Query psy10364
Match_columns 129
No_of_seqs 60 out of 62
Neff 2.2
Searched_HMMs 29240
Date Fri Aug 16 16:01:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10364.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10364hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rpp_A Muscleblind-like protei 99.6 5.2E-16 1.8E-20 108.3 1.8 38 11-50 50-87 (89)
2 3d2n_A Muscleblind-like protei 99.6 7.1E-16 2.4E-20 105.9 2.0 42 11-54 42-83 (83)
3 2e5s_A Otthump00000018578; ZF- 99.3 2.6E-13 8.7E-18 95.2 -1.5 43 10-56 54-96 (98)
4 3d2q_A Muscleblind-like protei 98.9 1.5E-10 5.3E-15 75.7 1.3 30 11-42 41-70 (70)
5 3d2n_A Muscleblind-like protei 97.5 3.1E-05 1.1E-09 52.9 1.7 29 11-39 8-36 (83)
6 2rpp_A Muscleblind-like protei 97.4 4.8E-05 1.6E-09 52.8 1.2 30 11-40 16-45 (89)
7 3d2q_A Muscleblind-like protei 96.5 0.00081 2.8E-08 43.6 1.5 29 11-39 5-33 (70)
8 2e5s_A Otthump00000018578; ZF- 96.2 0.00067 2.3E-08 47.2 -0.1 30 10-39 18-47 (98)
9 2rhk_C Cleavage and polyadenyl 95.2 0.0047 1.6E-07 40.5 0.8 28 11-40 43-71 (72)
10 2d9n_A Cleavage and polyadenyl 94.2 0.01 3.5E-07 38.8 0.5 26 12-39 38-64 (77)
11 2rhk_C Cleavage and polyadenyl 94.2 0.01 3.5E-07 38.9 0.5 25 11-37 15-40 (72)
12 2d9n_A Cleavage and polyadenyl 94.0 0.016 5.5E-07 37.9 1.1 24 12-37 10-34 (77)
13 2cqe_A KIAA1064 protein; CCCH 89.6 0.19 6.4E-06 34.5 2.4 29 12-42 36-66 (98)
14 2cqe_A KIAA1064 protein; CCCH 86.0 0.26 8.8E-06 33.8 1.2 23 12-35 13-35 (98)
15 3u1l_A PRE-mRNA-splicing facto 83.2 0.25 8.7E-06 38.5 0.2 22 12-35 70-92 (240)
16 1m9o_A Tristetraproline; Cys3H 81.6 0.59 2E-05 29.3 1.5 27 12-40 12-40 (77)
17 1v66_A Protein inhibitor of ac 44.4 4.1 0.00014 27.5 -0.3 26 99-124 14-39 (65)
18 3u9g_A Zinc finger CCCH-type a 40.5 8.6 0.00029 30.9 1.0 41 10-52 87-134 (229)
19 4b2v_A S64; toxin, ICK; NMR {S 23.9 15 0.00051 21.8 -0.2 13 17-31 18-30 (32)
20 1jnp_A T-cell leukemia/lymphom 23.2 50 0.0017 24.3 2.5 43 57-102 48-93 (116)
21 3sol_A Type II secretion pathw 21.3 13 0.00045 26.1 -0.9 19 9-27 10-28 (94)
22 4a56_A PULS, pullulanase secre 20.5 14 0.00048 25.9 -0.9 19 9-27 10-28 (93)
No 1
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=99.56 E-value=5.2e-16 Score=108.28 Aligned_cols=38 Identities=47% Similarity=0.763 Sum_probs=36.6
Q ss_pred ccceeehhhcccccCCCCCceecCCChhhHHHHHhhhhhh
Q psy10364 11 TLNYGTFWILGRCNREKPPCKYFHPPQHLKDQLLINGRNH 50 (129)
Q Consensus 11 ~~~~c~d~iKGRC~RekppCKYfHPP~HLk~qL~ingrnh 50 (129)
...+|+||+||+|+|++ |+|+|||.|||+|++|||||+
T Consensus 50 ~~~vC~dflkG~C~r~~--Cky~H~~~hl~~~~~i~g~~~ 87 (89)
T 2rpp_A 50 RVIACFDSLKGRCSREN--CKYLHPPTHLKTQLEINSGPS 87 (89)
T ss_dssp BEEBCHHHHHTCCCCTT--CCSBCCCHHHHHHHHHCSCCC
T ss_pred ceeeehhhhhCcCCCCC--cceecCHHHHHHHHHhcCCCC
Confidence 57999999999999998 999999999999999999997
No 2
