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVK-EHTLDGKIIDPKRAIPR 107
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
Q+ ++ + K+F+GGLP +VT +R FF+++GKV++ +M R
Sbjct: 108 --QEHQRAT---KLFIGGLPGSVTSESMRAFFSQFGKVIDSTVMLDR 149
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 214 AQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPN 253
++ + +FS++G+VID VM + ETGRS+GFGF++F D +
Sbjct: 127 SESMRAFFSQFGKVIDSTVMLDRETGRSKGFGFISFEDTD 166
>gi|109109574|ref|XP_001086021.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Macaca mulatta]
Length = 267
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+ V I PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAINARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+P + + K F+G + + E LR +F++YGK+ + IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIEIMTDR 140
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ RGF FVTF D ++V + HT++G
Sbjct: 116 TEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNC 175
Query: 272 DPKP 275
+ +
Sbjct: 176 EVRK 179
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCNPR 279
YF+++GEV+DC + + TGRSRGFGF+ F D +V V+ H LDGR IDPK
Sbjct: 19 YFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAM 78
Query: 280 TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVI-MSPRT-IRAGITRVPT 337
K K+F+GGL TE +R +F +G++ + + M P+ R G +
Sbjct: 79 ------KKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITF 132
Query: 338 QELPVQKEATAVQQVLRRSSTT 359
KE V++VL + T
Sbjct: 133 ------KEEEPVKKVLEKKFHT 148
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F ++G + DCVVM++ T RSRGFGFVT+A V + PH +DG
Sbjct: 22 SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
Query: 269 RTIDPKPCNPR-TLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R Q+ + + K+F+GG+ + E LR +F +YGK+ IM+ R
Sbjct: 82 RVVEPKRAVSREDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDR 140
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF +YG++ +M + +G+ R F FVTF D + V ++ HT++G
Sbjct: 116 TEEHHLRDYFEQYGKIEVTEIMTDRGSGKKRSFAFVTFDDHDTVDKIVIQKYHTVNGHNC 175
Query: 272 DPKPC 276
+ +
Sbjct: 176 EVRKA 180
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 30 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 89
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 90 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 117 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 176
Query: 274 KP 275
K
Sbjct: 177 KK 178
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 218 QRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDPKPCN 277
+ +F ++G + DCVVM++ +T RSRGFGFVT++ V + PH +DGR ++PK
Sbjct: 30 REHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 89
Query: 278 PRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R KP + + K+F+GG+ + E +LR +F +YGK+ + +M R
Sbjct: 90 SREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 215 QYQQR-YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTIDP 273
+Y R YF +YG++ VM++ ++G+ RGF FVTF D + V ++ HT++G +
Sbjct: 117 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEV 176
Query: 274 KP 275
K
Sbjct: 177 KK 178
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + Y+ ++G++ DCVVM++ + RSRGFGFVTF+ V + PH++DG
Sbjct: 15 SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 74
Query: 269 RTIDPKPCNPRTLQ-KPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMSPR 326
R ++PK R KP + + K+F+GG+ + E LR +F YGK+ + I++ R
Sbjct: 75 RVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDR 133
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 212 TYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDGRTI 271
T + + YF YG++ ++ + ++G+ RGFGFVTF D + V ++ HT++G
Sbjct: 109 TEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNA 168
Query: 272 DPKPC 276
+ +
Sbjct: 169 EVRKA 173
>gi|302771077|ref|XP_002968957.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
gi|302816651|ref|XP_002990004.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300142315|gb|EFJ09017.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300163462|gb|EFJ30073.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
Length = 162
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 209 AYGTYAQYQQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQNCPHTLDG 268
++ T + + +F +YGE+ D V+M++ +G RGFGFVTFAD + V+++ H LDG
Sbjct: 9 SWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRVLRD-KHVLDG 67
Query: 269 RTIDPKPCNPRTLQKPKKNSSFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVVIM 323
RT++ K PR K K+F+GG+P ++TE + + +F+ +G V+E IM
Sbjct: 68 RTVECKRSIPRESMLVVKGPKTKKIFVGGIPPSITEEEFKAYFSSFGNVIEHQIM 122
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 220 YFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPNNVGVVIQN-CPHTLDGRTI 271
YFS +G VI+ +M+++ TGRSRGFGF+ F V V+ + H L G+ +
Sbjct: 109 YFSSFGNVIEHQIMQDHNTGRSRGFGFIVFDSEQTVEDVLSHGRMHELGGKQV 161
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.132 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,873,759,666
Number of Sequences: 23463169
Number of extensions: 427789005
Number of successful extensions: 1925752
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6104
Number of HSP's successfully gapped in prelim test: 38475
Number of HSP's that attempted gapping in prelim test: 1476439
Number of HSP's gapped (non-prelim): 250345
length of query: 388
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 244
effective length of database: 8,980,499,031
effective search space: 2191241763564
effective search space used: 2191241763564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)