Query psy10372
Match_columns 63
No_of_seqs 107 out of 809
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 16:12:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10372.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10372hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3148|consensus 99.8 1E-22 2.2E-27 137.7 0.5 62 1-62 138-199 (273)
2 PRK02122 glucosamine-6-phospha 99.7 1.3E-17 2.9E-22 125.4 5.3 62 1-63 166-227 (652)
3 PTZ00285 glucosamine-6-phospha 99.7 5.4E-17 1.2E-21 109.7 5.9 63 1-63 138-200 (253)
4 PRK12358 putative 6-phosphoglu 99.7 6.1E-17 1.3E-21 108.8 6.0 63 1-63 126-190 (239)
5 PRK09762 galactosamine-6-phosp 99.7 1.4E-16 3.1E-21 106.9 5.2 60 1-63 132-191 (232)
6 COG0363 NagB 6-phosphogluconol 99.6 2.9E-16 6.2E-21 106.6 3.2 55 1-63 134-189 (238)
7 TIGR00502 nagB glucosamine-6-p 99.6 1.4E-15 3E-20 103.0 5.8 63 1-63 138-200 (259)
8 PRK00443 nagB glucosamine-6-ph 99.2 1.9E-11 4.2E-16 81.8 5.8 63 1-63 138-200 (261)
9 PF01182 Glucosamine_iso: Gluc 99.2 1.7E-12 3.8E-17 85.2 0.7 53 1-63 130-182 (199)
10 cd01399 GlcN6P_deaminase GlcN6 99.2 2.5E-11 5.5E-16 79.6 6.1 62 1-63 124-185 (232)
11 cd01400 6PGL 6PGL: 6-Phosphogl 99.2 3.3E-11 7.1E-16 80.1 4.2 50 1-63 127-179 (219)
12 PLN02360 probable 6-phosphoglu 99.1 9.4E-11 2E-15 80.1 3.9 50 1-63 158-209 (268)
13 TIGR01198 pgl 6-phosphoglucono 99.0 2E-10 4.3E-15 77.1 3.6 51 1-63 134-185 (233)
14 KOG3147|consensus 74.2 4.4 9.6E-05 28.4 3.2 49 1-62 150-200 (252)
15 PF00098 zf-CCHC: Zinc knuckle 68.0 2.9 6.2E-05 17.8 0.7 11 2-12 7-17 (18)
16 COG4517 Uncharacterized protei 50.3 10 0.00022 23.3 1.2 47 1-49 26-74 (109)
17 PF12503 CMV_1a_C: Cucumber mo 42.2 25 0.00054 20.9 2.0 19 7-25 50-70 (85)
18 PF13917 zf-CCHC_3: Zinc knuck 36.8 16 0.00034 18.9 0.5 12 2-13 11-22 (42)
19 KOG3180|consensus 33.3 21 0.00045 24.9 0.8 15 44-61 188-202 (254)
20 cd06394 PBP1_iGluR_Kainate_KA1 33.0 36 0.00078 23.9 2.0 25 2-26 291-315 (333)
21 PF11790 Glyco_hydro_cc: Glyco 32.5 27 0.00059 23.3 1.3 13 7-19 70-82 (239)
22 COG5082 AIR1 Arginine methyltr 31.2 22 0.00047 24.0 0.6 11 2-12 67-77 (190)
23 PF00659 POLO_box: POLO box du 29.1 39 0.00084 18.1 1.3 18 3-25 12-29 (68)
24 PHA02256 hypothetical protein 28.5 23 0.00049 21.8 0.3 7 7-13 75-81 (113)
25 cd06381 PBP1_iGluR_delta_like 27.6 60 0.0013 22.9 2.4 26 2-27 317-342 (363)
26 cd06383 PBP1_iGluR_AMPA_Like N 26.2 32 0.0007 24.3 0.8 20 2-21 337-358 (368)
27 cd06367 PBP1_iGluR_NMDA N-term 26.1 68 0.0015 21.9 2.4 25 2-26 314-338 (362)
28 KOG4637|consensus 25.2 28 0.00061 26.2 0.4 12 3-14 77-88 (464)
29 cd00498 Hsp33 Heat shock prote 24.4 96 0.0021 21.4 2.9 50 1-54 107-158 (275)
30 PF10907 DUF2749: Protein of u 22.1 82 0.0018 17.9 1.8 18 25-42 35-52 (66)
31 TIGR03769 P_ac_wall_RPT actino 21.6 43 0.00092 16.9 0.5 11 5-15 5-15 (41)
32 KOG3041|consensus 21.2 75 0.0016 22.0 1.8 11 7-17 142-153 (225)
No 1
>KOG3148|consensus
Probab=99.85 E-value=1e-22 Score=137.73 Aligned_cols=62 Identities=79% Similarity=1.163 Sum_probs=60.6
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhccccc
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQER 62 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~i 62 (63)
||.+|||||||||+++-|+||+..|..+|+.+|+|+|++++..||++|+|.|++|+|.||++
T Consensus 138 igpdghiafnepgsslvsrtrvktla~dti~anarffdgd~tkvpt~altvgvgtvmdarev 199 (273)
T KOG3148|consen 138 IGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLTKVPTQALTVGVGTVMDAREV 199 (273)
T ss_pred cCCCCceeeCCCcchhhhhhhHHHHhHHHHHhhceecCCccccCccceeEeeeeeeeecceE
