Query psy10387
Match_columns 199
No_of_seqs 160 out of 1317
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 16:32:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10387.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10387hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158|consensus 100.0 2.3E-53 5E-58 354.3 17.5 195 2-198 301-498 (499)
2 PLN02971 tryptophan N-hydroxyl 100.0 1.9E-51 4.1E-56 352.9 19.1 196 2-198 334-533 (543)
3 KOG0156|consensus 100.0 1.4E-51 3.1E-56 346.3 16.9 193 2-198 293-487 (489)
4 PLN02394 trans-cinnamate 4-mon 100.0 3.3E-51 7.1E-56 348.8 18.2 197 2-198 300-501 (503)
5 PTZ00404 cytochrome P450; Prov 100.0 1E-50 2.3E-55 344.1 17.9 191 2-198 290-482 (482)
6 PLN02500 cytochrome P450 90B1 100.0 5.5E-50 1.2E-54 340.3 17.4 191 2-197 286-488 (490)
7 PLN03234 cytochrome P450 83B1; 100.0 7.5E-50 1.6E-54 340.1 17.3 197 2-198 295-498 (499)
8 PF00067 p450: Cytochrome P450 100.0 1.7E-50 3.6E-55 337.0 12.9 194 2-195 269-463 (463)
9 KOG0157|consensus 100.0 9.7E-50 2.1E-54 338.6 17.7 193 2-198 298-495 (497)
10 PLN02183 ferulate 5-hydroxylas 100.0 1.2E-49 2.5E-54 340.2 17.4 196 2-198 311-511 (516)
11 KOG0159|consensus 100.0 3.7E-50 8E-55 330.3 13.1 193 1-198 322-517 (519)
12 PLN02169 fatty acid (omega-1)- 100.0 2.1E-49 4.5E-54 337.3 17.4 189 2-199 308-500 (500)
13 PLN00168 Cytochrome P450; Prov 100.0 2.6E-49 5.7E-54 338.2 17.7 196 2-198 313-516 (519)
14 PLN03018 homomethionine N-hydr 100.0 4.5E-49 9.9E-54 337.2 19.1 197 2-198 321-523 (534)
15 PLN02966 cytochrome P450 83A1 100.0 3.3E-49 7.1E-54 336.4 17.7 172 2-173 296-471 (502)
16 PLN00110 flavonoid 3',5'-hydro 100.0 4.2E-49 9.2E-54 335.8 18.1 196 2-198 296-496 (504)
17 PLN02738 carotene beta-ring hy 100.0 7.4E-49 1.6E-53 340.5 18.5 194 2-198 398-594 (633)
18 PLN02290 cytokinin trans-hydro 100.0 4.9E-49 1.1E-53 336.4 16.9 190 2-198 323-514 (516)
19 PLN02655 ent-kaurene oxidase 100.0 1.3E-48 2.9E-53 330.0 17.2 194 2-198 269-463 (466)
20 PLN03195 fatty acid omega-hydr 100.0 7.6E-49 1.7E-53 335.2 15.2 193 2-198 299-515 (516)
21 PLN03112 cytochrome P450 famil 100.0 3E-48 6.6E-53 331.4 18.3 197 2-198 303-507 (514)
22 PLN02687 flavonoid 3'-monooxyg 100.0 3.5E-48 7.5E-53 331.2 18.1 197 2-198 304-508 (517)
23 PLN02426 cytochrome P450, fami 100.0 3.3E-48 7.1E-53 329.9 17.5 195 2-198 300-499 (502)
24 PLN02774 brassinosteroid-6-oxi 100.0 6.9E-48 1.5E-52 325.4 16.9 188 2-197 271-462 (463)
25 PLN02936 epsilon-ring hydroxyl 100.0 1.6E-47 3.4E-52 325.1 16.9 195 2-199 285-482 (489)
26 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-47 3.3E-52 322.5 16.3 186 2-198 258-449 (452)
27 PLN02302 ent-kaurenoic acid ox 100.0 1.4E-46 3E-51 319.2 16.7 190 2-199 294-488 (490)
28 PLN02196 abscisic acid 8'-hydr 100.0 2.6E-46 5.6E-51 315.8 15.7 188 2-198 271-462 (463)
29 PLN02987 Cytochrome P450, fami 100.0 1.9E-45 4.2E-50 310.9 17.7 190 2-198 274-468 (472)
30 KOG0684|consensus 100.0 1.5E-44 3.3E-49 291.6 13.3 194 2-198 280-484 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 6.5E-40 1.4E-44 272.8 12.3 145 2-172 243-387 (411)
32 PLN02648 allene oxide synthase 100.0 8.1E-39 1.8E-43 270.2 15.8 164 6-173 283-463 (480)
33 PF08492 SRP72: SRP72 RNA-bind 65.1 5 0.00011 24.0 1.6 8 116-123 44-51 (59)
34 PF12508 DUF3714: Protein of u 63.9 2.2 4.9E-05 32.2 -0.0 42 54-97 53-94 (200)
35 PF05952 ComX: Bacillus compet 54.4 15 0.00032 21.8 2.3 23 17-39 4-26 (57)
36 PF09201 SRX: SRX; InterPro: 46.9 18 0.0004 25.6 2.2 24 142-165 18-41 (148)
37 PF12444 Sox_N: Sox developmen 44.3 16 0.00034 23.6 1.5 21 152-172 60-80 (84)
38 TIGR03779 Bac_Flav_CT_M Bacter 42.2 6 0.00013 33.3 -0.8 20 79-98 279-298 (410)
39 PF10264 Stork_head: Winged he 39.5 69 0.0015 20.4 3.8 40 11-50 12-54 (80)
40 PF14550 Peptidase_U35_2: Puta 36.6 24 0.00052 24.5 1.5 21 77-97 72-92 (122)
41 PF08285 DPM3: Dolichol-phosph 35.4 57 0.0012 21.3 3.1 28 13-40 54-81 (91)
42 KOG3302|consensus 33.5 13 0.00027 27.9 -0.2 57 113-169 50-117 (200)
43 KOG3506|consensus 32.7 21 0.00045 20.9 0.6 11 135-145 12-22 (56)
44 PRK06789 flagellar motor switc 31.1 56 0.0012 20.5 2.4 41 59-99 21-63 (74)
45 PF11227 DUF3025: Protein of u 28.7 31 0.00068 26.3 1.2 20 100-119 192-211 (212)
46 cd00652 TBP_TLF TATA box bindi 26.0 46 0.00099 24.6 1.6 56 113-169 29-87 (174)
47 PF02663 FmdE: FmdE, Molybdenu 25.5 70 0.0015 22.1 2.4 23 141-163 4-26 (131)
48 cd04518 TBP_archaea archaeal T 25.1 16 0.00034 27.0 -0.9 56 113-169 29-87 (174)
49 PF14824 Sirohm_synth_M: Siroh 24.7 1E+02 0.0023 15.6 2.3 15 25-39 15-29 (30)
50 KOG2376|consensus 24.0 54 0.0012 29.1 1.9 37 105-146 571-607 (652)
51 PRK13467 F0F1 ATP synthase sub 23.4 1.5E+02 0.0032 18.1 3.2 24 12-35 20-43 (66)
52 COG2101 SPT15 TATA-box binding 22.5 25 0.00054 26.0 -0.3 36 113-148 35-70 (185)
53 PF11138 DUF2911: Protein of u 22.1 77 0.0017 22.7 2.1 21 78-98 52-72 (145)
54 cd04516 TBP_eukaryotes eukaryo 22.0 37 0.00081 25.1 0.5 56 113-169 29-87 (174)
55 PF14129 DUF4296: Domain of un 21.6 2.2E+02 0.0047 18.1 4.0 33 8-40 46-78 (87)
No 1
>KOG0158|consensus
Probab=100.00 E-value=2.3e-53 Score=354.32 Aligned_cols=195 Identities=30% Similarity=0.483 Sum_probs=174.6
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
.|++||.||||+++++++|+|++||++|+||++||++++. ...+++|.+.+|+||++||+||||+||+++. ..|.|++
T Consensus 301 vFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k 379 (499)
T KOG0158|consen 301 VFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTK 379 (499)
T ss_pred HHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecC
Confidence 3678999999999999999999999999999999999977 3339999999999999999999999999997 9999999
Q ss_pred Cceec-cEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHHH
Q psy10387 81 NTTFY-DYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVT 159 (199)
Q Consensus 81 d~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 159 (199)
|+++. ++.|+||+.|.++.+++||||++||||++|+||||++++.+.. .+..|+|||.|||+|+|.+||.+|+|+.|+
T Consensus 380 ~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~-~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~ 458 (499)
T KOG0158|consen 380 DYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNKSR-HPGAYLPFGVGPRNCIGMRFALMEAKLALA 458 (499)
T ss_pred ceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccccc-CCccccCCCCCccccHHHHHHHHHHHHHHH
Confidence 99999 9999999999999999999999999999999999998876533 378999999999999999999999999999
Q ss_pred HHHHhceeeeCCCCCCCCCCccCCceecCc-ceeEEEEec
Q psy10387 160 TFFQKYSVHRDPNNPDLSTKAMSGFTTAPQ-PFKAIIRER 198 (199)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R 198 (199)
+||++|+++.++...........+++..|. ++++++.+|
T Consensus 459 ~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r 498 (499)
T KOG0158|consen 459 HLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPR 498 (499)
T ss_pred HHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeC
Confidence 999999999988332221111236666675 699999988
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=1.9e-51 Score=352.93 Aligned_cols=196 Identities=26% Similarity=0.449 Sum_probs=175.5
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++||+++++ ++.++.+++.+|||++|+|+|++|++|++|+.++|.+.+
T Consensus 334 ~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~ 413 (543)
T PLN02971 334 ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALS 413 (543)
T ss_pred HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCC
Confidence 6789999999999999999999999999999999999998 677899999999999999999999999999778999999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCC--CCCCCCccccCCCCCccccHHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKF--DKSNPNAINFGIGRRSCAGDFVAQNVMFLYV 158 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l 158 (199)
|++++||.||||+.|+++.|++||||++|+||++|+||||++++... ...+..|+|||.|+|.|+|+++|++|+++++
T Consensus 414 d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~l 493 (543)
T PLN02971 414 DTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMML 493 (543)
T ss_pred CeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754321 1225689999999999999999999999999
Q ss_pred HHHHHhceeeeCCCCCCCCCCccCCcee-cCcceeEEEEec
Q psy10387 159 TTFFQKYSVHRDPNNPDLSTKAMSGFTT-APQPFKAIIRER 198 (199)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~R 198 (199)
+.|+++|+|+..++....+.....+ +. .++++.+.+.+|
T Consensus 494 a~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 533 (543)
T PLN02971 494 ARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELR 533 (543)
T ss_pred HHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeec
Confidence 9999999999887654444444445 44 677888888887
No 3
>KOG0156|consensus
Probab=100.00 E-value=1.4e-51 Score=346.32 Aligned_cols=193 Identities=32% Similarity=0.598 Sum_probs=172.4
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||++++.|++.+|++||++|+|+++||++++| ++.++.+|+.++|||+|+|+|++|+||++|+.++|.+++
T Consensus 293 dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~ 372 (489)
T KOG0156|consen 293 DLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE 372 (489)
T ss_pred HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC
