RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1039
(206 letters)
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 54.6 bits (130), Expect = 3e-10
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 10 NKLKESGNSAFKQGDYETALDFYTKA-----------LKVTAEESHERATCLKNRAAVYL 58
+KE G FK G Y A+ Y K K + N A YL
Sbjct: 16 AIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL 75
Query: 59 KQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118
K + K +E C K+L + + K L+RR +A + +FE A D + + V P NKA +
Sbjct: 76 KLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135
Query: 119 PVLSRLFAIVTKRMQENEQLQNKVHNMFK 147
+ K + NE+ + NMFK
Sbjct: 136 LQIFMCQK---KAKEHNERDRRTYANMFK 161
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 55.8 bits (133), Expect = 5e-10
Identities = 10/80 (12%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 12 LKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCS 71
E + ++ GD+E A + + + + L ++++ + + D+ +
Sbjct: 2 PMELAHREYQAGDFEAAERHCMQLWR----QEPDNTGVLLLLSSIHFQCRRLDRSAHFST 57
Query: 72 KSLEIVPDDPKALFRRCQAY 91
+++ P +A Y
Sbjct: 58 LAIKQNPLLAEAYSNLGNVY 77
Score = 52.8 bits (125), Expect = 5e-09
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ 60
+ + L N +QG+ E A+ Y KAL+V E A N A+V +Q
Sbjct: 297 ALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV----FPEFAAAHSNLASVLQQQ 352
Query: 61 NQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIG 95
+ + + +++ I P A + +
Sbjct: 353 GKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 52.8 bits (125), Expect = 5e-09
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
I+ + + N+ ++G A D Y AL++ A L N A + +Q
Sbjct: 264 IELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC----PTHADSLNNLANIKREQG 319
Query: 62 QNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114
++ + K+LE+ P+ A + GK +EA K R+ PT
Sbjct: 320 NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 372
Score = 52.8 bits (125), Expect = 6e-09
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 4/124 (3%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
+ + N + GN + ++ A+ Y + S A N A VY +Q
Sbjct: 196 VTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR----ALSLSPNHAVVHGNLACVYYEQG 251
Query: 62 QNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121
D I+ +++E+ P P A A + G EA R+ PT+ L
Sbjct: 252 LIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNL 311
Query: 122 SRLF 125
+ +
Sbjct: 312 ANIK 315
Score = 41.2 bits (95), Expect = 4e-05
Identities = 8/99 (8%), Positives = 26/99 (26%)
Query: 50 LKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHR 109
A + + C + PD+ L + + + + + +
Sbjct: 2 PMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIK 61
Query: 110 VEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKY 148
P L ++ + + E ++ + +
Sbjct: 62 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100
Score = 35.8 bits (81), Expect = 0.002
Identities = 10/65 (15%), Positives = 18/65 (27%)
Query: 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDA 104
A N V+ Q + I K++ + P+ A + F+ A
Sbjct: 167 NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAY 226
Query: 105 KHIHR 109
Sbjct: 227 LRALS 231
Score = 28.5 bits (62), Expect = 0.65
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
++ L + F+ + + F T A+K + A N VY ++
Sbjct: 26 WRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ----NPLLAEAYSNLGNVYKERG 81
Query: 62 QNDKVIEDC 70
Q + IE
Sbjct: 82 QLQEAIEHY 90
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 53.9 bits (128), Expect = 5e-10
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQ 62
D + +LK N FK DYE A+ FY++ E + A NR+ YL+
Sbjct: 4 DGALKRAEELKTQANDYFKAKDYENAIKFYSQ----AIELNPSNAIYYGNRSLAYLRTEC 59
Query: 63 NDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLS 122
+ D ++++E+ K +RR + A+GKF A D + + +V+P +K +
