Query psy10371
Match_columns 219
No_of_seqs 137 out of 1027
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 16:12:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10371.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10371hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hn6_A Glucosamine-6-phosphate 100.0 4.7E-61 1.6E-65 409.8 25.9 218 1-218 22-247 (289)
2 3tx2_A Probable 6-phosphogluco 100.0 3.2E-58 1.1E-62 385.6 15.9 203 1-219 8-230 (251)
3 3lwd_A 6-phosphogluconolactona 100.0 1.8E-58 6.2E-63 381.4 13.1 202 1-218 3-212 (226)
4 3ico_A 6PGL, 6-phosphogluconol 100.0 7.5E-58 2.6E-62 386.4 16.0 203 1-219 24-246 (268)
5 3oc6_A 6-phosphogluconolactona 100.0 4.2E-58 1.4E-62 384.3 13.5 203 1-219 8-228 (248)
6 3nwp_A 6-phosphogluconolactona 100.0 8.6E-57 2.9E-61 373.0 16.2 198 1-218 6-216 (233)
7 3lhi_A Putative 6-phosphogluco 100.0 2.4E-56 8.3E-61 370.3 16.2 204 1-218 3-215 (232)
8 3eb9_A 6-phosphogluconolactona 100.0 6.2E-56 2.1E-60 374.6 18.4 201 2-218 6-241 (266)
9 3e15_A Glucose-6-phosphate 1-d 100.0 3.1E-55 1.1E-59 375.7 8.7 213 1-218 27-278 (312)
10 1vl1_A 6PGL, 6-phosphogluconol 100.0 3E-53 1E-57 351.6 13.8 195 2-219 15-218 (232)
11 3css_A 6-phosphogluconolactona 100.0 8.4E-53 2.9E-57 355.9 16.4 205 1-219 6-243 (267)
12 1ne7_A Glucosamine-6-phosphate 100.0 3.6E-51 1.2E-55 349.5 23.6 218 1-218 1-226 (289)
13 1y89_A DEVB protein; structura 100.0 8.8E-52 3E-56 344.3 13.3 199 1-218 2-215 (238)
14 1fs5_A Glucosamine-6-phosphate 100.0 9E-49 3.1E-53 330.9 24.2 218 1-218 1-226 (266)
15 2bkx_A Glucosamine-6-phosphate 100.0 3.8E-48 1.3E-52 322.6 23.1 213 1-219 1-221 (242)
16 2ri0_A Glucosamine-6-phosphate 100.0 3.9E-45 1.3E-49 303.1 22.1 205 1-219 2-214 (234)
17 2okg_A Central glycolytic gene 99.9 2.9E-27 9.9E-32 198.3 1.9 195 1-212 23-236 (255)
18 2r5f_A Transcriptional regulat 99.9 1.9E-25 6.6E-30 188.1 6.9 188 10-212 41-247 (264)
19 2gnp_A Transcriptional regulat 99.9 1E-24 3.5E-29 183.8 4.2 188 10-212 41-244 (266)
20 2o0m_A Transcriptional regulat 99.9 1.9E-23 6.5E-28 182.1 -0.2 190 10-213 125-325 (345)
21 2w48_A Sorbitol operon regulat 99.8 5.9E-22 2E-26 170.5 2.1 189 10-212 93-298 (315)
22 3nze_A Putative transcriptiona 99.6 1.4E-14 4.7E-19 121.9 10.4 185 11-212 37-246 (267)
23 3kv1_A Transcriptional repress 99.3 9.9E-14 3.4E-18 116.6 -1.2 188 10-212 39-244 (267)
24 3efb_A Probable SOR-operon reg 99.3 1E-12 3.5E-17 110.4 4.1 180 10-212 44-249 (266)
25 1wy5_A TILS, hypothetical UPF0 70.7 8.5 0.00029 32.0 6.2 56 17-75 8-65 (317)
26 1ni5_A Putative cell cycle pro 68.8 12 0.00042 32.6 7.0 42 32-75 13-54 (433)
27 3fiu_A NH(3)-dependent NAD(+) 66.6 7.1 0.00024 31.5 4.7 64 1-74 1-64 (249)
28 3fe2_A Probable ATP-dependent 60.6 50 0.0017 25.5 8.7 61 3-73 106-184 (242)
29 3p52_A NH(3)-dependent NAD(+) 51.7 40 0.0014 27.0 6.8 59 8-75 5-63 (249)
30 2dpl_A GMP synthetase, GMP syn 49.6 82 0.0028 25.9 8.6 74 9-94 3-77 (308)
31 1wxi_A NH(3)-dependent NAD(+) 49.5 18 0.00063 29.5 4.4 39 8-48 18-56 (275)
32 1kqp_A NAD+ synthase, NH(3)-de 47.6 22 0.00076 28.8 4.6 38 8-48 17-54 (271)
33 1q0u_A Bstdead; DEAD protein, 45.2 79 0.0027 23.8 7.4 26 44-73 133-158 (219)
34 3dpi_A NAD+ synthetase; ssgcid 43.8 28 0.00095 28.7 4.6 35 8-45 25-59 (285)
35 1xng_A NH(3)-dependent NAD(+) 42.2 73 0.0025 25.4 7.0 59 8-75 4-62 (268)
36 3q4g_A NH(3)-dependent NAD(+) 41.9 31 0.0011 28.3 4.6 38 8-48 19-56 (279)
37 2o8v_A Phosphoadenosine phosph 39.8 44 0.0015 26.6 5.2 36 33-75 46-81 (252)
38 1gpm_A GMP synthetase, XMP ami 39.5 1.4E+02 0.0048 26.5 9.0 73 10-94 211-284 (525)
39 3bor_A Human initiation factor 38.6 1.3E+02 0.0044 23.0 7.9 26 44-73 156-181 (237)
40 1sur_A PAPS reductase; assimil 38.3 80 0.0027 24.1 6.4 36 33-75 45-80 (215)
41 2i4i_A ATP-dependent RNA helic 37.9 1.2E+02 0.0041 25.0 8.0 61 3-73 105-183 (417)
42 3phz_A Ricin B-related lectin; 36.9 22 0.00074 29.5 2.9 87 44-143 152-254 (286)
43 1zun_A Sulfate adenylyltransfe 35.3 82 0.0028 26.2 6.3 58 10-75 29-86 (325)
44 2wsi_A FAD synthetase; transfe 33.0 2E+02 0.0069 23.5 10.6 102 23-134 41-167 (306)
45 1wrb_A DJVLGB; RNA helicase, D 32.4 1.7E+02 0.0058 22.4 8.3 16 58-73 167-182 (253)
46 2z5e_A Proteasome assembling c 32.4 1.2E+02 0.004 21.6 5.9 51 9-61 71-121 (122)
47 2e18_A NH(3)-dependent NAD(+) 31.3 54 0.0018 26.0 4.4 53 9-73 6-58 (257)
48 2j0s_A ATP-dependent RNA helic 30.4 2E+02 0.0067 23.7 8.1 26 44-73 162-187 (410)
49 1ihn_A Hypothetical protein MT 29.8 39 0.0013 23.7 2.9 25 115-141 54-78 (113)
50 2oxc_A Probable ATP-dependent 29.6 1.7E+02 0.0058 22.1 7.1 15 59-73 160-174 (230)
51 2ab1_A Hypothetical protein; H 29.2 42 0.0014 23.9 3.0 21 116-138 55-75 (122)
52 1qde_A EIF4A, translation init 28.2 1.8E+02 0.0062 21.6 6.9 25 45-73 139-163 (224)
53 3n05_A NH(3)-dependent NAD(+) 28.0 53 0.0018 29.7 4.2 60 8-75 305-364 (590)
54 3iuy_A Probable ATP-dependent 28.0 1.7E+02 0.0059 21.9 6.8 16 58-73 160-175 (228)
55 3ber_A Probable ATP-dependent 27.9 2.1E+02 0.0071 22.1 8.0 62 3-73 115-194 (249)
56 3fmo_B ATP-dependent RNA helic 27.8 2E+02 0.0068 23.1 7.5 27 44-73 217-243 (300)
57 2fvt_A Conserved hypothetical 27.3 27 0.00094 25.4 1.8 22 116-137 59-80 (135)
58 1jgt_A Beta-lactam synthetase; 27.3 74 0.0025 28.3 5.0 47 7-54 217-263 (513)
59 2pl3_A Probable ATP-dependent 27.1 2E+02 0.0069 21.6 7.4 27 44-73 153-179 (236)
60 1nu0_A Hypothetical protein YQ 25.9 1.5E+02 0.005 21.4 5.6 47 18-75 43-98 (138)
61 2pc4_A 41 kDa antigen, fructos 25.5 2.7E+02 0.0092 23.8 7.8 73 15-98 255-327 (369)
62 2db3_A ATP-dependent RNA helic 25.1 1.7E+02 0.0059 24.8 6.9 16 58-73 196-211 (434)
63 3ged_A Short-chain dehydrogena 24.8 1.1E+02 0.0037 24.3 5.1 37 97-133 48-84 (247)
64 1hv8_A Putative ATP-dependent 24.7 2.4E+02 0.0081 22.5 7.4 61 3-73 78-155 (367)
65 3tqi_A GMP synthase [glutamine 24.6 2E+02 0.007 25.5 7.4 57 32-94 230-287 (527)
66 3eiq_A Eukaryotic initiation f 24.5 2.9E+02 0.0098 22.5 8.5 26 44-73 166-191 (414)
67 1q15_A CARA; CMPR, (2S,5S)-5-c 24.5 64 0.0022 28.6 4.0 43 7-50 214-256 (503)
68 2oq2_A Phosphoadenosine phosph 24.1 1.2E+02 0.0042 24.0 5.4 39 33-75 42-80 (261)
69 4gmk_A Ribose-5-phosphate isom 24.0 37 0.0013 27.1 2.1 44 7-57 2-45 (228)
70 3fwk_A FMN adenylyltransferase 23.4 3.2E+02 0.011 22.6 11.2 104 22-135 45-171 (308)
71 3a2k_A TRNA(Ile)-lysidine synt 23.4 87 0.003 27.4 4.6 52 20-75 5-58 (464)
72 3ilv_A Glutamine-dependent NAD 23.1 87 0.003 28.6 4.7 32 9-43 283-314 (634)
73 2a7y_A Hypothetical protein RV 23.1 26 0.00089 23.4 0.8 14 133-146 45-58 (83)
74 1iv0_A Hypothetical protein; r 22.7 1.8E+02 0.0062 19.5 6.5 49 15-75 38-95 (98)
75 3dkp_A Probable ATP-dependent 21.4 1.6E+02 0.0056 22.3 5.5 28 44-73 156-183 (245)
76 3gdw_A Sigma-54 interaction do 20.0 2.5E+02 0.0084 20.1 6.8 42 32-73 31-72 (139)
No 1
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=100.00 E-value=4.7e-61 Score=409.76 Aligned_cols=218 Identities=56% Similarity=0.922 Sum_probs=203.9
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc---cc
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG---RN 77 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v---~~ 77 (219)
|++++++|++++++.+|++|.+.|++++++++++++|+|||||||..+|+.|++.++..++||++|++|++|||+ ++
T Consensus 22 M~i~i~~~~~~la~~aA~~i~~~i~~a~~~~~~~~~l~LsgGsTP~~~y~~L~~~~~~~~idw~~v~~f~~DEr~gvp~~ 101 (289)
T 3hn6_A 22 MRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEEN 101 (289)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTT
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCCccHHHHHHHHHHhHhhcCCCchheEEEeCcceecCCCC
Confidence 899999999999999999999999998875356799999999999999999999888889999999999999976 56
Q ss_pred h--HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEE
Q psy10371 78 F--LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 154 (219)
Q Consensus 78 ~--~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v 154 (219)
| ||+ +|+++||++++||++|+|.+++...+++++|++|++.|++.++||++|||||+||||||||||+++.+.+++|
T Consensus 102 ~~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~d~~~~a~~Ye~~i~~~~~~Dl~lLGmG~DGH~asnfPg~~l~~~t~~v 181 (289)
T 3hn6_A 102 HPESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIK 181 (289)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHTTSCSEEEEECCTTSCBTTBCTTCCTTCCSEEE
T ss_pred cHHHHHHHHHHHhhccCCCCHHHeecCCCCCCCHHHHHHHHHHHHhhcCCCCEEEEccCCCCceeecCCCCcccccceEE
Confidence 6 665 6899999999999999999998777999999999999999999999999999999999999999999999999
Q ss_pred ECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCC
Q psy10371 155 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPS 218 (219)
Q Consensus 155 ~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa 218 (219)
.+++.|+..|+++|+.+.+++|++|||||+++|++||+|+|+ +|++|+++++++++|+. ..+||
T Consensus 182 ~l~~~t~~~n~~~f~~~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~~~~~~Pa 247 (289)
T 3hn6_A 182 TLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTI 247 (289)
T ss_dssp ECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGG
T ss_pred eccHHHHHHhhhhccCCCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCCCCcccCh
Confidence 999999999999997678999999999999999999999999 99999999999999884 57887
No 2
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=100.00 E-value=3.2e-58 Score=385.59 Aligned_cols=203 Identities=17% Similarity=0.243 Sum_probs=181.2
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
+++++++|++++++.+|++|++.|++++++ +++++|+||||+||+.+|+.|++.+ .++||++|++||+|||+ ++|
T Consensus 8 ~~i~i~~~~~~l~~~~A~~i~~~i~~a~~~-~~~~~l~LsgGstP~~~y~~L~~~~--~~idw~~v~~f~~DEr~vp~~~ 84 (251)
T 3tx2_A 8 TIIEKYADTDALVTAAGDRLASAITGALAE-RGKAMIVLTGGGTGIALLKHLRDVA--SGLDWTNVHVFWGDDRYVPKTD 84 (251)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHH-HSCEEEEECCSHHHHHHHHHHHHHH--TTSCGGGEEEEESEEESSCTTC
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECCCchHHHHHHHHHhhc--cCCCCceeEEEeeeeccCCCCC
Confidence 368999999999999999999999998876 8899999999999999999999865 68999999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCC----CCHHHHHHHHHHHHHH-------hCCccEEEEeecCCCcccccCCC
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNA----PDLHAECVQYEKDIKE-------AGGIHLFVGGIGPDGHIAFNEPG 144 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~----~~~~~~~~~y~~~i~~-------~~~~Dl~lLG~G~DGHiaslfP~ 144 (219)
||+ +|+++||++++||++|+|++++.. .+++++|++|++.|++ .++||++|||||+||||||||||
T Consensus 85 ~~Sn~~~~~~~ll~~v~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~~~~~Dl~lLG~G~DGH~as~fPg 164 (251)
T 3tx2_A 85 PERNAWQAWEALLEHVNFPLRNMHAMPNSESEYGTDLDAAALAYEQLLAANAEPGQDCPAFDVHLLGMGGEGHINSLFPH 164 (251)
T ss_dssp TTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSSCTTCHHHHHHHHHHHHHHTSCTTCSSCCCSEEEECCCTTCCBTTBCTT
T ss_pred hHHHHHHHHHHhhccCCCCHHHEEECCCcccccCCCHHHHHHHHHHHHHhhhccccCCCCCCEEEECCCCCCceEEcCCc
Confidence 665 689999999999999999998864 5899999999999998 78999999999999999999999
Q ss_pred CCCCCcc--eEEECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCCC
Q psy10371 145 SSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPSG 219 (219)
Q Consensus 145 ~~~~~~~--~~v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa~ 219 (219)
+++.+.+ +++.++ +++++|++|||||+++|++||+|+|+ +|++|+++++++++|+. .++||.
T Consensus 165 ~~~~~~~~~~vv~~~-------------~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas 230 (251)
T 3tx2_A 165 TDAVKETQRLVVAVP-------------DSPKPPPQRITLTLPAIQRSREVWLVVSGEAKADAVAAAVGGADPVDVPAA 230 (251)
T ss_dssp CHHHHCSSCSEEEES-------------CCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGG
T ss_pred ChhhccCcceEEEec-------------CCCCCCCcEEEECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCCCCChH
Confidence 9754333 344432 46788999999999999999999999 99999999999999874 578873
No 3
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=100.00 E-value=1.8e-58 Score=381.39 Aligned_cols=202 Identities=18% Similarity=0.162 Sum_probs=178.8
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
|+ ++|+|++++++.+|++|++.+++++++ +++++|+||||+||+.+|+.|++ .++||+||++|++|||+ ++|
T Consensus 3 m~-~i~~~~~~l~~~~A~~i~~~i~~~i~~-~~~~~l~LsgGstp~~~y~~L~~----~~idw~~v~~f~~DEr~vp~~~ 76 (226)
T 3lwd_A 3 MN-TTQEGRQRLAERLADTVAQALEADLAK-RERALLVVSGGSTPKPFFTSLAA----KALPWARVDVTLADERWVTADD 76 (226)
T ss_dssp -C-HHHHHHHHHHHHHHHHHHHHHHHHHTT-SSCEEEEECCSSTTHHHHHHHHT----SCSCGGGEEEEESEEESSCTTS
T ss_pred Cc-eecCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEcCCCCHHHHHHHHHh----cCCCchhEEEEEeeecccCCCC
Confidence 78 899999999999999999999998886 89999999999999999999997 78999999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhC-CccEEEEeecCCCcccccCCCCCCCCcceEE
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAG-GIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 154 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~-~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v 154 (219)
||+ +|+++||++ +++++|+|++++...+++++|++|++.|++.+ +||++|||||+||||||||||++.
