Query psy10372
Match_columns 63
No_of_seqs 107 out of 809
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 16:12:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hn6_A Glucosamine-6-phosphate 99.9 9.8E-22 3.4E-26 134.6 7.0 63 1-63 159-221 (289)
2 1ne7_A Glucosamine-6-phosphate 99.6 2.2E-16 7.4E-21 107.1 6.3 63 1-63 138-200 (289)
3 3lwd_A 6-phosphogluconolactona 99.6 4.2E-17 1.4E-21 108.3 1.3 54 1-63 133-186 (226)
4 3e15_A Glucose-6-phosphate 1-d 99.6 2.5E-17 8.5E-22 114.4 -2.9 61 1-63 166-248 (312)
5 3lhi_A Putative 6-phosphogluco 99.6 1.8E-16 6E-21 105.2 0.7 55 1-63 135-190 (232)
6 1fs5_A Glucosamine-6-phosphate 99.6 3.5E-15 1.2E-19 99.3 6.2 63 1-63 138-200 (266)
7 3nwp_A 6-phosphogluconolactona 99.6 3.4E-16 1.2E-20 104.1 0.9 54 1-63 137-190 (233)
8 2ri0_A Glucosamine-6-phosphate 99.6 4.6E-15 1.6E-19 96.9 6.1 62 1-63 126-187 (234)
9 2bkx_A Glucosamine-6-phosphate 99.6 6.4E-15 2.2E-19 96.5 6.3 62 1-63 133-194 (242)
10 3eb9_A 6-phosphogluconolactona 99.5 3.1E-15 1.1E-19 101.0 3.0 53 1-63 160-215 (266)
11 3tx2_A Probable 6-phosphogluco 99.5 5.2E-15 1.8E-19 99.2 1.4 50 1-63 152-203 (251)
12 3oc6_A 6-phosphogluconolactona 99.5 5.9E-15 2E-19 98.8 1.1 50 1-63 150-201 (248)
13 3ico_A 6PGL, 6-phosphogluconol 99.4 1.8E-14 6.2E-19 97.6 1.4 50 1-63 168-219 (268)
14 1vl1_A 6PGL, 6-phosphogluconol 99.4 4.7E-14 1.6E-18 93.7 1.9 48 1-63 145-194 (232)
15 3css_A 6-phosphogluconolactona 99.4 1.5E-13 5E-18 92.5 2.5 53 1-63 163-216 (267)
16 1y89_A DEVB protein; structura 99.3 3E-13 1E-17 89.4 2.4 50 1-63 139-188 (238)
17 2r5f_A Transcriptional regulat 99.1 4E-12 1.4E-16 85.2 -0.9 60 1-63 160-228 (264)
18 2w48_A Sorbitol operon regulat 98.8 1.6E-11 5.4E-16 83.4 -7.5 62 2-63 211-279 (315)
19 2okg_A Central glycolytic gene 98.8 1.6E-11 5.5E-16 82.0 -8.3 59 1-63 156-217 (255)
20 2o0m_A Transcriptional regulat 98.5 1.7E-10 5.8E-15 79.3 -8.7 59 1-63 243-304 (345)
21 2gnp_A Transcriptional regulat 98.4 5.4E-09 1.8E-13 70.0 -4.4 59 1-63 158-225 (266)
22 3nze_A Putative transcriptiona 95.8 0.0015 5.3E-08 43.5 -0.0 31 33-63 193-227 (267)
23 3kv1_A Transcriptional repress 91.1 0.05 1.7E-06 36.1 0.5 29 35-63 193-225 (267)
24 3efb_A Probable SOR-operon reg 90.5 0.076 2.6E-06 35.1 0.9 30 34-63 197-230 (266)
25 1dsq_A Nucleic acid binding pr 40.3 9.4 0.00032 16.6 0.7 13 2-14 9-21 (26)
26 2a51_A Nucleocapsid protein; s 30.7 15 0.00051 17.2 0.6 12 2-13 7-18 (39)
27 2bl6_A Nucleocapsid protein P1 26.7 21 0.00071 16.4 0.7 12 2-13 7-18 (37)
28 1nc8_A Nucleocapsid protein; H 26.2 24 0.00082 15.5 0.8 12 2-13 13-24 (29)
29 2ovm_B NCOR, progesterone rece 22.8 38 0.0013 15.1 1.1 15 44-58 4-18 (26)
30 1a6b_B Momulv, zinc finger pro 21.8 47 0.0016 16.0 1.5 15 2-16 17-31 (40)
No 1
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=99.85 E-value=9.8e-22 Score=134.62 Aligned_cols=63 Identities=75% Similarity=1.180 Sum_probs=59.6
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||++|++.+|+|.|++.|+++|+++|+++.+.+|+++||||+++||+||+|+
T Consensus 159 mG~DGH~asnfPg~~l~~~t~~v~l~~~t~~~n~~~f~~~~~~~P~~rITl~l~~I~~Ar~i~ 221 (289)
T 3hn6_A 159 IGPDGHIAFNEPGSSLTSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVL 221 (289)
