RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10395
         (79 letters)



>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 463

 Score = 29.3 bits (64), Expect = 0.038
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 24  YKGTRRPSLEDRQYLDYAQAVISEVFRINTIAPVAAPHRCTEDTTFYNYFIPK 76
                +PS +D+  + Y +AV+ EV R   I P+   H  +ED     Y IPK
Sbjct: 305 MGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPK 357


>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 472

 Score = 26.2 bits (56), Expect = 0.48
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 33  EDRQYLDYAQAVISEVFRINTIAPVAAPHRCTEDTTFYNYFIPK 76
           +    ++Y   V++E  R+  I  +     C +D      FIPK
Sbjct: 321 DTVLQMEYLDMVVNETLRLFPI-AMRLERVCKKDVEINGMFIPK 363


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0393    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 300,158
Number of extensions: 10595
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 3
Length of query: 79
Length of database: 2,407,596
Length adjustment: 45
Effective length of query: 34
Effective length of database: 1,789,746
Effective search space: 60851364
Effective search space used: 60851364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.8 bits)