Confidence 6789999999999999999999999999999999999999 555999999999999999999999999999999999999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCC-CCCCCCCCCccccCCCCCccccHHHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE-GKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVT 159 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~-~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 159 (199)
|+.++||.|||||.|+++.|++|+||++|+||++|+||||++++ .+. ....++|||.|+|+|+|..+|++++.++++
T Consensus 373 d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~~--~~~~~iPFG~GRR~CpG~~La~~~l~l~la 450 (489)
T KOG0156|consen 373 DTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGKG--LDFKLIPFGSGRRICPGEGLARAELFLFLA 450 (489)
T ss_pred CeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCccccC--CceEecCCCCCcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 333 367899999999999999999999999999
Q ss_pred HHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEec
Q psy10387 160 TFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRER 198 (199)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 198 (199)
.++++|+|+..++ .++..........+.++.....+|
T Consensus 451 ~llq~F~w~~~~~--~~d~~e~~~~~~~~~pl~~~~~~r 487 (489)
T KOG0156|consen 451 NLLQRFDWKLPGG--KVDMEEAGLTLKKKKPLKAVPVPR 487 (489)
T ss_pred HHHheeeeecCCC--CCCCcccccceecCCcceeeeecC
Confidence 9999999999877 233333323333445666666555
No 4
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=3.3e-51 Score=348.76 Aligned_cols=197 Identities=29% Similarity=0.548 Sum_probs=173.6
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++|+|++||++|+|+++||+++++ +..++.+++.++||++|||+|++|++|++++..+|.+.+
T Consensus 300 ~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~ 379 (503)
T PLN02394 300 NINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLE 379 (503)
T ss_pred HHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCC
Confidence 4568999999999999999999999999999999999998 566788899999999999999999999999877899999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCC--CCCCCCccccCCCCCccccHHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKF--DKSNPNAINFGIGRRSCAGDFVAQNVMFLYV 158 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l 158 (199)
|++++|+.||+||.|.++.+++||||++|+||++|+||||+++++.. .....+++|||.|+|+|+|+++|.+|+++++
T Consensus 380 d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~l 459 (503)
T PLN02394 380 DAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVL 459 (503)
T ss_pred CcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754321 1125679999999999999999999999999
Q ss_pred HHHHHhceeeeCCCCCCCCCCccC-Ccee-cCcceeEEEEec
Q psy10387 159 TTFFQKYSVHRDPNNPDLSTKAMS-GFTT-APQPFKAIIRER 198 (199)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~-~~~~-~~~~~~v~~~~R 198 (199)
|.++++|++++.++.+..+..... ++.. .|.++.+++.+|
T Consensus 460 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 501 (503)
T PLN02394 460 GRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPR 501 (503)
T ss_pred HHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecC
Confidence 999999999987765323333323 2444 788999999998
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1e-50 Score=344.06 Aligned_cols=191 Identities=32% Similarity=0.597 Sum_probs=172.2
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ ...++.+++.+|||++|+|+|++|++|+++..++|.+.+
T Consensus 290 ~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~ 369 (482)
T PTZ00404 290 DFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSN 369 (482)
T ss_pred HHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccC
Confidence 4689999999999999999999999999999999999998 566889999999999999999999999999767999999
Q ss_pred Ccee-ccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHHH
Q psy10387 81 NTTF-YDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVT 159 (199)
Q Consensus 81 d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 159 (199)
|+++ +|+.||||+.|.++.+++||||++||||++|+||||++.. .+..|+|||.|+|.|+|+++|++|++++++
T Consensus 370 d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la 444 (482)
T PTZ00404 370 DIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFS 444 (482)
T ss_pred CEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999742 256899999999999999999999999999
Q ss_pred HHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEec
Q psy10387 160 TFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRER 198 (199)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 198 (199)
.++++|+++..++++ .......+++..|.++.+.+++|
T Consensus 445 ~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~R 482 (482)
T PTZ00404 445 NIILNFKLKSIDGKK-IDETEEYGLTLKPNKFKVLLEKR 482 (482)
T ss_pred HHHHhcEEecCCCCC-CCcccccceeecCCCceeeeecC
Confidence 999999999876543 12222345666788999999887
No 6
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=5.5e-50 Score=340.31 Aligned_cols=191 Identities=20% Similarity=0.359 Sum_probs=167.4
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC------CCCCCccccccChhHHHHHHHHhcCCCCCCCCcc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG------SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVP 75 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~------~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~ 75 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ +..++.+++.++||++|+|+|++|++|+++. .+
T Consensus 286 ~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~ 364 (490)
T PLN02500 286 SLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LH 364 (490)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-ee
Confidence 5789999999999999999999999999999999999863 3457889999999999999999999999997 68
Q ss_pred eecccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCC------CCCCCccccCCCCCccccHHH
Q psy10387 76 HCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFD------KSNPNAINFGIGRRSCAGDFV 149 (199)
Q Consensus 76 r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~ 149 (199)
|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++++... ..+..|+|||+|+|.|+|+++
T Consensus 365 R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~ 444 (490)
T PLN02500 365 RKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSEL 444 (490)
T ss_pred eEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999997543211 125689999999999999999
Q ss_pred HHHHHHHHHHHHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEe
Q psy10387 150 AQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRE 197 (199)
Q Consensus 150 A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 197 (199)
|.+|++++++.++++|+|++.++.. .. . ...+..+.++++++++
T Consensus 445 A~~el~~~la~ll~~f~~~~~~~~~--~~-~-~~~~~~~~~l~~~~~~ 488 (490)
T PLN02500 445 AKLEMAVFIHHLVLNFNWELAEADQ--AF-A-FPFVDFPKGLPIRVRR 488 (490)
T ss_pred HHHHHHHHHHHHHhccEEEEcCCCc--ce-e-cccccCCCCceEEEEe
Confidence 9999999999999999999977643 11 1 2234556788888875
No 7
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=7.5e-50 Score=340.13 Aligned_cols=197 Identities=22% Similarity=0.447 Sum_probs=172.7
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ ...++.+++.+|||++|+|+|++|++|++++.+.|.+.+
T Consensus 295 ~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~ 374 (499)
T PLN03234 295 DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIA 374 (499)
T ss_pred HHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCC
Confidence 5789999999999999999999999999999999999998 566889999999999999999999999999756899999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCC-CCCCCCCCCCcCCCCCCC--CCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEGKF--DKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
|++++|+.||||+.|.++.+.+||||++| +||++|+||||+++.... ......++|||+|+|.|+|+++|++|++++
T Consensus 375 d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 454 (499)
T PLN03234 375 DAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIP 454 (499)
T ss_pred CeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999 899999999999764431 223567999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCC--CCCCCccCCceec-CcceeEEEEec
Q psy10387 158 VTTFFQKYSVHRDPNNP--DLSTKAMSGFTTA-PQPFKAIIRER 198 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~R 198 (199)
++.|+++|+|++.++.. ........++... +..+.+.+++|
T Consensus 455 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 455 FANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred HHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 99999999999987632 2233334566664 45778888776
No 8
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.7e-50 Score=336.99 Aligned_cols=194 Identities=29% Similarity=0.601 Sum_probs=170.5
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
.+++||+|||+.+++|++++|++||++|+|+++|++++++ +..++.+++.++|||+|||+|++|++|+++..++|.+.+
T Consensus 269 ~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~ 348 (463)
T PF00067_consen 269 TLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATE 348 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4678999999999999999999999999999999999997 456888999999999999999999999999668999999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTT 160 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ 160 (199)
|++++|+.||||+.|.++.+.+|+||++|+||++|+|+||++.+.........|+|||.|+|.|+|+++|++|++++++.
