BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10387
(199 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 149 bits (376), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+D+F AG++T++++++++++Y+++ P +Q K+ +ELD +G SRRP L D+ HL Y++A
Sbjct: 285 LDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAF 344
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I E FR ++ P T+PH +T+ ++IPK +F++ W + HD+K + PS+F PER
Sbjct: 345 ILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPER 404
Query: 120 FLSPEGKFDKS-NPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQK 164
FL+P+G DK + I FG+G+R C G+ +A+ +FL++ Q+
Sbjct: 405 FLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQR 450
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 136 bits (342), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 109/173 (63%), Gaps = 17/173 (9%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAII 60
DIF AG++T++++++++++Y++ P IQ K+ +ELD +G RRP L D+ L Y++A I
Sbjct: 289 DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFI 348
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E FR ++ P T+PH +TT ++IPK +F++ W + HD + +E+PS+F+PERF
Sbjct: 349 LETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF 408
Query: 121 LSPEGKFDKSNPNAIN---------FGIGRRSCAGDFVAQNVMFLYVTTFFQK 164
L+ +G AIN FG+G+R C G+ +A+ +FL++ Q+
Sbjct: 409 LTADG-------TAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQ 454
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAII 60
D+FSAG T S+++A+ +L MIL+P +Q ++ QE+D+ +G RRP + D+ H+ Y A+I
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVI 338
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HEV R I P+ V H + + IPK T + +L S+ DE +E+P +F PE F
Sbjct: 339 HEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 121 LSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
L +G F K P A + F GRR+C G+ +A+ +FL+ T+ Q +S P S
Sbjct: 399 LDAQGHFVK--PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHH 456
Query: 180 AMSGFTTAPQPFKAIIRERY 199
+ F +P P++ R+
Sbjct: 457 GVFAFLVSPSPYELCAVPRH 476
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAII 60
D+FSAG T S+++A+ +L MIL+P +Q ++ QE+D+ +G RRP + D+ H+ Y A+I
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVI 338
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HEV R I P+ + H + + IPK T + +L S+ DE +E+P +F PE F
Sbjct: 339 HEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 121 LSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
L +G F K P A + F GRR+C G+ +A+ +FL+ T+ Q +S P S
Sbjct: 399 LDAQGHFVK--PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHH 456
Query: 180 AMSGFTTAPQPFKAIIRERY 199
+ F +P P++ R+
Sbjct: 457 GVFAFLVSPSPYELCAVPRH 476
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAII 60
D+F AG ET S+++ + +L ++ YP I+ KLH+E+D +G SR P + D+ + Y+ A++
Sbjct: 274 DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVV 333
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HE+ R T+ P +PH +T F Y IPK T++ +L S+ +D + F +P KFKPE F
Sbjct: 334 HEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF 393
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLST 178
L+ GKF S+ F G+R CAG+ +A+ +FL + Q +++ DP + DLS
Sbjct: 394 LNENGKFKYSD-YFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSP 452
Query: 179 KAMSGFTTAPQPFKAIIRER 198
+ GF P +K + R
Sbjct: 453 IHI-GFGCIPPRYKLCVIPR 471
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++ +E+++ +GS RP LDD+ + Y A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G K N + F +G+R CAG+ +A+ +FL+ TT Q +S+ P + DL+
Sbjct: 394 FLDANGAL-KRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
Query: 178 TKAMSGFTTAPQPFK 192
+ SG P ++
Sbjct: 453 PRE-SGVGNVPPSYQ 466
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAI 59
+ +F+AG ET S+++ + L M+ YP + ++ +E+++ +GS RP LDD+ + Y A+
Sbjct: 274 LSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G K N + F +G+R C G+ +A+ +FL+ TT Q +S+ P + DL+
Sbjct: 394 FLDANGAL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
Query: 178 TKAMSGFTTAPQPFK 192
+ SG P ++
Sbjct: 453 PRE-SGVGNVPPSYQ 466
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 133 bits (335), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 3/199 (1%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRR-PTLDDKHHLHYVQAII 60
DIF A +TLS+++ + +L YP +QT++ ELD+ +G R P + D+ +L YV A +
Sbjct: 286 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 345
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
+E R ++ P+T+PH NT+ Y IPKDT++F++ WS+ HD + P F P RF
Sbjct: 346 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405
Query: 121 LSPEGKFDKS-NPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
L +G +K + F +G+R C G+ +++ +FL+++ + +PN P
Sbjct: 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP-AKMN 464
Query: 180 AMSGFTTAPQPFKAIIRER 198
G T P+ FK + R
Sbjct: 465 FSYGLTIKPKSFKVNVTLR 483
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 114/201 (56%), Gaps = 7/201 (3%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAII 60
++ AG ET ++ + +A+L+M LYP IQ ++ +E+D +G + +P+ DDK + Y +A++
Sbjct: 280 ELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVL 339
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HEV R I P+ + H E+ Y IPK T + +L+S+ DEK + +P F PERF
Sbjct: 340 HEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERF 399
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNN--PDLST 178
L G F K + F +GRR C G+ +A+ MFL+ T Q++ +H P+ PDL
Sbjct: 400 LDSSGYFAKKEA-LVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF-PHELVPDL-- 455
Query: 179 KAMSGFTTAPQPFKAIIRERY 199
K G T PQP+ R+
Sbjct: 456 KPRLGMTLQPQPYLICAERRH 476
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 132 bits (333), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 7/200 (3%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAII 60
++ AG ET ++ + +A+L+M LYP IQ ++ +E+D +G + +P+ DDK + Y +A++
Sbjct: 280 ELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVL 339
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HEV R I P+ + H E+ Y IPK T + +L+S+ DEK + +P F PERF
Sbjct: 340 HEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERF 399
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNN--PDLST 178
L G F K + F +GRR C G+ +A+ MFL+ T Q++ +H P+ PDL
Sbjct: 400 LDSSGYFAKKEA-LVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF-PHELVPDL-- 455
Query: 179 KAMSGFTTAPQPFKAIIRER 198
K G T PQP+ R
Sbjct: 456 KPRLGMTLQPQPYLICAERR 475
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++ +E+++ +GS RP LDD+ + Y A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G K N + F +G+R C G+ +A+ +FL+ TT Q +S+ P + DL+
Sbjct: 394 FLDANGAL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