T ss_dssp CCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEE
T ss_pred cCCCCceeecCCCCcccccceEEeccHHHHHHhhhhccCCCCCCCCeEEECCHHHHHccCeEE
Confidence 799999999999999999999999999999999999975678899999999999999999985
No 2
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=99.64 E-value=2.2e-16 Score=107.05 Aligned_cols=63 Identities=76% Similarity=1.129 Sum_probs=57.9
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|+.++++.++++.|++.++..+.++|+.+.+.+|+++||||+++|++||+|+
T Consensus 138 iG~dGH~aslfPg~~l~~~~~~~~L~~~~~~~~~~~f~~~~~~vp~~~iTl~l~~l~~a~~vi 200 (289)
T 1ne7_A 138 IGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVM 200 (289)
T ss_dssp CCTTCCSTTCCTTCCTTCCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEE
T ss_pred cCCCCcceecCCCCCCccccceEEcchhhhhhhhccccCCCCCCCCEEEECCHHHHhcCCEEE
Confidence 799999999999999999999999999998888999965567799999999999999999985
No 3
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=99.63 E-value=4.2e-17 Score=108.25 Aligned_cols=54 Identities=28% Similarity=0.345 Sum_probs=44.8
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||++ .|++.| +.+.++|..+.+.+|+++||||+++||+||+|+
T Consensus 133 ~G~dGH~as~fPg~~--------~L~~~~-~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ 186 (226)
T 3lwd_A 133 MGGDGHTASLFPDSE--------QLATAL-ETTSAAVVVHAPSVPQARITLSASRLADAGLHV 186 (226)
T ss_dssp CCTTSCBTTBCTTCT--------THHHHH-HCCSSEEEECCTTSSSCEEEECHHHHTCBSCEE
T ss_pred cCCCCCeeecCCCCh--------hhhhhh-ccCCeEEecCCCCCCCcEEEcCHHHHHhhCeEE
Confidence 799999999999976 466666 445667753467899999999999999999985
No 4
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=99.59 E-value=2.5e-17 Score=114.40 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=47.2
Q ss_pred CCcCceeeccCCCCCCCC------ceEEEeCCHHHHH-H---------------HhhccCCCcCCCCCeeEEeCHHHHhc
Q psy10372 1 IGPDGHIAFNEPGSSLAS------RTRLKTLAQETLE-A---------------NARFFDNDIKKVPKEALTVGVGTVMD 58 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~------~t~~v~l~~~t~~-~---------------~~~~f~~~~~~vP~~aiTmGi~tIm~ 58 (63)
||.|||+|||+||++|++ +||++ ++.|++ + +.++|.++.+.+|+++||||+++||+
T Consensus 166 iG~DGHiaslfPg~~~~~~~~~~~~t~~l--~e~t~~~~~~~~s~~~~~~~~~~~~~~f~~~~~~pP~~rITlt~~~I~~ 243 (312)
T 3e15_A 166 MGSDFHIASLFPNIFFNIYMNNYQNSYIY--DESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGN 243 (312)
T ss_dssp CCTTSCBTTBCSSHHHHHHHHHTGGGSSS--CGGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHT
T ss_pred cCCCCceeecCCCCcccccccccccceee--cHHHHHHhhcccccccccccccccceeeccCCCCCCCeEEEecHHHHhc
Confidence 799999999999988755 78774 466653 1 13577644444569999999999999
Q ss_pred ccccC
Q psy10372 59 AQERL 63 (63)
Q Consensus 59 Ak~ii 63 (63)
||+|+
T Consensus 244 Ak~v~ 248 (312)
T 3e15_A 244 ASSKI 248 (312)
T ss_dssp CSEEE
T ss_pred CCeEE
Confidence 99985
No 5
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=99.58 E-value=1.8e-16 Score=105.25 Aligned_cols=55 Identities=15% Similarity=0.253 Sum_probs=41.3
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHh-hccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANA-RFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~-~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||+++ |++.++..+. ++|..+.+.+|+++||||+++||+||+|+
