RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10368
(549 letters)
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 381 bits (980), Expect = e-127
Identities = 129/485 (26%), Positives = 226/485 (46%), Gaps = 46/485 (9%)
Query: 73 NNLFFLKGRQWKFQRNKMSTGFTSGFYMTREPVLILNDAELVMQVMLKD-FSQFNDKGFH 131
N L + KG G GFY ++PVL + D +++ V++K+ +S F ++
Sbjct: 27 NILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPF 86
Query: 132 IDNDFDMILNNLFFLKGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQ 191
F + + + + +WK R+ +S FTSGKLK M P I + + +L + ++
Sbjct: 87 GPVGF--MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAET 144
Query: 192 TDNLELNIKSAIEDLF----TDVVCKCILGLDMHSIENPNREYKDIQDATLKPNWRLHVK 247
+ ++D+F DV+ G+++ S+ NP + + L+ ++
Sbjct: 145 GKPVT------LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFF 198
Query: 248 QVL---QFLSPYIDR-KIRITGKHIEDWFYGFAEKNMTFRTE-NKIQRNDFLQTLINIYS 302
+ FL P ++ I + + + ++ ++ R E + R DFLQ +I+
Sbjct: 199 LSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDS-- 256
Query: 303 EQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILD 362
Q++ + S + L A +FI AGYET++ +F + ++A +P++Q++L++EI
Sbjct: 257 -QNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDA 315
Query: 363 VKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLR 422
V Y+ +M YL MV ETLR++P+ R
Sbjct: 316 VLP--NKAPPTYDTVLQMEYLDMV--------------------VNETLRLFPIAMRLER 353
Query: 423 RNIVPYTIPGSDVTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFI 482
I G + + G V+ P+ ALH KYW +P KF PERFS++NKD+I P +
Sbjct: 354 VCKKDVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYT 411
Query: 483 PFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEIVAD 542
PF GPR CIG RFA + MK A+ +L +F + T + +G ++ P++ +V
Sbjct: 412 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGG-LLQPEKPVVLK 470
Query: 543 FVPRK 547
R
Sbjct: 471 VESRD 475
Score = 61.8 bits (151), Expect = 2e-10
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MTREPVLILNDAELVMQVMLKD-FSQFNDKGFHIDTDFDMILNNLFFLKGRQWKFQRNKM 59
++PVL + D +++ V++K+ +S F ++ F + + + + +WK R+ +
Sbjct: 54 DGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF--MKSAISIAEDEEWKRLRSLL 111
Query: 60 STGFTSA 66
S FTS
Sbjct: 112 SPTFTSG 118
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 239 bits (612), Expect = 3e-73
Identities = 88/466 (18%), Positives = 175/466 (37%), Gaps = 60/466 (12%)
Query: 93 GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNNLF------FL 146
G + + +I+ E V + ++ +++N + LF
Sbjct: 24 GPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSEC 81
Query: 147 KGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDL 206
+W QR + F+ L S+ T ++ + + L + ++++ +
Sbjct: 82 NYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQT--PVSMQDMLTYT 139
Query: 207 FTDVVCKCILGLDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFLSPYI------DRK 260
D++ K G++ + + L+ + L+ ++ R+
Sbjct: 140 AMDILAKAAFGMETSMLLGAQKPLSQAVKLMLE-----GITASRNTLAKFLPGKRKQLRE 194
Query: 261 IRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHL 320
+R + + + + ++ + D L ++ A +E GL
Sbjct: 195 VRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKA-----EEGAQDDE--GLL-- 245
Query: 321 AANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKM 380
N F +AG+ETSA F + +++ PEI RL+ E+ +V SK ++ED ++
Sbjct: 246 -DNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRY--LDFEDLGRL 302
Query: 381 TYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVG 440
YLS VL E+ LR+YP R I G V +
Sbjct: 303 QYLSQVLKES--------------------LRLYPPAWGTFRLLEEETLIDG--VRVPGN 340
Query: 441 TYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQ 500
T +L T + Y++DP F+P+RF ++ PF+ G R CIG++FA ++
Sbjct: 341 TPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKP--RFTYFPFSLGHRSCIGQQFAQME 398
Query: 501 MKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEIVADFVPR 546
+K + ++L E + P + + P + ++ PR
Sbjct: 399 VKVVMAKLLQRLEFRLVP---GQRFGLQEQATLKPLDPVLCTLRPR 441
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 230 bits (589), Expect = 2e-69
Identities = 64/489 (13%), Positives = 127/489 (25%), Gaps = 75/489 (15%)
Query: 76 FFLKGRQWKFQRNKMST-GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDN 134
+F +F ++++ T I + ++V + K F D
Sbjct: 48 YFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKK 107
Query: 135 D------------FDMILNNLFFLKGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFI 182
D + + + ++P +
Sbjct: 108 DLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELF 167
Query: 183 NHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNREYKDIQDATLKPNW 242
+ L K + + + + + + + + + G + + I
Sbjct: 168 DSLEK--ELSLKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLIT-------- 217
Query: 243 RLHVKQVLQFLSPYIDRKIRITGKHIEDWF-YGFAEKNMTFRTENKIQRNDFLQTLINIY 301
K VL L P + + + IE+ + F+ +++ + FL++ I
Sbjct: 218 ----KWVLFNLHPLLSIGL---PRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEIL 270
Query: 302 SEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALY-----PEIQERL 356
E + EE + A + M ++ RL
Sbjct: 271 VEADKLGISREEA---------THNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRL 321
Query: 357 RQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPV 416
+EI V K G +KM V+ E LR P
Sbjct: 322 AEEIRSVIK-SNGGELTMGAIEKMELTKSVVYEC--------------------LRFEPP 360
Query: 417 LPIYLRRNIVPYTIPGSD--VTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKD 474
+ R I D + G + K + +F PERF E +
Sbjct: 361 VTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGE 420
Query: 475 SIVPGSFIPF-------NEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFV 527
++ G +QC GK F + + + EI ++
Sbjct: 421 KLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSS 480
Query: 528 VGSMVMVPK 536
V +
Sbjct: 481 VNFSSLRKA 489
Score = 29.5 bits (66), Expect = 3.6
Identities = 9/80 (11%), Positives = 20/80 (25%), Gaps = 12/80 (15%)
Query: 5 PVLILNDAELVMQVMLKDFSQFNDKG-----------FHIDTDFDMILNNLFFL-KGRQW 52
I + ++V + K F D + T+ L +L
Sbjct: 77 GAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPK 136
Query: 53 KFQRNKMSTGFTSADFDMIL 72
+ + + + I
Sbjct: 137 HEKLKNLLFFLLKSSRNRIF 156
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 225 bits (576), Expect = 2e-67
Identities = 81/488 (16%), Positives = 174/488 (35%), Gaps = 57/488 (11%)
Query: 71 ILNNLFFLKGRQWKFQRNKMST-----GFTSGFYMTREPVLILNDAELVMQVMLKDFSQF 125
+ L W + + G +++ E LI++ + + +M +
Sbjct: 55 GIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSS 114
Query: 126 N-DKGFHIDNDFDMILNNLFFLKGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFINH 184
+ +F WK R + L M + + ++
Sbjct: 115 RFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDR 174
Query: 185 LTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNREYKDIQDATLKPNWRL 244
L +++ ++ +++ + + + D L + + + + IQ L
Sbjct: 175 LEEVTNESG--YVDVLTLLRRVMLDTSNTLFLRIPL----DESAIVVKIQGYFDAWQALL 228
Query: 245 HVKQVLQFLSPYIDRKIRITGKHIEDWFYGF-AEKNMTFRTENKIQ-RNDFLQTLINIYS 302
+ +S + +K + K ++D AEK TE K++ DF LI
Sbjct: 229 IKPDIFFKISW-LYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELI---- 283
Query: 303 EQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILD 362
A ++ I ++A +T +++ F L +A +P ++E + +EI
Sbjct: 284 -----LAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQT 338
Query: 363 VKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLR 422
V ++ + +D +K+ + + E+ +R PV+ + +R
Sbjct: 339 VIGERD---IKIDDIQKLKVMENFIYES--------------------MRYQPVVDLVMR 375
Query: 423 RNIVPYTIPGSDVTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFI 482
+ + I G + GT ++ +H +++ P++F E F++ F
Sbjct: 376 KALEDDVIDG--YPVKKGTNIILNIGRMH-RLEFFPKPNEFTLENFAKNVP----YRYFQ 428
Query: 483 PFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKEE---I 539
PF GPR C GK A V MK+ + +L F ++ + + + + P E +
Sbjct: 429 PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNML 488
Query: 540 VADFVPRK 547
F PR
Sbjct: 489 EMIFTPRN 496
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 222 bits (569), Expect = 9e-67
Identities = 68/452 (15%), Positives = 152/452 (33%), Gaps = 53/452 (11%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNN-LFFLKGRQWKFQRN 156
+ + V + + EL + + ++ G ++ ++ + G + QR
Sbjct: 60 IKLGPKTVYAVTNPELT-GALALN-PDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRR 117
Query: 157 KMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCIL 216
+ F + + P + + + + ++ S + V +C+L
Sbjct: 118 TIQPAFRLDAIPAYGPIMEEEAHALTERWQ------PGKTVDATSESFRVAVRVAARCLL 171
Query: 217 GLDMHS--IENPNREYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYG 274
E + + L L +R+ +
Sbjct: 172 RGQYMDERAERLCVALATVFRGMYRRMVVPLG--PLYRLPLPANRRFNDALADLHLLVDE 229
Query: 275 FAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYET 334
+ R + + +D L L+ + + + G + + + + G ET
Sbjct: 230 IIAE----RRASGQKPDDLLTALLEAKDD-------NGDPIGEQEIHDQVVAILTPGSET 278
Query: 335 SALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLT 394
A T + LQ +A +PE +R+R E+ V +ED +K+ + V+ E
Sbjct: 279 IASTIMWLLQALADHPEHADRIRDEVEAVT---GGRPVAFEDVRKLRHTGNVIVEA---- 331
Query: 395 ILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALHYSS 454
+R+ P + + RR + + G + G ++ A+
Sbjct: 332 ----------------MRLRPAVWVLTRRAVAESELGG--YRIPAGADIIYSPYAIQRDP 373
Query: 455 KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEI 514
K + D +FDP+R+ E ++ + PF+ G R+C F+ Q+ + T +
Sbjct: 374 KSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
Query: 515 QKTPRTVEHTEFVVGSMVMVPKEEIVADFVPR 546
++ + V + + P + +V V R
Sbjct: 434 EQVAG---SNDAVRVGITLRPHDLLVR-PVAR 461
Score = 32.3 bits (74), Expect = 0.44
Identities = 8/65 (12%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Query: 1 MTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDTDFDMILNN-LFFLKGRQWKFQRNKM 59
+ + V + + EL + + ++ G ++ ++ + G + QR +
Sbjct: 62 LGPKTVYAVTNPELT-GALALN-PDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTI 119
Query: 60 STGFT 64
F
Sbjct: 120 QPAFR 124
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 216 bits (552), Expect = 2e-64
Identities = 78/446 (17%), Positives = 156/446 (34%), Gaps = 50/446 (11%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNN--LFFLKGRQWKFQR 155
F M + L ++ + + + + + + Q+
Sbjct: 50 FTMVGKTFTYLLGSDAAALLFNSKNEDL-NAEDVYSRLTTPVFGKGVAYDVPNPVFLEQK 108
Query: 156 NKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCI 215
+ +G K I K + + ++ E N+ A+ +L C+
Sbjct: 109 KMLKSGLNIAHFKQHVSIIEKETKEYFESWG------ESGEKNVFEALSELIILTASHCL 162
Query: 216 LGLDMHSIENP-NREYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYG 274
G ++ S N + D L + L + R+ + I+D FY
Sbjct: 163 HGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWL--PLPSF--RRRDRAHREIKDIFYK 218
Query: 275 FAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYET 334
+K R +++ + +D LQTL++ + +A + ++AG T
Sbjct: 219 AIQK----RRQSQEKIDDILQTLLDATYKD-------GRPLTDDEVAGMLIGLLLAGQHT 267
Query: 335 SALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLT 394
S+ T+ + +A +Q++ E V Y+ K + L + ET
Sbjct: 268 SSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP-PLTYDQLKDLNLLDRCIKET---- 322
Query: 395 ILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALHYSS 454
LR+ P + I +R P T+ G T+ G V
Sbjct: 323 ----------------LRLRPPIMIMMRMARTPQTVAG--YTIPPGHQVCVSPTVNQRLK 364
Query: 455 KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEI 514
W + F+P+R+ ++N S +++PF G +CIG+ FA+VQ+K+ +L +E
Sbjct: 365 DSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
Query: 515 QKTPRTVEHTEFVVGSMVMVPKEEIV 540
+ +M+ P+ ++
Sbjct: 425 DLIDGYFPTVNY--TTMIHTPENPVI 448
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 216 bits (551), Expect = 5e-64
Identities = 79/476 (16%), Positives = 160/476 (33%), Gaps = 75/476 (15%)
