RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10387
(199 letters)
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 126 bits (316), Expect = 4e-35
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSR-RPTLDDKHHLHYVQAI 59
++ AG ET ++ + +A+L+M LYP IQ ++ +E+D +G +P+ DDK + Y +A+
Sbjct: 266 GELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAV 325
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HEV R I P+ + H E+ Y IPK T + +L+S+ DEK + +P F PER
Sbjct: 326 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 385
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
FL G F K + F +GRR C G+ +A+ MFL+ T Q++ +H P+ K
Sbjct: 386 FLDSSGYFAKKEAL-VPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF-PHELVPDLK 443
Query: 180 AMSGFTTAPQPFKAIIRERY 199
G T PQP+ R+
Sbjct: 444 PRLGMTLQPQPYLICAERRH 463
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 124 bits (311), Expect = 2e-34
Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 3/201 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLG-SRRPTLDDKHHLHYVQAI 59
+ +F AG ET S+++ + L M+ YP + ++ +E+++ +G R P LDD+ + Y A+
Sbjct: 266 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 325
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
IHE+ R+ + P VPH ++T F Y IPK+T +F L S HD + FE P+ F P
Sbjct: 326 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 385
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLS-T 178
FL G K N + F +G+R C G+ +A+ +FL+ TT Q +S+ D+ T
Sbjct: 386 FLDANGAL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 444
Query: 179 KAMSGFTTAPQPFKAIIRERY 199
SG P ++ R+
Sbjct: 445 PRESGVGNVPPSYQIRFLARH 465
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 105 bits (262), Expect = 2e-27
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDK-HHLHYVQAI 59
+ AGYET SS ++F + + +P +Q KL +E+D L ++ P D + Y+ +
Sbjct: 273 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMV 332
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
++E R+ I + + C ++ FIPK ++ I ++L D K + EP KF PER
Sbjct: 333 VNETLRLFPI-AMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 391
Query: 120 FLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLST 178
F D +P FG G R+C G A M L + Q +S
Sbjct: 392 FSKKNK--DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLK 449
Query: 179 KAMSGFTTAPQPFKAIIRER 198
++ G +P + R
Sbjct: 450 LSLGGLLQPEKPVVLKVESR 469
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 102 bits (253), Expect = 4e-26
Identities = 65/200 (32%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRR-PTLDDKHHLHYVQAI 59
+D+F AG ET S+++ +A+L ++ +P + K+ +E++ +G R P + D+ H+ Y A+
Sbjct: 267 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 326
Query: 60 IHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPER 119
+HEV R + P ++PH + F +Y IPK T I ISL S+ HD K F P F P
Sbjct: 327 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 386
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDL-ST 178
FL G F KS + F G+R C G+ +A +FL++T+ Q +++ + +L +T
Sbjct: 387 FLDEGGNFKKSK-YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTT 445
Query: 179 KAMSGFTTAPQPFKAIIRER 198
++GF + P ++
Sbjct: 446 PVVNGFASVPPFYQLCFIPI 465
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 82.8 bits (203), Expect = 2e-19
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
+ AG+ET S ++FA+ +++ P + K +E L P+ L YV ++
Sbjct: 257 ITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVL 316
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF-EEPSKFKPER 119
+E R+ AP + + +Y + K + + + L D+ + ++ +F+PER
Sbjct: 317 NEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 376
Query: 120 FLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTK 179
F +P + FG G+R+C G A + L + + + D N +L K
Sbjct: 377 FENPSAIPQHAF---KPFGNGQRACIGQQFALHEATLVLGMMLKHFDF-EDHTNYELDIK 432
Query: 180 AMSGFTTAPQPFKAIIRER 198
T P+ F + +
Sbjct: 433 --ETLTLKPEGFVVKAKSK 449
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 73.4 bits (178), Expect = 5e-16
Identities = 21/124 (16%), Positives = 35/124 (28%)
Query: 75 PHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA 134
+ I + ++ S ++F +P F P R+ P + +
Sbjct: 321 MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTW 380
Query: 135 INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAPQPFKAI 194
I FG GR C G A + + ++Y QP
Sbjct: 381 IPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVR 440
Query: 195 IRER 198
R R
Sbjct: 441 YRRR 444
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 62.7 bits (151), Expect = 2e-12
Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 1/146 (0%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+ + + EV R + ++ + + K T + + L+ HD + ++
Sbjct: 266 GNSREREMFVQEVRRYYPF-GPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWD 324