Confidence 79999999999999999999999999999999999999999999999999999999999986
No 2
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=99.70 E-value=1.3e-17 Score=125.39 Aligned_cols=62 Identities=48% Similarity=0.699 Sum_probs=57.6
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||+++++.+|+|.|++.|+.+++..|++ .+.+|.++||||+++||+||+|+
T Consensus 166 iG~DGHiAsnfPgs~~~s~tr~v~l~~~tr~~aa~~f~~-~~~~P~~rITmgi~~I~~Ar~Ii 227 (652)
T PRK02122 166 IGRTGHIGFNEPGSGRNSRTRLVTLDHITRRDAASDFFG-EENVPRKAITMGVGTILKARRIV 227 (652)
T ss_pred CCCCCceeccCCCCcccccceEEEccchhhhhhccccCC-CCCCCCceEEeCHHHHHhhCeEE
Confidence 799999999999999999999999999999988777764 68899999999999999999985
No 3
>PTZ00285 glucosamine-6-phosphate isomerase; Provisional
Probab=99.68 E-value=5.4e-17 Score=109.67 Aligned_cols=63 Identities=73% Similarity=1.084 Sum_probs=57.1
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|.|||+|||+|++++++.+|+|.+++.|+..++.+|+.+.+.+|.+.||||++.|++||+|+
T Consensus 138 ~G~DGH~AslfP~~~~~~~~~~v~~~~~t~~~~~~~~~~~~~~~p~~riTlt~~~i~~a~~i~ 200 (253)
T PTZ00285 138 IGTDGHIAFNEPGSSLDSRTRVKSLNQETIDANARFFGNDISKVPTMALTVGIRTIMEAREVL 200 (253)
T ss_pred CCCCCceeecCCCCccCCceEEEECCHHHHHHHhhhccCCcCCCCCccEEcCHHHHHhCCEEE
Confidence 699999999999999999999999999999888888854456789999999999999999985
No 4
>PRK12358 putative 6-phosphogluconolactonase; Provisional
Probab=99.68 E-value=6.1e-17 Score=108.81 Aligned_cols=63 Identities=27% Similarity=0.419 Sum_probs=54.3
Q ss_pred CCcCceeeccCCC-CCCCCceEEEeCCHHHHHHH-hhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPG-SSLASRTRLKTLAQETLEAN-ARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg-~~~~~~t~~v~l~~~t~~~~-~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|+|||+|||+|| +.|++.+|+|.+++.|+.++ .+.|.++.+.+|.++||||+++|++||+|+
T Consensus 126 ~G~DGH~As~fPg~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~P~~riTlt~~~i~~A~~i~ 190 (239)
T PRK12358 126 LGADGHFCGNLPGTTHFHDETVEVPIQGEMVDIVAHGELGGDFSLVPDSYVTMGPKSIMAAKNLL 190 (239)
T ss_pred cCCCCceeecCCCCCcCCCceEEEECcHHHHHHhhhhhccCCcccCCCeeEEcchHHHHhCCEEE
Confidence 6999999999999 56899999999999998763 345543567899999999999999999985
No 5
>PRK09762 galactosamine-6-phosphate isomerase; Provisional
Probab=99.65 E-value=1.4e-16 Score=106.89 Aligned_cols=60 Identities=27% Similarity=0.558 Sum_probs=51.6
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|.|||+|||||++++.+.++++.|++.++... .|. +.+.+|.+.||||++.||+||+|+
T Consensus 132 mG~DGH~A~n~P~~slfp~~~~~~l~~~~~~~~--~~~-~~~~~p~~riTlt~~~i~~A~~i~ 191 (232)
T PRK09762 132 LGKNGHLGLNEPGESLQPACHISQLDARTQQHE--MLK-TAGRPVTRGITLGLKDILNAREVL 191 (232)
T ss_pred cCCCCceecCCCCCCCCCCceeeeccHhhhhhh--ccC-CCCCCCCccEEeCHHHHHhcCEEE
Confidence 699999999999999999999999999886533 233 246789999999999999999985
No 6
>COG0363 NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]
Probab=99.61 E-value=2.9e-16 Score=106.65 Aligned_cols=55 Identities=53% Similarity=0.715 Sum_probs=48.4
Q ss_pred CCcCceeeccCCCCC-CCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~-~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|.|||||||+|+++ |.+.| +.+++.++|..+.+.+|+++||||+++||+||+|+
T Consensus 134 ~G~DGHias~fP~~~~l~~~~--------~~~~~~~~~~~~~~~~P~~riTlt~~~I~~Ak~v~ 189 (238)
T COG0363 134 MGEDGHIASLFPGTPALDSAT--------TEEANSRVFVGDSPKVPKERITLTLPTILDAKEVL 189 (238)
T ss_pred ccCCCcccccCCCCccccccc--------chhhceeeecCCCCCCCcceEEeCHHHHhcCCeEE
Confidence 699999999999977 99888 55677788876667899999999999999999984
No 7
>TIGR00502 nagB glucosamine-6-phosphate isomerase. The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.