T Consensus 349 d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 428 (463)
T PF00067_consen 349 DVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAK 428 (463)
T ss_dssp SEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987622223778999999999999999999999999999
Q ss_pred HHHhceeeeCCCCCCCCCCccCCceecCcceeEEE
Q psy10387 161 FFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAII 195 (199)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 195 (199)
++++|++++.++..........+++.+|.++.|+|
T Consensus 429 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (463)
T PF00067_consen 429 LLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF 463 (463)
T ss_dssp HHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred HHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence 99999999977654222222336788888888875
No 9
>KOG0157|consensus
Probab=100.00 E-value=9.7e-50 Score=338.59 Aligned_cols=193 Identities=27% Similarity=0.511 Sum_probs=169.7
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCC--CccccccChhHHHHHHHHhcCCCCCCCCcceecc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP--TLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCM 79 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~--~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~ 79 (199)
+|++||+|||+++++|+++.|+.||++|+|+++|++++++++.. +....++|+|+++||+|+||+||++|+ ..|.+.
T Consensus 298 tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~ 376 (497)
T KOG0157|consen 298 TFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKAT 376 (497)
T ss_pred HheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccC
Confidence 68999999999999999999999999999999999999983322 222333599999999999999999996 999999
Q ss_pred cCceec-cEEeCCCCEEEeChhhhhcCCCCCC-CCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 80 ENTTFY-DYFIPKDTMIFISLWSLFHDEKNFE-EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 80 ~d~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
+|+.++ |+.||||+.|+++.+++|||+++|+ ||++|||+||+++......++++|+|||+|+|.|+|++||++|+|++
T Consensus 377 ~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~ 456 (497)
T KOG0157|consen 377 KDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVV 456 (497)
T ss_pred CCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHH
Confidence 999995 8999999999999999999999995 99999999999765543334789999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 158 VTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
+++++++|+|++..+.. .......+..+ .+++|++++|
T Consensus 457 l~~ll~~f~~~~~~~~~---~~~~~~~~l~~~~gl~v~~~~r 495 (497)
T KOG0157|consen 457 LAHLLRRFRIEPVGGDK---PKPVPELTLRPKNGLKVKLRPR 495 (497)
T ss_pred HHHHHHheEEEecCCCC---ceeeeEEEEEecCCeEEEEEeC
Confidence 99999999999988753 34445666665 5999999998
No 10
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.2e-49 Score=340.18 Aligned_cols=196 Identities=28% Similarity=0.478 Sum_probs=168.3
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ ++.++.+++.+++|++|||+|++|++|++|+ ..|.+.+
T Consensus 311 ~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~-~~r~~~~ 389 (516)
T PLN02183 311 DVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPL-LLHETAE 389 (516)
T ss_pred HHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccc-eeeeccC
Confidence 4689999999999999999999999999999999999998 6668899999999999999999999999997 6699999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCC-CCCCCCccccCCCCCccccHHHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKF-DKSNPNAINFGIGRRSCAGDFVAQNVMFLYVT 159 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 159 (199)
|++++|+.||||+.|.++.+++||||++|+||++|+||||++++... ......|+|||+|+|+|+|+++|++|+++++|
T Consensus 390 d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la 469 (516)
T PLN02183 390 DAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVA 469 (516)
T ss_pred ceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754421 12256899999999999999999999999999
Q ss_pred HHHHhceeeeCCCCCCCCCC--ccCCcee-cCcceeEEEEec
Q psy10387 160 TFFQKYSVHRDPNNPDLSTK--AMSGFTT-APQPFKAIIRER 198 (199)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~--~~~~~~~-~~~~~~v~~~~R 198 (199)
.++++|+++..++....... ...+.+. .+.++.+.+++|
T Consensus 470 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 470 HLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred HHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence 99999999987764211122 1224443 234666666666
No 11
>KOG0159|consensus
Probab=100.00 E-value=3.7e-50 Score=330.34 Aligned_cols=193 Identities=24% Similarity=0.452 Sum_probs=176.6
Q ss_pred CcEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC--CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceec
Q psy10387 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG--SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCC 78 (199)
Q Consensus 1 ~~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~--~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~ 78 (199)
+++++||.|||+.++.|+||+|++||+.|++|++|+.+++. +..++.+++.++|||+|||||++|+||.+|. ..|+.
T Consensus 322 ~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l 400 (519)
T KOG0159|consen 322 MDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVL 400 (519)
T ss_pred HHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-ccccc
Confidence 46889999999999999999999999999999999999998 4668889999999999999999999999995 89999
Q ss_pred ccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHH
Q psy10387 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYV 158 (199)
Q Consensus 79 ~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l 158 (199)
.+|..++||.|||||.|.+..+.+.+||++|++|++|+|||||+++.+.. ++..++|||.|+|+|+|++||.+|+.+++
T Consensus 401 ~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~-~pF~~LPFGfG~R~C~GRRiAElEl~llL 479 (519)
T KOG0159|consen 401 PKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTI-HPFASLPFGFGPRMCLGRRIAELELHLLL 479 (519)
T ss_pred chhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCCC-CCceecCCCCCccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999874333 38899999999999999999999999999
Q ss_pred HHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 159 TTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
+.++++|+++...+. +......++..| .++.+++++|
T Consensus 480 arllr~f~V~~~~~~---pv~~~~~~il~P~~~l~f~f~~r 517 (519)
T KOG0159|consen 480 ARLLRNFKVEFLHEE---PVEYVYRFILVPNRPLRFKFRPR 517 (519)
T ss_pred HHHHHhcceeecCCC---CccceeEEEEcCCCCcceeeeeC
Confidence 999999999998764 456666777777 4889998876
No 12
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=2.1e-49 Score=337.30 Aligned_cols=189 Identities=19% Similarity=0.332 Sum_probs=163.1
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccC
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMEN 81 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d 81 (199)
++++||+|||+++++|++++|+.||++|+|+++||++++ +.+++.+|||++|+++|+||++|++|+ ..|.+.+|
T Consensus 308 ~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~-----~~~dl~~L~Yl~avi~EtLRl~P~vp~-~~r~~~~d 381 (500)
T PLN02169 308 SLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF-----DNEDLEKLVYLHAALSESMRLYPPLPF-NHKAPAKP 381 (500)
T ss_pred HHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC-----CHHHHhcCHHHHHHHHHHHhcCCCCCc-CceecCCC
Confidence 578999999999999999999999999999999999864 568899999999999999999999997 56666555
Q ss_pred ce-eccEEeCCCCEEEeChhhhhcCCCCC-CCCCCCCCCCcCCCCCCCC-CCCCCccccCCCCCccccHHHHHHHHHHHH
Q psy10387 82 TT-FYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEGKFD-KSNPNAINFGIGRRSCAGDFVAQNVMFLYV 158 (199)
Q Consensus 82 ~~-~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l 158 (199)
.+ ++|+.||||+.|+++.|++||||++| +||++|+||||+++++... ..+..|+|||+|+|+|+|+++|++|+++++
T Consensus 382 ~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~l 461 (500)
T PLN02169 382 DVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVA 461 (500)
T ss_pred CCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 45 59999999999999999999999999 8999999999997654322 125689999999999999999999999999
Q ss_pred HHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEecC
Q psy10387 159 TTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRERY 199 (199)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R~ 199 (199)
+.|+++|+|+..++.. ......++..| .++++++++|.
T Consensus 462 a~ll~~f~~~~~~~~~---~~~~~~~~l~~~~gl~l~l~~~~ 500 (500)
T PLN02169 462 LEIIKNYDFKVIEGHK---IEAIPSILLRMKHGLKVTVTKKI 500 (500)
T ss_pred HHHHHHCEEEEcCCCC---cccccceEEecCCCEEEEEEeCC
Confidence 9999999999976432 22233455545 58999999883
No 13
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.6e-49 Score=338.20 Aligned_cols=196 Identities=27% Similarity=0.492 Sum_probs=170.4
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC--CCCCccccccChhHHHHHHHHhcCCCCCCCCcceecc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS--RRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCM 79 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~ 79 (199)
++++||+|||+++++|++++|++||++|+|+++||++++++ +.++.+++.+|||++|||+|++|++|++++.++|.+.