T Consensus 77 ~~Sn~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~ye~~i~~~~~~~Dl~lLG~G~dGH~as~fPg~~~------- 148 (226)
T 3lwd_A 77 ADSNARLVRETLLVG-PAAEACFHPLTTDDDTPEAGVETVAERLESLPWPASAVILGMGGDGHTASLFPDSEQ------- 148 (226)
T ss_dssp TTCHHHHHHHHTSSG-GGGGSEEECSCCSSSSHHHHHHHHHHHHHTSCSSBSEEEECCCTTSCBTTBCTTCTT-------
T ss_pred hHHHHHHHHHHhcCC-CCcHHhEecCCCCcCCHHHHHHHHHHHHHhcCCCCCEEEECcCCCCCeeecCCCChh-------
Confidence 665 689999999 78999999999887899999999999999998 999999999999999999999862
Q ss_pred ECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCC
Q psy10371 155 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPS 218 (219)
Q Consensus 155 ~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa 218 (219)
+++.| ..+..+|..+.+++|++|||||+++|++||+|+|+ +|++|+++++++++|+. .++||
T Consensus 149 -L~~~~-~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pa 212 (226)
T 3lwd_A 149 -LATAL-ETTSAAVVVHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPI 212 (226)
T ss_dssp -HHHHH-HCCSSEEEECCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTTSTT
T ss_pred -hhhhh-ccCCeEEecCCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCCCCcCCh
Confidence 22222 22333443357889999999999999999999999 99999999999999874 57997
No 4
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.5e-58 Score=386.36 Aligned_cols=203 Identities=20% Similarity=0.276 Sum_probs=181.0
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
|++++|+|++++++.+|++|++.|++++++ +++++|+||||+||+.+|+.|++.+ .++||++|++||+|||+ ++|
T Consensus 24 m~i~v~~~~~~l~~~~A~~i~~~i~~ai~~-~~~~~l~LsgGstP~~~y~~L~~~~--~~idw~~v~~f~~DEr~vp~~~ 100 (268)
T 3ico_A 24 SSIEIFPDSDILVAAAGKRLVGAIGAAVAA-RGQALIVLTGGGNGIALLRYLSAQA--QQIEWSKVHLFWGDERYVPEDD 100 (268)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHHHH-HSCEEEEECCSHHHHHHHHHHHHHG--GGSCGGGEEEEESEEECSCTTC
T ss_pred cceEecCCcchhhhhhcchhhhHhHHHHHh-cCceEEEEecCCchhHHHHHHHHHh--hhhhheeeEEeecccccCCCCc
Confidence 789999999999999999999999998876 8899999999999999999999865 67999999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCC----CCHHHHHHHHHHHHHHh-------CCccEEEEeecCCCcccccCCC
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNA----PDLHAECVQYEKDIKEA-------GGIHLFVGGIGPDGHIAFNEPG 144 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~----~~~~~~~~~y~~~i~~~-------~~~Dl~lLG~G~DGHiaslfP~ 144 (219)
||+ +|+++||++++||++|+|+++++. .+++++|++|++.|++. ++||++|||||+||||||||||
T Consensus 101 ~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~~p~~Dl~lLGmG~DGH~as~fPg 180 (268)
T 3ico_A 101 DERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPH 180 (268)
T ss_dssp TTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHSSTTCSSCCCSEEEECCCTTCCBTTBCTT
T ss_pred chhHHHHHHHHHHhccCCcccccccccccCCCcccchhHHHHHHHHHHhhccCCCCCCCCcceEEeccCCcccccccCCC
Confidence 665 689999999999999999998853 68999999999999987 5899999999999999999999
Q ss_pred CCCCCcc-e-EEECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCCC
Q psy10371 145 SSLASRT-R-LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPSG 219 (219)
Q Consensus 145 ~~~~~~~-~-~v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa~ 219 (219)
+++.+.+ + ++.+. +++++|++|||||+++|++||+|+|+ +|++|+++++++++|+. .++||.
T Consensus 181 ~~~~~~t~~~vv~~~-------------~~~~~P~~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas 246 (268)
T 3ico_A 181 SPAVLESTRMVVAVD-------------DSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAA 246 (268)
T ss_dssp CHHHHCSSCSEEEES-------------CCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGG
T ss_pred ChhhhhhceEEEEec-------------CCCCCCCceEEEechhhhccceEEEEecCCCchHHHHHHhcCCCCcccccc
Confidence 9754333 3 33332 45788999999999999999999999 99999999999999874 578873
No 5
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.2e-58 Score=384.25 Aligned_cols=203 Identities=21% Similarity=0.296 Sum_probs=180.8
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
+++++|+|++++++.+|++|++.|++++++ +++++|+||||+||..+|+.|++.+ .++||++|++|++|||+ ++|
T Consensus 8 ~~i~i~~~~~~l~~~~A~~i~~~i~~~~~~-~~~~~l~LsgGstP~~~y~~L~~~~--~~idw~~v~~f~~DEr~vp~~~ 84 (248)
T 3oc6_A 8 TVIERHADTAALVAAAGDRLVDAISSAIGE-RGQATIVLTGGGTGIGLLKRVRERS--GEIDWSKVHIYWGDERFVPQDD 84 (248)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHH-HSCEEEEECCSHHHHHHHHHHHHTG--GGSCGGGEEEEESEEECSCTTC
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECCCccHHHHHHHHHhhc--cCCCcceEEEEEeeeccCCCCC
Confidence 478999999999999999999999998886 8899999999999999999999855 67999999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCC----CCHHHHHHHHHHHHHH-----hCCccEEEEeecCCCcccccCCCCC
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNA----PDLHAECVQYEKDIKE-----AGGIHLFVGGIGPDGHIAFNEPGSS 146 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~----~~~~~~~~~y~~~i~~-----~~~~Dl~lLG~G~DGHiaslfP~~~ 146 (219)
||+ +|+++||++++||++|+|++++.. .+++++|++|++.|++ .++||++|||||+||||||||||++
T Consensus 85 ~~Sn~~~~~~~ll~~v~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~~~Dl~lLG~G~dGH~aslfPg~~ 164 (248)
T 3oc6_A 85 DERNDKQAREALLDHIGIPPVNVHAMAASDGEFGDDLEAAAAGYAQLLSANFDSSVPGFDVHLLGMGGEGHVNSLFPDTD 164 (248)
T ss_dssp TTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHHTSSSCSEEEEEECCCTTCCBTTBCTTCH
T ss_pred hHHHHHHHHHHhhccCCCChhhEEecCCcccccCCCHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCCCEEEcCCCCh
Confidence 665 689999999999999999998864 5899999999999997 7899999999999999999999997
Q ss_pred CCCcc--eEEECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCCC
Q psy10371 147 LASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPSG 219 (219)
Q Consensus 147 ~~~~~--~~v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa~ 219 (219)
+.+.+ +++.+. +++++|++|||||+++|++||+|+|+ +|++|+++++++++|+. .++||.
T Consensus 165 ~~~~~~~~vv~~~-------------~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas 228 (248)
T 3oc6_A 165 AVRETERLVVGVS-------------DSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGADPVDIPAA 228 (248)
T ss_dssp HHHCSSCSEEEES-------------CCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTTSGGG
T ss_pred hhccCcceEEEec-------------CCCCCCCcEEEcCHHHHHhhCeEEEEEeCHHHHHHHHHHHcCCCCCCCChH
Confidence 54333 344432 46788999999999999999999999 99999999999999874 578873
No 6
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=100.00 E-value=8.6e-57 Score=373.05 Aligned_cols=198 Identities=15% Similarity=0.166 Sum_probs=175.8
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
|++++|+|.+++++.+|++|++.+++++++ +++++|+||||+||+.+|+.|++ .++||+||++|++|||+ ++|
T Consensus 6 m~~~i~~~~~~l~~~~A~~i~~~i~~~i~~-~~~~~l~lsgGstp~~~y~~L~~----~~idw~~v~~f~~DEr~vp~~~ 80 (233)
T 3nwp_A 6 TVFKSFDTPSALEQQLASKIASQLQEAVDA-RGKASLVVSGGSTPLKLFQLLSM----KSIDWSDVYITLADERWVEADA 80 (233)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHHHHHHHHH-HSCEEEEECCSSTTHHHHHHHHH----CCSCGGGEEEEESEEESSCTTS
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEcCCCCHHHHHHHHHh----cCCChhHeEEEeCeecccCCCC
Confidence 789999999999999999999999998876 88999999999999999999997 78999999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhC-CccEEEEeecCCCcccccCCCCCC-C----C
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAG-GIHLFVGGIGPDGHIAFNEPGSSL-A----S 149 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~-~~Dl~lLG~G~DGHiaslfP~~~~-~----~ 149 (219)
||+ +|+++||+++++ +.+++++++...+++++|++|++.|++.+ +||++|||||+||||||||||++. . +
T Consensus 81 ~~Sn~~~~~~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~ye~~i~~~~~~~Dl~lLG~G~dGHias~fPg~~~L~~~~~~ 159 (233)
T 3nwp_A 81 DASNERLVREHLLQNRAS-NAKFRGLKNMFSTAEAGADMAAESLSNFPRPFDVVVLGMGNDGHTCSWFPCSAELENALTT 159 (233)
T ss_dssp TTCHHHHHHHHTSSGGGG-GSEECCSCCSSSSHHHHHHHHHHHTTTSCSSBSEEEECCCTTSCBTTBCTTCTTHHHHHHC
T ss_pred hHHHHHHHHHHhhccCCc-cceEEcCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEccCCCCCeeecCCCCchhhhhccc
Confidence 665 689999999874 57888877776799999999999999998 999999999999999999999872 1 2
Q ss_pred cceEEECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCC
Q psy10371 150 RTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPS 218 (219)
Q Consensus 150 ~~~~v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa 218 (219)
.++++.+ +.+++|++|||||+++|++||+|+|+ +|++|+++++++++|+. .++||
T Consensus 160 ~~~~~~~--------------~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pa 216 (233)
T 3nwp_A 160 QALCVAT--------------NPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHAMPI 216 (233)
T ss_dssp CSSEEEE--------------CCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTTCTT
T ss_pred CceEEEC--------------CCCCCCCceEECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCCCCCccH
Confidence 2334332 35788999999999999999999999 99999999999999864 57997
No 7
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=100.00 E-value=2.4e-56 Score=370.29 Aligned_cols=204 Identities=14% Similarity=0.140 Sum_probs=174.4
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
|++++|+|++++++.+|++|++.+++++++ +++++|+||||+||+.+|+.|++ .++||+||++|++|||+ ++|
T Consensus 3 m~i~i~~~~~~l~~~~A~~i~~~i~~~i~~-~~~~~l~lsgGstp~~~y~~L~~----~~i~w~~v~~f~~DEr~vp~~~ 77 (232)
T 3lhi_A 3 FVWHEYENAAEAAQSLADAVADALQGALDE-KGGAVLAVSGGRSPIAFFNALSQ----KDLDWKNVGITLADERIVPTNH 77 (232)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHH-HSCEEEEECCSSTTHHHHHHHHT----SCCCGGGEEEEESEEESSCTTS
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHHHHh----cCCCchheEEEEeeeccCCCCC
Confidence 799999999999999999999999988876 88999999999999999999996 68999999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHH--HHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceE
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNAPDLH--AECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRL 153 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~--~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~ 153 (219)
||+ +|+++||+++++ +.+++++.+...+++ ++|++|++.|++.++||++|||||+||||||||||++.....
T Consensus 78 ~~Sn~~~~~~~ll~~~~~-~~~~~p~~~~~~~~~~~~~~~~ye~~i~~~~~~Dl~lLG~G~dGH~as~fPg~~~l~~~-- 154 (232)
T 3lhi_A 78 ADSNTGLVREYLLKNKAA-AAVWIPMVEDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTA-- 154 (232)
T ss_dssp TTCHHHHHHHHTSSGGGG-GSEECCSSCTTCCGGGCCHHHHHHHHHHHCCCCSEEEECCCTTSCBTTBCTTCTTHHHH--
T ss_pred hHHHHHHHHHHhccCCCc-cceEecCCCCCCChhhHHHHHHHHHHHhhCCCCCEEEEccCCCCCeeecCCCChhhhhh--
Confidence 665 689999999874 566666656556888 999999999999999999999999999999999998753110
Q ss_pred EECchhhHHHhh-cccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCCCCCCC
Q psy10371 154 KTLAQETLEANA-RFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRTNIIPS 218 (219)
Q Consensus 154 v~l~~~t~~~~~-~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~~~~Pa 218 (219)
+...+. +++..+.+++|++|||||+++|++||+|+|+ +|++|+++++++++|+..++||
T Consensus 155 ------~~~~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~Pa 215 (232)
T 3lhi_A 155 ------IDGSAGVALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPI 215 (232)
T ss_dssp ------HCCTTCCCEEEECCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTSCCTTSTH
T ss_pred ------hccccCcEEEeCCCCCCCCceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhCCCccCcH
Confidence 000011 2232246788999999999999999999999 9999999999999996567986
No 8
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=100.00 E-value=6.2e-56 Score=374.61 Aligned_cols=201 Identities=18% Similarity=0.198 Sum_probs=179.2
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCC-CceeEEeecccc--cch
Q psy10371 2 RLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISF-KYVKTFNMDEYG--RNF 78 (219)
Q Consensus 2 ~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w-~~v~~~~~DE~v--~~~ 78 (219)
++++++|++++++.+|++|++.|++++++ +++++|+||||+||+.+|+.|++.++. .+|| +||++||+|||+ ++|
T Consensus 6 ~i~i~~~~~~l~~~~A~~i~~~i~~~i~~-~~~~~l~LsgGstP~~ly~~L~~~~~~-~idw~~~v~~f~~DEr~vp~~~ 83 (266)
T 3eb9_A 6 TISVHATPQELSAAGCRKIVEIIEASGSQ-QWPLSIALAGGSTPKMTYARLHDEHLN-LLREKRALRFFMGDERMVPADS 83 (266)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHCGG-GCSEEEEECCSHHHHHHHHHHHHHHHH-HHTTSCCEEEEESEEESSCTTS
T ss_pred eEEEeCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEcCCCCHHHHHHHHHHHhhc-CCChHHcEEEEeeeeeccCCCC
Confidence 58999999999999999999999998886 899999999999999999999976554 7999 999999999976 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCH---------HHHHHHHHHHHHHhC-------------CccEEEEeec
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNAPDL---------HAECVQYEKDIKEAG-------------GIHLFVGGIG 133 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~---------~~~~~~y~~~i~~~~-------------~~Dl~lLG~G 133 (219)
||+ +|+++||+ +||++|+|++++...++ +++|++|++.|++.+ +||++|||||
T Consensus 84 ~~Sn~~~~~~~ll~--~i~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~~g~~~~~p~~Dl~lLGmG 161 (266)
T 3eb9_A 84 TDSNYNMAREVLLH--DIPDDLVFPFDTSAVTPSAEATSADAMRVAEAYGKQLASLLPLKSVGEAGPKVPVFDVVLLGLG 161 (266)
T ss_dssp TTCHHHHHHHHTGG--GSCGGGEECCCCTTCCTTSCCCHHHHHHHHHHHHHHHHHHSCEEETTTTSCEEECCSEEEECCC
T ss_pred hHHHHHHHHHHhhc--CCCHHHEEeCCCccCChhhccccCcHHHHHHHHHHHHHHhccccccccccccCCCCCEEEEccC
Confidence 666 67999999 88999999999986688 999999999999874 7999999999
Q ss_pred CCCcccccCCCCCC-CCc--ceEEECchhhHHHhhcccCCCCC--CCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhh
Q psy10371 134 PDGHIAFNEPGSSL-ASR--TRLKTLAQETLEANARFFDNDIK--KVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRK 207 (219)
Q Consensus 134 ~DGHiaslfP~~~~-~~~--~~~v~l~~~t~~~~~~~~~~~~~--~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~ 207 (219)
+||||||||||+++ .+. +++|.++ + +++ ++|++|||||+++|++||+|+|+ +|++|++++++
T Consensus 162 ~DGH~as~fPg~~~l~~~~~~~~v~~~----------~--~~~~~~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~ 229 (266)
T 3eb9_A 162 SDGHTASIFPGSQAEKETDGKVVVSVG----------F--PSETMKPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDG 229 (266)
T ss_dssp TTSCBTTBCTTCSGGGCCSSSCSEEEE----------C--CCTTCSSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHH
T ss_pred CCCCeeecCCCCcccccCCCccEEEec----------C--CCcccCCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHH
Confidence 99999999999985 444 7777643 1 145 88999999999999999999999 99999999999
Q ss_pred hhCCCC-CCCCC
Q psy10371 208 PAVPRT-NIIPS 218 (219)
Q Consensus 208 ~l~~~~-~~~Pa 218 (219)
+++|+. ..+||
T Consensus 230 ~l~g~~~~~~pA 241 (266)
T 3eb9_A 230 ILADTAHKAPVA 241 (266)
T ss_dssp HHCSSCSSCCGG
T ss_pred HHhCCCCccchh
Confidence 999985 46775
No 9
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=100.00 E-value=3.1e-55 Score=375.71 Aligned_cols=213 Identities=18% Similarity=0.235 Sum_probs=180.2
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHh--hCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--c
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITD--FKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--R 76 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~--~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~ 76 (219)
|++++++|++++++++|++|++.|.+ ++++ +++++|+|||||||+.+|+.|+. ++..++||++|++|++|||+ .