Probab=99.60 E-value=1.4e-15 Score=102.99 Aligned_cols=63 Identities=68% Similarity=1.156 Sum_probs=56.7
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|++.+.+.++++.+++.++..+.++|+.+.+.+|++.||||++.|++||+|+
T Consensus 138 ~G~DGH~As~fP~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~riTlt~~~i~~a~~vi 200 (259)
T TIGR00502 138 IGPDGHIAFNEPGSSLTSRTRIKTLTEDTIQANSRFFEGDVNQVPKYALTVGIGTILDSKEVL 200 (259)
T ss_pred cCCCCceecCCCCCCCCCceEEEEcchhhHHHHhhhhcCCCCCCCCceEecCHHHHhhCCEEE
Confidence 799999999999999999999999999998777788865556689999999999999999975
No 8
>PRK00443 nagB glucosamine-6-phosphate deaminase; Provisional
Probab=99.24 E-value=1.9e-11 Score=81.82 Aligned_cols=63 Identities=70% Similarity=1.067 Sum_probs=55.7
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.+||+|+|+|++.+.+.++++.|.+.++....++|+.+.+.+|.+.||||++.|++||++|
T Consensus 138 iG~dgh~aslfp~~~~~~~~~~~~l~~~~~~~~~~~~d~~g~~~~~~~itl~l~~L~~a~~vi 200 (261)
T PRK00443 138 IGENGHIAFNEPGSSFASRTRIKTLTEDTRIANSRFFDGDIEQVPKYALTVGVGTILDAKEIM 200 (261)
T ss_pred cCCCCcccccCCCCCCCCCeEEEEccHhhHHHHHhhcCCCccCCCCeeEEcCHHHHHhcCeEE
Confidence 799999999999998999999999999877667788875456789999999999999999875
No 9
>PF01182 Glucosamine_iso: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; InterPro: IPR006148 This domain is characteristic of the enzymes 6-phosphogluconolactonase (3.1.1.31 from EC), Glucosamine-6-phosphate isomerase (3.5.99.6 from EC), and Galactosamine-6-phosphate isomerase. 6-Phosphogluconolactonase is the enzyme responsible for the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate, the second step in the pentose phosphate pathway. Glucosamine-6-phosphate isomerase (or Glucosamine 6-phosphate deaminase) is the enzyme responsible for the conversion of D-glucosamine 6-phosphate into D-fructose 6-phosphate []. It is the last specific step in the pathway for N-acetylglucosamine (GlcNAC) utilization in bacteria such as Escherichia coli (gene nagB) or in fungi such as Candida albicans (gene NAG1).; GO: 0005975 carbohydrate metabolic process; PDB: 3CSS_A 3CH7_A 1Y89_B 3TX2_A 2BKX_B 2BKV_B 3E15_B 1HOR_B 1JT9_A 1HOT_A ....
Probab=99.23 E-value=1.7e-12 Score=85.16 Aligned_cols=53 Identities=30% Similarity=0.378 Sum_probs=33.4
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||+.... +++.+ ....+. +...+|.+.||||+++||+||+|+
T Consensus 130 ~G~DGH~aslfPg~~~~~--------~~~~~-~~~~~~-~~~~~p~~riTlt~~~i~~a~~i~ 182 (199)
T PF01182_consen 130 MGEDGHTASLFPGSPALL--------EESER-WVVAVT-DSPKPPPQRITLTLPTIMSARKIV 182 (199)
T ss_dssp --TTS-BTTB-TTCHTTH--------HHHSS-SSEEEE-CCTTSSSEEEEE-HHHHHTSSEEE
T ss_pred cccCCCeeccCCCCcccc--------ccccc-eEEEec-CCCCCCcceEEeCHHHHHhcCEEE
Confidence 699999999999976633 11101 111222 236789999999999999999985
No 10
>cd01399 GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.
Probab=99.23 E-value=2.5e-11 Score=79.56 Aligned_cols=62 Identities=63% Similarity=1.005 Sum_probs=54.2
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.+||+|+|+|++.+.+.++++.|++.....+.++|+.+ +.+|.+.|||+++.|++|++++
T Consensus 124 iG~dgh~as~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~itltl~~l~~a~~vi 185 (232)
T cd01399 124 IGENGHIGFNEPGSSLDSRTRVVTLDESTRQANARFFDGD-EDVPTQAITMGIGTIMKAKEIL 185 (232)
T ss_pred CCCCceeeecCCCCCCCCceEEEECCHHhHHHHhhhcCCc-CCCCCceEecCHHHHhhCCEEE
Confidence 7999999999999888888899999988876677788643 6789999999999999999875
No 11
>cd01400 6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.