Query: 178 TKAMSGFTTAPQPFK 192
+ SG P ++
Sbjct: 453 PRE-SGVGNVPPSYQ 466
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++ +E+++ +GS RP LDD+ + Y A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G K N + F +G+R C G+ +A+ +FL+ TT Q +S+ P + DL+
Sbjct: 394 FLDANGAL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
Query: 178 TKAMSGFTTAPQPFK 192
+ SG P ++
Sbjct: 453 PRE-SGVGNVPPSYQ 466
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++ +E+++ +GS RP LDD+ + Y A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G K N + F +G+R C G+ +A+ +FL+ TT Q +S+ P + DL+
Sbjct: 394 FLDANGAL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
Query: 178 TKAMSGFTTAPQPFK 192
+ SG P ++
Sbjct: 453 PRE-SGVGNVPPSYQ 466
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 108/168 (64%), Gaps = 2/168 (1%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAII 60
DIF AG ET +S + + + +++ P ++ KL++E+D+++G SR PT+ D++ L ++A I
Sbjct: 280 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATI 339
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
EV R+ +AP+ +PH +++ ++ + K T + I+LW+L H+EK + +P +F PERF
Sbjct: 340 REVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
Query: 121 LSPEG-KFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSV 167
L+P G + + + + FG G RSC G+ +A+ +FL + Q++ +
Sbjct: 400 LNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDL 447
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 130 bits (326), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 118/192 (61%), Gaps = 5/192 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+++F AG ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y +A+
Sbjct: 274 LNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+ + H ++T F D+F+PK T +F L S+ D + F P F P+
Sbjct: 334 IHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQ--KYSVHRDPNNPDLS 177
FL +G+F KS+ + F IG+R C G+ +A+ +FL+ TT Q ++ + P + D+S
Sbjct: 394 FLDKKGQFKKSDA-FVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVS 452
Query: 178 TKAMSGFTTAPQ 189
K + GF T P+
Sbjct: 453 PKHV-GFATIPR 463
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 113/194 (58%), Gaps = 6/194 (3%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+D+F AG ET S+++ +A+L ++ +P + K+ +E++ +G +R P + D+ H+ Y A+
Sbjct: 273 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 332
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HEV R + P ++PH + F +Y IPK T I ISL S+ HD K F P F P
Sbjct: 333 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 392
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G F KS + F G+R C G+ +A +FL++T+ Q +++ DP N D +
Sbjct: 393 FLDEGGNFKKSK-YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLD-T 450
Query: 178 TKAMSGFTTAPQPF 191
T ++GF + P PF
Sbjct: 451 TPVVNGFASVP-PF 463
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 113/194 (58%), Gaps = 6/194 (3%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+D+F AG ET S+++ +A+L ++ +P + K+ +E++ +G +R P + D+ H+ Y A+
Sbjct: 275 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 334
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HEV R + P ++PH + F +Y IPK T I ISL S+ HD K F P F P
Sbjct: 335 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 394
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G F KS + F G+R C G+ +A +FL++T+ Q +++ DP N D +
Sbjct: 395 FLDEGGNFKKSK-YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLD-T 452
Query: 178 TKAMSGFTTAPQPF 191
T ++GF + P PF
Sbjct: 453 TPVVNGFASVP-PF 465
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+++F G ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y++A+
Sbjct: 274 LNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+++ ++T F D+F+PK T ++ L S+ D F P F P+
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLS 177
FL+ +G+F KS+ + F IG+R+C G+ +A+ +FL+ TT Q + + + P + D+S
Sbjct: 394 FLNEKGQFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
Query: 178 TKAMSGFTTAPQ 189
K + GF T P+
Sbjct: 453 PKHV-GFATIPR 463
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+++F AG ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y++A+
Sbjct: 274 LNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+ + ++T F D+F+PK T ++ L S+ D F P F P+
Sbjct: 334 IHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLS 177
FL+ +G+F KS+ + F IG+R+C G+ +A+ +FL+ TT Q + + + P + D+S
Sbjct: 394 FLNEKGQFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
Query: 178 TKAMSGFTTAPQ 189
K + GF T P+
Sbjct: 453 PKHV-GFATIPR 463
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 118/192 (61%), Gaps = 5/192 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+ +F G ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y++A+
Sbjct: 274 LQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+++ ++T F D+F+PK T ++ L S+ D F P F P+
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLS 177
FL+ +G+F KS+ + F IG+R+C G+ +A+ +FL+ TT Q + + + P + D+S
Sbjct: 394 FLNEKGQFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
Query: 178 TKAMSGFTTAPQ 189
K + GF T P+
Sbjct: 453 PKHV-GFATIPR 463
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 118/192 (61%), Gaps = 5/192 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+ +F G ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y++A+
Sbjct: 274 LQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+++ ++T F D+F+PK T ++ L S+ D F P F P+
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLS 177
FL+ +G+F KS+ + F IG+R+C G+ +A+ +FL+ TT Q + + + P + D+S
Sbjct: 394 FLNEKGQFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
Query: 178 TKAMSGFTTAPQ 189
K + GF T P+
Sbjct: 453 PKHV-GFATIPR 463
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 118/192 (61%), Gaps = 5/192 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+ +F G ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y++A+
Sbjct: 274 LQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+++ ++T F D+F+PK T ++ L S+ D F P F P+
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLS 177
FL+ +G+F KS+ + F IG+R+C G+ +A+ +FL+ TT Q + + + P + D+S
Sbjct: 394 FLNEKGQFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
Query: 178 TKAMSGFTTAPQ 189
K + GF T P+
Sbjct: 453 PKHV-GFATIPR 463
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 113/193 (58%), Gaps = 3/193 (1%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAII 60
D+F AG ET S+++ + +L ++ +P + K+ +E+D +G R P + D+ H+ Y A++
Sbjct: 275 DLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVV 334
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HE+ R + + P VPH +T F +Y IPK T I L S+ HD+K F P+ F P F
Sbjct: 335 HEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHF 394
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKA 180
