RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10387
(199 letters)
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 250 bits (641), Expect = 6e-82
Identities = 64/200 (32%), Positives = 116/200 (58%), Gaps = 2/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
DIF AG ET +S + + + +++ P ++ KL++E+D+++G SR PT+ D++ L ++A
Sbjct: 279 GDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEAT 338
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I EV R+ +AP+ +PH +++ ++ + K T + I+LW+L H+EK + +P +F PER
Sbjct: 339 IREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPER 398
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
FL+P G S + + FG G RSC G+ +A+ +FL + Q++ + + S
Sbjct: 399 FLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSL 458
Query: 179 KAMSGFTTAPQPFKAIIRER 198
+ + FK I+ R
Sbjct: 459 EGIPKVVFLIDSFKVKIKVR 478
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 248 bits (636), Expect = 5e-81
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
DIF A +TLS+++ + +L YP +QT++ ELD+ +G R P + D+ +L YV A
Sbjct: 285 TDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAF 344
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
++E R ++ P+T+PH NT+ Y IPKDT++F++ WS+ HD + P F P R
Sbjct: 345 LYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPAR 404
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
FL +G +K + + F +G+R C G+ +++ +FL+++ + +PN P
Sbjct: 405 FLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP-AKM 463
Query: 179 KAMSGFTTAPQPFKAIIRER 198
G T P+ FK + R
Sbjct: 464 NFSYGLTIKPKSFKVNVTLR 483
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 247 bits (633), Expect = 8e-81
Identities = 70/200 (35%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAI 59
D+FSAG T S+++A+ +L MIL+P +Q ++ QE+D+ +G RRP + D+ H+ Y A+
Sbjct: 278 ADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAV 337
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHEV R I P+ V H + + IPK T + +L S+ DE +E+P +F PE
Sbjct: 338 IHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEH 397
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
FL +G F K + F GRR+C G+ +A+ +FL+ T+ Q +S P S
Sbjct: 398 FLDAQGHFVKP-EAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHH 456
Query: 180 AMSGFTTAPQPFKAIIRERY 199
+ F +P P++ R+
Sbjct: 457 GVFAFLVSPSPYELCAVPRH 476
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 244 bits (624), Expect = 3e-79
Identities = 64/201 (31%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
DIF AG++T++++++++++Y++ P IQ K+ +ELD +G RRP L D+ L Y++A
Sbjct: 288 NDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAF 347
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I E FR ++ P T+PH +TT ++IPK +F++ W + HD + +E+PS+F+PER
Sbjct: 348 ILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPER 407
Query: 120 FLSPEGKFDKSNPNA--INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLS 177
FL+ +G + + FG+G+R C G+ +A+ +FL++ Q+ P +
Sbjct: 408 FLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSV-PPGVKVD 466
Query: 178 TKAMSGFTTAPQPFKAIIRER 198
+ G T + + R
Sbjct: 467 LTPIYGLTMKHARCEHVQARR 487
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 242 bits (621), Expect = 4e-79
Identities = 70/200 (35%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
++ AG ET ++ + +A+L+M LYP IQ ++ +E+D +G + +P+ DDK + Y +A+
Sbjct: 279 GELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAV 338
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HEV R I P+ + H E+ Y IPK T + +L+S+ DEK + +P F PER
Sbjct: 339 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 398
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
FL G F K + F +GRR C G+ +A+ MFL+ T Q++ +H P+ K
Sbjct: 399 FLDSSGYFAKK-EALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF-PHELVPDLK 456
Query: 180 AMSGFTTAPQPFKAIIRERY 199
G T PQP+ R+
Sbjct: 457 PRLGMTLQPQPYLICAERRH 476
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 237 bits (608), Expect = 4e-77
Identities = 68/200 (34%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
D+F AG ET S+++ + +L ++ YP I+ KLH+E+D +G SR P + D+ + Y+ A+
Sbjct: 273 ADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAV 332
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HE+ R T+ P +PH +T F Y IPK T++ +L S+ +D + F +P KFKPE
Sbjct: 333 VHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEH 392
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLS-T 178
FL+ GKF + F G+R CAG+ +A+ +FL + Q +++ + D+ +
Sbjct: 393 FLNENGKFKY-SDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLS 451
Query: 179 KAMSGFTTAPQPFKAIIRER 198
GF P +K + R
Sbjct: 452 PIHIGFGCIPPRYKLCVIPR 471
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 237 bits (607), Expect = 8e-77
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG----SRRPTLDDKHHLHYV 56
+D+F G ET +S++++AV +++ +P IQ +L +ELD LG R T D+ L +
Sbjct: 285 VDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLL 344
Query: 57 QAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFK 116
A I EV R+ + P+ +PH ++ + Y IP+ ++ +L DE +E+P +F+
Sbjct: 345 NATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFR 404
Query: 117 PERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPN--NP 174
P+RFL P +A+ FG G R C G+ +A+ +F+ + Q +++ P P
Sbjct: 405 PDRFLEPGANP-----SALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALP 459
Query: 175 DLSTKAMSGFTTAPQPFKAIIRER 198
L G QPF+ ++ R
Sbjct: 460 SLQPDPYCGVNLKVQPFQVRLQPR 483
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 236 bits (604), Expect = 1e-76
Identities = 59/201 (29%), Positives = 117/201 (58%), Gaps = 3/201 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+++F G ET+S+++ + L ++ +P ++ K+H+E+D +G +R+P +D+ + Y++A+
Sbjct: 274 LNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R + P+++ ++T F D+F+PK T ++ L S+ D F P F P+
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLS-T 178
FL+ +G+F K + + F IG+R+C G+ +A+ +FL+ TT Q + + + D+ +
