RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy10387
(199 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 183 bits (467), Expect = 4e-56
Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRR-PTLDDKHHLHYVQAI 59
+++F AG +T SS++++A+ + +P +Q KL +E+DE +G +R PT DD ++ Y+ A+
Sbjct: 267 LELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDEVIGDKRSPTYDDLQNMPYLDAV 326
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I E R++ + P+ +P ++T Y IPK T++ ++L++L D + F P +F PER
Sbjct: 327 IKETLRLHPVVPLLLPREVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPER 386
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
FL GKF KS + FG G R+C G+ +A+ M L++ T Q + V P
Sbjct: 387 FLDENGKFRKSFAF-LPFGAGPRNCLGERLARMEMKLFLATLLQNFEVELPPGTDPPDID 445
Query: 180 AMSGFTTAPQPFK 192
G P+P+K
Sbjct: 446 ETPGLLLPPKPYK 458
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 133 bits (336), Expect = 7e-37
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAII 60
D F AG +T ++S+ + VL + YP IQ K + E+ + R L D+ Y AII
Sbjct: 290 DFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAII 349
Query: 61 HEVFRINTIAPITVPHCCMENTTFYD-YFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
E R ++P +P + +FIPKD I I+ +SL +EK FE P +F P R
Sbjct: 350 KETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSR 409
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
FL+P+ SN + F IG R+C G AQ+ ++L + + + +
Sbjct: 410 FLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK-IDET 463
Query: 180 AMSGFTTAPQPFKAIIRER 198
G T P FK ++ +R
Sbjct: 464 EEYGLTLKPNKFKVLLEKR 482
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 106 bits (266), Expect = 5e-27
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-TLDDKHHLHYVQAII 60
+I A ET S+ + + ++ +P IQ KL ELD LG T D H L Y+QA++
Sbjct: 300 NINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVV 359
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E R++ P+ VPH +E+ Y IP ++ I ++ W L ++ + ++ P +F+PERF
Sbjct: 360 KETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERF 419
Query: 121 LSPEGKFDKSNPN--AINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
L E K + + + + FG+GRRSC G +A ++ + + Q +
Sbjct: 420 LEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNF 466
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 103 bits (257), Expect = 8e-26
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+++F+AG +T SS + +++ M+ P+I + H+E+D+ +G +RR D L Y+QAI
Sbjct: 295 LNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAI 354
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
E FR + P+ +P + Y+IPK+T + +++W++ D +E P +F+PER
Sbjct: 355 CKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPER 414
Query: 120 FLSPEGKFDKSNPNA-----INFGIGRRSCAG 146
FLS K K +P I FG GRR CAG
Sbjct: 415 FLS--EKNAKIDPRGNDFELIPFGAGRRICAG 444
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 102 bits (257), Expect = 9e-26
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLD-DKHHLHYVQAI 59
+++F+AG +T SS++ +A+ +I +P I K +ELD +G R + D L Y+QA+
Sbjct: 303 LNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAV 362
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I E FR++ P+++P E Y IPK + +++W++ D + + +P +F+P+R
Sbjct: 363 IKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR 422
Query: 120 FLSPEGKFD----KSNPNAINFGIGRRSCAG 146
FL S+ I FG GRR CAG
Sbjct: 423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAG 453
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 97.5 bits (242), Expect = 8e-24
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 4/150 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHL---GSRRPTLDDKHHLHYVQ 57
+DI AG +T ++++ + + Y++ YP + K E+ E++ GS T DD +L Y +
Sbjct: 295 LDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFR 354
Query: 58 AIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFK 116