T Consensus 313 ~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~ 392 (519)
T PLN00168 313 EFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAA 392 (519)
T ss_pred HHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCC
Confidence 46899999999999999999999999999999999999973 5688999999999999999999999999877789999
Q ss_pred cCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCC----C-CCCCCCccccCCCCCccccHHHHHHHH
Q psy10387 80 ENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGK----F-DKSNPNAINFGIGRRSCAGDFVAQNVM 154 (199)
Q Consensus 80 ~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~----~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~ 154 (199)
+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+.. . ...+..++|||.|+|+|+|++||.+|+
T Consensus 393 ~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~ 472 (519)
T PLN00168 393 EDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHL 472 (519)
T ss_pred CCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999974321 1 112457999999999999999999999
Q ss_pred HHHHHHHHHhceeeeCCCCCCCCCCccCCce-ecCcceeEEEEec
Q psy10387 155 FLYVTTFFQKYSVHRDPNNPDLSTKAMSGFT-TAPQPFKAIIRER 198 (199)
Q Consensus 155 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~R 198 (199)
+++++.|+++|+|++.++.. .+.....+++ ..+.++++++++|
T Consensus 473 ~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~R 516 (519)
T PLN00168 473 EYFVANMVREFEWKEVPGDE-VDFAEKREFTTVMAKPLRARLVPR 516 (519)
T ss_pred HHHHHHHHHHccceeCCCCc-CChhhhceeEEeecCCcEEEEEec
Confidence 99999999999999976542 2222222333 3456899999887
No 14
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=4.5e-49 Score=337.18 Aligned_cols=197 Identities=27% Similarity=0.421 Sum_probs=173.9
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+.+++|++++|++||++|+|+++||+++++ ++.++.+++.++||++|+|+|++|++|+++....|.+.+
T Consensus 321 ~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~ 400 (534)
T PLN03018 321 EFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQ 400 (534)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCC
Confidence 4689999999999999999999999999999999999998 567888999999999999999999999999766899999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCC-----CCCCCccccCCCCCccccHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFD-----KSNPNAINFGIGRRSCAGDFVAQNVMF 155 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~~A~~~~~ 155 (199)
|++++|+.||||+.|.++.+++|+||++|+||++|+||||+++++... ..+..++|||+|+|.|+|+++|.+|++
T Consensus 401 d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~ 480 (534)
T PLN03018 401 DTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMV 480 (534)
T ss_pred CeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999997543211 125689999999999999999999999
Q ss_pred HHHHHHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEec
Q psy10387 156 LYVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRER 198 (199)
Q Consensus 156 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 198 (199)
++++.|+++|+|++.++....+.....+.+..|.++.+.+++|
T Consensus 481 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R 523 (534)
T PLN03018 481 MMLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPLLLSVEPR 523 (534)
T ss_pred HHHHHHHHhceEEeCCCCCCCCccccccceecCCCeEEEEEec
Confidence 9999999999999876532223333335566678999999998
No 15
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=3.3e-49 Score=336.44 Aligned_cols=172 Identities=28% Similarity=0.582 Sum_probs=158.3
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC---CCCCccccccChhHHHHHHHHhcCCCCCCCCcceec
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS---RRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCC 78 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~ 78 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++. ..++.+++.++||++|+|+|++|++|+++..++|.+
T Consensus 296 ~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~ 375 (502)
T PLN02966 296 DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRAC 375 (502)
T ss_pred HHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCccc
Confidence 57899999999999999999999999999999999999872 357889999999999999999999999997678999
Q ss_pred ccCceeccEEeCCCCEEEeChhhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 79 MENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 79 ~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
.+|++++|+.|||||.|.++.+++||||++| |||++|+||||++++.+....+..|+|||+|+|+|+|++||.+|++++
T Consensus 376 ~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~ 455 (502)
T PLN02966 376 IQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVP 455 (502)
T ss_pred CCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999764432223568999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCC
Q psy10387 158 VTTFFQKYSVHRDPNN 173 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~ 173 (199)
++.++++|+|++.++.
T Consensus 456 la~ll~~f~i~~~~~~ 471 (502)
T PLN02966 456 YANLLLNFNFKLPNGM 471 (502)
T ss_pred HHHHHHhceeeCCCCC
Confidence 9999999999988764
No 16
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=4.2e-49 Score=335.75 Aligned_cols=196 Identities=29% Similarity=0.540 Sum_probs=172.9
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ +..++.+++.++||++|+|+|++|++|+++++++|.+.+
T Consensus 296 ~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 375 (504)
T PLN00110 296 NLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQ 375 (504)
T ss_pred hhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCC
Confidence 5789999999999999999999999999999999999998 567889999999999999999999999999778999999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCC---CCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDK---SNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~---~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
|++++|+.||+|+.|.++.+++|+||++|+||++|+||||++.+..... ....++|||.|+|.|+|+++|.+|++++
T Consensus 376 d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 455 (504)
T PLN00110 376 ACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYI 455 (504)
T ss_pred CeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999965432111 1247999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 158 VTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
++.|+++|+|++.++.+ .......+++..| .++.+.+++|
T Consensus 456 la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r 496 (504)
T PLN00110 456 LGTLVHSFDWKLPDGVE-LNMDEAFGLALQKAVPLSAMVTPR 496 (504)
T ss_pred HHHHHHhceeecCCCCc-cCcccccccccccCCCceEeeccC
Confidence 99999999999877642 2222234555544 6899999887
No 17
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=7.4e-49 Score=340.54 Aligned_cols=194 Identities=27% Similarity=0.508 Sum_probs=170.7
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccC
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMEN 81 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d 81 (199)
++++||+|||+.+++|++++|++||++|+||++|+++++++..++.+++.+||||+|||+|+||++|+++. ..|.+.+|
T Consensus 398 ~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d 476 (633)
T PLN02738 398 TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLEN 476 (633)
T ss_pred HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccC
Confidence 46899999999999999999999999999999999999987778999999999999999999999999997 67899999
Q ss_pred ceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCC--CCCCCCCccccCCCCCccccHHHHHHHHHHHHH
Q psy10387 82 TTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGK--FDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVT 159 (199)
Q Consensus 82 ~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 159 (199)
.+++|+.||+||.|.++.+.+||||++||||++|+||||+.+... .......++|||.|+|.|+|++||++|++++++
T Consensus 477 ~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA 556 (633)
T PLN02738 477 DMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATA 556 (633)
T ss_pred ceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999853221 112356899999999999999999999999999
Q ss_pred HHHHhceeeeCCCCCCCCCCccCCcee-cCcceeEEEEec
Q psy10387 160 TFFQKYSVHRDPNNPDLSTKAMSGFTT-APQPFKAIIRER 198 (199)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~R 198 (199)
.|+++|+|++.++.. +.....+.+. ++.++++.+++|
T Consensus 557 ~Llr~F~~el~~~~~--~~~~~~~~~~~p~~~l~v~l~~R 594 (633)
T PLN02738 557 MLVRRFDFQLAPGAP--PVKMTTGATIHTTEGLKMTVTRR 594 (633)
T ss_pred HHHHhCeeEeCCCCC--CcccccceEEeeCCCcEEEEEEC
Confidence 999999999987643 2222223344 456899999988
No 18
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=4.9e-49 Score=336.38 Aligned_cols=190 Identities=23% Similarity=0.413 Sum_probs=170.0
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccC
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMEN 81 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d 81 (199)
++++||+|||+++++|++++|++||++|+|+++|+++++++..++.+++.++||++|||+|++|++|+++. ++|.+.+|
T Consensus 323 ~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d 401 (516)
T PLN02290 323 TFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFED 401 (516)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCC
Confidence 46899999999999999999999999999999999999996688999999999999999999999999995 89999999
Q ss_pred ceeccEEeCCCCEEEeChhhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHHHH
Q psy10387 82 TTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTT 160 (199)
Q Consensus 82 ~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ 160 (199)
++++|+.||||+.|+++.+++||||++| +||++|+||||++.+. . ....|+|||.|+|.|+|+++|++|++++++.