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRD 170
P +F+PERF E P C G+ + VM + +
Sbjct: 325 HPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 384
Query: 171 PNNPDLSTKAMSGFTTAPQPFKAIIR 196
+ S M + I R
Sbjct: 385 EQSLHYSLARMPSLPESGFVMSGIRR 410
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 60.2 bits (144), Expect = 1e-11
Identities = 22/165 (13%), Positives = 49/165 (29%), Gaps = 28/165 (16%)
Query: 1 MDIFSAGYETLSSSMAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAII 60
+ + AG+E S + ++ +P + ++ + L
Sbjct: 234 LVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTT--- 290
Query: 61 HEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERF 120
E IP+ + + ++ + D K F +P +F R
Sbjct: 291 ---------------RFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRD 335
Query: 121 LSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
++FG G C G +A+ + + F ++
Sbjct: 336 ----------TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 370
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 59.8 bits (143), Expect = 2e-11
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 8/115 (6%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+ + E+ R +T + + + E+ D + + I S S DE+ FE
Sbjct: 263 ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFE 322
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P +F R P+ + + FG G C + +A+ + +T +QK+
Sbjct: 323 NPDEFNMNRKWPPQ--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 369
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 59.4 bits (142), Expect = 3e-11
Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 10/127 (7%)
Query: 39 HLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFIS 98
L L + + + T + + +T I + I +S
Sbjct: 282 GLSRNPEQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLS 341
Query: 99 LWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYV 158
S DE+ F P +F RF + + FG G C G +A+ M ++
Sbjct: 342 YPSANRDEEVFSNPDEFDITRFPNRH----------LGFGWGAHMCLGQHLAKLEMKIFF 391
Query: 159 TTFFQKY 165
K
Sbjct: 392 EELLPKL 398
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 55.2 bits (131), Expect = 7e-10
Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 10/116 (8%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+ + + + + + + + + I + I S + E
Sbjct: 265 GEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHE 324
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYS 166
+ F R + + FG G C G +A+ + L + + F ++
Sbjct: 325 DADTFDATRTV----------KEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFP 370
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 54.0 bits (128), Expect = 2e-09
Identities = 22/149 (14%), Positives = 43/149 (28%), Gaps = 10/149 (6%)
Query: 17 FAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITVPH 76
+ + I + + L + Q + E+ R T+ P
Sbjct: 226 CVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPR 285
Query: 77 CCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNAIN 136
E+ T I K + SL + D + + R +
Sbjct: 286 IAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR----------EPIPHVA 335
Query: 137 FGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
FG G C G +A+ + T ++++
Sbjct: 336 FGHGVHHCLGAALARLELRTVFTELWRRF 364
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 53.3 bits (126), Expect = 3e-09
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 10/114 (8%)
Query: 75 PHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA 134
E D I + ++ + + S DE+ F++P F P+R +P
Sbjct: 258 IRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPH---------- 307
Query: 135 INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRDPNNPDLSTKAMSGFTTAP 188
++FG G C G +A+ + + F +K+ V + + ++G+
Sbjct: 308 LSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNGYRKLV 361
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 52.9 bits (125), Expect = 4e-09
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
++ + EV R + I I ++ + I K M+F+ + S D F
Sbjct: 267 AEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFS 326
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P F R ++ +G G C G +A+ + V T F+++
Sbjct: 327 RPDVFDVRRD----------TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 371
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 52.9 bits (125), Expect = 5e-09
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 10/117 (8%)
Query: 50 KHHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNF 109
A++ E R +T + E+ D IP + +S +L DE+
Sbjct: 262 LSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAH 321
Query: 110 -EEPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
+F R S I+FG G C G +++ + + + ++
Sbjct: 322 GPTADRFDLTRT---------SGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 369
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 51.3 bits (121), Expect = 1e-08