A++ E RI + P+ +P C+++T Y IP T + ++ W++ DEK + P +F+
Sbjct: 355 ALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFR 414
Query: 117 PERFLSPEGKFDKSNPNAINFGIGRRSCAG 146
PERFL E F ++ I FG GRR C G
Sbjct: 415 PERFLEKEVDFKGTDYEFIPFGSGRRMCPG 444
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 92.5 bits (230), Expect = 4e-22
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 26 PAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFY 85
P Q +L++E+ E G R T +D +L Y+ A+ HE R + P+ P E+TT
Sbjct: 293 PDKQERLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLG 352
Query: 86 DYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNP-NAINFGIGRRSC 144
Y IP T I I+++ D+K +E P ++ PERFL K++ ++ + FG G+R C
Sbjct: 353 GYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLG--EKYESADMYKTMAFGAGKRVC 410
Query: 145 AGDFVAQNVMFLYVTTFFQKYS 166
AG A + + + Q++
Sbjct: 411 AGSLQAMLIACMAIARLVQEFE 432
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 92.2 bits (229), Expect = 6e-22
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
MD+ G ET++S++ +A+ ++ P ++ QEL + +G +RR D L Y++
Sbjct: 310 MDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCT 369
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E R++ P+ + H E+ YFIPK + + I+ W++ D+ ++E+P FKP R
Sbjct: 370 LKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSR 428
Query: 120 FLSPEG-KFDKSNPNAINFGIGRRSCAG 146
FL P F S+ I FG GRRSC G
Sbjct: 429 FLKPGVPDFKGSHFEFIPFGSGRRSCPG 456
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 89.6 bits (222), Expect = 5e-21
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
M + AG+ET ++ + + + P++ KL +E+D LG R PT++D L Y +I
Sbjct: 397 MTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVI 456
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
+E R+ P+ + +EN Y I + IFIS+W+L K++++ KF PER+
Sbjct: 457 NESLRLYPQPPVLIRR-SLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERW 515
Query: 121 LSPEGKFDKSNPNAIN-------FGIGRRSCAGDFVA 150
D NPN N FG G R C GD A
Sbjct: 516 -----PLDGPNPNETNQNFSYLPFGGGPRKCVGDMFA 547
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 86.0 bits (213), Expect = 9e-20
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLD-DKHHLHYVQAII 60
D+ +A +T + + +A+ +I P + K+ +ELD +G R + D HL+Y++ ++
Sbjct: 303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVV 362
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E FR++ P +PH + TT Y+IP T +FI+ L + K +++ +F+PER
Sbjct: 363 RETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERH 422
Query: 121 LSPEGKFDKSNPNAIN--------FGIGRRSCAGDFVAQNVMFLYVTTFFQ--KYSVHRD 170
EG S + F G+R C G + ++ + + F +S
Sbjct: 423 WPAEG----SRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDG 478
Query: 171 PNNPDLSTKAMSGFTTA-PQPFKAIIRER 198
D+ T+ + G T +P +A+ R
Sbjct: 479 LRPEDIDTQEVYGMTMPKAKPLRAVATPR 507
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 81.6 bits (201), Expect = 3e-18
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 12 SSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLD-DKHHLHYVQAIIHEVFRINTIA 70
S+++ +A+ MI P I K +E+D +G R + D L+YV+AII E FR++ +A
Sbjct: 344 SNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVA 403
Query: 71 PITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS--PEGKFD 128
+PH + +TT Y IPK + + +S + L + K + +P FKPER L+ E
Sbjct: 404 AFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLT 463
Query: 129 KSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
+++ I+F G+R CA + + + + Q +
Sbjct: 464 ENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFK 501
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 77.1 bits (190), Expect = 7e-17
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 26/182 (14%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET ++++A+A+ ++ +P KL E D ++A++ E