Probab=99.16 E-value=3.3e-11 Score=80.09 Aligned_cols=50 Identities=30% Similarity=0.479 Sum_probs=39.2
Q ss_pred CCcCceeeccCCCCCCC--CceE-EEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLA--SRTR-LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~--~~t~-~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|.|||+|+|+|++++. ..++ ++.++ . ...+|...||||++.|++||+|+
T Consensus 127 mG~DGH~ASlfP~~~~~~~~~~~~v~~~~-----------~--~~~~p~~RiTlt~~~i~~a~~i~ 179 (219)
T cd01400 127 MGPDGHTASLFPGHPALLEETDRLVVAVT-----------D--SPKPPPERITLTLPVLNNARRVV 179 (219)
T ss_pred CcCCCceeecCCCCcccccccCceEEEEe-----------C--CCCCCCccEEecHHHHhcCCeEE
Confidence 69999999999998775 5554 44432 1 13478999999999999999985
No 12
>PLN02360 probable 6-phosphogluconolactonase
Probab=99.09 E-value=9.4e-11 Score=80.12 Aligned_cols=50 Identities=26% Similarity=0.400 Sum_probs=37.8
Q ss_pred CCcCceeeccCCCCC-CCCceE-EEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSS-LASRTR-LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~-~~~~t~-~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|.|||+|+|+||++ ++...+ ++.+ . +...+|.+.||||++.|++||+|+
T Consensus 158 mG~DGHtASlFPg~~~l~~~~~~v~~~------------~-~~~~~p~~RITlt~~~i~~A~~i~ 209 (268)
T PLN02360 158 MGSDGHVASLFPNHPALEEKDDWVTFI------------T-DSPKPPPERITFTLPVINSASNVA 209 (268)
T ss_pred cCCCCceeccCCCCchhhhccceEEee------------c-CCCCCCCceEEEcHHHHhcCCeEE
Confidence 699999999999965 444432 2222 1 125578899999999999999985
No 13
>TIGR01198 pgl 6-phosphogluconolactonase. This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with
Probab=99.03 E-value=2e-10 Score=77.11 Aligned_cols=51 Identities=31% Similarity=0.487 Sum_probs=37.9
Q ss_pred CCcCceeeccCCCCC-CCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~-~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
+|.|||+|+|.||++ ++..++.+.. .. +.+.+|.+.||||++.|++||+|+
T Consensus 134 mG~DGHtASlFPg~~~l~~~~~~~~~-----------~~-~~~~~p~~RITlt~~~i~~a~~i~ 185 (233)
T TIGR01198 134 MGPDGHTASLFPHTPALQETERLVTV-----------LT-KSPKPPHERITLTLPAINAARKVF 185 (233)
T ss_pred CcCCccceeCCCCChhhccccceEEe-----------ec-CCCCCCCCcEEecHHHHhcCCeEE
Confidence 699999999999965 3333333221 11 236688899999999999999985
No 14
>KOG3147|consensus
Probab=74.25 E-value=4.4 Score=28.40 Aligned_cols=49 Identities=27% Similarity=0.434 Sum_probs=34.5
Q ss_pred CCcCceeeccCCC-CCCCCce-EEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhccccc
Q psy10372 1 IGPDGHIAFNEPG-SSLASRT-RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQER 62 (63)
Q Consensus 1 iG~nGHiafNePg-~~~~~~t-~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~i 62 (63)
.|.|||+|===|+ ..++... +++.++. -...|+.=||+.+..|-.|+++
T Consensus 150 ~GpDGHtaSLFP~~~~l~e~~~wV~~itd-------------SPkpPp~RITlTLPvIn~A~~v 200 (252)
T KOG3147|consen 150 MGPDGHTASLFPGHPLLNEKLKWVVPITD-------------SPKPPPKRITLTLPVINHAKNV 200 (252)
T ss_pred cCCCCCeeecCCCchhhhcccCEEEEeCC-------------CCCCCCccEEEehHHhhhhhce
Confidence 5899999977777 4444333 4444421 1347888999999999999876
No 15
>PF00098 zf-CCHC: Zinc knuckle; InterPro: IPR001878 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the CysCysHisCys (CCHC) type zinc finger domains, and have the sequence: C-X2-C-X4-H-X4-C where X can be any amino acid, and number indicates the number of residues. These 18 residues CCHC zinc finger domains are mainly found in the nucleocapsid protein of retroviruses. It is required for viral genome packaging and for early infection process [, , ]. It is also found in eukaryotic proteins involved in RNA binding or single-stranded DNA binding []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 2L44_A 1A1T_A 1WWG_A 1U6P_A 1WWD_A 1WWE_A 1A6B_B 1F6U_A 1MFS_A 1NCP_C ....