Identities = 18/151 (11%), Positives = 47/151 (31%), Gaps = 10/151 (6%)
Query: 15 MAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITV 74
L + + + + L + + +++E+ R +
Sbjct: 234 GLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRYLSPVQAPN 293
Query: 75 PHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA 134
P +++ I + S+ DE +P R +
Sbjct: 294 PRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAAVSD---------- 343
Query: 135 INFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
+ FG G C G +A++++ + T ++++
Sbjct: 344 VGFGHGIHYCVGAALARSMLRMAYQTLWRRF 374
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 50.5 bits (119), Expect = 2e-08
Identities = 26/148 (17%), Positives = 45/148 (30%), Gaps = 9/148 (6%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+A + + P + L +F
Sbjct: 246 RVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFP 305
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRD 170
+ F+PERFL G FG+G+R C G A + + FF+++ +
Sbjct: 306 DGEAFRPERFLEERGTPSGRY---FPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL 362
Query: 171 PNNPDLSTKAMSGFTTAPQ-PFKAIIRE 197
P + ++ T P+ A RE
Sbjct: 363 PF-----PRVLAQVTLRPEGGLPARPRE 385
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 50.6 bits (119), Expect = 2e-08
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 12/140 (8%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+AI + I + + +E+ I +++S + D + F
Sbjct: 263 EPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP 322
Query: 111 EPSKFKPERFLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHR 169
+P + ER +PN ++FG G C G +A+ L V + +
Sbjct: 323 DPDRIDFER-----------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLK 371
Query: 170 DPNNPDLSTKAMSGFTTAPQ 189
P+ P+
Sbjct: 372 LAVAPEDVPFKKGALIRGPE 391
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 50.5 bits (119), Expect = 3e-08
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+ A + E+ RIN +P + D + K ++ + L D ++F
Sbjct: 260 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 111 EPSKFKPERFLSPEGKFDKSNPNA-INFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
P + +R NP + + FG G+ C G + + + + +K
Sbjct: 320 NPGSIELDRP----------NPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 365
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 50.2 bits (118), Expect = 4e-08
Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 10/143 (6%)
Query: 51 HHLHYVQAIIHEVFRINTIAPITVPHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFE 110
+ E + + E D I + + + + S DE+ F
Sbjct: 234 IREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 111 EPSKFKPERFLSPEGKFDKSNPNAINFGIGRRSCAGDFVAQNVMFLYVTTFFQKYSVHRD 170
+ KF P+R +P ++FG G C G +A+ + + F +++
Sbjct: 294 DGEKFIPDRNPNPH----------LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEI 343
Query: 171 PNNPDLSTKAMSGFTTAPQPFKA 193
+ + + ++G+ K+
Sbjct: 344 LDTEKVPNEVLNGYKRLVVRLKS 366
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 47.0 bits (110), Expect = 4e-07
Identities = 14/151 (9%), Positives = 37/151 (24%), Gaps = 10/151 (6%)
Query: 15 MAFAVLYMILYPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHEVFRINTIAPITV 74
+++ ++ P + + + + +
Sbjct: 228 AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVAD 287
Query: 75 PHCCMENTTFYDYFIPKDTMIFISLWSLFHDEKNFEEPSKFKPERFLSPEGKFDKSNPNA 134
+ F+ + K I + DE+ P R +
Sbjct: 288 GRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR----------QKVSH 337
Query: 135 INFGIGRRSCAGDFVAQNVMFLYVTTFFQKY 165
FG G C G +A+ + + + + +
Sbjct: 338 TTFGHGSHLCLGQHLARREIIVTLKEWLTRI 368
>d1jb0f_ f.23.16.1 (F:) Subunit III of photosystem I reaction
centre, PsaF {Synechococcus elongatus [TaxId: 32046]}
Length = 141
Score = 27.0 bits (60), Expect = 1.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 140 GRRSCAGDFVAQNVMFLYVT 159
GR S AGDF+ +V+FLY+
Sbjct: 55 GRLSRAGDFLIPSVLFLYIA 74
>d1j2ga1 d.96.1.4 (A:7-158) Urate oxidase (uricase) {Bacillus sp.,
strain TB-90 [TaxId: 1409]}
Length = 152
Score = 24.9 bits (54), Expect = 5.2
Identities = 4/38 (10%), Positives = 9/38 (23%), Gaps = 1/38 (2%)
Query: 25 YPAIQTKLHQELDEHLGSRRPTLDDKHHLHYVQAIIHE 62
Y I K+ +E + + +
Sbjct: 101 YSHI-EKISLIGEEIPFETTFAVKNGNRAASELVFKKS 137
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.138 0.426
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 772,014
Number of extensions: 35335
Number of successful extensions: 148
Number of sequences better than 10.0: 1
Number of HSP's gapped: 124
Number of HSP's successfully gapped: 28
Length of query: 199
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 118
Effective length of database: 1,295,466
Effective search space: 152864988
Effective search space used: 152864988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)