Sbjct: 60 YGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQ 119
Query: 123 RLFAIVTKRMQEN 135
IV ++ E
Sbjct: 120 ECNKIVKQKAFER 132
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 54.2 bits (129), Expect = 8e-10
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIED 69
+LKE GN F Y A Y +A+ + A NRA YLK Q ++ + D
Sbjct: 5 QELKEQGNRLFVGRKYPEAAACYGRAITR----NPLVAVYYTNRALCYLKMQQPEQALAD 60
Query: 70 CSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK 115
C ++LE+ KA F Q + ++EA + + + + +
Sbjct: 61 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106
Score = 32.6 bits (73), Expect = 0.020
Identities = 9/68 (13%), Positives = 22/68 (32%)
Query: 47 ATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKH 106
A LK + + + +++ P R Y + + E+A D +
Sbjct: 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 107 IHRVEPTN 114
++ +
Sbjct: 64 ALELDGQS 71
Score = 28.0 bits (61), Expect = 0.65
Identities = 9/118 (7%), Positives = 32/118 (27%), Gaps = 2/118 (1%)
Query: 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ 60
++ + G + Y+ A+ +A + + +A+ + +
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL--AKEQRLNFGDDIPSALRIAK 121
Query: 61 NQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118
+ IE+ E + + + + + + + I+
Sbjct: 122 KKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIE 179
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 51.4 bits (122), Expect = 7e-09
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 7/107 (6%)
Query: 11 KLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDC 70
L G A + D++ ALD ++ + N +Y + +
Sbjct: 7 SLWNEGVLAADKKDWKGALDAFSAVQDPHSR-------ICFNIGCMYTILKNMTEAEKAF 59
Query: 71 SKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAI 117
++S+ A F+R Y K++ A D K N+ I
Sbjct: 60 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLI 106
Score = 30.2 bits (67), Expect = 0.13
Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 17/112 (15%)
Query: 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALK------------VTAEESHERAT 48
I+ + + + G ++ Y+ A+ +AL + +
Sbjct: 62 SINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACE 121
Query: 49 CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEA 100
L N A +Y K+ + K E + + + + R + +A+ +
Sbjct: 122 VLYNIAFMYAKKEEWKKAEEQLALATSMKSEP-----RHSKIDKAMECVWKQ 168
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 51.3 bits (122), Expect = 1e-08
Identities = 11/99 (11%), Positives = 31/99 (31%), Gaps = 6/99 (6%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
+ ++ K + G + KQ + + + + CL + + +N
Sbjct: 113 FNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQH------CLVHLGDIARYRN 166
Query: 62 QNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEA 100
Q + + ++VP + + + + G
Sbjct: 167 QTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTT 205
Score = 29.0 bits (64), Expect = 0.47
Identities = 2/38 (5%), Positives = 12/38 (31%)
Query: 67 IEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDA 104
+ ++ + D + + + + ++ Y
Sbjct: 6 AQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKM 43
Score = 27.4 bits (60), Expect = 1.2
Identities = 5/125 (4%), Positives = 23/125 (18%), Gaps = 10/125 (8%)
Query: 25 YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84
++ + K A + + +++++ +
Sbjct: 65 FKNQITTLQGQAKNRANPNRSEV-QANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKS 123
Query: 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHN 144
+ V+P + + + + + Q
Sbjct: 124 SQLGIISNKQTHTSAI---------VKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESY 174
Query: 145 MFKYV 149
Sbjct: 175 YRHAA 179
Score = 26.3 bits (57), Expect = 3.2
Identities = 6/38 (15%), Positives = 16/38 (42%)
Query: 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKV 38
++ + A +GD+ T + +Y +++ V