T Consensus 135 ~G~dGH~as~fPg~~~--------l~~~~~~~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ 190 (232)
T 3lhi_A 135 MGNDGHTASIFPKAPQ--------FQTAIDGSAGVALVHTTPVTAPHERISMTLDAIAHTGHVF 190 (232)
T ss_dssp CCTTSCBTTBCTTCTT--------HHHHHCCTTCCCEEEECCSSSSSCEEEECHHHHHTCSEEE
T ss_pred cCCCCCeeecCCCChh--------hhhhhccccCcEEEeCCCCCCCCceEEecHHHHHhcCeEE
Confidence 7999999999999764 3333222232 45642457799999999999999999985
No 6
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=99.57 E-value=3.5e-15 Score=99.34 Aligned_cols=63 Identities=70% Similarity=1.060 Sum_probs=57.5
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|+.++.+.++++.|.+.++..++++|+.+.+.+|+.+||||+++|++||+|+
T Consensus 138 iG~dGh~asl~pg~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~p~~~itl~l~~l~~a~~vi 200 (266)
T 1fs5_A 138 VGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVM 200 (266)
T ss_dssp CCTTCCSTTCCSSCCTTCCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEE
T ss_pred cCCCCCeeecCCCCCCCccccEEEechhhhhhhhccccCCcCCCCcEEEECChHHHhcCCEEE
Confidence 799999999999988999999999999998888899965557789999999999999999975
No 7
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=99.56 E-value=3.4e-16 Score=104.14 Aligned_cols=54 Identities=17% Similarity=0.287 Sum_probs=40.5
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||++ .|++.++... ++|..+.+.+|.++||||+++||+||+|+
T Consensus 137 ~G~dGHias~fPg~~--------~L~~~~~~~~-~~~~~~~~~~P~~riTlt~~~I~~A~~i~ 190 (233)
T 3nwp_A 137 MGNDGHTCSWFPCSA--------ELENALTTQA-LCVATNPTTAPHGRITLSKSAILNSRQIY 190 (233)
T ss_dssp CCTTSCBTTBCTTCT--------THHHHHHCCS-SEEEECCSSSSSCEEEECHHHHHSBSCEE
T ss_pred cCCCCCeeecCCCCc--------hhhhhcccCc-eEEECCCCCCCCceEECCHHHHHhhCeEE
Confidence 799999999999976 3333332222 45532346799999999999999999985
No 8
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=99.56 E-value=4.6e-15 Score=96.91 Aligned_cols=62 Identities=44% Similarity=0.820 Sum_probs=56.3
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|+.++.+.++++.|++.+...+.++|+. .+.+|.+.||||+.+|++||++|
T Consensus 126 iG~dgh~a~l~p~~~~~~~~~~~~l~~~~~~~~~~~fd~-~~~~~~~~itl~l~~l~~a~~vi 187 (234)
T 2ri0_A 126 IGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANSRFFEK-AEDVPKQAISMGLASIMSAKMIL 187 (234)
T ss_dssp CCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHHTTCSC-GGGSCCEEEECCHHHHHTSSEEE
T ss_pred cCCCCCchhcCCCCCCCCCceEEECCHHHHHHhhhhcCC-ccCCCCceEEeCHHHHhhcCEEE
Confidence 799999999999998999999999999988888999973 45589999999999999999975
No 9
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=99.55 E-value=6.4e-15 Score=96.48 Aligned_cols=62 Identities=52% Similarity=0.873 Sum_probs=56.5
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|+.++.+.++++.|++.++..+.++|+ +.+.+|.+.||||+.+|++||+++
T Consensus 133 iG~dgh~a~l~p~~~~~~~~~~~~L~~~~~~~~~~~~~-~~~~~p~~~itltl~~l~~a~~vi 194 (242)
T 2bkx_A 133 IGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFP-SIDSVPKKALTMGIQTILSSKRIL 194 (242)
T ss_dssp CCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHGGGSS-SGGGSCSEEEECCHHHHHTSSCEE