Query: 97 GFYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNN---LFFLKGRQWKF 153
+ + + D E V + + + + K WK
Sbjct: 50 REKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKK 109
Query: 154 QRNKMSTGFTSGK-LKSMYPTIHKCSTSFINHLTKLSKQTDNLEL--NIKSAIEDLFTDV 210
R ++ + + K+ P + S F++ L + K+ + +I + +
Sbjct: 110 DRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFES 169
Query: 211 VCKCILGLDMHSIENP-NREYKDIQDAT------------LKPN-WRLHVKQVLQFLSPY 256
+ I G +E N E + DA L P+ +RL + +
Sbjct: 170 ITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAA 229
Query: 257 IDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFG 316
D + + + +D+ L + +
Sbjct: 230 WDVIFSKADIYTQ--------NFYWELRQKGSVHHDYRGILYRLL-GDSKMS-------- 272
Query: 317 LRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYED 376
+ AN+ + G +T+++T + L +MA ++Q+ LR E+L + +
Sbjct: 273 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG--DMATM 330
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRR-----NIVPYTIP 431
+ + L + K ETLR++P+ R + Y IP
Sbjct: 331 LQLVPLLKASI--------------K------ETLRLHPISVTLQRYLVNDLVLRDYMIP 370
Query: 432 GSDVTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
T V AL ++ DP FDP R+ ++K +I + F G RQC
Sbjct: 371 -------AKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDK-NITYFRNLGFGWGVRQC 422
Query: 492 IGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEIVADFVPRK 547
+G+R A ++M + +L +F + + + +++++P++ I F P
Sbjct: 423 LGRRIAELEMTIFLINMLENFRV-EIQHLSDVGT--TFNLILMPEKPISFTFWPFN 475
Score = 29.6 bits (67), Expect = 2.6
Identities = 7/67 (10%), Positives = 16/67 (23%), Gaps = 3/67 (4%)
Query: 3 REPVLILNDAELVMQVMLKDFSQFNDKGFHIDTDFDMILNN---LFFLKGRQWKFQRNKM 59
+ + D E V + + + + K WK R +
Sbjct: 55 NVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVAL 114
Query: 60 STGFTSA 66
+ +
Sbjct: 115 NQEVMAP 121
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 213 bits (545), Expect = 3e-63
Identities = 88/464 (18%), Positives = 169/464 (36%), Gaps = 61/464 (13%)
Query: 97 GFYMTREPVLILNDAELVMQVMLKD---FSQFNDKGFHIDNDFDMILNNLFFLKGRQWKF 153
+ + L L+ + + + K + D L L+G++W+
Sbjct: 66 RMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQR 125
Query: 154 QRNKMSTGFTSGK-LKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVC 212
R+ + + I++ F+ + +L + ++ S + + +C
Sbjct: 126 VRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDE-RGRIPDLYSELNKWSFESIC 184
Query: 213 KCILGLDMHSIENP-NREYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDW 271
+ ++ E A +K K ++ + + ++ H W
Sbjct: 185 LVLYEKRFGLLQKETEEEALTFITA-IKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAW 243
Query: 272 --FYGFAEKNMTFRTE--NKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVF 327
+ + + R + ++ DFL + +++ + L A +
Sbjct: 244 DTIFKSVKPCIDNRLQRYSQQPGADFLCDIYQ------------QDHLSKKELYAAVTEL 291
Query: 328 IVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVL 387
+A ET+A + + L ++ P+ Q RL QE+ V + ED + M YL L
Sbjct: 292 QLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQT--PRAEDLRNMPYLKACL 349
Query: 388 DETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRR-----NIVPYTIPGSDVTLDVGTY 442
K E++R+ P +P R + Y +P GT
Sbjct: 350 --------------K------ESMRLTPSVPFTTRTLDKPTVLGEYALP-------KGTV 382
Query: 443 VLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMK 502
+ T L S ++D HKF PER+ ++ K I P + +PF G R CIG+R A +Q+
Sbjct: 383 LTLNTQVLGSSEDNFEDSHKFRPERWLQKEK-KINPFAHLPFGIGKRMCIGRRLAELQLH 441
Query: 503 SAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEIVADFVPR 546
A+C I+ ++I T ++VP E+ F PR
Sbjct: 442 LALCWIIQKYDIVATDNEPVEMLH---LGILVPSRELPIAFRPR 482
Score = 30.0 bits (68), Expect = 2.1
Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Query: 3 REPVLILNDAELVMQVMLKD---FSQFNDKGFHIDTDFDMILNNLFFLKGRQWKFQRNKM 59
+ L L+ + + + K + D L L+G++W+ R+
Sbjct: 71 SFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAF 130
Query: 60 STGFTS 65
Sbjct: 131 QKKLMK 136
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 208 bits (532), Expect = 2e-61
Identities = 78/421 (18%), Positives = 147/421 (34%), Gaps = 45/421 (10%)
Query: 103 EPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNNLF--FLKGRQWKFQRNKMST 160
L+ L+ + + + + D + LF + + WK N +
Sbjct: 47 RVTRYLSSQRLIKEACDESRFDK-NLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLP 105
Query: 161 GFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDM 220
F+ +K + + + + K + + + + + L D + C
Sbjct: 106 SFSQQAMKGYHAMMVDIAVQLVQ---KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRF 162
Query: 221 HSIENPNREY--KDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEK 278
+S + A + +L R+ + K + D
Sbjct: 163 NSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD 222
Query: 279 NMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALT 338
R + Q +D L ++N + E +R I F++AG+ET++
Sbjct: 223 ----RKASGEQSDDLLTHMLNGKDPETGEPLDDEN---IR---YQIITFLIAGHETTSGL 272
Query: 339 TTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEG 398
+F L + P + ++ +E V D Y+ K++ Y+ MVL+E
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLV---DPVPSYKQVKQLKYVGMVLNEA-------- 321
Query: 399 LTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALHYSSKYWK 458
LR++P P + + G + L+ G ++ LH W
Sbjct: 322 ------------LRLWPTAPAFSLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWG 368
Query: 459 -DPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKT 517
D +F PERF EN +I +F PF G R CIG++FA + + +L HF+ +
Sbjct: 369 DDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDH 426
Query: 518 P 518
Sbjct: 427 T 427
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 206 bits (525), Expect = 2e-60
Identities = 64/494 (12%), Positives = 142/494 (28%), Gaps = 76/494 (15%)
Query: 74 NLFFLKGRQWKFQRNKM----STGFTSGFYMTREPVLILNDAELVMQVMLKDFSQF--ND 127
F+ G + ++ R++M ST F + + ++ ++++ + K F
Sbjct: 28 EYFYGTGGRDEYFRSRMQKYQSTVFRANMPPG---PFVSSNPKVIVLLDAKSFPILFDVS 84
Query: 128 KGFHIDNDFDMILNNLFFLKGRQW---------KFQRNK-MSTGFTSGKLKSMYPTIHKC 177
K D + + G + + + K + + P
Sbjct: 85 KVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETT 144
Query: 178 STSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNREYKDIQDAT 237
T L + N + E + + + + I
Sbjct: 145 YTELFEGLEA--ELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWV 202
Query: 238 LKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTL 297
L + FL + R+ ++ + F
Sbjct: 203 LFNLAPTLDLGLPWFLQEPLLHTFRL--------------PAFLIKSTYNKLYDYFQSVA 248
Query: 298 INIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALY-PEIQERL 356
+ + + +E + +F + + L+ + L + +L
Sbjct: 249 TPVMEQAEKLGVPKDEA-----VHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQL 303
Query: 357 RQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPV 416
+EI KS DG E ++M V E+LR+ P
Sbjct: 304 AEEIRGAIKSYGDGNVTLEAIEQMPLTKSV--------------------VYESLRIEPP 343
Query: 417 LPIYLRRNIVPYTIPGSDVTLDV--GTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKD 474
+P + +TI D T +V G + K + P ++ P+RF + +
Sbjct: 344 VPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEA 403
Query: 475 SIVPGSFIPFNEGP---------RQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTE 525
++ ++ GP +QC GK F + + + E+ ++ +
Sbjct: 404 ---LLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPLG 460
Query: 526 FVVGSMVMVPKEEI 539
V ++ + + I
Sbjct: 461 AAV-TLTFLKRASI 473
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 206 bits (525), Expect = 3e-60
Identities = 63/496 (12%), Positives = 150/496 (30%), Gaps = 60/496 (12%)
Query: 73 NNLFFLKGRQWKFQRNKMSTGFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHI 132
L F K R K G + V +L D V+ + ++ + + I
Sbjct: 32 YALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI 91
Query: 133 DNDFDMI-LNNLFFLKGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQ 191
+ + + + + +L+++ ++ + + +
Sbjct: 92 FLMERIFDVQLPHYSPSDEKARMK----LTLLHRELQALTEAMYTNLHAVLLGDATEAGS 147
Query: 192 TDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQ 251
+ E+ + + G++ + ++ + A + +R + + +
Sbjct: 148 GWH-EMGLLDFSYSFLLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPK 206
Query: 252 FLSPYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGS 311
+ + ++ + R + R+ +L++ +
Sbjct: 207 LARGSLSVGDKDHMCSVKSRLWKLLSPA---RLARRAHRSKWLESYL---------LHLE 254
Query: 312 EEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDV-----KKS 366
E A + + + A + L + PE +R E+ + +
Sbjct: 255 EMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPV 314
Query: 367 KEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIV 426
+ + L VL E+LR+ I R +V
Sbjct: 315 SQTTTLPQKVLDSTPVLDSVLS--------------------ESLRLTAAPFI-TREVVV 353
Query: 427 PYTIPGSDV---TLDVGTYVLT-PTVALHYSSKYWKDPHKFDPERFSEENKDS------- 475
+P +D L G +L P ++ + + DP F RF +
Sbjct: 354 DLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKD 413
Query: 476 --IVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEF---VVGS 530
+ +P+ G C+G+ +A +K + +L H +++ VE EF G
Sbjct: 414 GKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGF 473
Query: 531 MVMVPKEEIVADFVPR 546
+M P+ ++ + R
Sbjct: 474 GLMQPEHDVPVRYRIR 489
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 204 bits (520), Expect = 7e-60
Identities = 67/453 (14%), Positives = 144/453 (31%), Gaps = 51/453 (11%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDM---ILNNLFFLKGRQWKFQ 154
F + + V++L+ + D + I + +
Sbjct: 43 FQLAGKQVVLLSGSHANEFFFRA-----GDDDLDQAKAYPFMTPIFGEGVVFDASPERRK 97
Query: 155 RNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKC 214
+ ++K TI I + + E+++ +L C
Sbjct: 98 EMLHNAALRGEQMKGHAATIEDQVRRMI------ADWGEAGEIDLLDFFAELTIYTSSAC 151
Query: 215 ILGLDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYG 274
++G + + + + + L V +L R+ +
Sbjct: 152 LIGKKFR--DQLDGRFAKLYHELERGTDPLAY--VDPYLPIESFRRRDEARNGLVALVAD 207
Query: 275 FAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYET 334
+ +K D L LI + F + + AG+ T
Sbjct: 208 IMNGRIANPPTDK-SDRDMLDVLIAVK------AETGTPRFSADEITGMFISMMFAGHHT 260
Query: 335 SALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLT 394
S+ T ++ L ++ + + + E+ ++ + + + +++ L VL ET
Sbjct: 261 SSGTASWTLIELMRHRDAYAAVIDELDEL--YGDGRSVSFHALRQIPQLENVLKET---- 314
Query: 395 ILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALHYSS 454
LR++P L I +R + + G + G V +
Sbjct: 315 ----------------LRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIP 356
Query: 455 KYWKDPHKFDPERFS-EENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFE 513
+ + DPH F P R+ +D + ++IPF G +C+G FA +Q+K+ +L +E
Sbjct: 357 EDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYE 416
Query: 514 IQKTPRTVEHTEFVVGSMVMVPKEEIVADFVPR 546
+ + E MV+ + + R
Sbjct: 417 F-EMAQPPESYRNDHSKMVVQLAQPAAVRYRRR 448
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 203 bits (518), Expect = 1e-59
Identities = 85/465 (18%), Positives = 148/465 (31%), Gaps = 71/465 (15%)
Query: 81 RQWKFQRNKMST-GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMI 139
F + + G + + V+ ++ A + K+ F + ++
Sbjct: 31 NDGDFGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETF-QATW--PLSTRIL 87
Query: 140 L--NNLFFLKGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLEL 197
L N L G + +R + F L S P + ++ E+
Sbjct: 88 LGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWG------KANEV 141
Query: 198 NIKSAIEDLFTDVVCKCILGLDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFLSPYI 257
+ + DV +G + ++ L + +
Sbjct: 142 IWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFSLPIPL-------PNTLF- 193
Query: 258 DRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGL 317
K + + + R + D L L+ + + L
Sbjct: 194 -GKSQRARALLLAELEKIIKA----RQQQPPSEEDALGILLAARDDN-------NQPLSL 241
Query: 318 RHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDF 377