T Consensus 402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~--~-~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ 478 (516)
T PLN02290 402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF--A-PGRHFIPFAAGPRNCIGQAFAMMEAKIILAM 478 (516)
T ss_pred eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC--C-CCCeEecCCCCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 8999999999995432 1 1457999999999999999999999999999
Q ss_pred HHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 161 FFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
|+++|++++.++.. ......++..| .++++++++|
T Consensus 479 ll~~f~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~ 514 (516)
T PLN02290 479 LISKFSFTISDNYR---HAPVVVLTIKPKYGVQVCLKPL 514 (516)
T ss_pred HHHhceEeeCCCcc---cCccceeeecCCCCCeEEEEeC
Confidence 99999999876532 12223456666 4789999987
No 19
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=1.3e-48 Score=329.96 Aligned_cols=194 Identities=26% Similarity=0.433 Sum_probs=172.3
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccC
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMEN 81 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d 81 (199)
++++||+|||+++++|++++|++||++|+|+++||++++++..++.+++.++||++|+++|++|++|+++...+|.+.+|
T Consensus 269 ~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d 348 (466)
T PLN02655 269 EPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHED 348 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCC
Confidence 56799999999999999999999999999999999999985558999999999999999999999999997668999999
Q ss_pred ceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHHHHH
Q psy10387 82 TTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTF 161 (199)
Q Consensus 82 ~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~l 161 (199)
++++|+.||||+.|+++.+++||||++|+||++|+|+||++.+..... ...++|||+|+|.|+|+++|..+++++++.|
T Consensus 349 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~-~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~l 427 (466)
T PLN02655 349 TTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESAD-MYKTMAFGAGKRVCAGSLQAMLIACMAIARL 427 (466)
T ss_pred cccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccCC-cccccCCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999976533222 4689999999999999999999999999999
Q ss_pred HHhceeeeCCCCCCCCCCccCCcee-cCcceeEEEEec
Q psy10387 162 FQKYSVHRDPNNPDLSTKAMSGFTT-APQPFKAIIRER 198 (199)
Q Consensus 162 l~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~R 198 (199)
+++|++++.++.. +.....+++. .+.++.+++.+|
T Consensus 428 l~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r 463 (466)
T PLN02655 428 VQEFEWRLREGDE--EKEDTVQLTTQKLHPLHAHLKPR 463 (466)
T ss_pred HHHeEEEeCCCCc--cccchhheeEeecCCcEEEEeec
Confidence 9999999976642 1222345555 447999999887
No 20
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=7.6e-49 Score=335.19 Aligned_cols=193 Identities=22% Similarity=0.302 Sum_probs=163.9
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC---------------------CCCCccccccChhHHHHH
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS---------------------RRPTLDDKHHLHYVQAII 60 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~---------------------~~~~~~~~~~~~~l~a~i 60 (199)
++++||+|||+++++|++|+|++||++|+|+++|+++++++ ..++.+++.++||++|||
T Consensus 299 ~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi 378 (516)
T PLN03195 299 NFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVI 378 (516)
T ss_pred HHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHH
Confidence 57899999999999999999999999999999999987642 347888999999999999
Q ss_pred HHHhcCCCCCCCCcceecccCcee-ccEEeCCCCEEEeChhhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCCccccC
Q psy10387 61 HEVFRINTIAPITVPHCCMENTTF-YDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEGKFDKSNPNAINFG 138 (199)
Q Consensus 61 ~E~lRl~~~~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg 138 (199)
+|+||++|++|. ..|.+.+|..+ +|+.||||+.|.++.+++||||++| +||++|+||||++++......+..|+|||
T Consensus 379 ~EtLRl~p~~p~-~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG 457 (516)
T PLN03195 379 TETLRLYPAVPQ-DPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQ 457 (516)
T ss_pred HHHhhcCCCCcc-hhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccC
Confidence 999999999996 56666666555 8999999999999999999999999 99999999999964321122356799999
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHhceeeeCCCCCCCCCCccCCcee-cCcceeEEEEec
Q psy10387 139 IGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSGFTT-APQPFKAIIRER 198 (199)
Q Consensus 139 ~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~R 198 (199)
+|+|.|+|+++|++|++++++.++++|++++.++.+ .......+. ++.++.|++++|
T Consensus 458 ~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~r 515 (516)
T PLN03195 458 AGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP---VKYRMMTILSMANGLKVTVSRR 515 (516)
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc---ceeeeeeEEecCCCEEEEEEeC
Confidence 999999999999999999999999999999876532 222223333 446899999887
No 21
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=3e-48 Score=331.35 Aligned_cols=197 Identities=26% Similarity=0.528 Sum_probs=171.8
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ ++.++.+++.++||++|+|+|++|++|++++.++|.+.+
T Consensus 303 ~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~ 382 (514)
T PLN03112 303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLR 382 (514)
T ss_pred HHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCC
Confidence 5789999999999999999999999999999999999998 567899999999999999999999999999767899999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCC---CC-CCCCCccccCCCCCccccHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGK---FD-KSNPNAINFGIGRRSCAGDFVAQNVMFL 156 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~---~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~ 156 (199)
|++++|+.||||+.|.++.+++|+||++|+||++|+||||+..++. .. ..+..++|||.|+|.|+|+++|.+|+++
T Consensus 383 d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~ 462 (514)
T PLN03112 383 ATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLM 462 (514)
T ss_pred CeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998764321 11 1245799999999999999999999999
Q ss_pred HHHHHHHhceeeeCCCCC--CCCCCccCCceec-CcceeEEEEec
Q psy10387 157 YVTTFFQKYSVHRDPNNP--DLSTKAMSGFTTA-PQPFKAIIRER 198 (199)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~R 198 (199)
+++.++++|+|++.++.. ........++..+ ++++.+++++|
T Consensus 463 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 507 (514)
T PLN03112 463 ALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPR 507 (514)
T ss_pred HHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecC
Confidence 999999999999875432 1222223355554 56999999998
No 22
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=3.5e-48 Score=331.18 Aligned_cols=197 Identities=29% Similarity=0.524 Sum_probs=170.4
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceeccc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCME 80 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~ 80 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ +..++.+++.++||++|+|+|++|++|+++..++|.+.+
T Consensus 304 ~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~ 383 (517)
T PLN02687 304 NLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAE 383 (517)
T ss_pred HHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCC
Confidence 5789999999999999999999999999999999999988 667889999999999999999999999999768999999
Q ss_pred CceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCC----CCCCCCccccCCCCCccccHHHHHHHHHH
Q psy10387 81 NTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKF----DKSNPNAINFGIGRRSCAGDFVAQNVMFL 156 (199)
Q Consensus 81 d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~ 156 (199)
|++++|+.||+|+.|.++.+.+|+||++|+||++|+||||++++... ...+..++|||+|+|.|+|+++|.+|+++
T Consensus 384 d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~ 463 (517)
T PLN02687 384 ECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTL 463 (517)
T ss_pred CeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754321 11245799999999999999999999999
Q ss_pred HHHHHHHhceeeeCCCCCCCCC--CccCCceecC-cceeEEEEec
Q psy10387 157 YVTTFFQKYSVHRDPNNPDLST--KAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~~~-~~~~v~~~~R 198 (199)
+++.|+++|++++.++....+. .....+...+ .++.+.+++|
T Consensus 464 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 508 (517)
T PLN02687 464 LTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPR 508 (517)
T ss_pred HHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccC
Confidence 9999999999999765421122 2222334333 4788888777
No 23
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=3.3e-48 Score=329.92 Aligned_cols=195 Identities=18% Similarity=0.294 Sum_probs=168.3
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCC--CCCCccccccChhHHHHHHHHhcCCCCCCCCcceecc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS--RRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCM 79 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~ 79 (199)
++++||+|||+++++|++|+|++||++|+|+++|++++++. ..++.+++.+|||++|+|+|++|++|+++. ..|.+.
T Consensus 300 ~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~-~~r~~~ 378 (502)
T PLN02426 300 SFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQF-DSKFAA 378 (502)
T ss_pred HHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCC-cceeec
Confidence 56899999999999999999999999999999999999872 367899999999999999999999999996 568988
Q ss_pred cCcee-ccEEeCCCCEEEeChhhhhcCCCCC-CCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 80 ENTTF-YDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 80 ~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
+|.++ +|+.||+|+.|.++.+++||||++| +||++|+||||++++......+..++|||+|+|.|+|+++|.+|++++
T Consensus 379 ~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~ 458 (502)
T PLN02426 379 EDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSV 458 (502)
T ss_pred cCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHH
Confidence 88777 8999999999999999999999999 999999999999743211122557999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 158 VTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
++.++++|+++..++.. .......+++..| .++.|++++|
T Consensus 459 la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~gl~v~~~~r 499 (502)
T PLN02426 459 AVAVVRRFDIEVVGRSN-RAPRFAPGLTATVRGGLPVRVRER 499 (502)
T ss_pred HHHHHHHceEEEecCCC-CCCcccceeEEecCCCEEEEEEEc
Confidence 99999999999865432 1122333555555 5899999987
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=6.9e-48 Score=325.38 Aligned_cols=188 Identities=22% Similarity=0.301 Sum_probs=164.8
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC----CCCCCccccccChhHHHHHHHHhcCCCCCCCCccee
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG----SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHC 77 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~ 77 (199)
++++||+|||+++++|++++|++||++|+|+++|++++++ +..++.+++.++||++|+|+|++|++|+++. ..|.