Sbjct: 244 LLVAGHETTANALAWALYALLRHPDQLAKLRAEPD---------------RPLLEAVVEE 288
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R+ P+ E+ Y IP T++ +S+ + D + F +P +F PERF +
Sbjct: 289 TLRLYPPVPLA-RRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFNN 347
Query: 123 PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMS 182
+ FG G C G +A+ + + + +++ + P L +
Sbjct: 348 AH----------LPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEPPPLVRRPTL 397
Query: 183 GF 184
Sbjct: 398 VP 399
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 77.0 bits (189), Expect = 1e-16
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLD-DKHHLHYVQAIIHEVF 64
A + +++M + + M+ P I K +ELDE +G R + D +L+Y++A E F
Sbjct: 325 AAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETF 384
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
RI+ A PH ++TT YFIPK + I + L + K +++P ++PER L +
Sbjct: 385 RIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGD 444
Query: 125 G-----KFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYS--VHRD 170
G ++ ++F GRR C G V +M + + F Q ++ +H+D
Sbjct: 445 GITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQD 497
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 76.5 bits (188), Expect = 2e-16
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP--TLDDKHHLHYVQAIIHEV 63
AG +T S+++ + + ++ P+IQ+KLH E+ G + + +D H + Y++A++ E
Sbjct: 317 AGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEG 376
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS- 122
R + A +PH E+ Y IPK + + + DE+ +E P +F PERFL+
Sbjct: 377 LRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAG 436
Query: 123 --PEGKFDKSNPNAIN---FGIGRRSCAGDFVA 150
EG D + I FG+GRR CAG +A
Sbjct: 437 GDGEG-VDVTGSREIRMMPFGVGRRICAGLGIA 468
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 72.5 bits (178), Expect = 4e-15
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET S + + + + P K +ELD L R PT +D L Y+ I+E R
Sbjct: 289 AGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPPTYEDIKELKYLTRCINESMR 348
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+ P+ + +E+ Y + I IS++++ + +E +F PERF
Sbjct: 349 LYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERF----- 403
Query: 126 KFDKSNPNAIN-------FGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPN 172
D PN N F G R C GD A + + Q+ + P+
Sbjct: 404 DLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD 457
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 66.3 bits (161), Expect = 6e-13
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSR-RPTLDDKHHLHYVQAI 59
+DI G +T ++ + +A+ Y+I YP K E+ +G + + +D +L Y++A+
Sbjct: 294 LDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAV 353
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPE 118
I E R+ + PI + + + Y IP T+I ++ W++ D + + P++F PE
Sbjct: 354 IKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE 413
Query: 119 RFLSPEG--KFDKSNPNAINFGIGRRSC 144
RF+ F + + FG GRR C
Sbjct: 414 RFMKEHKGVDFKGQDFELLPFGSGRRMC 441
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 61.8 bits (150), Expect = 2e-11
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 4 FSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
F AG+ET + + + ++ + P Q K+ E+ E G P++D L + +I+E
Sbjct: 325 FFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINES 384
Query: 64 FRINTIAPITV-PHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERFL 121
R+ P T+ P E+ D IPK I+I + ++ H E+ + ++ ++F P+RF
Sbjct: 385 LRL--YPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRF- 441
Query: 122 SPEGKFDKSNPNAINFGIGRRSCAG 146
G+ + I F G R+C G
Sbjct: 442 --AGRPFAPGRHFIPFAAGPRNCIG 464
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 54.7 bits (132), Expect = 4e-09
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLD--------DKHH 52
+D+ G +++ M AV ++ P L Q +E++ +R D D