L I + + AG+ET + F + + +I+ER+RQE ++ S+E E
Sbjct: 242 PELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQE---LTAETL 298
Query: 378 KKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVP-----YTIPG 432
KKM YL VL E LR+ P + R I + P
Sbjct: 299 KKMPYLDQVLQ--------------------EVLRLIPPVGGGFRELIQDCQFQGFHFPK 338
Query: 433 SDVTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEEN-KDSIVPGSFIPFNEGPRQC 491
G V H + DP KFDPERF+ + P + +PF G R+C
Sbjct: 339 -------GWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLREC 391
Query: 492 IGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPK 536
+GK FA ++MK ++ F+ P +V + PK
Sbjct: 392 LGKEFARLEMKLFATRLIQQFDWTLLP---GQNLELVVTPSPRPK 433
Score = 28.8 bits (65), Expect = 4.5
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 4 EPVLILNDAELVMQVMLKDFSQFNDKGFHIDTDFDMILNNLFFLKGRQWKFQRNKMSTGF 63
+ V+ ++ A + K+ F + + T + N L G + +R + F
Sbjct: 54 KNVIFISGALANRFLFTKEQETF-QATWPLSTRILLGPNALATQMGEIHRSRRKILYQAF 112
Query: 64 TS 65
Sbjct: 113 LP 114
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 200 bits (511), Expect = 1e-58
Identities = 70/457 (15%), Positives = 149/457 (32%), Gaps = 56/457 (12%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNN--LFFLKGRQWKFQR 155
+ + V I+ D + L + + + + Q
Sbjct: 43 INIVGKRVTIVGDPHEHSRFFLPRNEVL-SPREVYSF-MVPVFGEGVAYAAPYPRMREQL 100
Query: 156 NKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCI 215
N ++ T K ++ P I F+ + D E+N+ + + C+C+
Sbjct: 101 NFLAEELTIAKFQNFVPAIQHEVRKFMAA----NWDKDEGEINLLEDCSTMIINTACQCL 156
Query: 216 LGLDMHSIENPNREYKDIQD--ATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFY 273
G D+ + R + + ++L P + L + ++
Sbjct: 157 FGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQS--ARCHEARTELQKILS 214
Query: 274 GFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYE 333
+D L L++ L + I + AG
Sbjct: 215 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRD-------GTPMSLHEVCGMIVAAMFAGQH 267
Query: 334 TSALTTTFFLQKMALYPEI--QERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETT 391
TS++TTT+ + + + E LR+EI + +M + E+
Sbjct: 268 TSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNY----NNVMDEMPFAERCARES- 322
Query: 392 YLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALH 451
+R P L + +R+ + + + G + + H
Sbjct: 323 -------------------IRRDPPLLMLMRKVMADVKVGS--YVVPKGDIIACSPLLSH 361
Query: 452 YSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTH 511
+ + + +P ++DPER + G+FI F G +CIG++F +Q+K+ +
Sbjct: 362 HDEEAFPEPRRWDPERDEKV------EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
Query: 512 FEIQKTPRTVEHTEFVVGSMVMVP-KEEIVADFVPRK 547
++ Q V ++ +MV+ P + ++ RK
Sbjct: 416 YDFQLLRDEVPDPDY--HTMVVGPTASQCRVKYIRRK 450
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 196 bits (501), Expect = 1e-56
Identities = 60/477 (12%), Positives = 147/477 (30%), Gaps = 71/477 (14%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNN-LFFLKGRQWKFQRN 156
+ + V + + +V+ F+ K FH + + + G + +
Sbjct: 52 CKLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFHFATSAKAFGHRSIDPMDGNTTENIND 110
Query: 157 KMSTGFTSGKLKSMYPTI-HKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCI 215
L S+ ++ ++ SK + + S + + I
Sbjct: 111 TFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTI 170
Query: 216 LGLDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGF 275
G D+ + + D + + +V L + + T + +
Sbjct: 171 FGRDLTRRDTQKAHILNNLDNFKQFD------KVFPALVAGLPIHMFRTAHNAREKLA-- 222
Query: 276 AEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGL--RHLAANIFVFIVAGYE 333
+Q+ + + LI++ + + A V + A
Sbjct: 223 -----ESLRHENLQKRESISELISLRMFLN------DTLSTFDDLEKAKTHLVVLWASQA 271
Query: 334 TSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGA--------FEYEDFKKMTYLSM 385
+ T + L +M PE + +E+ ++ + + L
Sbjct: 272 NTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDS 331
Query: 386 VLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV--GTYV 443
++ E+ LR+ +R +T+ D + ++ +
Sbjct: 332 IIKES--------------------LRLSSASLN-IRTAKEDFTLHLEDGSYNIRKDDII 370
Query: 444 LTPTVALHYSSKYWKDPHKFDPERFSEENKD---------SIVPGSFIPFNEGPRQCIGK 494
+H + + DP F +R+ +EN + ++PF G C G+
Sbjct: 371 ALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
Query: 495 RFAHVQMKSAICEILTHFEI-----QKTPRTVEHTEFVVGSMVMVPKEEIVADFVPR 546
FA ++K + +L++FE+ Q ++ + +G ++ P +I + +
Sbjct: 431 LFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLG--ILPPLNDIEFKYKFK 485
Score = 30.4 bits (69), Expect = 1.6
Identities = 8/67 (11%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Query: 5 PVLILNDAELVMQVMLKDFSQFNDKGFHIDTDFDMILNN-LFFLKGRQWKFQRNKMSTGF 63
V + + +V+ F+ K FH T + + + G + +
Sbjct: 58 YVHFITNPLSYHKVLCHG-KYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTL 116
Query: 64 TSADFDM 70
+
Sbjct: 117 QGHALNS 123
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 177 bits (450), Expect = 2e-50
Identities = 67/439 (15%), Positives = 124/439 (28%), Gaps = 98/439 (22%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMILNNLFFLKGRQWKFQRNK 157
+ R P+ ++ D E V +L + F + L G WK R
Sbjct: 36 LPLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTGRGLLTDWGESWKEARKA 93
Query: 158 MSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILG 217
+ F ++ + + + +F E ++ + L ++ + + G
Sbjct: 94 LKDPFLPKNVRGYREAMEEEARAFFGEW-------RGEERDLDHEMLALSLRLLGRALFG 146
Query: 218 LDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAE 277
+ + D + L L + + R
Sbjct: 147 KPLS--PSLAEHALKALDRIMAQTRS-----PLALLDLAAEARFR--------------- 184
Query: 278 KNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSAL 337
+ + R + LI + + +VAG+ET A
Sbjct: 185 -----KDRGALYR--EAEALI---------VHPPLSHLPRERALSEAVTLLVAGHETVAS 228
Query: 338 TTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILE 397
T+ ++ P+ Q+R+ +
Sbjct: 229 ALTWSFLLLSHRPDWQKRVAESEEAA--------------------LAAFQ--------- 259
Query: 398 GLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALHYSSKYW 457
E LR+YP I RR P + L GT ++ ++
Sbjct: 260 -----------EALRLYPPAWILTRRLERPLLLGE--DRLPPGTTLVLSPYVTQR--LHF 304
Query: 458 KDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKT 517
D F PERF EE G + PF G R C+G+ FA ++ + F +
Sbjct: 305 PDGEAFRPERFLEERGTP--SGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL 362
Query: 518 PRTVEHTEFVVGSMVMVPK 536
P V+ + + P+
Sbjct: 363 PFPR-----VLAQVTLRPE 376
Score = 34.9 bits (81), Expect = 0.069
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 3 REPVLILNDAELVMQVMLKDFSQFNDKGFHIDTDFDMILNNLFFLKGRQWKFQR 56
R P+ ++ D E V +L + F + L G WK R
Sbjct: 40 RFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTGRGLLTDWGESWKEAR 91
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 166 bits (423), Expect = 2e-46
Identities = 64/478 (13%), Positives = 127/478 (26%), Gaps = 92/478 (19%)
Query: 77 FLKGRQWKFQRNKMSTGFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDF 136
F+K R ++ + + + + AE D Q +
Sbjct: 24 FIKNRTERYNSDLFQARLLG------KNFICMTGAEAAKVFYDTDRFQR--QNALPKRVQ 75
Query: 137 DMIL--NNLFFLKGRQWKFQRNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDN 194
+ N + + G ++ + T K + + + + +
Sbjct: 76 KSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWE------KA 129
Query: 195 LELNIKSAIEDLFTDVVCKCILG-LDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFL 253
E+ + +++ V C L ++ ++ D+ DA R
Sbjct: 130 DEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGAVGPR---------- 179
Query: 254 SPYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEE 313
K R E+W E + L + E
Sbjct: 180 ----HWKGRRARPRAEEWIEVMIEDARAGLLKTT--SGTALHEMAFHTQED-------GS 226
Query: 314 YFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFE 373
R A + + ++ + F + +P+ +E LR
Sbjct: 227 QLDSRMAAIEL-INVLRPIVAISYFLVFSALALHEHPKYKEWLRSG-------------- 271
Query: 374 YEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGS 433
M + E R YP P +
Sbjct: 272 -----NSREREMFVQEV--------------------RRYYPFGPFLGALVKKDFVWNN- 305
Query: 434 DVTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGP----R 489
GT VL ++ + W P +F PERF+E ++ IP G
Sbjct: 306 -CEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREEN---LFDMIPQGGGHAEKGH 361
Query: 490 QCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEIVADFVPRK 547
+C G+ MK+++ ++ E + + + M +P+ V + RK
Sbjct: 362 RCPGEGITIEVMKASLDFLVHQIEYDVPE---QSLHYSLARMPSLPESGFVMSGIRRK 416
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 148 bits (375), Expect = 3e-39
Identities = 59/470 (12%), Positives = 132/470 (28%), Gaps = 89/470 (18%)
Query: 104 PVLILNDAELVMQVMLKDFSQFNDKGFH---IDNDFDMILNNLFFLKGRQWKFQRNKMST 160
+ +L D+ V L D + + + + F+MI + + +R +M
Sbjct: 63 YITVLLDSNCYDAV-LSDVASLDQTSYAQVLMKRIFNMI----LPSHNPESEKKRAEMH- 116
Query: 161 GFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDM 220
F L + ++ + K ++ + + + L + G +
Sbjct: 117 -FQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAEN 175
Query: 221 HSIENPNREYKDIQD-ATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKN 279
++ + Y++ + L P ++ + + + W
Sbjct: 176 NNSAALTQIYEEFRRFDKLLPKLAR------TTVNKEEKQIASAAREKLWKWL------- 222
Query: 280 MTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTT 339
+ K + +L + + + E + + + +
Sbjct: 223 TPSGLDRKPREQSWLGSYVKQLQD---------EGIDAEMQRRAMLLQLWVTQGNAGPAA 273
Query: 340 TFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGL 399
+ + + +PE +R+EI E K VL
Sbjct: 274 FWVMGYLLTHPEALRAVREEI-----QGGKHLRLEERQKNTPVFDSVL------------ 316
Query: 400 TPKNRLIFAETLRMYPVLPI---------YLRRNIVPYTIPGSDVTLDVGTYVLT-PTVA 449
ETLR+ I N Y + G + P ++
Sbjct: 317 --W------ETLRLTAAALITRDVTQDKKICLSNGQEYHLR-------RGDRLCVFPFIS 361
Query: 450 LHYSSKYWKDPHKFDPERFSEENKDS---------IVPGSFIPFNEGPRQCIGKRFAHVQ 500
+ + P F +RF ++ V +P+ C G+ FA
Sbjct: 362 PQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHA 421
Query: 501 MKSAICEILTHFEIQKTPRTVEHTEFV----VGSMVMVPKEEIVADFVPR 546
+K + ILT F++ + V G ++ P ++ + R
Sbjct: 422 IKELVFTILTRFDV-ELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIR 470
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 145 bits (367), Expect = 2e-38
Identities = 66/460 (14%), Positives = 120/460 (26%), Gaps = 105/460 (22%)
Query: 103 EPVLILNDAELVMQVMLKDFSQFNDKGFHIDNDFDMIL--NNLFFLKGRQWKFQRNKMST 160
+ L A+ + +G +L + L G + ++
Sbjct: 43 KKTNCLKGAKAAEIFYDTTRFER--EGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMFMG 100
Query: 161 GFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILG-LD 219
T +++++ + T E+ + + T VC L
Sbjct: 101 LMTPERVRALAQLFEAEWRRAVPGWT------RKGEIVFYDELHEPLTRAVCAWAGVPLP 154
Query: 220 MHSIENPNREYKDIQDATLKP---NWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGF- 275
N E + + DA + R R + ++ W
Sbjct: 155 DDEAGNRAGELRALFDAAGSASPRHLW--------------SRLAR---RRVDAWAKRII 197
Query: 276 AEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETS 335
R + + I + ++H D H+AA V ++
Sbjct: 198 EGI----RAGSIGSGSGTAAYAIAWHRDRH--DDLLSP-----HVAAVELVNVLRPTVAI 246
Query: 336 ALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTI 395
A+ TF + I+ L Q+ Y + + E
Sbjct: 247 AVYITFVAHALQTCSGIRAALVQQ--------------------PDYAELFVQEV----- 281
Query: 396 LEGLTPKNRLIFAETLRMYPVLPIYLRRNIVP-----YTIPGSDVTLDVGTYVLTPTVAL 450
R YP P + R P G V+
Sbjct: 282 ---------------RRFYPFFPAVVARASQDFEWEGMAFPE-------GRQVVLDLYGS 319
Query: 451 HYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGP----RQCIGKRFAHVQMKSAIC 506
++ + W DP +F PERF ++D +FIP G +C G+ MK A
Sbjct: 320 NHDAATWADPQEFRPERFRAWDED---SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAH 376
Query: 507 EILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEIVADFVPR 546
++ + + +PK V V
Sbjct: 377 LLVNAMRYDVPD---QDLSIDFARLPALPKSGFVMRNVHI 413
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 112 bits (282), Expect = 1e-26