T Consensus 27 Mkiii~~d~~~ls~~aA~~i~~~I~~~~~~~~-~~~~~l~LsgGsTP~~ly~~L~~-~~~~~idw~~V~~f~~DEr~vp~ 104 (312)
T 3e15_A 27 VKYLEAKDLTDFNQKSAYYICHQIAEKQLSKE-GGHVVIGLSGGKTPIDVYKNIAL-VKDIKIDTSKLIFFIIDERYKRD 104 (312)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHHST-TCCCEEEECCSHHHHHHHHHHTT-CCSSCCCGGGCEEEESEEECCTT
T ss_pred eeEEEeCCHHHHHHHHHHHHHHHHHhhhhhhh-CCCEEEEEeCCCCHHHHHHHHHH-hhccCCCccceEEEEeeeecCCC
Confidence 89999999999999999999999976 3554 78999999999999999999995 55578999999999999987 5
Q ss_pred ch--HHHHHHHhcCCCCCCCC-CCeEeCCCCCCCHHHHHHHHHHHHH----HhCCccEEEEeecCCCcccccCCCCCCCC
Q psy10371 77 NF--LTKLFRHNFFSHIDIQP-ENVHILDGNAPDLHAECVQYEKDIK----EAGGIHLFVGGIGPDGHIAFNEPGSSLAS 149 (219)
Q Consensus 77 ~~--~~~~~~~~l~~~~~i~~-~~i~~~~~~~~~~~~~~~~y~~~i~----~~~~~Dl~lLG~G~DGHiaslfP~~~~~~ 149 (219)
+| ||+.+.++||++++|++ +|+|.+++. .+++++|++|++.|+ +.|+||++|||||+||||||||||+++.+
T Consensus 105 d~~~Sn~~~~~~l~~~v~i~~~~~i~~~~g~-~d~~~~a~~Ye~~I~~~~~~~g~~DL~LLGiG~DGHiaslfPg~~~~~ 183 (312)
T 3e15_A 105 DHKFSNYNNIKFLFESLKINEKEQLYRPDTS-KNIVECVRDYNEKIKNMVKKYTKVDIAILGMGSDFHIASLFPNIFFNI 183 (312)
T ss_dssp CCTTCHHHHHHHHHHHTTCCHHHHEECCCTT-SCHHHHHHHHHHHHHHHHHHHCSCCEEEECCCTTSCBTTBCSSHHHHH
T ss_pred CChHHHHHHHHHHHhcCCCCccccEEcCCCC-cCHHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCceeecCCCCcccc
Confidence 66 77654359999999987 799999985 689999999999997 56899999999999999999999986532
Q ss_pred ------cceEEECchhhHH-H---------------hhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHh
Q psy10371 150 ------RTRLKTLAQETLE-A---------------NARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLR 206 (219)
Q Consensus 150 ------~~~~v~l~~~t~~-~---------------~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~ 206 (219)
.|++ +.+.|+. . +.++|.++.+++|++|||||+++|++||+|+|+ +|++|+++|+
T Consensus 184 ~~~~~~~t~~--l~e~t~~~~~~~~s~~~~~~~~~~~~~~f~~~~~~pP~~rITlt~~~I~~Ak~v~~lv~G~~Ka~av~ 261 (312)
T 3e15_A 184 YMNNYQNSYI--YDESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGNASSKIFLLNSTDKLDLWK 261 (312)
T ss_dssp HHHHTGGGSS--SCGGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHTCSEEEEEECSHHHHHHHH
T ss_pred ccccccccee--ecHHHHHHhhcccccccccccccccceeeccCCCCCCCeEEEecHHHHhcCCeEEEEEcChHHHHHHH
Confidence 3443 2233321 1 124566667888899999999999999999999 9999999999
Q ss_pred hhhC-CCC-C---CCCC
Q psy10371 207 KPAV-PRT-N---IIPS 218 (219)
Q Consensus 207 ~~l~-~~~-~---~~Pa 218 (219)
++++ |+. . .+||
T Consensus 262 ~~l~~g~vt~~~~~~PA 278 (312)
T 3e15_A 262 NMLLKSYVDVNYCLYPA 278 (312)
T ss_dssp HHHHHTTTTCCTTTCHH
T ss_pred HHHHhCCCCCCcCccch
Confidence 9999 874 2 6886
No 10
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=100.00 E-value=3e-53 Score=351.58 Aligned_cols=195 Identities=20% Similarity=0.262 Sum_probs=176.7
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch-
Q psy10371 2 RLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF- 78 (219)
Q Consensus 2 ~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~- 78 (219)
++++++|++++++++|++|.+.+++++++ ++.++|+||||+||..+|+.|++ ..+||++|++|++|||+ ++|
T Consensus 15 ~~~~~~~~~~l~~~aA~~i~~~i~~~~~~-~~~~~l~LsgGsTp~~ly~~L~~----~~i~w~~v~~f~~DEr~vp~~~~ 89 (232)
T 1vl1_A 15 KTVIYLLEDGYVDFVVEKIRTKMEKLLEE-KDKIFVVLAGGRTPLPVYEKLAE----QKFPWNRIHFFLSDERYVPLDSD 89 (232)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHHH-CSCEEEEECCSTTHHHHHHHHTT----SCCCGGGEEEEESEEESSCTTST
T ss_pred eEEEeCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcCCccHHHHHHHHHH----cCCChhHEEEEeCeEeecCCCCh
Confidence 57899999999999999999999998876 88899999999999999999996 57999999999999977 566
Q ss_pred -HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHH-hCCccEEEEeecCCCcccccCC-CCCC-CCcceE
Q psy10371 79 -LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKE-AGGIHLFVGGIGPDGHIAFNEP-GSSL-ASRTRL 153 (219)
Q Consensus 79 -~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~-~~~~Dl~lLG~G~DGHiaslfP-~~~~-~~~~~~ 153 (219)
||+ +|+++||++++++++|+|++++. .+++++|++|++.|++ .++||++|||||+||||||||| ++++ .+.+++
T Consensus 90 ~Sn~~~~~~~l~~~v~i~~~~i~~~~~~-~~~e~~~~~y~~~i~~~~~~~Dl~lLGiG~dGH~aslfP~g~~~l~~~~~~ 168 (232)
T 1vl1_A 90 QSNFRNINEVLFSRAKIPSGNVHYVDTS-LPIEKACEKYEREIRSATDQFDLAILGMGPDGHVASIFDLETGNKDNLVTF 168 (232)
T ss_dssp TCHHHHHHHHTTTTSCCCGGGEECCCTT-SCHHHHHHHHHHHHHHHCSSCSEEEECCCTTSCBTTBCSHHHHTCSSSEEE
T ss_pred HHHHHHHHHHHhccCCCCHHHEecCCCC-CCHHHHHHHHHHHHHhcCCCCCEEEEecCCCCchhhccCCCCcccccCCcE
Confidence 665 68999999999999999999987 5899999999999998 8899999999999999999999 9874 666666
Q ss_pred EECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCCCCCCCC
Q psy10371 154 KTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRTNIIPSG 219 (219)
Q Consensus 154 v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~~~~Pa~ 219 (219)
|. +.+++|.+|||||+++|++||+|+|+ +|++|+++++++++|+ .+||.
T Consensus 169 v~---------------~~~~~p~~rITltl~~I~~A~~iilla~G~~Ka~av~~~l~g~--~~Pas 218 (232)
T 1vl1_A 169 TD---------------PSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT--PLPAY 218 (232)
T ss_dssp CS---------------SBTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC--CCGGG
T ss_pred Ee---------------cCCCCCCCEEECCHHHHHhCCEEEEEEcCHHHHHHHHHHHhCC--CCChH
Confidence 53 24678899999999999999999999 9999999999999985 38873
No 11
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=100.00 E-value=8.4e-53 Score=355.86 Aligned_cols=205 Identities=19% Similarity=0.183 Sum_probs=180.1
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
|++++++|++++++.+|++|.+.+++++++ ++.++|+||||+||..+|+.|++. +...+||++|++||+|||+ ++|
T Consensus 6 ~~~~~~~~~~~l~~~aA~~i~~~i~~a~~~-~~~~~l~LsgGstp~~ly~~L~~~-~~~~i~w~~v~~f~~DEr~vp~~~ 83 (267)
T 3css_A 6 PTVKICENLSQMSFAAREVILAAIDARVDK-SVPVVLALSGGSTPKRLYEELHEK-DLALLQQHAVQFILGDERLLSEDD 83 (267)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHHTCSST-TSCEEEEECCSSTTHHHHHHHHHH-SHHHHHTTCEEEEESEEESSCTTS
T ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHHHHHh-cccCCChhHeEEEeeeeeccCCCC
Confidence 789999999999999999999999998886 889999999999999999999986 5567999999999999977 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCC-----------CCHH-HHHHHHHHHHHHhC-------------CccEEEE
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNA-----------PDLH-AECVQYEKDIKEAG-------------GIHLFVG 130 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~-----------~~~~-~~~~~y~~~i~~~~-------------~~Dl~lL 130 (219)
||+ +|+++||++++ ++|+|++++.. .+++ ++|++|++.|++.+ +||++||
T Consensus 84 ~~Sn~~~~~~~ll~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~e~~~a~~Ye~~l~~~~~~~~~~~~~~~~p~~Dl~lL 161 (267)
T 3css_A 84 EQSNFSMATKALLRDVP--SSDVISIDRRAALATSKDEKGGLDGAWAVAQDYEVKLLNCLPCKQINGTAKSVPVVDIVLL 161 (267)
T ss_dssp TTSHHHHHHHHTGGGSC--GGGBCCCCCHHHHTTTTCTTTTHHHHHHHHHHHHHHHHHHSCEEECTTSSCEEECCSEEEE
T ss_pred HHHHHHHHHHHHhccCC--HHHEEeCCCchhccccccccccCChhHHHHHHHHHHHHHhcCccccccccCCCCCCCEEEE
Confidence 665 68999999998 77999998764 3788 99999999999864 6999999
Q ss_pred eecCCCcccccCCCCC-CCCcceEEECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhh
Q psy10371 131 GIGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKP 208 (219)
Q Consensus 131 G~G~DGHiaslfP~~~-~~~~~~~v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~ 208 (219)
|||+|||||||||+++ +.+.+++|.+. +| .+.+++|.+|||||+++|++||+|+|+ +|++|+++++++
T Consensus 162 GiG~dGH~aslfP~~~~L~~~~~~v~~~---------~~-~~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~ 231 (267)
T 3css_A 162 GFGSDGHTASIFPDSVAATDEEHVVSVS---------FP-SPTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGV 231 (267)
T ss_dssp ECCTTSCBTTBCTTSGGGGCCSCSEEEE---------CC-CTTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHH
T ss_pred CCCCCccceeCCCCCcccCCCCcEEEee---------cc-cCCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHH
Confidence 9999999999999998 56666665421 21 145778899999999999999999999 999999999999
Q ss_pred hCCCC-CCCCCC
Q psy10371 209 AVPRT-NIIPSG 219 (219)
Q Consensus 209 l~~~~-~~~Pa~ 219 (219)
++|++ ..+||.
T Consensus 232 l~g~~~~~~Pas 243 (267)
T 3css_A 232 LSESPTDPLPVS 243 (267)
T ss_dssp HCSSCCSSCCGG
T ss_pred HcCCCCCcCCHH
Confidence 99875 569973
No 12
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=100.00 E-value=3.6e-51 Score=349.55 Aligned_cols=218 Identities=62% Similarity=1.030 Sum_probs=198.7
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc---cc
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG---RN 77 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v---~~ 77 (219)
|++++++|.+++++.+|++|.+.+++++.++++.++|+|+||+||..+|+.|++.++...++|++|++|++|||+ ++
T Consensus 1 m~i~i~~~~~~la~~aA~~i~~~i~~~~~~~~~~~~lglsgGsTp~~~~~~L~~~~~~~~i~~~~v~v~~lDEr~gv~~~ 80 (289)
T 1ne7_A 1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRD 80 (289)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHHHHHHHHHHHHHHHTTSCCCTTEEEEESEEETTSCTT
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEcCCccHHHHHHHHHhhhhccCCCchheEEEeCceeecCCCC
Confidence 899999999999999999999999987654356699999999999999999998887788999999999999986 55
Q ss_pred h--HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEE
Q psy10371 78 F--LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 154 (219)
Q Consensus 78 ~--~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v 154 (219)
| ||+ +++++|+++++++++|+|.+++..++++++|..|++.|+..++||++|||||+|||+|||||++++.+.++++
T Consensus 81 ~~~Sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~e~~~~~ye~~i~~~~~~Dl~lLGiG~dGH~aslfPg~~l~~~~~~~ 160 (289)
T 1ne7_A 81 HPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVK 160 (289)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHTTSCSEEEECCCTTCCSTTCCTTCCTTCCSEEE
T ss_pred cHHHHHHHHHHHhhccCCCCHHHEecCCCCCCCHHHHHHHHHHHHHhcCCCCEEEEccCCCCcceecCCCCCCccccceE
Confidence 5 665 6899999999999999999987667899999999999999999999999999999999999999888888999
Q ss_pred ECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCC
Q psy10371 155 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPS 218 (219)
Q Consensus 155 ~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa 218 (219)
.+...|+..+.++|..+.+.+|..+||||+++|++|++++++ +|++|+++++++++|+. ..+||
T Consensus 161 ~L~~~~~~~~~~~f~~~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~~~~~Pa 226 (289)
T 1ne7_A 161 TLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTV 226 (289)
T ss_dssp ECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGG
T ss_pred EcchhhhhhhhccccCCCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCCCccCch
Confidence 999888777788887667888999999999999999999999 99999999999999874 57886
No 13
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=100.00 E-value=8.8e-52 Score=344.29 Aligned_cols=199 Identities=17% Similarity=0.174 Sum_probs=174.8
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc--cch
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG--RNF 78 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v--~~~ 78 (219)
|++++++|++++++.+|++|.+.+++ ++.++|+||||+||..+|+.|++..+...+||++|++|++|||+ ++|
T Consensus 2 m~~~~~~~~~~l~~~aA~~i~~~i~~-----~~~~~l~lsgGstp~~~~~~L~~~~~~~~~~w~~v~~f~~DEr~vp~~~ 76 (238)
T 1y89_A 2 INHKIFPTADAVVKSLADDMLAYSQQ-----GQPVHISLSGGSTPKMLFKLLASQPYANDIQWKNLHFWWGDERCVAPDD 76 (238)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-----SSCEEEEECCSHHHHHHHHHHTSTTHHHHSCGGGEEEEESEEESSCTTS
T ss_pred ceEEEeCCHHHHHHHHHHHHHHHHHh-----CCCEEEEECCCccHHHHHHHHHhhhhccCCChhHeEEEeceecCCCCCC
Confidence 79999999999999999999999876 56799999999999999999997544456999999999999977 666
Q ss_pred --HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHh-------CCccEEEEeecCCCcccccCCCCCCC
Q psy10371 79 --LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEA-------GGIHLFVGGIGPDGHIAFNEPGSSLA 148 (219)
Q Consensus 79 --~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~-------~~~Dl~lLG~G~DGHiaslfP~~~~~ 148 (219)
||+ +|+++||++++++++|+|++++. .+++++|++|++.|++. ++||++|||||+|||||||||++ +.
