Query psy1040
Match_columns 614
No_of_seqs 402 out of 2581
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 16:56:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 4.7E-99 2E-103 832.7 42.3 519 75-612 2-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 2.5E-96 9E-101 811.8 37.8 524 73-613 17-579 (583)
3 3q9t_A Choline dehydrogenase a 100.0 3.2E-94 1.1E-98 795.9 41.6 516 73-614 4-574 (577)
4 1gpe_A Protein (glucose oxidas 100.0 7.4E-88 2.5E-92 750.8 37.9 523 73-613 22-583 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 2.9E-85 9.8E-90 725.1 46.2 506 74-613 12-530 (546)
6 3t37_A Probable dehydrogenase; 100.0 2.8E-85 9.4E-90 726.0 42.1 502 73-612 15-523 (526)
7 1ju2_A HydroxynitrIle lyase; f 100.0 7.8E-75 2.7E-79 640.2 32.0 475 73-613 24-518 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 1.6E-70 5.5E-75 609.4 34.1 487 73-614 5-544 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 2.7E-66 9.2E-71 568.9 30.0 453 73-614 3-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 7.9E-65 2.7E-69 557.4 28.4 450 73-613 9-505 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 2.5E-50 8.6E-55 450.9 30.9 482 74-614 45-614 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 1.5E-14 5E-19 158.6 18.4 63 276-341 208-271 (510)
13 4dgk_A Phytoene dehydrogenase; 99.5 1.6E-12 5.5E-17 142.0 20.1 58 276-341 227-284 (501)
14 1qo8_A Flavocytochrome C3 fuma 99.4 9.1E-13 3.1E-17 146.2 14.4 61 276-340 256-317 (566)
15 1y0p_A Fumarate reductase flav 99.4 1.3E-12 4.5E-17 145.1 12.4 61 275-338 260-320 (571)
16 2h88_A Succinate dehydrogenase 99.3 1.4E-11 4.7E-16 137.2 14.2 56 278-336 163-218 (621)
17 3dme_A Conserved exported prot 99.3 1.2E-11 4.1E-16 129.0 11.8 62 277-345 157-219 (369)
18 2bs2_A Quinol-fumarate reducta 99.3 2.9E-11 9.8E-16 135.5 15.1 55 279-336 167-221 (660)
19 1y56_B Sarcosine oxidase; dehy 99.3 9.8E-12 3.3E-16 130.7 10.3 59 277-345 156-214 (382)
20 1d4d_A Flavocytochrome C fumar 99.3 3.1E-11 1.1E-15 133.8 14.1 63 275-341 260-324 (572)
21 3da1_A Glycerol-3-phosphate de 99.3 1.8E-11 6.1E-16 135.3 12.0 64 279-346 179-242 (561)
22 2wdq_A Succinate dehydrogenase 99.2 5.6E-11 1.9E-15 131.9 16.0 57 278-336 151-207 (588)
23 2gag_B Heterotetrameric sarcos 99.2 1.9E-11 6.6E-16 129.4 11.6 59 277-345 181-239 (405)
24 1chu_A Protein (L-aspartate ox 99.2 6.6E-11 2.3E-15 130.1 16.1 57 278-336 147-209 (540)
25 3nyc_A D-arginine dehydrogenas 99.2 1.3E-11 4.3E-16 129.6 9.5 36 73-110 7-42 (381)
26 2rgh_A Alpha-glycerophosphate 99.2 1.4E-10 4.8E-15 128.4 15.7 62 280-345 198-259 (571)
27 2oln_A NIKD protein; flavoprot 99.2 6.4E-11 2.2E-15 125.2 11.5 36 74-110 3-38 (397)
28 3gyx_A Adenylylsulfate reducta 99.2 4.5E-11 1.5E-15 133.9 10.7 52 284-336 182-234 (662)
29 3dje_A Fructosyl amine: oxygen 99.2 3.9E-11 1.3E-15 128.6 9.8 56 276-340 167-225 (438)
30 1jnr_A Adenylylsulfate reducta 99.1 2.6E-10 9.1E-15 128.0 13.9 57 277-336 158-219 (643)
31 2gf3_A MSOX, monomeric sarcosi 99.1 2.1E-10 7.2E-15 120.6 11.6 35 75-110 3-37 (389)
32 1kf6_A Fumarate reductase flav 99.1 7.2E-10 2.5E-14 123.3 16.3 54 281-337 146-199 (602)
33 1pj5_A N,N-dimethylglycine oxi 99.1 2.5E-10 8.5E-15 132.3 12.8 59 277-345 158-216 (830)
34 3axb_A Putative oxidoreductase 99.1 1.2E-10 4E-15 125.3 7.7 34 74-108 22-56 (448)
35 3ps9_A TRNA 5-methylaminomethy 99.1 5.8E-10 2E-14 126.3 12.6 36 74-110 271-306 (676)
36 2qcu_A Aerobic glycerol-3-phos 99.0 1.4E-09 4.7E-14 118.7 14.4 58 279-341 158-215 (501)
37 3pvc_A TRNA 5-methylaminomethy 99.0 1.1E-09 3.7E-14 124.2 12.4 36 74-110 263-298 (689)
38 2i0z_A NAD(FAD)-utilizing dehy 99.0 2E-10 6.8E-15 123.6 5.8 55 276-338 140-194 (447)
39 1rp0_A ARA6, thiazole biosynth 99.0 2.3E-09 7.9E-14 107.9 12.1 37 74-110 38-74 (284)
40 1ryi_A Glycine oxidase; flavop 99.0 2.1E-10 7.1E-15 120.4 4.4 37 73-110 15-51 (382)
41 2uzz_A N-methyl-L-tryptophan o 99.0 4.7E-09 1.6E-13 109.6 14.5 35 75-110 2-36 (372)
42 3oz2_A Digeranylgeranylglycero 98.9 3.8E-09 1.3E-13 110.8 11.8 57 275-337 107-163 (397)
43 3cgv_A Geranylgeranyl reductas 98.9 1.1E-08 3.8E-13 107.6 13.1 56 275-335 107-162 (397)
44 3nlc_A Uncharacterized protein 98.9 4.3E-09 1.5E-13 115.1 10.2 55 276-338 226-280 (549)
45 3jsk_A Cypbp37 protein; octame 98.8 8.8E-09 3E-13 105.3 10.8 37 74-110 78-115 (344)
46 3ka7_A Oxidoreductase; structu 98.8 3.5E-09 1.2E-13 112.8 7.9 57 276-341 202-258 (425)
47 3v76_A Flavoprotein; structura 98.8 1.6E-09 5.6E-14 115.0 5.3 38 73-111 25-62 (417)
48 2e5v_A L-aspartate oxidase; ar 98.8 1.1E-08 3.6E-13 110.7 11.3 49 279-335 128-176 (472)
49 3atr_A Conserved archaeal prot 98.7 2E-08 6.7E-13 108.1 9.9 58 276-336 106-163 (453)
50 3e1t_A Halogenase; flavoprotei 98.7 5.4E-08 1.8E-12 106.4 12.9 57 275-335 116-172 (512)
51 2zxi_A TRNA uridine 5-carboxym 98.7 1.4E-08 4.8E-13 111.6 7.5 35 74-109 26-60 (637)
52 2gjc_A Thiazole biosynthetic e 98.7 6.1E-08 2.1E-12 98.5 11.2 37 74-110 64-101 (326)
53 3ces_A MNMG, tRNA uridine 5-ca 98.7 3.8E-08 1.3E-12 108.6 10.1 35 74-109 27-61 (651)
54 2gqf_A Hypothetical protein HI 98.7 1.9E-08 6.6E-13 106.3 7.5 35 75-110 4-38 (401)
55 3nix_A Flavoprotein/dehydrogen 98.7 6.6E-08 2.3E-12 102.7 10.7 36 74-110 4-39 (421)
56 3nrn_A Uncharacterized protein 98.6 1E-07 3.5E-12 101.4 10.2 34 77-111 2-35 (421)
57 3c4n_A Uncharacterized protein 98.6 1.8E-08 6.1E-13 106.8 4.0 37 74-110 35-72 (405)
58 2gmh_A Electron transfer flavo 98.6 1.1E-07 3.6E-12 105.6 9.4 59 275-336 149-218 (584)
59 3i3l_A Alkylhalidase CMLS; fla 98.6 1.2E-07 4.3E-12 104.9 9.6 55 275-334 133-187 (591)
60 3cp8_A TRNA uridine 5-carboxym 98.5 1.5E-07 5.2E-12 103.8 9.0 36 73-109 19-54 (641)
61 3ihg_A RDME; flavoenzyme, anth 98.5 1E-06 3.5E-11 96.8 14.8 36 74-110 4-39 (535)
62 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 1E-07 3.5E-12 98.4 5.4 34 76-110 2-38 (342)
63 1yvv_A Amine oxidase, flavin-c 98.4 1.5E-07 5.1E-12 96.6 6.1 36 75-111 2-37 (336)
64 2qa1_A PGAE, polyketide oxygen 98.4 1.4E-06 4.9E-11 94.6 13.6 37 73-110 9-45 (500)
65 2cul_A Glucose-inhibited divis 98.4 6.8E-07 2.3E-11 86.9 9.2 33 75-108 3-35 (232)
66 4a9w_A Monooxygenase; baeyer-v 98.4 3.5E-07 1.2E-11 94.3 7.3 35 75-110 3-37 (357)
67 2bry_A NEDD9 interacting prote 98.4 1.6E-07 5.5E-12 102.1 4.8 37 73-110 90-126 (497)
68 2qa2_A CABE, polyketide oxygen 98.4 1.7E-06 5.8E-11 94.1 12.7 37 73-110 10-46 (499)
69 3f8d_A Thioredoxin reductase ( 98.4 9.5E-07 3.3E-11 89.7 9.6 67 275-345 195-261 (323)
70 3kkj_A Amine oxidase, flavin-c 98.3 2.1E-07 7.1E-12 91.3 4.1 36 75-111 2-37 (336)
71 3itj_A Thioredoxin reductase 1 98.3 8.1E-07 2.8E-11 90.9 8.4 62 276-340 215-276 (338)
72 1k0i_A P-hydroxybenzoate hydro 98.3 1.9E-07 6.6E-12 98.2 3.7 35 75-110 2-36 (394)
73 2x3n_A Probable FAD-dependent 98.3 9.4E-07 3.2E-11 93.1 8.8 36 74-110 5-40 (399)
74 3lxd_A FAD-dependent pyridine 98.3 8.7E-06 3E-10 86.2 15.7 64 275-346 199-262 (415)
75 3s5w_A L-ornithine 5-monooxyge 98.3 1.2E-06 4.1E-11 94.3 8.6 37 74-111 29-70 (463)
76 3fmw_A Oxygenase; mithramycin, 98.3 2.2E-06 7.4E-11 94.7 10.8 36 74-110 48-83 (570)
77 3r9u_A Thioredoxin reductase; 98.3 8.5E-06 2.9E-10 82.3 14.0 62 275-340 188-249 (315)
78 2r0c_A REBC; flavin adenine di 98.2 4.9E-06 1.7E-10 91.6 12.6 36 74-110 25-60 (549)
79 2dkh_A 3-hydroxybenzoate hydro 98.2 2.1E-06 7.3E-11 96.2 8.9 36 74-110 31-67 (639)
80 3lzw_A Ferredoxin--NADP reduct 98.2 3.5E-06 1.2E-10 85.9 9.8 35 75-110 7-41 (332)
81 2gv8_A Monooxygenase; FMO, FAD 98.2 2.1E-06 7E-11 92.1 8.2 37 74-111 5-43 (447)
82 3fg2_P Putative rubredoxin red 98.1 6.1E-06 2.1E-10 87.1 9.5 64 275-346 189-252 (404)
83 3gwf_A Cyclohexanone monooxyge 98.1 4.9E-06 1.7E-10 91.2 9.0 36 74-110 7-43 (540)
84 4ap3_A Steroid monooxygenase; 98.1 4.3E-06 1.5E-10 91.8 8.1 37 73-110 19-55 (549)
85 3fpz_A Thiazole biosynthetic e 98.1 1.7E-06 5.9E-11 88.6 4.4 39 73-111 63-102 (326)
86 2xve_A Flavin-containing monoo 98.1 7.3E-06 2.5E-10 88.2 9.4 64 275-340 106-171 (464)
87 4fk1_A Putative thioredoxin re 98.1 1.6E-06 5.5E-11 87.8 3.9 36 73-109 4-39 (304)
88 4gde_A UDP-galactopyranose mut 98.1 1.4E-06 4.9E-11 94.8 3.4 41 73-113 8-48 (513)
89 3uox_A Otemo; baeyer-villiger 98.0 8.6E-06 2.9E-10 89.4 9.5 36 74-110 8-43 (545)
90 4gcm_A TRXR, thioredoxin reduc 98.0 1.8E-06 6.3E-11 87.5 3.9 34 74-108 5-38 (312)
91 2bcg_G Secretory pathway GDP d 98.0 3.8E-06 1.3E-10 90.1 4.8 40 73-113 9-48 (453)
92 4a5l_A Thioredoxin reductase; 97.9 3.2E-06 1.1E-10 85.6 3.4 35 74-109 3-37 (314)
93 4b63_A L-ornithine N5 monooxyg 97.9 4.1E-05 1.4E-09 83.2 10.7 59 274-333 149-212 (501)
94 1c0p_A D-amino acid oxidase; a 97.9 7.9E-06 2.7E-10 84.8 4.7 37 73-110 4-40 (363)
95 3k7m_X 6-hydroxy-L-nicotine ox 97.8 6.1E-06 2.1E-10 87.7 3.5 35 76-111 2-36 (431)
96 3rp8_A Flavoprotein monooxygen 97.8 9E-06 3.1E-10 85.8 4.2 37 73-110 21-57 (407)
97 3p1w_A Rabgdi protein; GDI RAB 97.8 9.7E-06 3.3E-10 86.7 4.3 40 73-113 18-57 (475)
98 3h28_A Sulfide-quinone reducta 97.8 0.00019 6.6E-09 76.2 13.8 35 76-111 3-39 (430)
99 1v0j_A UDP-galactopyranose mut 97.7 1.5E-05 5.2E-10 84.0 3.9 40 73-112 5-44 (399)
100 1i8t_A UDP-galactopyranose mut 97.7 1.6E-05 5.5E-10 82.7 4.1 37 75-112 1-37 (367)
101 3hdq_A UDP-galactopyranose mut 97.7 2.1E-05 7.1E-10 82.4 4.3 39 73-112 27-65 (397)
102 3lad_A Dihydrolipoamide dehydr 97.7 1.5E-05 5E-10 86.1 3.2 36 74-110 2-37 (476)
103 3g3e_A D-amino-acid oxidase; F 97.7 1.4E-05 4.9E-10 82.4 2.9 32 77-109 2-39 (351)
104 3o0h_A Glutathione reductase; 97.6 2.3E-05 7.9E-10 84.7 4.0 34 74-108 25-58 (484)
105 2xdo_A TETX2 protein; tetracyc 97.6 2.9E-05 1E-09 81.6 4.7 36 74-110 25-60 (398)
106 2jae_A L-amino acid oxidase; o 97.6 3.3E-05 1.1E-09 83.6 4.8 39 73-112 9-47 (489)
107 2ivd_A PPO, PPOX, protoporphyr 97.6 2.7E-05 9.1E-10 83.9 4.0 39 73-112 14-52 (478)
108 2b9w_A Putative aminooxidase; 97.6 3.2E-05 1.1E-09 81.9 4.5 38 74-112 5-43 (424)
109 4b1b_A TRXR, thioredoxin reduc 97.6 3E-05 1E-09 84.7 4.3 36 74-110 41-76 (542)
110 3alj_A 2-methyl-3-hydroxypyrid 97.6 3E-05 1E-09 80.9 4.2 35 75-110 11-45 (379)
111 1d5t_A Guanine nucleotide diss 97.6 4E-05 1.4E-09 81.6 4.8 39 73-112 4-42 (433)
112 4dna_A Probable glutathione re 97.6 3.4E-05 1.2E-09 82.9 4.2 34 74-108 4-37 (463)
113 3c96_A Flavin-containing monoo 97.6 3.2E-05 1.1E-09 81.6 3.9 35 75-110 4-39 (410)
114 3dgh_A TRXR-1, thioredoxin red 97.6 3.4E-05 1.2E-09 83.4 4.2 62 276-340 233-294 (483)
115 3i6d_A Protoporphyrinogen oxid 97.6 2.2E-05 7.4E-10 84.2 2.5 37 75-112 5-47 (470)
116 1s3e_A Amine oxidase [flavin-c 97.6 3.4E-05 1.2E-09 84.2 4.0 38 74-112 3-40 (520)
117 1rsg_A FMS1 protein; FAD bindi 97.6 2.8E-05 9.7E-10 84.8 3.3 38 74-112 7-45 (516)
118 2vou_A 2,6-dihydroxypyridine h 97.5 4.1E-05 1.4E-09 80.5 4.3 36 74-110 4-39 (397)
119 3nks_A Protoporphyrinogen oxid 97.5 3.7E-05 1.3E-09 82.7 4.1 36 76-112 3-40 (477)
120 2yg5_A Putrescine oxidase; oxi 97.5 3.6E-05 1.2E-09 82.3 3.9 38 74-112 4-41 (453)
121 3ic9_A Dihydrolipoamide dehydr 97.5 3.9E-05 1.3E-09 83.2 3.9 34 75-109 8-41 (492)
122 3urh_A Dihydrolipoyl dehydroge 97.5 4.1E-05 1.4E-09 82.9 4.1 66 276-345 245-312 (491)
123 3cty_A Thioredoxin reductase; 97.5 4.2E-05 1.4E-09 77.6 3.7 35 73-108 14-48 (319)
124 2vvm_A Monoamine oxidase N; FA 97.5 3.8E-05 1.3E-09 83.2 3.5 38 74-112 38-75 (495)
125 3fbs_A Oxidoreductase; structu 97.5 4.4E-05 1.5E-09 76.3 3.7 34 75-109 2-35 (297)
126 2ywl_A Thioredoxin reductase r 97.5 4.7E-05 1.6E-09 70.3 3.6 33 76-109 2-34 (180)
127 3dgz_A Thioredoxin reductase 2 97.5 4.1E-05 1.4E-09 82.8 3.6 61 276-339 231-291 (488)
128 2e1m_A L-glutamate oxidase; L- 97.5 5.5E-05 1.9E-09 78.6 4.2 38 73-111 42-80 (376)