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=99.56 E-value=7.1e-16 Score=105.91 Aligned_cols=42 Identities=52% Similarity=0.856 Sum_probs=36.6
Q ss_pred ccceeehhhcccccCCCCCceecCCChhhHHHHHhhhhhhhHHH
Q psy10364 11 TLNYGTFWILGRCNREKPPCKYFHPPQHLKDQLLINGRNHLALK 54 (129)
Q Consensus 11 ~~~~c~d~iKGRC~RekppCKYfHPP~HLk~qL~ingrnh~a~k 54 (129)
...+|+|||||+|.|++ |+|+|||.||+++++|+|++++++|
T Consensus 42 ~~~vC~dflkG~C~r~~--C~y~H~~~~l~~~~~i~g~~~~~~~ 83 (83)
T 3d2n_A 42 RVIACFDSLKGRCSREN--CKYLHPPPHLKTQLEINGRNNLIQQ 83 (83)
T ss_dssp EEECCHHHHTTCCCCSS--CSSCCCCHHHHHHHHHHTTCC----
T ss_pred ceeehhHhhhccccCCC--cceeCChHHHHHHHhcCCCCCcCCC
Confidence 47899999999999998 9999999999999999999999864
No 3
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=2.6e-13 Score=95.19 Aligned_cols=43 Identities=47% Similarity=0.825 Sum_probs=36.9
Q ss_pred cccceeehhhcccccCCCCCceecCCChhhHHHHHhhhhhhhHHHHH
Q psy10364 10 STLNYGTFWILGRCNREKPPCKYFHPPQHLKDQLLINGRNHLALKNA 56 (129)
Q Consensus 10 ~~~~~c~d~iKGRC~RekppCKYfHPP~HLk~qL~ingrnh~a~kna 56 (129)
....+|+|||||+|.|++ |+|+|+|.|||++++|. +++++++|
T Consensus 54 ~~~~vC~~flkG~C~r~~--C~y~H~~~~l~~~~~~~--~~~~~~~~ 96 (98)
T 2e5s_A 54 NTVTVCMDYIKGRCMREK--CKYFHPPAHLQAKIKAA--QHQANQAA 96 (98)
T ss_dssp CEEEBCHHHHHTCCCCTT--CCSBCCCHHHHHHHHHH--HSCCCCCC
T ss_pred CccccchhhccCCCCCCC--cCccCChHHHHHHHHHH--HHHHhHhh
Confidence 457899999999999998 99999999999998876 55666554
No 4
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=98.94 E-value=1.5e-10 Score=75.72 Aligned_cols=30 Identities=57% Similarity=1.121 Sum_probs=27.3
Q ss_pred ccceeehhhcccccCCCCCceecCCChhhHHH
Q psy10364 11 TLNYGTFWILGRCNREKPPCKYFHPPQHLKDQ 42 (129)
Q Consensus 11 ~~~~c~d~iKGRC~RekppCKYfHPP~HLk~q 42 (129)
...+|.|||||+|+|++ |+|+|+|.|||++
T Consensus 41 ~~~vC~~flkG~C~r~~--C~y~H~~~~L~~~ 70 (70)
T 3d2q_A 41 TVTVCMDYIKGRCSREK--CKYFHPPAHLQAK 70 (70)
T ss_dssp EEEBCHHHHTTCCCCTT--CCSBCCCHHHHC-
T ss_pred cceeccccCcCCCCCCC--cCeeCCHHHHhcC
Confidence 46899999999999998 9999999999974
No 5
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=97.51 E-value=3.1e-05 Score=52.87 Aligned_cols=29 Identities=31% Similarity=0.622 Sum_probs=25.5
Q ss_pred ccceeehhhcccccCCCCCceecCCChhh
Q psy10364 11 TLNYGTFWILGRCNREKPPCKYFHPPQHL 39 (129)
Q Consensus 11 ~~~~c~d~iKGRC~RekppCKYfHPP~HL 39 (129)
.+.||-||++|+|+|..+.|+|.|||.++
T Consensus 8 ~~~VCr~FlrG~C~r~d~~C~f~H~~~~~ 36 (83)
T 3d2n_A 8 TLEVCREFQRGTCSRPDTECKFAHPSKSC 36 (83)
T ss_dssp EEEBCTTGGGTCCCSCTTTCSSBCCCTTC
T ss_pred cchhcHHHhcCCCCCCCCCCCCcCCCccc
Confidence 56899999999999995559999999874
No 6
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=97.35 E-value=4.8e-05 Score=52.79 Aligned_cols=30 Identities=33% Similarity=0.713 Sum_probs=26.4
Q ss_pred ccceeehhhcccccCCCCCceecCCChhhH
Q psy10364 11 TLNYGTFWILGRCNREKPPCKYFHPPQHLK 40 (129)
Q Consensus 11 ~~~~c~d~iKGRC~RekppCKYfHPP~HLk 40 (129)
.+.||-||++|+|+|..+.|+|.|||..+.