Sbjct: 394 FLNEKGQFKK-SDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVS 452
Query: 179 KAMSGFTTAPQPFKAIIRERY 199
GF T P+ + R+
Sbjct: 453 PKHVGFATIPRNYTMSFLPRH 473
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 235 bits (602), Expect = 3e-76
Identities = 66/201 (32%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+D+F AG ET S+++ +A+L ++ +P + K+ +E++ +G +R P + D+ H+ Y A+
Sbjct: 275 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 334
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HEV R + P ++PH + F +Y IPK T I ISL S+ HD K F P F P
Sbjct: 335 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 394
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDL-ST 178
FL G F KS + F G+R C G+ +A +FL++T+ Q +++ + +L +T
Sbjct: 395 FLDEGGNFKKS-KYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTT 453
Query: 179 KAMSGFTTAPQPFK--AIIRE 197
++GF + P ++ I
Sbjct: 454 PVVNGFASVPPFYQLCFIPIH 474
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 233 bits (596), Expect = 2e-75
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 3/201 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++ +E+++ +GS R P LDD+ + Y A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLS-T 178
FL G ++ + F +G+R C G+ +A+ +FL+ TT Q +S+ D+ T
Sbjct: 394 FLDANGALKRN-EGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
Query: 179 KAMSGFTTAPQPFKAIIRERY 199
SG P ++ R+
Sbjct: 453 PRESGVGNVPPSYQIRFLARH 473
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 181 bits (461), Expect = 3e-55
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
++ A ET ++S+ + + + P Q +L QE+ L ++ P +D ++ Y++A
Sbjct: 289 TELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKAC 348
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E R+ P + T +Y +PK T++ ++ L E NFE+ KF+PER
Sbjct: 349 LKESMRLTPSVP-FTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPER 407
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
+L E K NP A + FGIG+R C G +A+ + L + QKY + +N +
Sbjct: 408 WLQKEKKI---NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI-VATDNEPVEM 463
Query: 179 KAMSGFTTAPQPFKAIIRER 198
G + R R
Sbjct: 464 L-HLGILVPSRELPIAFRPR 482
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 151 bits (384), Expect = 5e-44
Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 10/201 (4%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
++ + G +T S ++ + + M +Q L E+ ++ + ++A
Sbjct: 281 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKAS 340
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
I E R++ I+ T+ + + DY IP T++ +++++L + F +P F P R
Sbjct: 341 IKETLRLHPISV-TLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTR 399
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
+LS + + FG G R C G +A+ M +++ + + V + D+ T
Sbjct: 400 WLSKD---KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV-EIQHLSDVGT 455
Query: 179 KAMSGFTTAP-QPFKAIIRER 198
P +P
Sbjct: 456 T--FNLILMPEKPISFTFWPF 474
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 137 bits (346), Expect = 1e-38
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
+ + AG+ETL+S+++ L + + I+ ++ QE ++ S+ T + + Y+ ++
Sbjct: 249 LLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVL 308
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
EV R+ +++ F + PK ++ + D + +P KF PERF
Sbjct: 309 QEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF 367
Query: 121 LSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPD 175
P+G + P A + FG G R C G A+ M L+ T Q++ P
Sbjct: 368 T-PDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNL 422
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 135 bits (343), Expect = 3e-38
Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 4/200 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-RRPTLDDKHHLHYVQAI 59
+ + AG+ T S + ++ ++ ++ + + ELDE G R + + ++ +
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENV 310
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ E R++ I + + I + ++ S ++F +P F P R
Sbjct: 311 LKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
+ P + D N I FG GR C G A + + ++Y
Sbjct: 370 YEQPRQE-DLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRN 428
Query: 179 KAMSGFTTAPQPFKAIIRER 198
QP R R
Sbjct: 429 DHSKMVVQLAQPAAVRYRRR 448
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 135 bits (343), Expect = 3e-38
Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 7/197 (3%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I + G ET++S++ + + + +P ++ E++ G R +D L + +I E
Sbjct: 271 ILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVE 330
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R+ + + + + Y IP I S +++ D K++++ +F P+R+L
Sbjct: 331 AMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP 389
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAM 181
A F G+R C D + + L KY + + D
Sbjct: 390 ERAA--NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSND---AVR 444
Query: 182 SGFTTAPQPFKAIIRER 198
G T P R
Sbjct: 445 VGITLRPHDLLVRPVAR 461
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 134 bits (340), Expect = 1e-37
Identities = 35/226 (15%), Positives = 73/226 (32%), Gaps = 29/226 (12%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGS-----------RRPTLDD 49
+ + A + +++ MI P +E+ L + + +
Sbjct: 263 LVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAE 322
Query: 50 KHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTF----YDYFIPKDTMIFISLWSLFHD 105
+ L + +II E R+++ + E+ T Y I KD +I + + D
Sbjct: 323 LNDLPVLDSIIKESLRLSSASLN--IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 106 EKNFEEPSKFKPERFLSPEGKFDKSNPNAIN--------FGIGRRSCAGDFVAQNVMFLY 157
+ + +P FK +R+L GK + FG G C G A + + +
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 158 VTTFFQKYS---VHRDPNNPDLSTKAMSGFTTAP-QPFKAIIRERY 199
+ + + P L P + + ++
Sbjct: 441 LILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKFKH 486