L G F KS+ + F G+R CAG+ +A+ +FL++TT Q +++ + +L+T A
Sbjct: 395 LDKNGNFKKSD-YFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTA 453
Query: 181 MS-GFTTAPQPFK 192
++ G + P ++
Sbjct: 454 VTKGIVSLPPSYQ 466
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 6/193 (3%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAII 60
D+ AG ET S+++ +A+L ++ +P + K+ +E++ +G +R P + D+ H+ Y A++
Sbjct: 276 DLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVV 335
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HEV R + P ++PH + F +Y IPK T I SL S+ HD K F P F P F
Sbjct: 336 HEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHF 395
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLST 178
L G F KSN + F G+R C G+ +A+ +FL++T Q +++ DP + D +T
Sbjct: 396 LDEGGNFKKSN-YFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSLIDPKDLD-TT 453
Query: 179 KAMSGFTTAPQPF 191
++GF + P PF
Sbjct: 454 PVVNGFASVP-PF 465
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++++E+++ +G RP L D+ + Y +A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I+E+ R + + P+ VPH ++T+F Y IPKDT +F+ L + HD FE+P F P+
Sbjct: 334 IYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLS 177
FL G K+ I F +G+R C G+ +A+ +FL+ TT Q +S+ P + DL+
Sbjct: 394 FLDANGALKKTEA-FIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLT 452
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 123 bits (309), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAII 60
D+F AG ET S+++ +++L ++ +P + ++ +E++ +G R P + D+ + Y A+I
Sbjct: 272 DLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVI 331
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
HE+ R + P +PH + F +YFIPK T I SL S+ HDEK F P F P F
Sbjct: 332 HEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHF 391
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR--DPNNPDLST 178
L G F KS+ + F G+R C G+ +A+ +FL++T+ Q + + +P + D+ T
Sbjct: 392 LDESGNFKKSD-YFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQSLVEPKDLDI-T 449
Query: 179 KAMSGFTTAPQPFK 192
++GF + P ++
Sbjct: 450 AVVNGFVSVPPSYQ 463
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG----SRRPTLDDKHHLHYV 56
+D+F G ET +S++++AV +++ +P IQ +L +ELD LG R T D+ L +
Sbjct: 285 VDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLL 344
Query: 57 QAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFK 116
A I EV R+ + P+ +PH ++ + Y IP+ ++ +L DE +E+P +F+
Sbjct: 345 NATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFR 404
Query: 117 PERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNN--P 174
P+RFL P +NP+A+ FG G R C G+ +A+ +F+ + Q +++ P P
Sbjct: 405 PDRFLEP-----GANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALP 459
Query: 175 DLSTKAMSGFTTAPQPFKAIIRER 198
L G QPF+ ++ R
Sbjct: 460 SLQPDPYCGVNLKVQPFQVRLQPR 483
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAIIHEVF 64
AGYET SS ++F + + +P +Q KL +E+D L ++ P T D + Y+ +++E
Sbjct: 284 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 343
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R+ IA + + C ++ FIPK ++ I ++L D K + EP KF PER
Sbjct: 344 RLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER----- 397
Query: 125 GKFDKSNPNAIN------FGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
F K N + I+ FG G R+C G A M L + Q +S
Sbjct: 398 --FSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFS 443
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAIIHEVF 64
AGYET SS ++F + + +P +Q KL +E+D L ++ P T D + Y+ +++E
Sbjct: 283 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 342
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R+ IA + + C ++ FIPK ++ I ++L D K + EP KF PER
Sbjct: 343 RLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER----- 396
Query: 125 GKFDKSNPNAIN------FGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
F K N + I+ FG G R+C G A M L + Q +S
Sbjct: 397 --FSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFS 442
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAIIHEVF 64
AGYET SS ++F + + +P +Q KL +E+D L ++ P T D + Y+ +++E
Sbjct: 285 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 344
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R+ IA + + C ++ FIPK ++ I ++L D K + EP KF PER
Sbjct: 345 RLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER----- 398
Query: 125 GKFDKSNPNAIN------FGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
F K N + I+ FG G R+C G A M L + Q +S
Sbjct: 399 --FSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFS 444
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHL-GSRRPTLDDKHHLHYVQAIIHEVF 64
A ET ++S+ + + + P Q +L QE+ L ++ P +D ++ Y++A + E
Sbjct: 294 AAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESM 353
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R+ P T + T +Y +PK T++ ++ L E NFE+ KF+PER+L E
Sbjct: 354 RLTPSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE 412
Query: 125 GKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNP 174
K NP A + FGIG+R C G +A+ + L + QKY + N P
Sbjct: 413 KKI---NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEP 460
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRR-PTLDDKHHLHYVQAIIHE 62
F AG+ET ++ +AF V+ + P I +L E+DE +GS+R +D L Y+ ++ E
Sbjct: 252 FIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKE 311
Query: 63 VFRINTIAPITVPHCCMENTTFYDYF-IPKDTMIFISLWSLFHDEKNFEEPSKFKPERF- 120
R+ P +E T D +P +T + S + + + FE+P F P+RF
Sbjct: 312 SLRL--YPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFG 369
Query: 121 -LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNN 173
+P+ +F F +G RSC G AQ + + + Q+ P
Sbjct: 370 PGAPKPRF-----TYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ 418
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ETL+S+++ L + + I+ ++ QE ++ S+ T + + Y+ ++ EV R
Sbjct: 254 AGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLR 313
Query: 66 INTIAPITVP-HCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
+ I P+ +++ F + PK ++ + D + +P KF PERF +P+
Sbjct: 314 L--IPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF-TPD 370
Query: 125 GKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
G + P A + FG G R C G A+ M L+ T Q++
Sbjct: 371 GSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF 412
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLH----YVQ 57
++ + G T S ++ + + M +Q L +E+ L +RR D + ++
Sbjct: 283 EMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQAEGDISKMLQMVPLLK 339
Query: 58 AIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKP 117
A I E R++ I+ +T+ + DY IP T++ ++++++ D F P KF P
Sbjct: 340 ASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDP 398
Query: 118 ERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSV 167