Identities = 78/489 (15%), Positives = 159/489 (32%), Gaps = 84/489 (17%)
Query: 94 FTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGF-----HIDNDFDMILNNLFFLKG 148
F + P+++LN + Q +++ S F D+ + M +
Sbjct: 45 FQ--IRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGH----YS 98
Query: 149 RQWKFQR-------NKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKS 201
WK QR T + + + + + + L + S D L+ +
Sbjct: 99 EHWKVQRRAAHSMMRNFFTRQPRSR-QVLEGHVLSEARELVALLVRGS--ADGAFLDPRP 155
Query: 202 AIEDLFTDVVCKCILGLDMHSIENPNREYKDIQDATLKPNWRLHVKQV------LQFLSP 255
+V+ G + + E++++ + + + LQ+ P
Sbjct: 156 LTVVAVANVMSAVCFG---CRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYF-P 211
Query: 256 YIDRKIRITGKHIEDWFYGFAEKNMTFRTE----NKIQRNDFLQT-LINIYSEQHNIDAG 310
R + + + F F E R D + +++ + G
Sbjct: 212 NPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-DMMDAFILSAEKKAAGDSHG 270
Query: 311 SEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDG 370
L ++ A I A +T + + L YP++Q R++ E+ V D
Sbjct: 271 GGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR--DR 328
Query: 371 AFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTI 430
D + Y+ L E +R + VP TI
Sbjct: 329 LPCMGDQPNLPYVLAFL--------------------YEAMRF---------SSFVPVTI 359
Query: 431 PGSDVTLDV---------GTYVLTPTVALHYSSKYWKDPHKFDPERFSEENK--DSIVPG 479
P + T + T V ++++ W +P FDP RF +++ + +
Sbjct: 360 PHA-TTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTS 418
Query: 480 SFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKE-E 538
+ F+ G R+CIG+ + +Q+ I + + + P F G + + PK +
Sbjct: 419 RVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYG-LTIKPKSFK 477
Query: 539 IVADFVPRK 547
+ R+
Sbjct: 478 VNV--TLRE 484
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 111 bits (279), Expect = 3e-26
Identities = 95/482 (19%), Positives = 175/482 (36%), Gaps = 90/482 (18%)
Query: 97 GFYMTREPVLILNDAELVMQVMLKDFSQFNDKGF-----HIDNDFDMILNNLFFLKGRQW 151
+ ++LN ++V + ++ F D+ + ++ + GR W
Sbjct: 52 SLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRY----GRGW 107
Query: 152 KFQRN-KMST--GFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFT 208
R +++ F G+ KS I + + F + + + + + I +A+ +
Sbjct: 108 VDHRRLAVNSFRYFGYGQ-KSFESKILEETKFFNDAIETYKGRPFDFKQLITNAV----S 162
Query: 209 DVVCKCILGLDMHSIENPNR-EYKDIQDATLKPNWRLHVKQV-------------LQFLS 254
++ I G R Y+D + + +V+ + L
Sbjct: 163 NITNLIIFG---------ERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILP 213
Query: 255 PYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEY 314
+++ + D+ EK R Q F+ ++ E
Sbjct: 214 FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQ--HFVDAYLD---EMDQGKNDPSST 268
Query: 315 FGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEY 374
F +L ++ I+AG ET+ + + MALYP IQ ++++EI + +G +
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGP--NGKPSW 326
Query: 375 EDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSD 434
+D KM Y VL E LR NIVP I +
Sbjct: 327 DDKCKMPYTEAVL--------------------HEVLRF---------CNIVPLGIFHA- 356
Query: 435 VTLDV---------GTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFN 485
+ D GT V+T ++H+ KYW+DP F PERF + + + +PF+
Sbjct: 357 TSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFS 416
Query: 486 EGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVMVPKE-EIVADFV 544
G R C+G+ A ++M +L F + V + +G M + P+ I A
Sbjct: 417 LGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLG-MTLQPQPYLICA--E 473
Query: 545 PR 546
R
Sbjct: 474 RR 475
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 110 bits (277), Expect = 5e-26
Identities = 98/512 (19%), Positives = 173/512 (33%), Gaps = 92/512 (17%)
Query: 71 ILNNLFFLKGRQWKFQRNKMST--GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDK 128
L NL + + + +++ G + PV++LN V + ++ D+
Sbjct: 20 GLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADR 79
Query: 129 G----FHIDNDFDMILNNLFFLKGRQWKFQRN-KMST--GFTSGKLKSMYPTIHKCSTSF 181
I G W+ QR +ST GK KS+ + + +
Sbjct: 80 PPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGK-KSLEQWVTEEAACL 138
Query: 182 INHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNR-EYKDIQDATLKP 240
S + + A+ ++V+ G R EY D + L
Sbjct: 139 CAAFANHSGRPFRPNGLLDKAV----SNVIASLTCG---------RRFEYDDPRFLRLLD 185
Query: 241 NWRLHVKQ-------------VLQFLSPYIDRKIRITGKHIEDWFYGFAEKN-MTFRTEN 286
+ +K+ VL + P + K+ K ++ MT+
Sbjct: 186 LAQEGLKEESGFLREVLNAVPVLLHI-PALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQ 244
Query: 287 KIQRNDFLQT-LINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQK 345
+ D + L + + N E F +L + AG T++ T + L
Sbjct: 245 PPR--DLTEAFLAEMEKAKGN----PESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLL 298
Query: 346 MALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRL 405
M L+P++Q R++QEI DV E D M Y + V+
Sbjct: 299 MILHPDVQRRVQQEIDDVIGQ--VRRPEMGDQAHMPYTTAVI------------------ 338
Query: 406 IFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV---------GTYVLTPTVALHYSSKY 456
E R +IVP + + D+ GT ++T ++
Sbjct: 339 --HEVQRF---------GDIVPLGVTHM-TSRDIEVQGFRIPKGTTLITNLSSVLKDEAV 386
Query: 457 WKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQK 516
W+ P +F PE F + + P +F+PF+ G R C+G+ A +++ +L HF
Sbjct: 387 WEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
Query: 517 TPRTVEH-TEFVVGSMVMVPKE-EIVADFVPR 546
V ++ P E+ A VPR
Sbjct: 447 PTGQPRPSHHGVFA-FLVSPSPYELCA--VPR 475
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 109 bits (274), Expect = 1e-25
Identities = 102/512 (19%), Positives = 202/512 (39%), Gaps = 95/512 (18%)
Query: 71 ILNNLFFLKGRQWKFQRNKMS--TGFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDK 128
++ N+ + + +S G Y +P+++L+ E V + ++ +F+ +
Sbjct: 21 VIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGR 80
Query: 129 G-FHIDNDFDMILNN--LFFLKGRQWKFQRN-KMST--GFTSGKLKSMYPTIHKCSTSFI 182
G F + + + F G++WK R + T F GK +S+ + + + +
Sbjct: 81 GIFPL---AERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGK-RSIEDRVQEEARCLV 136
Query: 183 NHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNR-EYKDIQDATLKPN 241
L K + + A +V+C I R +YKD Q L
Sbjct: 137 EELRKTKASPCDPTFILGCAP----CNVICSIIFH---------KRFDYKDQQFLNLMEK 183
Query: 242 WRLHVK-------QVLQFLSPYID------RKIRITGKHIEDWFYGFAEKNMTFRTENKI 288
++K Q+ SP ID K+ ++ + +++ N
Sbjct: 184 LNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNP 243
Query: 289 QRNDFLQT-LINIYSEQHNIDAG-SEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKM 346
Q DF+ L+ + E+HN + + E L + A ++F AG ET++ T + L +
Sbjct: 244 Q--DFIDCFLMKMEKEKHNQPSEFTIES--LENTAVDLFG---AGTETTSTTLRYALLLL 296
Query: 347 ALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLI 406
+PE+ ++++EI V + + +D M Y V+
Sbjct: 297 LKHPEVTAKVQEEIERVIGR--NRSPCMQDRSHMPYTDAVV------------------- 335
Query: 407 FAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV---------GTYVLTPTVALHYSSKYW 457
E R +++P ++P + VT D+ GT +L ++ + +K +
Sbjct: 336 -HEVQRY---------IDLLPTSLPHA-VTCDIKFRNYLIPKGTTILISLTSVLHDNKEF 384
Query: 458 KDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKT 517
+P FDP F +E + F+PF+ G R C+G+ A +++ + IL +F ++
Sbjct: 385 PNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSL 444
Query: 518 --PRTVEHTEFVVGSMVMVPKE-EIVADFVPR 546
P+ ++ T V G VP ++ +P
Sbjct: 445 VDPKNLDTTPVVNG-FASVPPFYQLCF--IPI 473
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 106 bits (268), Expect = 7e-25
Identities = 74/487 (15%), Positives = 158/487 (32%), Gaps = 103/487 (21%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKG-FHIDNDFDMILNN---LFFLK-GRQWK 152
+ + V++LN + + M++ + F + + ++ + WK
Sbjct: 62 LRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS---YKLVSQRCQDISLGDYSLLWK 118
Query: 153 FQRNKMSTGFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFTDVVC 212
+ + G SM P + + + F + + ++ ++C
Sbjct: 119 AHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLT----CSIIC 174
Query: 213 KCILGLDMHSIENPNREYKDIQDATLK-------------------PNWRLH-VKQVLQF 252
G + + + D +K PN L +KQ ++
Sbjct: 175 YLTFG---NKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIEN 231
Query: 253 LSPYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSE 312
+++++R +H E + + D ++ Q + +
Sbjct: 232 RDHMVEKQLR---RHKESM------------VAGQWR--DMTDYMLQGVGRQRVEEGPGQ 274
Query: 313 EYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDV-KKSKEDGA 371
H+ ++ + G ET+A T ++ + + +PEIQ RL++E+
Sbjct: 275 --LLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSR 332
Query: 372 FEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIP 431
Y+D ++ L+ + AE LR+ R +VP +P
Sbjct: 333 VTYKDRARLPLLNATI--------------------AEVLRL---------RPVVPLALP 363
Query: 432 GSDVTLDV---------GTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFI 482
T G V+ H W+ PH+F P+RF E + S +
Sbjct: 364 HR-TTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGAN----PSAL 418
Query: 483 PFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTP--RTVEHTEFVVGSMVMVPKE-EI 539
F G R C+G+ A +++ + +L F + P + + + ++
Sbjct: 419 AFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQV 478
Query: 540 VADFVPR 546
PR
Sbjct: 479 RL--QPR 483
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 106 bits (267), Expect = 1e-24
Identities = 81/430 (18%), Positives = 148/430 (34%), Gaps = 85/430 (19%)
Query: 98 FYMTREPVLILNDAELVMQVMLKDFSQFNDKG-FHIDNDFDMILNN---LFFLK-GRQWK 152
M + +I+ +L +V++K F+ + D+ NN + F G W+
Sbjct: 48 VRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT---LDIASNNRKGIAFADSGAHWQ 104
Query: 153 FQRNK--MST--GFTSGKLKSMYPTIHKCSTSFINHLTKLSKQTDNLELNIKSAIEDLFT 208
R + M+T F G + + I + ++ + L + Q+ ++ + A+ T
Sbjct: 105 LHR-RLAMATFALFKDGD-QKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAV----T 158
Query: 209 DVVCKCILGLDMHSIENPNR-EYKD--------IQDATLKPNWRLHVKQV---LQFLSPY 256
+V+ + D + + + + + L+
Sbjct: 159 NVISLICFN---------TSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNK 209
Query: 257 IDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSE---E 313
K++ K D E + I + L TL+ N +AG + E
Sbjct: 210 TLEKLKSHVKIRNDLLNKILENYKEKFRSDSIT--NMLDTLMQAKMNSDNGNAGPDQDSE 267
Query: 314 YFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFE 373
H+ I AG ET+ + L + P+++++L +EI
Sbjct: 268 LLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGF--SRTPT 325
Query: 374 YEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIP-- 431
D ++ L + E LR+ R + P IP
Sbjct: 326 ISDRNRLLLLEATI--------------------REVLRL---------RPVAPMLIPHK 356
Query: 432 -GSDVTLD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIV--PGSFIP 483
D ++ GT V+ ALH++ K W P +F PERF ++ S++P
Sbjct: 357 ANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLP 416
Query: 484 FNEGPRQCIG 493
F GPR CIG
Sbjct: 417 FGAGPRSCIG 426
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 106 bits (266), Expect = 1e-24
Identities = 101/516 (19%), Positives = 194/516 (37%), Gaps = 104/516 (20%)
Query: 71 ILNNLFFLKGRQWKFQRNKMST--GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDK 128
I+ NLF L+ + +++ G Y+ + +++++ + V + +L +F+ +
Sbjct: 20 IIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGR 79
Query: 129 G----FHIDNDFDMILNNLFFLKGRQWKFQRN-KMST--GFTSGKLKSMYPTIHKCSTSF 181
G FH D +I NN G WK R ++T + GK + I + +
Sbjct: 80 GDLPAFHAHRDRGIIFNN-----GPTWKDIRRFSLTTLRNYGMGK-QGNESRIQREAHFL 133
Query: 182 INHLTK-------LSKQTDNLELNIKSAIEDLF------TDVVCKCILGLDMHSIENPNR 228
+ L K + N+ + I LF D ++ L + +
Sbjct: 134 LEALRKTQGQPFDPTFLIGCAPCNVIADI--LFRKHFDYNDEKFLRLMYLFNENFHLLST 191
Query: 229 EYKDIQDA---TLK--PNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKNMTFR 283
+ + + L P V + + + Y+ +++ +H +
Sbjct: 192 PWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVK---EHHQSL------------ 236
Query: 284 TENKIQRNDFLQT-LINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFF 342