T Consensus 16 ~~~VCrdFlrG~C~r~d~~CrfsH~~~~~~ 45 (89)
T 2rpp_A 16 TLEVCRQFQRGTCSRSDEECKFAHPPKSCQ 45 (89)
T ss_dssp EECBCHHHHHTCCCCCTTTSSSBCCCSSSC
T ss_pred hhhhchHHhcCCCCCCCCCCCCcCCCcccc
Confidence 477999999999999966699999999853
No 7
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=96.54 E-value=0.00081 Score=43.61 Aligned_cols=29 Identities=28% Similarity=0.615 Sum_probs=24.9
Q ss_pred ccceeehhhcccccCCCCCceecCCChhh
Q psy10364 11 TLNYGTFWILGRCNREKPPCKYFHPPQHL 39 (129)
Q Consensus 11 ~~~~c~d~iKGRC~RekppCKYfHPP~HL 39 (129)
.+.||-||++|.|+|....|+|.||+..+
T Consensus 5 k~~vC~~f~~G~C~rg~~~C~f~H~~~~~ 33 (70)
T 3d2q_A 5 RLEVCREYQRGNCNRGENDCRFAHPADST 33 (70)
T ss_dssp EEEBCHHHHTTCCSSCTTTCSSBCCCTTS
T ss_pred cchhCHHHhcCCCCCCCCCCCCccCcccc
Confidence 56799999999999995459999999754
No 8
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.25 E-value=0.00067 Score=47.22 Aligned_cols=30 Identities=23% Similarity=0.564 Sum_probs=25.2
Q ss_pred cccceeehhhcccccCCCCCceecCCChhh
Q psy10364 10 STLNYGTFWILGRCNREKPPCKYFHPPQHL 39 (129)
Q Consensus 10 ~~~~~c~d~iKGRC~RekppCKYfHPP~HL 39 (129)
..+.||-||++|+|+|....|+|.|||..+
T Consensus 18 ~k~~VCr~FlrG~C~rgd~~C~FsH~~~~~ 47 (98)
T 2e5s_A 18 DKLEVCREFQRGNCARGETDCRFAHPADST 47 (98)
T ss_dssp SEEEBCSHHHHTCCSSHHHHCSSBCCSSCC
T ss_pred hhhhhhHHHhcCcCCCCCCCCCCcCCchhc
Confidence 357799999999999984339999999765
No 9
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=95.25 E-value=0.0047 Score=40.55 Aligned_cols=28 Identities=21% Similarity=0.578 Sum_probs=19.5
Q ss_pred ccceeehhhc-ccccCCCCCceecCCChhhH
Q psy10364 11 TLNYGTFWIL-GRCNREKPPCKYFHPPQHLK 40 (129)
Q Consensus 11 ~~~~c~d~iK-GRC~RekppCKYfHPP~HLk 40 (129)
...+|.+|++ |.|.++. |+|.|.....|
T Consensus 43 ~~~~C~~f~~~G~C~~~~--C~y~H~~p~~k 71 (72)
T 2rhk_C 43 KMSECYFYSKFGECSNKE--CPFLHIDPESK 71 (72)
T ss_dssp SCCBCHHHHHHSCCSBTT--CCSBCCCCC--
T ss_pred cCCcccccCCCCCCCCCC--eeccCCCcccc
Confidence 3457888888 8888866 88888766543
No 10
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.25 E-value=0.01 Score=38.84 Aligned_cols=26 Identities=19% Similarity=0.557 Sum_probs=18.5
Q ss_pred cceeehhhc-ccccCCCCCceecCCChhh
Q psy10364 12 LNYGTFWIL-GRCNREKPPCKYFHPPQHL 39 (129)
Q Consensus 12 ~~~c~d~iK-GRC~RekppCKYfHPP~HL 39 (129)
..+|.+|++ |.|.++. |+|.|.+...