T Consensus 271 ~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~ 349 (463)
T PLN02774 271 TILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRK 349 (463)
T ss_pred HHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccc
Confidence 5688999999999999999999999999999999999986 2457889999999999999999999999985 7799
Q ss_pred cccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 78 CMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 78 ~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
+.+|++++|+.||||+.|+++.+.+|+||++|+||++|+||||++++.. . ...++|||+|+|+|+|+++|.+|++++
T Consensus 350 ~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~--~-~~~~lpFG~G~r~C~G~~~A~~e~~~~ 426 (463)
T PLN02774 350 TTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE--S-HNYFFLFGGGTRLCPGKELGIVEISTF 426 (463)
T ss_pred cCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC--C-CccccCcCCCCCcCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999965422 1 236999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEe
Q psy10387 158 VTTFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRE 197 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 197 (199)
++.|+++|+|++.++.. ... .....++.++++++++
T Consensus 427 la~Ll~~f~~~~~~~~~---~~~-~~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 427 LHYFVTRYRWEEVGGDK---LMK-FPRVEAPNGLHIRVSP 462 (463)
T ss_pred HHHHHHhceEEECCCCc---ccc-CCCCCCCCCceEEeee
Confidence 99999999999977642 111 1223345688888763
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=1.6e-47 Score=325.11 Aligned_cols=195 Identities=23% Similarity=0.360 Sum_probs=169.9
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccC
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMEN 81 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d 81 (199)
++++||+|||+++++|++++|++||++|+|+++|+++++++..++.+++.+|||++|||+|++|++|+++....|.+.+|
T Consensus 285 ~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~ 364 (489)
T PLN02936 285 SMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVED 364 (489)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCc
Confidence 56889999999999999999999999999999999999986667888999999999999999999999998777777888
Q ss_pred ceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCC--CCCCCCccccCCCCCccccHHHHHHHHHHHHH
Q psy10387 82 TTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKF--DKSNPNAINFGIGRRSCAGDFVAQNVMFLYVT 159 (199)
Q Consensus 82 ~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 159 (199)
+.++|+.||+|+.|.++.+.+||||++|+||++|+||||++.+... ...+..++|||.|+|.|+|+++|+++++++++
T Consensus 365 ~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la 444 (489)
T PLN02936 365 VLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALA 444 (489)
T ss_pred cccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999654321 11245799999999999999999999999999
Q ss_pred HHHHhceeeeCCCCCCCCCCccCCcee-cCcceeEEEEecC
Q psy10387 160 TFFQKYSVHRDPNNPDLSTKAMSGFTT-APQPFKAIIRERY 199 (199)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~R~ 199 (199)
.|+++|+++++++++ .....+++. ++.++.|++++|+
T Consensus 445 ~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~R~ 482 (489)
T PLN02936 445 VLLQRLDLELVPDQD---IVMTTGATIHTTNGLYMTVSRRR 482 (489)
T ss_pred HHHHhCeEEecCCCc---cceecceEEeeCCCeEEEEEeee
Confidence 999999999987542 122223433 5579999999984
No 26
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=1.5e-47 Score=322.47 Aligned_cols=186 Identities=20% Similarity=0.309 Sum_probs=165.2
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC-----CCCCCccccccChhHHHHHHHHhcCCCCCCCCcce
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-----SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPH 76 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r 76 (199)
++++||+|||+.+++|++++|++||++|+|+++|++++.+ +..++.+++.++||++|||+|++|++|+++ .++|
T Consensus 258 ~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~-~~~R 336 (452)
T PLN03141 258 DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIIN-GVMR 336 (452)
T ss_pred HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcC-Ccce
Confidence 5788999999999999999999999999999999998763 345778889999999999999999999998 4789
Q ss_pred ecccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHH
Q psy10387 77 CCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFL 156 (199)
Q Consensus 77 ~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~ 156 (199)
.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++++.. +..|+|||+|+|.|+|+++|.+|+++
T Consensus 337 ~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~----~~~~~pFG~G~R~C~G~~lA~~el~~ 412 (452)
T PLN03141 337 KAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMN----NSSFTPFGGGQRLCPGLDLARLEASI 412 (452)
T ss_pred eecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCC----CCCCCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999975332 56899999999999999999999999
Q ss_pred HHHHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 157 YVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
+++.|+++|+|+..++.. .. ..+..| .+..|.+++|
T Consensus 413 ~la~ll~~f~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~ 449 (452)
T PLN03141 413 FLHHLVTRFRWVAEEDTI----VN--FPTVRMKRKLPIWVTRI 449 (452)
T ss_pred HHHHHHhcCeeecCCCCe----ee--cccccCCCCceEEEEeC
Confidence 999999999999865431 11 124444 5889999987
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.4e-46 Score=319.24 Aligned_cols=190 Identities=21% Similarity=0.312 Sum_probs=166.4
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCC-----CCCccccccChhHHHHHHHHhcCCCCCCCCcce
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSR-----RPTLDDKHHLHYVQAIIHEVFRINTIAPITVPH 76 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-----~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r 76 (199)
++++||+|||+++++|++++|++||++|+|+++|+++++++. .++.+++.++||++|+|+|++|++|+++. ..|
T Consensus 294 ~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R 372 (490)
T PLN02302 294 MYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFR 372 (490)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chh
Confidence 467899999999999999999999999999999999998631 26788999999999999999999999986 679
Q ss_pred ecccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHH
Q psy10387 77 CCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFL 156 (199)
Q Consensus 77 ~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~ 156 (199)
.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|+||++... .+..++|||+|+|.|+|+++|.+|+++
T Consensus 373 ~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~----~~~~~~pFG~G~r~C~G~~lA~~e~~~ 448 (490)
T PLN02302 373 EAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP----KAGTFLPFGLGSRLCPGNDLAKLEISI 448 (490)
T ss_pred cccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC----CCCCccCCCCCCcCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999996432 256899999999999999999999999
Q ss_pred HHHHHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEecC
Q psy10387 157 YVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRERY 199 (199)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 199 (199)
+++.++++|++++.++.. +... .....+..++.+++++|+
T Consensus 449 ~la~ll~~f~~~~~~~~~--~~~~-~~~~~p~~~~~~~~~~~~ 488 (490)
T PLN02302 449 FLHHFLLGYRLERLNPGC--KVMY-LPHPRPKDNCLARITKVA 488 (490)
T ss_pred HHHHHHhcCeeEEcCCCC--ccee-CCCCCCCCCceEEEEecc
Confidence 999999999999976532 2221 122333458899999874
No 28
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=2.6e-46 Score=315.83 Aligned_cols=188 Identities=19% Similarity=0.342 Sum_probs=165.1
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC----CCCCCccccccChhHHHHHHHHhcCCCCCCCCccee
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG----SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHC 77 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~ 77 (199)
++++||+|||+++++|++++|++||++|+|+++|++++.+ +..++.+++.+++|++|+|+|++|++|++++ ..|.
T Consensus 271 ~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~-~~R~ 349 (463)
T PLN02196 271 GVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSF-TFRE 349 (463)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-ccee
Confidence 5689999999999999999999999999999999999886 3457888999999999999999999999997 5699
Q ss_pred cccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 78 CMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 78 ~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
+.+|++++|+.||||+.|.++.+++|+||++|+||++|+||||++.. .+..++|||.|+|.|+|+++|++|++++
T Consensus 350 ~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~ 424 (463)
T PLN02196 350 AVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVL 424 (463)
T ss_pred eccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999632 2568999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCCCCCCCccCCceecCcceeEEEEec
Q psy10387 158 VTTFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAIIRER 198 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 198 (199)
++.|+++|+|++.+++. ... ......+..++.|+++.+
T Consensus 425 la~ll~~f~~~~~~~~~--~~~-~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 425 IHHLTTKYRWSIVGTSN--GIQ-YGPFALPQNGLPIALSRK 462 (463)
T ss_pred HHHHHHhcEEEEcCCCC--ceE-EcccccCCCCceEEEecC
Confidence 99999999999876542 222 222333445778888753
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=1.9e-45 Score=310.86 Aligned_cols=190 Identities=23% Similarity=0.346 Sum_probs=167.8
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC----CCCCCccccccChhHHHHHHHHhcCCCCCCCCccee
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG----SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHC 77 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~ 77 (199)
++++||+|||+.+++|++++|++||++|+++++|++++.+ +..++.+++.++||++|+++|++|++|+++. ..|.
T Consensus 274 ~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~ 352 (472)
T PLN02987 274 ALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRR 352 (472)
T ss_pred HHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-cccc
Confidence 4679999999999999999999999999999999999875 2456788899999999999999999999984 7899
Q ss_pred cccCceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHH
Q psy10387 78 CMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLY 157 (199)
Q Consensus 78 ~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 157 (199)
+.+|++++|+.||+|+.|.++.+.+|+||++|+||++|+||||++.+.... ....++|||+|+|.|+|+++|.+|++++
T Consensus 353 ~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~-~~~~~l~FG~G~r~C~G~~lA~~e~~~~ 431 (472)
T PLN02987 353 AMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTV-PSNVFTPFGGGPRLCPGYELARVALSVF 431 (472)
T ss_pred CCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCC-CCcceECCCCCCcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997543322 2467999999999999999999999999
Q ss_pred HHHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 158 VTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
++.|+++|++++.++.. ... ..+..| .++.+++++|
T Consensus 432 la~ll~~f~~~~~~~~~---~~~--~~~~~p~~~~~~~~~~r 468 (472)
T PLN02987 432 LHRLVTRFSWVPAEQDK---LVF--FPTTRTQKRYPINVKRR 468 (472)
T ss_pred HHHHHhceEEEECCCCc---eee--cccccCCCCceEEEEec
Confidence 99999999999976542 222 235555 5899999988
No 30
>KOG0684|consensus
Probab=100.00 E-value=1.5e-44 Score=291.62 Aligned_cols=194 Identities=23% Similarity=0.390 Sum_probs=172.0
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhC--CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecc
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG--SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCM 79 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~--~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~ 79 (199)
.+++||..|++.+..|++++|++|||+++.+++|+.+++| ...++.+.++++|.|+.||+|++||+||.+. +.|.+.
T Consensus 280 ~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~ 358 (486)
T KOG0684|consen 280 GLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVH 358 (486)
T ss_pred HHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhc
Confidence 3579999999999999999999999999999999999999 3448999999999999999999999998884 889999
Q ss_pred cCceecc----EEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCC----CCCCccccCCCCCccccHHHHH
Q psy10387 80 ENTTFYD----YFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDK----SNPNAINFGIGRRSCAGDFVAQ 151 (199)
Q Consensus 80 ~d~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~----~~~~~~~Fg~G~r~C~G~~~A~ 151 (199)
+|.++.+ |.||+|..|.++...+|+||++|+||+.|+|+||++++++..+ -.+.++|||+|.|.|||+.||.