Sbjct: 178 AAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 48.7 bits (115), Expect = 2e-08
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 11 KLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDC 70
K KE GN A+K+ D++TAL Y KA E T + N+AAVY ++ +K E C
Sbjct: 6 KEKELGNDAYKKKDFDTALKHYDKA----KELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 71 SKSLEIVPDDP-------KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118
K++E+ ++ KA R +Y K+++A T ++
Sbjct: 62 EKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLK 116
Score = 29.1 bits (64), Expect = 0.17
Identities = 11/70 (15%), Positives = 24/70 (34%)
Query: 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDA 104
++A K K+ D ++ K+ E+ P + + + Y G + +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 105 KHIHRVEPTN 114
+ V N
Sbjct: 62 EKAIEVGREN 71
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 48.1 bits (113), Expect = 3e-08
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIED 69
N+LKE GN A G+ + AL Y++A+K+ + A Q + +
Sbjct: 4 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKT 63
Query: 70 CSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFA 126
++ PD K R+ A E + +FEEA + + E N ++ L + A
Sbjct: 64 V----DLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 116
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 50.0 bits (119), Expect = 3e-08
Identities = 15/123 (12%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 16 GNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE 75
+A +G + AL+ +A+ + S + A+ + + ++ E +S++
Sbjct: 3 WKNALSEGQLQQALELLIEAI----KASPKDASLRSSFIELLCIDGDFERADEQLMQSIK 58
Query: 76 IVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQEN 135
+ P+ + +A ++ A + + + ++S ++V++ ++
Sbjct: 59 LFPEYLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQV 118
Query: 136 EQL 138
+L
Sbjct: 119 SEL 121
Score = 42.3 bits (99), Expect = 1e-05
Identities = 13/87 (14%), Positives = 24/87 (27%)
Query: 57 YLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA 116
L + Q + +E ++++ P D + G FE A ++ P
Sbjct: 6 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 65
Query: 117 IQPVLSRLFAIVTKRMQENEQLQNKVH 143
L L R +
Sbjct: 66 GASQLRHLVKAAQARKDFAQGAATAKV 92
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 48.1 bits (113), Expect = 5e-08
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Query: 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALK------------VTAEESHERATCL 50
+ + +KE GN FK+ + A+ Y +AL + ++ + +C
Sbjct: 11 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCN 70
Query: 51 KNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110
N A Y K K I+ SK L+I ++ KAL++ A G EEA + +
Sbjct: 71 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASL 130
Query: 111 EPTNKAIQPVLSRL 124
P N I+
Sbjct: 131 NPNNLDIRNSYELC 144
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 48.2 bits (113), Expect = 8e-08
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKA------------LKVTAEESHERATC 49
+D + LK GN+ FK ++E A+ YTK A+ +C
Sbjct: 20 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSC 79
Query: 50 LKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHR 109
+ N A LK + ++ C ++LEI P + KAL+RR Q ++ + ++++A D K
Sbjct: 80 VLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQE 139
Query: 110 VEPTNKAIQPVLSRLFAIVTKRMQ 133
+ P +KAIQ L ++ + +
Sbjct: 140 IAPEDKAIQAELLKVKQKIKAQKD 163
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 47.1 bits (110), Expect = 4e-07
Identities = 20/145 (13%), Positives = 45/145 (31%), Gaps = 4/145 (2%)
Query: 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQ 62
+N + D+ + E G ++GD A+ + A++ + + + + Q
Sbjct: 13 ENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQ----QDPKHMEAWQYLGTTQAENEQ 68
Query: 63 NDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLS 122