T Consensus 38 ~~~C~~f~~~G~C~~~~--C~f~H~~~~~ 64 (77)
T 2d9n_A 38 MPECYFYSKFGECSNKE--CPFLHIDPES 64 (77)
T ss_dssp SCBCHHHHHTCCCCCSS--CSSBCCCTTS
T ss_pred CCCCcccCCCCccCCCC--eeccCCCccc
Confidence 346778888 8888666 8888876544
No 11
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=94.23 E-value=0.01 Score=38.89 Aligned_cols=25 Identities=20% Similarity=0.733 Sum_probs=21.6
Q ss_pred ccceeehhhcccccC-CCCCceecCCCh
Q psy10364 11 TLNYGTFWILGRCNR-EKPPCKYFHPPQ 37 (129)
Q Consensus 11 ~~~~c~d~iKGRC~R-ekppCKYfHPP~ 37 (129)
...+|-+|++|.|.+ |+ |+|.|++.
T Consensus 15 k~~vCk~fl~G~C~~G~~--C~fsH~~~ 40 (72)
T 2rhk_C 15 KTVVCKHWLRGLCKKGDQ--CEFLHEYD 40 (72)
T ss_dssp CCSBCHHHHTTCCCCGGG--SSSBCSCC
T ss_pred cCeeCHHHhcCCCCCCCC--CCCccccc
Confidence 346899999999999 78 99999963
No 12
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.02 E-value=0.016 Score=37.91 Aligned_cols=24 Identities=21% Similarity=0.762 Sum_probs=21.2
Q ss_pred cceeehhhcccccC-CCCCceecCCCh
Q psy10364 12 LNYGTFWILGRCNR-EKPPCKYFHPPQ 37 (129)
Q Consensus 12 ~~~c~d~iKGRC~R-ekppCKYfHPP~ 37 (129)
..+|-+|++|+|.+ |+ |+|.|.+.
T Consensus 10 ~~~C~~fl~G~C~~G~~--C~fsH~~~ 34 (77)
T 2d9n_A 10 TVVCKHWLRGLCKKGDQ--CEFLHEYD 34 (77)
T ss_dssp TSBCHHHHTTCCSCTTS--SSSBCSCC
T ss_pred ceeCHhHccCcCCCCCC--CCCccccc
Confidence 45899999999999 77 99999875
No 13
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=89.62 E-value=0.19 Score=34.53 Aligned_cols=29 Identities=17% Similarity=0.379 Sum_probs=22.4
Q ss_pred cceeehhh-cccccC-CCCCceecCCChhhHHH
Q psy10364 12 LNYGTFWI-LGRCNR-EKPPCKYFHPPQHLKDQ 42 (129)
Q Consensus 12 ~~~c~d~i-KGRC~R-ekppCKYfHPP~HLk~q 42 (129)
..+|.+|+ +|.|.+ +. |+|.|+|...+.+
T Consensus 36 ~~~C~~f~~~G~C~~G~~--C~f~H~~~~~~~~ 66 (98)
T 2cqe_A 36 DFPCKLYHTTGNCINGDD--CMFSHDPLTEETR 66 (98)
T ss_dssp SSBCSHHHHTSCCSSCTT--CSSBCCCCCHHHH
T ss_pred CCcCcCcccCCcCCCCCC--CcccCCCCcccch
Confidence 35688885 899998 77 9999998765543
No 14
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=86.02 E-value=0.26 Score=33.84 Aligned_cols=23 Identities=35% Similarity=0.795 Sum_probs=19.2
Q ss_pred cceeehhhcccccCCCCCceecCC
Q psy10364 12 LNYGTFWILGRCNREKPPCKYFHP 35 (129)
Q Consensus 12 ~~~c~d~iKGRC~RekppCKYfHP 35 (129)
-.+|-+|++|.|.+-. .|+|.|.