R+LS + D + + FG G R C G +A+ M L++ + + V
Sbjct: 399 TRWLSKDK--DLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKV 446
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDK----HHLHYVQ 57
++ + G +T S ++ + + M +Q L E+ L +R D + ++
Sbjct: 282 EMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV---LAARHQAQGDMATMLQLVPLLK 338
Query: 58 AIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKP 117
A I E R++ I+ +T+ + + DY IP T++ +++++L + F +P F P
Sbjct: 339 ASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 397
Query: 118 ERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSV 167
R+LS + + + FG G R C G +A+ M +++ + + V
Sbjct: 398 TRWLSKDKNI--TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 445
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDK----HHLHYVQ 57
++ + G +T S ++ + + M +Q L E+ L +R D + ++
Sbjct: 279 EMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV---LAARHQAQGDMATMLQLVPLLK 335
Query: 58 AIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKP 117
A I E R++ I+ +T+ + + DY IP T++ +++++L + F +P F P
Sbjct: 336 ASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 394
Query: 118 ERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSV 167
R+LS + + + FG G R C G +A+ M +++ + + V
Sbjct: 395 TRWLSKDKNI--TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 442
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
+++ A +T+S S+ F + + +P ++ + +E+ +G R +DD L ++ I
Sbjct: 301 LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFI 360
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
+E R + + V +E+ Y + K T I +++ + H + F +P++F E F
Sbjct: 361 YESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRM-HRLEFFPKPNEFTLENF 418
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSV 167
+ + P FG G R CAG ++A +M + T +++ V
Sbjct: 419 -AKNVPYRYFQP----FGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K+ +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I + G ET++S++ + + + +P ++ E++ G R +D L + +I E
Sbjct: 271 ILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVE 330
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R+ + E + Y IP I S +++ D K++++ +F P+R+L
Sbjct: 331 AMRLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWL- 388
Query: 123 PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
PE + F G+R C D + + L KY
Sbjct: 389 PERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKY 431
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 KET--LTLKPEGF 444
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S + FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 265 AGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
I AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 IWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF---- 380
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 381 -----ENPSAIPQHAFKPFGNGQRACIG 403
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 267 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 326
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 327 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 382
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 383 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 436
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 437 KET--LTLKPEGF 447
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 KET--LTLKPEGF 444
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 380
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 381 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 434
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 435 K--ETLTLKPEGF 445
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 KET--LTLKPEGF 444
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 KET--LTLKPEGF 444
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 380
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 381 -----ENPSAIPQHAFKPFGNGQRACPG 403
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 380
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 381 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 434
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 435 KET--LTLKPEGF 445
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIG 402
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 KET--LTLKPEGF 444
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 LWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 380
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 381 -----ENPSAIPQHAFKPFGNGQRACIG 403
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 267 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 326
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ +P + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 327 LWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 382
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 383 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 436
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 437 KET--LTLKPEGF 447
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI +G G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E+ S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIG 402
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E+ S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 265 AGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 324
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 380
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 381 -----ENPSAIPQHAFKPFGNGQRACIG 403
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI +G G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E+ S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIG 402
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET S ++FA+ +++ P + K +E L P+ L YV +++E R+
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEG 125
AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----- 379
Query: 126 KFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
NP+AI FG G+R+C G A + L + + + D N +L K
Sbjct: 380 ----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIK 434
Query: 180 AMSGFTTAPQPF 191
T P+ F
Sbjct: 435 ET--LTLKPEGF 444
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 KET--LTLKPEGF 444
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET S ++FA+ +++ P + K +E L P+ L YV +++E R+
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEG 125
AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----- 379
Query: 126 KFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
NP+AI FG G+R+C G A + L + + + D N +L K
Sbjct: 380 ----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIK 434
Query: 180 AMSGFTTAPQPF 191
T P+ F
Sbjct: 435 ET--LTLKPEGF 444