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 132 bits (334), Expect = 1e-36
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
+++ A +T+S S+ F + + +P ++ + +E+ +G R +DD L ++ I
Sbjct: 301 LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFI 360
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
+E R + + V +E+ Y + K T I +++ + H + F +P++F E F
Sbjct: 361 YESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRM-HRLEFFPKPNEFTLENF 418
Query: 121 LSPEGKFDKSNPNA--INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
K+ P FG G R CAG ++A +M + T +++ V S
Sbjct: 419 A-------KNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESI 471
Query: 179 KAMSGFTTAPQPFK 192
+ + + P K
Sbjct: 472 QKIHDLSLHPDETK 485
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 131 bits (332), Expect = 2e-36
Identities = 34/222 (15%), Positives = 67/222 (30%), Gaps = 24/222 (10%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP--------TLDDKHH 52
+ A + + + +L+++ P + EL+ L
Sbjct: 268 VLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDS 327
Query: 53 LHYVQAIIHEVFRINTIAPIT---VPHCCMENTTFYDYFIPKDTMIFIS-LWSLFHDEKN 108
+ +++ E R+ IT V M ++ + + + + S D +
Sbjct: 328 TPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEI 387
Query: 109 FEEPSKFKPERFLSPEGKFDKSNPNAIN--------FGIGRRSCAGDFVAQNVMFLYVTT 160
+ +P FK RFL+P+G K +G G C G A N + +V
Sbjct: 388 YTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFL 447
Query: 161 FFQKYSVHRDPNN---PDLSTKAMSGFTTAPQ-PFKAIIRER 198
+ + P+ P+ R R
Sbjct: 448 VLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR 489
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 129 bits (327), Expect = 7e-36
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 11/199 (5%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
AG+ET S ++FA+ +++ P + K +E L P+ L YV +++E
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 63 VFRINTIAPITVPHCCMENTTFYD-YFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPERF 120
R+ AP E+T Y + K + + + L D+ + ++ +F+PERF
Sbjct: 321 ALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 121 LSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
+P +A FG G+R+C G A + L + + + N
Sbjct: 380 ENPSAI----PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE---LD 432
Query: 180 AMSGFTTAPQPFKAIIRER 198
T P+ F + +
Sbjct: 433 IKETLTLKPEGFVVKAKSK 451
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 126 bits (318), Expect = 1e-34
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 7/171 (4%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRR-PTLDDKHHLHYVQAIIHEVF 64
AG+ET ++ +AF V+ + P I +L E+DE +GS+R +D L Y+ ++ E
Sbjct: 254 AGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESL 313
Query: 65 RINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
R+ A E T +P +T + S + + + FE+P F P+RF P
Sbjct: 314 RLYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF-GPG 371
Query: 125 GKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNP 174
F +G RSC G AQ + + + Q+ P
Sbjct: 372 A---PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR 419
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 125 bits (316), Expect = 3e-34
Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 22/217 (10%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
+ + + + Y++ +P + +E+ G + + + +++
Sbjct: 259 LLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKNTPVFDSVL 316
Query: 61 HEVFRINTIAPITVPHCCMENTTFYD-----YFIPKDTMIFISLW-SLFHDEKNFEEPSK 114
E R+ A I ++ Y + + + + + S D + ++P
Sbjct: 317 WETLRLTAAALI--TRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEM 374
Query: 115 FKPERFLSPEGKFDKSNPNAIN--------FGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
F+ +RFL+ + K +G C G A + + V T ++
Sbjct: 375 FQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFD 434
Query: 167 VHR-DPNNP-DLSTKAMSGFTTAP--QPFKAIIRERY 199
V D N L + GF + R R+
Sbjct: 435 VELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRF 471
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 122 bits (307), Expect = 4e-33
Identities = 40/196 (20%), Positives = 67/196 (34%), Gaps = 8/196 (4%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRP--TLDDKHHLHYVQAIIHEV 63
AG T S++ A+ ++ +Q K + E G P T D L+ + I E
Sbjct: 263 AGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKET 322
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSP 123
R+ I + T Y IP + +S + ++ E F P+R+L
Sbjct: 323 LRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL-- 379
Query: 124 EGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMS 182
+ A + FG GR C G+ A + +T + Y T +
Sbjct: 380 QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFP--TVNYT 437
Query: 183 GFTTAPQPFKAIIRER 198
P+ + R
Sbjct: 438 TMIHTPENPVIRYKRR 453
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 117 bits (295), Expect = 3e-31
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 7/171 (4%)
Query: 4 FSAGYETLSSSMAFAVLYMI-LYPAIQTKLHQELDEHLGSR-RPTLDDKHHLHYVQAIIH 61
AGYET SS ++F +Y + +P +Q KL +E+D L ++ PT D + Y+ +++
Sbjct: 281 IFAGYETTSSVLSFI-MYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 339
Query: 62 EVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFL 121
E R+ IA C ++ FIPK ++ I ++L D K + EP KF PERF
Sbjct: 340 ETLRLFPIAMRL-ERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF- 397
Query: 122 SPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDP 171
S + K D +P FG G R+C G A M L + Q +S
Sbjct: 398 SKKNK-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCK 447
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 114 bits (287), Expect = 2e-30
Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 13/195 (6%)
Query: 6 AGYETLSSSMAFAVLYMILYPAI--QTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEV 63
AG T S + +++L+++ + L +E++E + + + + + E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPA-QLNYNNVMDEMPFAERCARES 322
Query: 64 FRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSP 123