T ss_pred cCCCCcceeCCCCCccccCceEEeCCHHHHHHHhhhcC-CCCCCCCccEEcCHHHHhhcCEEE
Confidence 79999999999999999999999999999887888997 356789999999999999999975
No 10
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=99.53 E-value=3.1e-15 Score=100.96 Aligned_cols=53 Identities=26% Similarity=0.379 Sum_probs=42.5
Q ss_pred CCcCceeeccCCCCCC-CCc--eEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSL-ASR--TRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~-~~~--t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||+++ ... +|+|.++ +....+.+|+++||||+++||+||+|+
T Consensus 160 mG~DGH~as~fPg~~~l~~~~~~~~v~~~----------~~~~~~~~P~~rITlt~~~I~~A~~i~ 215 (266)
T 3eb9_A 160 LGSDGHTASIFPGSQAEKETDGKVVVSVG----------FPSETMKPKVWRVTLSPATIMQARNVI 215 (266)
T ss_dssp CCTTSCBTTBCTTCSGGGCCSSSCSEEEE----------CCCTTCSSCSCEEEECHHHHHTCSEEE
T ss_pred cCCCCCeeecCCCCcccccCCCccEEEec----------CCCcccCCCCeEEEcCHHHHHhcCeEE
Confidence 7999999999999775 555 7877762 321123799999999999999999985
No 11
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=99.48 E-value=5.2e-15 Score=99.19 Aligned_cols=50 Identities=22% Similarity=0.344 Sum_probs=40.4
Q ss_pred CCcCceeeccCCCCCCCCce--EEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t--~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|++++.+.+ +++.++ . ...+|+++||||+++||+||+|+
T Consensus 152 ~G~DGH~as~fPg~~~~~~~~~~vv~~~-----------~--~~~~P~~riTlt~~~I~~Ar~i~ 203 (251)
T 3tx2_A 152 MGGEGHINSLFPHTDAVKETQRLVVAVP-----------D--SPKPPPQRITLTLPAIQRSREVW 203 (251)
T ss_dssp CCTTCCBTTBCTTCHHHHCSSCSEEEES-----------C--CSSSSSCEEEECHHHHTTSSEEE
T ss_pred CCCCCceEEcCCcChhhccCcceEEEec-----------C--CCCCCCcEEEECHHHHHhcCeEE
Confidence 79999999999998775554 455542 2 25689999999999999999985
No 12
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=99.47 E-value=5.9e-15 Score=98.79 Aligned_cols=50 Identities=22% Similarity=0.324 Sum_probs=40.5
Q ss_pred CCcCceeeccCCCCCCCCce--EEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t--~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||+++.+.+ +++.+ +. ...+|+++||||+++||+||+|+
T Consensus 150 ~G~dGH~aslfPg~~~~~~~~~~vv~~-----------~~--~~~~P~~riTlt~~~I~~Ar~i~ 201 (248)
T 3oc6_A 150 MGGEGHVNSLFPDTDAVRETERLVVGV-----------SD--SPKPPPRRITLTLPAVQNSREVW 201 (248)
T ss_dssp CCTTCCBTTBCTTCHHHHCSSCSEEEE-----------SC--CSSSSSCEEEECHHHHTTEEEEE
T ss_pred CCCCCCEEEcCCCChhhccCcceEEEe-----------cC--CCCCCCcEEEcCHHHHHhhCeEE
Confidence 79999999999998776555 45554 22 25689999999999999999985
No 13
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=99.44 E-value=1.8e-14 Score=97.59 Aligned_cols=50 Identities=24% Similarity=0.361 Sum_probs=40.1
Q ss_pred CCcCceeeccCCCCCCCCceE--EEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTR--LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~--~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+||+++.+.|+ ++.+ ++ .+.+|.++||||+++||+||+|+
T Consensus 168 mG~DGH~as~fPg~~~~~~t~~~vv~~-----------~~--~~~~P~~rITlt~~~I~~Ar~i~ 219 (268)
T 3ico_A 168 MGPEGHINSLFPHSPAVLESTRMVVAV-----------DD--SPKPPPRRITLTLPAIQRSREVW 219 (268)
T ss_dssp CCTTCCBTTBCTTCHHHHCSSCSEEEE-----------SC--CSSSSSCEEEECHHHHTTSSEEE