T Consensus 13 ~~lC~~f~~G~C~~G~-~C~f~H~ 35 (98)
T 2cqe_A 13 RELCKFYITGFCARAE-NCPYMHG 35 (98)
T ss_dssp CSBCTTTTTTCCSCST-TCSSBSS
T ss_pred CccCcccccCcCCCCC-CCCCCCC
Confidence 4579999999999742 3999998
No 15
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=83.20 E-value=0.25 Score=38.49 Aligned_cols=22 Identities=36% Similarity=0.801 Sum_probs=19.4
Q ss_pred cceeehhhcccccC-CCCCceecCC
Q psy10364 12 LNYGTFWILGRCNR-EKPPCKYFHP 35 (129)
Q Consensus 12 ~~~c~d~iKGRC~R-ekppCKYfHP 35 (129)
-.+|..|.||-|.| +. |.|+|-
T Consensus 70 ~~~C~ffakG~C~~G~~--C~y~H~ 92 (240)
T 3u1l_A 70 LFFCLFFAKGMCCLGPK--CEYLHH 92 (240)
T ss_dssp CSBCHHHHTTCCSCGGG--CSSBBS
T ss_pred CeEcCccccCCCCCCCC--CCccCC
Confidence 45899999999999 66 999995
No 16
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=81.59 E-value=0.59 Score=29.34 Aligned_cols=27 Identities=26% Similarity=0.543 Sum_probs=22.1
Q ss_pred cceeehhh-cccccC-CCCCceecCCChhhH
Q psy10364 12 LNYGTFWI-LGRCNR-EKPPCKYFHPPQHLK 40 (129)
Q Consensus 12 ~~~c~d~i-KGRC~R-ekppCKYfHPP~HLk 40 (129)
..+|-.|+ .|.|.+ ++ |+|.|...-|+
T Consensus 12 t~~C~~f~~~G~C~~G~~--C~f~H~~~e~~ 40 (77)
T 1m9o_A 12 TELCRTYSESGRCRYGAK--CQFAHGLGELR 40 (77)
T ss_dssp SCCCSGGGGTSCCTTTTT--CSSCSSSCCGG
T ss_pred chhCHHhhhCCCcCCCCC--ccCCCCChhhc
Confidence 35788886 899996 67 99999987765
No 17
>1v66_A Protein inhibitor of activated STAT protein 1; four helix bundle, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=44.43 E-value=4.1 Score=27.52 Aligned_cols=26 Identities=42% Similarity=0.542 Sum_probs=24.1
Q ss_pred eehhhhhhhhhhhhhhHHHHhhhhhc
Q psy10364 99 WRISCLKNLKSFESRNKEERKEELTG 124 (129)
Q Consensus 99 ~~~svlh~~~~~~~~~~~~~~~~~~~ 124 (129)
||.|-|+-+=+|+.|||.-||.||.+
T Consensus 14 fRVsELq~LLg~~gr~KsGrK~eL~~ 39 (65)
T 1v66_A 14 LRVSELQVLLGYAGRNKHGRKHELLT 39 (65)
T ss_dssp CCHHHHHHHHHTTCCCCCSCHHHHHH
T ss_pred HhHHHHHHHHHHcCCCCcCcHHHHHH
Confidence 89999999999999999999999854
No 18
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=40.48 E-value=8.6 Score=30.94 Aligned_cols=41 Identities=29% Similarity=0.463 Sum_probs=26.5
Q ss_pred cccceeehhhcccc-----cCCCCCceecCCC--hhhHHHHHhhhhhhhH
Q psy10364 10 STLNYGTFWILGRC-----NREKPPCKYFHPP--QHLKDQLLINGRNHLA 52 (129)
Q Consensus 10 ~~~~~c~d~iKGRC-----~RekppCKYfHPP--~HLk~qL~ingrnh~a 52 (129)
.+|-.|=.||.|+| .|.. |||-|-= .|=..=|+-+|-.++.