I + LE+ PD+ AL ++ +A + R P +
Sbjct: 69 ELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAE 128
Query: 123 RLFAIVTKRMQENEQLQNKVHNMFK 147
+ ++F
Sbjct: 129 EGAGGAGLGPSKRILGSLLSDSLFL 153
Score = 35.6 bits (80), Expect = 0.003
Identities = 15/140 (10%), Positives = 41/140 (29%), Gaps = 4/140 (2%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
+D D + G G+Y D A N
Sbjct: 165 LDPTSIDPDVQCGLGVLFNLSGEY----DKAVDCFTAALSVRPNDYLLWNKLGATLANGN 220
Query: 62 QNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121
Q+++ + ++LE+ P ++ + + +G EA ++ ++ +
Sbjct: 221 QSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEG 280
Query: 122 SRLFAIVTKRMQENEQLQNK 141
+ + ++ + +
Sbjct: 281 GAMSENIWSTLRLALSMLGQ 300
Score = 27.5 bits (59), Expect = 1.3
Identities = 10/83 (12%), Positives = 22/83 (26%), Gaps = 7/83 (8%)
Query: 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKV---TAEESHERA----TCLKNR 53
++ G S G + A++ + +AL + + E
Sbjct: 232 ALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTL 291
Query: 54 AAVYLKQNQNDKVIEDCSKSLEI 76
Q+D ++ L
Sbjct: 292 RLALSMLGQSDAYGAADARDLST 314
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 45.8 bits (107), Expect = 5e-07
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEES-----------HERATCLKNRAAVYL 58
+KE G FK+G Y+ AL Y K + ES R N A +L
Sbjct: 14 TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL 73
Query: 59 KQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118
K IE C+K+LE+ ++ K L RR +A+ A+ FE A D + + ++ P NKA +
Sbjct: 74 KLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133
Query: 119 PVLSRLFAIVTKRMQENEQLQNKVHNMFK 147
L+ + ++ + + NMF+
Sbjct: 134 TQLAVCQQ---RIRRQLAREKKLYANMFE 159
Score = 25.0 bits (53), Expect = 5.1
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 39 TAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAI 94
+EE E++T +K R VY K+ + + + K + + + Q +A+
Sbjct: 5 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit,
P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 41.0 bits (95), Expect = 8e-06
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 14 ESGNSAFKQGDYETALDFYTKALK---VTAEESHERATCLKNRAAVYLKQNQNDKVIEDC 70
E G A+ + DY + +AL+ + ++ + L + +Q DK +
Sbjct: 10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLT 69
Query: 71 SKSLEIVPDDPKALFRRCQAYEAIGK 96
K LE+ P+ +A + K
Sbjct: 70 KKLLELDPEHQRANGNLKYFEYIMAK 95
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 42.1 bits (97), Expect = 1e-05
Identities = 25/126 (19%), Positives = 37/126 (29%)
Query: 25 YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84
E L + L A ERA L R +Y D S++L I PD P+
Sbjct: 15 QEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVF 74
Query: 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHN 144
G F+ AY + ++PT + + L +
Sbjct: 75 NYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD 134
Query: 145 MFKYVF 150
F
Sbjct: 135 DPNDPF 140
Score = 29.8 bits (65), Expect = 0.20
Identities = 12/113 (10%), Positives = 35/113 (30%), Gaps = 2/113 (1%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
++ ND + + K + + K +++ ++ +Q
Sbjct: 132 YQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEK--SDKEQWGWNIVEFYLGNISEQT 189
Query: 62 QNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114
+++ D + + + + F + Y ++G + A K N
Sbjct: 190 LMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN 242
Score = 28.2 bits (61), Expect = 0.67
Identities = 16/90 (17%), Positives = 26/90 (28%), Gaps = 4/90 (4%)
Query: 16 GNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE 75
G G A + +++AL + + + D E LE
Sbjct: 44 GVLYDSLGLRALARNDFSQALAIRPDM----PEVFNYLGIYLTQAGNFDAAYEAFDSVLE 99
Query: 76 IVPDDPKALFRRCQAYEAIGKFEEAYTDAK 105
+ P A R A G+ + A D
Sbjct: 100 LDPTYNYAHLNRGIALYYGGRDKLAQDDLL 129
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR,
middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 179
Score = 40.6 bits (94), Expect = 3e-05
Identities = 15/107 (14%), Positives = 28/107 (26%), Gaps = 18/107 (16%)
Query: 12 LKESGNSAFKQGDYETALDFYTKALKVTAEESH------------------ERATCLKNR 53
K +G A G +E A + AL+ ++ +
Sbjct: 14 EKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAK 73
Query: 54 AAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEA 100
A + + VI + P + AY + +A
Sbjct: 74 AEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDA 120
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 39.3 bits (90), Expect = 7e-05
Identities = 20/141 (14%), Positives = 43/141 (30%), Gaps = 19/141 (13%)
Query: 12 LKESGNSAFKQGDYETALDFYTKALKVTAE--------ESHERATCLKNRAAVYLKQNQN 63
G+Y+ A +A++++ + A C A
Sbjct: 12 ALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF 71
Query: 64 DKVIEDCSKSLEIVPDDPKA-----------LFRRCQAYEAIGKFEEAYTDAKHIHRVEP 112
D+ + K+L + ++ R A + +G+ EA + K + +
Sbjct: 72 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 131
Query: 113 TNKAIQPVLSRLFAIVTKRMQ 133
K P R+ + R+
Sbjct: 132 ERKGETPGKERMMEVAIDRIA 152
Score = 25.9 bits (55), Expect = 2.7
Identities = 14/114 (12%), Positives = 28/114 (24%), Gaps = 12/114 (10%)
Query: 47 ATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD------------DPKALFRRCQAYEAI 94
A + A L + D+ +C +++EI D +A +
Sbjct: 9 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL 68
Query: 95 GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKY 148
F+EA A + +L+ +
Sbjct: 69 RSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPE 122
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 38.0 bits (86), Expect = 4e-04
Identities = 12/134 (8%), Positives = 33/134 (24%), Gaps = 4/134 (2%)
Query: 19 AFKQGDYETALDFYTKALKVTAEESH-ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI- 76
A G+ + A AL+ R V + + + + ++ ++
Sbjct: 22 AINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA 81
Query: 77 --VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQE 134
AL+ Q E + T + + + + + +
Sbjct: 82 RQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQ 141
Query: 135 NEQLQNKVHNMFKY 148
++
Sbjct: 142 LLWAWARLDEAEAS 155
Score = 28.0 bits (60), Expect = 0.80
Identities = 22/170 (12%), Positives = 53/170 (31%), Gaps = 10/170 (5%)
Query: 16 GNSAFKQGDYETALDFYTKALKVTAE--ESHERATCLKNRAAVYLKQNQNDKVIEDCSKS 73
G +G+ +L + ++ + H L ++ + Q E K+
Sbjct: 58 GEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKA 117
Query: 74 LEIVP--------DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125
+++ + R Q A + +EA A+ V + + Q +
Sbjct: 118 FQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAM 177
Query: 126 AIVTKRMQENEQLQNKVHNMFKYVFDTSAPMDKRVTAVNNLVVLAREMSG 175
I + + N + + ++ N + V+ +M+G
Sbjct: 178 LIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTG 227
Score = 25.3 bits (53), Expect = 7.2
Identities = 5/32 (15%), Positives = 8/32 (25%)
Query: 16 GNSAFKQGDYETALDFYTKALKVTAEESHERA 47
++ G A ALK+
Sbjct: 298 NQLYWQAGRKSDAQRVLLDALKLANRTGFISH 329
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 35.7 bits (81), Expect = 0.002
Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Query: 52 NRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGK-FEEAYTDAKHIHRV 110
AV + ++++ + ++E+ + R +++ K E I
Sbjct: 48 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE 107
Query: 111 EPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVF 150
+P N + L + QE E + + ++ K
Sbjct: 108 QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYH 147
Score = 31.1 bits (69), Expect = 0.069
Identities = 12/129 (9%), Positives = 34/129 (26%), Gaps = 5/129 (3%)
Query: 21 KQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQN-DKVIEDCSKSLEIVPD 79
+ E A A+++ + T R + ++ + + + +E P