Sbjct: 257 IDMMIPGEDSVPVLMTLAVKFLSDCPV---ALQQLTEENMKLKRLKADTGEPLYWTDYMS 313
Query: 53 LHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEP 112
L + Q +I E R+ I V M++ Y IPK + S+ DE+N++ P
Sbjct: 314 LPFTQNVITETLRMGNII-NGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNP 372
Query: 113 SKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVA--QNVMFLY--VTTF 161
+F P R+ + D +N + FG G+R C G +A + +FL+ VT F
Sbjct: 373 YQFNPWRW----QEKDMNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRF 421
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 54.4 bits (131), Expect = 6e-09
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 24/156 (15%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQEL-DEHLGSR---RP----TLDDKHHLH 54
I +GYET+S++ AV Y+ +P K QEL EHL R RP +D +
Sbjct: 272 ILYSGYETVSTTSMMAVKYLHDHP----KALQELRKEHLAIRERKRPEDPIDWNDYKSMR 327
Query: 55 YVQAIIHEVFRINTIAPITVPHCCMENTT----FYDYFIPKDTMIFISLWSLFHDEKNFE 110
+ +A+I E R+ TI + + TT Y IPK I++ + +D +
Sbjct: 328 FTRAVIFETSRLATIV-----NGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYP 382
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAG 146
+P F P R+L K +S+ FG G R C G
Sbjct: 383 DPMTFNPWRWLD---KSLESHNYFFLFGGGTRLCPG 415
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 50.9 bits (122), Expect = 9e-08
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 18/178 (10%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP-----TLDDKHHLHYVQAII 60
AG+E+ +A +++ +P + K E +E R P TL D + Y+ +I
Sbjct: 298 AGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVI 357
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E R+ I+ TV + Y IPK + + D + + P +F P R+
Sbjct: 358 DETLRLINISL-TVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRW 416
Query: 121 LSPEGKFDKSNPNA---INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPD 175
D P A + FG+G R C G+ +A+ + +++ F Y + R NP
Sbjct: 417 -------DNYTPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLER--LNPG 465
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 50.7 bits (121), Expect = 1e-07
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPT----LDDKHHLHYVQAIIH 61
AGYET S+ M AV ++ P +L +E ++ + + D + + Q +++
Sbjct: 278 AGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVN 337
Query: 62 EVFRI-NTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E R+ N I I M + Y IPK +F S ++ D + F++ F P R+
Sbjct: 338 ETLRVANIIGGIF--RRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRW 395
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
S G SN FG G R C G +A+ + +++ ++S
Sbjct: 396 QSNSGTTVPSNV-FTPFGGGPRLCPGYELARVALSVFLHRLVTRFS 440
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 46.8 bits (111), Expect = 2e-06
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQEL-DEHLG-SRRPTL--------DDKHHLHY 55
AG+ET S ++A A+ ++ P K QEL +EHL +R +D + +
Sbjct: 290 AGHETSSVAIALAIFFLQGCP----KAVQELREEHLEIARAKKQSGESELNWEDYKKMEF 345
Query: 56 VQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKF 115
Q +I+E R+ + + +++ + Y IP + + ++ D +++P F
Sbjct: 346 TQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLF 404
Query: 116 KPERFLS------PEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYV 158
P R+ G + N + FG G R CAG +A+ M +++
Sbjct: 405 NPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFI 453
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 44.5 bits (105), Expect = 1e-05
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP----TLDDKHHLHYVQA 58
IF+A +T +S + + + Y+ P++ + +E + T +D +
Sbjct: 273 IFAA-RDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSR 331
Query: 59 IIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPE 118
+I E R+ +I T +E+ + Y IPK + ++ H F +P KF P
Sbjct: 332 VIQETLRVASILSFTFREA-VEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPS 390
Query: 119 RF-LSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQ---NVMFLYVTT 160