R + + + M + Y +PK +I S HDE+ F EP ++ PER
Sbjct: 323 IRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKV 381
Query: 124 EGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSG 183
EG F I FG G C G + + T F+ Y +
Sbjct: 382 EGAF-------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV--PDPDYHT 432
Query: 184 FTTAPQPFKAIIRER 198
P + ++
Sbjct: 433 MVVGPTASQCRVKYI 447
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 111 bits (280), Expect = 2e-29
Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 30/189 (15%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
+S + F+ L + +P + L + + + EV R
Sbjct: 242 RPIVAISYFLVFSALALHEHPKYKEWLRSG----------------NSREREMFVQEVRR 285
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
P + ++ + + K T + + L+ HD + ++ P +F+PERF
Sbjct: 286 YYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAE--- 341
Query: 126 KFDKSNPNA-INFGIGR----RSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKA 180
+ N I G G C G+ + VM + + + S
Sbjct: 342 --REENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYS--- 396
Query: 181 MSGFTTAPQ 189
++ + P+
Sbjct: 397 LARMPSLPE 405
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 104 bits (261), Expect = 7e-27
Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 31/189 (16%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
++ + F + I+ L Q+ D Y + + EV R
Sbjct: 241 RPTVAIAVYITFVAHALQTCSGIRAALVQQPD-----------------YAELFVQEVRR 283
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
P V ++ + P+ + + L+ HD + +P +F+PERF + +
Sbjct: 284 FYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE 342
Query: 126 KFDKSNPNA-INFGIGR----RSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKA 180
I G G C G+++ +M + + +
Sbjct: 343 D-----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSID--- 394
Query: 181 MSGFTTAPQ 189
+ P+
Sbjct: 395 FARLPALPK 403
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 99 bits (250), Expect = 3e-25
Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 31/198 (15%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET++S++ ++ L + P Q ++ + + A E
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEA-----------------ALAAFQE 260
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R+ A I + + +P T + +S + F + F+PERFL
Sbjct: 261 ALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLE 317
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAM 181
G FG+G+R C G A + + FF+++ + P + +
Sbjct: 318 ERGT----PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPF-----PRVL 368
Query: 182 SGFTTAPQ-PFKAIIRER 198
+ T P+ A RE
Sbjct: 369 AQVTLRPEGGLPARPREE 386
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 99.2 bits (247), Expect = 9e-25
Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 22/182 (12%)
Query: 3 IFSAGYETLSSSMAFAVLYMILY--PAIQTKLHQELDEHLGS---RRPTLDDKHHLHYVQ 57
+ + + L I + T+L +E+ + S TL+ + +
Sbjct: 273 VCFNTFGGVKILFPNT-LKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTK 331
Query: 58 AIIHEVFRINTIAPITVPHCCMENTTF----YDYFIPKDTMIFISLWSLFHDEKNFEEPS 113
++++E RI P N T + + K M+F D K F+ P
Sbjct: 332 SVVYESLRIEPPVPP-QYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPE 390
Query: 114 KFKPERFLSPEGK-------FDKSN-PNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
++ P+RF +G+ + SN P + + + CAG + L+V F++Y
Sbjct: 391 EYVPDRF-VGDGEALLKYVWW--SNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY 447
Query: 166 SV 167
Sbjct: 448 DS 449
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 97.7 bits (243), Expect = 4e-24
Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 18/183 (9%)
Query: 2 DIFSAGYETLSSSMAFAVLYMILY-----PAIQTKLHQELDEHLGS--RRPTLDDKHHLH 54
++ A M M+ + +L +E+ + S T+ +
Sbjct: 286 NLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKME 345
Query: 55 YVQAIIHEVFRINTIAPITVPHC---CMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEE 111
+++++E R + + + + M++ D K F+
Sbjct: 346 LTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDR 405
Query: 112 PSKFKPERFLSPEGKFDKSN-------PNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQK 164
+F PERF E P +G + CAG V L+V F++
Sbjct: 406 ADEFVPERF-VGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRR 464
Query: 165 YSV 167
Y
Sbjct: 465 YDS 467
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 39.6 bits (93), Expect = 4e-04
Identities = 21/145 (14%), Positives = 50/145 (34%), Gaps = 31/145 (21%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G +T+ + + F ++Y+ +P ++ +E P +Q + E
Sbjct: 253 LLLGGLDTVVNFLGFMMIYLSRHPETVAEMRRE---------PLK--------LQRGVEE 295
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+FR ++ + + F+ + + +I + D+++ ++P R
Sbjct: 296 LFRRFA--VVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR--- 350
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAG 146
F G CAG
Sbjct: 351 --------RDVTHSTFAQGPHRCAG 367
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 39.2 bits (92), Expect = 4e-04
Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 31/145 (21%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G +T+ + ++F++ ++ P + +L + P + A E
Sbjct: 246 LLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER---------PER--------IPAACEE 288
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R + + + F+ + K I + DE+ P R
Sbjct: 289 LLRRFS--LVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR--- 343
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAG 146
+ FG G C G
Sbjct: 344 --------QKVSHTTFGHGSHLCLG 360
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 37.2 bits (87), Expect = 0.002
Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 29/144 (20%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G + + ++ + ++ +L P L + + E
Sbjct: 229 LLLGGIDNTARFLSSVFWRLAWDIELRRRLIAH---------PEL--------IPNAVDE 271
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R P V + T D + + D F+ P ER
Sbjct: 272 LLRFYG--PAMVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER--- 326