T Consensus 359 ~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~ 438 (486)
T KOG0684|consen 359 EDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAY 438 (486)
T ss_pred cceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHH
Confidence 9999976 9999999999999999999999999999999999987765421 1345699999999999999999
Q ss_pred HHHHHHHHHHHHhceeeeCCCCCCCCCCccCCceecC-cceeEEEEec
Q psy10387 152 NVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRER 198 (199)
Q Consensus 152 ~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R 198 (199)
+|++.++..+|++||+++.++ +-++...... +..| .+++++.+.|
T Consensus 439 ~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~-v~~P~g~v~irYK~R 484 (486)
T KOG0684|consen 439 LEIKQFISLLLRHFDLELIDG-PFPEVDYSRM-VMQPEGDVRIRYKRR 484 (486)
T ss_pred HHHHHHHHHHHHHcceeecCC-CCCCCCHHHh-hcCCCCCceEEEeec
Confidence 999999999999999999986 3344544333 5555 6899999887
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.5e-40 Score=272.81 Aligned_cols=145 Identities=24% Similarity=0.459 Sum_probs=138.1
Q ss_pred cEeeecchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHhCCCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccC
Q psy10387 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMEN 81 (199)
Q Consensus 2 ~l~~ag~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d 81 (199)
.+++||+|||+++++|++|.|++||+.++++++|.+. +|++++++|++|++|+++. ..|.+++|
T Consensus 243 ~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~---------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d 306 (411)
T COG2124 243 TLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR---------------PLLEAVVEETLRLYPPVPL-ARRVATED 306 (411)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch---------------HHHHHHHHHHHHhCCchhc-cceeccCC
Confidence 4689999999999999999999999999999998763 7899999999999999997 99999999
Q ss_pred ceeccEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHHHHHHHHHHHHHHH
Q psy10387 82 TTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTF 161 (199)
Q Consensus 82 ~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~l 161 (199)
++++|+.||||+.|+++.+++||||++|+||++|||+||. ..++|||+|+|.|+|..||++|++++++.+
T Consensus 307 ~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~l 376 (411)
T COG2124 307 VELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAEL 376 (411)
T ss_pred EeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 379999999999999999999999999999
Q ss_pred HHhceeeeCCC
Q psy10387 162 FQKYSVHRDPN 172 (199)
Q Consensus 162 l~~f~~~~~~~ 172 (199)
+++|++....+
T Consensus 377 l~r~~~~~~~~ 387 (411)
T COG2124 377 LRRFPLLLLAE 387 (411)
T ss_pred HHhCchhhcCC
Confidence 99999888765
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=8.1e-39 Score=270.17 Aligned_cols=164 Identities=20% Similarity=0.328 Sum_probs=143.5
Q ss_pred ecchhHHHHHHHHHHHHHhChH-HHHHHHHHHHHHhC--CCCCCccccccChhHHHHHHHHhcCCCCCCCCcceecccCc
Q psy10387 6 AGYETLSSSMAFAVLYMILYPA-IQTKLHQELDEHLG--SRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMENT 82 (199)
Q Consensus 6 ag~~tt~~~~~~~l~~L~~~p~-~~~~l~~Ei~~~~~--~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~ 82 (199)
++++|++++++|++|+|++||+ +++|+++|++++++ +..++.+++.+|||++++|+|++|++|+++. ..|.+.+|+
T Consensus 283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~-~~r~a~~d~ 361 (480)
T PLN02648 283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF-QYGRAREDF 361 (480)
T ss_pred HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc-ccceecCCE
Confidence 4566677899999999999995 99999999999986 3568899999999999999999999999996 678899999
Q ss_pred eec----cEEeCCCCEEEeChhhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCcccc---------CCCCCccccHHH
Q psy10387 83 TFY----DYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINF---------GIGRRSCAGDFV 149 (199)
Q Consensus 83 ~~~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~ 149 (199)
+++ ||.||||+.|+++.+.+|+||++|+||++|+|+||++++... ...+++| |+|+|.|+|++|
T Consensus 362 ~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~ 438 (480)
T PLN02648 362 VIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDF 438 (480)
T ss_pred EEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHH
Confidence 996 799999999999999999999999999999999999753321 1233443 677899999999
Q ss_pred HHHHHHHHHHHHHHhce-eeeCCCC
Q psy10387 150 AQNVMFLYVTTFFQKYS-VHRDPNN 173 (199)
Q Consensus 150 A~~~~~~~l~~ll~~f~-~~~~~~~ 173 (199)
|++|++++++.|+++|+ |++.++.
T Consensus 439 A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 439 VVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred HHHHHHHHHHHHHHHhCEEeecCCc
Confidence 99999999999999998 9987654
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=65.09 E-value=5 Score=23.97 Aligned_cols=8 Identities=50% Similarity=0.991 Sum_probs=6.2
Q ss_pred CCCCcCCC
Q psy10387 116 KPERFLSP 123 (199)
Q Consensus 116 ~p~R~l~~ 123 (199)
||||||.-
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78899864
No 34
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=63.92 E-value=2.2 Score=32.23 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhcCCCCCCCCcceecccCceeccEEeCCCCEEEe
Q psy10387 54 HYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFI 97 (199)
Q Consensus 54 ~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~g~~v~~ 97 (199)
....|||.|+.-+..... +.=+..+|+.++|..||||+.+..
T Consensus 53 n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 53 NTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence 347788888887766542 333457899999999999999876
No 35
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=54.37 E-value=15 Score=21.83 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=18.0
Q ss_pred HHHHHHHhChHHHHHHHHHHHHH
Q psy10387 17 FAVLYMILYPAIQTKLHQELDEH 39 (199)
Q Consensus 17 ~~l~~L~~~p~~~~~l~~Ei~~~ 39 (199)
-++.+|.+||++.+++.+.=.+.
T Consensus 4 ~iV~YLv~nPevl~kl~~g~asL 26 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEGEASL 26 (57)
T ss_pred HHHHHHHHChHHHHHHHcCCeeE
Confidence 46789999999999999753333
No 36
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=46.89 E-value=18 Score=25.56 Aligned_cols=24 Identities=8% Similarity=0.317 Sum_probs=17.0
Q ss_pred CccccHHHHHHHHHHHHHHHHHhc
Q psy10387 142 RSCAGDFVAQNVMFLYVTTFFQKY 165 (199)
Q Consensus 142 r~C~G~~~A~~~~~~~l~~ll~~f 165 (199)
-.|.|+.||..++-.++..++..-
T Consensus 18 yN~~gKKFsE~QiN~FIs~lItsP 41 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITSP 41 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS-
T ss_pred ecccchHHHHHHHHHHHHHHhcCC
Confidence 489999999999999999998753
No 37
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=44.35 E-value=16 Score=23.58 Aligned_cols=21 Identities=14% Similarity=0.066 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhceeeeCCC
Q psy10387 152 NVMFLYVTTFFQKYSVHRDPN 172 (199)
Q Consensus 152 ~~~~~~l~~ll~~f~~~~~~~ 172 (199)
.-|+-++..+|+-|||.+++-
T Consensus 60 ~~IrdAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVPM 80 (84)
T ss_pred HHHHHHHHHHhccCCceeeec
Confidence 347888999999999999864
No 38
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=42.17 E-value=6 Score=33.31 Aligned_cols=20 Identities=30% Similarity=0.456 Sum_probs=16.3
Q ss_pred ccCceeccEEeCCCCEEEeC
Q psy10387 79 MENTTFYDYFIPKDTMIFIS 98 (199)
Q Consensus 79 ~~d~~~~g~~ip~g~~v~~~ 98 (199)
.+|+.++|..||+||.+...
T Consensus 279 le~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 279 LEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred cCceeeCCEEecCCCEEEEE
Confidence 45788889999999998764
No 39
>PF10264 Stork_head: Winged helix Storkhead-box1 domain; InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=39.48 E-value=69 Score=20.44 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhC--hHHHHHHHHHHHHHhC-CCCCCcccc
Q psy10387 11 LSSSMAFAVLYMILY--PAIQTKLHQELDEHLG-SRRPTLDDK 50 (199)
Q Consensus 11 t~~~~~~~l~~L~~~--p~~~~~l~~Ei~~~~~-~~~~~~~~~ 50 (199)
.+-+++|++..|.+. +.-++.|++.+.+.+. -..|+.+.+
T Consensus 12 L~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~l 54 (80)
T PF10264_consen 12 LPEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEVL 54 (80)
T ss_pred HHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHHH
Confidence 456789999998876 7888999999888776 334454443
No 40
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=36.57 E-value=24 Score=24.49 Aligned_cols=21 Identities=24% Similarity=0.151 Sum_probs=17.3
Q ss_pred ecccCceeccEEeCCCCEEEe
Q psy10387 77 CCMENTTFYDYFIPKDTMIFI 97 (199)
Q Consensus 77 ~~~~d~~~~g~~ip~g~~v~~ 97 (199)
.+++|..++|..||+|+.++.