129 3l8k_A Dihydrolipoyl dehydroge 97.5 4.7E-05 1.6E-09 81.9 3.8 36 75-111 4-39 (466)
130 3ihm_A Styrene monooxygenase A 97.5 4.1E-05 1.4E-09 81.4 3.2 34 75-109 22-55 (430)
131 1sez_A Protoporphyrinogen oxid 97.5 6.2E-05 2.1E-09 81.7 4.6 38 74-112 12-49 (504)
132 3ab1_A Ferredoxin--NADP reduct 97.5 5.8E-05 2E-09 78.0 4.1 37 74-111 13-49 (360)
133 2aqj_A Tryptophan halogenase, 97.4 5.8E-05 2E-09 82.8 3.9 36 74-110 4-42 (538)
134 2zbw_A Thioredoxin reductase; 97.4 6.4E-05 2.2E-09 76.7 3.9 36 74-110 4-39 (335)
135 3dk9_A Grase, GR, glutathione 97.4 6.3E-05 2.1E-09 81.2 3.7 35 74-109 19-53 (478)
136 2q7v_A Thioredoxin reductase; 97.4 6E-05 2.1E-09 76.6 3.4 34 74-108 7-40 (325)
137 3qfa_A Thioredoxin reductase 1 97.4 7E-05 2.4E-09 81.7 4.1 36 73-109 30-65 (519)
138 3g5s_A Methylenetetrahydrofola 97.4 8E-05 2.7E-09 76.7 3.8 35 76-111 2-36 (443)
139 2hqm_A GR, grase, glutathione 97.4 7.6E-05 2.6E-09 80.5 3.7 35 74-109 10-44 (479)
140 2q0l_A TRXR, thioredoxin reduc 97.4 7.6E-05 2.6E-09 75.3 3.5 32 76-108 2-34 (311)
141 2qae_A Lipoamide, dihydrolipoy 97.4 8.3E-05 2.8E-09 80.0 3.9 36 75-111 2-37 (468)
142 2weu_A Tryptophan 5-halogenase 97.4 5.1E-05 1.7E-09 82.6 2.3 34 76-110 3-39 (511)
143 1ges_A Glutathione reductase; 97.4 8.4E-05 2.9E-09 79.5 3.9 35 74-109 3-37 (450)
144 2yqu_A 2-oxoglutarate dehydrog 97.4 8E-05 2.7E-09 79.8 3.7 36 75-111 1-36 (455)
145 2bi7_A UDP-galactopyranose mut 97.4 0.00011 3.8E-09 76.8 4.7 37 75-112 3-39 (384)
146 1mo9_A ORF3; nucleotide bindin 97.4 9.9E-05 3.4E-09 80.6 4.4 67 275-345 260-327 (523)
147 3lov_A Protoporphyrinogen oxid 97.4 7E-05 2.4E-09 80.6 3.2 36 75-111 4-41 (475)
148 1fl2_A Alkyl hydroperoxide red 97.4 8.9E-05 3.1E-09 74.7 3.8 32 75-107 1-32 (310)
149 1onf_A GR, grase, glutathione 97.3 8.9E-05 3E-09 80.5 3.9 34 75-109 2-35 (500)
150 3d1c_A Flavin-containing putat 97.3 8.7E-05 3E-09 76.8 3.7 34 75-109 4-38 (369)
151 2r9z_A Glutathione amide reduc 97.3 9.2E-05 3.1E-09 79.5 3.9 35 74-109 3-37 (463)
152 2e4g_A Tryptophan halogenase; 97.3 0.00011 3.8E-09 80.7 4.5 36 74-110 24-62 (550)
153 1w4x_A Phenylacetone monooxyge 97.3 0.00012 4E-09 80.3 4.6 38 73-111 14-51 (542)
154 1dxl_A Dihydrolipoamide dehydr 97.3 8.7E-05 3E-09 79.8 3.4 38 73-111 4-41 (470)
155 1v59_A Dihydrolipoamide dehydr 97.3 9.6E-05 3.3E-09 79.7 3.7 37 74-111 4-40 (478)
156 3c4a_A Probable tryptophan hyd 97.3 9.8E-05 3.4E-09 77.1 3.5 34 77-110 2-36 (381)
157 1trb_A Thioredoxin reductase; 97.3 9.3E-05 3.2E-09 74.9 3.1 34 74-108 4-37 (320)
158 1zk7_A HGII, reductase, mercur 97.3 0.00012 4.1E-09 78.7 4.1 34 74-108 3-36 (467)
159 1ojt_A Surface protein; redox- 97.3 0.00011 3.7E-09 79.4 3.7 38 73-111 4-41 (482)
160 1ebd_A E3BD, dihydrolipoamide 97.3 0.0001 3.5E-09 79.0 3.4 33 75-108 3-35 (455)
161 4dsg_A UDP-galactopyranose mut 97.3 0.00014 4.7E-09 78.6 4.4 38 74-112 8-46 (484)
162 2pyx_A Tryptophan halogenase; 97.3 0.00011 3.7E-09 80.3 3.6 36 74-110 6-53 (526)
163 2a8x_A Dihydrolipoyl dehydroge 97.3 0.00011 3.7E-09 79.0 3.4 33 75-108 3-35 (464)
164 1zmd_A Dihydrolipoyl dehydroge 97.3 0.00011 3.8E-09 79.1 3.5 37 74-111 5-41 (474)
165 4hb9_A Similarities with proba 97.3 0.00013 4.6E-09 76.4 4.0 33 77-110 3-35 (412)
166 1lvl_A Dihydrolipoamide dehydr 97.3 0.0001 3.5E-09 79.0 3.1 35 73-108 3-37 (458)
167 1vdc_A NTR, NADPH dependent th 97.2 9.9E-05 3.4E-09 75.2 2.7 32 75-107 8-39 (333)
168 1fec_A Trypanothione reductase 97.2 0.00011 3.9E-09 79.4 3.3 31 75-106 3-34 (490)
169 4gut_A Lysine-specific histone 97.2 0.0003 1E-08 80.1 6.5 38 74-112 335-372 (776)
170 2iid_A L-amino-acid oxidase; f 97.2 0.00014 4.7E-09 78.8 3.4 38 74-112 32-69 (498)
171 1pn0_A Phenol 2-monooxygenase; 97.2 0.00015 5.1E-09 81.4 3.8 36 74-110 7-47 (665)
172 2a87_A TRXR, TR, thioredoxin r 97.2 0.00012 4E-09 74.9 2.6 35 73-108 12-46 (335)
173 2eq6_A Pyruvate dehydrogenase 97.2 0.00015 5.2E-09 77.8 3.6 34 75-109 6-39 (464)
174 1b37_A Protein (polyamine oxid 97.1 0.00021 7E-09 76.9 3.8 38 74-112 3-41 (472)
175 3k30_A Histamine dehydrogenase 97.1 0.00024 8.3E-09 80.2 4.1 39 73-112 389-427 (690)
176 2x8g_A Thioredoxin glutathione 97.1 0.00022 7.5E-09 79.2 3.6 35 73-108 105-139 (598)
177 2vdc_G Glutamate synthase [NAD 97.1 0.00024 8.2E-09 76.0 3.7 38 73-111 120-157 (456)
178 1vg0_A RAB proteins geranylger 97.1 0.00033 1.1E-08 77.3 4.8 40 73-113 6-45 (650)
179 2wpf_A Trypanothione reductase 97.1 0.00019 6.4E-09 77.8 2.6 33 74-107 6-39 (495)
180 2z3y_A Lysine-specific histone 97.0 0.00087 3E-08 75.2 7.8 39 73-112 105-143 (662)
181 1xdi_A RV3303C-LPDA; reductase 97.0 0.00024 8.2E-09 77.0 3.1 35 75-109 2-38 (499)
182 1hyu_A AHPF, alkyl hydroperoxi 97.0 0.00031 1.1E-08 76.6 3.7 34 73-107 210-243 (521)
183 2xag_A Lysine-specific histone 96.9 0.0015 5.1E-08 75.0 8.6 39 73-112 276-314 (852)
184 1xhc_A NADH oxidase /nitrite r 96.9 0.00054 1.9E-08 71.1 4.0 35 75-111 8-42 (367)
185 2cdu_A NADPH oxidase; flavoenz 96.9 0.00044 1.5E-08 73.9 3.4 57 275-340 196-252 (452)
186 2v3a_A Rubredoxin reductase; a 96.8 0.00062 2.1E-08 71.0 4.3 62 275-345 192-253 (384)
187 1q1r_A Putidaredoxin reductase 96.8 0.00065 2.2E-08 72.1 4.4 64 276-345 197-260 (431)
188 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.00073 2.5E-08 76.0 4.8 38 73-111 371-408 (671)
189 1o94_A Tmadh, trimethylamine d 96.8 0.00066 2.3E-08 77.1 4.2 38 73-111 387-424 (729)
190 2bc0_A NADH oxidase; flavoprot 96.8 0.00045 1.5E-08 74.7 2.7 36 75-111 35-73 (490)
191 3oc4_A Oxidoreductase, pyridin 96.8 0.00064 2.2E-08 72.6 3.6 37 76-112 3-40 (452)
192 2gag_A Heterotetrameric sarcos 96.7 0.00065 2.2E-08 79.5 3.8 63 280-344 326-392 (965)
193 1y56_A Hypothetical protein PH 96.7 0.00055 1.9E-08 74.0 2.8 59 278-345 265-323 (493)
194 1fl2_A Alkyl hydroperoxide red 96.7 0.0065 2.2E-07 60.8 10.6 55 283-340 193-247 (310)
195 3cgb_A Pyridine nucleotide-dis 96.7 0.0007 2.4E-08 72.9 3.4 37 75-111 36-73 (480)
196 3iwa_A FAD-dependent pyridine 96.7 0.00075 2.6E-08 72.5 3.6 62 275-345 207-268 (472)
197 1trb_A Thioredoxin reductase; 96.7 0.0057 1.9E-07 61.5 9.8 57 281-340 195-252 (320)
198 2gqw_A Ferredoxin reductase; f 96.7 0.00085 2.9E-08 70.6 3.8 58 275-345 192-249 (408)
199 3kd9_A Coenzyme A disulfide re 96.7 0.00092 3.1E-08 71.3 4.0 37 75-111 3-40 (449)
200 3h8l_A NADH oxidase; membrane 96.7 0.00073 2.5E-08 71.1 3.1 34 77-111 3-39 (409)
201 3ab1_A Ferredoxin--NADP reduct 96.6 0.0086 2.9E-07 61.4 11.0 59 282-344 214-272 (360)
202 1nhp_A NADH peroxidase; oxidor 96.6 0.00082 2.8E-08 71.7 3.3 36 76-111 1-37 (447)
203 2q0l_A TRXR, thioredoxin reduc 96.6 0.01 3.5E-07 59.3 11.1 58 282-342 191-248 (311)
204 3cty_A Thioredoxin reductase; 96.6 0.005 1.7E-07 62.0 8.7 60 283-345 203-262 (319)
205 1m6i_A Programmed cell death p 96.6 0.0011 3.8E-08 71.7 3.8 62 275-345 231-292 (493)
206 3sx6_A Sulfide-quinone reducta 96.5 0.0013 4.6E-08 69.8 3.8 36 75-111 4-42 (437)
207 1mo9_A ORF3; nucleotide bindin 96.4 0.016 5.4E-07 63.0 12.1 34 76-110 215-248 (523)
208 2eq6_A Pyruvate dehydrogenase 96.4 0.0089 3E-07 63.9 9.8 34 76-110 170-203 (464)
209 1cjc_A Protein (adrenodoxin re 96.4 0.0014 4.8E-08 70.1 3.4 37 74-111 5-43 (460)
210 1gte_A Dihydropyrimidine dehyd 96.4 0.0016 5.5E-08 76.7 4.2 37 74-111 186-223 (1025)
211 3ics_A Coenzyme A-disulfide re 96.4 0.0016 5.5E-08 72.0 3.8 40 73-112 34-74 (588)
212 1vdc_A NTR, NADPH dependent th 96.3 0.018 6E-07 58.2 11.0 59 281-340 206-264 (333)
213 1q1r_A Putidaredoxin reductase 96.3 0.0089 3E-07 63.2 9.0 34 76-110 150-183 (431)
214 1v59_A Dihydrolipoamide dehydr 96.3 0.0083 2.8E-07 64.4 8.7 56 281-338 235-290 (478)
215 2v3a_A Rubredoxin reductase; a 96.3 0.011 3.7E-07 61.5 9.2 34 76-110 146-179 (384)
216 3ef6_A Toluene 1,2-dioxygenase 96.2 0.0025 8.5E-08 67.1 3.9 62 275-345 190-251 (410)
217 3ef6_A Toluene 1,2-dioxygenase 96.2 0.0077 2.6E-07 63.3 7.5 34 76-110 144-177 (410)
218 2q7v_A Thioredoxin reductase; 96.1 0.028 9.5E-07 56.6 11.2 55 282-340 200-254 (325)
219 3ntd_A FAD-dependent pyridine 96.1 0.0027 9.3E-08 69.7 3.5 37 76-112 2-39 (565)
220 1hyu_A AHPF, alkyl hydroperoxi 96.1 0.019 6.4E-07 62.4 10.1 55 283-340 404-458 (521)
221 1lqt_A FPRA; NADP+ derivative, 96.0 0.0023 7.9E-08 68.4 2.7 37 75-111 3-45 (456)
222 3ayj_A Pro-enzyme of L-phenyla 96.0 0.002 6.9E-08 72.0 2.1 37 74-111 55-100 (721)
223 1zmd_A Dihydrolipoyl dehydroge 95.9 0.028 9.5E-07 60.2 10.5 62 281-345 231-294 (474)
224 1ebd_A E3BD, dihydrolipoamide 95.9 0.029 9.9E-07 59.7 10.5 34 76-110 171-204 (455)
225 3s5w_A L-ornithine 5-monooxyge 95.9 0.11 3.7E-06 55.1 14.9 53 280-336 326-378 (463)
226 4eqs_A Coenzyme A disulfide re 95.9 0.0043 1.5E-07 65.9 3.7 33 78-111 3-37 (437)
227 2zbw_A Thioredoxin reductase; 95.8 0.05 1.7E-06 54.8 11.6 61 281-345 202-262 (335)
228 3ic9_A Dihydrolipoamide dehydr 95.8 0.024 8.3E-07 61.0 9.5 50 285-339 229-278 (492)
229 3vrd_B FCCB subunit, flavocyto 95.8 0.0043 1.5E-07 64.8 3.3 61 276-346 208-268 (401)
230 3urh_A Dihydrolipoyl dehydroge 95.8 0.038 1.3E-06 59.4 10.9 33 77-110 200-232 (491)
231 3cgb_A Pyridine nucleotide-dis 95.7 0.0079 2.7E-07 64.6 5.4 33 76-109 187-219 (480)
232 2qae_A Lipoamide, dihydrolipoy 95.7 0.039 1.3E-06 58.9 10.5 60 281-345 227-288 (468)
233 2a8x_A Dihydrolipoyl dehydroge 95.7 0.032 1.1E-06 59.5 9.7 58 282-345 224-283 (464)
234 3klj_A NAD(FAD)-dependent dehy 95.6 0.0084 2.9E-07 62.5 4.8 39 73-112 7-45 (385)
235 2gqw_A Ferredoxin reductase; f 95.6 0.03 1E-06 58.6 9.0 34 76-110 146-179 (408)
236 2hqm_A GR, grase, glutathione 95.6 0.019 6.3E-07 61.7 7.4 59 281-345 237-296 (479)
237 3lzw_A Ferredoxin--NADP reduct 95.2 0.035 1.2E-06 55.8 7.8 59 283-345 202-260 (332)
238 4g6h_A Rotenone-insensitive NA 95.2 0.012 4.2E-07 63.5 4.4 36 74-110 41-76 (502)
239 3dgh_A TRXR-1, thioredoxin red 95.2 0.065 2.2E-06 57.4 10.0 31 77-108 189-219 (483)
240 1dxl_A Dihydrolipoamide dehydr 95.1 0.019 6.4E-07 61.4 5.7 55 281-339 229-283 (470)
241 3dgz_A Thioredoxin reductase 2 95.1 0.075 2.6E-06 57.0 10.5 31 77-108 187-217 (488)
242 2cdu_A NADPH oxidase; flavoenz 95.1 0.04 1.4E-06 58.5 8.0 33 77-110 151-183 (452)
243 3dk9_A Grase, GR, glutathione 95.0 0.082 2.8E-06 56.5 10.4 56 281-338 239-296 (478)
244 3hyw_A Sulfide-quinone reducta 94.9 0.012 4E-07 62.3 3.1 61 275-345 205-265 (430)
245 3lad_A Dihydrolipoamide dehydr 94.7 0.18 6.3E-06 53.7 12.2 52 281-338 232-283 (476)
246 3o0h_A Glutathione reductase; 94.7 0.064 2.2E-06 57.5 8.5 56 281-345 243-300 (484)
247 3oc4_A Oxidoreductase, pyridin 94.7 0.089 3.1E-06 55.8 9.5 33 77-110 149-181 (452)
248 3ntd_A FAD-dependent pyridine 94.7 0.11 3.9E-06 56.6 10.6 33 77-110 153-185 (565)
249 3ics_A Coenzyme A-disulfide re 94.2 0.14 4.8E-06 56.3 10.0 33 77-110 189-221 (588)
250 4dna_A Probable glutathione re 94.2 0.076 2.6E-06 56.5 7.6 51 281-339 222-272 (463)
251 1xdi_A RV3303C-LPDA; reductase 94.1 0.085 2.9E-06 56.7 7.7 51 280-339 233-283 (499)
252 1fec_A Trypanothione reductase 93.6 0.12 4.2E-06 55.4 7.8 51 280-338 241-291 (490)
253 2wpf_A Trypanothione reductase 93.5 0.12 4.3E-06 55.4 7.7 52 279-338 244-295 (495)
254 4g6h_A Rotenone-insensitive NA 92.7 0.15 5.2E-06 54.8 6.9 52 280-338 282-335 (502)
255 1gte_A Dihydropyrimidine dehyd 92.7 0.69 2.4E-05 54.3 12.9 32 77-109 334-366 (1025)
256 1nhp_A NADH peroxidase; oxidor 92.3 0.083 2.8E-06 55.9 4.0 35 75-110 149-183 (447)
257 3fwz_A Inner membrane protein 91.9 0.098 3.3E-06 45.6 3.4 33 76-109 8-40 (140)
258 3llv_A Exopolyphosphatase-rela 91.8 0.099 3.4E-06 45.5 3.4 31 77-108 8-38 (141)
259 3k30_A Histamine dehydrogenase 91.6 0.43 1.5E-05 53.5 9.1 33 77-110 525-559 (690)
260 2g1u_A Hypothetical protein TM 91.4 0.12 4.2E-06 45.8 3.6 33 76-109 20-52 (155)