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
N + ++ G G C G
Sbjct: 327 ------TPNRH-LSLGHGIHRCLG 343
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 36.9 bits (86), Expect = 0.002
Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 18/144 (12%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ A E ++A + +++ P + + +L V I E
Sbjct: 266 VLLAATEPADKTLALMIYHLLNNPEQMNDVLAD---------RSL--------VPRAIAE 308
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R + P ++T I KDT++F + + D + FE+P F R
Sbjct: 309 TLRYKPPVQLI-PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDL 367
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
+ FG G +C G
Sbjct: 368 GIKSAFSGAARHLAFGSGIHNCVG 391
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 36.8 bits (86), Expect = 0.003
Identities = 27/144 (18%), Positives = 44/144 (30%), Gaps = 31/144 (21%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G ET ++ + + + P I + R + E
Sbjct: 185 LIIGGNETTTNLIGNMIRVIDENPDIIDDALKN--------RSG------------FVEE 224
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R + E++ + I K + + L S DE F+EP FK R
Sbjct: 225 TLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR--- 281
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
+ + FGIG C G
Sbjct: 282 -------REMH-LAFGIGIHMCLG 297
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 36.1 bits (84), Expect = 0.005
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 31/145 (21%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G +T+ + ++F ++++ +P + +L + P + E
Sbjct: 252 LLLGGLDTVVNFLSFFMIHLARHPELVAELRSD---------PLK--------LMRGAEE 294
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+FR ++ ++ + F+ + MI + D+ EP K R
Sbjct: 295 MFRRFP--VVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR--- 349
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAG 146
+ FG G CAG
Sbjct: 350 --------RSISHSTFGGGPHRCAG 366
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 36.1 bits (84), Expect = 0.005
Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 27/144 (18%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G +T+++ + L++ +P Q L RP L + A E
Sbjct: 231 LLFGGLDTVAAMIGMVALHLARHPEDQRLLR---------ERPDL--------IPAAADE 273
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R + V + + I K ++++ D +FE P + + +R L+
Sbjct: 274 LMRRYP--TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA 331
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
P + G+G C G
Sbjct: 332 P-------IRH-TTMGVGAHRCVG 347
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 34.9 bits (81), Expect = 0.011
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 27/144 (18%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I +AG +T +AFAVL ++ P + P L ++ + E
Sbjct: 251 IIAAGTDTTIYLIAFAVLNLLRSPEALELVK---------AEPGL--------MRNALDE 293
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
V R + I I ++ + I K M+F+ + S D F P F R
Sbjct: 294 VLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR--- 350
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
++ + + +G G C G
Sbjct: 351 ------DTSAS-LAYGRGPHVCPG 367
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 34.6 bits (80), Expect = 0.016
Identities = 26/141 (18%), Positives = 42/141 (29%), Gaps = 27/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG + +S + VL M+ +P Q + E+ R
Sbjct: 236 AGDDNISGMIGLGVLAMLRHPEQIDAFR---------GDEQS--------AQRAVDELIR 278
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
T+ P E+ T I K + SL + D + + R
Sbjct: 279 YLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR------ 332
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ P+ + FG G C G
Sbjct: 333 ---EPIPH-VAFGHGVHHCLG 349
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 34.2 bits (79), Expect = 0.021
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 19/118 (16%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG ET +++ VL + YP + + + D + + E
Sbjct: 271 LVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPT----------------AVEE 314
Query: 63 VFRINTIAPIT-VPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ R + P+ + ++ + + + S DE F +P F R
Sbjct: 315 IVRWAS--PVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR 370
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 34.1 bits (79), Expect = 0.022
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 25/141 (17%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG T+ + +A V + +P +L P+L + E+ R
Sbjct: 240 AGNATMVNMIALGVATLAQHPDQLAQLKAN---------PSL--------APQFVEELCR 282
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+T + + + E+ D + + I S S DE+ FE P +F R P+
Sbjct: 283 YHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQD 342
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ FG G C
Sbjct: 343 --------PLGFGFGDHRCIA 355
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 34.2 bits (79), Expect = 0.023
Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 38/160 (23%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G +T +SM VL + P KL + T+ + E
Sbjct: 262 LIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP-----ALVETM------------VPE 304
Query: 63 VFRINTIAPITVPH---CCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ R T P + H + ++ I K + + +S D++ + P +F +R
Sbjct: 305 IIRWQT--P--LAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR 360
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQ---NVMF 155
P ++FG G C G+ +A+ +++
Sbjct: 361 ----------PRPRQHLSFGFGIHRCVGNRLAEMQLRILW 390
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 33.4 bits (77), Expect = 0.033
Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 28/142 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG + S + A++ +I P ++ LH++ P L + A + E+ R
Sbjct: 233 AGVISTGSFLTTALISLIQRPQLRNLLHEK---------PEL--------IPAGVEELLR 275
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
IN +P + D + K ++ + L D ++F P + +R