T Consensus 77 ~~Sn~~~~~~~l~~~~~~~~~~i~~~~~~-~~~~~~~~~y~~~l~~~~~~~~~~~~~Dl~lLGiG~dGH~aslfP~~-l~ 154 (238)
T 1y89_A 77 AESNYGEANALLFSKINMPAQNIHRILGE-NEPQAEAERFAQAMAHVIPTENGTPVFDWILLGVGADGHTASLFPGQ-TD 154 (238)
T ss_dssp TTCHHHHHHHHTGGGSCCCGGGBCCCCTT-SCHHHHHHHHHHHHHHHSCEETTEECCSEEEECCCTTSCBTTBCTTT-CC
T ss_pred HHHHHHHHHHHhhccCCCCHHHEEeCCCC-CCHHHHHHHHHHHHHHhhcccCCCCCCCEEEECCCCCCceeecCCCC-CC
Confidence 666 68999999999999999999985 58999999999999987 26999999999999999999999 77
Q ss_pred CcceEEECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC--CCCCCC
Q psy10371 149 SRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR--TNIIPS 218 (219)
Q Consensus 149 ~~~~~v~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~--~~~~Pa 218 (219)
+.+++|.. ++ +.+++|.+|||||+++|++||+|+++ +|++|+++++++++++ ...+||
T Consensus 155 ~~~~~v~~----------~~--~~~~~p~~rITltl~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~~~~~Pa 215 (238)
T 1y89_A 155 YADANLSV----------VA--SHPESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPA 215 (238)
T ss_dssp TTCCSSEE----------EE--ECTTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGCCCHH
T ss_pred CCCcEEEe----------cc--CCCCCCCCeEECCHHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCCCccCCH
Confidence 76676541 11 23567899999999999999999999 9999999999999985 356886
No 14
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=100.00 E-value=9e-49 Score=330.88 Aligned_cols=218 Identities=54% Similarity=0.901 Sum_probs=197.1
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc---cc
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG---RN 77 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v---~~ 77 (219)
|++++++|.+++++.+|++|.+.++++++++++.++|+|+||+||..+|+.|++.++..+++|++|++|++|||+ ++
T Consensus 1 m~~~~~~~~~~l~~~aA~~l~~~l~~~~~~~~~~~~i~lsgGsTp~~~~~~L~~~~~~~~~~~~~v~v~~ldEr~gv~~~ 80 (266)
T 1fs5_A 1 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKE 80 (266)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHHHhhhcccCceEEEEcCCCCHHHHHHHHHHHhhcCCCChHHeEEEeCeeccCCCCC
Confidence 899999999999999999999999987733377899999999999999999998877788999999999999965 55
Q ss_pred h--HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEE
Q psy10371 78 F--LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 154 (219)
Q Consensus 78 ~--~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v 154 (219)
| ||+ +++++|++++++++.++|.+++..++++++|..|++.|+..++||++|||||+|||+|||||++++.+.++++
T Consensus 81 ~~~sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~e~~~~~y~~~l~~~~~~Dl~llGiG~dGh~asl~pg~~~~~~~~~~ 160 (266)
T 1fs5_A 81 HPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK 160 (266)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHHCCCSEEEECCCTTCCSTTCCSSCCTTCCSEEE
T ss_pred CHHHHHHHHHHHhhccCCCCHHHEEeCCCCCCCHHHHHHHHHHHHHhcCCCCEEEEccCCCCCeeecCCCCCCCccccEE
Confidence 5 665 6799999999999999999987666899999999999999999999999999999999999999888888999
Q ss_pred ECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCC
Q psy10371 155 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPS 218 (219)
Q Consensus 155 ~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa 218 (219)
.+...+...+.++|..+.+.+|+.+||||++.|++|++++++ +|++|+++++++++++. ..+||
T Consensus 161 ~l~~~~~~~~~~~f~~~~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pa 226 (266)
T 1fs5_A 161 TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTI 226 (266)
T ss_dssp ECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCCSSSGG
T ss_pred EechhhhhhhhccccCCcCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCCCCcCCh
Confidence 999888877788886566777888999999999999999999 99999999999999874 56886
No 15
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=100.00 E-value=3.8e-48 Score=322.62 Aligned_cols=213 Identities=38% Similarity=0.632 Sum_probs=191.9
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc---cc
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG---RN 77 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v---~~ 77 (219)
|++++++|.+++++.+|++|.+.+++ ++.++|+|+||+||..+|+.|.+.++...++|++|++|++|||+ .+
T Consensus 1 m~~~~~~~~~~l~~~aA~~l~~~i~~-----~~~~~i~lsgG~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~gv~~~ 75 (242)
T 2bkx_A 1 MKVMECQTYEELSQIAARITADTIKE-----KPDAVLGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSD 75 (242)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHH-----CTTCEEEECCSSTTHHHHHHHHHHHHHSCCCCTTCEEEESEEETTCCTT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHHH-----CCCeEEEECCCCCHHHHHHHHHHHhhccCCChhheEEEeCccccCCCCC
Confidence 89999999999999999999999986 55699999999999999999998777778999999999999965 55
Q ss_pred h--HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEE
Q psy10371 78 F--LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 154 (219)
Q Consensus 78 ~--~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v 154 (219)
| +|+ +++++|++++++++.|+|.+++...+++++|..|++.|+..++||++|||||+|||+|||||++++.+.++++
T Consensus 76 ~~~sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~~~~~~~y~~~i~~~~~~Dl~llGiG~dgh~a~l~p~~~~~~~~~~~ 155 (242)
T 2bkx_A 76 DPNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVV 155 (242)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSCHHHHHHHHHHHHHHTTSCSEEEECCCTTSCBTTBCTTCCTTCCSEEE
T ss_pred chHHHHHHHHHHHhccCCCCHHHEEcCCCCCCCHHHHHHHHHHHHHhcCCCCEEEECcCCCCcceeCCCCCccccCceEE
Confidence 5 665 6799999999999999999987557899999999999999889999999999999999999999888788888
Q ss_pred ECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCCC
Q psy10371 155 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPSG 219 (219)
Q Consensus 155 ~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa~ 219 (219)
.+.+.+...+.++|. +.+++|.+|||||++.|++|++++++ +|++|+++++++++++. ..+||.
T Consensus 156 ~L~~~~~~~~~~~~~-~~~~~p~~~itltl~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas 221 (242)
T 2bkx_A 156 TLNEQTRQANARYFP-SIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPAS 221 (242)
T ss_dssp ECCHHHHHHHGGGSS-SGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCCCTTSGGG
T ss_pred eCCHHHHHHHhhhcC-CCCCCCCccEEcCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCcccHH
Confidence 898888776667786 35677899999999999999999999 99999999999999874 578873
No 16
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=100.00 E-value=3.9e-45 Score=303.10 Aligned_cols=205 Identities=30% Similarity=0.503 Sum_probs=180.2
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc---cc
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG---RN 77 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v---~~ 77 (219)
|++++++|.+++++.+|++|.+.+++ ++. +|+|+||+||..+|+.|.+ .+++|++|+||++|||+ ++
T Consensus 2 m~~~~~~~~~~l~~~aA~~l~~~i~~-----~~~-~i~ls~G~T~~~~~~~L~~----~~~~~~~v~v~~ldEr~gv~~~ 71 (234)
T 2ri0_A 2 MKTIKVKNKTEGSKVAFRMLEEEITF-----GAK-TLGLATGSTPLELYKEIRE----SHLDFSDMVSINLDEYVGLSAD 71 (234)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHT-----TCC-EEEECCSSTTHHHHHHHHT----SCCCCTTCEEEESEEETTCCTT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHHh-----CCC-EEEEcCCCCHHHHHHHHHh----cCCChhheEEEeCeeecCCCCC
Confidence 89999999999999999999999975 445 9999999999999999995 56999999999999974 55
Q ss_pred h--HHH-HHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEE
Q psy10371 78 F--LTK-LFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 154 (219)
Q Consensus 78 ~--~~~-~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v 154 (219)
| +|+ +++++|++++++++. |.+.+...+++++|..|++.|++ ++||++|||||+|||+|||||++++.+.++++
T Consensus 72 ~~~sn~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~y~~~i~~-~~~Dl~llGiG~dgh~a~l~p~~~~~~~~~~~ 148 (234)
T 2ri0_A 72 DKQSYAYFMKQNLFAAKPFKKS--YLPNGLAADLAKETEYYDQILAQ-YPIDLQILGIGRNAHIGFNEPGTAFSSQTHLV 148 (234)
T ss_dssp STTSHHHHHHHHTTTTSCCSEE--ECCCTTCSCHHHHHHHHHHHHHH-SCCSEEEECCCTTSCBTTBCTTCCTTCCSEEE
T ss_pred ChHHHHHHHHHHHhccCCCcHh--hcCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEccCCCCCchhcCCCCCCCCCceEE
Confidence 5 555 679999999998777 44555456899999999999999 89999999999999999999999888888899
Q ss_pred ECchhhHHHhhcccCCCCCCCCCceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCCC-CCCCCC
Q psy10371 155 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPRT-NIIPSG 219 (219)
Q Consensus 155 ~l~~~t~~~~~~~~~~~~~~~p~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~~-~~~Pa~ 219 (219)
.+.+.+...+.++|+. .+.+|.+|||||++.|++|++++++ +|++|++++++++.|+. ..+||.
T Consensus 149 ~l~~~~~~~~~~~fd~-~~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas 214 (234)
T 2ri0_A 149 DLTPSTIAANSRFFEK-AEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPAS 214 (234)
T ss_dssp ECCHHHHHHHHTTCSC-GGGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCTTSGGG
T ss_pred ECCHHHHHHhhhhcCC-ccCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCccchH
Confidence 9987777777888864 3557899999999999999999999 99999999999999874 578873
No 17
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.93 E-value=2.9e-27 Score=198.25 Aligned_cols=195 Identities=10% Similarity=0.042 Sum_probs=157.5
Q ss_pred CEEEEeCC--------HHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeec
Q psy10371 1 MRLIILDD--------VSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMD 72 (219)
Q Consensus 1 m~i~v~~~--------~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~D 72 (219)
++++|.++ .+++++.+|+++.+.++. ..+|+|++|+||..+|+.|.+ .++|+++.|+++|
T Consensus 23 ~~viVv~~~~~~~~~~~~~l~~~aA~~l~~~l~~-------~~viGla~G~T~~~~~~~l~~-----~~~~~~v~~v~L~ 90 (255)
T 2okg_A 23 KDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSG-------KNIVAVTGGTTIEAVAEMMTP-----DSKNRELLFVPAR 90 (255)
T ss_dssp SEEEEESSCTTTCTHHHHHHHHHHHHHHHHHCCS-------EEEEEECCSHHHHHHHHHCCC-----CTTCCEEEEEESE
T ss_pred CeEEEECCCCCchhHHHHHHHHHHHHHHHHhCCC-------CCEEEECCcHHHHHHHHhhcc-----ccCCCCCEEEECC
Confidence 45667765 577888888888887652 379999999999999999973 3589999999999
Q ss_pred ccc-cch---HHHHHHHhcCCCCCCCCCCeEeCCCCCC---CHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCC
Q psy10371 73 EYG-RNF---LTKLFRHNFFSHIDIQPENVHILDGNAP---DLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGS 145 (219)
Q Consensus 73 E~v-~~~---~~~~~~~~l~~~~~i~~~~i~~~~~~~~---~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~ 145 (219)
+-+ . | +.++|.++|++++++++.++|.++...+ +...+|..|++.|+..++.|++|+|||.+||++ +|+
T Consensus 91 ggl~~-~~~~~~~~~~~~la~~~~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~Di~l~GIG~~~~i~--~~g- 166 (255)
T 2okg_A 91 GGLGE-DVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKTMA--QRR- 166 (255)
T ss_dssp EECC----CCHHHHHHHHHHHHHTCEECCCCCCCSCCHHHHHHHHTSHHHHHHHHHHHTCSEEEECCEEHHHHH--HHT-
T ss_pred CCCCC-CcccCHHHHHHHHHHHHCCeeEEEeccccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCchhhh--hcC-
Confidence 977 6 5 5567899999999999999998877531 222568899999999889999999999999997 787
Q ss_pred CCCCcceEEECchhhH--HHhhcccCCCCCCCC-CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 146 SLASRTRLKTLAQETL--EANARFFDNDIKKVP-KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 146 ~~~~~~~~v~l~~~t~--~~~~~~~~~~~~~~p-~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
+.+.++++.|.+.+. ..+.++|..+...+| .+.||||+..|++++++|++ .|++|+++++.++.|+
T Consensus 167 -~~~~~~~~~L~~~~avg~~~~rffd~~G~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~ 236 (255)
T 2okg_A 167 -NTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKP 236 (255)
T ss_dssp -TCCHHHHHHHHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTSC
T ss_pred -CCCHHHHHHHHHCCeEEEeehhhhccCCCCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHHHhCC
Confidence 455566655654442 256678864445567 78999999999999999999 9999999999999987
No 18
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.91 E-value=1.9e-25 Score=188.06 Aligned_cols=188 Identities=14% Similarity=0.113 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEec-CCCCHHHHHHHHHHHhhcCCCCCC-ceeEEeecccccch---HHHHHH
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLP-TGGTPLGMYKKLIEYHQQGKISFK-YVKTFNMDEYGRNF---LTKLFR 84 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~ls-gGstp~~~y~~L~~~~~~~~i~w~-~v~~~~~DE~v~~~---~~~~~~ 84 (219)
+++++.+|+++.+.++. ..+|+|+ +|+||..+|+.|.+ ... |+ ++.|+++||-+.+| +.++|.
T Consensus 41 ~~l~~~aA~~l~~~l~~-------~~viGla~~G~T~~~~~~~l~~----~~~-~~~~v~~v~L~ggl~~~~~~~~~~~~ 108 (264)
T 2r5f_A 41 QAIGSAAAHYLETSLSA-------QDHIGISSWSSTIRAMVSHMHP----QPG-KQSAQEVVQLLGGVGNKGAFEATLLT 108 (264)
T ss_dssp HHHHHHHHHHHHHHCCT-------TCEEEECTTCHHHHHHHHTCCC------C-CCCCSEEEECEECCC--CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-------CCEEEECcchHHHHHHHHhhcc----ccC-CCCCcEEEECCCCCCCccccCHHHHH
Confidence 45667777777776542 2689999 99999999999985 222 57 99999999966433 445789
Q ss_pred HhcCCCCCCCCCCeEeCCCC----CCCHHHHHHHHHHHHHHhCCccEEEEeecCC---CcccccCCCCCCCCcceEEECc
Q psy10371 85 HNFFSHIDIQPENVHILDGN----APDLHAECVQYEKDIKEAGGIHLFVGGIGPD---GHIAFNEPGSSLASRTRLKTLA 157 (219)
Q Consensus 85 ~~l~~~~~i~~~~i~~~~~~----~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~D---GHiaslfP~~~~~~~~~~v~l~ 157 (219)
++|++++++.+.++|.+... ..+...+|..|++.|+..++.|++|+|||.+ ||+ ++ ||+ +.+.++++.|.
T Consensus 109 ~~la~~~~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~i-~~-~g~-~~~~~~~~~L~ 185 (264)
T 2r5f_A 109 QRLATLLNCPAFLLPSQSIEQSVESKQRIVEMEEVKEVLHRFDSITLAIVGIGELEPSQLL-RN-SGN-YYTEDMLRVLA 185 (264)
T ss_dssp HHHHHHHTSCEECCCCC----------CCHHHHHHHHHHHHTTTCCEEEECCEECC----------------------CT
T ss_pred HHHHHHhCCeeEEeeCCcccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCCCCCccH-hh-cCC-CCCHHHHHHHH
Confidence 99999999888888876542 2355678999999999999999999999987 999 87 886 77777888887
Q ss_pred hhhHH--HhhcccCCCCCCCC----CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 158 QETLE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 158 ~~t~~--~~~~~~~~~~~~~p----~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
+.+.. .+.++|..+...+| .+.||||+..|++++++|++ .|++|+++++.++.|+
T Consensus 186 ~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka~AI~aal~g~ 247 (264)
T 2r5f_A 186 ERGAVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGG 247 (264)
T ss_dssp TTTCCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTT
T ss_pred HCCcEEEeEhhhhccCCCCCCCccccceecCCHHHHcCCCCEEEEEcCHHHHHHHHHHHhcC
Confidence 66643 66788865545677 89999999999999999999 9999999999999987
No 19
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=99.90 E-value=1e-24 Score=183.80 Aligned_cols=188 Identities=12% Similarity=0.106 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cch---HHHHHHH
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNF---LTKLFRH 85 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~---~~~~~~~ 85 (219)
+++++.+|++|.+.++. ..+|+|++|+||..+|+.|.+ .+|+++.|+++|+-+ .+| +.++|.+
T Consensus 41 ~~l~~~aA~~l~~~l~~-------~~viGla~G~T~~~~~~~l~~------~~~~~v~~v~L~ggl~~~~~~~~~~~~~~ 107 (266)
T 2gnp_A 41 ERISQVAAGVLRNLIDD-------NMKIGFSWGKSLSNLVDLIHS------KSVRNVHFYPLAGGPSHIHAKYHVNTLIY 107 (266)
T ss_dssp HHHHHHHHHHHHHHCCT-------TCEEEECCSHHHHHHHHHCCC------CCCSSCEEEESBCCCTTSCGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-------CCEEEECChHHHHHHHHhccc------cCCCCCEEEECCCCCCCCccccCHHHHHH
Confidence 45677777777776642 268999999999999999984 489999999999977 554 4457899
Q ss_pred hcCCCCCCCCCCeEeCCCCCC----CHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccC-CCCCCCCcceEEECchhh
Q psy10371 86 NFFSHIDIQPENVHILDGNAP----DLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNE-PGSSLASRTRLKTLAQET 160 (219)
Q Consensus 86 ~l~~~~~i~~~~i~~~~~~~~----~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslf-P~~~~~~~~~~v~l~~~t 160 (219)
+|++++++++.++|.+..... +...+|..|++.|+..++.|++|+|||.+||-++.+ |+ +.+.++++.|.+.+
T Consensus 108 ~la~~~~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~~~~~g--~~s~~~~~~L~~~~ 185 (266)
T 2gnp_A 108 EMSRKFHGECTFMNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGDFSNKGKHQWLD--MLTEDDFKELTKVK 185 (266)
T ss_dssp HHHHHHTCEECCCCSCSBCSSHHHHHHHHTSTTTHHHHHHTTSCSEEEECCEECSHHHHHTTTT--TSCHHHHHHHHHTT
T ss_pred HHHHHhCCeeEEEeCCcccCCHHHHHHHHcCHHHHHHHHHHHhCCEEEEecCCCCCCCcchhcC--CCCHHHHHHHHHCC
Confidence 999999998888887765432 455678899999999999999999999999855443 33 45566665565444
Q ss_pred HH--HhhcccCCCCCCCC----CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 161 LE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 161 ~~--~~~~~~~~~~~~~p----~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
.. .+.++|..+...+| .+.||||+..|++++++|++ .|++|+++++.++.|+
T Consensus 186 avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~ 244 (266)
T 2gnp_A 186 TVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRAN 244 (266)
T ss_dssp CCEEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTT
T ss_pred eEEEEEchhhccCCCCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHHHHHhcC
Confidence 32 56788865556678 89999999999999999999 9999999999999987
No 20
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=99.86 E-value=1.9e-23 Score=182.07 Aligned_cols=190 Identities=11% Similarity=-0.006 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cch--HHHHHHHh
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNF--LTKLFRHN 86 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~--~~~~~~~~ 86 (219)
+++++.+|+++.+.|++ + ..+|+|++|+||..+|+.|.. ..++|+++++|.+|+-+ .+. +.++|.+.