N + D L+ + E+H+ +E + + + + AG ET++ T +
Sbjct: 237 DPNCPR--DLTDCLLVEMEKEKHS----AERLYTMDGITVTVADLFFAGTETTSTTLRYG 290
Query: 343 LQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPK 402
L + YPEI+E+L +EI V +D ++M Y+ V+
Sbjct: 291 LLILMKYPEIEEKLHEEIDRVIGP--SRIPAIKDRQEMPYMDAVV--------------- 333
Query: 403 NRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV---------GTYVLTPTVALHYS 453
E R +VP +P T D GT V+ ++ Y
Sbjct: 334 -----HEIQRF---------ITLVPSNLPHE-ATRDTIFRGYLIPKGTVVVPTLDSVLYD 378
Query: 454 SKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFE 513
++ + DP KF PE F EN F PF+ G R C G+ A +++ +C IL HF
Sbjct: 379 NQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFN 438
Query: 514 IQKT--PRTVEHTEFVVGSMVMVPKE-EIVADFVPR 546
++ P+ ++ + +G +P ++ +PR
Sbjct: 439 LKPLVDPKDIDLSPIHIG-FGCIPPRYKLCV--IPR 471
Score = 29.0 bits (66), Expect = 4.0
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 1 MTREPVLILNDAELVMQVMLKDFSQFNDKG----FHIDTDFDMILNNLFFLKGRQWKFQR 56
+ + +++++ + V + +L +F+ +G FH D +I NN G WK R
Sbjct: 51 VGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNN-----GPTWKDIR 105
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 105 bits (264), Expect = 2e-24
Identities = 99/511 (19%), Positives = 187/511 (36%), Gaps = 93/511 (18%)
Query: 71 ILNNLFFLKGRQWKFQRNKMST--GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDK 128
+L NL + + ++ G Y+ PV++L + + + ++ F+ +
Sbjct: 20 VLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR 79
Query: 129 G-FHIDNDFDMILNN--LFFLKGRQWKFQRN-KMST--GFTSGKLKSMYPTIHKCSTSFI 182
G + D I + F G +W+ R ++T F GK +S+ I + + +
Sbjct: 80 GKIAV---VDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGK-RSVEERIQEEARCLV 135
Query: 183 NHLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILGLDMHSIENPNR-EYKDIQDATLKPN 241
L K + L S ++++C + G R +YKD L
Sbjct: 136 EELRKSKGALLDNTLLFHSIT----SNIICSIVFG---------KRFDYKDPVFLRLLDL 182
Query: 242 WRLHVK-------QVLQFLSPYID------RKIRITGKHIEDWFYGFAEKNMTFRTENKI 288
+ QV + S ++ R+I + I + EK+ +
Sbjct: 183 FFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 289 QRNDFLQT-LINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMA 347
+ DF+ L+ + ++ + F ++L + AG ET++ T + M
Sbjct: 243 R--DFIDVYLLRMEKDKSD----PSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 348 LYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIF 407
YP + ER+++EI V S +D KM Y V+
Sbjct: 297 KYPHVTERVQKEIEQVIGS--HRPPALDDRAKMPYTDAVI-------------------- 334
Query: 408 AETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV---------GTYVLTPTVALHYSSKYWK 458
E R+ +++P+ +P + VT D T V + + +Y++
Sbjct: 335 HEIQRL---------GDLIPFGVPHT-VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFE 384
Query: 459 DPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQ--K 516
P+ F+P F + N F+PF+ G R C+G+ A ++ IL +F I
Sbjct: 385 TPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPV 444
Query: 517 TPRTVEHTEFVVGSMVMVPKE-EIVADFVPR 546
P ++ T G + VP +I + R
Sbjct: 445 PPEDIDLTPRESG-VGNVPPSYQIRF--LAR 472
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 104 bits (261), Expect = 4e-24
Identities = 89/514 (17%), Positives = 188/514 (36%), Gaps = 99/514 (19%)
Query: 71 ILNNLFFLKGRQWKFQRNKMST--GFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDK 128
+ N L Q K+S G ++ V++L + V + ++ +F+ +
Sbjct: 20 FIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
Query: 129 G-FHIDNDFDMILNN--LFFLKGRQWKFQRN-KMST--GFTSGKLKSMYPTIHKCSTSFI 182
G FD + + F G + K R ++T F GK + + I + + I
Sbjct: 80 GEQAT---FDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK-RGIEERIQEEAGFLI 135
Query: 183 NHLTK-------LSKQTDNLELNIKSAIEDLF------TDVVCKCILGLDMHSIENPNRE 229
+ L + N+ S+I +F D +L + + + +
Sbjct: 136 DALRGTGGANIDPTFFLSRTVSNVISSI--VFGDRFDYKDKEFLSLLRMMLGIFQFTSTS 193
Query: 230 YKDIQDA---TLK--PNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKNMTFRT 284
+ + +K P + Q+LQ L +I +K+ +
Sbjct: 194 TGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE---HNQRTL------------D 238
Query: 285 ENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQ 344
N + DF+ + + I ++ + +E F L++L + G ET + T +
Sbjct: 239 PNSPR--DFIDSFL-IRMQEEEKNPNTE--FYLKNLVMTTLNLFIGGTETVSTTLRYGFL 293
Query: 345 KMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNR 404
+ +PE++ ++ +EI V + ++ED KM Y+ V+
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDRAKMPYMEAVI----------------- 334
Query: 405 LIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV---------GTYVLTPTVALHYSSK 455
E R +++P ++ V D GT V ++
Sbjct: 335 ---HEIQRF---------GDVIPMSLARR-VKKDTKFRDFFLPKGTEVYPMLGSVLRDPS 381
Query: 456 YWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQ 515
++ +P F+P+ F E +F+PF+ G R C G+ A +++ ++ +F ++
Sbjct: 382 FFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
Query: 516 KT--PRTVEHTEFVVGSMVMVPKE-EIVADFVPR 546
+ P+ ++ + VG +P+ + +PR
Sbjct: 442 SSQSPKDIDVSPKHVG-FATIPRNYTMSF--LPR 472
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 103 bits (258), Expect = 1e-23
Identities = 55/314 (17%), Positives = 103/314 (32%), Gaps = 68/314 (21%)
Query: 246 VKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQH 305
K Q ++ + ++ +H +D+ +N ++ D L
Sbjct: 229 FKAFNQRFLWFLQKTVQ---EHYQDF------------DKNSVR--DITGALFK---HSK 268
Query: 306 NIDAGSEEYFGLRHLAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKK 365
S + + AG++T ++ L + PEIQ ++++E+ V
Sbjct: 269 KGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIG 328
Query: 366 SKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNI 425
+ D ++ YL + ET R +
Sbjct: 329 R--ERRPRLSDRPQLPYLEAFI--------------------LETFRH---------SSF 357
Query: 426 VPYTIPGSDVTLDV---------GTYVLTPTVALHYSSKYWKDPHKFDPERFSEEN---K 473
+P+TIP S T D V +++ + W+DP +F PERF +
Sbjct: 358 LPFTIPHS-TTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAI 416
Query: 474 DSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHFEIQKTPRTVEHTEFVVGSMVM 533
+ + + F G R+CIG+ A ++ + +L E P + G + M
Sbjct: 417 NKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYG-LTM 475
Query: 534 VPKE-EIVADFVPR 546
E V R
Sbjct: 476 KHARCEHVQ--ARR 487
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 52.5 bits (125), Expect = 3e-07
Identities = 69/510 (13%), Positives = 156/510 (30%), Gaps = 156/510 (30%)
Query: 11 DAEL-VMQVMLKDFSQFNDKGFHIDTDFDMILNNLFFLKGRQWKFQRNKMSTGFTSADFD 69
D E Q KD + F + D + + K + + D
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQD---MPKSI------------LSKEEID 52
Query: 70 MILNNLFFLKGRQWKFQRNKMSTGFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKG 129
I+ ++ + SG +L+ E ++Q +++
Sbjct: 53 HIIM------------SKDAV-----SGTLRLFW--TLLSKQEEMVQKFVEEV------- 86
Query: 130 FHIDNDFDMILNNLFF------LKGRQWKFQRNKMSTGFTSGKLKSMYP-TIHKCSTSFI 182
+ ++ +++ + + R + QR+++ + ++ + Y + +
Sbjct: 87 --LRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL---YNDNQVFAKYNVSRLQPYLKLR 141
Query: 183 NHLTKLSKQTDNLELNI---------KS--AIEDLFTDVVCKCILGLDMH--SIENPNRE 229
L +L N+ K+ A++ + V +C + + +++N N
Sbjct: 142 QALLELRP-----AKNVLIDGVLGSGKTWVALDVCLSYKV-QCKMDFKIFWLNLKNCNSP 195
Query: 230 YKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKNMTFRTENKIQ 289
+ L+ +L Q+ + D I I ++
Sbjct: 196 -----ETVLEMLQKLLY-QIDPNWTSRSDHSSNIK-LRIHSI---------QAELRRLLK 239
Query: 290 RNDFLQTLI---NIYSEQHNIDAGSEEYFGLR--------------HLAANIFVFIVAGY 332
+ L+ N+ + + +A F L L+A I +
Sbjct: 240 SKPYENCLLVLLNVQNAKA-WNA-----FNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 333 ETSALTTTFFLQKMALYPEIQ-ERLRQEILD--------VKKSKEDGAFEYEDFKKMTY- 382
+ LT + Y + + + L +E+L + +S DG ++++K +
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 383 -LSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGT 441
L+ +++ + L L P AE +M+ L + + IP T
Sbjct: 354 KLTTIIESS-----LNVLEP------AEYRKMFDRLSV-FPPS-AH--IP---------T 389
Query: 442 YVLTPTVALHYSSKYWKDPHKFDPERFSEE 471
+L S W D K D +
Sbjct: 390 ILL---------SLIWFDVIKSDVMVVVNK 410
Score = 37.9 bits (87), Expect = 0.011
Identities = 56/397 (14%), Positives = 116/397 (29%), Gaps = 96/397 (24%)
Query: 3 REPVLILNDAELVMQVMLKDFSQFNDKGFHIDTDFDMI---LNNLFFLKGRQWKFQR--- 56
P +L + ++ + +++ +D +I I L L + ++
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL----KSKPYENCLL 248
Query: 57 --NKMSTGFTSADFDM---IL------NNLFFLKGRQWK-FQRNKMSTGFTS-------- 96
+ F++ IL FL + S T
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 97 ---GFYMTREPVLILNDAELVMQV---MLKDFSQFNDKGFHIDND-----FDMILNNLFF 145
P +L + + ++D D H++ D + LN L
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368
Query: 146 LKGRQ--WK---FQRN-KMSTGFTSGKLKSMY--PTIHKCSTSFINHLTKLS---KQTDN 194
+ R+ + F + + T L S+ I +N L K S KQ
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPT-----ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 195 LELNIKSAIEDLFTDVVCKCILGLDMHS--IE--NPNREYKDIQDATLKPN-----WRL- 244
+I ++ ++ K +H ++ N + + D D +
Sbjct: 424 S----TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF-DSDDLIPPYLDQYFYSHIG 478
Query: 245 -HVKQVLQ------FLSPYID-----RKIRITGKHIEDWFYGFAEKNM--TFRT-ENKIQ 289
H+K + F ++D +KIR W + N + + I
Sbjct: 479 HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDST---AWNASGSILNTLQQLKFYKPYIC 535
Query: 290 RND-----FLQTLINIYSEQHNIDAGSEEYFGLRHLA 321
ND + +++ + + + +Y L +A
Sbjct: 536 DNDPKYERLVNAILD-FLPKIEENLICSKYTDLLRIA 571
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 41.5 bits (98), Expect = 6e-04
Identities = 35/199 (17%), Positives = 52/199 (26%), Gaps = 61/199 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ N ++ G ET+ T + +A P + LR + D E
Sbjct: 244 VLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDG-----SADVDTVVE------ 292
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR LR TI G L
Sbjct: 293 -----------------------------EVLRWTSPAMHVLRVTTADVTING--RDLPS 321
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
GT V+ + + DP F P R P I F G C+G
Sbjct: 322 GTPVV-----AWLPAANRDPAEFDDPDTFLPGR---------KPNRHITFGHGMHHCLGS 367
Query: 495 RFAHVQMKSAICEILTHFE 513
A +++ + +
Sbjct: 368 ALARIELSVVLRVLAERVS 386
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 41.5 bits (98), Expect = 6e-04
Identities = 28/199 (14%), Positives = 54/199 (27%), Gaps = 53/199 (26%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ A I ++A E + T + + PE + + +S A
Sbjct: 259 ILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD-----RSLVPRAIA------ 307
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
ETLR P + + R+ + G + +
Sbjct: 308 -----------------------------ETLRYKPPVQLIPRQLSQDTVVGG--MEIKK 336
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPER-FSEENKDSIVPGSFIPFNEGPRQCIG 493
T V + + ++ P F+ R + F G C+G
Sbjct: 337 DTIVF-----CMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVG 391
Query: 494 KRFAHVQMKSAICEILTHF 512
FA +++ +L
Sbjct: 392 TAFAKNEIEIVANIVLDKM 410
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 41.1 bits (97), Expect = 7e-04
Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 54/194 (27%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ +V G +T +F ++ +A PE ++ L + + A E
Sbjct: 239 AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER-----PERIPAACE------ 287
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIV-PYTIPGSDVTLD 438
E LR + + R + Y G V L
Sbjct: 288 -----------------------------ELLRRFS--LVADGRILTSDYEFHG--VQLK 314
Query: 439 VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAH 498
G +L P + + P D R S F G C+G+ A
Sbjct: 315 KGDQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHGSHLCLGQHLAR 365
Query: 499 VQMKSAICEILTHF 512
++ + E LT
Sbjct: 366 REIIVTLKEWLTRI 379
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 41.1 bits (97), Expect = 8e-04
Identities = 35/199 (17%), Positives = 61/199 (30%), Gaps = 60/199 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