Sbjct: 276 INLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR------ 329
Query: 126 KFDKSNPNA-INFGIGRRSCAG 146
NP + + FG G+ C G
Sbjct: 330 ----PNPTSHLAFGRGQHFCPG 347
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 33.0 bits (76), Expect = 0.056
Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 27/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET +S + +V+ ++ +P L +L V + E+ R
Sbjct: 244 AGHETTASMTSLSVITLLDHPEQYAALR---------ADRSL--------VPGAVEELLR 286
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
IA I + I + + D +E+P R
Sbjct: 287 YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR------ 340
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ + + FG G C G
Sbjct: 341 ---SARHH-LAFGFGVHQCLG 357
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 32.6 bits (75), Expect = 0.064
Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 27/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
A ++T + + ++ P L P+L V + E+ R
Sbjct: 237 AAHDTTACMIGLGTALLLDSPDQLALLR---------EDPSL--------VGNAVEELLR 279
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
TI + I K + + + D EEP +F R
Sbjct: 280 YLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR------ 333
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ P+ + FG G C G
Sbjct: 334 ---RPAPH-LAFGFGAHQCIG 350
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 32.7 bits (75), Expect = 0.073
Identities = 31/145 (21%), Positives = 45/145 (31%), Gaps = 30/145 (20%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ G ET ++ AV + P + T L V ++ E
Sbjct: 251 VLIGGNETTRHAITGAVHALATVPGLLTALRDG---------SAD--------VDTVVEE 293
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
V R + A + T +P T + L + D F++P F P R
Sbjct: 294 VLRWTSPAMHV-LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR--- 349
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAG 146
PN I FG G C G
Sbjct: 350 --------KPNRHITFGHGMHHCLG 366
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 32.6 bits (75), Expect = 0.074
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 26/144 (18%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
++ G+ + +A + P + T + AII+E
Sbjct: 230 FYAVGHMAIGYLIASGIELFARRPEVFTAFR---------NDESA--------RAAIINE 272
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R++ E+ I + I + + D + F++P F R
Sbjct: 273 MVRMDPPQLSF-LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR--P 329
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
P + N ++FG+G SCAG
Sbjct: 330 PAA-----SRN-LSFGLGPHSCAG 347
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 32.7 bits (74), Expect = 0.080
Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 30/140 (21%)
Query: 36 LDEHL-GSRRPTLDDKHHLHYVQ--AIIHEVFRINTIAPITVP-HC-CMENTTFYDYFIP 90
L+ L ++ P+ D+ + + + F P+ P H + + I
Sbjct: 389 LNLTLRKAKAPSGLDQSRIPFSERKLKFSNRF-----LPVASPFHSHLLVPAS---DLIN 440
Query: 91 KDTMIFISLWS-------LFH--DEKNFEEPSKFKPER-----FLSP---EGKFDKSNPN 133
KD + ++ ++ D + S ER P E +
Sbjct: 441 KDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATH 500
Query: 134 AINFGIGRRSCAGDFVAQNV 153
++FG G S G +N
Sbjct: 501 ILDFGPGGASGLGVLTHRNK 520
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 32.3 bits (74), Expect = 0.083
Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 28/144 (19%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET + +A A L M+ P L + + A+I E
Sbjct: 253 LLIAGHETTVNLIANAALAMLRTPGQWAALAAD---------GSR--------ASAVIEE 295
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R + + ++ T + +PK + + L + D P +F P+R
Sbjct: 296 TMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR--- 351
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
+ + FG G C G
Sbjct: 352 ------AQIRH-LGFGKGAHFCLG 368
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 31.9 bits (73), Expect = 0.10
Identities = 35/160 (21%), Positives = 54/160 (33%), Gaps = 39/160 (24%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I +AG++T SSS A++ + P + + P L + E
Sbjct: 264 IATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDP-----ALIPRL------------VDE 306
Query: 63 VFRINTIAPITVPH---CCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
R P V + +T I + I +S S DE+ F P +F R
Sbjct: 307 AVRWTA--P--VKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR 362
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQ---NVMF 155
PN + FG G C G +A+ + F
Sbjct: 363 -----------FPNRHLGFGWGAHMCLGQHLAKLEMKIFF 391
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 31.8 bits (73), Expect = 0.13
Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 27/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
G ET++ + F VL ++ P L P + +++E+ R
Sbjct: 245 GGVETVAGMIGFGVLALLDNPGQIELLF---------ESPEK--------AERVVNELVR 287
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+ P +++ I + S+ DE +P R
Sbjct: 288 YLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR------ 341
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ + + FG G C G
Sbjct: 342 ---AAVSD-VGFGHGIHYCVG 358
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 31.5 bits (72), Expect = 0.17
Identities = 29/147 (19%), Positives = 45/147 (30%), Gaps = 32/147 (21%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ T + + V + +PA ++ P + AI+ E
Sbjct: 238 LLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED---------PGR--------IPAIVEE 280
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
V R P + T IP D M+ + S D ++P +F P R
Sbjct: 281 VLRYRPPFPQM-QRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR--- 336
Query: 123 PEGKFDKSNPNAIN---FGIGRRSCAG 146
FG G C G
Sbjct: 337 --------KSGGAAQLSFGHGVHFCLG 355
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 31.4 bits (72), Expect = 0.17
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 28/144 (19%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET + ++ +VL ++ +P KL + P L + + E
Sbjct: 231 LAIAGHETTVNLISNSVLCLLQHPEQLLKLREN---------PDL--------IGTAVEE 273