T Consensus 72 I~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 72 IAPEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred ecCCCcccCCeeecceEEEEE
Confidence 345688999999999999954
No 41
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=35.39 E-value=57 Score=21.32 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHh
Q psy10387 13 SSMAFAVLYMILYPAIQTKLHQELDEHL 40 (199)
Q Consensus 13 ~~~~~~l~~L~~~p~~~~~l~~Ei~~~~ 40 (199)
.+++|.++..-..|+..+.+.+||+++-
T Consensus 54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 54 FTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 4566777777778999999999998863
No 42
>KOG3302|consensus
Probab=33.48 E-value=13 Score=27.95 Aligned_cols=57 Identities=19% Similarity=0.396 Sum_probs=33.3
Q ss_pred CCCCCCCcCCCCCCCCCCCCCccccCCCCCcccc-----------HHHHHHHHHHHHHHHHHhceeee
Q psy10387 113 SKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAG-----------DFVAQNVMFLYVTTFFQKYSVHR 169 (199)
Q Consensus 113 ~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G-----------~~~A~~~~~~~l~~ll~~f~~~~ 169 (199)
.+|+|.||-.---........-+-|+.|+=.|-| +++|+...++-...-+++|++.-
T Consensus 50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA~se~~ar~aark~aRilqkLgf~~~f~~fki~n 117 (200)
T KOG3302|consen 50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGAKSEDSARLAARKYARILQKLGFPVKFRDFKINN 117 (200)
T ss_pred cccCcccccEEEEEEcCCceEEEEecCCcEEEeccCCHHHHHHHHHHHHHHHHHcCCCceehheeeEE
Confidence 6789999842111111224456789999999996 34444444444444555565543
No 43
>KOG3506|consensus
Probab=32.73 E-value=21 Score=20.88 Aligned_cols=11 Identities=55% Similarity=1.038 Sum_probs=9.2
Q ss_pred cccCCCCCccc
Q psy10387 135 INFGIGRRSCA 145 (199)
Q Consensus 135 ~~Fg~G~r~C~ 145 (199)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 46999999885
No 44
>PRK06789 flagellar motor switch protein; Validated
Probab=31.08 E-value=56 Score=20.50 Aligned_cols=41 Identities=7% Similarity=0.020 Sum_probs=31.0
Q ss_pred HHHHHhcCCCCCCCCcceecccC--ceeccEEeCCCCEEEeCh
Q psy10387 59 IIHEVFRINTIAPITVPHCCMEN--TTFYDYFIPKDTMIFISL 99 (199)
Q Consensus 59 ~i~E~lRl~~~~~~~~~r~~~~d--~~~~g~~ip~g~~v~~~~ 99 (199)
-++|.+.+.+..-..+-|.+.++ +.++|..|-+|..|..+-
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~ 63 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG 63 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence 37888999887766566666554 556899999999988753
No 45
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=28.68 E-value=31 Score=26.33 Aligned_cols=20 Identities=25% Similarity=0.654 Sum_probs=17.3
Q ss_pred hhhhcCCCCCCCCCCCCCCC
Q psy10387 100 WSLFHDEKNFEEPSKFKPER 119 (199)
Q Consensus 100 ~~~~~d~~~~~~p~~f~p~R 119 (199)
+.-+.|+.+|.|...|+|.|
T Consensus 192 ~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 192 WPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCCcccccCccccCCCC
Confidence 34488999999999999988
No 46
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=25.95 E-value=46 Score=24.56 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=32.7
Q ss_pred CCCCCCCcCCCCCCCCCCCCCccccCCCCCccccH-H--HHHHHHHHHHHHHHHhceeee
Q psy10387 113 SKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGD-F--VAQNVMFLYVTTFFQKYSVHR 169 (199)
Q Consensus 113 ~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~-~--~A~~~~~~~l~~ll~~f~~~~ 169 (199)
-+|+|+||-.---....+....+-|+.|+=.|-|- . =|..-++. ++.+|++..+..
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitGaks~~~~~~a~~~-~~~~L~~~g~~~ 87 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITGAKSEEDAKLAARK-YARILQKLGFPV 87 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEecCCHHHHHHHHHH-HHHHHHHcCCCc
Confidence 47888888422111111245788999999999983 2 33333333 445566666554
No 47
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=25.45 E-value=70 Score=22.12 Aligned_cols=23 Identities=9% Similarity=0.037 Sum_probs=17.4
Q ss_pred CCccccHHHHHHHHHHHHHHHHH
Q psy10387 141 RRSCAGDFVAQNVMFLYVTTFFQ 163 (199)
Q Consensus 141 ~r~C~G~~~A~~~~~~~l~~ll~ 163 (199)
.|.|||..++..+...++..+-.
T Consensus 4 GH~Cpgl~~G~r~~~~a~~~l~~ 26 (131)
T PF02663_consen 4 GHLCPGLALGYRMAKYALEELGI 26 (131)
T ss_dssp SS--HHHHHHHHHHHHHHHHHTS
T ss_pred CCcCccHHHHHHHHHHHHHHcCC
Confidence 38999999999999988877743
No 48
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=25.14 E-value=16 Score=27.02 Aligned_cols=56 Identities=14% Similarity=0.344 Sum_probs=32.1
Q ss_pred CCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHH---HHHHHHHHHHHHHHHhceeee
Q psy10387 113 SKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDF---VAQNVMFLYVTTFFQKYSVHR 169 (199)
Q Consensus 113 ~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~---~A~~~~~~~l~~ll~~f~~~~ 169 (199)
-+|+|+||-.---....+..+.+-|+.|+=.|-|-. =|..-++. ++.+|++..+..
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGaks~~~a~~a~~~-~~~~L~~~g~~~ 87 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGAKSVEDLHRAVKE-IIKKLKDYGIKV 87 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEccCCHHHHHHHHHH-HHHHHHhcCCCc
Confidence 578899884221111112457889999999999862 23333333 344456555443
No 49
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=24.65 E-value=1e+02 Score=15.62 Aligned_cols=15 Identities=13% Similarity=0.399 Sum_probs=11.3
Q ss_pred ChHHHHHHHHHHHHH
Q psy10387 25 YPAIQTKLHQELDEH 39 (199)
Q Consensus 25 ~p~~~~~l~~Ei~~~ 39 (199)
.|.+..++|+||.+.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 478888899988764
No 50
>KOG2376|consensus
Probab=24.01 E-value=54 Score=29.12 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=18.4
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCCCCCccccCCCCCcccc
Q psy10387 105 DEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAG 146 (199)
Q Consensus 105 d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G 146 (199)
+|+.|...-.=||||||.-+. ..+|-|=..|.|.-+|
T Consensus 571 ~pknyn~~~tPDPERWLP~re-----RS~yr~KrK~k~~~~~ 607 (652)
T KOG2376|consen 571 LPKNYNPKVTPDPERWLPRRE-----RSTYRPKRKGKRAAII 607 (652)
T ss_pred CcccCCCCCCCChhhcccchh-----ccccCcccccchhhhh
Confidence 444443333345778886543 2345555555554333
No 51
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=23.39 E-value=1.5e+02 Score=18.15 Aligned_cols=24 Identities=17% Similarity=-0.009 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHH
Q psy10387 12 SSSMAFAVLYMILYPAIQTKLHQE 35 (199)
Q Consensus 12 ~~~~~~~l~~L~~~p~~~~~l~~E 35 (199)
+...+..+--++++||.+.+++.-
T Consensus 20 G~v~~~a~e~iaRqPE~~~~i~~~ 43 (66)
T PRK13467 20 GFLMANLFKSAARQPEMIGQLRSL 43 (66)
T ss_pred HHHHHHHHHHHHcChhHHHhHHHH
Confidence 344566778899999999999865
No 52
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=22.50 E-value=25 Score=26.00 Aligned_cols=36 Identities=22% Similarity=0.514 Sum_probs=23.2
Q ss_pred CCCCCCCcCCCCCCCCCCCCCccccCCCCCccccHH
Q psy10387 113 SKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDF 148 (199)
Q Consensus 113 ~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 148 (199)
.+|+|++|=.-=-.........+-|..|+-.|-|..
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence 468888883110011112457899999999999965
No 53
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=22.12 E-value=77 Score=22.69 Aligned_cols=21 Identities=10% Similarity=0.039 Sum_probs=17.6
Q ss_pred cccCceeccEEeCCCCEEEeC
Q psy10387 78 CMENTTFYDYFIPKDTMIFIS 98 (199)
Q Consensus 78 ~~~d~~~~g~~ip~g~~v~~~ 98 (199)
..+|+.++|..||+|+.-+..
T Consensus 52 f~~dv~igGk~l~AG~Ysl~t 72 (145)
T PF11138_consen 52 FSKDVTIGGKKLKAGTYSLFT 72 (145)
T ss_pred ECCCeEECCEEcCCeeEEEEE
Confidence 367899999999999987753
No 54
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=22.03 E-value=37 Score=25.06 Aligned_cols=56 Identities=18% Similarity=0.339 Sum_probs=31.7
Q ss_pred CCCCCCCcCCCCCCCCCCCCCccccCCCCCcccc-HHH--HHHHHHHHHHHHHHhceeee
Q psy10387 113 SKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAG-DFV--AQNVMFLYVTTFFQKYSVHR 169 (199)
Q Consensus 113 ~~f~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G-~~~--A~~~~~~~l~~ll~~f~~~~ 169 (199)
-+|+|++|-.---.........+-|+.|+=.|-| +.. |..-+ --++.+|++..+..
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~-~~i~~~L~~~g~~~ 87 (174)
T cd04516 29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTGAKSEDDSKLAA-RKYARIIQKLGFPA 87 (174)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHH-HHHHHHHHHcCCCC
Confidence 5788888732111111124467899999999998 333 22222 23445566666543
No 55
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=21.64 E-value=2.2e+02 Score=18.12 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=26.0
Q ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHh
Q psy10387 8 YETLSSSMAFAVLYMILYPAIQTKLHQELDEHL 40 (199)
Q Consensus 8 ~~tt~~~~~~~l~~L~~~p~~~~~l~~Ei~~~~ 40 (199)
+..++....-.+.+-++||+..+++.+.+..-+
T Consensus 46 y~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 46 YGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred cCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 455667777788888889999999999887644
Done!