Probab=68.02 E-value=2.9 Score=17.78 Aligned_cols=11 Identities=55% Similarity=0.848 Sum_probs=8.8
Q ss_pred CcCceeeccCC
Q psy10372 2 GPDGHIAFNEP 12 (63)
Q Consensus 2 G~nGHiafNeP 12 (63)
|+.||++-+-|
T Consensus 7 ~~~GH~~~~Cp 17 (18)
T PF00098_consen 7 GEPGHIARDCP 17 (18)
T ss_dssp SCSSSCGCTSS
T ss_pred CCcCcccccCc
Confidence 67899988765
No 16
>COG4517 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.33 E-value=10 Score=23.34 Aligned_cols=47 Identities=21% Similarity=0.231 Sum_probs=25.5
Q ss_pred CCcCceeeccCCC-CCCCCceEE-EeCCHHHHHHHhhccCCCcCCCCCeeE
Q psy10372 1 IGPDGHIAFNEPG-SSLASRTRL-KTLAQETLEANARFFDNDIKKVPKEAL 49 (63)
Q Consensus 1 iG~nGHiafNePg-~~~~~~t~~-v~l~~~t~~~~~~~f~~~~~~vP~~ai 49 (63)
|+..--|||||=. --|++++-+ |+-+++-.+. .+-+-...-+|-+||
T Consensus 26 i~sS~LwGF~EI~efVFd~~s~lvVDPseEkLk~--eF~gv~rs~~Pmhai 74 (109)
T COG4517 26 IISSHLWGFNEISEFVFDVHSGLVVDPSEEKLKH--EFAGVKRSHLPMHAI 74 (109)
T ss_pred HhhhhhhhhhhHHHHhcccccceEECccHHHHHH--HhhccccccCcceeE
Confidence 3455568999955 456777654 4444443332 122212244777766
No 17
>PF12503 CMV_1a_C: Cucumber mosaic virus 1a protein C terminal ; InterPro: IPR022184 This domain family is found in viruses, and is approximately 90 amino acids in length. The family is found in association with PF01443 from PFAM, PF01660 from PFAM. There is a conserved GLG sequence motif. 1a protein is the major virulence factor of the (Cucumber mosaic virus. The Ns strain of CMV causes necrotic lesions to Nicotiana spp. while other strains cause systemic mosaic. The determinant of the pathogenesis of these different strains is the specific amino acid residue at the 461 residue of the 1a protein. ; GO: 0008168 methyltransferase activity, 0016817 hydrolase activity, acting on acid anhydrides
Probab=42.19 E-value=25 Score=20.92 Aligned_cols=19 Identities=16% Similarity=0.396 Sum_probs=15.2
Q ss_pred eeccCCC--CCCCCceEEEeC
Q psy10372 7 IAFNEPG--SSLASRTRLKTL 25 (63)
Q Consensus 7 iafNePg--~~~~~~t~~v~l 25 (63)
+||||-| ..+++...+|.-
T Consensus 50 VGyNe~GLGpK~~~ElyiVnk 70 (85)
T PF12503_consen 50 VGYNESGLGPKFDGELYIVNK 70 (85)
T ss_pred eeecCCCCCcCcCCeEEEEcC
Confidence 6899998 778888887763
No 18
>PF13917 zf-CCHC_3: Zinc knuckle
Probab=36.80 E-value=16 Score=18.89 Aligned_cols=12 Identities=33% Similarity=0.814 Sum_probs=10.2
Q ss_pred CcCceeeccCCC
Q psy10372 2 GPDGHIAFNEPG 13 (63)
Q Consensus 2 G~nGHiafNePg 13 (63)
|..||+.|.-|.
T Consensus 11 ~~~GH~tyeC~~ 22 (42)
T PF13917_consen 11 GQKGHWTYECPN 22 (42)
T ss_pred CCCCcchhhCCC
Confidence 578999999984
No 19
>KOG3180|consensus
Probab=33.34 E-value=21 Score=24.89 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=12.6
Q ss_pred CCCeeEEeCHHHHhcccc
Q psy10372 44 VPKEALTVGVGTVMDAQE 61 (63)
Q Consensus 44 vP~~aiTmGi~tIm~Ak~ 61 (63)
.|+|| ++..||+||+
T Consensus 188 ~PRya---~LpniMKAkk 202 (254)
T KOG3180|consen 188 TPRYA---TLPNIMKAKK 202 (254)
T ss_pred Ccccc---ccHHHHHhcc
Confidence 68876 7899999986
No 20
>cd06394 PBP1_iGluR_Kainate_KA1_2 N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the KA1 and KA2 subunits of Kainate receptor. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the KA1 and KA2 subunits of Kainate receptor. While this N-terminal domain belongs to the periplasmic-binding fold type I superfamily, the glutamate-binding domain of the iGluR is structurally homologous to the periplasmic-binding fold type II. The LIVBP-like domain of iGluRs is thought to play a role in the initial assembly of iGluR subunits, but it is not well understood how this domain is arranged and functions in intact iGluR. There are five types of kainate receptors, GluR5, GluR6, GluR7, KA1, and KA2, which are structurally similar to AMPA and NMDA subunits of ionotropic glutamate receptors. KA1 and KA2 subunits can only form functional receptors with one of the GluR5-7 subunits. Moreover, GluR5-7 can also form functional homomeric receptor channels act
Probab=32.96 E-value=36 Score=23.94 Aligned_cols=25 Identities=24% Similarity=0.383 Sum_probs=19.3
Q ss_pred CcCceeeccCCCCCCCCceEEEeCC
Q psy10372 2 GPDGHIAFNEPGSSLASRTRLKTLA 26 (63)
Q Consensus 2 G~nGHiafNePg~~~~~~t~~v~l~ 26 (63)
|-.|||-|||-|-.-+=.-++++|.