T Consensus 125 ~~ia~~AA~~l~~~i~~-----~-~~~igl~~GsT~~~~~~~L~~----~~~~~~~v~vv~l~ggl~~~~~~~~~~i~~~ 194 (345)
T 2o0m_A 125 SDFGDVLTNTLNLLLPN-----G-ENTIAVMGGTTMAMVAENMGS----LETEKRHNLFVPARGGIGEAVSVQANSISAV 194 (345)
T ss_dssp HHHHHHHHHHHHHHCCS-----E-EEEEEECCSHHHHHHHHTCCC----CCCSSEEEEEEESBSCCCCCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCc-----C-CCEEEECCcHHHHHHHHHhhh----ccCCCCCcEEEEcCCcCCCCcccCHHHHHHH
Confidence 56777788777776642 2 378999999999999999874 22588999999999977 622 34468889
Q ss_pred cCCCCCCCCCCeEeCCCCCCC---HHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEEECchhhH--
Q psy10371 87 FFSHIDIQPENVHILDGNAPD---LHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETL-- 161 (219)
Q Consensus 87 l~~~~~i~~~~i~~~~~~~~~---~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v~l~~~t~-- 161 (219)
|++++++...++|.+....++ ....|..|++.|+..+++|++++|+|.+||++ .|| +.+.++++.+...+.
T Consensus 195 la~~~~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~~~i~--~~g--~~~~~~~~~L~~~~avg 270 (345)
T 2o0m_A 195 MANKTGGNYRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRALHMA--ARR--KMSDDEMVMLKQKNAVA 270 (345)
T ss_dssp HHHHHTCEECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEHHHHH--HHT--TCCHHHHHHHHHTTCCE
T ss_pred HHHHhCCceEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCchhhh--hcC--CCCHHHHHHHHHCCeEE
Confidence 999988888888777665321 12457899999999889999999999999987 777 455566555544432
Q ss_pred HHhhcccCCCCCCCC-CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCC-CC
Q psy10371 162 EANARFFDNDIKKVP-KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVP-RT 213 (219)
Q Consensus 162 ~~~~~~~~~~~~~~p-~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~-~~ 213 (219)
..+.++|+.+...+| .+.||||+..|++++++|++ .|++|+++++.++.| +.
T Consensus 271 ~~~~~ffd~~g~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g~~~ 325 (345)
T 2o0m_A 271 ESFGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNAPK 325 (345)
T ss_dssp EETTEEECTTSCEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTSCT
T ss_pred EeeccccccCCCCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhCCCC
Confidence 346678864445556 78999999999999999999 999999999999999 63
No 21
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=99.83 E-value=5.9e-22 Score=170.55 Aligned_cols=189 Identities=10% Similarity=0.033 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeeccccc--ch---HHHHHH
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYGR--NF---LTKLFR 84 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v~--~~---~~~~~~ 84 (219)
+++++.+|+++.+.|+. ..+|+|++|+||..+|+.|.. ..+|++++|+.+|.-+. +| +.++|.
T Consensus 93 ~~ia~~AA~~l~~~i~~-------~~~igl~~GsT~~~~~~~L~~-----~~~~~~~~vv~l~ggl~~~~~~~~~~~~i~ 160 (315)
T 2w48_A 93 SAMGQHGALLVDRLLEP-------GDIIGFSWGRAVRSLVENLPQ-----RSQSRQVICVPIIGGPSGKLESRYHVNTLT 160 (315)
T ss_dssp HHHHHHHHHHHHHHCCT-------TCEEEECCSHHHHHHHTTSCC-----CSSCCCCEEEESBCBCTTSSCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-------CCEEEECChHHHHHHHHhhcc-----ccCCCCcEEEEcCCCCCCCCccccCHHHHH
Confidence 56777777777776642 268999999999999999863 22788999999997432 23 344678
Q ss_pred HhcCCCCCCCCCCeEeCCCCCC----CHHHHHHHHHHHHHHhCCccEEEEeecCCCcccccCC-CCCCCCcceEEECchh
Q psy10371 85 HNFFSHIDIQPENVHILDGNAP----DLHAECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEP-GSSLASRTRLKTLAQE 159 (219)
Q Consensus 85 ~~l~~~~~i~~~~i~~~~~~~~----~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP-~~~~~~~~~~v~l~~~ 159 (219)
+.|++++++...+++.+..... +....|..|++.|+..+++|++++|+| ||++++-| ++++.+.++++.+...
T Consensus 161 ~~la~~~~~~~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG--g~~~~~g~~~~~~~~~~~~~~L~~~ 238 (315)
T 2w48_A 161 YGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIG--SPAIRDGANWHAFYGSEESDDLNAR 238 (315)
T ss_dssp HHHHHHTTCEECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCB--CTTCCSSSCHHHHHCTHHHHHHHHT
T ss_pred HHHHHHHCCceeEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccC--cchhhcCccccccCCHHHHHHHHHC
Confidence 8888988887777776554321 222467899999999999999999999 99999854 1123344454444443
Q ss_pred hH--HHhhcccCCCCCCCC----CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 160 TL--EANARFFDNDIKKVP----KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 160 t~--~~~~~~~~~~~~~~p----~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
+. ..+.++|..+...+| .+.||||+..|++++++|++ .|++|+++++.++.|+
T Consensus 239 ~avg~~~~rffd~~g~~v~~~~~~~~i~~~l~~i~~~~~ii~vA~G~~Ka~Ai~~al~g~ 298 (315)
T 2w48_A 239 HVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGR 298 (315)
T ss_dssp TEEEEETTEEEETTSCBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTT
T ss_pred CcEEEEECceECCCCCEeCCccccceecCCHHHHhCCCCEEEEecChHhHHHHHHHHhCC
Confidence 32 246678864445677 78999999999999999999 9999999999999987
No 22
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=99.56 E-value=1.4e-14 Score=121.88 Aligned_cols=185 Identities=11% Similarity=0.065 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cch--HH--HHHHH
Q psy10371 11 NVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNF--LT--KLFRH 85 (219)
Q Consensus 11 ~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~--~~--~~~~~ 85 (219)
+..+.+++..++.+.+.+.. ..+|++++|+|+..+++.|.. .+++++.|+.++.-+ .++ .. ..+.+
T Consensus 37 ~~~~~lg~~aA~~L~~~l~~---~~viGv~wG~T~~~v~~~l~~------~~~~~~~vV~l~Gg~~~~~~~~~~~n~i~~ 107 (267)
T 3nze_A 37 ETLDRVAMQAARTIGPLVDS---NAIIGVAWGATLSAVSRHLTR------KMTHDSIVVQLNGAGNMQTTGITYASDIMR 107 (267)
T ss_dssp HHHHHHHHHHHHHHGGGCCS---SCEEEECCSHHHHHHHHTCCC------CCCSSCEEEECSCCCCTTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCC---CCEEEECCCHHHHHHHHhcCc------cCCCCCEEEECCCCCCCCccccccHHHHHH
Confidence 34445555555555554432 269999999999999998753 468899999999977 443 22 35778
Q ss_pred hcCCCCCCCCCCeEeCCCCCCCHHH-----HHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEEECchhh
Q psy10371 86 NFFSHIDIQPENVHILDGNAPDLHA-----ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQET 160 (219)
Q Consensus 86 ~l~~~~~i~~~~i~~~~~~~~~~~~-----~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v~l~~~t 160 (219)
.|.++++.....++.+..- ++++. .+..|++.|+..++.|++|+|||..+| +|++.+.... .+++..
T Consensus 108 ~lA~~~~~~~~~l~~P~~~-~s~~~~~~l~~~~~i~~~l~~~~~~Diai~GIG~~~~----~~~s~~~~~g---~~s~~~ 179 (267)
T 3nze_A 108 RFGSAYGARVEQFPVPAFF-DHASTKTAMWNERSVQRILDLQARMSIAIFGVGSVDS----DYPSHVYAGG---YLDEHD 179 (267)
T ss_dssp HHHHHHTCEEECCCSCSSC-SSHHHHHHHTTCHHHHHHHHHHHTCSEEEECCEECC---------CCCTTS---CCCHHH
T ss_pred HHHHHhCCeEEEeeCCEEc-CCHHHHHHHHhChHHHHHHHHHhcCCEEEEecCCCCC----CCCChHHHcC---CCCHHH
Confidence 8888888766666666543 23321 246788888888899999999999998 4444432111 122221
Q ss_pred HH----------HhhcccCCCCCCCC----CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 161 LE----------ANARFFDNDIKKVP----KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 161 ~~----------~~~~~~~~~~~~~p----~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
+. .+.++|..+-..++ .+.|||++..|++++++|.+ .|+.|+++++.++.++
T Consensus 180 ~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g~ 246 (267)
T 3nze_A 180 LTMLAADDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAG 246 (267)
T ss_dssp HHHHHHTTEEEEETTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTT
T ss_pred HHHHHHCCcEEEEecccccCCCCCCCcchhcceecCChHHHccCCeEEEEeCChHHHHHHHHHHhcC
Confidence 11 13456754323333 67899999999999999999 9999999999999976
No 23
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=99.31 E-value=9.9e-14 Score=116.63 Aligned_cols=188 Identities=9% Similarity=0.031 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cch---HHHHHHH
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNF---LTKLFRH 85 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~---~~~~~~~ 85 (219)
+++++.+|+++.+.++. + .+|++++|+|+..+++.|.. .++.++.|+.+.-=+ .++ +.+.+.+
T Consensus 39 ~~lg~aaA~~L~~~l~~-----~--~vIGv~wG~Tl~~v~~~l~~------~~~~~~~~V~l~GG~~~~~~~~~~~~i~~ 105 (267)
T 3kv1_A 39 KQVAALVSSYLNNNLQE-----G--MAVAVGQGQNVAAVADHAGI------VTQRNARFVSAIGGTHRSGDIINADHICR 105 (267)
T ss_dssp HHHHHHHHHHHHHHCCT-----T--CEEEECCSHHHHHHHHCCCC------CCCCCCEEEESBCBCC----CCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-----C--CEEEECchHHHHHHHHhccc------cCCCCCEEEeCCCCCCCCccccCHHHHHH
Confidence 56777777777776642 2 69999999999999988753 467889999998866 333 2223455
Q ss_pred hcCCCCCCCCCCeEeCCCCCCCHH-H----HHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEEEC-c-h
Q psy10371 86 NFFSHIDIQPENVHILDGNAPDLH-A----ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTL-A-Q 158 (219)
Q Consensus 86 ~l~~~~~i~~~~i~~~~~~~~~~~-~----~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v~l-~-~ 158 (219)
.|.++++.....++.+..- ++++ . ....|++.++.....|++|+|||..+--++++-.. +.+.+.+..+ . .
T Consensus 106 ~lA~~~~~~~~~l~~P~~~-~~~~~~~~l~~~~~i~~vl~~~~~aDiai~GIG~~~~~s~l~~~g-~~~~~~~~~L~~~~ 183 (267)
T 3kv1_A 106 RLAKKYGGSSETLYAPAYV-NDPSLRSAFMEHATIKETLSQARKAEFALVGIGDMDENSHMVKLG-FFTPKEFVEARLND 183 (267)
T ss_dssp HHHHHHTCEEECCCSBSBC-SSHHHHHHHHTSHHHHHHHHHHHTCSEEEEEEEEHHHHTHHHHTT-SSCHHHHHHHHHTT
T ss_pred HHHHHhCCeEEEEecCccc-CCHHHHHHHHhChHHHHHHHHHHhCCEEEEeCCCCCCccHHHHhC-CCCHHHHHHHHHhc
Confidence 5666666544455544432 2332 1 23678888888789999999999877322222111 1111111111 0 0
Q ss_pred hhHHH-hh-cccCCCCCCCC----CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 159 ETLEA-NA-RFFDNDIKKVP----KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 159 ~t~~~-~~-~~~~~~~~~~p----~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
.+... .. ++|+.+-..++ .+.|||++..|++++++|.+ .|+.|+++++.++.++
T Consensus 184 gaVGdi~g~rffD~~G~~v~~~~~~~~i~~~l~~l~~~~~~i~va~G~~K~~ai~~al~~~ 244 (267)
T 3kv1_A 184 GIVGDIGGFDFFKLDGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRTG 244 (267)
T ss_dssp CEEEEETTTEEEETTSCBCCCGGGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTS
T ss_pred CCEEEEcchHhhcCCCCEeccccccceeecCHHHHcCCCcEEEEecChHHHHHHHHHHhcC
Confidence 00111 23 46754333333 36899999999999999999 9999999999999875
No 24
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=99.30 E-value=1e-12 Score=110.35 Aligned_cols=180 Identities=8% Similarity=0.008 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCC-CceeEEeecccc--cch--HH-HHH
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISF-KYVKTFNMDEYG--RNF--LT-KLF 83 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w-~~v~~~~~DE~v--~~~--~~-~~~ 83 (219)
+++++.+|+++.+.++. + .+|++++|+|+..+++.|.. .+. .++.|+.+.--+ .++ ++ ..+
T Consensus 44 ~~lg~~aA~~L~~~l~~-----~--~vIGv~wG~Tl~~v~~~l~~------~~~~~~~~~V~l~Gg~~~~~~~~~~~n~i 110 (266)
T 3efb_A 44 AMMGLHGAQLLDRLLEP-----G--DIVGFSWGRAVSALVENLPQ------AGQSRQLICVPIIGGPSGKLESRYHVNTL 110 (266)
T ss_dssp HHHHHHHHHHHHHHCCT-----T--CEEEECCSHHHHHHHHTCCC------CSSCCCCEEEESBCBCTTSSCGGGCHHHH
T ss_pred HHHHHHHHHHHHHhCCC-----C--CEEEEcccHHHHHHHHhcCc------cCCCCCeEEEEcCCCCCCCCccccCHHHH
Confidence 45677777777776632 2 69999999999999988753 223 368889988864 333 22 235
Q ss_pred HHhcCCCCCCCCCCeEeCCCCCCCHHH-----HHHHHHHHHHHhCCccEEEEeecCCCcccccCCCCCCCCcceEEECch
Q psy10371 84 RHNFFSHIDIQPENVHILDGNAPDLHA-----ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQ 158 (219)
Q Consensus 84 ~~~l~~~~~i~~~~i~~~~~~~~~~~~-----~~~~y~~~i~~~~~~Dl~lLG~G~DGHiaslfP~~~~~~~~~~v~l~~ 158 (219)
.+.|.++++.....++.+..- ++++. ....|++.++.....|++++|+|... |++++.. .-.+++
T Consensus 111 ~~~lA~~~~~~~~~l~aP~~~-~~~~~~~~l~~~~~i~~vl~~~~~aDiai~GIG~~~------~~~~~~~---~g~~s~ 180 (266)
T 3efb_A 111 TYSAAAKLKGESHLADFPALL-DNPLIRNGIMQSQHFKTISAYWDNLDIALVGIGSPA------IRDGANW---HAFYGG 180 (266)
T ss_dssp HHHHHHHTTCEECCCCSBSBC-SSHHHHHHHHTSHHHHHHHHHHHTCSEEEECCBCCC------------------CSCH
T ss_pred HHHHHHHhCCeEEEEeCCeec-CCHHHHHHHHhChHHHHHHHHHhcCCEEEEecCCCC------CCchhHH---hcCCCH
Confidence 666667777666666655443 23321 23677888888789999999999863 2322210 001222
Q ss_pred hhHH----H------hhcccCCCCCCCC----CceeeeCHHHHhccCeEEEE-cCCccHHHHhhhhCCC
Q psy10371 159 ETLE----A------NARFFDNDIKKVP----KEALTVGVGTVMDAQEVRIC-YGFVDSYKLRKPAVPR 212 (219)
Q Consensus 159 ~t~~----~------~~~~~~~~~~~~p----~~riTlg~~~i~~a~~vi~~-~G~~Ka~~l~~~l~~~ 212 (219)
..+. . +.++|..+-..++ .+.|||++..|++++++|.+ .|++|+++++.++.++
T Consensus 181 ~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g~ 249 (266)
T 3efb_A 181 EESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGK 249 (266)
T ss_dssp HHHHHHHHTTCCEEETTEEECTTSCBCCCTTGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTT
T ss_pred HHHHHHHHCCcEEEEecccccCCCCCCCcchhcceecCCHHHHhCCCCEEEEecChHHHHHHHHHHhcC
Confidence 2221 1 3466754323233 37899999999999999999 9999999999999976
No 25
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=70.71 E-value=8.5 Score=32.01 Aligned_cols=56 Identities=18% Similarity=0.194 Sum_probs=37.0
Q ss_pred HHHHHHHHHhh--CCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 17 ARYVLKKITDF--KPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 17 a~~i~~~i~~~--~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
-+.+.+.|++. ++. .+++.|++|||..-..+...|.+.. ..+.++++..+.+|.-.