Sbjct: 55 RDERSERAFKLTRDAIEL----NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK 110
Query: 80 DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQ 139
+ + R E + + I + N + E + +
Sbjct: 111 NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVD 170
Query: 140 NKVHNMFKY 148
+ +
Sbjct: 171 QLLKEDVRN 179
Score = 26.5 bits (57), Expect = 2.7
Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 7/118 (5%)
Query: 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ 60
+I+ +Y D L+F + + ++R V +
Sbjct: 104 IIEEQPKNYQVWHHRRVLVEWLRDPSQELEFI----ADILNQDAKNYHAWQHRQWVIQEF 159
Query: 61 NQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118
D ++ + L+ + +R + A V+ T + I+
Sbjct: 160 KLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGY---NDRAVLEREVQYTLEMIK 214
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 34.2 bits (77), Expect = 0.007
Identities = 7/73 (9%), Positives = 18/73 (24%), Gaps = 5/73 (6%)
Query: 9 YNKLKESGNSAFKQGDYETALDFYTKALKV--TAEESHERATCLKNRAAVYLKQNQNDKV 66
+ + + A D + KA A E + +
Sbjct: 40 CVQA---ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNA 96
Query: 67 IEDCSKSLEIVPD 79
++ +++I
Sbjct: 97 VDSLENAIQIFTH 109
Score = 28.0 bits (61), Expect = 0.78
Identities = 11/139 (7%), Positives = 34/139 (24%), Gaps = 24/139 (17%)
Query: 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSL 74
S +E A D +A A +Y + + + + K+
Sbjct: 23 KLFSGSDSYKFEEAADLCVQA------------------ATIYRLRKELNLAGDSFLKAA 64
Query: 75 EIV------PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIV 128
+ + + +++ G A ++ ++ + + F +
Sbjct: 65 DYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELG 124
Query: 129 TKRMQENEQLQNKVHNMFK 147
+ +
Sbjct: 125 EILENDLHDYAKAIDCYEL 143
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 31.6 bits (71), Expect = 0.025
Identities = 10/94 (10%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Query: 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQ 62
+ + + D + + L E+ + A + +
Sbjct: 30 SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP--KGSKEEQRDYVFYLAVGNYRLKE 87
Query: 63 NDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGK 96
+K ++ L+ P + +A +A+ K
Sbjct: 88 YEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 121
Score = 29.7 bits (66), Expect = 0.11
Identities = 13/111 (11%), Positives = 30/111 (27%), Gaps = 5/111 (4%)
Query: 17 NSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ-NQNDKVIEDCSKSLE 75
N D + A + V + + K I + L
Sbjct: 7 NELVSVEDLLKFEKKFQSEKA--AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP 64
Query: 76 IV--PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRL 124
+ +F + ++E+A + + + EP N + + +
Sbjct: 65 KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 115
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment
{Cow (Bos taurus) [TaxId: 9913]}
Length = 336
Score = 31.4 bits (71), Expect = 0.067
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 26/142 (18%)
Query: 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERA--TCLKNR---AAVYL 58
N N+ + +++ G+ + + Y+ A Y + R T + AAV
Sbjct: 10 NGPNNAH-IQQVGDRCYDEKMYDAAKLLYNNV------SNFGRLASTLVHLGEYQAAVDG 62
Query: 59 KQNQND-----KVIEDCSKSLEIVPD---------DPKALFRRCQAYEAIGKFEEAYTDA 104
+ N +V C E L Y+ G FEE T
Sbjct: 63 ARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITML 122
Query: 105 KHIHRVEPTNKAIQPVLSRLFA 126
+ +E + + L+ L++
Sbjct: 123 EAALGLERAHMGMFTELAILYS 144
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC)
{Helicobacter pylori [TaxId: 210]}
Length = 265
Score = 29.9 bits (65), Expect = 0.16
Identities = 6/32 (18%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Query: 16 GNSAFKQGDYETALDFYTKALKVTAEESHERA 47
G ++K+ D+ A ++ KA +
Sbjct: 9 GAKSYKEKDFTQAKKYFEKA----CDLKENSG 36
>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase)
{Escherichia coli [TaxId: 562]}