T ss_pred cCCcccccccCCCChhhhhhceEEEEe-----------cC--CCCCCCceEEEechhhhccceEE
Confidence 799999999999987765552 4443 22 25689999999999999999985
No 14
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=99.41 E-value=4.7e-14 Score=93.73 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=41.6
Q ss_pred CCcCceeeccCC-CCCC-CCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEP-GSSL-ASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNeP-g~~~-~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+| ++++ ++.+|+|. . .+.+|.++||||+++||+||+|+
T Consensus 145 iG~dGH~aslfP~g~~~l~~~~~~v~-------------~--~~~~p~~rITltl~~I~~A~~ii 194 (232)
T 1vl1_A 145 MGPDGHVASIFDLETGNKDNLVTFTD-------------P--SGDPKVPRVTLTFRALNTSLYVL 194 (232)
T ss_dssp CCTTSCBTTBCSHHHHTCSSSEEECS-------------S--BTTTTBCEEEECHHHHTTCSEEE
T ss_pred cCCCCchhhccCCCCcccccCCcEEe-------------c--CCCCCCCEEECCHHHHHhCCEEE
Confidence 799999999999 9774 88888875 1 25689999999999999999985
No 15
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=99.37 E-value=1.5e-13 Score=92.50 Aligned_cols=53 Identities=19% Similarity=0.189 Sum_probs=42.3
Q ss_pred CCcCceeeccCCCCC-CCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~-~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|+++ ++..+|+|.+ .+|. +.+.+|.++||||+++|++||+|+
T Consensus 163 iG~dGH~aslfP~~~~L~~~~~~v~~---------~~~~-~~~~~p~~rITltl~~I~~A~~v~ 216 (267)
T 3css_A 163 FGSDGHTASIFPDSVAATDEEHVVSV---------SFPS-PTMSPKVWRVTLSKTVIQYAKHVV 216 (267)
T ss_dssp CCTTSCBTTBCTTSGGGGCCSCSEEE---------ECCC-TTCSSCSCEEEECHHHHHHCSEEE
T ss_pred CCCCccceeCCCCCcccCCCCcEEEe---------eccc-CCCCCCCceEECCHHHHHcCCEEE
Confidence 799999999999987 4666766543 2422 236689999999999999999985
No 16
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=99.34 E-value=3e-13 Score=89.39 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=41.8
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHHHHhhccCCCcCCCCCeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~~~~~~f~~~~~~vP~~aiTmGi~tIm~Ak~ii 63 (63)
||.|||+|||+|++ +++.+|+|.. +++ .+.+|.++||||+++|++||+|+
T Consensus 139 iG~dGH~aslfP~~-l~~~~~~v~~----------~~~--~~~~p~~rITltl~~i~~a~~vi 188 (238)
T 1y89_A 139 VGADGHTASLFPGQ-TDYADANLSV----------VAS--HPESGQLRVSKTAKVLQAAKRIS 188 (238)
T ss_dssp CCTTSCBTTBCTTT-CCTTCCSSEE----------EEE--CTTTCCEEEEECHHHHHHSSEEE
T ss_pred CCCCCceeecCCCC-CCCCCcEEEe----------ccC--CCCCCCCeEECCHHHHHhCCEEE
Confidence 79999999999999 8888776662 333 24589999999999999999985
No 17
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.12 E-value=4e-12 Score=85.23 Aligned_cols=60 Identities=25% Similarity=0.342 Sum_probs=32.9
Q ss_pred CCcC---ceeeccCCCCCCCCceEEEeCCHHHHH--HHhhccCCCcCCCC----CeeEEeCHHHHhcccccC
Q psy10372 1 IGPD---GHIAFNEPGSSLASRTRLKTLAQETLE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~n---GHiafNePg~~~~~~t~~v~l~~~t~~--~~~~~f~~~~~~vP----~~aiTmGi~tIm~Ak~ii 63 (63)
||.+ ||+ || ||+ +.+.++++.|.+.+.. .+.+||+.+.+.|| .++||||+++||++|++|
T Consensus 160 IG~~~~~~~i-~~-~g~-~~~~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~~~~vI 228 (264)
T 2r5f_A 160 IGELEPSQLL-RN-SGN-YYTEDMLRVLAERGAVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVL 228 (264)