T Consensus 8 ~~~~~~~i~~~~l~~~-~~~vlva~SGG~DS~~Ll~ll~~~~--~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 8 IRKVLALQNDEKIFSG-ERRVLIAFSGGVDSVVLTDVLLKLK--NYFSLKEVALAHFNHML 65 (317)
T ss_dssp HHHHHHHHHHHCSCSS-CCEEEEECCSSHHHHHHHHHHHHST--TTTTCSEEEEEEEECCS
T ss_pred HHHHHHHHHHcCCCCC-CCEEEEEecchHHHHHHHHHHHHHH--HHcCCCEEEEEEEECCC
Confidence 34455555443 333 6689999999987777777776531 23456668889999855
No 26
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=68.76 E-value=12 Score=32.63 Aligned_cols=42 Identities=5% Similarity=0.172 Sum_probs=30.4
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 32 DNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 32 ~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
.+++.||+|||..-..+...|.+.... ...+ ++..+.+|...
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~-~~g~-~v~avhvdhgl 54 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTE-NPGV-ALRAIHVHHGL 54 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTT-STTC-EEEEEEECCSC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHh-cCCC-eEEEEEEECCC
Confidence 667999999998877788877764322 1222 58888899865
No 27
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=66.61 E-value=7.1 Score=31.48 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=39.1
Q ss_pred CEEEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeeccc
Q psy10371 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEY 74 (219)
Q Consensus 1 m~i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~ 74 (219)
|++.---+.++..+.+...|.+.+++.. .+++.++||||-.-.-+...+.+. . .+++ .+.++-.
T Consensus 1 ~~~~~~~~~~~~~~~l~~~l~~~v~~~~---~~~vvv~lSGGiDSsv~a~l~~~~---~---~~~~-av~~~~~ 64 (249)
T 3fiu_A 1 MKIVKDFSPKEYSQKLVNWLSDSCMNYP---AEGFVIGLSGGIDSAVAASLAVKT---G---LPTT-ALILPSD 64 (249)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTTT---CSEEEEECCSSHHHHHHHHHHHHT---T---SCEE-EEECCCT
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHhC---CCCEEEEecCcHHHHHHHHHHHHh---C---CCCE-EEEecCC
Confidence 5665556788888888888888887632 457999999996544444444431 1 2344 6666653
No 28
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=60.57 E-value=50 Score=25.49 Aligned_cols=61 Identities=15% Similarity=0.130 Sum_probs=36.7
Q ss_pred EEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCC------------------HHHHHHHHHHHhhcCCCCCC
Q psy10371 3 LIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGT------------------PLGMYKKLIEYHQQGKISFK 64 (219)
Q Consensus 3 i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGst------------------p~~~y~~L~~~~~~~~i~w~ 64 (219)
+++.++. +++....+.+.+.... .+.-+..+.||.. |..+++.+. ...++++
T Consensus 106 lil~Pt~-~L~~Q~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~I~v~Tp~~l~~~l~----~~~~~~~ 175 (242)
T 3fe2_A 106 LVLAPTR-ELAQQVQQVAAEYCRA-----CRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE----CGKTNLR 175 (242)
T ss_dssp EEECSSH-HHHHHHHHHHHHHHHH-----TTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHH----HTSCCCT
T ss_pred EEEeCcH-HHHHHHHHHHHHHHhh-----cCceEEEEECCCChHHHHHHhcCCCCEEEECHHHHHHHHH----cCCCCcc
Confidence 5666766 4555666666555443 1223445566653 444444443 3567889
Q ss_pred ceeEEeecc
Q psy10371 65 YVKTFNMDE 73 (219)
Q Consensus 65 ~v~~~~~DE 73 (219)
++.++-+||
T Consensus 176 ~~~~lViDE 184 (242)
T 3fe2_A 176 RTTYLVLDE 184 (242)
T ss_dssp TCCEEEETT
T ss_pred cccEEEEeC
Confidence 999999999
No 29
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=51.73 E-value=40 Score=26.96 Aligned_cols=59 Identities=17% Similarity=0.111 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+.+++.+.+...+.+.+++.. .+++.++||||-.-.-+...+.+.. . .+++.+.+|-..
T Consensus 5 ~~~~~~~~l~~~l~d~v~~~g---~~~vvv~lSGGiDSsv~a~l~~~~~-----g-~~v~av~~~~~~ 63 (249)
T 3p52_A 5 DWQKITEKMCDFIQEKVKNSQ---SQGVVLGLSGGIDSALVATLCKRAL-----K-ENVFALLMPTQI 63 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHTSS---CSEEEEECCSSHHHHHHHHHHHHHH-----T-TSEEEEECCSCC
T ss_pred CHHHHHHHHHHHHHHHHHHhC---CCCEEEEcCCCHHHHHHHHHHHHHc-----C-CcEEEEEecCCC
Confidence 677888888888888887632 4579999999965444444444421 1 478888888744
No 30
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=49.61 E-value=82 Score=25.87 Aligned_cols=74 Identities=9% Similarity=0.024 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cchHHHHHHHhc
Q psy10371 9 VSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNFLTKLFRHNF 87 (219)
Q Consensus 9 ~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~~~~~~~~~l 87 (219)
.+.+.+...+.|.+.+. ++++.+++|||..=.-+...+.+.. . .++..+.+|... +......+++.+
T Consensus 3 ~~~~~~~~~~~ir~~v~------~~kvlvalSGGvDSsvla~ll~~~~-----g-~~v~av~vd~g~~~~~e~~~~~~~~ 70 (308)
T 2dpl_A 3 WGRFVEEKVREIRETVG------DSKAIIALSGGVDSSTAAVLAHKAI-----G-DRLHAVFVNTGFLRKGEPEFVVKTF 70 (308)
T ss_dssp HHHHHHHHHHHHHHHHT------TSCEEEECCSSHHHHHHHHHHHHHH-----G-GGEEEEEEECSCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC------CCCEEEEEeChHHHHHHHHHHHHhh-----C-CCEEEEEEcCCCCChHHHHHHHHHH
Confidence 34444444455544442 3469999999976655556665531 1 368888888855 333122234445
Q ss_pred CCCCCCC
Q psy10371 88 FSHIDIQ 94 (219)
Q Consensus 88 ~~~~~i~ 94 (219)
-+.++++
T Consensus 71 a~~lgi~ 77 (308)
T 2dpl_A 71 RDEFGMN 77 (308)
T ss_dssp TTTTCCE
T ss_pred HHHcCCc
Confidence 4566763
No 31
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=49.52 E-value=18 Score=29.48 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHH
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGM 48 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~ 48 (219)
|+++..+.+...+.+.+++.-. .+.++|+||||-.=.-+
T Consensus 18 ~~~~~i~~~~~~L~~~l~~~g~--~~~vvvglSGGvDSsv~ 56 (275)
T 1wxi_A 18 NAEEEIRRSVDFLKSYLQTYPF--IKSLVLGISGGQDSTLA 56 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTT--CCEEEEECCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCC--CCCEEEECcCcHHHHHH
Confidence 4566666677777777776320 23699999999544333
No 32
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=47.61 E-value=22 Score=28.82 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHH
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGM 48 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~ 48 (219)
++++..+.+...|.+.+++.. .+.++|+||||-.=.-+
T Consensus 17 ~~~~~i~~~~~~L~d~v~~~g---~~~vvvgLSGGvDSsv~ 54 (271)
T 1kqp_A 17 DPKQEIEDRVNFLKQYVKKTG---AKGFVLGISGGQDSTLA 54 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT---CCEEEEECCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcC---CCCEEEECCCCHHHHHH
Confidence 456666667777777777642 34699999999554333
No 33
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=45.16 E-value=79 Score=23.79 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=16.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+.+.+. ...++.+++.++-+||
T Consensus 133 Tp~~l~~~l~----~~~~~~~~~~~lViDE 158 (219)
T 1q0u_A 133 TPGRINDFIR----EQALDVHTAHILVVDE 158 (219)
T ss_dssp CHHHHHHHHH----TTCCCGGGCCEEEECS
T ss_pred CHHHHHHHHH----cCCCCcCcceEEEEcC
Confidence 3555554443 2556778888888888
No 34
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=43.79 E-value=28 Score=28.72 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCH
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTP 45 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp 45 (219)
|+++..+.....+.+.+++.- -+.++|+||||-.-
T Consensus 25 ~~~~~i~~~v~~L~d~l~~~g---~~~vvvglSGGiDS 59 (285)
T 3dpi_A 25 DARDEAERRIGFVADYLRTAG---LRACVLGISGGIDS 59 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT---CCEEEEECCSSHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcC---CCcEEEEccCChhH
Confidence 566777777788888888743 34699999999643
No 35
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=42.22 E-value=73 Score=25.44 Aligned_cols=59 Identities=12% Similarity=0.051 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+.+++.+.+...|.+.+.... .+++.++||||-.=..+...+.+.. . .+|+.+.+|-..
T Consensus 4 ~~~~~~~~l~~~l~~~v~~~~---~~~vvv~lSGGiDSsv~~~l~~~~~-----~-~~v~av~~~~~~ 62 (268)
T 1xng_A 4 DYQKLIVYLCDFLEKEVQKRG---FKKVVYGLSGGLDSAVVGVLCQKVF-----K-ENAHALLMPSSV 62 (268)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT---CCCEEEECCSSHHHHHHHHHHHHHH-----G-GGEEEEECCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHhC---CCCEEEEccCcHHHHHHHHHHHHhC-----C-CCEEEEEeCCCC
Confidence 467777788888888776521 4469999999976555555555532 1 368888888643
No 36
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=41.95 E-value=31 Score=28.30 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHH
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGM 48 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~ 48 (219)
++++..+...+.+.+.+++.- -+.++|+||||-.-.-+
T Consensus 19 ~~~~~i~~~v~~L~d~l~~~g---~~~vvvglSGGvDSal~ 56 (279)
T 3q4g_A 19 DPQFEIERRVAFIKRKLTEAR---YKSLVLGISGGVDSTTC 56 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT---CCEEEEECCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcC---CCCEEEEccCCHHHHHH
Confidence 456666777788888887742 34699999999653333
No 37
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=39.81 E-value=44 Score=26.57 Aligned_cols=36 Identities=11% Similarity=-0.040 Sum_probs=28.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 33 NYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 33 ~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+++.|++|||..-..+...+.+.. .++.++++|.-.
T Consensus 46 ~~v~va~SGG~DS~vLL~ll~~~~-------~~v~vv~idtg~ 81 (252)
T 2o8v_A 46 GEYVLSSSFGIQAAVSLHLVNQIR-------PDIPVILTDTGY 81 (252)
T ss_dssp SCEEEECCCSTTHHHHHHHHHHHS-------TTCEEEECCCSC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHhC-------CCCeEEEecCCC
Confidence 479999999999888888887741 367889999843
No 38
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=39.54 E-value=1.4e+02 Score=26.53 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cchHHHHHHHhcC
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNFLTKLFRHNFF 88 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~~~~~~~~~l~ 88 (219)
+++.+...+.|.+.+ . .+++.++||||-.=.-+...+.+.. . .+++.+.+|-.. .........+.+-
T Consensus 211 ~~~~~~~~~~ir~~v----~--~~~vvvalSGGvDSsv~a~ll~~a~-----G-~~v~av~v~~g~~~~~e~~~~~~~la 278 (525)
T 1gpm_A 211 AKIIDDAVARIREQV----G--DDKVILGLSGGVDSSVTAMLLHRAI-----G-KNLTCVFVDNGLLRLNEAEQVLDMFG 278 (525)
T ss_dssp HHHHHHHHHHHHHHH----T--TCEEEEECCSSHHHHHHHHHHHHHH-----G-GGEEEEEEECSCSCTTHHHHHHHHHT
T ss_pred HHHHHhhhhhhhhhh----c--ccceEEEecCCCCHHHHHHHHHHHh-----C-CCEEEEEEeCCCCCchHHHHHHHHHH
Confidence 444444444444433 2 3579999999966544444554421 1 478888888865 3332223344556
Q ss_pred CCCCCC
Q psy10371 89 SHIDIQ 94 (219)
Q Consensus 89 ~~~~i~ 94 (219)
+.++++
T Consensus 279 ~~lgi~ 284 (525)
T 1gpm_A 279 DHFGLN 284 (525)
T ss_dssp TTTCCC
T ss_pred HHhCCc
Confidence 666763
No 39
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=38.64 E-value=1.3e+02 Score=22.97 Aligned_cols=26 Identities=35% Similarity=0.502 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+++.+.. ..++.+++.++-+||
T Consensus 156 Tp~~l~~~l~~----~~~~~~~~~~lViDE 181 (237)
T 3bor_A 156 TPGRVFDMLNR----RYLSPKWIKMFVLDE 181 (237)
T ss_dssp CHHHHHHHHHT----TSSCSTTCCEEEEES
T ss_pred CHHHHHHHHHh----CCcCcccCcEEEECC
Confidence 45555555543 456778888999999
No 40
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=38.27 E-value=80 Score=24.10 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=28.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 33 NYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 33 ~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+++.|++|||..=..+...|.+. . .++.++++|.-+
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~----~---~~v~~v~vd~g~ 80 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQI----R---PDIPVILTDTGY 80 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHH----S---TTCEEEEEECSC
T ss_pred CCEEEEecCCHHHHHHHHHHHHh----C---CCCeEEEeeCCC
Confidence 47999999999999988888874 1 367888888844
No 41
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=37.87 E-value=1.2e+02 Score=25.05 Aligned_cols=61 Identities=20% Similarity=0.164 Sum_probs=35.2
Q ss_pred EEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCC------------------CHHHHHHHHHHHhhcCCCCCC
Q psy10371 3 LIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGG------------------TPLGMYKKLIEYHQQGKISFK 64 (219)
Q Consensus 3 i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGs------------------tp~~~y~~L~~~~~~~~i~w~ 64 (219)
+++.++. +++...++.+.+.... .+.-+..+.||. ||..+.+.+. ...++++
T Consensus 105 lil~Pt~-~L~~q~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~I~v~Tp~~l~~~l~----~~~~~~~ 174 (417)
T 2i4i_A 105 LVLAPTR-ELAVQIYEEARKFSYR-----SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMME----RGKIGLD 174 (417)
T ss_dssp EEECSSH-HHHHHHHHHHHHHHTT-----SSCCEEEECSSSCHHHHHHHHTTCCSEEEECHHHHHHHHH----TTSBCCT
T ss_pred EEECCcH-HHHHHHHHHHHHHhCc-----CCceEEEEECCCCHHHHHHHhhCCCCEEEEChHHHHHHHH----cCCcChh
Confidence 4566665 4555555555544322 122344555554 3444444433 3567889
Q ss_pred ceeEEeecc
Q psy10371 65 YVKTFNMDE 73 (219)
Q Consensus 65 ~v~~~~~DE 73 (219)
++.++-+||
T Consensus 175 ~~~~iViDE 183 (417)
T 2i4i_A 175 FCKYLVLDE 183 (417)
T ss_dssp TCCEEEESS
T ss_pred hCcEEEEEC
Confidence 999999999
No 42
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=36.90 E-value=22 Score=29.48 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc-cc-cch---HHHHHHHhcCCCCCCCCCCeEeCCCCCCCHHHHHHHHHHH
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE-YG-RNF---LTKLFRHNFFSHIDIQPENVHILDGNAPDLHAECVQYEKD 118 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE-~v-~~~---~~~~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~y~~~ 118 (219)
++..++..|.+.+. + =.++++|.+|+ |+ .++ +.-.....|=+ ++ +..+.-|-++.+..+...