Length = 135
Score = 28.9 bits (63), Expect = 0.28
Identities = 16/89 (17%), Positives = 27/89 (30%)
Query: 24 DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83
D + ++DFYTK L + + E + A V + VIE + A
Sbjct: 12 DLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTA 71
Query: 84 LFRRCQAYEAIGKFEEAYTDAKHIHRVEP 112
+ + + E E
Sbjct: 72 YGHIALSVDNAAEACEKIRQNGGNVTREA 100
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 27.0 bits (60), Expect = 0.89
Identities = 10/75 (13%), Positives = 17/75 (22%), Gaps = 3/75 (4%)
Query: 22 QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81
D + T K R CL K + E ++
Sbjct: 51 VNDERLGVKILTDIYKEAESR---RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107
Query: 82 KALFRRCQAYEAIGK 96
+ + + I K
Sbjct: 108 QVGALKSMVEDKIQK 122
Score = 26.6 bits (59), Expect = 1.4
Identities = 8/50 (16%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKN 52
+ L +K G+Y A + + E ++++ LK+
Sbjct: 67 EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH--ERNNKQVGALKS 114
>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP
{Streptoalloteichus hindustanus [TaxId: 2017]}
Length = 120
Score = 26.5 bits (57), Expect = 1.4
Identities = 9/66 (13%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Query: 24 DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83
D A++F+T L + + R V L + + + +
Sbjct: 14 DVAEAVEFWTDRLGFSRVFVEDD-FAGVVRDDVTLFISAVQDQVVPDNTQAWVWVRGLDE 72
Query: 84 LFRRCQ 89
L+
Sbjct: 73 LYAEWS 78
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 26.1 bits (56), Expect = 2.9
Identities = 8/53 (15%), Positives = 17/53 (32%)
Query: 55 AVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHI 107
++ V+E S+ L PD R + + + + A +
Sbjct: 37 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALV 89
Score = 25.7 bits (55), Expect = 4.1
Identities = 8/61 (13%), Positives = 18/61 (29%), Gaps = 4/61 (6%)
Query: 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN 61
N + + + L +++ V RA L + + +L +N
Sbjct: 269 EPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP----MRAAYLDDLRSKFLLEN 324
Query: 62 Q 62
Sbjct: 325 S 325
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent
methylenetetrahydromethanopterin dehydrogenase (MTD)
{Archaeon Methanopyrus kandleri [TaxId: 2320]}
Length = 282
Score = 25.6 bits (56), Expect = 5.0
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 50 LKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHI 107
L + Q D++IE + D PK + R E +FE Y K +
Sbjct: 147 LAATGVFRVVQEAFDELIEKAKEDEISENDLPKLVIDRNTLLER-EEFENPYAMVKAM 203
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 333
Score = 25.0 bits (54), Expect = 7.8
Identities = 6/38 (15%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 148 YVFDTSAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVA 185
+ T AP ++ + ++ G +++ +GV+
Sbjct: 272 PIILTGAPAINKMLG-REVYTSNLQLGGTQIMYNNGVS 308
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 93
Score = 23.7 bits (51), Expect = 8.1
Identities = 6/44 (13%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 21 KQGDYETALDFYTKALKV-----TAEESHERATCLKNRAAVYLK 59
+ Y+ AL Y + + + + + L+ + + Y+
Sbjct: 27 AESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMD 70
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.129 0.356
Gapped
Lambda K H
0.267 0.0663 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 705,500
Number of extensions: 30481
Number of successful extensions: 188
Number of sequences better than 10.0: 1
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 74
Length of query: 206
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 125
Effective length of database: 1,295,466
Effective search space: 161933250
Effective search space used: 161933250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.6 bits)