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET S ++FA+ +++ P + K +E L P+ L YV +++E R+
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEG 125
AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----- 379
Query: 126 KFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
NP+AI FG G+R+C G A + L + + + D N +L K
Sbjct: 380 ----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIK 434
Query: 180 AMSGFTTAPQPF 191
T P+ F
Sbjct: 435 ET--LTLKPEGF 444
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 267 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 326
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ P + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 327 LWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 382
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 383 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 436
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 437 KET--LTLKPEGF 447
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET S ++FA+ +++ P + K +E L P+ L YV +++E R+
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEG 125
AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----- 379
Query: 126 KFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
NP+AI FG G+R+C G A + L + + + D N +L K
Sbjct: 380 ----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIK 434
Query: 180 AMSGFTTAPQPF 191
T P+ F
Sbjct: 435 ET--LTLKPEGF 444
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET S ++FA+ +++ P + K +E L P+ L YV +++E R+
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEG 125
AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----- 379
Query: 126 KFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
NP+AI FG G+R+C G A + L + + + D N +L K
Sbjct: 380 ----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIK 434
Query: 180 AMSGFTTAPQPF 191
T P+ F
Sbjct: 435 ET--LTLKPEGF 444
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET S ++FA+ +++ P + K +E L P+ L YV +++E R+
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEG 125
AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----- 379
Query: 126 KFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
NP+AI FG G+R+C G A + L + + + D N +L K
Sbjct: 380 ----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIK 434
Query: 180 AMSGFTTAPQPF 191
T P+ F
Sbjct: 435 ET--LTLKPEGF 444
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+E S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
+AG+E S ++FA+ +++ P + K +E L P+ L YV +++E
Sbjct: 262 LAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEA 321
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLS 122
R+ P + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 322 LRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-- 379
Query: 123 PEGKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 380 -------ENPSAIPQHAFKPFGNGQRACIG 402
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
+AG+E S ++FA+ +++ P + K +E L P+ L YV +++E
Sbjct: 263 LAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEA 322
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLS 122
R+ P + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 323 LRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-- 380
Query: 123 PEGKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 381 -------ENPSAIPQHAFKPFGNGQRACIG 403
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI G G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E R
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALR 323
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPE 124
+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 324 LWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF---- 379
Query: 125 GKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
NP+AI G G+R+C G A + L + + + D N +L
Sbjct: 380 -----ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDI 433
Query: 179 KAMSGFTTAPQPF 191
K T P+ F
Sbjct: 434 K--ETLTLKPEGF 444
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
+AG+E S ++FA+ +++ P K +E L P+ L YV +++E
Sbjct: 262 LAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEA 321
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLS 122
R+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-- 379
Query: 123 PEGKFDKSNPNAI------NFGIGRRSCAG 146
NP+AI FG G+R+C G
Sbjct: 380 -------ENPSAIPQHAFKPFGNGQRACIG 402
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
+AG+E S ++FA+ +++ P K +E L P+ L YV +++E
Sbjct: 263 LAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEA 322
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLS 122
R+ AP + + +Y + K + + + L D+ + ++ +F+PERF
Sbjct: 323 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-- 380
Query: 123 PEGKFDKSNPNAI------NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDL 176
NP+AI FG G+R+C G A + L + + + D N +L
Sbjct: 381 -------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYEL 432
Query: 177 STKAMSGFTTAPQPF 191
K T P+ F
Sbjct: 433 DIKET--LTLKPEGF 445
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
+AG ET +S +A + L ++ P + +L ++ D + A + E+
Sbjct: 247 INAGRETTTSMIALSTLLLLDRPELPAELRKDPD-----------------LMPAAVDEL 289
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSP 123
R+ ++A E+ +P D + L HD + F++P +
Sbjct: 290 LRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERV-------- 341
Query: 124 EGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR 169
F +++ + + FG G C G +A+ + + + T ++ R
Sbjct: 342 --DFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLR 385
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQE-------LDEHLGSRRPTLDDKHHL 53
M++ + +T + + + + P +Q L QE + EH ++ T + L
Sbjct: 283 MELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEH--PQKATTE----L 336
Query: 54 HYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPS 113
++A + E R+ + + + + +Y IP T++ + L+SL + F P
Sbjct: 337 PLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPE 395
Query: 114 KFKPERFLSPEGKFDKSNPNAINFGIGRRSCAG 146
++ P+R+L G N + + FG G R C G
Sbjct: 396 RYNPQRWLDIRG--SGRNFHHVPFGFGMRQCLG 426
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 10/122 (8%)
Query: 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFG 138
M + Y +PK +I S HDE+ F EP ++ PER EG F I FG
Sbjct: 336 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAF-------IGFG 388
Query: 139 IGRRSCAGDFVAQNVMFLYVTTFFQKY--SVHRDPNNPDLSTKAMSGFTTAPQPFKAIIR 196
G C G + + T F+ Y + RD PD M TA Q IR
Sbjct: 389 AGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDYHTMVVGPTASQCRVKYIR 447
Query: 197 ER 198
+
Sbjct: 448 RK 449
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 10/122 (8%)