T Consensus 152 tg~~i~~~l~~~p~---~-~~~~~~y~~d~~y~~~~~~~~~~iw~~~~l~~--------~~-~~~~~fd~~~~~~~~k~~ 218 (286)
T 3phz_A 152 TGANVHATLLACPA---L-RQDFKSYLSDGLYLVLTRDQISSIWQASGLGS--------TP-WRSEIFDCDDFATVFKGA 218 (286)
T ss_dssp EHHHHHHHHHHCTT---T-CSCCBCSSSSCEEECCCHHHHHHHHHHHTGGG--------SC-CBTTTBCHHHHHHHHHHH
T ss_pred CcccceehhccCCc---c-CCCEEEEcCCceEEeccHHHHHHhhhccCCCc--------cc-ccccccCchHHHHHHHHH
Confidence 46677888876422 2 26999999999 76 544 22233444422 11 222223555555555555
Q ss_pred HHHh-------CCccEE---EEee-cCCCcccccCC
Q psy10371 119 IKEA-------GGIHLF---VGGI-GPDGHIAFNEP 143 (219)
Q Consensus 119 i~~~-------~~~Dl~---lLG~-G~DGHiaslfP 143 (219)
+.+. .+|+++ ++|+ |+.+|.+-.|=
T Consensus 219 ~~~~~~~~~~a~g~~~~~g~~~~~~~~~~~~~n~~~ 254 (286)
T 3phz_A 219 VAKWGNENFKANGFALLCGLMFGSKSSGAHAYNWFV 254 (286)
T ss_dssp HHHHHHHHCCCCSCEECCEEEEEEETTEEEEEEEEE
T ss_pred HHHhhhhhhccccceEEEEEEEeccCCCcceeEEEE
Confidence 5443 267764 5577 88899887664
No 43
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=35.26 E-value=82 Score=26.21 Aligned_cols=58 Identities=12% Similarity=0.006 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 10 SNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 10 ~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+.+.+.+.+.|...+.+ -+++.|++|||..=..++..+.+...... ..+.++.+|.-+
T Consensus 29 ~~le~~a~~ilr~~~~~-----~~~ivVa~SGGkDS~vLL~Ll~~~~~~~~---~~i~vv~vDtg~ 86 (325)
T 1zun_A 29 KQLEAESIHIIREVAAE-----FDNPVMLYSIGKDSAVMLHLARKAFFPGK---LPFPVMHVDTRW 86 (325)
T ss_dssp HHHHHHHHHHHHHHHHH-----CSSEEEECCSSHHHHHHHHHHHHHHTTSC---CSSCEEEECCSC
T ss_pred HHHHHHHHHHHHHHHHh-----CCCEEEEEcChHHHHHHHHHHHHhccccC---CCEEEEEEECCC
Confidence 34444444555555544 23589999999988888888877543212 246788888844
No 44
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=33.03 E-value=2e+02 Score=23.49 Aligned_cols=102 Identities=8% Similarity=0.029 Sum_probs=53.1
Q ss_pred HHHhhCCCCC---CceEEEecCCCCHHHHHHHHHHHhhc---------------CCCCCCceeEEeecc-cc-cch--HH
Q psy10371 23 KITDFKPGPD---NYFVLGLPTGGTPLGMYKKLIEYHQQ---------------GKISFKYVKTFNMDE-YG-RNF--LT 80 (219)
Q Consensus 23 ~i~~~~~~~~---~~~~i~lsgGstp~~~y~~L~~~~~~---------------~~i~w~~v~~~~~DE-~v-~~~--~~ 80 (219)
.|++++++-. +.+.|++|||..-..+...+.+.... ....-.++.++++|. +. +.. +-
T Consensus 41 il~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv 120 (306)
T 2wsi_A 41 LLSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFV 120 (306)
T ss_dssp HHHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHcccccCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHH
Confidence 5555554312 46999999998877777776654210 011124678889998 33 333 33
Q ss_pred HHHHHhcCCCCCCCCCCeEeCCCC---CCCHHHHHHHHHHHHHHhCCccEEEEeecC
Q psy10371 81 KLFRHNFFSHIDIQPENVHILDGN---APDLHAECVQYEKDIKEAGGIHLFVGGIGP 134 (219)
Q Consensus 81 ~~~~~~l~~~~~i~~~~i~~~~~~---~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~ 134 (219)
..+.+.+ ++ +++.+... .....+...+| ++..+.++.++.|+=.
T Consensus 121 ~~~~~~y----gl---~l~v~~~~~~~~~~l~~~~~~~---~k~~p~~~aii~G~Rr 167 (306)
T 2wsi_A 121 LETSERY----CL---SLYESQRQSGASVNMADAFRDF---IKIYPETEAIVIGIRH 167 (306)
T ss_dssp HHHHHHT----TE---EEEECCC-----CCHHHHHHHH---HHHCTTCCEEECCCCC
T ss_pred HHHHHHc----CC---CEEEEeCCccccccHHHHHHHH---HhhCCCCcEEEEEEec
Confidence 3333333 32 23333221 01344444444 3444567888888743
No 45
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=32.41 E-value=1.7e+02 Score=22.43 Aligned_cols=16 Identities=38% Similarity=0.642 Sum_probs=13.6
Q ss_pred cCCCCCCceeEEeecc
Q psy10371 58 QGKISFKYVKTFNMDE 73 (219)
Q Consensus 58 ~~~i~w~~v~~~~~DE 73 (219)
...++++++.++-+||
T Consensus 167 ~~~~~~~~~~~lViDE 182 (253)
T 1wrb_A 167 KNKISLEFCKYIVLDE 182 (253)
T ss_dssp TTSBCCTTCCEEEEET
T ss_pred cCCCChhhCCEEEEeC
Confidence 4567889999999999
No 46
>2z5e_A Proteasome assembling chaperone 3; beta sandwich, homodimer; 2.00A {Homo sapiens}
Probab=32.40 E-value=1.2e+02 Score=21.60 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCC
Q psy10371 9 VSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKI 61 (219)
Q Consensus 9 ~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i 61 (219)
.+.+.+..|+.|++.+..... ++++.++|+--..-...|+.+.+.+.+.++
T Consensus 71 de~l~~~~Arql~~~i~~~~~--~r~lvl~LgLkd~s~~~~~~i~~~i~~~~v 121 (122)
T 2z5e_A 71 DEPLIHVFAKNLVAFVSQEAG--NRAVLLAVAVKDKSMEGLKALREVIRVCQV 121 (122)
T ss_dssp CCHHHHHHHHHHHHHHHHHTT--SCEEEEEEECSSCCHHHHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHHhhccCC--CCcEEEEecccccCHHHHHHHHHHHHHhcc
Confidence 357788888999998876332 667888888866666778888877665544
No 47
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=31.34 E-value=54 Score=26.02 Aligned_cols=53 Identities=23% Similarity=0.236 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 9 VSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 9 ~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
.+++.+.+.+.|.+. . .+++.++||||-.=..+...+.+.. +. .+|+.+.+|-
T Consensus 6 ~~~~~~~l~~~i~~~------~-~~~vvv~lSGGiDSs~~~~l~~~~~--g~---~~v~av~~~~ 58 (257)
T 2e18_A 6 YDKVIERILEFIREK------G-NNGVVIGISGGVDSATVAYLATKAL--GK---EKVLGLIMPY 58 (257)
T ss_dssp HHHHHHHHHHHHHHH------C-TTCEEEECCSSHHHHHHHHHHHHHH--CG---GGEEEEECCS
T ss_pred HHHHHHHHHHHHHHh------C-CCcEEEEecCCHHHHHHHHHHHHhc--CC---CcEEEEEeCC
Confidence 454444444444443 2 4569999999976555555555432 11 3677777775
No 48
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=30.39 E-value=2e+02 Score=23.70 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+++.+. ...+..+++.++-+||
T Consensus 162 Tp~~l~~~l~----~~~~~~~~~~~vViDE 187 (410)
T 2j0s_A 162 TPGRVFDMIR----RRSLRTRAIKMLVLDE 187 (410)
T ss_dssp CHHHHHHHHH----TTSSCCTTCCEEEEET
T ss_pred CHHHHHHHHH----hCCccHhheeEEEEcc
Confidence 4544444443 3567788899999999
No 49
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=29.79 E-value=39 Score=23.74 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=18.6
Q ss_pred HHHHHHHhCCccEEEEeecCCCccccc
Q psy10371 115 YEKDIKEAGGIHLFVGGIGPDGHIAFN 141 (219)
Q Consensus 115 y~~~i~~~~~~Dl~lLG~G~DGHiasl 141 (219)
.+..++. .+|++|+|-|..|+.-..
T Consensus 54 ~~~ll~~--~~evlliGTG~~~~~~~~ 78 (113)
T 1ihn_A 54 LEELLEE--KPESIIIGSGVHGALETG 78 (113)
T ss_dssp HHHHHTT--CCSEEEEECCTTCCCEES
T ss_pred HHHHHhc--CCCEEEECCCCCccccCC
Confidence 4444443 589999999999977654
No 50
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=29.61 E-value=1.7e+02 Score=22.11 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=12.1
Q ss_pred CCCCCCceeEEeecc
Q psy10371 59 GKISFKYVKTFNMDE 73 (219)
Q Consensus 59 ~~i~w~~v~~~~~DE 73 (219)
..++++++.++-+||
T Consensus 160 ~~~~~~~~~~lViDE 174 (230)
T 2oxc_A 160 DYLNPGSIRLFILDE 174 (230)
T ss_dssp TSSCGGGCCEEEESS
T ss_pred CCcccccCCEEEeCC
Confidence 556778888888999
No 51
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=29.20 E-value=42 Score=23.88 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=16.0
Q ss_pred HHHHHHhCCccEEEEeecCCCcc
Q psy10371 116 EKDIKEAGGIHLFVGGIGPDGHI 138 (219)
Q Consensus 116 ~~~i~~~~~~Dl~lLG~G~DGHi 138 (219)
+..++ ..+|++|+|.|..+++
T Consensus 55 ~~ll~--~~~evliiGtG~~~~~ 75 (122)
T 2ab1_A 55 KEVVE--KGVQTLVIGRGMSEAL 75 (122)
T ss_dssp HHHHT--TCCSEEEEEECSSCCS
T ss_pred HHHhh--CCCCEEEECCCCCCcc
Confidence 34454 3689999999998875
No 52
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=28.22 E-value=1.8e+02 Score=21.62 Aligned_cols=25 Identities=20% Similarity=0.432 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 45 PLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 45 p~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
|..+++.+. ...+.++++.++-+||
T Consensus 139 p~~l~~~~~----~~~~~~~~~~~iViDE 163 (224)
T 1qde_A 139 PGRVFDNIQ----RRRFRTDKIKMFILDE 163 (224)
T ss_dssp HHHHHHHHH----TTSSCCTTCCEEEEET
T ss_pred HHHHHHHHH----hCCcchhhCcEEEEcC
Confidence 444554443 3566788899999999
No 53
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=27.97 E-value=53 Score=29.71 Aligned_cols=60 Identities=12% Similarity=-0.071 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 8 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+.+++.+.+...|.+.+++.. .+.++|+||||-.-.-+.-.+.+.. + -.+|+.+.++-..
T Consensus 305 ~~~~~~~~~~~~l~~~~~~~g---~~~vvvglSGGvDSsv~a~la~~al--G---~~~v~~v~m~~~~ 364 (590)
T 3n05_A 305 ADEEVYSALVVGLRAYVAKNG---FRSVLIGLSGGIDSALVAAIACDAL--G---AQNVYGVSMPSKY 364 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT---CCCEEEECCSSHHHHHHHHHHHHHH--C---GGGEEEEECCCSS
T ss_pred cHHHHHHHHHHHHHHHHHHhC---CCcEEEEcCCCHHHHHHHHHHHHHh--C---cccEEEEEECCCC
Confidence 356777778888888776532 3469999999954333333333321 1 1478888888644
No 54
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=27.96 E-value=1.7e+02 Score=21.89 Aligned_cols=16 Identities=13% Similarity=0.416 Sum_probs=12.8
Q ss_pred cCCCCCCceeEEeecc
Q psy10371 58 QGKISFKYVKTFNMDE 73 (219)
Q Consensus 58 ~~~i~w~~v~~~~~DE 73 (219)
...++++++.++-+||
T Consensus 160 ~~~~~~~~~~~lViDE 175 (228)
T 3iuy_A 160 NNSVNLRSITYLVIDE 175 (228)
T ss_dssp TTCCCCTTCCEEEECC
T ss_pred cCCcCcccceEEEEEC
Confidence 3566788889999999
No 55
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=27.91 E-value=2.1e+02 Score=22.08 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=33.3
Q ss_pred EEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCC------------------HHHHHHHHHHHhhcCCCCCC
Q psy10371 3 LIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGT------------------PLGMYKKLIEYHQQGKISFK 64 (219)
Q Consensus 3 i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGst------------------p~~~y~~L~~~~~~~~i~w~ 64 (219)
+++.++. +++...++.+.+..... +.-+..+.||.. |..+++.+.. ...++.+
T Consensus 115 lil~Ptr-~L~~q~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~I~v~Tp~~l~~~l~~---~~~~~l~ 185 (249)
T 3ber_A 115 LVLTPTR-ELAFQISEQFEALGSSI-----GVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLEN---TKGFNLR 185 (249)
T ss_dssp EEECSSH-HHHHHHHHHHHHHHGGG-----TCCEEEECTTSCHHHHHHHHHTCCSEEEECHHHHHHHHHH---STTCCCT
T ss_pred EEEeCCH-HHHHHHHHHHHHHhccC-----CeeEEEEECCCChHHHHHHhcCCCCEEEECHHHHHHHHHc---CCCcCcc
Confidence 4556665 45555666555544321 112334455533 4444444432 2346678
Q ss_pred ceeEEeecc
Q psy10371 65 YVKTFNMDE 73 (219)
Q Consensus 65 ~v~~~~~DE 73 (219)
++.++-+||
T Consensus 186 ~~~~lViDE 194 (249)
T 3ber_A 186 ALKYLVMDE 194 (249)
T ss_dssp TCCEEEECS
T ss_pred ccCEEEEcC
Confidence 888999999
No 56
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=27.83 E-value=2e+02 Score=23.07 Aligned_cols=27 Identities=30% Similarity=0.238 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+++.+.. ...++.+++.++-+||
T Consensus 217 TP~~l~~~l~~---~~~~~l~~l~~lVlDE 243 (300)
T 3fmo_B 217 TPGTVLDWCSK---LKFIDPKKIKVFVLDE 243 (300)
T ss_dssp CHHHHHHHHTT---TCCCCGGGCSEEEETT
T ss_pred CHHHHHHHHHh---cCCCChhhceEEEEeC
Confidence 57777776643 2457889999999999
No 57
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=27.34 E-value=27 Score=25.40 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=16.7
Q ss_pred HHHHHHhCCccEEEEeecCCCc
Q psy10371 116 EKDIKEAGGIHLFVGGIGPDGH 137 (219)
Q Consensus 116 ~~~i~~~~~~Dl~lLG~G~DGH 137 (219)
+..+...+.+|++|+|.|..+.
T Consensus 59 ~~l~~~~p~pevliiGTG~~~~ 80 (135)
T 2fvt_A 59 QRVFDNANAIDTLIVGTGADVW 80 (135)
T ss_dssp HHHHHTTTSCSEEEEECTTSCC
T ss_pred HHHHhcCCCCCEEEEcCCCCCC
Confidence 3444444569999999999887
No 58
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=27.26 E-value=74 Score=28.30 Aligned_cols=47 Identities=9% Similarity=-0.087 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHH
Q psy10371 7 DDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIE 54 (219)
Q Consensus 7 ~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~ 54 (219)
.+.++..+.+.+.+.+.++..+.. ..++.+.||||-.=..+...+.+
T Consensus 217 ~~~~~~~~~l~~~L~~aV~~rl~s-d~~vgv~LSGGlDSS~vaala~~ 263 (513)
T 1jgt_A 217 LPEGEAVAAVRAALEKAVAQRVTP-GDTPLVVLSGGIDSSGVAACAHR 263 (513)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCT-TCCCEEECCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC-CCcEEEECCCcHHHHHHHHHHHH
Confidence 466788888888888888876654 66899999999765545444444
No 59
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=27.12 E-value=2e+02 Score=21.64 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+.+.+.+ ...++.+++.++-+||
T Consensus 153 Tp~~l~~~l~~---~~~~~~~~~~~lViDE 179 (236)
T 2pl3_A 153 TPGRLLQHMDE---TVSFHATDLQMLVLDE 179 (236)
T ss_dssp CHHHHHHHHHH---CSSCCCTTCCEEEETT
T ss_pred CHHHHHHHHHh---cCCcccccccEEEEeC
Confidence 34444444433 1245678888888999
No 60
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=25.89 E-value=1.5e+02 Score=21.40 Aligned_cols=47 Identities=21% Similarity=0.394 Sum_probs=27.4
Q ss_pred HHHHHHHHhhCCCCCCceEEEec---CCC-CHH-----HHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 18 RYVLKKITDFKPGPDNYFVLGLP---TGG-TPL-----GMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 18 ~~i~~~i~~~~~~~~~~~~i~ls---gGs-tp~-----~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+.|.+.+++... ..++|+|| -|+ +|. .+-+.|.+. + .+-+.++|||.