261 1lss_A TRK system potassium up 91.3 0.13 4.4E-06 44.3 3.6 32 76-108 5-36 (140)
262 4gcm_A TRXR, thioredoxin reduc 91.1 0.15 5.1E-06 50.8 4.3 33 77-110 147-179 (312)
263 1id1_A Putative potassium chan 90.6 0.15 5.3E-06 45.0 3.4 31 77-108 5-35 (153)
264 3klj_A NAD(FAD)-dependent dehy 90.5 0.13 4.4E-06 53.4 3.2 34 77-111 148-181 (385)
265 1lvl_A Dihydrolipoamide dehydr 89.8 0.16 5.5E-06 53.9 3.3 34 76-110 172-205 (458)
266 2yqu_A 2-oxoglutarate dehydrog 89.8 0.19 6.6E-06 53.2 3.9 34 76-110 168-201 (455)
267 3p1w_A Rabgdi protein; GDI RAB 89.6 0.22 7.5E-06 53.0 4.1 52 276-334 262-313 (475)
268 1xhc_A NADH oxidase /nitrite r 89.5 0.2 6.7E-06 51.5 3.6 34 76-110 144-177 (367)
269 4a5l_A Thioredoxin reductase; 89.4 0.26 8.8E-06 48.9 4.3 34 76-110 153-186 (314)
270 3ic5_A Putative saccharopine d 89.2 0.24 8E-06 41.1 3.3 32 76-108 6-38 (118)
271 2hmt_A YUAA protein; RCK, KTN, 88.2 0.25 8.4E-06 42.6 2.8 31 77-108 8-38 (144)
272 1ges_A Glutathione reductase; 88.1 0.3 1E-05 51.7 3.9 33 77-110 169-201 (450)
273 3ado_A Lambda-crystallin; L-gu 87.4 0.31 1.1E-05 48.9 3.3 31 77-108 8-38 (319)
274 3d1c_A Flavin-containing putat 86.8 0.37 1.3E-05 49.0 3.6 33 77-110 168-200 (369)
275 3hn2_A 2-dehydropantoate 2-red 86.7 0.47 1.6E-05 47.4 4.2 32 77-109 4-35 (312)
276 2bc0_A NADH oxidase; flavoprot 86.7 0.41 1.4E-05 51.2 4.0 33 77-110 196-228 (490)
277 2r9z_A Glutathione amide reduc 86.5 0.42 1.4E-05 50.7 3.9 33 77-110 168-200 (463)
278 3l4b_C TRKA K+ channel protien 86.2 0.34 1.2E-05 45.6 2.7 31 78-109 3-33 (218)
279 3i83_A 2-dehydropantoate 2-red 86.1 0.47 1.6E-05 47.6 3.8 32 77-109 4-35 (320)
280 2gv8_A Monooxygenase; FMO, FAD 85.8 0.51 1.8E-05 49.7 4.2 33 77-110 214-247 (447)
281 1onf_A GR, grase, glutathione 85.2 0.57 2E-05 50.2 4.2 33 77-110 178-210 (500)
282 2xve_A Flavin-containing monoo 85.2 0.59 2E-05 49.6 4.3 33 77-110 199-231 (464)
283 3uox_A Otemo; baeyer-villiger 85.0 0.6 2E-05 50.7 4.3 34 77-111 187-220 (545)
284 3gwf_A Cyclohexanone monooxyge 84.9 0.65 2.2E-05 50.4 4.5 34 77-111 180-213 (540)
285 3kd9_A Coenzyme A disulfide re 84.7 0.59 2E-05 49.3 4.0 33 77-110 150-182 (449)
286 1ojt_A Surface protein; redox- 84.4 0.48 1.6E-05 50.5 3.2 34 76-110 186-219 (482)
287 2a87_A TRXR, TR, thioredoxin r 84.1 0.77 2.6E-05 46.1 4.4 54 282-339 203-256 (335)
288 1f0y_A HCDH, L-3-hydroxyacyl-C 84.1 0.61 2.1E-05 46.3 3.6 32 77-109 17-48 (302)
289 1ks9_A KPA reductase;, 2-dehyd 83.9 0.73 2.5E-05 45.1 4.0 32 78-110 3-34 (291)
290 4e12_A Diketoreductase; oxidor 83.8 0.64 2.2E-05 45.7 3.6 32 77-109 6-37 (283)
291 4eqs_A Coenzyme A disulfide re 83.8 0.55 1.9E-05 49.4 3.2 33 77-110 149-181 (437)
292 2raf_A Putative dinucleotide-b 83.8 0.78 2.7E-05 42.8 4.0 34 76-110 20-53 (209)
293 4g65_A TRK system potassium up 83.4 0.59 2E-05 49.5 3.3 33 77-110 5-37 (461)
294 1zk7_A HGII, reductase, mercur 83.2 0.77 2.6E-05 48.7 4.1 33 77-110 178-210 (467)
295 3ghy_A Ketopantoate reductase 83.1 0.66 2.3E-05 46.9 3.4 31 77-108 5-35 (335)
296 2bcg_G Secretory pathway GDP d 82.9 0.68 2.3E-05 48.9 3.5 50 278-334 250-299 (453)
297 3itj_A Thioredoxin reductase 1 82.3 0.98 3.4E-05 45.0 4.3 35 76-111 174-208 (338)
298 1jw9_B Molybdopterin biosynthe 82.2 0.66 2.3E-05 44.7 2.9 35 75-110 31-66 (249)
299 4ap3_A Steroid monooxygenase; 82.1 0.68 2.3E-05 50.3 3.2 34 77-111 193-226 (549)
300 3g17_A Similar to 2-dehydropan 82.0 0.55 1.9E-05 46.5 2.2 32 77-109 4-35 (294)
301 3fg2_P Putative rubredoxin red 81.9 0.9 3.1E-05 47.1 4.0 34 77-111 144-177 (404)
302 3iwa_A FAD-dependent pyridine 81.9 1.5 5.1E-05 46.5 5.8 36 76-111 4-40 (472)
303 3lxd_A FAD-dependent pyridine 81.7 0.94 3.2E-05 47.1 4.0 35 76-111 153-187 (415)
304 3ego_A Probable 2-dehydropanto 81.4 1 3.5E-05 44.9 4.0 31 77-109 4-34 (307)
305 3l8k_A Dihydrolipoyl dehydroge 81.4 0.96 3.3E-05 47.9 4.0 34 76-110 173-206 (466)
306 2ew2_A 2-dehydropantoate 2-red 81.2 0.92 3.1E-05 45.0 3.6 31 77-108 5-35 (316)
307 3hwr_A 2-dehydropantoate 2-red 81.0 0.9 3.1E-05 45.5 3.5 30 77-108 21-50 (318)
308 1lld_A L-lactate dehydrogenase 80.8 0.96 3.3E-05 45.2 3.6 33 76-109 8-42 (319)
309 3dfz_A SIRC, precorrin-2 dehyd 80.7 1 3.5E-05 42.5 3.5 31 76-107 32-62 (223)
310 3fbs_A Oxidoreductase; structu 80.4 1.5 5E-05 42.7 4.7 33 76-110 142-174 (297)
311 2x8g_A Thioredoxin glutathione 80.0 0.97 3.3E-05 49.6 3.5 31 77-108 288-318 (598)
312 3oj0_A Glutr, glutamyl-tRNA re 79.7 0.83 2.8E-05 39.7 2.4 32 77-109 23-54 (144)
313 1kyq_A Met8P, siroheme biosynt 79.7 0.81 2.8E-05 44.7 2.5 32 76-108 14-45 (274)
314 2y0c_A BCEC, UDP-glucose dehyd 79.4 1.1 3.7E-05 47.7 3.6 34 75-109 8-41 (478)
315 2dpo_A L-gulonate 3-dehydrogen 79.4 1.1 3.7E-05 44.9 3.4 32 77-109 8-39 (319)
316 3c85_A Putative glutathione-re 79.2 0.8 2.7E-05 41.6 2.2 33 77-109 41-73 (183)
317 3l9w_A Glutathione-regulated p 78.9 1.1 3.8E-05 46.7 3.4 33 77-110 6-38 (413)
318 1zcj_A Peroxisomal bifunctiona 78.7 1.3 4.4E-05 46.9 3.9 32 77-109 39-70 (463)
319 1d5t_A Guanine nucleotide diss 78.4 0.64 2.2E-05 48.8 1.4 48 278-334 242-289 (433)
320 1mv8_A GMD, GDP-mannose 6-dehy 78.0 1.5 5.2E-05 46.0 4.2 31 78-109 3-33 (436)
321 3k6j_A Protein F01G10.3, confi 77.7 1.3 4.6E-05 46.6 3.6 33 77-110 56-88 (460)
322 3rui_A Ubiquitin-like modifier 77.7 1.4 4.9E-05 44.3 3.7 35 75-110 34-69 (340)
323 1bg6_A N-(1-D-carboxylethyl)-L 77.7 1.4 4.6E-05 44.7 3.6 31 77-108 6-36 (359)
324 1zej_A HBD-9, 3-hydroxyacyl-CO 77.6 1.6 5.3E-05 43.2 3.8 32 76-109 13-44 (293)
325 1z82_A Glycerol-3-phosphate de 77.6 1.4 4.7E-05 44.4 3.6 33 75-108 14-46 (335)
326 1jay_A Coenzyme F420H2:NADP+ o 77.6 1.6 5.5E-05 40.5 3.8 30 78-108 3-33 (212)
327 3k96_A Glycerol-3-phosphate de 77.4 1.5 5E-05 44.7 3.7 33 76-109 30-62 (356)
328 1nyt_A Shikimate 5-dehydrogena 77.4 1.5 5E-05 42.8 3.6 31 77-108 121-151 (271)
329 3g79_A NDP-N-acetyl-D-galactos 77.1 2 6.7E-05 45.6 4.7 34 77-110 20-54 (478)
330 1txg_A Glycerol-3-phosphate de 76.7 1.2 4.2E-05 44.6 2.9 29 78-107 3-31 (335)
331 3f8d_A Thioredoxin reductase ( 76.4 1.4 4.9E-05 43.3 3.3 35 76-111 155-189 (323)
332 2aef_A Calcium-gated potassium 76.2 1.2 4.1E-05 42.2 2.5 31 77-109 11-41 (234)
333 3gg2_A Sugar dehydrogenase, UD 76.1 1.6 5.3E-05 46.1 3.6 32 77-109 4-35 (450)
334 1zud_1 Adenylyltransferase THI 76.0 2.1 7.3E-05 41.2 4.3 35 75-110 28-63 (251)
335 2ewd_A Lactate dehydrogenase,; 75.9 1.5 5E-05 43.9 3.2 32 77-109 6-38 (317)
336 2v6b_A L-LDH, L-lactate dehydr 75.9 1.7 5.7E-05 43.2 3.6 31 78-109 3-35 (304)
337 3r9u_A Thioredoxin reductase; 75.9 2 6.8E-05 42.2 4.2 34 77-111 149-182 (315)
338 3qfa_A Thioredoxin reductase 1 75.6 1.6 5.4E-05 47.0 3.5 31 77-108 212-242 (519)
339 1m6i_A Programmed cell death p 75.5 2.5 8.4E-05 45.1 5.0 39 73-111 9-48 (493)
340 3qha_A Putative oxidoreductase 75.4 2.5 8.5E-05 41.7 4.7 34 76-110 16-49 (296)
341 3nks_A Protoporphyrinogen oxid 75.3 0.87 3E-05 48.1 1.4 54 277-339 241-294 (477)
342 1evy_A Glycerol-3-phosphate de 75.1 1.5 5.2E-05 44.7 3.1 31 77-108 17-47 (366)
343 2hjr_A Malate dehydrogenase; m 75.0 2 6.9E-05 43.1 4.0 32 77-109 16-48 (328)
344 4a9w_A Monooxygenase; baeyer-v 75.0 2.2 7.5E-05 42.6 4.3 32 76-109 164-195 (357)
345 1pzg_A LDH, lactate dehydrogen 74.8 1.6 5.6E-05 43.9 3.2 33 76-109 10-43 (331)
346 3c7a_A Octopine dehydrogenase; 74.7 1.8 6.1E-05 44.8 3.6 29 77-106 4-33 (404)
347 1vg0_A RAB proteins geranylger 74.4 2.4 8.2E-05 46.7 4.6 51 276-332 384-434 (650)
348 2vns_A Metalloreductase steap3 74.4 1.9 6.5E-05 40.3 3.4 32 76-108 29-60 (215)
349 3dtt_A NADP oxidoreductase; st 74.4 2 6.8E-05 41.1 3.6 33 76-109 20-52 (245)
350 3lk7_A UDP-N-acetylmuramoylala 74.3 2.4 8.2E-05 44.7 4.5 32 77-109 11-42 (451)
351 2a9f_A Putative malic enzyme ( 74.1 1.6 5.4E-05 44.8 2.8 34 75-109 188-222 (398)
352 1cjc_A Protein (adrenodoxin re 74.0 2.2 7.7E-05 45.0 4.2 54 282-337 269-335 (460)
353 3h8v_A Ubiquitin-like modifier 73.9 1.6 5.4E-05 43.1 2.8 35 75-110 36-71 (292)
354 3phh_A Shikimate dehydrogenase 73.4 2.5 8.6E-05 41.1 4.0 34 76-110 119-152 (269)
355 1nvt_A Shikimate 5'-dehydrogen 73.0 2.3 7.9E-05 41.8 3.8 30 77-108 130-159 (287)
356 1vl6_A Malate oxidoreductase; 72.9 1.7 6E-05 44.3 2.8 34 75-109 192-226 (388)
357 2h78_A Hibadh, 3-hydroxyisobut 72.8 2.7 9.1E-05 41.5 4.2 32 77-109 5-36 (302)
358 3mog_A Probable 3-hydroxybutyr 72.5 2.1 7E-05 45.6 3.4 32 77-109 7-38 (483)
359 3ojo_A CAP5O; rossmann fold, c 72.5 2.3 7.8E-05 44.5 3.7 33 77-110 13-45 (431)
360 4b1b_A TRXR, thioredoxin reduc 72.3 2 6.8E-05 46.5 3.3 31 77-108 225-255 (542)
361 3ond_A Adenosylhomocysteinase; 72.3 2.3 7.7E-05 45.0 3.6 31 77-108 267-297 (488)
362 4dll_A 2-hydroxy-3-oxopropiona 72.2 2.8 9.6E-05 41.9 4.2 33 76-109 32-64 (320)
363 4dio_A NAD(P) transhydrogenase 72.2 2.6 8.9E-05 43.5 4.0 34 76-110 191-224 (405)
364 2egg_A AROE, shikimate 5-dehyd 72.1 2.6 9E-05 41.6 3.9 31 77-108 143-174 (297)
365 3g0o_A 3-hydroxyisobutyrate de 71.6 2.5 8.4E-05 41.9 3.6 33 76-109 8-40 (303)
366 3pef_A 6-phosphogluconate dehy 71.4 2.5 8.6E-05 41.4 3.6 33 77-110 3-35 (287)
367 2vdc_G Glutamate synthase [NAD 71.4 2.4 8.3E-05 44.7 3.7 34 76-110 265-299 (456)
368 2pv7_A T-protein [includes: ch 71.4 2.8 9.5E-05 41.4 3.9 32 77-109 23-55 (298)
369 1t2d_A LDH-P, L-lactate dehydr 71.3 2.5 8.6E-05 42.3 3.6 32 77-109 6-38 (322)
370 3doj_A AT3G25530, dehydrogenas 71.3 2.5 8.6E-05 42.0 3.6 33 76-109 22-54 (310)
371 1p77_A Shikimate 5-dehydrogena 71.3 1.8 6.3E-05 42.1 2.5 32 77-109 121-152 (272)
372 3vh1_A Ubiquitin-like modifier 71.2 2.7 9.4E-05 45.5 4.0 35 75-110 327-362 (598)
373 3o38_A Short chain dehydrogena 71.2 2.4 8.4E-05 40.8 3.4 30 78-108 25-56 (266)
374 4a7p_A UDP-glucose dehydrogena 71.0 2.7 9.4E-05 44.1 3.9 35 75-110 8-42 (446)
375 1a5z_A L-lactate dehydrogenase 70.8 2.1 7.2E-05 42.8 2.9 31 78-109 3-35 (319)
376 2eez_A Alanine dehydrogenase; 70.5 2.6 8.8E-05 43.1 3.6 32 76-108 167-198 (369)
377 1o94_A Tmadh, trimethylamine d 70.5 2.6 8.8E-05 47.4 3.8 32 77-109 530-563 (729)
378 4gsl_A Ubiquitin-like modifier 70.4 2.7 9.1E-05 45.7 3.7 35 75-110 326-361 (615)
379 2x5o_A UDP-N-acetylmuramoylala 70.4 2.2 7.6E-05 44.7 3.1 34 77-111 7-40 (439)
380 3gpi_A NAD-dependent epimerase 70.2 2.9 9.8E-05 40.6 3.7 33 77-110 5-37 (286)
381 3pdu_A 3-hydroxyisobutyrate de 70.1 2.6 8.8E-05 41.3 3.3 32 77-109 3-34 (287)
382 1vpd_A Tartronate semialdehyde 70.0 3.4 0.00012 40.6 4.2 31 77-108 7-37 (299)
383 3ew7_A LMO0794 protein; Q8Y8U8 69.8 3.1 0.00011 38.3 3.7 31 78-109 3-34 (221)
384 3dfu_A Uncharacterized protein 69.7 2 7E-05 40.7 2.3 30 77-107 8-37 (232)
385 2f1k_A Prephenate dehydrogenas 69.6 2.9 0.0001 40.6 3.6 30 78-108 3-32 (279)
386 1pjc_A Protein (L-alanine dehy 69.5 2.8 9.6E-05 42.7 3.6 32 76-108 168-199 (361)
387 1lu9_A Methylene tetrahydromet 69.5 2.8 9.7E-05 41.0 3.5 31 77-108 121-152 (287)
388 1yj8_A Glycerol-3-phosphate de 69.4 2 6.9E-05 44.0 2.5 33 77-110 23-62 (375)
389 1guz_A Malate dehydrogenase; o 69.3 3.4 0.00011 41.1 4.0 33 78-110 3-36 (310)
390 2gf2_A Hibadh, 3-hydroxyisobut 69.3 3.7 0.00013 40.2 4.3 31 78-109 3-33 (296)
391 3tl2_A Malate dehydrogenase; c 69.2 3 0.0001 41.6 3.6 31 77-108 10-41 (315)
392 4ezb_A Uncharacterized conserv 69.2 3.2 0.00011 41.4 3.8 32 77-109 26-58 (317)
393 1hyh_A L-hicdh, L-2-hydroxyiso 68.9 2.5 8.4E-05 42.1 2.9 31 78-109 4-36 (309)
394 3tnl_A Shikimate dehydrogenase 68.9 3 0.0001 41.5 3.5 31 77-108 156-187 (315)
395 3fbt_A Chorismate mutase and s 68.9 3.7 0.00013 40.2 4.1 33 76-109 123-156 (282)
396 3h2s_A Putative NADH-flavin re 68.8 3.2 0.00011 38.5 3.5 30 78-108 3-33 (224)
397 3h5n_A MCCB protein; ubiquitin 68.7 2.5 8.6E-05 42.9 3.0 35 75-110 118-153 (353)