T ss_dssp CEECC----------------------CTTTTCCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEE
T ss_pred cCCCCCCccH-hh-cCC-CCCHHHHHHHHHCCcEEEeEhhhhccCCCCCCCccccceecCCHHHHcCCCCEE
Confidence 6766 999 98 887 9999999999998743 68899975557799 899999999999999875
No 18
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=98.80 E-value=1.6e-11 Score=83.39 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=49.0
Q ss_pred CcCceeeccCC-CCCCCCceEEEeCCHHHHH--HHhhccCCCcCCCC----CeeEEeCHHHHhcccccC
Q psy10372 2 GPDGHIAFNEP-GSSLASRTRLKTLAQETLE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 2 G~nGHiafNeP-g~~~~~~t~~v~l~~~t~~--~~~~~f~~~~~~vP----~~aiTmGi~tIm~Ak~ii 63 (63)
|-.||++||.| ++++.+.++++.|.+.+.. .+.+||+.+.+.|| .++||||+++||++|++|
T Consensus 211 GIGg~~~~~g~~~~~~~~~~~~~~L~~~~avg~~~~rffd~~g~~v~~~~~~~~i~~~l~~i~~~~~ii 279 (315)
T 2w48_A 211 GIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSI 279 (315)
T ss_dssp CCBCTTCCSSSCHHHHHCTHHHHHHHHTTEEEEETTEEEETTSCBCCCSSGGGBCBCCHHHHHTSSEEE
T ss_pred ccCcchhhcCccccccCCHHHHHHHHHCCcEEEEECceECCCCCEeCCccccceecCCHHHHhCCCCEE
Confidence 44499999975 2346777888888877633 67889965557799 899999999999999875
No 19
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=98.77 E-value=1.6e-11 Score=81.96 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=49.9
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHHH--HHhhccCCCcCCCC-CeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETLE--ANARFFDNDIKKVP-KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~~--~~~~~f~~~~~~vP-~~aiTmGi~tIm~Ak~ii 63 (63)
||.+||++ ||+ +.+.++++.|.+.+.. .+.+||+.+.+.|| .++||||+++||++|++|
T Consensus 156 IG~~~~i~--~~g--~~~~~~~~~L~~~~avg~~~~rffd~~G~~V~~~~~igi~l~~i~~~~~vI 217 (255)
T 2okg_A 156 IGEAKTMA--QRR--NTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDII 217 (255)
T ss_dssp CEEHHHHH--HHT--TCCHHHHHHHHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEE
T ss_pred cCCchhhh--hcC--CCCHHHHHHHHHCCeEEEeehhhhccCCCCccCCceecCCHHHHhCCCCEE
Confidence 79999996 888 6788999999887743 68899964456789 899999999999999875
No 20
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=98.54 E-value=1.7e-10 Score=79.34 Aligned_cols=59 Identities=22% Similarity=0.232 Sum_probs=49.8
Q ss_pred CCcCceeeccCCCCCCCCceEEEeCCHHHH--HHHhhccCCCcCCCC-CeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGHIAFNEPGSSLASRTRLKTLAQETL--EANARFFDNDIKKVP-KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGHiafNePg~~~~~~t~~v~l~~~t~--~~~~~~f~~~~~~vP-~~aiTmGi~tIm~Ak~ii 63 (63)
||.+||++ ||| +.+.++++.|.+.+. ..+.+||+.+.+.|| .++||||+++||++|++|
T Consensus 243 IG~~~~i~--~~g--~~~~~~~~~L~~~~avg~~~~~ffd~~g~~v~~~~~i~i~l~~l~~~~~vi 304 (345)
T 2o0m_A 243 IGRALHMA--ARR--KMSDDEMVMLKQKNAVAESFGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVV 304 (345)
T ss_dssp CEEHHHHH--HHT--TCCHHHHHHHHHTTCCEEETTEEECTTSCEEEECCCSBCCGGGGGGCSEEE
T ss_pred cCCchhhh--hcC--CCCHHHHHHHHHCCeEEEeeccccccCCCCcCCCceecCCHHHHcCCCCEE
Confidence 78899997 888 788899999988764 567899975556788 789999999999999875
No 21
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=98.37 E-value=5.4e-09 Score=70.04 Aligned_cols=59 Identities=19% Similarity=0.315 Sum_probs=46.0