T Consensus 291 glTg~i~f~~~g~R~~~~l~v~~l~ 315 (333)
T cd06394 291 GLTGRIEFNSKGQRSNYTLKILQKT 315 (333)
T ss_pred eeecceecCCCCcCcccEEEEEEec
Confidence 6789999999885555556788876
No 21
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=32.49 E-value=27 Score=23.34 Aligned_cols=13 Identities=38% Similarity=0.555 Sum_probs=9.6
Q ss_pred eeccCCCCCCCCc
Q psy10372 7 IAFNEPGSSLASR 19 (63)
Q Consensus 7 iafNePg~~~~~~ 19 (63)
++||||.-...+.
T Consensus 70 l~fNEPD~~~qsn 82 (239)
T PF11790_consen 70 LGFNEPDLPGQSN 82 (239)
T ss_pred eeecCCCCCCCCC
Confidence 6899999665444
No 22
>COG5082 AIR1 Arginine methyltransferase-interacting protein, contains RING Zn-finger [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=31.21 E-value=22 Score=24.00 Aligned_cols=11 Identities=36% Similarity=0.818 Sum_probs=8.0
Q ss_pred CcCceeeccCC
Q psy10372 2 GPDGHIAFNEP 12 (63)
Q Consensus 2 G~nGHiafNeP 12 (63)
|.+||+.++-|
T Consensus 67 g~~GH~~~DCP 77 (190)
T COG5082 67 GQNGHLRRDCP 77 (190)
T ss_pred cccCcccccCC
Confidence 56777777777
No 23
>PF00659 POLO_box: POLO box duplicated region; InterPro: IPR000959 A subgroup of serine/threonine protein kinases, Polo or Polo-like kinases play multiple roles during the cell cycle. Polo kinases are required at several key points through mitosis, starting from control of the G2/M transition through phosphorylation of Cdc25C and mitotic cyclins. Polo kinases are characterised by an amino terminal catalytic domain, and a carboxy terminal non-catalytic domain consisting of three blocks of conserved sequences known as polo boxes which form one single functional domain []. The domain is named after its founding member encoded by the polo gene of Drosophila melanogaster []. This domain of around 70 amino acids has been found in species ranging from yeast to mammals. Polo boxes appear to mediate interaction with multiple proteins through protein:protein interactions; some but not all of these proteins are substrates for the kinase domain of the molecule []. The crystal structure of the polo domain of the murine protein, Sak, is dimeric, consisting of two alpha-helices and two six-stranded beta-sheets []. The topology of one polypeptide subunit of the dimer consists of, from its N- to C terminus, an extended strand segment, five beta-strands, one alpha-helix (A) and a C-terminal beta-strand. Beta-strands from one subunit form a contiguous antiparallel beta-sheet with beta-strands from the second subunit. The two beta-sheets pack with a crossing angle of 110 degrees, orienting the hydrophobic surfaces inward and the hydrophilic surfaces outward. Helix A, which is colinear with beta-strand 6 of the same polypeptide, buries a large portion of the non-overlapping hydrophobic beta-sheet surfaces. Interactions involving helices A comprise a majority of the hydrophobic core structure and also the dimer interface. Point mutations in the Polo box of the budding yeast Cdc5 protein abolish the ability of overexpressed Cdc5 to interact with the spindle poles and to organise cytokinetic structures [].; GO: 0005515 protein binding; PDB: 1MBY_B 3P37_A 3MHN_A 1Q4K_A 3HIK_A 3Q1I_A 3P35_A 3MHQ_A 1UMW_B 3MQ8_B ....
Probab=29.06 E-value=39 Score=18.14 Aligned_cols=18 Identities=17% Similarity=0.397 Sum_probs=11.5
Q ss_pred cCceeeccCCCCCCCCceEEEeC
Q psy10372 3 PDGHIAFNEPGSSLASRTRLKTL 25 (63)
Q Consensus 3 ~nGHiafNePg~~~~~~t~~v~l 25 (63)
.||.+++| |++.|++|..