Query: 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFG 138
M + Y +PK +I S HDE+ F EP ++ PER EG F I FG
Sbjct: 337 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAF-------IGFG 389
Query: 139 IGRRSCAGDFVAQNVMFLYVTTFFQKY--SVHRDPNNPDLSTKAMSGFTTAPQPFKAIIR 196
G C G + + T F+ Y + RD PD M TA Q IR
Sbjct: 390 AGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDYHTMVVGPTASQCRVKYIR 448
Query: 197 ER 198
+
Sbjct: 449 RK 450
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 10/122 (8%)
Query: 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFG 138
M + Y +PK +I S HDE+ F EP ++ PER EG F I FG
Sbjct: 337 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAF-------IGFG 389
Query: 139 IGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLSTKAMSGFTTAPQPFKAIIR 196
G C G + + T F+ Y RD PD M TA Q IR
Sbjct: 390 AGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDYHTMVVGPTASQCRVKYIR 448
Query: 197 ER 198
+
Sbjct: 449 RK 450
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 10/122 (8%)
Query: 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFG 138
M + Y +PK +I S HDE+ F EP ++ PER EG F I FG
Sbjct: 350 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAF-------IGFG 402
Query: 139 IGRRSCAGDFVAQNVMFLYVTTFFQKYSVH--RDPNNPDLSTKAMSGFTTAPQPFKAIIR 196
G C G + + T F+ Y RD PD M TA Q IR
Sbjct: 403 AGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDYHTMVVGPTASQCRVKYIR 461
Query: 197 ER 198
+
Sbjct: 462 RK 463
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 10/122 (8%)
Query: 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFG 138
M + Y +PK +I S HDE+ F EP ++ PER EG F I FG
Sbjct: 350 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAF-------IGFG 402
Query: 139 IGRRSCAGDFVAQNVMFLYVTTFFQKY--SVHRDPNNPDLSTKAMSGFTTAPQPFKAIIR 196
G C G + + T F+ Y + RD PD M TA Q IR
Sbjct: 403 AGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDYHTMVVGPTASQCRVKYIR 461
Query: 197 ER 198
+
Sbjct: 462 RK 463
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFG 138
M + Y +PK +I S HDE+ F EP ++ PER EG F I FG
Sbjct: 338 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAF-------IGFG 390
Query: 139 IGRRSCAGDFVAQNVMFLYVTTFFQKY 165
G C G + + T F+ Y
Sbjct: 391 AGVHKCIGQKFGLLQVKTILATAFRSY 417
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 276 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 336 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 276 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 336 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + + E+ D + + I S S DE+ FE P +F R
Sbjct: 277 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 336
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 337 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + E+ D + + I S S DE+ FE P +F R
Sbjct: 275 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 335 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + E+ D + + I S S DE+ FE P +F R
Sbjct: 276 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 336 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E+ R +T + + E+ D + + I S S DE+ FE P +F R
Sbjct: 276 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P+ + + FG G C + +A+ + +T +QK+
Sbjct: 336 KWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQT---KLHQELDEHLGSRR--PTLDDKHHLHYVQAII 60
AG T + + ++++L++ ++P + KLH+E+DE +D+ + + + +
Sbjct: 277 AGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE---MPFAERCV 332
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E R + + V Y +PK +I S HDE+ F P + PER
Sbjct: 333 RESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERD 391
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
+G F I FG G C G A + + T F++Y
Sbjct: 392 EKVDGAF-------IGFGAGVHKCIGQKFALLQVKTILATAFREY 429
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQT---KLHQELDEHLGSRR--PTLDDKHHLHYVQAII 60
AG T + + ++++L++ ++P + KLH+E+DE +D+ + + + +
Sbjct: 268 AGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE---MPFAERCV 323
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E R + + V Y +PK +I S HDE+ F P + PER
Sbjct: 324 RESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERD 382
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
+G F I FG G C G A + + T F++Y
Sbjct: 383 EKVDGAF-------IGFGAGVHKCIGQKFALLQVKTILATAFREY 420
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQT---KLHQELDEHLGSRR--PTLDDKHHLHYVQAII 60
AG T + + ++++L++ ++P + KLH+E+DE +D+ + + + +
Sbjct: 262 AGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE---MPFAERCV 317
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E R + + V Y +PK +I S HDE+ F P + PER
Sbjct: 318 RESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERD 376
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
+G F I FG G C G A + + T F++Y
Sbjct: 377 EKVDGAF-------IGFGAGVHKCIGQKFALLQVKTILATAFREY 414
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSK 114
Y + + EV R P V ++ + P+ + + L+ HD + +P +
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 115 FKPERFLSPEGKFDKSNPNAINFGIG----RRSCAGDFVAQNVM 154
F+PERF + +D+ + N I G G C G+++ +M
Sbjct: 332 FRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIM 371
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSK 114
Y + + EV R P V ++ + P+ + + L+ HD + +P +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 115 FKPERFLSPEGKFDKSNPNAINFGIG----RRSCAGDFVAQNVM 154
F+PERF + +D+ + N I G G C G+++ +M
Sbjct: 332 FRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIM 371
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSK 114
Y + + EV R P V ++ + P+ + + L+ HD + +P +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 115 FKPERFLSPEGKFDKSNPNAINFGIG----RRSCAGDFVAQNVM 154
F+PERF + +D+ + N I G G C G+++ +M
Sbjct: 332 FRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIM 371
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSK 114
Y + + EV R P V ++ + P+ + + L+ HD + +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 115 FKPERFLSPEGKFDKSNPNAINFGIG----RRSCAGDFVAQNVM 154
F+PERF + +D+ + N I G G C G+++ +M
Sbjct: 324 FRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIM 363
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSK 114
Y + + EV R P V ++ + P+ + + L+ HD + +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 115 FKPERFLSPEGKFDKSNPNAINFGIG----RRSCAGDFVAQNVM 154
F+PERF + +D+ + N I G G C G+++ +M
Sbjct: 324 FRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIM 363
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSK 114
Y + + EV R P V ++ + P+ + + L+ HD + +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 115 FKPERFLSPEGKFDKSNPNAINFGIG----RRSCAGDFVAQNVM 154
F+PERF + +D+ + N I G G C G+++ +M
Sbjct: 324 FRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIM 363