398 3jyo_A Quinate/shikimate dehyd 68.7 3.2 0.00011 40.8 3.6 32 76-108 128-160 (283)
399 3ius_A Uncharacterized conserv 68.6 3.1 0.00011 40.3 3.6 32 77-109 7-38 (286)
400 4huj_A Uncharacterized protein 68.6 1.7 6E-05 40.7 1.7 33 76-109 24-57 (220)
401 2wtb_A MFP2, fatty acid multif 68.3 3 0.0001 46.8 3.7 32 77-109 314-345 (725)
402 2uyy_A N-PAC protein; long-cha 68.1 3.1 0.0001 41.3 3.4 33 76-109 31-63 (316)
403 1x13_A NAD(P) transhydrogenase 68.0 3.2 0.00011 43.0 3.6 33 76-109 173-205 (401)
404 3p2y_A Alanine dehydrogenase/p 67.9 2.6 8.9E-05 43.1 2.8 33 76-109 185-217 (381)
405 1x0v_A GPD-C, GPDH-C, glycerol 67.8 2 6.9E-05 43.4 2.0 33 77-110 10-49 (354)
406 1yqg_A Pyrroline-5-carboxylate 67.7 2.7 9.4E-05 40.4 2.9 30 78-108 3-33 (263)
407 3don_A Shikimate dehydrogenase 67.4 3.1 0.00011 40.7 3.2 32 77-109 119-151 (277)
408 3cky_A 2-hydroxymethyl glutara 67.2 4.2 0.00014 39.9 4.2 31 77-108 6-36 (301)
409 3vtf_A UDP-glucose 6-dehydroge 67.2 2.6 8.9E-05 44.1 2.8 34 74-108 20-53 (444)
410 1hdo_A Biliverdin IX beta redu 67.2 3.5 0.00012 37.5 3.4 31 78-109 6-37 (206)
411 4gx0_A TRKA domain protein; me 67.0 3.5 0.00012 44.8 3.8 34 76-110 349-382 (565)
412 3e8x_A Putative NAD-dependent 66.8 3.6 0.00012 38.6 3.5 33 77-110 23-56 (236)
413 3o6u_A Uncharacterized protein 66.8 2.1 7E-05 36.6 1.5 34 11-52 76-109 (128)
414 2g5c_A Prephenate dehydrogenas 66.6 3.6 0.00012 40.0 3.5 30 78-108 4-35 (281)
415 3zwc_A Peroxisomal bifunctiona 66.5 3.6 0.00012 46.1 3.9 32 77-109 318-349 (742)
416 1ur5_A Malate dehydrogenase; o 66.4 3.7 0.00013 40.8 3.6 32 77-109 4-36 (309)
417 2ywl_A Thioredoxin reductase r 66.2 6.5 0.00022 35.0 5.0 58 275-345 61-118 (180)
418 3o8q_A Shikimate 5-dehydrogena 66.2 4.2 0.00014 39.8 3.9 33 76-109 127-160 (281)
419 2vhw_A Alanine dehydrogenase; 66.1 3.6 0.00012 42.2 3.6 32 76-108 169-200 (377)
420 3c24_A Putative oxidoreductase 66.1 3.7 0.00012 40.1 3.5 31 77-108 13-44 (286)
421 2hk9_A Shikimate dehydrogenase 66.1 3.1 0.0001 40.6 2.9 32 77-109 131-162 (275)
422 3u62_A Shikimate dehydrogenase 66.0 3.7 0.00013 39.5 3.4 32 77-109 110-142 (253)
423 1l7d_A Nicotinamide nucleotide 65.9 4.1 0.00014 41.9 3.9 34 76-110 173-206 (384)
424 3pwz_A Shikimate dehydrogenase 65.9 4 0.00014 39.8 3.6 32 76-108 121-153 (272)
425 1tt5_B Ubiquitin-activating en 65.5 3.9 0.00013 42.7 3.7 34 75-109 40-74 (434)
426 3ggo_A Prephenate dehydrogenas 65.5 3.8 0.00013 40.8 3.5 32 77-109 35-68 (314)
427 2gag_A Heterotetrameric sarcos 65.5 3 0.0001 48.5 3.2 34 77-111 286-319 (965)
428 1leh_A Leucine dehydrogenase; 65.3 3.9 0.00013 41.6 3.6 31 77-108 175-205 (364)
429 2zyd_A 6-phosphogluconate dehy 65.1 4.1 0.00014 43.3 3.8 34 75-109 15-48 (480)
430 1i36_A Conserved hypothetical 64.9 3.7 0.00013 39.5 3.2 29 78-107 3-31 (264)
431 3dqp_A Oxidoreductase YLBE; al 64.9 4.5 0.00016 37.4 3.7 31 78-109 3-34 (219)
432 3d4o_A Dipicolinate synthase s 64.7 4.1 0.00014 40.0 3.6 32 77-109 157-188 (293)
433 2pd4_A Enoyl-[acyl-carrier-pro 64.7 5.9 0.0002 38.3 4.7 31 78-109 9-42 (275)
434 2dkn_A 3-alpha-hydroxysteroid 64.6 4.6 0.00016 38.1 3.9 31 78-109 4-35 (255)
435 1w4x_A Phenylacetone monooxyge 64.4 3.5 0.00012 44.5 3.2 34 77-111 188-221 (542)
436 3l6d_A Putative oxidoreductase 64.3 4 0.00014 40.4 3.4 33 76-109 10-42 (306)
437 2weu_A Tryptophan 5-halogenase 64.2 5.8 0.0002 42.2 4.9 52 275-334 178-229 (511)
438 3t4e_A Quinate/shikimate dehyd 64.2 4.3 0.00015 40.4 3.5 32 76-108 149-181 (312)
439 2axq_A Saccharopine dehydrogen 63.9 5.1 0.00018 42.3 4.3 32 77-108 25-56 (467)
440 2rir_A Dipicolinate synthase, 63.7 4.4 0.00015 40.0 3.6 33 76-109 158-190 (300)
441 3r6d_A NAD-dependent epimerase 63.6 4.6 0.00016 37.4 3.5 30 78-108 8-39 (221)
442 3qsg_A NAD-binding phosphogluc 63.6 3.6 0.00012 40.9 2.9 32 76-108 25-57 (312)
443 1npy_A Hypothetical shikimate 63.5 5.2 0.00018 38.9 4.0 31 77-108 121-152 (271)
444 1pgj_A 6PGDH, 6-PGDH, 6-phosph 63.5 4.1 0.00014 43.2 3.5 31 77-108 3-33 (478)
445 3eag_A UDP-N-acetylmuramate:L- 63.4 6.4 0.00022 39.3 4.7 33 77-110 6-39 (326)
446 1yb4_A Tartronic semialdehyde 63.3 4.8 0.00016 39.3 3.7 29 77-106 5-33 (295)
447 1dlj_A UDP-glucose dehydrogena 63.2 4.7 0.00016 41.7 3.8 30 78-109 3-32 (402)
448 1ff9_A Saccharopine reductase; 63.1 5.7 0.0002 41.7 4.5 31 77-108 5-35 (450)
449 2rcy_A Pyrroline carboxylate r 62.7 4 0.00014 39.2 3.0 33 77-110 6-42 (262)
450 1y8q_A Ubiquitin-like 1 activa 62.5 3.7 0.00013 41.6 2.8 34 75-109 36-70 (346)
451 1lqt_A FPRA; NADP+ derivative, 62.4 5.6 0.00019 41.9 4.3 51 283-337 265-328 (456)
452 2d5c_A AROE, shikimate 5-dehyd 62.4 4.7 0.00016 38.8 3.4 32 77-109 118-149 (263)
453 3gvi_A Malate dehydrogenase; N 62.2 5.5 0.00019 39.9 3.9 33 77-110 9-42 (324)
454 4e21_A 6-phosphogluconate dehy 62.0 4.9 0.00017 40.9 3.6 32 76-108 23-54 (358)
455 2pgd_A 6-phosphogluconate dehy 61.7 5 0.00017 42.6 3.8 32 77-109 4-35 (482)
456 1edz_A 5,10-methylenetetrahydr 61.7 7 0.00024 38.9 4.5 32 76-108 178-210 (320)
457 3k31_A Enoyl-(acyl-carrier-pro 61.6 6 0.0002 38.8 4.1 30 78-108 33-65 (296)
458 1wdk_A Fatty oxidation complex 61.6 3.6 0.00012 46.0 2.7 32 77-109 316-347 (715)
459 2cvz_A Dehydrogenase, 3-hydrox 61.6 6.8 0.00023 38.0 4.5 30 78-109 4-33 (289)
460 2e4g_A Tryptophan halogenase; 61.6 5.2 0.00018 43.2 4.0 52 275-334 199-251 (550)
461 1oju_A MDH, malate dehydrogena 61.1 4.3 0.00015 40.0 2.9 31 78-109 3-35 (294)
462 2qyt_A 2-dehydropantoate 2-red 61.1 3.2 0.00011 41.1 2.0 31 77-107 10-45 (317)
463 1pjq_A CYSG, siroheme synthase 61.1 4.9 0.00017 42.3 3.5 31 77-108 14-44 (457)
464 2dvm_A Malic enzyme, 439AA lon 61.0 4.3 0.00015 42.3 3.0 29 77-106 188-219 (439)
465 2h7i_A Enoyl-[acyl-carrier-pro 60.8 6 0.00021 38.1 3.9 31 78-109 10-43 (269)
466 3dhn_A NAD-dependent epimerase 60.7 5 0.00017 37.2 3.2 33 77-110 6-39 (227)
467 2o2s_A Enoyl-acyl carrier redu 60.7 6.8 0.00023 38.8 4.3 29 78-107 12-43 (315)
468 2i6t_A Ubiquitin-conjugating e 60.6 4.4 0.00015 40.2 2.9 33 76-109 15-49 (303)
469 3qvo_A NMRA family protein; st 60.6 5.5 0.00019 37.4 3.5 32 77-109 25-58 (236)
470 3n74_A 3-ketoacyl-(acyl-carrie 60.6 6.4 0.00022 37.5 4.0 30 78-108 12-42 (261)
471 1qsg_A Enoyl-[acyl-carrier-pro 60.4 6.2 0.00021 37.8 3.9 31 78-109 12-45 (265)
472 2yjz_A Metalloreductase steap4 64.6 1.8 6.3E-05 40.1 0.0 32 77-109 21-52 (201)
473 3oig_A Enoyl-[acyl-carrier-pro 60.2 6.5 0.00022 37.7 4.0 30 78-108 10-42 (266)
474 3ktd_A Prephenate dehydrogenas 60.1 5.3 0.00018 40.3 3.4 31 77-108 10-40 (341)
475 2p4q_A 6-phosphogluconate dehy 59.9 5.9 0.0002 42.2 3.9 34 75-109 10-43 (497)
476 3pqe_A L-LDH, L-lactate dehydr 59.9 4.6 0.00016 40.4 2.9 31 77-108 7-39 (326)
477 3vps_A TUNA, NAD-dependent epi 59.8 5.8 0.0002 38.9 3.7 33 77-110 9-42 (321)
478 3d1l_A Putative NADP oxidoredu 59.6 4.5 0.00015 38.9 2.7 31 77-108 12-43 (266)
479 4fs3_A Enoyl-[acyl-carrier-pro 59.6 7 0.00024 37.4 4.1 31 78-109 9-42 (256)
480 1y6j_A L-lactate dehydrogenase 59.5 5.6 0.00019 39.6 3.5 33 76-109 8-42 (318)
481 2izz_A Pyrroline-5-carboxylate 59.3 5.5 0.00019 39.7 3.4 32 77-109 24-59 (322)
482 1cyd_A Carbonyl reductase; sho 59.3 5.9 0.0002 37.2 3.5 30 78-108 10-40 (244)
483 3pid_A UDP-glucose 6-dehydroge 59.3 6.2 0.00021 41.2 3.8 32 76-109 37-68 (432)
484 3k7m_X 6-hydroxy-L-nicotine ox 59.2 6 0.0002 40.9 3.8 49 275-333 209-257 (431)
485 3p7m_A Malate dehydrogenase; p 59.2 6.6 0.00023 39.2 3.9 33 77-110 7-40 (321)
486 4aj2_A L-lactate dehydrogenase 59.2 6 0.0002 39.7 3.6 32 76-108 20-53 (331)
487 3hyw_A Sulfide-quinone reducta 59.1 8.1 0.00028 40.1 4.8 34 77-110 4-38 (430)
488 2o3j_A UDP-glucose 6-dehydroge 58.8 5.9 0.0002 42.0 3.7 32 77-108 11-43 (481)
489 2o7s_A DHQ-SDH PR, bifunctiona 58.6 3.8 0.00013 44.0 2.1 31 77-108 366-396 (523)
490 1y56_A Hypothetical protein PH 58.5 4.5 0.00015 43.1 2.7 36 74-111 107-142 (493)
491 2ahr_A Putative pyrroline carb 58.2 7 0.00024 37.3 3.8 31 77-108 5-35 (259)
492 2wyu_A Enoyl-[acyl carrier pro 58.2 5.9 0.0002 37.9 3.3 30 78-108 11-43 (261)
493 2p91_A Enoyl-[acyl-carrier-pro 58.1 6.5 0.00022 38.2 3.6 30 78-108 24-56 (285)
494 3orf_A Dihydropteridine reduct 57.9 7.5 0.00026 37.0 4.0 32 78-110 25-57 (251)
495 3gt0_A Pyrroline-5-carboxylate 57.8 6.2 0.00021 37.5 3.4 30 78-108 5-38 (247)
496 3ldh_A Lactate dehydrogenase; 57.6 5.3 0.00018 40.0 2.9 32 76-108 22-55 (330)
497 1np3_A Ketol-acid reductoisome 57.6 6.9 0.00024 39.3 3.8 32 77-109 18-49 (338)
498 2ph5_A Homospermidine synthase 57.6 4.7 0.00016 42.4 2.5 35 76-110 14-51 (480)
499 3guy_A Short-chain dehydrogena 57.4 7.5 0.00026 36.3 3.8 30 78-108 4-34 (230)
500 1lnq_A MTHK channels, potassiu 57.2 4.9 0.00017 40.3 2.6 32 77-110 117-148 (336)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=4.7e-99 Score=832.69 Aligned_cols=519 Identities=27% Similarity=0.449 Sum_probs=442.0
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC--CCcccccccccccc-CCcccccceecccccccccC-CCeee
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE--PTVTSVPGFAASAV-GTHLDWKYKTERNKYACLST-GGICE 150 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~--~~~~~~p~~~~~~~-~~~~~w~~~~~~~~~~~~~~-~~~~~ 150 (614)
+|||||||||+|||++|.||||+++++|||||||+.. .....+|..+..+. ++.++|.|.++||. ++ ++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEe
Confidence 5999999999999999999999779999999999876 34567787766655 47899999999997 67 88999
Q ss_pred ecCceeeccccccCCceeecCChhhHHHHHHc-CCCCCChhhHHHHHHhhhcCCCCCC-------CCCCccCCCCCeeee
Q psy1040 151 WPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQ-GNPGWGFSDVLRYFIKSEHNLNRDQ-------VDPEYHGYDGPLKVQ 222 (614)
Q Consensus 151 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~y~~~~e~~~~~~~-------~~~~~~~~~g~l~v~ 222 (614)
|++||+|||+|.+|+|+|.|+++.|||.|++. |+++|+|++++|||+|+|++..... .++.+|+.+||+.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 9999999999999999999875421 122379999999999
Q ss_pred eCCCCCchhHHHHHHHHHc--CCCcC-CCCCCCcceeEEeeccccCCcccccccccchhhhcCCCeEEEcccEEEEEEEc
Q psy1040 223 RFSSYPPIGEDIIKAGKEL--GYASG-DFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNID 299 (614)
Q Consensus 223 ~~~~~~~~~~~~~~a~~~~--G~~~~-d~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~n~~I~~~~~V~~I~~d 299 (614)
...+..+....|+++++++ |++.. |+|+....|++.++.++.+|.|+++..+||.++.+|+|++|++++.|+||+++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 9888889999999999999 99875 88888889999999988999999999999999999999999999999999997
Q ss_pred ---CCCCeEEEEEEEeCCCC-ceEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCcccccc-ccccccccccC
Q psy1040 300 ---PKTKRALSVQFKDTNTN-EIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLR-VGYNLVHHVGA 374 (614)
Q Consensus 300 ---~~~~ra~GV~~~~~~~g-~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlp-VG~nl~dH~~~ 374 (614)
+.++||+||++.+.. | +.++|+|+||||||||+|+||+|||+|||||+++|+++||++++||| ||+|||||+.+
T Consensus 238 ~~~~g~~rA~GVe~~~~~-g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~ 316 (566)
T 3fim_B 238 GTTNGLPAFRCVEYAEQE-GAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL 316 (566)
T ss_dssp EEETTEEECCEEEEESST-TSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE
T ss_pred cCCCCCCEEEEEEEEECC-CceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc
Confidence 222699999998753 5 78899999999999999999999999999999999999999999999 99999999986
Q ss_pred ceEEEEecCCCCCC---Ccc--h-HHHHhHHHhcCCCccccccccc-cccc-c----------------cCCCcceeecc
Q psy1040 375 NLKFSILDNGVSDN---NGE--I-DEKGTYLEESNEGLSSMKGNMD-EMLN-D----------------GRPGRSILSNT 430 (614)
Q Consensus 375 ~~~~~~~~~~~~~~---~~~--~-~~~~~~~~~~~~G~~~~~~~~~-~f~~-~----------------~~p~~~~~~~~ 430 (614)
.+.|..+.+.... ... . ....+|+ ..++||++..+... +|++ + ..||+|+++..