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R + +T E+ I + +++ L + D F P F R
Sbjct: 274 CLRYESPTQMT-ARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR--- 329
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
NP+ ++FG G C G
Sbjct: 330 ------SPNPH-LSFGHGHHVCLG 346
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 31.1 bits (71), Expect = 0.25
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 27/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG ET +S +A + L ++ P + +L ++ P L + A + E+ R
Sbjct: 249 AGRETTTSMIALSTLLLLDRPELPAELRKD---------PDL--------MPAAVDELLR 291
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+ ++A E+ +P D + L HD + F++P + R
Sbjct: 292 VLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHR------ 345
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
N + + FG G C G
Sbjct: 346 ---TDNHH-VAFGYGVHQCVG 362
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 30.4 bits (69), Expect = 0.32
Identities = 32/145 (22%), Positives = 48/145 (33%), Gaps = 30/145 (20%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
SAG++T S+S A A L + P + ++ + L + I+ E
Sbjct: 286 TASAGHDTTSASSAGAALALARDPDLFARVKAD---------RNL--------LPGIVEE 328
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R T +T I + ++ + HD F EP KF P R
Sbjct: 329 AIRWTTPVQHF-MRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR--- 384
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAG 146
N + FG G C G
Sbjct: 385 --------PANRHLAFGAGSHQCLG 401
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 30.3 bits (69), Expect = 0.35
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 27/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET ++ ++ V+ ++ +P T + P + E+ R
Sbjct: 245 AGHETTANMISLGVVGLLSHPEQLTVVK---------ANPGR--------TPMAVEELLR 287
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
TIA E+ I + +S+ S D F++P+ ER
Sbjct: 288 YFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER------ 341
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ + + FG G C G
Sbjct: 342 ---GARHH-LAFGFGPHQCLG 358
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 30.0 bits (68), Expect = 0.45
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 26/120 (21%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG ET +S+ ++ +P + + E
Sbjct: 265 LAVAGNETTRNSITQGMMAFAEHPDQWELYKKVR-------------------PETAADE 305
Query: 63 VFRINTIAPITVPH---CCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ R T P V + + I K + + S DE+ F++P F R
Sbjct: 306 IVRWAT--P--VTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR 361
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 29.9 bits (68), Expect = 0.58
Identities = 29/145 (20%), Positives = 47/145 (32%), Gaps = 30/145 (20%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
I G ET +++ ++ L ++ P+L + I E
Sbjct: 227 ILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD---------PSL--------LPGAIEE 269
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R +T F+ + + + S DE F EP KF +R
Sbjct: 270 MLRWTAPVKNM-CRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR--- 325
Query: 123 PEGKFDKSNPNA-INFGIGRRSCAG 146
NPN+ + FG G C G
Sbjct: 326 --------NPNSHLAFGFGTHFCLG 342
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 29.6 bits (67), Expect = 0.62
Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 27/144 (18%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET + +A + ++ +P L + TL + + E
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRAD---------MTL--------LDGAVEE 302
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
+ R +E IP + + L + F +P +F R
Sbjct: 303 MLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR--- 359
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
+ + + FG G C G
Sbjct: 360 ------DTAGH-LAFGHGIHFCIG 376
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 29.1 bits (66), Expect = 0.89
Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 27/144 (18%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ AG+ET + + VL ++ +P + L ++ P+L + + + E
Sbjct: 233 LLIAGHETTVNLIGNGVLALLTHPDQRKLLAED---------PSL--------ISSAVEE 275
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLS 122
R ++ E+ T+ IP M+ + L + D EP + R
Sbjct: 276 FLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR--- 332
Query: 123 PEGKFDKSNPNAINFGIGRRSCAG 146
++ + FG G C G
Sbjct: 333 ------DASGG-VFFGHGIHFCLG 349
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 28.8 bits (65), Expect = 1.2
Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 28/142 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AGYE+ ++ +A V ++ P ++ +L P L + + + E+ R
Sbjct: 254 AGYESTTTQIADFVYLLMTRPELRRQLLDR---------PEL--------IPSAVEELTR 296
Query: 66 INTIAP-ITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
+ P +E+ T I + S + D+ F + + +R
Sbjct: 297 WVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR----- 351
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
N + + FG G C G
Sbjct: 352 ----TPNQH-LGFGHGVHHCLG 368
>2wsc_F Photosystem I reaction center subunit III, chloroplastic;
photosynthesis, electron transfer, membrane proteins,
large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A
{Spinacia oleracea} PDB: 2wse_F* 2wsf_F*
Length = 231
Score = 28.3 bits (62), Expect = 1.3
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 140 GRRSCAGDFVAQNVMFLYVT 159
G + G+F+ ++FLY+
Sbjct: 152 GDQRHWGEFITPGILFLYIA 171
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 28.3 bits (64), Expect = 1.7
Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 32/142 (22%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG ET ++ ++ +V+ + ++ R L I E R
Sbjct: 209 AGNETTTNLISNSVIDFTRFNL-WQRI----------REENL--------YLKAIEEALR 249
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+ T E D I + + + + S DE+ F + KF P+R
Sbjct: 250 YSPPVMRT-VRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR------ 302