N+ + IV G +T+ + T + + P+ +L+ + +
Sbjct: 255 YLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN-----PALVETMVP------ 303
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +R L R I + G T+
Sbjct: 304 -----------------------------EIIRWQTPLAHMRRTAIADSELGG--KTIRK 332
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G V+ + Y S + P +F +R P + F G +C+G
Sbjct: 333 GDKVV-----MWYYSGNRDDEVIDRPEEFIIDRPR--------PRQHLSFGFGIHRCVGN 379
Query: 495 RFAHVQMKSAICEILTHFE 513
R A +Q++ EILT F
Sbjct: 380 RLAEMQLRILWEEILTRFS 398
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 41.2 bits (96), Expect = 9e-04
Identities = 62/381 (16%), Positives = 112/381 (29%), Gaps = 139/381 (36%)
Query: 159 STGFTSGKLKSMYPTIHKCSTSFIN-HLTKLSKQTDNLELNIKSAIEDLFTDVVCKCILG 217
GFT G+L+S S + + ++ ++++ AI LF +G
Sbjct: 255 LLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLF-------FIG 307
Query: 218 LDMHSIENPNREYKDIQDATLKPNWRLHVKQVLQFL-------SPYIDRKIRITG---KH 267
+ +A PN L + L SP + I+ +
Sbjct: 308 V--RC-----------YEAY--PNTSLPPSILEDSLENNEGVPSPM----LSISNLTQEQ 348
Query: 268 IEDWFYGFAEKNMTFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVF 327
++D+ + N +++ +L+N G ++
Sbjct: 349 VQDY---VNKTNSHLPAGKQVE-----ISLVN----------------GAKN-------L 377
Query: 328 IVAGYETS--ALTTTFFLQKMALYPEI-QERLRQEILDVKKSKEDGAFEYEDFKKMT--- 381
+V+G S L T L+K + Q R + S+ F F +
Sbjct: 378 VVSGPPQSLYGLNLT--LRKAKAPSGLDQSR-------IPFSERKLKFSNR-FLPVASPF 427
Query: 382 ---YLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSD---- 434
L D I + L N A+ +++ P+Y T GSD
Sbjct: 428 HSHLLVPASD-----LINKDLVKNNVSFNAKDIQI----PVYD-------TFDGSDLRVL 471
Query: 435 ---VTLDVGTYVLTPTVALHYSSKYWKDPHK--------FDPERFS------EENKDS-- 475
++ + ++ V W+ + F P S NKD
Sbjct: 472 SGSISERIVDCIIRLPV-------KWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTG 524
Query: 476 ---IVPGSFIPFNEGPRQCIG 493
IV G+ + P G
Sbjct: 525 VRVIVAGT---LDINPDDDYG 542
Score = 35.0 bits (80), Expect = 0.070
Identities = 55/332 (16%), Positives = 102/332 (30%), Gaps = 131/332 (39%)
Query: 274 GFAEKNM--TFRTENKIQRNDFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAG 331
G E+ M +K ++ + + D ++ +G L IV
Sbjct: 1625 GSQEQGMGMDLYKTSKAAQDVW-----------NRADNHFKDTYGFSILD------IVIN 1667
Query: 332 YETSALTTTFFLQKMALYPEIQERLRQEILD-VKKSKEDGAFEYED-FKKMTYLSM---- 385
+ LT F +K +R+R+ + ++ DG + E FK++ S
Sbjct: 1668 NPVN-LTIHFGGEK-------GKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTF 1719
Query: 386 -----VLDETTYLT---IL------------EGLTPKNRLIFA-----ETLRMYP----- 415
+L T + T + +GL P + FA E Y
Sbjct: 1720 RSEKGLLSATQF-TQPALTLMEKAAFEDLKSKGLIPADA-TFAGHSLGE----YAALASL 1773
Query: 416 --VLPI-------YLR----RNIVPYTIPGSDVTLDVGTYVLTPTVALHYSSKYWKDPHK 462
V+ I + R + VP G Y + +A+
Sbjct: 1774 ADVMSIESLVEVVFYRGMTMQVAVPRDELGR------SNYGM---IAI------------ 1812
Query: 463 FDPER----FSEENKDSIV------PGSFIP---FNEGPRQCI--GKRFAHVQMKSAICE 507
+P R FS+E +V G + +N +Q + G A + +
Sbjct: 1813 -NPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRA-LD---TVTN 1867
Query: 508 ILTHFEIQKTPRTVEHTEFVVGSMVMVPKEEI 539
+L ++QK ++ + EE+
Sbjct: 1868 VLNFIKLQKID--------IIELQKSLSLEEV 1891
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 40.4 bits (95), Expect = 0.001
Identities = 36/194 (18%), Positives = 56/194 (28%), Gaps = 54/194 (27%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
I + ++ G +T +FF+ +A +PE+ LR + K E
Sbjct: 245 AQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSD-----PLKLMRGAE------ 293
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIV-PYTIPGSDVTLD 438
E R +P + R + G V L
Sbjct: 294 -----------------------------EMFRRFP--VVSEARMVAKDQEYKG--VFLK 320
Query: 439 VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAH 498
G +L PT +P K D R S F GP +C G A
Sbjct: 321 RGDMILLPTALHGLDDAANPEPWKLDFSR---------RSISHSTFGGGPHRCAGMHLAR 371
Query: 499 VQMKSAICEILTHF 512
+++ + E L
Sbjct: 372 MEVIVTLEEWLKRI 385
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 39.2 bits (92), Expect = 0.003
Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 61/198 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ + AG +T+ + +A +P+ RLR + S AFE
Sbjct: 241 APLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD-----PSLARNAFE------ 289
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +R + + R + G T+
Sbjct: 290 -----------------------------EAVRFESPVQTFFRTTTRDVELAG--ATIGE 318
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G VL + S + W DP ++D R + F G C+G+
Sbjct: 319 GEKVL-----MFLGSANRDPRRWDDPDRYDITR---------KTSGHVGFGSGVHMCVGQ 364
Query: 495 RFAHVQMKSAICEILTHF 512
A ++ + + +
Sbjct: 365 LVARLEGEVVLAALARKV 382
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 39.1 bits (92), Expect = 0.003
Identities = 36/219 (16%), Positives = 64/219 (29%), Gaps = 69/219 (31%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
I + I+ G ET+ ++ + P+I + + G E
Sbjct: 178 KIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR--------SGFVE------ 223
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMY-PVLPIYLRRNIVPYTIPGSDVTLD 438
ETLR Y P+ + R I +
Sbjct: 224 -----------------------------ETLRYYSPIQFLPHRFAAEDSYINN--KKIK 252
Query: 439 VGTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIG 493
G V+ ++ S ++ +P F R + F G C+G
Sbjct: 253 KGDQVI-----VYLGSANRDETFFDEPDLFKIGR----------REMHLAFGIGIHMCLG 297
Query: 494 KRFAHVQMKSAICEILTHF---EIQKTPRTVEHTEFVVG 529
A ++ A+ +IL HF +I + + V+G
Sbjct: 298 APLARLEASIALNDILNHFKRIKIDYKKSRLLDNKMVLG 336
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 38.8 bits (91), Expect = 0.004
Identities = 35/200 (17%), Positives = 57/200 (28%), Gaps = 61/200 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+A+ + +VAG ET+ T + ++ YPE ++R + A E
Sbjct: 264 IASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSD----FDGLAPTAVE------ 313
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +R + R + G +
Sbjct: 314 -----------------------------EIVRWASPVVYMRRTLTQDIELRG--TKMAA 342
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFN-EGPRQCIG 493
G V L Y S + DP FD R P + F G C+G
Sbjct: 343 GDKVS-----LWYCSANRDESKFADPWTFDLAR---------NPNPHLGFGGGGAHFCLG 388
Query: 494 KRFAHVQMKSAICEILTHFE 513
A +++ A E+
Sbjct: 389 ANLARREIRVAFDELRRQMP 408
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 38.8 bits (91), Expect = 0.004
Identities = 35/199 (17%), Positives = 56/199 (28%), Gaps = 62/199 (31%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ A F + G +T + + P+ + L + A E
Sbjct: 240 ILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDD-----PEGIPDAVE------ 288
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR+ + R TI T+
Sbjct: 289 -----------------------------ELLRLTSPVQGLARTTTRDVTIGD--TTIPA 317
Query: 440 GTYVLTPTVALHYSS------KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIG 493
G VL L Y S +Y D + D R P + + F+ G C+G
Sbjct: 318 GRRVL-----LLYGSANRDERQYGPDAAELDVTR---------CPRNILTFSHGAHHCLG 363
Query: 494 KRFAHVQMKSAICEILTHF 512
A +Q + A+ E+L
Sbjct: 364 AAAARMQCRVALTELLARC 382
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 38.4 bits (90), Expect = 0.004
Identities = 32/200 (16%), Positives = 59/200 (29%), Gaps = 64/200 (32%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ + VAG ET+ + T + A +P+ E ++ + A +
Sbjct: 258 FGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-------ETAAD------ 304
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +R + + R + Y + G V +
Sbjct: 305 -----------------------------EIVRWATPVTAFQRTALRDYELSG--VQIKK 333
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFN-EGPRQCIG 493
G V+ + Y S + ++DP F+ R P + F G CIG
Sbjct: 334 GQRVV-----MFYRSANFDEEVFQDPFTFNILR---------NPNPHVGFGGTGAHYCIG 379
Query: 494 KRFAHVQMKSAICEILTHFE 513
A + + + H
Sbjct: 380 ANLARMTINLIFNAVADHMP 399
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 38.4 bits (90), Expect = 0.005
Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 59/198 (29%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
A I VF G+ ++ A PE+ R + +S
Sbjct: 223 AIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRND-----ESARAAIIN------ 271
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +RM P +LR I G V ++
Sbjct: 272 -----------------------------EMVRMDPPQLSFLRFPTEDVEIGG--VLIEA 300
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G+ + + + + DP FD R +++ + F GP C G+
Sbjct: 301 GSPIR-----FMIGAANRDPEVFDDPDVFDHTRPPAASRN-------LSFGLGPHSCAGQ 348
Query: 495 RFAHVQMKSAICEILTHF 512
+ + + + +
Sbjct: 349 IISRAEATTVFAVLAERY 366
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 38.0 bits (89), Expect = 0.006
Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 61/198 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
L + ++ G ET+ T + +++ + + L+++ S GA E
Sbjct: 220 LVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD-----PSLLPGAIE------ 268
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR + R G L
Sbjct: 269 -----------------------------EMLRWTAPVKNMCRVLTADTEFHG--TALCA 297
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G ++ L + S + +P KFD +R P S + F G C+G
Sbjct: 298 GEKMM-----LLFESANFDEAVFCEPEKFDVQR---------NPNSHLAFGFGTHFCLGN 343
Query: 495 RFAHVQMKSAICEILTHF 512
+ A +++ +L
Sbjct: 344 QLARLELSLMTERVLRRL 361
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 38.1 bits (89), Expect = 0.006
Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 61/199 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ A AG++T++ ++ + ++ PE + + + +
Sbjct: 257 INAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD-----PALIPRLVD------ 305
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +R + ++R + + G +
Sbjct: 306 -----------------------------EAVRWTAPVKSFMRTALADTEVRG--QNIKR 334
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G ++ L Y S + + +P +FD RF P + F G C+G+
Sbjct: 335 GDRIM-----LSYPSANRDEEVFSNPDEFDITRF---------PNRHLGFGWGAHMCLGQ 380
Query: 495 RFAHVQMKSAICEILTHFE 513
A ++MK E+L +
Sbjct: 381 HLAKLEMKIFFEELLPKLK 399
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 38.1 bits (89), Expect = 0.006
Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 54/194 (27%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ + ++ G +T F + ++ +PE +R+E K E
Sbjct: 246 ALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRRE-----PLKLQRGVE------ 294
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIV-PYTIPGSDVTLD 438
E R + + R +V G L
Sbjct: 295 -----------------------------ELFRRFA--VVSDARYVVSDMEFHG--TMLK 321
Query: 439 VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAH 498
G +L PT ++ DP D R + F +GP +C G A
Sbjct: 322 EGDLILLPTALHGLDDRHHDDPMTVDLSR---------RDVTHSTFAQGPHRCAGMHLAR 372
Query: 499 VQMKSAICEILTHF 512
+++ + E L
Sbjct: 373 LEVTVMLQEWLARI 386
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 37.3 bits (87), Expect = 0.010
Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 61/199 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
A + AG++T++ ++ +A P++ R++ + ++ G E
Sbjct: 279 TAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD-----RNLLPGIVE------ 327
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E +R + ++R + G +
Sbjct: 328 -----------------------------EAIRWTTPVQHFMRTAATDTELCG--QKIAA 356
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G +++ L+Y + + +P KFDP R + F G QC+G
Sbjct: 357 GDWLM-----LNYVAANHDPAQFPEPRKFDPTR---------PANRHLAFGAGSHQCLGL 402
Query: 495 RFAHVQMKSAICEILTHFE 513
A ++M+ + +L +
Sbjct: 403 HLARLEMRVLLDVLLDRVD 421
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 37.2 bits (87), Expect = 0.013
Identities = 38/232 (16%), Positives = 65/232 (28%), Gaps = 76/232 (32%)
Query: 292 DFLQTLINIYSEQHNIDAGSEEYFGLRHLAANIFVFIVAGYETSA-LTTTFFLQKMAL-- 348