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 27/163 (16%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I +AG +T +AFAVL ++ P + E G R LD E
Sbjct: 251 IIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE----PGLMRNALD-------------E 293
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
V R + I I ++ + I K M+F+ + S D F P F R S
Sbjct: 294 VLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTS 353
Query: 123 PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
++ +G G C G +A+ + V T F+++
Sbjct: 354 ----------ASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 27/163 (16%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I +AG +T +AFAVL ++ P + E G R LD E
Sbjct: 251 IIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE----PGLMRNALD-------------E 293
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
V R I I ++ + I K M+F+ + S D F P F R S
Sbjct: 294 VLRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTS 353
Query: 123 PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
++ +G G C G +A+ + V T F+++
Sbjct: 354 ----------ASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 32/189 (16%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET + +A A L M+ P L + GSR A+I E
Sbjct: 253 LLIAGHETTVNLIANAALAMLRTPGQWAALAAD-----GSR------------ASAVIEE 295
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R + + V ++ T + +PK + + L + D P +F P
Sbjct: 296 TMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP----- 349
Query: 123 PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPD----LST 178
D++ + FG G C G +A+ + + ++ R P+ L+
Sbjct: 350 -----DRAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEPEYKRNLTL 404
Query: 179 KAMSGFTTA 187
+ MS + A
Sbjct: 405 RGMSTLSIA 413
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 23/135 (17%)
Query: 49 DKHHLHY---------VQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISL 99
D+H H+ + AI+ EV R P + + T IP D M+ +
Sbjct: 278 DEHPAHWDAAAEDPGRIPAIVEEVLRYRPPFP-QMQRTTTKATEVAGVPIPADVMVNTWV 336
Query: 100 WSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQ---NVMF 155
S D ++P +F P R KS A ++FG G C G +A+ V
Sbjct: 337 LSANRDSDAHDDPDRFDPSR---------KSGGAAQLSFGHGVHFCLGAPLARLENRVAL 387
Query: 156 LYVTTFFQKYSVHRD 170
+ F + +V RD
Sbjct: 388 EEIIARFGRLTVDRD 402
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 23/135 (17%)
Query: 49 DKHHLHY---------VQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISL 99
D+H H+ + AI+ EV R P + + T IP D M+ +
Sbjct: 258 DEHPAHWDAAAEDPGRIPAIVEEVLRYRPPFP-QMQRTTTKATEVAGVPIPADVMVNTWV 316
Query: 100 WSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQ---NVMF 155
S D ++P +F P R KS A ++FG G C G +A+ V
Sbjct: 317 LSANRDSDAHDDPDRFDPSR---------KSGGAAQLSFGHGVHFCLGAPLARLENRVAL 367
Query: 156 LYVTTFFQKYSVHRD 170
+ F + +V RD
Sbjct: 368 EEIIARFGRLTVDRD 382
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 104 HDEKNFEEPSKFKPERFLSPEGK------FDKSNPNAINFGIGRRSCAG-DFVAQNVMFL 156
D K F+ +F PERF+ EG+ + P +G + CAG DFV V L
Sbjct: 398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVL-VARL 456
Query: 157 YVTTFFQKY 165
+V F++Y
Sbjct: 457 FVIEIFRRY 465
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 104 HDEKNFEEPSKFKPERFLSPEGK------FDKSNPNAINFGIGRRSCAG-DFVAQNVMFL 156
D K F+ +F PERF+ EG+ + P +G + CAG DFV V L
Sbjct: 398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVL-VARL 456
Query: 157 YVTTFFQKY 165
+V F++Y
Sbjct: 457 FVIEIFRRY 465
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 74 VPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF-LSPEGKFDKSNP 132
+P ++T I KDT++F + + D + FE+P F R L + F +
Sbjct: 319 IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAAR 378
Query: 133 NAINFGIGRRSCAGDFVAQNVMFLYVTTFFQK 164
+ + FG G +C G A+N + + K
Sbjct: 379 H-LAFGSGIHNCVGTAFAKNEIEIVANIVLDK 409
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 33/174 (18%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIH 61
++ G ET ++ AV + P + T L R + D V ++
Sbjct: 250 NVLIGGNETTRHAITGAVHALATVPGLLTAL----------RDGSAD-------VDTVVE 292
Query: 62 EVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFL 121
EV R + A + V + T +P T + L + D F++P F P R
Sbjct: 293 EVLRWTSPA-MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR-- 349
Query: 122 SPEGKFDKSNPNA-INFGIGRRSCAGDFVAQ---NVMFLYVTTFFQKYSVHRDP 171
PN I FG G C G +A+ +V+ + + + R+P
Sbjct: 350 ---------KPNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREP 394
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 12/105 (11%)
Query: 91 KDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVA 150
K T + + L+ HD + ++ P +F+PERF E P C G+ +
Sbjct: 310 KGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGIT 369
Query: 151 QNVMFLYVTTFFQK-----------YSVHRDPNNPDLSTKAMSGF 184
VM + + YS+ R P+ P+ S MSG
Sbjct: 370 IEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPE-SGFVMSGI 413
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 27/162 (16%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ +AG+ET ++ ++ V+ ++ +P T + K + + E
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVV-----------------KANPGRTPMAVEE 284
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R TIA E+ I + +S+ S D F++P+ ER
Sbjct: 285 LLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER--- 341
Query: 123 PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQK 164
+ + FG G C G +A+ + + T F++
Sbjct: 342 -------GARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 76 HCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAI 135
E D I + ++ + + S DE+ F++P F P+R +P +
Sbjct: 259 RVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPH----------L 308
Query: 136 NFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSGF 184
+FG G C G +A+ + + F +K+ V + + ++G+
Sbjct: 309 SFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNGY 357
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 109 FEEPSKFKPERFLSPEGKFDKSNPNA--INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
F E F+PERFL+ ++ P+ FG+G+R C G A + + FF+++
Sbjct: 304 FPEGEAFQPERFLA-----ERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR 358
Query: 167 VHRDP 171
+ DP
Sbjct: 359 L--DP 361
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 33/170 (19%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET++S++ ++ L + P Q ++ + A E
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAE-----------------SEEAALAAFQE 260
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEK-NFEEPSKFKPERFL 121
R+ A I D P T++ S + ++ +F + F+PERFL
Sbjct: 261 ALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVL----SPYVTQRLHFPDGEAFRPERFL 316
Query: 122 ----SPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSV 167