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~ 394 (566)
T 3fim_B 317 -PAAFFVNSNQTFDNIFRDSSEFNVDLDQWT-NTRTGPLTALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSN 394 (566)
T ss_dssp -CCEEEESCSCSSGGGGTCHHHHHHHHHHHH-HHSCSGGGCCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEES
T ss_pred -eEEEEeCCCcccchhhcChHHHHHHHHHHH-hcCCCCcccChhhheeeeccccchhhhhhhccccccCCCCCEEEEecc
Confidence 5667766543221 111 1 3457788 88999998764222 5654 1 15677765532
Q ss_pred ccccccccccccccCCCC-CCceEEeecccccCcceEEEeccCCCCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHHhchh
Q psy1040 431 FNALFSNNNKEEDKMPCG-RRSIYARPTNLLPISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKA 509 (614)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~s~g~v~l~s~d~~~~P~i~~~y~~~~~D~~~l~~~~~~~~~i~~~~~ 509 (614)
.. +.. .+.... ...+++...+++|.|||+|+|+|+||++.|+|++||+.++.|++.++++++.+++++++++
T Consensus 395 ~~--~~~-----~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~ 467 (566)
T 3fim_B 395 QW--FHP-----AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQA 467 (566)
T ss_dssp SC--CCT-----TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGG
T ss_pred cc--hhh-----cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcc
Confidence 11 000 111111 4567778888999999999999999999999999999999999999999999999999998
Q ss_pred hhhcccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCCCCC
Q psy1040 510 LQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTN 589 (614)
Q Consensus 510 ~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~P~~ 589 (614)
|+++..... .|++ ....+|++|+|++|....+.+|++||||||++++.++|||++|||||++||||+||||||++
T Consensus 468 ~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~ 542 (566)
T 3fim_B 468 WADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFA 542 (566)
T ss_dssp GTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSC
T ss_pred cCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCC
Confidence 888764432 3432 24578999999999999999999999999987765699999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHhh
Q psy1040 590 INSNPIATIIMIAEKGADMVKES 612 (614)
Q Consensus 590 ~~~Np~~ti~aia~r~Ad~I~~~ 612 (614)
+++||++|+||||||+||+|+++
T Consensus 543 ~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 543 PNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp CSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999986
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.5e-96 Score=811.75 Aligned_cols=524 Identities=26% Similarity=0.387 Sum_probs=416.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC---CCccccccccccccCCcccccceecccccccccC-CCe
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE---PTVTSVPGFAASAVGTHLDWKYKTERNKYACLST-GGI 148 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~---~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~ 148 (614)
+.+|||||||||+|||++|.||+|+++++|||||||+.. .+....|..+..++++.++|.|.++|+. + ++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~ 91 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQT 91 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCe
Confidence 467999999999999999999999889999999999843 2334556666666688899999999875 3 778
Q ss_pred eeecCceeeccccccCCceeecCChhhHHHHHHcCCC-CCChhhHHHHHHhhhcCCCCC--------CCCCCccCCCCCe
Q psy1040 149 CEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNP-GWGFSDVLRYFIKSEHNLNRD--------QVDPEYHGYDGPL 219 (614)
Q Consensus 149 ~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~-~w~~~~l~~y~~~~e~~~~~~--------~~~~~~~~~~g~l 219 (614)
+.|+|||+|||+|.+|+|+|.|+++.|||.|++.|++ +|+|++++|||+|+|++..+. ..+..+|+.+||+
T Consensus 92 ~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl 171 (583)
T 3qvp_A 92 ALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTV 171 (583)
T ss_dssp CEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSE
T ss_pred eeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCE
Confidence 8999999999999999999999999999999999888 999999999999999986432 0122379999999
Q ss_pred eeeeC---CCCCchhHHHHHHHHHcCCCcC-CCCCCCcceeEEeecccc-CCcccccccccchhhhcCCCeEEEcccEEE
Q psy1040 220 KVQRF---SSYPPIGEDIIKAGKELGYASG-DFNGANQIGVNFAQVMVD-NGVRSSTPRMFLRDKYKQDNLKVQLNAHVM 294 (614)
Q Consensus 220 ~v~~~---~~~~~~~~~~~~a~~~~G~~~~-d~~~~~~~g~~~~~~~~~-~g~r~s~~~~~L~~~~~~~n~~I~~~~~V~ 294 (614)
.+... ....+..+.|+++++++|++.. |+|+..+.|++.++.++. +|.|+++..+||.++++|+|++|++++.|+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~ 251 (583)
T 3qvp_A 172 HAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVG 251 (583)
T ss_dssp EEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEE
T ss_pred EecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEE
Confidence 98876 2346788899999999999976 889888999988887764 789999999999999999999999999999
Q ss_pred EEEEcCC--CCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCccccccccccccccc
Q psy1040 295 KLNIDPK--TKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLRVGYNLVHHV 372 (614)
Q Consensus 295 ~I~~d~~--~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlpVG~nl~dH~ 372 (614)
||+++++ ++||+||++...+ |+.++|+|+||||||||+|+||+|||+|||||+++|+++||++++|||||+|||||+
T Consensus 252 rIl~d~~~~~~ra~GV~~~~~~-G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLqDH~ 330 (583)
T 3qvp_A 252 KVLLSQNGTTPRAVGVEFGTHK-GNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQT 330 (583)
T ss_dssp EEEEECSSSSCEEEEEEEESST-TCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBBCCE
T ss_pred EEEeccCCCCCEEEEEEEEecC-CcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchhhCc
Confidence 9999842 5799999998432 888999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCCCCCCC-----cch--------HHHHhHHHhcCCCccccccc-ccccccccCCCcceeecccccc--cc
Q psy1040 373 GANLKFSILDNGVSDNN-----GEI--------DEKGTYLEESNEGLSSMKGN-MDEMLNDGRPGRSILSNTFNAL--FS 436 (614)
Q Consensus 373 ~~~~~~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~G~~~~~~~-~~~f~~~~~p~~~~~~~~~~~~--~~ 436 (614)
.+ .+.+..+....... ... .....|+ ....+++..... ..+|.+ .++++..+... .+ +.
T Consensus 331 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 405 (583)
T 3qvp_A 331 TA-TVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELL-NTKLEQWAEEAVARGGFHN--TTALLIQYENY-RDWIVN 405 (583)
T ss_dssp EE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHH-HHCHHHHHHHHHHTTSCSC--HHHHHHHHHHH-HHHHHH
T ss_pred cc-eEEEEecCCccccccccccccHHHhhccchHHHHHHH-HhhcchhhcccccccCccc--cHHHHhhhccc-hhhhcc
Confidence 85 57777653311000 000 1112222 222222111000 001221 11111111000 00 00
Q ss_pred cc--ccccccCCCCCCceEEeecccccCcceEEEeccCCCCCCCEE-EeCCCCCHHHHHHHHHHHHHHHHHHhchhhhhc
Q psy1040 437 NN--NKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPFEYPKI-HSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKW 513 (614)
Q Consensus 437 ~~--~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~P~i-~~~y~~~~~D~~~l~~~~~~~~~i~~~~~~~~~ 513 (614)
.. ..+.++. . ...+.+....++|.|||+|+|+|+||++.|+| ++||+.++.|++.++++++.+++|+++++|+++
T Consensus 406 ~~~~~~~~~~~-~-~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 483 (583)
T 3qvp_A 406 HNVAYSELFLD-T-AGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTY 483 (583)
T ss_dssp SCCEEEEEEEE-C-TTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHH
T ss_pred CCCCcceeeec-c-CCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhc
Confidence 00 0000000 0 01223333447899999999999999999999 999999999999999999999999999988887
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCCCCCCCcc
Q psy1040 514 DFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSN 593 (614)
Q Consensus 514 g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~P~~~~~N 593 (614)
.... ..|+|......+|++|+|++|....+.+|++||||||++++ ++|||++|||||++||||+|+||||+++++|
T Consensus 484 ~~~~---~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n 559 (583)
T 3qvp_A 484 FAGE---TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGVQGLRVIDGSIPPTQMSSH 559 (583)
T ss_dssp EEEE---EESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSCCSSC
T ss_pred cccc---cCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecCCCeEEeecccCCCCCCcC
Confidence 6432 45777655668999999999999999999999999998654 6999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q psy1040 594 PIATIIMIAEKGADMVKESW 613 (614)
Q Consensus 594 p~~ti~aia~r~Ad~I~~~~ 613 (614)
|++|+||||||+||+|+++|
T Consensus 560 ~~~t~~aiaeraAd~I~~~~ 579 (583)
T 3qvp_A 560 VMTVFYAMALKISDAILEDY 579 (583)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999987
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=3.2e-94 Score=795.86 Aligned_cols=516 Identities=27% Similarity=0.398 Sum_probs=426.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC---CCccccccccccccCCcccccceecccccccccCCCee
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE---PTVTSVPGFAASAVGTHLDWKYKTERNKYACLSTGGIC 149 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~---~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 149 (614)
..+|||||||||.|||++|.||||+++++|||||||+.. .+...+|..+..++++.++|.|.++.. ++.+
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~~-------~r~~ 76 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTMV-------RRDD 76 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEEE-------EETT
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEEC-------Cccc
Confidence 457999999999999999999999945899999999873 345677888877888899999998732 3334
Q ss_pred e------ecCceeeccccccCCceeecCChhhHHHHHHcCCCCCChhhHHHHHHhhhcCCCCCCC---CCCccCCCCCee
Q psy1040 150 E------WPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQV---DPEYHGYDGPLK 220 (614)
Q Consensus 150 ~------~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~y~~~~e~~~~~~~~---~~~~~~~~g~l~ 220 (614)
. |+|||+|||+|.+|+|+|.|+++.|||.|++.|+++|+|++++|||+|+|.+...... +..+|+.+||+.
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 4 9999999999999999999999999999999999999999999999999988654211 112689999999
Q ss_pred eeeCCCCC---chhHHHHHHHHHcCCCcC-CCCCCCcceeEEeeccccCCcccccccccchhhhcCCCeEEEcccEEEEE
Q psy1040 221 VQRFSSYP---PIGEDIIKAGKELGYASG-DFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKL 296 (614)
Q Consensus 221 v~~~~~~~---~~~~~~~~a~~~~G~~~~-d~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~n~~I~~~~~V~~I 296 (614)
+....+.. +..+.++++++++|++.. |+|+....|++..+.++..|.|+++. .| +.+|+|++|++++.|+||
T Consensus 157 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~s~~-~~---l~~r~Nl~v~~~a~v~ri 232 (577)
T 3q9t_A 157 ISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGSF-LF---VKNKPNITIVPEVHSKRL 232 (577)
T ss_dssp EEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEECCGG-GG---SSSCTTEEEECSEEEEEE
T ss_pred eeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEeeHH-HH---HhcCCCeEEEcCcEEEEE
Confidence 98876543 366778899999999976 78888889999988888899998765 34 356899999999999999
Q ss_pred EEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCcccccc-ccccccccccCc
Q psy1040 297 NIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLR-VGYNLVHHVGAN 375 (614)
Q Consensus 297 ~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlp-VG~nl~dH~~~~ 375 (614)
++++++++|+||++.+.+ |+.++|+|+|+||||||+|+||+|||+|||||+++|+++||++++|+| ||+|||||+.+
T Consensus 233 ~~~~~~~~a~GV~~~~~~-g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~- 310 (577)
T 3q9t_A 233 IINEADRTCKGVTVVTAA-GNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGV- 310 (577)
T ss_dssp EEETTTTEEEEEEEEETT-SCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEE-
T ss_pred EEeCCCCEEEEEEEEeCC-CcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcce-
Confidence 998656899999998754 788899999999999999999999999999999999999999999999 99999999985
Q ss_pred eEEEEecCCCCCC----Ccc---hHHHHhHHHhcCCCccccccccc--cccc-------------------------cc-
Q psy1040 376 LKFSILDNGVSDN----NGE---IDEKGTYLEESNEGLSSMKGNMD--EMLN-------------------------DG- 420 (614)
Q Consensus 376 ~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~G~~~~~~~~~--~f~~-------------------------~~- 420 (614)
.+.+.++...... ... .....+|+ ..+.||++... .+ +|.+ +.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~~Gpl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (577)
T 3q9t_A 311 PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYN-KNRSGPVGSGL-LELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLG 388 (577)
T ss_dssp EEEEEECTTSSSHHHHTSCSHHHHHHHHHHH-HHSCSGGGCCS-EEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTS
T ss_pred eEEEEeCCCCccchhhhcchhHHHHHHHHHH-hcCCCCcccch-hheeEEeecChhhhcchhhhhhhhccccccccCCCC
Confidence 5777776543211 011 14467787 78999998532 22 4432 01
Q ss_pred CCCcceeeccccccccccccccccCCCC-CCceEEeecccccCcce-EEEeccCCCCCCCEEEeCCCCCHHHHHHHHHHH
Q psy1040 421 RPGRSILSNTFNALFSNNNKEEDKMPCG-RRSIYARPTNLLPISRG-RLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGI 498 (614)
Q Consensus 421 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~s~g-~v~l~s~d~~~~P~i~~~y~~~~~D~~~l~~~~ 498 (614)
.|++++++.+... ..+ ...+.... ...+++...+++|.||| +|+|+|+||++.|+|++||+.++.|++.+++++
T Consensus 389 ~p~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~ 464 (577)
T 3q9t_A 389 QPHFELDFVCMFG---TAF-QWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGI 464 (577)
T ss_dssp CCSEEEEEESSCC---GGG-CSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHH
T ss_pred CceEEEEeccccc---ccc-cccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHH
Confidence 4566655432110 000 00000111 34577888889999999 999999999999999999999999999999999
Q ss_pred HHHHHHH-hchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCC
Q psy1040 499 RIIQKLT-RTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPN 577 (614)
Q Consensus 499 ~~~~~i~-~~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~n 577 (614)
+.+++++ ++++|+++..... .|+ ....+|++|+|++|....+.+|++||||||++++ ++|||++|||||++|
T Consensus 465 ~~~~~i~~~~~~~~~~~~~e~---~p~---~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~ 537 (577)
T 3q9t_A 465 RFSYDLLFKGEGFKDLVESEY---PWE---MPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID-QGVVDPKLKVHGIKK 537 (577)
T ss_dssp HHHHHHHHHSTTGGGTEEEEE---SSC---CCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-TCSBCTTCBBTTCBS
T ss_pred HHHHHHHHhChhhhhcccccc---CCC---CCcCCHHHHHHHHHhccccccccccceecCCCCC-CceECCCCeEeCCCC
Confidence 9999999 8888888765432 233 2457899999999999999999999999998665 799999999999999
Q ss_pred cEEeccCCCCCCCCcchHHHHHHHHHHHHHHHHhhhC
Q psy1040 578 LRVMDASIFPTNINSNPIATIIMIAEKGADMVKESWR 614 (614)
Q Consensus 578 L~V~DaSv~P~~~~~Np~~ti~aia~r~Ad~I~~~~~ 614 (614)
||||||||||+++++||++|+||||||+||+|+++|+
T Consensus 538 LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 538 LRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp EEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred cEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999985
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=7.4e-88 Score=750.83 Aligned_cols=523 Identities=24% Similarity=0.364 Sum_probs=417.7
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC--Cccc-cccccccccCCcccccceecccccccccC-CCe
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP--TVTS-VPGFAASAVGTHLDWKYKTERNKYACLST-GGI 148 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~--~~~~-~p~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~ 148 (614)
..+||+||||+|++|+++|.+|++++|++|+|||+|+... .... +|..+..++.+.++|.|.++| ++ ++.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~ 95 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRT 95 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCce
Confidence 3579999999999999999999994499999999998763 2234 777665556677899999887 34 778
Q ss_pred eeecCceeeccccccCCceeecCChhhHHHHHHc-CCCCCChhhHHHHHHhhhcCCCCC------C--CCCCccCCCCCe
Q psy1040 149 CEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQ-GNPGWGFSDVLRYFIKSEHNLNRD------Q--VDPEYHGYDGPL 219 (614)
Q Consensus 149 ~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~y~~~~e~~~~~~------~--~~~~~~~~~g~l 219 (614)
+.|++||+|||+|.+|+|+|.|+++.||+.|++. |+++|+|++++|||+|+|++..+. . .++.+|+.+||+
T Consensus 96 ~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl 175 (587)
T 1gpe_A 96 NNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTV 175 (587)
T ss_dssp CEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSE
T ss_pred eeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCE
Confidence 8999999999999999999999999999999998 999999999999999999988652 0 122378889999
Q ss_pred eeeeC---CCCCchhHHHHHHHHHcCCCcC-CCCCCCcceeEEeeccc-cCCcccccccccchhhhcCCCeEEEcccEEE
Q psy1040 220 KVQRF---SSYPPIGEDIIKAGKELGYASG-DFNGANQIGVNFAQVMV-DNGVRSSTPRMFLRDKYKQDNLKVQLNAHVM 294 (614)
Q Consensus 220 ~v~~~---~~~~~~~~~~~~a~~~~G~~~~-d~~~~~~~g~~~~~~~~-~~g~r~s~~~~~L~~~~~~~n~~I~~~~~V~ 294 (614)
.+.++ ....+..+.|.++++++|++.. |+|+..+.|++.++.++ ..|.|+++..+||.++++++|++|++++.|+
T Consensus 176 ~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~ 255 (587)
T 1gpe_A 176 QSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVG 255 (587)
T ss_dssp EEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEE
T ss_pred EEccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEE
Confidence 98754 3457788999999999999976 78888888998887765 4789999999999888889999999999999
Q ss_pred EEEEcCCC--CeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCccccccccccccccc
Q psy1040 295 KLNIDPKT--KRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLRVGYNLVHHV 372 (614)
Q Consensus 295 ~I~~d~~~--~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlpVG~nl~dH~ 372 (614)
+|++++++ ++|+||++.+.+ |+.++|+|+|+||||||+|+||+|||+|||||+++|+++||++++|+|||+|||||+
T Consensus 256 ~l~~~~~~~~~~~~GV~~~~~~-g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH~ 334 (587)
T 1gpe_A 256 KVLFKQTASGPQAVGVNFGTNK-AVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQT 334 (587)
T ss_dssp EEEEEEETTEEEEEEEEEEEET-TEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCCE
T ss_pred EEEECCCCCCCEEEEEEEEeCC-CcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcCc
Confidence 99998422 599999998422 888899998899999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCCCCCCCcc--h-HHHHhHHHhcCCCccccccccc--cccc-cc-----------CCCcceeeccc-ccc
Q psy1040 373 GANLKFSILDNGVSDNNGE--I-DEKGTYLEESNEGLSSMKGNMD--EMLN-DG-----------RPGRSILSNTF-NAL 434 (614)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~G~~~~~~~~~--~f~~-~~-----------~p~~~~~~~~~-~~~ 434 (614)
.+ .+.+.+++........ . .....|. ..+.|+++... .+ .|.+ .. .|+++.++..+ ..+
T Consensus 335 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (587)
T 1gpe_A 335 TT-TVSSRASSAGAGQGQAVFFANFTETFG-DYAPQARDLLN-TKLDQWAEETVARGGFHNVTALKVQYENYRNWLLDED 411 (587)
T ss_dssp EE-EEEEEECGGGCSBCEEEEEEEHHHHHG-GGHHHHHHHHH-HSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHSC
T ss_pred cc-ceEEEeCCCcccccchHHHHHHHHHHH-hCCCCCccccc-cceeeEeecccccccccccccccccHHHHhhhccCCC
Confidence 86 5667666442211110 1 2334555 44445554221 11 2322 00 12222211100 000
Q ss_pred ccccccccccCCCCCCceEEeecccccCcceEEEeccCCCCCCC-EEEeCCCCCHHHHHHHHHHHHHHHHHHhchhhhhc
Q psy1040 435 FSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPFEYP-KIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKW 513 (614)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~P-~i~~~y~~~~~D~~~l~~~~~~~~~i~~~~~~~~~ 513 (614)
+. ..+.++.+ ...+++...+++|+|||+|+|+++||++.| +|+++|+.++.|++.++++++.+++++++..++.+
T Consensus 412 ~~--~~~~~~~~--~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 487 (587)
T 1gpe_A 412 VA--FAELFMDT--EGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEY 487 (587)
T ss_dssp CE--EEEEEEEC--TTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHH
T ss_pred Cc--ceeeeecC--CCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhh
Confidence 00 00000000 124566677789999999999999999999 99999999999999999999999999998888876
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCCCCCCCcc
Q psy1040 514 DFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSN 593 (614)
Q Consensus 514 g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~P~~~~~N 593 (614)
.... ..|++......+|++|++++|....+.+|++||||||+++ .+||||++|||||++||||+|+||||+++++|
T Consensus 488 ~~~~---~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~-~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~N 563 (587)
T 1gpe_A 488 FAGE---TLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRE-LGGVVDATAKVYGTQGLRVIDGSIPPTQVSSH 563 (587)
T ss_dssp EEEE---EESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGG-GTCSBCTTCBBTTCBSEEECSTTCCSSCCSSC
T ss_pred cccc---cCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCC-CCceECCCCEEECCCCcEEeeeccCCCCCCcc
Confidence 5432 2344332345789999999999999999999999999754 37999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q psy1040 594 PIATIIMIAEKGADMVKESW 613 (614)
Q Consensus 594 p~~ti~aia~r~Ad~I~~~~ 613 (614)
|++|+||||||+||+|+++|
T Consensus 564 p~~ti~aiAeraAd~I~~~~ 583 (587)
T 1gpe_A 564 VMTIFYGMALKVADAILDDY 583 (587)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999987
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=2.9e-85 Score=725.06 Aligned_cols=506 Identities=28% Similarity=0.472 Sum_probs=414.9
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCC--ccccccccccccCCcccccceecccccccccCCCeeee
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPT--VTSVPGFAASAVGTHLDWKYKTERNKYACLSTGGICEW 151 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~--~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 151 (614)
.+||+||||+|++|+++|.+|++++|++|+|||+|+.... ...+|..+....++..+|.|.++|+.. .++.+.|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~----~~~~~~~ 87 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN----GNSFMRH 87 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS----SCTTCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC----CCceEEe
Confidence 4799999999999999999999987899999999987642 345666554444677899999988763 2567889
Q ss_pred cCceeeccccccCCceeecCChhhHHHHHH-cCCCCCChhhHHHHHHhhhcCCCCCCCCCCccCCCCCeeeeeCCCCCch
Q psy1040 152 PRGKMLAGTGAMTGMMYTRSHPSIYDEWQR-QGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPI 230 (614)
Q Consensus 152 ~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~-~g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~~g~l~v~~~~~~~~~ 230 (614)
++|++|||+|.+|+|+|.|+.+.||+.|++ .|+++|+|++++|||+++|++.... .+..+|+..|++.+.......+.