Query: 126 KFDKSNPNA-INFGIGRRSCAG 146
NPN ++FG G C G
Sbjct: 303 -----NPNPHLSFGSGIHLCLG 319
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 28.0 bits (63), Expect = 2.0
Identities = 23/145 (15%), Positives = 39/145 (26%), Gaps = 28/145 (19%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ SAGYET + + AV ++ P + + ++ E
Sbjct: 239 MISAGYETTVNVIDQAVHTLLTRPDQLALVRKG---------EVT--------WADVVEE 281
Query: 63 VFRINTIAPITVPHCCMENTTFYD-YFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFL 121
R + + D I + I S + E+ F R
Sbjct: 282 TLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATR-- 339
Query: 122 SPEGKFDKSNPNAINFGIGRRSCAG 146
+ + FG G C G
Sbjct: 340 -------TVKEH-LAFGHGVHFCLG 356
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 28.1 bits (63), Expect = 2.2
Identities = 18/142 (12%), Positives = 40/142 (28%), Gaps = 30/142 (21%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG E ++++ AVL + P + ++ P Q + EV R
Sbjct: 222 AGAEMTANTVVDAVLAVSAEPGLAERIA---------DDPAA--------AQRTVAEVLR 264
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
++ + ++ I + + + + + D + F EP + +R
Sbjct: 265 LHPALHLE-RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR------ 317
Query: 126 KFDKSNPNA-INFGIGRRSCAG 146
Sbjct: 318 -----PDADRALSAHRGHPGRL 334
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 27.9 bits (63), Expect = 2.5
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 80 ENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA-INFG 138
E D I + ++ + + S DE+ F++P F P+R PN ++FG
Sbjct: 263 EKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR-----------TPNPHLSFG 311
Query: 139 IGRRSCAG 146
G C G
Sbjct: 312 SGIHLCLG 319
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 27.6 bits (62), Expect = 2.7
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 28/141 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG+ET +++A L +I +P L R P V ++ E+ R
Sbjct: 243 AGHETTVNAIALGALTLIQHPEQIDVLL---------RDPGA--------VSGVVEELLR 285
Query: 66 INTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEG 125
+++ E+ I + +S+ + D K +E P F R
Sbjct: 286 FTSVSDHI-VRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR------ 338
Query: 126 KFDKSNPNAINFGIGRRSCAG 146
+ + + FG G C G
Sbjct: 339 ---NARHH-VGFGHGIHQCLG 355
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 27.6 bits (62), Expect = 2.9
Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 29/142 (20%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
G + ++ + ++ + ++ RP + E+ R
Sbjct: 245 GGEAV-THNVGQMLYLLLTRRELMARMR---------ERPGA--------RGTALDELLR 286
Query: 66 INTIAP-ITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
+ + + +E+ + I +++S + D F +P + +R
Sbjct: 287 WISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----- 341
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
NP+ + +G G C G
Sbjct: 342 ----DPNPH-LAYGNGHHFCTG 358
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 27.5 bits (61), Expect = 3.2
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 28 IQTKLHQELDEHLGSRR--PTLDDKHHLHYVQAIIHEVFRINTIAPITVP 75
++ K + EH G R P L + ++ + +I EV + P
Sbjct: 890 VKAKYETSILEHSGIRLIEPELFNGYNPEK-KEMIQEVIVEEDLEPFEAS 938
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 27.2 bits (61), Expect = 3.6
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 28/142 (19%)
Query: 6 AGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFR 65
AG ++++S M V+ + +P + + P + + + EV R
Sbjct: 241 AGLDSVASIMDNGVVLLAAHPDQRAAALAD---------PDV--------MARAVEEVLR 283
Query: 66 INTIAP-ITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPE 124
+ P E+ F I ++ L DE+ F P +F R
Sbjct: 284 TARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAAR----- 338
Query: 125 GKFDKSNPNAINFGIGRRSCAG 146
NP+ + FG G C G
Sbjct: 339 ----TPNPH-LTFGHGIWHCIG 355
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 27.2 bits (61), Expect = 3.9
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 18/117 (15%)
Query: 3 IFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
+ +AG+ET ++ +A AVL + + + +L P A + E
Sbjct: 251 LLTAGHETTTNFLAKAVLTLRAHRDVLDELRTT---------PES--------TPAAVEE 293
Query: 63 VFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+ R + E+ D+ IP+ + + L S D F +P R
Sbjct: 294 LMRYDPPVQAV-TRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHR 349
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein,
multiprotein-pigment complex, photosynthes; HET: CL1 PQN
BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP:
f.23.16.1 PDB: 3pcq_F*
Length = 164
Score = 26.5 bits (58), Expect = 4.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 140 GRRSCAGDFVAQNVMFLYVT 159
GR S AGDF+ +V+FLY+
Sbjct: 78 GRLSRAGDFLIPSVLFLYIA 97
>3mk7_C Cytochrome C oxidase, CBB3-type, subunit P; TM helices,
oxidoreductase; HET: HEM HEC FC6; 3.20A {Pseudomonas
stutzeri}
Length = 311
Score = 26.6 bits (58), Expect = 6.6
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 14 SMAFAVLYMILYPAIQT 30
++ F +LY++LYP +
Sbjct: 65 TLVFGILYLVLYPGLGN 81
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 26.4 bits (59), Expect = 7.5
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 89 IPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAG 146
I +++S + D + F +P + ER NP+ ++FG G C G
Sbjct: 308 IRAGDAVYVSYLAANRDPEVFPDPDRIDFER---------SPNPH-VSFGFGPHYCPG 355
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.138 0.426
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,110,682
Number of extensions: 175450
Number of successful extensions: 644
Number of sequences better than 10.0: 1
Number of HSP's gapped: 525
Number of HSP's successfully gapped: 80
Length of query: 199
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 110
Effective length of database: 4,216,824
Effective search space: 463850640
Effective search space used: 463850640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (24.9 bits)