T Consensus 43 ~~l~~li~e~~v---~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-----~---~lpV~~~DERl 98 (138)
T 1nu0_A 43 NIIERLLKEWQP---DEIIVGLPLNMDGTEQPLTARARKFANRIHGR-----F---GVEVKLHDERL 98 (138)
T ss_dssp HHHHHHHHHHCC---SEEEEEEEECTTSCBCHHHHHHHHHHHHHHHH-----H---CCCEEEEEEEC
T ss_pred HHHHHHHHHcCC---CEEEEecccCCCcCcCHHHHHHHHHHHHHHHH-----h---CCCEEEEcCCc
Confidence 455555555433 24999988 343 333 333444431 2 47899999988
No 61
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=25.48 E-value=2.7e+02 Score=23.76 Aligned_cols=73 Identities=12% Similarity=0.025 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccccchHHHHHHHhcCCCCCCC
Q psy10371 15 WSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYGRNFLTKLFRHNFFSHIDIQ 94 (219)
Q Consensus 15 ~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v~~~~~~~~~~~l~~~~~i~ 94 (219)
.+|..-...++..++- .=+-++.||||.|...--..|..+-+...-+|. +.|-+. .-+++..++.+.-.
T Consensus 255 ~vA~~Tv~~L~rtvPp-aVpgI~fLSGGqSeeeAt~~LnamN~~~~~PW~-lsFSyg---------RALq~~~lk~W~Gk 323 (369)
T 2pc4_A 255 DVGFLTVRTLRRTVPP-ALPGVVFLSGGQSEEEASVNLNSINALGPHPWA-LTFSYG---------RALQASVLNTWQGK 323 (369)
T ss_dssp HHHHHHHHHHHHHCCT-TSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSE-EEEEES---------HHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhcCCc-cCCeeeeCCCCCCHHHHHHHHHHhhcCCCCCce-eEEehH---------HhhhhHHHHHhCCC
Confidence 4555555666666663 445688999999999988888874332234665 222221 12455555555544
Q ss_pred CCCe
Q psy10371 95 PENV 98 (219)
Q Consensus 95 ~~~i 98 (219)
++|+
T Consensus 324 ~env 327 (369)
T 2pc4_A 324 KENV 327 (369)
T ss_dssp TTTH
T ss_pred hHHH
Confidence 4554
No 62
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=25.09 E-value=1.7e+02 Score=24.76 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=14.0
Q ss_pred cCCCCCCceeEEeecc
Q psy10371 58 QGKISFKYVKTFNMDE 73 (219)
Q Consensus 58 ~~~i~w~~v~~~~~DE 73 (219)
...++.+++.++-+||
T Consensus 196 ~~~~~l~~~~~lVlDE 211 (434)
T 2db3_A 196 RTFITFEDTRFVVLDE 211 (434)
T ss_dssp TTSCCCTTCCEEEEET
T ss_pred hCCcccccCCeEEEcc
Confidence 4667889999999999
No 63
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=24.76 E-value=1.1e+02 Score=24.31 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=28.0
Q ss_pred CeEeCCCCCCCHHHHHHHHHHHHHHhCCccEEEEeec
Q psy10371 97 NVHILDGNAPDLHAECVQYEKDIKEAGGIHLFVGGIG 133 (219)
Q Consensus 97 ~i~~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G 133 (219)
+++.+..+..++++.-+..++.++++|++|+++---|
T Consensus 48 ~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 48 NLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNAC 84 (247)
T ss_dssp TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5666666666777777777888889999999997544
No 64
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=24.65 E-value=2.4e+02 Score=22.48 Aligned_cols=61 Identities=23% Similarity=0.280 Sum_probs=34.9
Q ss_pred EEEeCCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCC-----------------CHHHHHHHHHHHhhcCCCCCCc
Q psy10371 3 LIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGG-----------------TPLGMYKKLIEYHQQGKISFKY 65 (219)
Q Consensus 3 i~v~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGs-----------------tp~~~y~~L~~~~~~~~i~w~~ 65 (219)
+++.++. +++...++.+.+.... .+.-+..+.||. ||..+++.+. ...+..++
T Consensus 78 lil~P~~-~L~~q~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~iiv~T~~~l~~~~~----~~~~~~~~ 147 (367)
T 1hv8_A 78 IILTPTR-ELAIQVADEIESLKGN-----KNLKIAKIYGGKAIYPQIKALKNANIVVGTPGRILDHIN----RGTLNLKN 147 (367)
T ss_dssp EEECSCH-HHHHHHHHHHHHHHCS-----SCCCEEEECTTSCHHHHHHHHHTCSEEEECHHHHHHHHH----TTCSCTTS
T ss_pred EEEcCCH-HHHHHHHHHHHHHhCC-----CCceEEEEECCcchHHHHhhcCCCCEEEecHHHHHHHHH----cCCccccc
Confidence 4556655 4555555555554432 222344555554 3444444433 35677899
Q ss_pred eeEEeecc
Q psy10371 66 VKTFNMDE 73 (219)
Q Consensus 66 v~~~~~DE 73 (219)
+.++.+||
T Consensus 148 ~~~iIiDE 155 (367)
T 1hv8_A 148 VKYFILDE 155 (367)
T ss_dssp CCEEEEET
T ss_pred CCEEEEeC
Confidence 99999999
No 65
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=24.64 E-value=2e+02 Score=25.46 Aligned_cols=57 Identities=12% Similarity=0.024 Sum_probs=35.1
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc-cchHHHHHHHhcCCCCCCC
Q psy10371 32 DNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG-RNFLTKLFRHNFFSHIDIQ 94 (219)
Q Consensus 32 ~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v-~~~~~~~~~~~l~~~~~i~ 94 (219)
.+++.+++|||..=.-+...|.+.. . .+++.+.+|... .........+.|-+.++++
T Consensus 230 ~~kvlvalSGGvDSsvla~ll~~~~-----G-~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~ 287 (527)
T 3tqi_A 230 KEQVIVGLSGGVDSAVTATLVHKAI-----G-DQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAK 287 (527)
T ss_dssp TSCEEEECTTTHHHHHHHHHHHHHH-----G-GGEEEEEECCSCSCTTHHHHHHHHHTTSSCCE
T ss_pred CCeEEEEEecCcCHHHHHHHHHHHh-----C-CeEEEEEeccCCCChhHHHHHHHHHHHHcCCc
Confidence 3569999999976555555555421 1 368888888855 3222223345566667763
No 66
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=24.50 E-value=2.9e+02 Score=22.54 Aligned_cols=26 Identities=38% Similarity=0.549 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+++.+.. ..+..+++.++.+||
T Consensus 166 T~~~l~~~l~~----~~~~~~~~~~vViDE 191 (414)
T 3eiq_A 166 TPGRVFDMLNR----RYLSPKYIKMFVLDE 191 (414)
T ss_dssp CHHHHHHHHHH----TSSCSTTCCEEEECS
T ss_pred CHHHHHHHHHc----CCcccccCcEEEEEC
Confidence 45556665544 567788899999999
No 67
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=24.49 E-value=64 Score=28.58 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHH
Q psy10371 7 DDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYK 50 (219)
Q Consensus 7 ~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~ 50 (219)
.+.++..+.+.+.+.+.++..... ..++.+.||||-.=..+..
T Consensus 214 ~~~~~~~~~l~~~L~~aV~~rl~s-d~~v~v~LSGGlDSs~vaa 256 (503)
T 1q15_A 214 LPREPLLALIDRYLNAPLEDLAPR-FDTVGIPLSGGLDSSLVTA 256 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGG-CSEEEEECCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC-CCcEEEECCCCHHHHHHHH
Confidence 356777788888888877776544 6789999999965443333
No 68
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=24.15 E-value=1.2e+02 Score=24.01 Aligned_cols=39 Identities=13% Similarity=0.059 Sum_probs=28.4
Q ss_pred CceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 33 NYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 33 ~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+++.+++|||..-..+...+.+.... =.++.++++|.-.
T Consensus 42 ~~v~va~SGGkDS~vLL~ll~~~~~~----~~~i~vv~iDtg~ 80 (261)
T 2oq2_A 42 PHLFQTTAFGLTGLVTIDMLSKLSEK----YYMPELLFIDTLH 80 (261)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHTTT----SCCCEEEEECCSC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhCcc----CCCeeEEEecCCC
Confidence 46999999998888888877764221 1357888999833
No 69
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=23.95 E-value=37 Score=27.10 Aligned_cols=44 Identities=20% Similarity=0.198 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCCCHHHHHHHHHHHhh
Q psy10371 7 DDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGGTPLGMYKKLIEYHQ 57 (219)
Q Consensus 7 ~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstp~~~y~~L~~~~~ 57 (219)
+|.+++=+.+|+.-++.++. .-+|+|-+|||-.-+-+.|.+..+
T Consensus 2 ~~qd~~K~~aa~~A~~~V~~-------gmvvGlGTGSTv~~~i~~L~~~~~ 45 (228)
T 4gmk_A 2 PNQDELKQLVGTKAVEWIKD-------GMIVGLGTGSTVKYMVDALGKRVN 45 (228)
T ss_dssp CHHHHHHHHHHHHHGGGCCT-------TCEEEECCSHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhCCC-------CCEEEECchHHHHHHHHHHHHHHh
Confidence 35566666777666554322 269999999999998899987654
No 70
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=23.37 E-value=3.2e+02 Score=22.63 Aligned_cols=104 Identities=11% Similarity=0.060 Sum_probs=56.4
Q ss_pred HHHHhhCCCCC---CceEEEecCCCCHHHHHHHHHHHhhc------C------C---CCCCceeEEeecc-cc-cch--H
Q psy10371 22 KKITDFKPGPD---NYFVLGLPTGGTPLGMYKKLIEYHQQ------G------K---ISFKYVKTFNMDE-YG-RNF--L 79 (219)
Q Consensus 22 ~~i~~~~~~~~---~~~~i~lsgGstp~~~y~~L~~~~~~------~------~---i~w~~v~~~~~DE-~v-~~~--~ 79 (219)
..|+++.++-+ +...++.|||..-.-+...+.+.... . . .+-..+.++++|- +. ++- +
T Consensus 45 ~iLrea~~~f~~~~~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvifiDTG~~FpET~ef 124 (308)
T 3fwk_A 45 ILINETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTVFIDHDDTFKTLENF 124 (308)
T ss_dssp HHHHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHcccccCCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccEEEEeCCCCCHHHHHH
Confidence 45555555412 46999999998877777777654210 0 0 1114688999999 66 444 4
Q ss_pred HHHHHHhcCCCCCCCCCCeEeCCCCC-CCHHHHHHHHHHHHHHhCCccEEEEeecCC
Q psy10371 80 TKLFRHNFFSHIDIQPENVHILDGNA-PDLHAECVQYEKDIKEAGGIHLFVGGIGPD 135 (219)
Q Consensus 80 ~~~~~~~l~~~~~i~~~~i~~~~~~~-~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~D 135 (219)
...+.+.+ ++ +++...... ....+.| .+.++..+++|..+.|+=.|
T Consensus 125 ~d~~~~~y----gL---~L~v~~p~~~~~~~~~c---c~~~K~~P~~~AwitG~RR~ 171 (308)
T 3fwk_A 125 IEETSLRY----SL---SLYESDRDKCETMAEAF---ETFLQVFPETKAIVIGIRHT 171 (308)
T ss_dssp HHHHHHHT----TE---EEEECCTTSCCCHHHHH---HHHHHHCTTCCEEECCCCTT
T ss_pred HHHHHHHh----CC---cEEEeCCCCCHHHHHHH---HHHHHhCCCCCEEEEEeecC
Confidence 44555544 22 333333221 1123333 33444445699999998765
No 71
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=23.36 E-value=87 Score=27.36 Aligned_cols=52 Identities=13% Similarity=0.174 Sum_probs=34.5
Q ss_pred HHHHHHhh--CCCCCCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 20 VLKKITDF--KPGPDNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 20 i~~~i~~~--~~~~~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
+.+.|++. ++. ..++.||+|||..-..+...|.+..... .+ ++..+.+|...
T Consensus 5 v~~~i~~~~l~~~-~~~vlVa~SGG~DS~~Ll~ll~~~~~~~--~~-~v~avhvdhgl 58 (464)
T 3a2k_A 5 VRAFIHRHQLLSE-GAAVIVGVSGGPDSLALLHVFLSLRDEW--KL-QVIAAHVDHMF 58 (464)
T ss_dssp HHHHHHHTCSSSC-SSBEEEECCSSHHHHHHHHHHHHHHHTT--TC-BCEEEEEECTT
T ss_pred HHHHHHHcCCCCC-CCEEEEEEcCcHHHHHHHHHHHHHHHHc--CC-eEEEEEEECCC
Confidence 44445443 333 6689999999988777777777643322 22 57888888754
No 72
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=23.13 E-value=87 Score=28.63 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCceEEEecCCC
Q psy10371 9 VSNVAEWSARYVLKKITDFKPGPDNYFVLGLPTGG 43 (219)
Q Consensus 9 ~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGs 43 (219)
.+++.+.++..+.+.+++.- .+.++|+||||-
T Consensus 283 ~~~~~~~~~~~l~d~~~~~g---~~~vvlglSGGv 314 (634)
T 3ilv_A 283 EFEFWEATSLGLFDYMRKSR---SKGFVLSLSGGA 314 (634)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---CCSEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHHHHhC---CCeEEEEccCCH
Confidence 57888888888888888742 446999999994
No 73
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=23.11 E-value=26 Score=23.36 Aligned_cols=14 Identities=36% Similarity=0.389 Sum_probs=12.4
Q ss_pred cCCCcccccCCCCC
Q psy10371 133 GPDGHIAFNEPGSS 146 (219)
Q Consensus 133 G~DGHiaslfP~~~ 146 (219)
-.|||.+..|||.+
T Consensus 45 ~ddGHe~lv~PGPD 58 (83)
T 2a7y_A 45 LVNGHETTVYPGSD 58 (83)
T ss_dssp TTTTEEEEECCCSS
T ss_pred cCCCcEEEEecCCC
Confidence 58999999999964
No 74
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.71 E-value=1.8e+02 Score=19.54 Aligned_cols=49 Identities=20% Similarity=0.106 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEEec----CCCCHH-----HHHHHHHHHhhcCCCCCCceeEEeecccc
Q psy10371 15 WSARYVLKKITDFKPGPDNYFVLGLP----TGGTPL-----GMYKKLIEYHQQGKISFKYVKTFNMDEYG 75 (219)
Q Consensus 15 ~~a~~i~~~i~~~~~~~~~~~~i~ls----gGstp~-----~~y~~L~~~~~~~~i~w~~v~~~~~DE~v 75 (219)
...+.|.+.+++.... .++|+|| |-.+|. .+-+.|.+ . .+-+.++|||.
T Consensus 38 ~~~~~l~~li~e~~v~---~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~----~-----~lpV~~~DERl 95 (98)
T 1iv0_A 38 EDVEALLDFVRREGLG---KLVVGLPLRTDLKESAQAGKVLPLVEALRA----R-----GVEVELWDERF 95 (98)
T ss_dssp HHHHHHHHHHHHHTCC---EEEEECCCCCCSSSCCCSSTTHHHHHHHHH----T-----TCEEEEECCSC
T ss_pred HHHHHHHHHHHHcCCC---EEEEeeccCCCCCcCHHHHHHHHHHHHHhc----C-----CCCEEEECCCC
Confidence 3445556666554332 4899987 333332 23444443 1 47899999975
No 75
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=21.39 E-value=1.6e+02 Score=22.33 Aligned_cols=28 Identities=25% Similarity=0.203 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 44 TPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 44 tp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
||..+...+... ...++++++.++-+||
T Consensus 156 Tp~~l~~~l~~~--~~~~~~~~~~~lViDE 183 (245)
T 3dkp_A 156 TPNRLIYLLKQD--PPGIDLASVEWLVVDE 183 (245)
T ss_dssp CHHHHHHHHHSS--SCSCCCTTCCEEEESS
T ss_pred CHHHHHHHHHhC--CCCcccccCcEEEEeC
Confidence 477777766541 1246789999999999
No 76
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=20.03 E-value=2.5e+02 Score=20.10 Aligned_cols=42 Identities=17% Similarity=0.033 Sum_probs=31.2
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHhhcCCCCCCceeEEeecc
Q psy10371 32 DNYFVLGLPTGGTPLGMYKKLIEYHQQGKISFKYVKTFNMDE 73 (219)
Q Consensus 32 ~~~~~i~lsgGstp~~~y~~L~~~~~~~~i~w~~v~~~~~DE 73 (219)
.....+.++-|.+|..+++.+.+..+..++|-.+=.++++|=
T Consensus 31 ~~~~aid~~~~~~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm 72 (139)
T 3gdw_A 31 SIGTAMNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDM 72 (139)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHTSTGGGTTCEEEEECS
T ss_pred ccEEEEEccCCCCHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 345788999999999999999987764334444556777774
Done!