+P G++ FG+G+R C G A + + FF+++ +
Sbjct: 317 EERGTPSGRY-------FPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 18/148 (12%)
Query: 50 KHHLHYVQAIIHEVFRINTIAPITVPH---CCMENTTFYDYFIPKDTMIFISLWSLFHDE 106
K + + I+ E R T V H +T I + ++ + HD
Sbjct: 316 KADRNLLPGIVEEAIRWTT----PVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDP 371
Query: 107 KNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
F EP KF P R P + + FG G C G +A+ M + + +
Sbjct: 372 AQFPEPRKFDPTR---PANRH-------LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
Query: 167 VHRDPNNPD-LSTKAMSGFTTAPQPFKA 193
P +++ + GF + P +KA
Sbjct: 422 SLELAGEPKRVNSTFVGGFKSLPMRWKA 449
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 117 PERFLSPEGKFDKSNPNA----INFGIGRRSCAGDFVAQ---NVMFLYVTTFFQKYSVHR 169
PE F P+ FD + P A ++FG+G SCAG +++ +F + +++ +
Sbjct: 315 PEVFDDPD-VFDHTRPPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAE 373
Query: 170 DPN 172
+P
Sbjct: 374 EPT 376
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 117 PERFLSPEGKFDKSNPNA----INFGIGRRSCAGDFVAQ---NVMFLYVTTFFQKYSVHR 169
PE F P+ FD + P A ++FG+G SCAG +++ +F + +++ +
Sbjct: 313 PEVFDDPD-VFDHTRPPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAE 371
Query: 170 DPN 172
+P
Sbjct: 372 EPT 374
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 87 YFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS-PEGKFDKSNPNAINFGIGRRSCA 145
Y +P+ +I S DE+ F P ++ PER + +G F FG G C
Sbjct: 344 YVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVDGAF-------CGFGAGVHKCI 396
Query: 146 GD 147
G+
Sbjct: 397 GE 398
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 42/153 (27%)
Query: 7 GYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRI 66
G+ET++S + AVL ++ +P +LD L RRP L QA+ E R
Sbjct: 234 GHETVASQVGNAVLSLLAHP-------DQLD--LLRRRPDL-------LAQAV-EECLRY 276
Query: 67 NTIAPITVPHCCMENTTFYDYFIPKDT-------MIFISLWSLFHDEKNFEEPSKFKPER 119
+ NT D + ++ + + D + ++ P F ER
Sbjct: 277 DP--------SVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER 328
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQN 152
P +++FG G R C G ++A+
Sbjct: 329 DPVP----------SMSFGAGMRYCLGSYLART 351
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAIIHEVF 64
AG+ T S + ++ ++ ++ + + ELDE G R + + ++ ++ E
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R++ I + + I + ++ S ++F +P F P R+ P
Sbjct: 316 RLHP-PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
+ + I FG GR C G
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVF 64
AG+ T S + ++ ++ ++ + + ELDE G R + + ++ ++ E
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R++ I + + I + ++ S ++F +P F P R+ P
Sbjct: 316 RLHP-PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
+ + I FG GR C G
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVG 396
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVF 64
AG+ T S + ++ ++ ++ + + ELDE G R + + ++ ++ E
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R++ I + + I + ++ S ++F +P F P R+ P
Sbjct: 316 RLHP-PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
+ + I FG GR C G
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVG 396
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVF 64
AG+ T S + ++ ++ ++ + + ELDE G R + + ++ ++ E
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R++ I + + I + ++ S ++F +P F P R+ P
Sbjct: 316 RLHP-PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPR 374
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
+ + I FG GR C G
Sbjct: 375 QEDLLNRWTWIPFGAGRHRCVG 396
>pdb|2ASH|A Chain A, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
pdb|2ASH|B Chain B, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
pdb|2ASH|C Chain C, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
pdb|2ASH|D Chain D, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
Length = 381
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQT-KLHQELDEHLGSRRPTLDD 49
D+ AG E + S+ +++L P ++ KLH+ L +G +RP L D
Sbjct: 57 DLEEAGAEIILSN----TFHLMLKPGVEIIKLHRGLHNFMGWKRPILTD 101
>pdb|1JB0|F Chain F, Crystal Structure Of Photosystem I: A Photosynthetic
Reaction Center And Core Antenna System From
Cyanobacteria
pdb|3PCQ|F Chain F, Femtosecond X-Ray Protein Nanocrystallography
pdb|4FE1|F Chain F, Improving The Accuracy Of Macromolecular Structure
Refinement At 7 A Resolution
Length = 164
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 140 GRRSCAGDFVAQNVMFLYVTTFF 162
GR S AGDF+ +V+FLY+ +
Sbjct: 78 GRLSRAGDFLIPSVLFLYIAGWI 100
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 92 DTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGK----FDKSNPNAINF----GIGRRS 143
D ++ S D + + +P FK RFL+P+G F K N+ G G
Sbjct: 359 DRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNH 418
Query: 144 CAGDFVAQNVMFLYV 158
C G A N + +V
Sbjct: 419 CLGRSYAVNSIKQFV 433
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 28/159 (17%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET + ++ +VL ++ +P KL + D + + E R
Sbjct: 234 AGHETTVNLISNSVLCLLQHPEQLLKLRENPD-----------------LIGTAVEECLR 276
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+ +T E+ I + +++ L + D F P F R SP
Sbjct: 277 YESPTQMTA-RVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR--SP-- 331
Query: 126 KFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQK 164
NP+ ++FG G C G +A+ + + T Q+
Sbjct: 332 -----NPH-LSFGHGHHVCLGSSLARLEAQIAINTLLQR 364
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 92 DTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGK----FDKSNPNAINF----GIGRRS 143
D ++ S D + + +P FK RFL+P+G F K N+ G G
Sbjct: 371 DRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNH 430
Query: 144 CAGDFVAQNVMFLYV 158
C G A N + +V
Sbjct: 431 CLGRSYAVNSIKQFV 445
>pdb|3SDO|A Chain A, Structure Of A Nitrilotriacetate Monooxygenase From
Burkholderia Pseudomallei
pdb|3SDO|B Chain B, Structure Of A Nitrilotriacetate Monooxygenase From
Burkholderia Pseudomallei
Length = 453
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 147 DFVAQNVMFLYVTTFFQKYSVHRDPNN---PDLSTKAMSGFTTAPQPFKAIIRER 198
D ++ Y++ FFQ++ P + PD+ T GF + K + RER
Sbjct: 293 DLLSPREALAYLSHFFQQHDFSVYPLDGPFPDIGTLGSDGFQSTTDNIKRLARER 347
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,153,765
Number of Sequences: 62578
Number of extensions: 249982
Number of successful extensions: 810
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 615
Number of HSP's gapped (non-prelim): 142
length of query: 199
length of database: 14,973,337
effective HSP length: 94
effective length of query: 105
effective length of database: 9,091,005
effective search space: 954555525
effective search space used: 954555525
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)