RF ++P+ PN + FG G SC G+ +A+ +V+ ++TT
Sbjct: 391 RFEVAPK-------PNTFMPFGNGTHSCPGNELAKLEISVLIHHLTT 430
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 40.8 bits (96), Expect = 2e-04
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 6 AGYETLSSSMAFAVLYMIL--YPAIQTKLHQELDEHLGSRR--PTLDDKHHLHYVQAIIH 61
AG +T++S A + +L +P + + + +E D +G + + ++ +HY+ A ++
Sbjct: 304 AGRDTVAS--ALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALY 361
Query: 62 EVFRINTIAPITV-PHCCMENTTFYD-YFIPKDTMIFI---------SLWSLFHDEKNFE 110
E R+ P+ E+ D F+ K T + +W E
Sbjct: 362 ESMRL--FPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLE---- 415
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAIN-FGIGRRSCAG 146
FKPER+L G F NP F G R C G
Sbjct: 416 ----FKPERWLK-NGVFVPENPFKYPVFQAGLRVCLG 447
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 39.5 bits (93), Expect = 6e-04
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 16/73 (21%)
Query: 104 HDEKNFEEPSKFKPERFLSPEGKFDK-------SN-PNAINFGIGRRSCAG-DFVAQNVM 154
D K F+ P +F P+RF+ EG +K SN + +G + CAG DFV V+
Sbjct: 387 RDPKVFDRPEEFVPDRFMGEEG--EKLLKYVFWSNGRETESPTVGNKQCAGKDFV---VL 441
Query: 155 F--LYVTTFFQKY 165
L+V F +Y
Sbjct: 442 VARLFVAELFLRY 454
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 35.8 bits (82), Expect = 0.010
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 3 IFS---AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAI 59
IFS AG +T SS++ + + +P + K+ E++ + +D L Y+ A
Sbjct: 306 IFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKFDN-----EDLEKLVYLHAA 360
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPE 118
+ E R+ P + + + ++ I I +++L + E+ FKPE
Sbjct: 361 LSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPE 420
Query: 119 RFLSPEGKFDKSNPNA--INFGIGRRSCAGDFVA 150
R++S G + P+ + F G R+C G +A
Sbjct: 421 RWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLA 453
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 35.5 bits (82), Expect = 0.013
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 26/193 (13%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQEL---------------DEHLGSRRP----- 45
AG +T ++++++ V +++ P + KL+ EL + R
Sbjct: 303 AGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGL 362
Query: 46 -TLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYD-YFIPKDTMIFISLWSLF 103
T D L Y+ A+I E R+ P P +E+ D + M+ +S+
Sbjct: 363 LTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMG 421
Query: 104 HDEKNF-EEPSKFKPERFLSPEGKFDKSNPNAIN-FGIGRRSCAGDFVAQNVMFLYVTTF 161
E N+ + + FKPER++ +G F ++P F G R C G A M + +
Sbjct: 422 RMEYNWGPDAASFKPERWIK-DGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALL 480
Query: 162 FQKYSVHRDPNNP 174
+ + P +P
Sbjct: 481 CRFFKFQLVPGHP 493
>gnl|CDD|128786 smart00510, TFS2M, Domain in the central regions of transcription
elongation factor S-II (and elsewhere).
Length = 102
Score = 29.2 bits (66), Expect = 0.45
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 11/46 (23%)
Query: 149 VAQNV---MFLYVTTFFQKYSV--------HRDPNNPDLSTKAMSG 183
+A + MF T +KY +D NPDL K ++G
Sbjct: 31 LAVQIEAEMFSEFGTTDKKYKNKYRSLYFNLKDKKNPDLRRKVLNG 76
>gnl|CDD|177822 PLN02164, PLN02164, sulfotransferase.
Length = 346
Score = 29.1 bits (65), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 90 PKDTMIFISLWSLFHDEKNFEEP 112
PKDT FIS+W+ H E++ + P
Sbjct: 175 PKDT--FISMWTFLHKERSQQGP 195
>gnl|CDD|226448 COG3938, COG3938, Proline racemase [Amino acid transport and
metabolism].
Length = 341
Score = 28.5 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 10/59 (16%)
Query: 27 AIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFY 85
A+ K+ Q L+E L P D + + Q F P P + N FY
Sbjct: 197 ALGVKIRQALNEQLDFVHPENPDIRGVSHCQ------FA----GPPVRPGADLRNAVFY 245
>gnl|CDD|215922 pfam00443, UCH, Ubiquitin carboxyl-terminal hydrolase.