T Consensus 88 ~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~-~~~~~~g~~Gpl~v~~~~~~~~~ 166 (546)
T 2jbv_A 88 ARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDPT 166 (546)
T ss_dssp CCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB-TTBTTSCBSCSEEEEECCSCCHH
T ss_pred ecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC-CccccCCCCCCEEEecCCCCCHH
Confidence 999999999999999999999999999998 7999999999999999999987621 10127888999999877777888
Q ss_pred hHHHHHHHHHcCCCcCCCCCCC--cceeEEeecccc-CCcccccccccchhhhcCCCeEEEcccEEEEEEEcCCCCeEEE
Q psy1040 231 GEDIIKAGKELGYASGDFNGAN--QIGVNFAQVMVD-NGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALS 307 (614)
Q Consensus 231 ~~~~~~a~~~~G~~~~d~~~~~--~~g~~~~~~~~~-~g~r~s~~~~~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~G 307 (614)
.+.|.++++++|++..+.|+.. +.|++.++.+|. +|.|+++..+||.++.+++|++|++++.|++|++++ +++++|
T Consensus 167 ~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~-~~~~~G 245 (546)
T 2jbv_A 167 GVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDA-DRRCTG 245 (546)
T ss_dssp HHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECT-TSBEEE
T ss_pred HHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECC-CCeEEE
Confidence 9999999999999977777777 889999998888 999999999999998888999999999999999983 289999
Q ss_pred EEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCcccccc-ccccccccccCceEEEEecCCCC
Q psy1040 308 VQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLR-VGYNLVHHVGANLKFSILDNGVS 386 (614)
Q Consensus 308 V~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~ 386 (614)
|++.+..+|+.++|+|+|+||||||+++||+||++|||||+++|+++||+++.|+| ||+|||||+.+ .+.+.++++..
T Consensus 246 V~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~-~~~~~~~~~~~ 324 (546)
T 2jbv_A 246 VDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEG-VVQFEAKQPMV 324 (546)
T ss_dssp EEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEC-CEEEEESSCCC
T ss_pred EEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccc-eEEEEecCCCc
Confidence 99986534777899998899999999999999999999999999999999999999 99999999986 46666664411
Q ss_pred CCCcchHHHHhHHHhcCCCccccccccccccc-c--c-CCCcceeeccccccccccccccccCCCCCCceEEeecccccC
Q psy1040 387 DNNGEIDEKGTYLEESNEGLSSMKGNMDEMLN-D--G-RPGRSILSNTFNALFSNNNKEEDKMPCGRRSIYARPTNLLPI 462 (614)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~f~~-~--~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 462 (614)
.. ..+... ..+|++ . . .|++++++.... +...+..... ......+++...+++|+
T Consensus 325 ~~--------------~~~~~~----~~~f~~~~~~~~~p~~~~~~~~~~--~~~~~~~~g~-~~~~~~~~~~~~~~~P~ 383 (546)
T 2jbv_A 325 AE--------------STQWWE----IGIFTPTEDGLDRPDLMMHYGSVP--FDMNTLRHGY-PTTENGFSLTPNVTHAR 383 (546)
T ss_dssp SC--------------CSSSCC----EEEEECSSTTCSSCSEEEEEESSC--CCTTTGGGTC-CCCSSEEEEEEEETTCC
T ss_pred cc--------------ccchhh----eEEEEecCCCCCCCceEEEecccc--ccccccccCc-cCCCCeEEEEEEEcccC
Confidence 00 000000 013333 1 1 677777653321 1000000000 00134566667778999
Q ss_pred cceEEEeccCCCCCCCEEEeCCCCCHH--HHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHH
Q psy1040 463 SRGRLVLRSADPFEYPKIHSNYLVMKQ--DIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYI 540 (614)
Q Consensus 463 s~g~v~l~s~d~~~~P~i~~~y~~~~~--D~~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i 540 (614)
|||+|+|+++||++.|+|+++|+.++. |++.++++++.+++++++..++++..... .|++ ...+|++|++++
T Consensus 384 srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~p~~---~~~sd~~~~~~i 457 (546)
T 2jbv_A 384 SRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGREL---SPGV---EAQTDEELQDYI 457 (546)
T ss_dssp CCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEE---ESCT---TCCSHHHHHHHH
T ss_pred cccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccc---cCCC---CCCCHHHHHHHH
Confidence 999999999999999999999999999 99999999999999999888877654322 3443 457899999999
Q ss_pred hccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCCCCCCCcchHHHHHHHHHHHHHHHHhhh
Q psy1040 541 KTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGADMVKESW 613 (614)
Q Consensus 541 ~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~P~~~~~Np~~ti~aia~r~Ad~I~~~~ 613 (614)
+....+.+|++||||||+.+|+++|||++|||||++||||+|+||||+++++||++|+||||||+||+|+++|
T Consensus 458 r~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 530 (546)
T 2jbv_A 458 RKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSAR 530 (546)
T ss_dssp HHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC----
T ss_pred HhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999976667899999999999999999999999999999999999999999999999887
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=2.8e-85 Score=726.00 Aligned_cols=502 Identities=28% Similarity=0.452 Sum_probs=404.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC-CccccccccccccCCcccccceecccccccccC-CCeee
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP-TVTSVPGFAASAVGTHLDWKYKTERNKYACLST-GGICE 150 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~-~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~ 150 (614)
..+|||||||||+|||++|.||||++|+||||||||+... .....|..+..++++.++|.|.++|+. ++ ++.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~----~~~~~~~~ 90 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQA----GTAGRAHH 90 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBG----GGTTBCCE
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccC----CCCCCeEe
Confidence 3479999999999999999999997689999999998753 344567777777888999999999987 56 78899
Q ss_pred ecCceeeccccccCCceeecCChhhHHHHHHc-CCCCCChhhHHHHHHhhhcCCCCCCCCCCccCCCCCeeeeeCC-CCC
Q psy1040 151 WPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQ-GNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFS-SYP 228 (614)
Q Consensus 151 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~~g~l~v~~~~-~~~ 228 (614)
|++|++|||+|.+|+|+|.|+.+.||+.|++. ++.+|+|++++|||++.|+...... . .++..|+..+.... ...
T Consensus 91 ~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~--~-~~~~~g~~~~~~~~~~~~ 167 (526)
T 3t37_A 91 WARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGD--G-IHGKGGPLPIHLPADEVS 167 (526)
T ss_dssp ECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTS--S-SSCSSCSEECBCCSTTSC
T ss_pred ccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCc--c-ccCcCCCcCcccccccCC
Confidence 99999999999999999999999999999865 7899999999999999999865421 1 67778888766543 336
Q ss_pred chhHHHHHHHHHcCCCcC-CCCCCCcceeEEeeccccCCcccccccccchhh-hcCCCeEEEcccEEEEEEEcCCCCeEE
Q psy1040 229 PIGEDIIKAGKELGYASG-DFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDK-YKQDNLKVQLNAHVMKLNIDPKTKRAL 306 (614)
Q Consensus 229 ~~~~~~~~a~~~~G~~~~-d~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~-~~~~n~~I~~~~~V~~I~~d~~~~ra~ 306 (614)
++.+.|.++++++|++.. +.+...+.+++.++..+..|.|.+...+++.++ ..++|++|++++.|++|+++ +++++
T Consensus 168 p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~--~~~a~ 245 (526)
T 3t37_A 168 PLARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE--GNQVR 245 (526)
T ss_dssp HHHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE--TTEEE
T ss_pred HHHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec--CCeEE
Confidence 788899999999999876 667777778888888888999999988888765 57899999999999999998 78999
Q ss_pred EEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCcccccc-ccccccccccCceEEEEecCCC
Q psy1040 307 SVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLR-VGYNLVHHVGANLKFSILDNGV 385 (614)
Q Consensus 307 GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~ 385 (614)
||++... ++..++.| |+||||||+|+||+|||+|||||+++|+++||+++.|+| ||+|||||+......+..+.+.
T Consensus 246 gv~~~~~--~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~ 322 (526)
T 3t37_A 246 SLEVVGR--QGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV 322 (526)
T ss_dssp EEEEEET--TEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC
T ss_pred EEEEEec--CceEEEee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc
Confidence 9999987 77788999 599999999999999999999999999999999999999 9999999987543344444332
Q ss_pred CCCCcchHHHHhHHHhcCCCcccccccccccccccCCCcceeeccccccccccccccccCCCCCCceEEeecccccCcce
Q psy1040 386 SDNNGEIDEKGTYLEESNEGLSSMKGNMDEMLNDGRPGRSILSNTFNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRG 465 (614)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g 465 (614)
............|. ....+... ..|++++.+.... + ..+.+..+.....+.+...+++|.|+|
T Consensus 323 ~~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~l~~p~srG 385 (526)
T 3t37_A 323 PPSRLQHSESMAYM---RADSFTAA---------GQPEIVVGCGVAP--I---VSESFPAPAAGSAYSLLFGITHPTSRG 385 (526)
T ss_dssp CCCSSCSEEEEEEE---CSSCSSCC---------SSCCEEEEEESSC--C---CCTTSCCCCTTSEEEEEEEESSCCCCB
T ss_pred chHhhcchhhhhhh---hccccccc---------CCcceeeeccccc--c---cccccccccCCcceeeeccccCccccC
Confidence 11100000000000 01111100 1455554432111 1 111111111145566777788999999
Q ss_pred EEEeccCCCCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhccCC
Q psy1040 466 RLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTL 545 (614)
Q Consensus 466 ~v~l~s~d~~~~P~i~~~y~~~~~D~~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~ 545 (614)
+|++++.||.+.|+|+++|+.++.|++.++++++.++++++++.++.+.... ..|++ ..++++|+++++....
T Consensus 386 ~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~---~~pg~----~~~~~~~~~~ir~~~~ 458 (526)
T 3t37_A 386 SVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE---LLPGT----PNSAAEMDDFIARSVI 458 (526)
T ss_dssp EEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE---CSSCC----CCSHHHHHHHHHHHEE
T ss_pred cceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc---cCCCC----CCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999988887765443 34554 3578999999999999
Q ss_pred CcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCCCCCCCcchHHHHHHHHHHHHHHHHhh
Q psy1040 546 PENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGADMVKES 612 (614)
Q Consensus 546 ~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~P~~~~~Np~~ti~aia~r~Ad~I~~~ 612 (614)
+.+|++||||||+ |++||||++|||||++|||||||||||+++++||++|+||||||+||+-...
T Consensus 459 t~~H~~GTcrMG~--d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~~ 523 (526)
T 3t37_A 459 THHHPCGTCRMGK--DPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHHH 523 (526)
T ss_dssp ECSCCBCTTCBCS--STTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHS
T ss_pred cCcccCccccCCC--CCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999995 5679999999999999999999999999999999999999999999986543
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=7.8e-75 Score=640.19 Aligned_cols=475 Identities=24% Similarity=0.333 Sum_probs=345.5
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC--Ccccccccccc-ccCCcccccceecccccccccC-CCe
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP--TVTSVPGFAAS-AVGTHLDWKYKTERNKYACLST-GGI 148 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~--~~~~~p~~~~~-~~~~~~~w~~~~~~~~~~~~~~-~~~ 148 (614)
..+|||||||||+||+++|.||+| |++|||||||+... .....|..+.. +.. .+| |.+.+|. .+ ++.
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~--~~~-~~t~~q~----~~~~~~ 94 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ--EDD-GKTPVER----FVSEDG 94 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS--CCC-SSSSEEE----EECTTS
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC--CCc-CcCCCcc----ccCCCc
Confidence 357999999999999999999999 89999999998742 22223322221 112 134 5666654 23 566
Q ss_pred eeecCceeeccccccCCceeecCChhhHHHHHHcCCCCCChhhHHHHHHhhhcCCCCCCCCCCccCCCCCeeeeeCCCCC
Q psy1040 149 CEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYP 228 (614)
Q Consensus 149 ~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~~g~l~v~~~~~~~ 228 (614)
+.+++|++|||+|.+|+|+|.|+++.||+.+ | .+|+|++++|||+++|+.+.. . +...
T Consensus 95 ~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~-------~-----------~~~~ 152 (536)
T 1ju2_A 95 IDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVY-------K-----------PNSQ 152 (536)
T ss_dssp CEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCB-------C-----------CCCC
T ss_pred ceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCC-------C-----------CCCC
Confidence 7889999999999999999999999999642 1 249999999999999986431 0 1124
Q ss_pred chhHHHHHHHHHcCCCcC-CCCCCCcceeEEe-eccccCCcccccccccchhhhcCCCeEEEcccEEEEEEEcCC-CCeE
Q psy1040 229 PIGEDIIKAGKELGYASG-DFNGANQIGVNFA-QVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPK-TKRA 305 (614)
Q Consensus 229 ~~~~~~~~a~~~~G~~~~-d~~~~~~~g~~~~-~~~~~~g~r~s~~~~~L~~~~~~~n~~I~~~~~V~~I~~d~~-~~ra 305 (614)
+....+.++++++|++.. ..+.....|.... .....+|.|+++.. |+.. ++++|++|++++.|++|++++. ++++
T Consensus 153 ~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~-~~~~-~~~~~~~v~~~~~v~~i~~~~~~~~~~ 230 (536)
T 1ju2_A 153 SWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADE-LLNK-GNSNNLRVGVHASVEKIIFSNAPGLTA 230 (536)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESBCTTSBBCCGGG-GGGG-SCTTTEEEEESCEEEEEEECCSSSCBE
T ss_pred cHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEECCCCeEecHHH-hhhh-hcCCCcEEEeCCEEEEEEECCCCCCEE
Confidence 566788899999998542 1111111222110 11125788888776 6554 5789999999999999999842 2599
Q ss_pred EEEEEEeCCCCceEEEE--eccEEEEccCCCChHHHHHHhCCCCchhhhhcCCCcccccc-ccccccccccCceEEEEec
Q psy1040 306 LSVQFKDTNTNEIKTVK--AKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLR-VGYNLVHHVGANLKFSILD 382 (614)
Q Consensus 306 ~GV~~~~~~~g~~~~v~--A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~gi~~~~dlp-VG~nl~dH~~~~~~~~~~~ 382 (614)
+||++.+.+ |+.++++ +.|+||||||+|+||+||++|||||+++|+++||+++.|+| ||+|||||+.+ .+.+.++
T Consensus 231 ~GV~~~~~~-g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~-~~~~~~~ 308 (536)
T 1ju2_A 231 TGVIYRDSN-GTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRN-FINILPP 308 (536)
T ss_dssp EEEEEECTT-SCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEE-EEEECCS
T ss_pred EEEEEEeCC-CceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcce-eEEEEeC
Confidence 999998632 7766664 66799999999999999999999999999999999999999 99999999975 4555554
Q ss_pred CCCCCCCcch-HHHHhHHHhcCCCcccccccccccccccCCCcceeeccccccccccccccccCCCC-CCceEEeecccc
Q psy1040 383 NGVSDNNGEI-DEKGTYLEESNEGLSSMKGNMDEMLNDGRPGRSILSNTFNALFSNNNKEEDKMPCG-RRSIYARPTNLL 460 (614)
Q Consensus 383 ~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 460 (614)
.+........ .....|. ..+.|+++.. .+.+.+ +. ... ..+. .....+...+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~----------~~~~~~----~~----~~~-----~~~~~~~~~~~~~~l~~ 364 (536)
T 1ju2_A 309 NPIEPTIVTVLGISNDFY-QCSFSSLPFT----------TPPFGF----FP----SSS-----YPLPNSTFAHFASKVAG 364 (536)
T ss_dssp SCCCCCCCCEEEECSSEE-EEEEEECCCS----------SCCBTT----BS----SSC-----CCCCSSCEEEEEEEESS
T ss_pred CCcccccchhhhHHHHHH-HcCCCCCCCC----------hhhhee----ec----Ccc-----cCCCCcceEEEeeecCC
Confidence 3321100000 0001222 2222332211 011110 00 000 0111 111234456678
Q ss_pred cCcceEEEe-ccCCCCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCC------CCCCH
Q psy1040 461 PISRGRLVL-RSADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHF------EWDSN 533 (614)
Q Consensus 461 p~s~g~v~l-~s~d~~~~P~i~~~y~~~~~D~~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~p~~~~~------~~~s~ 533 (614)
|+|||+|+| +++||++.|+|+++|+.++.|++.++++++.+++++++..++++..... .+.|+|... ...++
T Consensus 365 P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~p~~~~~~~~~p~~~~~d 443 (536)
T 1ju2_A 365 PLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDL-PGVEGFNILGIPLPKDQTDD 443 (536)
T ss_dssp CSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCC-STTCSCCBSSSCCCSCTTCH
T ss_pred CCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhcccc-ccCCCccccccCCCcccCCH
Confidence 999999999 8999999999999999999999999999999999999988887654321 123433210 24589
Q ss_pred HHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCCCCCCCcchHHHHHHHHHHHHHHHH-hh
Q psy1040 534 EYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGADMVK-ES 612 (614)
Q Consensus 534 ~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~P~~~~~Np~~ti~aia~r~Ad~I~-~~ 612 (614)
++|++++|....+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+||||||+|+.|+ ++
T Consensus 444 ~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~ 517 (536)
T 1ju2_A 444 AAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQER 517 (536)
T ss_dssp HHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999 79999999999999999999999999999999999999999776554 54
Q ss_pred h
Q psy1040 613 W 613 (614)
Q Consensus 613 ~ 613 (614)
|
T Consensus 518 ~ 518 (536)
T 1ju2_A 518 S 518 (536)
T ss_dssp H
T ss_pred h
Confidence 4
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.6e-70 Score=609.44 Aligned_cols=487 Identities=21% Similarity=0.267 Sum_probs=355.5
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCCc-----------------cccccccccccCCccccccee
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTV-----------------TSVPGFAASAVGTHLDWKYKT 135 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~~-----------------~~~p~~~~~~~~~~~~w~~~~ 135 (614)
+.+|||||||||++|+++|.+|+++ |++|||||+|+..... ..+|.+...+ |.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~--- 74 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESL------FT--- 74 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGG------GT---
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHh------hc---
Confidence 4579999999999999999999998 9999999999864311 0111111100 10
Q ss_pred cccccccccC-CCeeeecCceeeccccccCCceeecCChhhHHH---HHHcCCCCCChhhHHHHHHhhhcCCCCCCCCCC
Q psy1040 136 ERNKYACLST-GGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDE---WQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPE 211 (614)
Q Consensus 136 ~~~~~~~~~~-~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~---w~~~g~~~w~~~~l~~y~~~~e~~~~~~~~~~~ 211 (614)
.+.. .. .....+++|++|||+|.+|+|+|.|+.+.||+. | +.+|+|++ |||++.|+..... .