T Consensus 12 Sng~vqv~-----FnD~tkivl~ 29 (68)
T PF00659_consen 12 SNGTVQVN-----FNDHTKIVLS 29 (68)
T ss_dssp TTSEEEEE-----ETTS-EEEEE
T ss_pred eCCCEEEE-----EeCCCEEEEC
Confidence 37777777 6667776664
No 24
>PHA02256 hypothetical protein
Probab=28.53 E-value=23 Score=21.80 Aligned_cols=7 Identities=57% Similarity=1.004 Sum_probs=5.5
Q ss_pred eeccCCC
Q psy10372 7 IAFNEPG 13 (63)
Q Consensus 7 iafNePg 13 (63)
+|||||-
T Consensus 75 ~gfndp~ 81 (113)
T PHA02256 75 IGFNDPI 81 (113)
T ss_pred cCCCCCE
Confidence 6899984
No 25
>cd06381 PBP1_iGluR_delta_like N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of an orphan family of delta receptors, GluRdelta1 and GluRdelta2. This CD represents the N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of an orphan family of delta receptors, GluRdelta1 and GluRdelta2. While this N-terminal domain belongs to the periplasmic-binding fold type I superfamily, the glutamate-binding domain of the iGluR is structurally homologous to the periplasmic-binding fold type II. The LIVBP-like domain of iGluRs is thought to play a role in the initial assembly of iGluR subunits, but it is not well understood how this domain is arranged and functions in intact iGluR. Although the delta receptors are a member of the ionotropic glutamate receptor family, they cannot be activated by AMPA, kainate, NMDA, glutamate, or any other ligands. Phylogenetic analysis shows that both GluRdelta1 and GluRalpha2 are more homologous to non-NMDA receptors. G
Probab=27.64 E-value=60 Score=22.89 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=20.0
Q ss_pred CcCceeeccCCCCCCCCceEEEeCCH
Q psy10372 2 GPDGHIAFNEPGSSLASRTRLKTLAQ 27 (63)
Q Consensus 2 G~nGHiafNePg~~~~~~t~~v~l~~ 27 (63)
|-.|+|-||+=|-.-+-.-+++.|..
T Consensus 317 GLTG~i~F~~~g~r~~~~l~i~~~~~ 342 (363)
T cd06381 317 GLTGKLEFNEGGDNSNVQFEILGTGY 342 (363)
T ss_pred CcceeEEeCCCCCccccEEEEEEecc
Confidence 67899999997755566668888863
No 26
>cd06383 PBP1_iGluR_AMPA_Like N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of uncharacterized AMPA-like receptors. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of uncharacterized AMPA-like receptors. While this N-terminal domain belongs to the periplasmic-binding fold type I superfamily, the glutamate-binding domain of the iGluR is structurally homologous to the periplasmic-binding fold type II. The LIVBP-like domain of iGluRs is thought to play a role in the initial assembly of iGluR subunits, but it is not well understood how this domain is arranged and functions in intact iGluR. AMPA receptors consist of four types of subunits (GluR1, GluR2, GluR3, and GluR4) which combine to form a tetramer and play an important roles in mediating the rapid excitatory synaptic current.
Probab=26.17 E-value=32 Score=24.31 Aligned_cols=20 Identities=20% Similarity=0.194 Sum_probs=13.3
Q ss_pred CcCceeeccCCC--CCCCCceE
Q psy10372 2 GPDGHIAFNEPG--SSLASRTR 21 (63)
Q Consensus 2 G~nGHiafNePg--~~~~~~t~ 21 (63)
|-.|||.|||.| +.|...++
T Consensus 337 gltG~i~f~~~g~R~~~~l~~~ 358 (368)
T cd06383 337 MLAGRVAIDEGSSVSTKTIGSW 358 (368)
T ss_pred eecCeEEEecCceeeeeeeeeE
Confidence 567999999877 44444333
No 27
>cd06367 PBP1_iGluR_NMDA N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the ionotropic N-methyl-d-asparate (NMDA) subtype of glutamate receptors. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the ionotropic N-methyl-d-asparate (NMDA) subtype of glutamate receptors. While this N-terminal domain belongs to the periplasmic-binding fold type I superfamily, the glutamate-binding domain of the iGluR is structurally homologous to the periplasmic-binding fold type II. The LIVBP-like domain of iGluRs is thought to play a role in the initial assembly of iGluR subunits, but it is not well understood how this domain is arranged and functions in intact iGluR. The function of the NMDA subtype receptor serves critical functions in neuronal development, functioning, and degeneration in the mammalian central nervous system. The functional NMDA receptor is a heterotetramer comprising two NR1 and two NR2 (A, B, C, and D) or NR3 (A and B) subunits
Probab=26.11 E-value=68 Score=21.85 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=19.6
Q ss_pred CcCceeeccCCCCCCCCceEEEeCC
Q psy10372 2 GPDGHIAFNEPGSSLASRTRLKTLA 26 (63)
Q Consensus 2 G~nGHiafNePg~~~~~~t~~v~l~ 26 (63)
|..|++.||+-|..-+..-.++.|.