Q ss_pred CCcCce---eeccCCCCCCCCceEEEeCCHHHHH--HHhhccCCCcCCCC----CeeEEeCHHHHhcccccC
Q psy10372 1 IGPDGH---IAFNEPGSSLASRTRLKTLAQETLE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 1 iG~nGH---iafNePg~~~~~~t~~v~l~~~t~~--~~~~~f~~~~~~vP----~~aiTmGi~tIm~Ak~ii 63 (63)
||.+|| +.+ |+ +.+.++++.|.+.+.. .+.+||+.+.+.|| .++||||+++||++|++|
T Consensus 158 IG~~~~~~~~~~--~g--~~s~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~i~~~~~vI 225 (266)
T 2gnp_A 158 IGDFSNKGKHQW--LD--MLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSL 225 (266)
T ss_dssp CEECSHHHHHTT--TT--TSCHHHHHHHHHTTCCEEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSSEEE
T ss_pred cCCCCCCCcchh--cC--CCCHHHHHHHHHCCeEEEEEchhhccCCCCCCCccccceecCCHHHHcCCCCEE
Confidence 577764 433 22 6788999999887643 67899975557799 899999999999999875
No 22
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=95.79 E-value=0.0015 Score=43.51 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=22.9
Q ss_pred HhhccCCCcCCCC----CeeEEeCHHHHhcccccC
Q psy10372 33 NARFFDNDIKKVP----KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 33 ~~~~f~~~~~~vP----~~aiTmGi~tIm~Ak~ii 63 (63)
+.+||+.+-+-|| .++|+|++.+|++++++|
T Consensus 193 ~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~vi 227 (267)
T 3nze_A 193 ATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRI 227 (267)
T ss_dssp TTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEE
T ss_pred ecccccCCCCCCCcchhcceecCChHHHccCCeEE
Confidence 3467864323344 789999999999999875
No 23
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=91.13 E-value=0.05 Score=36.10 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=22.2
Q ss_pred hccCCCcCCCC----CeeEEeCHHHHhcccccC
Q psy10372 35 RFFDNDIKKVP----KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 35 ~~f~~~~~~vP----~~aiTmGi~tIm~Ak~ii 63 (63)
+||+.+-+.|+ .++|+|++.+|++++++|
T Consensus 193 rffD~~G~~v~~~~~~~~i~~~l~~l~~~~~~i 225 (267)
T 3kv1_A 193 DFFKLDGTDADTLMRGRVIGLEMEDLRQIPNVV 225 (267)
T ss_dssp EEEETTSCBCCCGGGGGBCBCCHHHHHTSSEEE
T ss_pred HhhcCCCCEeccccccceeecCHHHHcCCCcEE
Confidence 57864334465 479999999999999864
No 24
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=90.47 E-value=0.076 Score=35.11 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=22.1
Q ss_pred hhccCCCcCCCC----CeeEEeCHHHHhcccccC
Q psy10372 34 ARFFDNDIKKVP----KEALTVGVGTVMDAQERL 63 (63)
Q Consensus 34 ~~~f~~~~~~vP----~~aiTmGi~tIm~Ak~ii 63 (63)
.+||+.+-+.|+ .++|+|++.+|++++++|
T Consensus 197 ~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~~i 230 (266)
T 3efb_A 197 SRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSI 230 (266)
T ss_dssp TEEECTTSCBCCCTTGGGBCBCCHHHHHTSSEEE
T ss_pred cccccCCCCCCCcchhcceecCCHHHHhCCCCEE
Confidence 467864333344 379999999999999875
No 25
>1dsq_A Nucleic acid binding protein P14; CCHC type zinc finger, virus/viral protein; NMR {Mouse mammary tumor virus} SCOP: g.40.1.1
Probab=40.27 E-value=9.4 Score=16.61 Aligned_cols=13 Identities=31% Similarity=0.437 Sum_probs=9.9
Q ss_pred CcCceeeccCCCC
Q psy10372 2 GPDGHIAFNEPGS 14 (63)
Q Consensus 2 G~nGHiafNePg~ 14 (63)
|..||++=+.|..