T Consensus 75 ~~~~----~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~~---~- 140 (546)
T 1kdg_A 75 DSNP----FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPST---D- 140 (546)
T ss_dssp CSCC----TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCCB---S-
T ss_pred CCCc----cccccccccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCCC---c-
Confidence 0000 01 122456899999999999999999999999987 8 46788888 9999999865321 0
Q ss_pred ccCCCCCeeeeeCCCCCchhHHHHHHHHHcCCCcCCCC---CCCcceeEEeeccccCCcccccccccchhhhcCCCeEEE
Q psy1040 212 YHGYDGPLKVQRFSSYPPIGEDIIKAGKELGYASGDFN---GANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQ 288 (614)
Q Consensus 212 ~~~~~g~l~v~~~~~~~~~~~~~~~a~~~~G~~~~d~~---~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~n~~I~ 288 (614)
.+..+|+. +..+....+.++++++|++..+.+ .....|++.++.++.+|.|+++..+|+.++.+++|++|+
T Consensus 141 ~~~~~g~~------~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~ 214 (546)
T 1kdg_A 141 HPSTDGQR------YLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFK 214 (546)
T ss_dssp CCSTTSCC------CSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEE
T ss_pred cCCCCCCc------cCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEE
Confidence 22233321 335666788899999998764322 123557777788888999999998999999888999999
Q ss_pred cccEEEEEEEcCCCCeEEEEEEEeCCCCc--eEEEEeccEEEEccCCCChHHHHHHhCCCCchhhhhc------CCCcc-
Q psy1040 289 LNAHVMKLNIDPKTKRALSVQFKDTNTNE--IKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDEL------GIETI- 359 (614)
Q Consensus 289 ~~~~V~~I~~d~~~~ra~GV~~~~~~~g~--~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l~~~------gi~~~- 359 (614)
+++.|++|+++ +++++||++.+..+|+ ..++.+.|+||||||+++||+||++|||||+++|+++ ||+++
T Consensus 215 ~~~~V~~i~~~--~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~ 292 (546)
T 1kdg_A 215 TNVMVSNVVRN--GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPP 292 (546)
T ss_dssp CSCCEEEEEEE--TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCC
T ss_pred eCCEEEEEEEe--CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCccccc
Confidence 99999999998 6799999997632254 3456555799999999999999999999999999999 58874
Q ss_pred ----ccccccccccccccCceEEEEecCCC-C---C---CCc-chHHHHhHHHhcCCCccccccccccccc--cc----C
Q psy1040 360 ----SDLRVGYNLVHHVGANLKFSILDNGV-S---D---NNG-EIDEKGTYLEESNEGLSSMKGNMDEMLN--DG----R 421 (614)
Q Consensus 360 ----~dlpVG~nl~dH~~~~~~~~~~~~~~-~---~---~~~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~--~~----~ 421 (614)
+|+|||+|||||+.+ .+.+.. ... . . ... .......|+ ..+.|+++.......|++ .. .
T Consensus 293 ~~~~~dlpVG~nL~DH~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (546)
T 1kdg_A 293 QNQWINLPVGMNAQDNPSI-NLVFTH-PSIDAYENWADVWSNPRPADAAQYL-ANQSGVFAGASPKLNFWRAYSGSDGFT 369 (546)
T ss_dssp GGGCBCCCTTTTBBCCCCE-EEEEEC-TTCCCGGGGTTTTTSCCHHHHHHHH-HHSCSGGGSCSCCEEEEEEEECTTSCE
T ss_pred ccccccCCcccCcccCcce-eEEEec-CCcccccchhhhhcchhHHHHHHHH-HcCCcccccCCcceEEEEccCCCCcch
Confidence 899999999999985 455552 221 1 0 000 113346677 667888765321113433 10 1
Q ss_pred CCcceeeccccccccccccccccCCCC-CCceEEeeccccc-CcceEEEeccCCCCCCCEEEeCCCCCHHHHHHHHHHHH
Q psy1040 422 PGRSILSNTFNALFSNNNKEEDKMPCG-RRSIYARPTNLLP-ISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIR 499 (614)
Q Consensus 422 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p-~s~g~v~l~s~d~~~~P~i~~~y~~~~~D~~~l~~~~~ 499 (614)
++++..+.... . . ... ..+.. ...+++...+++| .|||+|+|+|+| ..|.|+++|+.++.|++.++++++
T Consensus 370 ~~~~~~~~~~~--~--~-~~~-~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~ 441 (546)
T 1kdg_A 370 RYAQGTVRPGA--A--S-VNS-SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALH 441 (546)
T ss_dssp EEEEEEEEESC--S--C-CCC-SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHH
T ss_pred hhhhheecccc--c--c-ccc-ccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHH
Confidence 12222111100 0 0 000 00111 2446666677788 999999999987 457889999999999999999999
Q ss_pred HHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcE
Q psy1040 500 IIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLR 579 (614)
Q Consensus 500 ~~~~i~~~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~ 579 (614)
.+++++++... ... ..|++ ..+++++.++++....+.+|++||||||++ ++++|||++|||||++|||
T Consensus 442 ~~~~~~~~~~~----~~~---~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~-~~~~VVD~~lrV~Gv~nLr 509 (546)
T 1kdg_A 442 DVVSNIGSIPG----LTM---ITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSS-PQSAVVDSNVKVFGTNNLF 509 (546)
T ss_dssp HHTTTGGGSTT----CEE---EESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSC-TTTCSBCTTCBBTTCSSEE
T ss_pred HHHHHhcCCCc----ccc---cCCCC----CCCHHHHHHHHHHhcCcccccccceecCCC-CCCeeECCCCeEccCCCcE
Confidence 99998765421 110 23432 246778888888888889999999999975 3589999999999999999
Q ss_pred EeccCCCCCCCCcchHHHHHHHHHHHHHHHHhhhC
Q psy1040 580 VMDASIFPTNINSNPIATIIMIAEKGADMVKESWR 614 (614)
Q Consensus 580 V~DaSv~P~~~~~Np~~ti~aia~r~Ad~I~~~~~ 614 (614)
|+||||||+++++||++|+||||||+||+|++++.
T Consensus 510 VvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 544 (546)
T 1kdg_A 510 IVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAG 544 (546)
T ss_dssp ECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred EeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999873
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=2.7e-66 Score=568.93 Aligned_cols=453 Identities=18% Similarity=0.214 Sum_probs=325.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCC-c--cccccccccccCCcccccceecccc----------
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPT-V--TSVPGFAASAVGTHLDWKYKTERNK---------- 139 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~-~--~~~p~~~~~~~~~~~~w~~~~~~~~---------- 139 (614)
..+||+||||+|++|+++|.+|++. |++|+|||+|+.... . ...+... .......+|.|.++|+.
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~ 80 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVV 80 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCccccccccccccccccccccccc
Confidence 3469999999999999999999997 999999999985431 1 1222211 11234578999988762
Q ss_pred ----ccccc----C-CCeeeecCceeeccccccCCceeecCChhhHHHHHHcCCCCCChhhHH-HHHHhhhcCCCCCCCC
Q psy1040 140 ----YACLS----T-GGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVL-RYFIKSEHNLNRDQVD 209 (614)
Q Consensus 140 ----~~~~~----~-~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~y~~~~e~~~~~~~~~ 209 (614)
..+.+ . ++.+.|++|++|||+|.+|+|+|.|+++.||+.|. ++|.|++++ |||+++|+++.+....
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~ 156 (504)
T 1n4w_A 81 NRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHID 156 (504)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC
T ss_pred cccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCC
Confidence 11221 2 56788999999999999999999999999999995 689999999 9999999977642111
Q ss_pred CCccCCCCCeeeeeCCCCCchhHHHHHHHHHcCC-----CcC-CCCC---------CCcceeEEeeccccCCcccccccc
Q psy1040 210 PEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGY-----ASG-DFNG---------ANQIGVNFAQVMVDNGVRSSTPRM 274 (614)
Q Consensus 210 ~~~~~~~g~l~v~~~~~~~~~~~~~~~a~~~~G~-----~~~-d~~~---------~~~~g~~~~~~~~~~g~r~s~~~~ 274 (614)
..++ ...+ ..+..+.|.++++++|+ +.. ++|+ ..+..++.|...|.+| |+++..+
T Consensus 157 ~~~~--------~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~ 226 (504)
T 1n4w_A 157 TKWF--------EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKT 226 (504)
T ss_dssp HHHH--------HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTT
T ss_pred cccc--------cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHH
Confidence 0011 0000 13567889999999999 432 3331 1233344555667899 9999999
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCC---ceEEEEeccEEEEccCCCChHHHHHHhC-CCCchh
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTN---EIKTVKAKKEIILTAGAIGSPQLLMLSG-VGPKSH 350 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g---~~~~v~A~k~VVlaaG~i~sp~LLl~SG-ig~~~~ 350 (614)
||.++.+++|++|++++.|++|++++++++++||++.+.+ | +..+|+|+ +||||||+|+||+|||+|| ||
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~-g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig---- 300 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTD-GKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG---- 300 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTT-CCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT----
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCC-CccceeEEEeeC-EEEEccCCCCCHHHHHhccccC----
Confidence 9999888889999999999999998533599999998532 6 56789996 9999999999999999999 87
Q ss_pred hhhcCCCccccccccccccccccCceEEEEecCCCCCCCcchHHHHhHHHhcCCCccccccccccccc-c-c-CCCccee
Q psy1040 351 LDELGIETISDLRVGYNLVHHVGANLKFSILDNGVSDNNGEIDEKGTYLEESNEGLSSMKGNMDEMLN-D-G-RPGRSIL 427 (614)
Q Consensus 351 l~~~gi~~~~dlpVG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~f~~-~-~-~p~~~~~ 427 (614)
||+++.+ .||+||+||+.+ .+.+... .. ...|++.......+|.. . . .|++++.
T Consensus 301 ----~i~~~~~-~VG~nl~dh~~~-~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (504)
T 1n4w_A 301 ----TLPNLNS-EVGAGWGPNGNI-MTARANH-MW----------------NPTGAHQSSIPALGIDAWDNSDSSVFAEI 357 (504)
T ss_dssp ----SSTTCCT-TTTCCBBCTTCE-EEEEECC-TT----------------CCCCSCCCSSCCEEEEECCSSTTCEEEEE
T ss_pred ----CCCCCCh-hhccccccCCcc-eeeeccC-CC----------------CcccCcCCCccEEEEeccCCCCCceEEEe
Confidence 6777655 399999999975 3333221 10 01122221000002222 1 1 3443332
Q ss_pred eccccccccccccccccCCCCCCceEEeecccccCcceEEEeccCCCCCCCEEEeCCCCCHHHHHHHHHHHH-HHHHHHh
Q psy1040 428 SNTFNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIR-IIQKLTR 506 (614)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~P~i~~~y~~~~~D~~~l~~~~~-~~~~i~~ 506 (614)
+. +... + ...+.++..+++|.|+|+|+|+++|| .|+++|+.++ | +.++++++ .+++|++
T Consensus 358 ~~-----~~~~--------~-~~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~ 417 (504)
T 1n4w_A 358 AP-----MPAG--------L-ETWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINK 417 (504)
T ss_dssp EC-----CCCS--------S-CCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHH
T ss_pred cc-----CChH--------H-HhhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHh
Confidence 21 0000 0 12344566667899999999998775 7999999999 8 77888888 8888876
Q ss_pred chhhhhcccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCCC
Q psy1040 507 TKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIF 586 (614)
Q Consensus 507 ~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv~ 586 (614)
+... . |+.+. +.. + |+++ ...+.+|++|||||| +|||++|||||++||||+|+|||
T Consensus 418 ~~~~------~-----~~~~~--~~~-~-~~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~ 473 (504)
T 1n4w_A 418 ANGT------I-----YRYDL--FGT-Q-LKAF---ADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLI 473 (504)
T ss_dssp HHTC------C-----BCCSS--SSS-S-CCSE---ECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGS
T ss_pred ccCC------C-----cCCch--hhh-h-hhhh---ccCccccccCCceee------eEECCCCeEeccCCeEEeecccc
Confidence 5331 1 11110 000 0 1111 457789999999999 89999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhhC
Q psy1040 587 PTNINSNPIATIIMIAEKGADMVKESWR 614 (614)
Q Consensus 587 P~~~~~Np~~ti~aia~r~Ad~I~~~~~ 614 (614)
|+++++||++|+||||||+||+|+++|.
T Consensus 474 P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 474 PGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp CSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999873
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=7.9e-65 Score=557.37 Aligned_cols=450 Identities=17% Similarity=0.206 Sum_probs=320.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCCcccccc---ccccc-cCCcccccceeccccc--------
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPG---FAASA-VGTHLDWKYKTERNKY-------- 140 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~~~~~-------- 140 (614)
..+||+||||+|++|+++|.+|++. |++|+|||+|..... ..|. +.... .....+|.|.++||..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 5679999999999999999999997 999999999986532 2232 11112 2346899999988621
Q ss_pred -----cccc-----CCCeeeecCceeeccccccCCceeecCChhhHHHHHHcCCCCCChhhHH-HHHHhhhcCCCCCCCC
Q psy1040 141 -----ACLS-----TGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVL-RYFIKSEHNLNRDQVD 209 (614)
Q Consensus 141 -----~~~~-----~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~y~~~~e~~~~~~~~~ 209 (614)
.+.+ .++.+.|++|++|||+|.+|+|+|.|+++.||+.|. ++|.|++++ |||+++|+++.+....
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~ 161 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNID 161 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCCC
Confidence 1111 155788999999999999999999999999999995 478999999 9999999987642110
Q ss_pred CCccCCCCCeeeeeCCC-CCchhHHHHHHHHHcCC-----CcC-CCCC---------CCcceeEEeeccccCCccccccc
Q psy1040 210 PEYHGYDGPLKVQRFSS-YPPIGEDIIKAGKELGY-----ASG-DFNG---------ANQIGVNFAQVMVDNGVRSSTPR 273 (614)
Q Consensus 210 ~~~~~~~g~l~v~~~~~-~~~~~~~~~~a~~~~G~-----~~~-d~~~---------~~~~g~~~~~~~~~~g~r~s~~~ 273 (614)
.... ... ..+..+.|.++++++|+ +.. ++|+ ..+..++.|..+|.+| |+++..
T Consensus 162 -------~~~~---~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~ 230 (507)
T 1coy_A 162 -------QAWF---ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDK 230 (507)
T ss_dssp -------HHHH---HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTT
T ss_pred -------Cccc---cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHH
Confidence 0000 011 14567889999999999 443 3332 1122344555567889 999999
Q ss_pred ccchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCC---ceEEEEeccEEEEccCCCChHHHHHHhC-CCCch
Q psy1040 274 MFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTN---EIKTVKAKKEIILTAGAIGSPQLLMLSG-VGPKS 349 (614)
Q Consensus 274 ~~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g---~~~~v~A~k~VVlaaG~i~sp~LLl~SG-ig~~~ 349 (614)
+||.++.+++|++|++++.|++|++++++++++||++.+.+ | +.++|+|+ +||||||+|+||+|||+|| ||
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~-g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG--- 305 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQ-GNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKAQG--- 305 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTT-SCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCC-CcccccEEEEeC-EEEEccCccCCHHHHHhcccCC---
Confidence 99999988889999999999999998432489999998632 5 46789996 9999999999999999999 87
Q ss_pred hhhhcCCCccccccccccccccccCceEEEEecCCCCCCCcchHHHHhHHHhcCCCcccccccccc--cccc-cCCCcce
Q psy1040 350 HLDELGIETISDLRVGYNLVHHVGANLKFSILDNGVSDNNGEIDEKGTYLEESNEGLSSMKGNMDE--MLND-GRPGRSI 426 (614)
Q Consensus 350 ~l~~~gi~~~~dlpVG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~--f~~~-~~p~~~~ 426 (614)
++|+..|. ||+||++|+.. ...+..-. ....|++........ ++.+ ..|++++
T Consensus 306 -----~lpnl~d~-VG~~l~~h~~~-~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (507)
T 1coy_A 306 -----HLPNLSSQ-VGEGWGNNGNI-MVGRANHM-----------------WDATGSKQATIPTMGIDNWADPTAPIFAE 361 (507)
T ss_dssp -----SSTTSCTT-TTCCBBCTTEE-EEEEECCT-----------------TSCCCSCCCSSCCEEEECTTCTTSCEEEE
T ss_pred -----CCCccChh-hCCccccCCcc-cccccccc-----------------cccccccCCCcceEEEeccCCCCCCcEEE
Confidence 24433332 99999999863 22111100 112222221110001 1110 1343333
Q ss_pred eeccccccccccccccccCCCCCCceEEeecccccCcceEEEeccCCCCCCCEEEeCCCCCHHHHHHHHHHHH-HHHHHH
Q psy1040 427 LSNTFNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIR-IIQKLT 505 (614)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~P~i~~~y~~~~~D~~~l~~~~~-~~~~i~ 505 (614)
.. . +... + ...+.++..+++|.|+|+|+|+++|| .|+++|+.++ | ..+.++++ .+++++
T Consensus 362 ~~-~----~~~~-----~----~~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~ 421 (507)
T 1coy_A 362 IA-P----LPAG-----L----ETYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKIN 421 (507)
T ss_dssp EE-C----CCCS-----S----CCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHH
T ss_pred ec-c----CCHH-----H----hhheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHH
Confidence 22 1 1000 0 12344555667899999999998765 8999999999 8 56777777 888887
Q ss_pred hchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhccCCCcccccccccccCCCCCCCccCCCCcEecCCCcEEeccCC
Q psy1040 506 RTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASI 585 (614)
Q Consensus 506 ~~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GT~rMG~~~d~~~VVD~~lrV~gv~nL~V~DaSv 585 (614)
++.. . +...+. +.+++ +++ ...+.+|++|||||| +|||++|||||++||||+|+||
T Consensus 422 ~~~~-----~-~~~~~~-------~~~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv 477 (507)
T 1coy_A 422 QKEG-----T-IYRTDL-------FGVYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSL 477 (507)
T ss_dssp HHHT-----C-CBCSSC-------C--CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGG
T ss_pred hhcC-----C-cccCcc-------cccch--hhh---cccccccccCCcchh------heECCCCeEeccCCeEEeechh
Confidence 6433 1 111111 11111 111 356789999999999 5999999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHhhh
Q psy1040 586 FPTNINSNPIATIIMIAEKGADMVKESW 613 (614)
Q Consensus 586 ~P~~~~~Np~~ti~aia~r~Ad~I~~~~ 613 (614)
||+++++||++|+||||||+||+|+++.