T Consensus 87 ~~LHLCK~~l~G~C~~~~~~~~~--Ck~SHdi~s~~N~~vLk~h~l~~L~ 134 (229)
T 3u9g_A 87 DSLHLCKLNLLGRCHYAQSQRNL--CKYSHDVLSEQNFQILKNHELSGLN 134 (229)
T ss_dssp CSBCCCHHHHTTCCGGGTCCSSC--CSSCSCTTCHHHHHHHHHTTCTTCC
T ss_pred cceeechhhhcCcCCcccCCCCC--cccccccCchhHHHHHHHcCcccCC
Confidence 46777888999999 4566 9999853 2333334445554443
No 19
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=23.85 E-value=15 Score=21.84 Aligned_cols=13 Identities=46% Similarity=1.232 Sum_probs=11.3
Q ss_pred hhhcccccCCCCCce
Q psy10364 17 FWILGRCNREKPPCK 31 (129)
Q Consensus 17 d~iKGRC~RekppCK 31 (129)
||--|||-|+. |+
T Consensus 18 dwccgrcirne--cr 30 (32)
T 4b2v_A 18 DWCCGRCIRNE--CR 30 (32)
T ss_dssp CCCSSEEETTE--EE
T ss_pred chhhhHHHHhh--hc
Confidence 78889999998 86
No 20
>1jnp_A T-cell leukemia/lymphoma protein 1A; beta barrel, dimer, immune system; 2.50A {Mus musculus} SCOP: b.63.1.1
Probab=23.20 E-value=50 Score=24.32 Aligned_cols=43 Identities=33% Similarity=0.619 Sum_probs=30.1
Q ss_pred HHHhcCCCCCCCCccCCccceecccCCCCcccccCCC---cccceeehh
Q psy10364 57 LLQQMGLTPGQPMVPGQIPAVVSAAFYPHWILFPTDD---VASAIWRIS 102 (129)
Q Consensus 57 ~aqqm~~~Pg~pm~~gq~Pa~v~~a~~Ph~~L~P~~n---~aS~~~~~s 102 (129)
.++||..++|.||.+.|-+. ....--|-|.|..- --|.+|+|.
T Consensus 48 ~l~Q~~v~lgep~~ps~l~~---s~LP~mWQLyp~~rYr~sDS~~WrIv 93 (116)
T 1jnp_A 48 ILRQEDVTLGEAMSPSQLVP---YELPLMWQLYPKDRYRSADSMYWQIL 93 (116)
T ss_dssp EEEECCCCCCCCCCSTTTCS---CSSCSCEEECTTSCEEETTSCEEEEE
T ss_pred EEEEccccCCCcCCcccCCC---ccCCceeEecCCCeeecCCCCeEEEE
Confidence 56799999999999988432 22233588999332 457888874
No 21
>3sol_A Type II secretion pathway related protein; general secretory pathway, protein transport, pilotin; 1.90A {Escherichia coli}
Probab=21.31 E-value=13 Score=26.15 Aligned_cols=19 Identities=26% Similarity=0.537 Sum_probs=16.6
Q ss_pred ccccceeehhhcccccCCC
Q psy10364 9 LSTLNYGTFWILGRCNREK 27 (129)
Q Consensus 9 ~~~~~~c~d~iKGRC~Rek 27 (129)
|+.|+-..-|||.+|+|..
T Consensus 10 LA~L~A~~~yLK~~C~~~d 28 (94)
T 3sol_A 10 MASIVSATRYLKMRCNRSD 28 (94)
T ss_dssp HHHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHHHHHHHcCCCCC
Confidence 5677888899999999998
No 22
>4a56_A PULS, pullulanase secretion protein PULS; protein transport, T2SS; 1.24A {Klebsiella oxytoca}
Probab=20.49 E-value=14 Score=25.92 Aligned_cols=19 Identities=26% Similarity=0.676 Sum_probs=16.6
Q ss_pred ccccceeehhhcccccCCC
Q psy10364 9 LSTLNYGTFWILGRCNREK 27 (129)
Q Consensus 9 ~~~~~~c~d~iKGRC~Rek 27 (129)
|+.|+-..-|||..|+|..
T Consensus 10 La~L~A~~~yLK~~C~~~d 28 (93)
T 4a56_A 10 LASVAAGARYLKNKCNRSD 28 (93)
T ss_dssp HHHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHHHHHHHcCCCCC
Confidence 5677888899999999998
Done!