T Consensus 9 G~~GH~ardC~~~ 21 (26)
T 1dsq_A 9 GKTGHIKRDCKEE 21 (26)
T ss_dssp CCBSSCTTTTTCC
T ss_pred CCCCcccccCCCc
Confidence 6789998887653
No 26
>2a51_A Nucleocapsid protein; sivlhoest, structure, NCP8, viral protein, metal binding protein; NMR {Synthetic}
Probab=30.67 E-value=15 Score=17.18 Aligned_cols=12 Identities=33% Similarity=0.263 Sum_probs=9.9
Q ss_pred CcCceeeccCCC
Q psy10372 2 GPDGHIAFNEPG 13 (63)
Q Consensus 2 G~nGHiafNePg 13 (63)
|+.||++-+-|.
T Consensus 7 g~~GH~a~~C~~ 18 (39)
T 2a51_A 7 GKPGHTARMCRQ 18 (39)
T ss_dssp CCBSSCTTTCCS
T ss_pred CCCCcccccCCC
Confidence 678999998875
No 27
>2bl6_A Nucleocapsid protein P11; lentivirus, polyprotein, core protein, retrovirus zinc finger-like domains; NMR {Equine infectious anemia virus}
Probab=26.71 E-value=21 Score=16.44 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=9.4
Q ss_pred CcCceeeccCCC
Q psy10372 2 GPDGHIAFNEPG 13 (63)
Q Consensus 2 G~nGHiafNePg 13 (63)
|+.||++-+-|.
T Consensus 7 g~~GH~~~~C~~ 18 (37)
T 2bl6_A 7 GKPGHLSSQCRA 18 (37)
T ss_dssp CCSSCCTTTSSC
T ss_pred CCCCcchhhCcC
Confidence 678888888765
No 28
>1nc8_A Nucleocapsid protein; HIV-2, RNA recognition, zinc finger, viral protein; NMR {Human immunodeficiency virus 2} SCOP: g.40.1.1 PDB: 2di2_A
Probab=26.19 E-value=24 Score=15.52 Aligned_cols=12 Identities=33% Similarity=0.446 Sum_probs=9.4
Q ss_pred CcCceeeccCCC
Q psy10372 2 GPDGHIAFNEPG 13 (63)
Q Consensus 2 G~nGHiafNePg 13 (63)
|..||++=|-|.
T Consensus 13 gk~GH~ar~C~~ 24 (29)
T 1nc8_A 13 GKEGHSARQCRA 24 (29)
T ss_dssp SCBSSCGGGCCS
T ss_pred CccccCHhHCcc
Confidence 678899888764
No 29
>2ovm_B NCOR, progesterone receptor; nuclear receptor, steroid receptor, CO-repressor, asoprisnil, transcription; HET: AS0; 2.60A {Homo sapiens}
Probab=22.76 E-value=38 Score=15.15 Aligned_cols=15 Identities=13% Similarity=0.355 Sum_probs=10.9
Q ss_pred CCCeeEEeCHHHHhc
Q psy10372 44 VPKEALTVGVGTVMD 58 (63)
Q Consensus 44 vP~~aiTmGi~tIm~ 58 (63)
+|+.+=+||+..|.+
T Consensus 4 ~~e~~~~~gleaiir 18 (26)
T 2ovm_B 4 FADPASNLGLEDIIR 18 (26)
T ss_pred CCCCccccCHHHHHH
Confidence 555555999998864
No 30
>1a6b_B Momulv, zinc finger protein NCP10; nucleocapsid protein, intercalation, nucleic acid, retrovirus, viral protein/DNA complex; HET: DNA; NMR {Synthetic} SCOP: g.40.1.1
Probab=21.78 E-value=47 Score=16.00 Aligned_cols=15 Identities=27% Similarity=0.286 Sum_probs=11.5
Q ss_pred CcCceeeccCCCCCC
Q psy10372 2 GPDGHIAFNEPGSSL 16 (63)
Q Consensus 2 G~nGHiafNePg~~~ 16 (63)
|.-|||+-+-|....
T Consensus 17 gk~GH~ardCP~~~~ 31 (40)
T 1a6b_B 17 KEKGHWAKDCPKKPR 31 (40)
T ss_dssp CCTTCCTTSCSSSCC
T ss_pred CCCCcchhhCcCCcc
Confidence 678999999887443
Done!