D LI ++ + D S E L + + I AGYET+ + L
Sbjct: 209 DMTSLLIAARDDEGDGDRLSPE-----ELRDTLLLMISAGYETTVNVIDQAVH---TLLT 260
Query: 349 YPEIQERLRQEILDVKKSKEDGAFEYEDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFA 408
P+ +R+ + E
Sbjct: 261 RPDQLALVRKGEVTW-----ADVVE----------------------------------- 280
Query: 409 ETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTP---TVALHYSS-----KYWKDP 460
ETLR P + R +D+ L G + + Y++ + +D
Sbjct: 281 ETLRHEPAVKHLPLR------YAVTDIALPDGRTI--ARGEPILASYAAANRHPDWHEDA 332
Query: 461 HKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHF 512
FD R + F G C+G A +++ A+ + F
Sbjct: 333 DTFDATR---------TVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 36.1 bits (84), Expect = 0.026
Identities = 28/193 (14%), Positives = 50/193 (25%), Gaps = 52/193 (26%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
L + ++ G + +A + ++A E++ RL A +
Sbjct: 222 LIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAH-----PELIPNAVD------ 270
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR Y + R T+ +T+
Sbjct: 271 -----------------------------ELLRFYGPAMVG-RLVTQEVTVGD--ITMKP 298
Query: 440 GTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHV 499
G + + P ER P + G +C+G V
Sbjct: 299 GQTAMLWFPIASRDRSAFDSPDNIVIER---------TPNRHLSLGHGIHRCLGAHLIRV 349
Query: 500 QMKSAICEILTHF 512
+ + AI E L
Sbjct: 350 EARVAITEFLKRI 362
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 36.2 bits (84), Expect = 0.027
Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 11/104 (10%)
Query: 409 ETLRMYPVLPIYLRRNIVPYTIPGSDVTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERF 468
E LR++P L + R + + G V+ A + + + +P + D +R
Sbjct: 261 EVLRLHPALHLERRTATAEVRLGE--HVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR- 317
Query: 469 SEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHF 512
+ +A+
Sbjct: 318 --------PDADRALSAHRGHPGRLEELVTALATAALRAAAKAL 353
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 35.3 bits (82), Expect = 0.048
Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 52/194 (26%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ G +T A +A +PE Q LR+ A +
Sbjct: 224 ARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRER-----PDLIPAAAD------ 272
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIV-PYTIPGSDVTLD 438
E +R YP + + RN V G VT+
Sbjct: 273 -----------------------------ELMRRYP--TVAVSRNAVADVDADG--VTIR 299
Query: 439 VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAH 498
G V P+V + ++ P + +R G +C+G A
Sbjct: 300 KGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPI-------RHTTMGVGAHRCVGAGLAR 352
Query: 499 VQMKSAICEILTHF 512
+++ + E L
Sbjct: 353 MEVIVFLREWLGGM 366
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 35.3 bits (82), Expect = 0.048
Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 59/198 (29%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
A ++AG+ T+ + ++ + +P + ++ + E
Sbjct: 231 AANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED-----PGRIPAIVE------ 279
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR P P R + G V +
Sbjct: 280 -----------------------------EVLRYRPPFPQMQRTTTKATEVAG--VPIPA 308
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
V S DP +FDP R + + + F G C+G
Sbjct: 309 DVMVN-----TWVLSANRDSDAHDDPDRFDPSR--KSGGAAQL-----SFGHGVHFCLGA 356
Query: 495 RFAHVQMKSAICEILTHF 512
A ++ + A+ EI+ F
Sbjct: 357 PLARLENRVALEEIIARF 374
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 34.9 bits (81), Expect = 0.054
Identities = 38/196 (19%), Positives = 58/196 (29%), Gaps = 57/196 (29%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
A+ + +AG+ET+ L + L L +PE +LR+ A E
Sbjct: 224 AASTCILLAIAGHETTVNLISNSVL---CLLQHPEQLLKLREN-----PDLIGTAVE--- 272
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR + R I G VT
Sbjct: 273 --------------------------------ECLRYESPTQMTARVASEDIDICG--VT 298
Query: 437 LDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRF 496
+ G V A + + +P FD R P + F G C+G
Sbjct: 299 IRQGEQVYLLLGAANRDPSIFTNPDVFDITR---------SPNPHLSFGHGHHVCLGSSL 349
Query: 497 AHVQMKSAICEILTHF 512
A ++ + AI +L
Sbjct: 350 ARLEAQIAINTLLQRM 365
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 34.6 bits (80), Expect = 0.078
Identities = 36/196 (18%), Positives = 59/196 (30%), Gaps = 57/196 (29%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
+ A + ++AG+ET+ L L A+ P L + S+ E
Sbjct: 246 IIATCNLLLIAGHETTVNLIANAAL---AMLRTPGQWAALAAD-----GSRASAVIE--- 294
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
ET+R P + + R TI T
Sbjct: 295 --------------------------------ETMRYDPPVQLVSRYAGDDLTIGT--HT 320
Query: 437 LDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRF 496
+ G +L A H P +FDP+R + F +G C+G
Sbjct: 321 VPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR---------AQIRHLGFGKGAHFCLGAPL 371
Query: 497 AHVQMKSAICEILTHF 512
A ++ A+ + F
Sbjct: 372 ARLEATVALPALAARF 387
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 33.6 bits (76), Expect = 0.10
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 19/73 (26%)
Query: 224 ENPNR-EYKDIQDATLKPNWRLHVKQVLQFLSPYIDRKIRITGKHIEDWFYGFAEKNMTF 282
E R + D ++ WR K K +E+W +E+
Sbjct: 93 EQRKRLQELDAASKVMEQEWREKAK------------------KDLEEWNQRQSEQVEKN 134
Query: 283 RTENKIQRNDFLQ 295
+ N+I F Q
Sbjct: 135 KINNRIADKAFYQ 147
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 34.1 bits (79), Expect = 0.11
Identities = 31/205 (15%), Positives = 55/205 (26%), Gaps = 72/205 (35%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
+ + + + + AG+ET+ L + L +PE + + + E
Sbjct: 232 IVSTLQLMVAAGHETTISLIVNAVV---NLSTHPEQRALVLSGEAEW-----SAVVE--- 280
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
ETLR L R DV
Sbjct: 281 --------------------------------ETLRFSTPTSHVLIR------FAAEDVP 302
Query: 437 LDVGTYVLTP---TVALHYSS------KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEG 487
+ + P + + Y + + +FD R S I F G
Sbjct: 303 VG-DRVI--PAGDALIVSYGALGRDERAHGPTADRFDLTRTS--------GNRHISFGHG 351
Query: 488 PRQCIGKRFAHVQMKSAICEILTHF 512
P C G + ++ A+ + F
Sbjct: 352 PHVCPGAALSRMEAGVALPALYARF 376
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 34.1 bits (79), Expect = 0.12
Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 64/198 (32%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
+ ++AG ET+ ++ LY + +R++ A E
Sbjct: 200 KEGYFILLMIAGNETTTNLIGNAIEDFTLYNS-WDYVREK-------GALKAVE------ 245
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR P + +R I +D
Sbjct: 246 -----------------------------EALRFSPPVMRTIRVTKEKVKIRD--QVIDE 274
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G V + +S + +KDP F P+R P + F G C+G
Sbjct: 275 GELVR-----VWIASANRDEEVFKDPDSFIPDR---------TPNPHLSFGSGIHLCLGA 320
Query: 495 RFAHVQMKSAICEILTHF 512
A ++ + A+ E F
Sbjct: 321 PLARLEARIALEEFAKKF 338
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 34.1 bits (79), Expect = 0.12
Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 63/198 (31%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
I + ++AG ET+ + + + +R+R+E + A E
Sbjct: 199 KLGYIILLLIAGNETTTNLISNSVIDFTRFNL-WQRIREE------NLYLKAIE------ 245
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLDV 439
E LR P + +R+ + T++
Sbjct: 246 -----------------------------EALRYSPPVMRTVRKTKERVKLGD--QTIEE 274
Query: 440 GTYVLTPTVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G YV + +S + + D KF P+R P + F G C+G
Sbjct: 275 GEYVR-----VWIASANRDEEVFHDGEKFIPDRN---------PNPHLSFGSGIHLCLGA 320
Query: 495 RFAHVQMKSAICEILTHF 512
A ++ + AI E F
Sbjct: 321 PLARLEARIAIEEFSKRF 338
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 32.6 bits (75), Expect = 0.30
Identities = 25/201 (12%), Positives = 54/201 (26%), Gaps = 64/201 (31%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
F+ +VAG T + L +P+ +L+ S E
Sbjct: 230 AVQIAFLLLVAGNATMVNMIALGVA---TLAQHPDQLAQLKANP-----SLAPQFVE--- 278
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E R + + ++R DV
Sbjct: 279 --------------------------------ELCRYHTASALAIKR------TAKEDVM 300
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
+ ++ + + + +++P +F+ R P + F G +C
Sbjct: 301 IGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRC 353
Query: 492 IGKRFAHVQMKSAICEILTHF 512
I + A ++ + + F
Sbjct: 354 IAEHLAKAELTTVFSTLYQKF 374
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 32.6 bits (75), Expect = 0.31
Identities = 37/204 (18%), Positives = 54/204 (26%), Gaps = 72/204 (35%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L A + I AG +T+ L L L PE E ++ E A +
Sbjct: 244 LVALVGAIIAAGTDTTIYLIAFAVL---NLLRSPEALELVKAE-----PGLMRNALD--- 292
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR +L I R D+
Sbjct: 293 --------------------------------EVLRFDNILRIGTVR------FARQDLE 314
Query: 437 LDVGTYVLTP---TVALHYSS-----KYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGP 488
G + V L S + P FD R + + + GP
Sbjct: 315 YC-GASI--KKGEMVFLLIPSALRDGTVFSRPDVFDVRR---------DTSASLAYGRGP 362
Query: 489 RQCIGKRFAHVQMKSAICEILTHF 512
C G A ++ + A+ I F
Sbjct: 363 HVCPGVSLARLEAEIAVGTIFRRF 386
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 32.6 bits (75), Expect = 0.36
Identities = 42/201 (20%), Positives = 61/201 (30%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L + +VAG+ET+ L AL +P+ LR + + DGA E
Sbjct: 253 LLGMAHILLVAGHETTVNLIANGMY---ALLSHPDQLAALRAD-----MTLLDGAVE--- 301
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR + R P V
Sbjct: 302 --------------------------------EMLRYEGPVESATYR------FPVEPVD 323
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
LD G VL H + + + DPH+FD R + F G C
Sbjct: 324 LDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR---------DTAGHLAFGHGIHFC 374
Query: 492 IGKRFAHVQMKSAICEILTHF 512
IG A ++ + A+ +L
Sbjct: 375 IGAPLARLEARIAVRALLERC 395
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 32.2 bits (74), Expect = 0.48
Identities = 26/196 (13%), Positives = 49/196 (25%), Gaps = 57/196 (29%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
+ + AG+ET+ L L + ++ + LR A E
Sbjct: 244 IVGTCVHLLTAGHETTTNFLAKAVL---TLRAHRDVLDELRTT-----PESTPAAVE--- 292
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E +R P + R +
Sbjct: 293 --------------------------------ELMRYDPPVQAVTRWAYEDIRLGD--HD 318
Query: 437 LDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRF 496
+ G+ V+ + + + DP D R + F G C+G
Sbjct: 319 IPRGSRVVALLGSANRDPARFPDPDVLDVHR---------AAERQVGFGLGIHYCLGATL 369
Query: 497 AHVQMKSAICEILTHF 512
A + + + +L
Sbjct: 370 ARAEAEIGLRALLDGI 385
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 31.9 bits (73), Expect = 0.51
Identities = 30/198 (15%), Positives = 53/198 (26%), Gaps = 60/198 (30%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMALYPEIQERLRQEILDVKKSKEDGAFEYEDFKK 379
L ++AG + + + M +PE + R + + A +
Sbjct: 226 LRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGD-----EQSAQRAVD------ 274
Query: 380 MTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVTLD- 438
E +R V R I D+TL
Sbjct: 275 -----------------------------ELIRYLTVPYSPTPR------IAREDLTLAG 299
Query: 439 ----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
G V+ A + D + D R P + F G C+G
Sbjct: 300 QEIKKGDSVICSLPAANRDPALAPDVDRLDVTR---------EPIPHVAFGHGVHHCLGA 350
Query: 495 RFAHVQMKSAICEILTHF 512
A +++++ E+ F
Sbjct: 351 ALARLELRTVFTELWRRF 368
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 31.4 bits (72), Expect = 0.82
Identities = 29/201 (14%), Positives = 55/201 (27%), Gaps = 65/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
A F AG ++ TT + +L P+++ L ++ E
Sbjct: 223 FATIGVTFFGAGVISTGSFLTTALI---SLIQRPQLRNLLHEK-----PELIPAGVE--- 271
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR+ L R + +D+