Length = 313
Score = 28.1 bits (63), Expect = 2.9
Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 12/91 (13%)
Query: 31 KLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYF-- 88
+LH++L K H +++I ++F+ + + C E++T +
Sbjct: 104 QLHEDL-------NSLKKRKSHAAENESLITKLFQGQLESRLKCLKCKKESSTPEPFSDL 156
Query: 89 ---IPKDTMIFISLWSLFHDEKNFEEPSKFK 116
I + + L F + E+ K+
Sbjct: 157 SLPIEDSSSVLKLLTGNFLKLEELEKEEKYY 187
>gnl|CDD|224866 COG1955, FlaJ, Archaeal flagella assembly protein J [Cell motility
and secretion / Intracellular trafficking and
secretion].
Length = 527
Score = 28.5 bits (64), Expect = 2.9
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAI 28
+D++ Y +L S+ F V ++++ P +
Sbjct: 164 LDVWKDIYVSLLVSLTFLVAFILILPIL 191
>gnl|CDD|227280 COG4944, COG4944, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 213
Score = 27.8 bits (62), Expect = 3.5
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 83 TFYDYFIPKDTMIFISLW 100
T Y + +D +F++ W
Sbjct: 174 TVYAWHCTEDGPLFVATW 191
>gnl|CDD|145573 pfam02507, PSI_PsaF, Photosystem I reaction centre subunit III.
Photosystem I (PSI) is an integral membrane protein
complex that uses light energy to mediate electron
transfer from plastocyanin to ferredoxin. Subunit III
(or PSI-F) is one of at least 14 different subunits that
compose the PSI complex.
Length = 159
Score = 27.0 bits (60), Expect = 4.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 140 GRRSCAGDFVAQNVMFLYVT 159
GR S AG+F+ ++FLY+
Sbjct: 80 GRWSHAGEFLIPGILFLYIA 99
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases
II [Lipid metabolism / Secondary metabolites
biosynthesis, transport, and catabolism].
Length = 534
Score = 27.4 bits (61), Expect = 5.9
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 154 MFLYVTTFFQKYSVHRDPNNPDLSTK---AMSGFTTAPQPFKAIIRERY 199
+ V TF ++ + + ++ DLS+ +SG P ER+
Sbjct: 267 VLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERF 315
>gnl|CDD|214592 smart00268, ACTIN, Actin. ACTIN subfamily of
ACTIN/mreB/sugarkinase/Hsp70 superfamily.
Length = 373
Score = 27.2 bits (61), Expect = 6.0
Identities = 13/58 (22%), Positives = 17/58 (29%), Gaps = 4/58 (6%)
Query: 78 CMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPS----KFKPERFLSPEGKFDKSN 131
E + K+ + EK +E P K ERF PE F
Sbjct: 207 IKEKLCYVAEDFEKEMKLARESSESSKLEKTYELPDGNTIKVGNERFRIPEILFSPEL 264
>gnl|CDD|177054 CHL00132, psaF, photosystem I subunit III; Validated.
Length = 185
Score = 26.9 bits (60), Expect = 6.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 140 GRRSCAGDFVAQNVMFLYVT 159
GR S AG+F ++FLY+T
Sbjct: 99 GRWSHAGEFTIPGLLFLYIT 118
>gnl|CDD|225715 COG3174, COG3174, Predicted membrane protein [Function unknown].
Length = 371
Score = 26.9 bits (60), Expect = 8.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 8 YETLSSSMAFAVLYMILYPAIQTK 31
+E L S++ A L ++YP +
Sbjct: 97 WEELRSALELAALAAVVYPVLPNG 120
>gnl|CDD|224172 COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy
production and conversion].
Length = 405
Score = 26.4 bits (59), Expect = 9.8
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 25 YPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
+ + L L TL D+ H +++EV
Sbjct: 13 FGGLSAAKR--LARKLPDVEITLVDRRDYHLFTPLLYEV 49
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.324 0.138 0.426
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 10,418,335
Number of extensions: 957562
Number of successful extensions: 1051
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1011
Number of HSP's successfully gapped: 46
Length of query: 199
Length of database: 10,937,602
Length adjustment: 92
Effective length of query: 107
Effective length of database: 6,857,034
Effective search space: 733702638
Effective search space used: 733702638
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (25.4 bits)