T Consensus 314 G~tg~v~F~~~G~~~~~~~~I~~l~ 338 (362)
T cd06367 314 GETGDVSFNEDGYLSNPKLVIINLR 338 (362)
T ss_pred CCCCceeECCCcccccceEEEEEec
Confidence 7789999999776655667788875
No 28
>KOG4637|consensus
Probab=25.17 E-value=28 Score=26.21 Aligned_cols=12 Identities=33% Similarity=0.725 Sum_probs=9.9
Q ss_pred cCceeeccCCCC
Q psy10372 3 PDGHIAFNEPGS 14 (63)
Q Consensus 3 ~nGHiafNePg~ 14 (63)
.||+.|||||-+
T Consensus 77 ~DgKyGF~d~lt 88 (464)
T KOG4637|consen 77 RDGKYGFSDPLT 88 (464)
T ss_pred ecCccCCCCchh
Confidence 589999999763
No 29
>cd00498 Hsp33 Heat shock protein 33 (Hsp33): Cytosolic protein that acts as a molecular chaperone under oxidative conditions. In normal (reducing) cytosolic conditions, four conserved Cys residues are coordinated by a Zn ion. Under oxidative stress (such as heat shock), the Cys are reversibly oxidized to disulfide bonds, which causes the chaperone activity to be turned on. Hsp33 is homodimeric in its functional form.
Probab=24.42 E-value=96 Score=21.37 Aligned_cols=50 Identities=20% Similarity=0.404 Sum_probs=33.1
Q ss_pred CCcCceeecc-CCCCCCCCceEEEeCCHHHHHHH-hhccCCCcCCCCCeeEEeCHH
Q psy10372 1 IGPDGHIAFN-EPGSSLASRTRLKTLAQETLEAN-ARFFDNDIKKVPKEALTVGVG 54 (63)
Q Consensus 1 iG~nGHiafN-ePg~~~~~~t~~v~l~~~t~~~~-~~~f~~~~~~vP~~aiTmGi~ 54 (63)
|| +|++... +|+. -+...=+|.|...++... +.||.. -|.+|. +|.+|..
T Consensus 107 vG-~G~L~Vt~d~~~-~~pY~g~V~l~~g~iaedl~~Yf~q-SEQipt-~v~l~v~ 158 (275)
T cd00498 107 VG-NGYLAVTKDLGL-GEPYQGVVPLVSGEIAEDLEYYFAQ-SEQLPS-AVGLGVL 158 (275)
T ss_pred cC-CeEEEEEEeCCC-CCCEEEEEEcCCCcHHHHHHHHHHh-ccccce-EEEEEEe
Confidence 46 7888744 4543 246677889988887654 678863 377877 5767654
No 30
>PF10907 DUF2749: Protein of unknown function (DUF2749); InterPro: IPR024475 This bacterial family of proteins represent the TrbJ and TrbK genes of the Ti plasmid conjugative transfer operon [].
Probab=22.12 E-value=82 Score=17.90 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=12.5
Q ss_pred CCHHHHHHHhhccCCCcC
Q psy10372 25 LAQETLEANARFFDNDIK 42 (63)
Q Consensus 25 l~~~t~~~~~~~f~~~~~ 42 (63)
++++.|...++||+++.+
T Consensus 35 s~eeQr~~re~ff~~~~~ 52 (66)
T PF10907_consen 35 SSEEQRAHREKFFGGDKD 52 (66)
T ss_pred ChHHHHHHHHHHcCCCCC
Confidence 466677777899986433
No 31
>TIGR03769 P_ac_wall_RPT actinobacterial surface-anchored protein domain. This model describes a repeat domain that one to three times in Actinobacterial proteins, some of which have LPXTG-type sortase recognition motifs for covalent attachment to the Gram-positive cell wall. Where it occurs with duplication in an LPXTG-anchored protein, it tends to be adjacent to the substrate-binding protein of the gene trio of an ABC transporter system, where that substrate-binding protein has a single copy of this same domain. This arrangement suggests a substrate-binding relay system, with the LPXTG protein acting as a substrate receptor.
Probab=21.57 E-value=43 Score=16.93 Aligned_cols=11 Identities=27% Similarity=0.682 Sum_probs=8.4
Q ss_pred ceeeccCCCCC
Q psy10372 5 GHIAFNEPGSS 15 (63)
Q Consensus 5 GHiafNePg~~ 15 (63)
.+++|.+||..
T Consensus 5 ~nW~FT~PG~Y 15 (41)
T TIGR03769 5 ANWVFTKPGTY 15 (41)
T ss_pred cceeeCCCeEE
Confidence 46899999943
No 32
>KOG3041|consensus
Probab=21.20 E-value=75 Score=21.99 Aligned_cols=11 Identities=27% Similarity=0.637 Sum_probs=7.8
Q ss_pred eeccCCC-CCCC
Q psy10372 7 IAFNEPG-SSLA 17 (63)
Q Consensus 7 iafNePg-~~~~ 17 (63)
.+||+|| ++-+
T Consensus 142 ~~f~DPGltn~~ 153 (225)
T KOG3041|consen 142 TVFLDPGLTNCN 153 (225)
T ss_pred cEEcCCCCCCCc
Confidence 5899999 4433
Done!