Sbjct: 272 --------------------------------ELLRINLSFADGLPR------LATADIQ 293
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
+ G VL ++ +++ +P + +R + P S + F G C
Sbjct: 294 VGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN--------PTSHLAFGRGQHFC 345
Query: 492 IGKRFAHVQMKSAICEILTHF 512
G + I +L
Sbjct: 346 PGSALGRRHAQIGIEALLKKM 366
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 31.4 bits (72), Expect = 0.83
Identities = 37/196 (18%), Positives = 60/196 (30%), Gaps = 57/196 (29%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L + V ++AG+E S L L +P+ +R++ S A E
Sbjct: 231 LTSIALVLLLAGFEASVSLIGIGTY---LLLTHPDQLALVRRD-----PSALPNAVE--- 279
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR R I G V
Sbjct: 280 --------------------------------EILRYIAPPETTTRFAAEEVEIGG--VA 305
Query: 437 LDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRF 496
+ + VL A + K + DPH+FD R + F +G C+G+
Sbjct: 306 IPQYSTVLVANGAANRDPKQFPDPHRFDVTR---------DTRGHLSFGQGIHFCMGRPL 356
Query: 497 AHVQMKSAICEILTHF 512
A ++ + A+ + F
Sbjct: 357 AKLEGEVALRALFGRF 372
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 31.0 bits (71), Expect = 0.94
Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L ++A ++T+A + L P+ LR++ S A E
Sbjct: 227 LMNAAGTLLIAAHDTTACMIGLGTA---LLLDSPDQLALLRED-----PSLVGNAVE--- 275
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR + R + DV
Sbjct: 276 --------------------------------ELLRYLTIGQFGGER------VATRDVE 297
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
L G V+ +A + + ++P +FD R P + F G QC
Sbjct: 298 LGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR---------RPAPHLAFGFGAHQC 348
Query: 492 IGKRFAHVQMKSAICEILTHF 512
IG++ A ++++ +
Sbjct: 349 IGQQLARIELQIVFETLFRRL 369
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 31.1 bits (71), Expect = 0.95
Identities = 35/201 (17%), Positives = 60/201 (29%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L A + ++AG+ET+ L L AL +P+ ++ L ++ S A E
Sbjct: 226 LVAMAMLLLIAGHETTVNLIGNGVL---ALLTHPDQRKLLAED-----PSLISSAVE--- 274
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR + R DVT
Sbjct: 275 --------------------------------EFLRFDSPVSQAPIR------FTAEDVT 296
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
G V+ A + + + +P + D R + F G C
Sbjct: 297 YSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR---------DASGGVFFGHGIHFC 347
Query: 492 IGKRFAHVQMKSAICEILTHF 512
+G + A ++ + AI +
Sbjct: 348 LGAQLARLEGRVAIGRLFADR 368
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 31.0 bits (71), Expect = 1.1
Identities = 35/196 (17%), Positives = 60/196 (30%), Gaps = 57/196 (29%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
+ V +VAG+ET+ L L +PE + L ++ G E
Sbjct: 233 VVMIALVLLVAGHETTVNAIALGAL---TLIQHPEQIDVLLRD-----PGAVSGVVE--- 281
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR V +R + G T
Sbjct: 282 --------------------------------ELLRFTSVSDHIVRMAKEDIEVGG--AT 307
Query: 437 LDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGKRF 496
+ G VL ++ +K +++P FD R + F G QC+G+
Sbjct: 308 IKAGDAVLVSITLMNRDAKAYENPDIFDARR---------NARHHVGFGHGIHQCLGQNL 358
Query: 497 AHVQMKSAICEILTHF 512
A +++ A+ +
Sbjct: 359 ARAELEIALGGLFARI 374
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 30.7 bits (70), Expect = 1.3
Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L + + ++AG+ET+A +T+ + L +PE LR + +S GA E
Sbjct: 234 LISTAMLLLIAGHETTASMTSLSVI---TLLDHPEQYAALRAD-----RSLVPGAVE--- 282
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR + I R + +D+
Sbjct: 283 --------------------------------ELLRYLAIADIAGGR------VATADIE 304
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
++ G V+ + ++DP D R + F G QC
Sbjct: 305 VEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR---------SARHHLAFGFGVHQC 355
Query: 492 IGKRFAHVQMKSAICEILTHF 512
+G+ A ++++ + ++
Sbjct: 356 LGQNLARLELEVILNALMDRV 376
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 30.7 bits (70), Expect = 1.3
Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 20/109 (18%)
Query: 409 ETLRMYPVLPIYLRRNIVPYTIPGSDVTLD-----VGTYVLTPTVALHYSSKYWKDPHKF 463
E +R + R + DV +D G YVL + + DP
Sbjct: 284 ELVRYLSPVQAPNPR------LAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVL 337
Query: 464 DPERFSEENKDSIVPGSFIPFNEGPRQCIGKRFAHVQMKSAICEILTHF 512
D R S + F G C+G A ++ A + F
Sbjct: 338 DANR---------AAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 30.7 bits (70), Expect = 1.3
Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L + F+ + AG+ET+A + + + L +PE ++ + A E
Sbjct: 235 LVSLAFLLLTAGHETTANMISLGVV---GLLSHPEQLTVVKAN-----PGRTPMAVE--- 283
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR + + R + DV
Sbjct: 284 --------------------------------ELLRYFTIADGVTSR------LATEDVE 305
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
+ G V+ ++ ++ +KDP D ER + F GP QC
Sbjct: 306 IGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER---------GARHHLAFGFGPHQC 356
Query: 492 IGKRFAHVQMKSAICEILTHF 512
+G+ A ++++ +
Sbjct: 357 LGQNLARMELQIVFDTLFRRI 377
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 30.3 bits (69), Expect = 2.0
Identities = 33/201 (16%), Positives = 60/201 (29%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYED 376
L + + + I AG ET+ + L L PE+ LR++ A +
Sbjct: 239 LLSTLGITINAGRETTTSMIALSTL---LLLDRPELPAELRKD-----PDLMPAAVD--- 287
Query: 377 FKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSDVT 436
E LR+ V R + D+
Sbjct: 288 --------------------------------ELLRVLSVADSIPLR------VAAEDIE 309
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
L V+ ++ + + DP + D R + F G QC
Sbjct: 310 LSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHR---------TDNHHVAFGYGVHQC 360
Query: 492 IGKRFAHVQMKSAICEILTHF 512
+G+ A ++++ A+ +L
Sbjct: 361 VGQHLARLELEVALETLLRRV 381
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport,
iron metabolism, binding protein; HET: HEM; 2.30A
{Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB:
1qjs_A*
Length = 460
Score = 30.1 bits (67), Expect = 2.0
Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 11/78 (14%)
Query: 28 DKGFHIDTDFDMILNNLFFLKGRQ-WKFQRNKMST---------GFTSADFDMILNNLFF 77
G+ D + F K WK R G A F +++
Sbjct: 53 SDGWSFDATTLDDNGTMLFFKDEFVWKSHRGIRELISERWKNFIGPVDAAFRHGHTSVYL 112
Query: 78 LKGRQ-WKFQRNKMSTGF 94
+KG + W + K +
Sbjct: 113 IKGDKVWVYTSEKNEKVY 130
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 29.9 bits (68), Expect = 2.1
Identities = 28/201 (13%), Positives = 47/201 (23%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYEDF 377
+ G + L E+ R+R+ A +
Sbjct: 235 AVGLAGPLQIGGEAVTHNVGQMLY---LLLTRRELMARMRER-----PGARGTALD---- 282
Query: 378 KKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMY-PVLPIYLRRNIVPYTIPGSDVT 436
E LR + L R I DV
Sbjct: 283 -------------------------------ELLRWISHRTSVGLAR------IALEDVE 305
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
+ G V +A + + DP + D +R P + + G C
Sbjct: 306 VHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR---------DPNPHLAYGNGHHFC 356
Query: 492 IGKRFAHVQMKSAICEILTHF 512
G A +Q + + +L
Sbjct: 357 TGAVLARMQTELLVDTLLERL 377
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 29.9 bits (68), Expect = 2.1
Identities = 39/198 (19%), Positives = 63/198 (31%), Gaps = 62/198 (31%)
Query: 320 LAANIFVFIVAGYETSA-LTTTFFLQKMAL--YPEIQERLRQ--EILDVKKSKEDGAFEY 374
+ + + FI G+ET A L +L +P+ + LR+ ++L A E
Sbjct: 223 IVSTVVTFIFTGHETVASQVGNAVL---SLLAHPDQLDLLRRRPDLLA-------QAVE- 271
Query: 375 EDFKKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIYLRRNIVPYTIPGSD 434
E LR P + R+ V + G
Sbjct: 272 ----------------------------------ECLRYDPSVQSNTRQLDVDVELRG-- 295
Query: 435 VTLDVGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQCIGK 494
L V+ A + + + P FD ER P + F G R C+G
Sbjct: 296 RRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER---------DPVPSMSFGAGMRYCLGS 346
Query: 495 RFAHVQMKSAICEILTHF 512
A Q+++A+ L
Sbjct: 347 YLARTQLRAAV-AALARL 363
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 29.5 bits (67), Expect = 3.0
Identities = 36/201 (17%), Positives = 54/201 (26%), Gaps = 66/201 (32%)
Query: 320 LAANIFVFIVAGYETSALTTTFFLQKMAL--YPEIQERLRQEILDVKKSKEDGAFEYEDF 377
+ + G + + F L PE+ ERLR E A +
Sbjct: 232 AVGLAVLLQIGGEAVTNNSGQMFH---LLLSRPELAERLRSE-----PEIRPRAID---- 279
Query: 378 KKMTYLSMVLDETTYLTILEGLTPKNRLIFAETLRMYPVLPIY-LRRNIVPYTIPGSDVT 436
E LR P L R I DV
Sbjct: 280 -------------------------------ELLRWIPHRNAVGLSR------IALEDVE 302
Query: 437 LD-----VGTYVLTPTVALHYSSKYWKDPHKFDPERFSEENKDSIVPGSFIPFNEGPRQC 491
+ G V +A + + + DP + D ER P + F GP C
Sbjct: 303 IKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER---------SPNPHVSFGFGPHYC 353
Query: 492 IGKRFAHVQMKSAICEILTHF 512
G A ++ + + +L
Sbjct: 354 PGGMLARLESELLVDAVLDRV 374
>3rh3_A Uncharacterized DUF3829-like protein; all alpha protein, structural
genomics, joint center for STR genomics, JCSG; HET: MSE;
2.10A {Bacteroides thetaiotaomicron}
Length = 264
Score = 29.1 bits (64), Expect = 3.6
Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 294 LQTLINIYSEQHNIDAGSEEYFGLR---HLAANIFVFIVAGYETSALTTTFFLQKMALYP 350
+Q+++N+YS +H +D + L A + V GY+ FL + +
Sbjct: 174 VQSIMNLYSRKHAMDGVRIDLKMAELEKELKAAEKIPAVTGYDEELKNFQSFLSTVKSFM 233
Query: 351 EIQERLRQEILDVKKSKEDGAFEYEDFKKMTY 382
D++K++ GA+ ++++ M+
Sbjct: 234 N----------DMQKARSKGAYSDKEYQAMSE 255
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length,
metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2
b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB:
1gxd_A
Length = 631
Score = 29.1 bits (64), Expect = 4.5
Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 46/150 (30%)
Query: 32 HIDTDFDMILNN-LFFLKGRQ-WKFQRNKMSTGF----TSADFDMILNNL---------- 75
ID ++ F G + W + + + G+ TS + +
Sbjct: 490 KIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNK 549
Query: 76 ---FFLKGRQWKF--QRNKMSTGFTSGFYMTREPVLILNDAELVMQVMLKDFSQFNDKGF 130
F + W++ + KM GF P LI + +N
Sbjct: 550 KTYIFAGDKFWRYNEVKKKMDPGF---------PKLIADA--------------WNAIPD 586
Query: 131 HIDNDFDMILN-NLFFLKG-RQWKFQRNKM 158
++D D+ + +F KG K + +
Sbjct: 587 NLDAVVDLQGGGHSYFFKGAYYLKLENQSL 616
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 28.1 bits (62), Expect = 7.2
Identities = 15/107 (14%), Positives = 33/107 (30%), Gaps = 19/107 (17%)
Query: 457 WKDPHKFDPERFSEENK------DSIVPGSFIPFN---------EGPRQCIGKRFAHVQM 501
+ + + F+ + + K + I+P FI F G Q + +
Sbjct: 156 FLNFNSFNLDEYEHYEKAENGDLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFK 215
Query: 502 KSAICEILTHFEIQKTPRTVEHTEFVVGSMVM----VPKEEIVADFV 544
+ I+ + + F + P + IV +F+
Sbjct: 216 NHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFL 262
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation,
nucleotide-binding, hydrolase, RNA-binding, ATP-binding,
DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Length = 185
Score = 27.6 bits (62), Expect = 9.1
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 10/56 (17%)
Query: 375 EDFKKMTYLSMVLDETTYLTILEGLTPKNR-LIFAETLRMYPVLPIYLRRNIVPYT 429
E+ K ++L L +L + L+F ET + L +L T
Sbjct: 28 EESDKRSFL---------LDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACT 74
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.139 0.416
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,465,577
Number of extensions: 508471
Number of successful extensions: 1592
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1420
Number of HSP's successfully gapped: 144
Length of query: 549
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 451
Effective length of database: 3,965,535
Effective search space: 1788456285
Effective search space used: 1788456285
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (26.8 bits)