T Consensus 478 ~P~~~~~Np~~ti~alAeraAd~I~~~~ 505 (507)
T 1coy_A 478 VPGNVGVNPFVTITALAERNMDKIISSD 505 (507)
T ss_dssp SCSCCSSCSHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=2.5e-50 Score=450.95 Aligned_cols=482 Identities=15% Similarity=0.152 Sum_probs=297.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCCcccccc---cc------ccc--------cC----------
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPG---FA------ASA--------VG---------- 126 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~~~~~p~---~~------~~~--------~~---------- 126 (614)
.+||+||||||++|+++|.+|++. |++|+|||+++.......-+. .. ..+ ..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~~ 123 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVV 123 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccccc
Confidence 469999999999999999999998 999999999876542110000 00 000 00
Q ss_pred ---CcccccceecccccccccCCCeeee----cCceeeccccccCCceeecCChhhHHHHHHcCCCCC-ChhhHHHHHHh
Q psy1040 127 ---THLDWKYKTERNKYACLSTGGICEW----PRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGW-GFSDVLRYFIK 198 (614)
Q Consensus 127 ---~~~~w~~~~~~~~~~~~~~~~~~~~----~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w-~~~~l~~y~~~ 198 (614)
...+|......-...+........+ ..+..+||.+.+|.+...|..+.+ .+....+.++ .++++.++|++
T Consensus 124 ~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~~l~~~~v~~~~~l~~~~~~ 201 (623)
T 3pl8_A 124 DTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPLLVKDDADADDAEWDRLYTK 201 (623)
T ss_dssp CCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCCSSTTCHHHHHHHHHHHHHH
T ss_pred ccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHH--hhhhhcccCccChhhHHHHHHH
Confidence 0001111000000000000000111 246678999999999888887653 1100111111 35677888988
Q ss_pred hhcCCCCCCCCCCccCCCCCeeeeeCCCCCchhHH-HHHHHHHcCCCcCCCCCCCcceeEEeeccccCCcccccccccch
Q psy1040 199 SEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGED-IIKAGKELGYASGDFNGANQIGVNFAQVMVDNGVRSSTPRMFLR 277 (614)
Q Consensus 199 ~e~~~~~~~~~~~~~~~~g~l~v~~~~~~~~~~~~-~~~a~~~~G~~~~d~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~ 277 (614)
.+....... +. +....... ....+.........+.. ....... ......|+++..+++.
T Consensus 202 ~~~l~~vgg---------~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~-~p~a~~~---~~~~~~r~s~~~~~l~ 261 (623)
T 3pl8_A 202 AESYFQTGT---------DQ-------FKESIRHNLVLNKLTEEYKGQRDFQQ-IPLAATR---RSPTFVEWSSANTVFD 261 (623)
T ss_dssp HHHHHTEES---------CT-------TTTCHHHHHHHHHHHHHTTTTSCCEE-CCEEEEE---EETTEEEECCHHHHCC
T ss_pred HHHhccccc---------cc-------ccCccccccchHHHHHhhhhcccccc-cchhhcc---CCCCccccchHHhhhh
Confidence 877654210 00 11111111 11112111110000000 0000000 0123457777778887
Q ss_pred hh------hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCCCchhh
Q psy1040 278 DK------YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHL 351 (614)
Q Consensus 278 ~~------~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig~~~~l 351 (614)
++ .+++|++|++++.|++|++++++++++||++.+..+|+..++.|+ +||||+|++.||+||++||||++.+|
T Consensus 262 ~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL~~sgiG~~~~l 340 (623)
T 3pl8_A 262 LQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLLVNSGFGQLGRP 340 (623)
T ss_dssp CCCEEETTEEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHHHTTTSSCCSSC
T ss_pred hhhcchhhccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHHHhcCCCccccc
Confidence 77 677899999999999999985446999999987433888899996 99999999999999999999999999
Q ss_pred hhcCCCcccccc-ccccccccccCceEEEEecCCCC----------------CC-----Cc--------ch-HHHHh-HH
Q psy1040 352 DELGIETISDLR-VGYNLVHHVGANLKFSILDNGVS----------------DN-----NG--------EI-DEKGT-YL 399 (614)
Q Consensus 352 ~~~gi~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~----------------~~-----~~--------~~-~~~~~-~~ 399 (614)
+.+||++ |+| ||+||+||+.. .+.+.+++... .. .. .+ ..+.+ |.
T Consensus 341 ~~~~i~~--~l~~vG~nl~dh~~~-~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~ 417 (623)
T 3pl8_A 341 NPANPPE--LLPSLGSYITEQSLV-FCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMM 417 (623)
T ss_dssp CTTSCCS--SCTTTTBSCBCCCEE-EEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHH
T ss_pred cccCCCC--CCcccccchhhCcCc-eEEEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhh
Confidence 9999998 999 99999999985 56666653210 00 00 00 11111 21
Q ss_pred HhcCCCcccccccccccccccCCCcceee-ccccccccccccccccC------CCC-CCc--eEEeecccccCcceEEEe
Q psy1040 400 EESNEGLSSMKGNMDEMLNDGRPGRSILS-NTFNALFSNNNKEEDKM------PCG-RRS--IYARPTNLLPISRGRLVL 469 (614)
Q Consensus 400 ~~~~~G~~~~~~~~~~f~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~------~~~-~~~--~~~~~~~~~p~s~g~v~l 469 (614)
....+++..+. .. + .|++..-+ .+++ |..++.+..+. .+. ... +..+.. ..|.++|+|+|
T Consensus 418 -~~~~~~~~~~~--~~-~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~p~~~n~v~L 487 (623)
T 3pl8_A 418 -QHQEDPLPIPF--ED-P---EPQVTTLFQPSHP--WHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGR-TEPKEENKLWF 487 (623)
T ss_dssp -HCTTCCCSSCT--TC-C---CCEEECCCBTTBC--EEEEEECCSCCCSCCCCSSCGGGEEEEEEEEC-CCCCTTCEEEE
T ss_pred -ccccccccccc--cc-c---cccccccccccCc--chhhhhhhhccccccccccccceEEEEEEEEe-eccCCCCEEEE
Confidence 22233332110 00 0 01111100 0000 11111111110 011 111 222333 45999999999
Q ss_pred cc--CCCCCCCEEEeCCCCCHH-HHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhccCCC
Q psy1040 470 RS--ADPFEYPKIHSNYLVMKQ-DIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLP 546 (614)
Q Consensus 470 ~s--~d~~~~P~i~~~y~~~~~-D~~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~ 546 (614)
++ +|+++.|+++++|..++. |++.+.++++.+.++++ .+|+.... ..+ .| ....+
T Consensus 488 ~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-----~~g~~~~~-~~~-----------~~-----~~~~~ 545 (623)
T 3pl8_A 488 SDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSA-----KIGGFLPG-SLP-----------QF-----MEPGL 545 (623)
T ss_dssp EEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHT-----TTEEECTT-SCS-----------EE-----CCTTT
T ss_pred CCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHH-----hcCCcccC-chh-----------hc-----cCCCC
Confidence 87 899999999999999999 99999999999999865 34443211 000 00 01366
Q ss_pred cccccccccccCCCCCCCcc-CCCCcEecCCCcEEeccCCCCCCCCcchHHHHHHHHHHHHHHHHhhhC
Q psy1040 547 ENHPGGTCKMGPADDYSSVV-DAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGADMVKESWR 614 (614)
Q Consensus 547 ~~H~~GT~rMG~~~d~~~VV-D~~lrV~gv~nL~V~DaSv~P~~~~~Np~~ti~aia~r~Ad~I~~~~~ 614 (614)
++|++||||||++++.+||| |+++||||++||||+|+|+||+++++||++|+||||+|+||+|+++++
T Consensus 546 ~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~ 614 (623)
T 3pl8_A 546 VLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFT 614 (623)
T ss_dssp TCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhh
Confidence 89999999999864458998 999999999999999999999999999999999999999999999874
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.60 E-value=1.5e-14 Score=158.59 Aligned_cols=63 Identities=17% Similarity=0.343 Sum_probs=50.9
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCC-hHHHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIG-SPQLLM 341 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~-sp~LLl 341 (614)
|...+++.|++|+++++|++|+.++ +++|+||++.+. ++..+|+|+|.||||+|++. ++.+|.
T Consensus 208 L~~~~~~~Gv~i~~~t~v~~L~~~~-~g~v~GV~~~~~--g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 208 LVETAEKLGVRAEYDMRVQTLVTDD-TGRVVGIVAKQY--GKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECT-TCCEEEEEEEET--TEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCEEEecCEeEEEEECC-CCcEEEEEEEEC--CcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 3344455699999999999999874 489999999876 78889999768999999998 455443
No 13
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.46 E-value=1.6e-12 Score=142.02 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=40.8
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLM 341 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl 341 (614)
|...+++.|++|+++++|++|+.+ +++++||++.++ + ++.|+ .||++++...+.+.|+
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g---~--~~~ad-~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDG---R--RFLTQ-AVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTS---C--EEECS-CEEECCC---------
T ss_pred HHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCC---c--EEEcC-EEEECCCHHHHHHHhc
Confidence 344456779999999999999998 789999998664 2 68897 6999999888877665
No 14
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.42 E-value=9.1e-13 Score=146.16 Aligned_cols=61 Identities=21% Similarity=0.403 Sum_probs=48.6
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCC-CeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKT-KRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~-~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
|...+++.|++|+++++|++|+.+ + ++|+||++...+ |+..+|+|+ .||||+|++...+-|
T Consensus 256 L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~-g~~~~i~A~-~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 256 LRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKH-TGYYMIGAK-SVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETT-TEEEEEEEE-EEEECCCCCTTCHHH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCC-CcEEEEEcC-EEEEecCCcccCHHH
Confidence 444445678999999999999987 5 899999988632 777789994 899999999864433
No 15
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.38 E-value=1.3e-12 Score=145.07 Aligned_cols=61 Identities=20% Similarity=0.267 Sum_probs=48.2
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
.|...+++.|++|+++++|++|+.++ +++|+||++.+.+ |+..+|+|+ .||||+|++...+
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~-g~~~~i~a~-~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMY-KGYYWVKAD-AVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETT-TEEEEEECS-EEEECCCCCTTCH
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCC-CcEEEEECC-eEEEeCCCcccCH
Confidence 34444456799999999999999873 3899999988732 777889997 6999999997533
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.29 E-value=1.4e-11 Score=137.16 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=46.6
Q ss_pred hhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 278 DKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 278 ~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
..+.+.|++|++++.|++|+.+ +++|+||.+.+..+|+...|+|+ .||||+|++..
T Consensus 163 ~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 163 GRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 3445689999999999999987 68999999876333888889995 89999999864
No 17
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.28 E-value=1.2e-11 Score=128.99 Aligned_cols=62 Identities=18% Similarity=0.323 Sum_probs=45.1
Q ss_pred hhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHh-CC
Q psy1040 277 RDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLS-GV 345 (614)
Q Consensus 277 ~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~S-Gi 345 (614)
...+++.|++|+++++|++|..++ +.++.|.+. + |+..+++|+ .||+|+|++ |.+|+... |+
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~~-~--g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRP--EGGFELDFG-G--AEPMTLSCR-VLINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECT--TSSEEEEEC-T--TSCEEEEEE-EEEECCGGG-HHHHHHTEETS
T ss_pred HHHHHHCCCEEECCCEEEEEEEcC--CceEEEEEC-C--CceeEEEeC-EEEECCCcc-hHHHHHHhcCC
Confidence 334456789999999999999873 333345442 2 655689997 699999987 77877766 65
No 18
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.27 E-value=2.9e-11 Score=135.54 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=45.5
Q ss_pred hhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 279 KYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 279 ~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
.+.+.|++|++++.|++|+.+ +++|+||.+.+..+|+...++|+ .||||+|++..
T Consensus 167 ~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 167 ECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 334568999999999999987 68999999876333777889996 89999999864
No 19
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.26 E-value=9.8e-12 Score=130.72 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=44.4
Q ss_pred hhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 277 RDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 277 ~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
...+++.|++|+++++|++|..+ +++++||++. . | +++|+ .||+|+|++ |+.|+...|+
T Consensus 156 ~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~-~--g---~i~a~-~VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 156 AVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTN-K--G---IIKTG-IVVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHHHTTCEEECSCCEEEEEES--SSBEEEEEET-T--E---EEECS-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHCCCEEECCceEEEEEEE--CCEEEEEEEC-C--c---EEECC-EEEECcchh-HHHHHHHcCC
Confidence 33445678999999999999987 5788888752 2 3 68997 699999986 6666655553
No 20
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.25 E-value=3.1e-11 Score=133.81 Aligned_cols=63 Identities=19% Similarity=0.316 Sum_probs=48.8
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCC-CeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh-HHHHH
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKT-KRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS-PQLLM 341 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~-~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s-p~LLl 341 (614)
.|...+++.|++|+++++|++|+.+ + ++|+||++.+.+ |+..+|+|+ .||||+|++.. +.++.
T Consensus 260 ~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~-G~~~~i~A~-~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 260 VLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEY-TGYYVIKAD-AVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETT-TEEEEEECS-EEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCC-CcEEEEEcC-EEEEeCCCCccCHHHHH
Confidence 3444445679999999999999987 5 899999988632 777889995 89999999974 44443
No 21
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.25 E-value=1.8e-11 Score=135.33 Aligned_cols=64 Identities=19% Similarity=0.111 Sum_probs=52.8
Q ss_pred hhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCC
Q psy1040 279 KYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVG 346 (614)
Q Consensus 279 ~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig 346 (614)
.+.+.|++|+++++|++|..+ +++++||++.+..+|+..+|+|+ .||+|+|++ +..|+...|+.
T Consensus 179 ~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 179 EAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAK-KVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEE-EEEECCGGG-HHHHHHTTTCC
T ss_pred HHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECC-EEEECCCcc-hHHHHHhcCCC
Confidence 344579999999999999998 68999999987544777899996 799999976 77887776654
No 22
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.25 E-value=5.6e-11 Score=131.94 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=45.4
Q ss_pred hhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 278 DKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 278 ~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
..+.+.|++|++++.|++|+.++ +++++||.+.+..+|+..+|+|+ .||||+|++..
T Consensus 151 ~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 151 QQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 33345699999999999999853 47899999876333777889995 89999999864
No 23
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.25 E-value=1.9e-11 Score=129.40 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=43.8
Q ss_pred hhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 277 RDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 277 ~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
...+++.|++|+++++|++|..+ ++++++|++. + | +++|+ .||+|+|++ ++.++...|+
T Consensus 181 ~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~-~--g---~~~a~-~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 181 ARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTT-R--G---TIHAG-KVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHHHHTTCEEECSCCEEEEEES--SSBEEEEEET-T--C---CEEEE-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeC-C--c---eEECC-EEEECCchh-HHHHHHHcCC
Confidence 33445678999999999999987 5678888753 2 4 58896 699999976 5566655553
No 24
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.24 E-value=6.6e-11 Score=130.10 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=45.0
Q ss_pred hhhcCCCeEEEcccEEEEEEEcCCCC------eEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 278 DKYKQDNLKVQLNAHVMKLNIDPKTK------RALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 278 ~~~~~~n~~I~~~~~V~~I~~d~~~~------ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
.+.+..|++|++++.|++|+.++ ++ +++||.+.+..+|+..+++|+ .||+|+|++..
T Consensus 147 ~~~~~~gv~i~~~~~v~~L~~~~-~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 147 KALNHPNIRVLERTNAVDLIVSD-KIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp HHHHCTTEEEECSEEEEEEEEGG-GTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred HHHcCCCCEEEeCcEEEEEEEcC-CCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 33344799999999999999842 34 999999986322777889995 89999999864
No 25
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.24 E-value=1.3e-11 Score=129.57 Aligned_cols=36 Identities=31% Similarity=0.497 Sum_probs=32.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+.++||||||||++|+++|++|+ + |++|+||||++.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCC
Confidence 34689999999999999999999 6 999999999854
No 26
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.20 E-value=1.4e-10 Score=128.42 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=50.0
Q ss_pred hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 280 ~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
+.+.|++|+++++|++|..+ ++++.||++.+..+|+..+|+|+ .||+|+|++ +..|+...|+
T Consensus 198 a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 198 AAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCCS
T ss_pred HHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhcc
Confidence 44678999999999999988 67999999887433666789996 799999987 7777765553
No 27
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.18 E-value=6.4e-11 Score=125.23 Aligned_cols=36 Identities=44% Similarity=0.625 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|++|+++ |++|+||||+..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 359999999999999999999999 999999999854
No 28
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.18 E-value=4.5e-11 Score=133.87 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=42.9
Q ss_pred CeEEEcccEEEEEEEcCC-CCeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 284 NLKVQLNAHVMKLNIDPK-TKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 284 n~~I~~~~~V~~I~~d~~-~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
|++|+.++.|++|+.+++ .++|+||.+.+..+|+...|+|+ .||||+|+++.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKAN-AMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeC-EEEECCCcccc
Confidence 899999999999999731 14999999876433788889995 89999999863
No 29
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.18 E-value=3.9e-11 Score=128.63 Aligned_cols=56 Identities=21% Similarity=0.240 Sum_probs=43.3
Q ss_pred chhhhcCCCeEEEccc---EEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 276 LRDKYKQDNLKVQLNA---HVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~---~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
|...+++.|++|++++ +|++|..+ +++++||++.+ | .+++|+ .||+|+|++ |++|+
T Consensus 167 L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~---G--~~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 167 AAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTAD---G--KIWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETT---T--EEEECS-EEEECCGGG-GGGTS
T ss_pred HHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECC---C--CEEECC-EEEECCCCC-hhhhc
Confidence 3344456789999999 99999987 67899998754 3 268997 699999987 55543
No 30
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.13 E-value=2.6e-10 Score=127.95 Aligned_cols=57 Identities=16% Similarity=0.134 Sum_probs=44.6
Q ss_pred hhhhcCC-Ce-EEEcccEEEEEEEcCCCC---eEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 277 RDKYKQD-NL-KVQLNAHVMKLNIDPKTK---RALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 277 ~~~~~~~-n~-~I~~~~~V~~I~~d~~~~---ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
...+++. |+ +|++++.|++|+.+ ++ +|+||.+.+..+|+...|+|+ .||+|+|++..
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 3333444 89 99999999999987 44 999999865333777789995 89999999865
No 31
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.11 E-value=2.1e-10 Score=120.64 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=33.0
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+|||||||||++|+++|++|+++ |++|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 58999999999999999999999 999999999854
No 32
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.11 E-value=7.2e-10 Score=123.31 Aligned_cols=54 Identities=9% Similarity=0.212 Sum_probs=44.1
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSP 337 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp 337 (614)
+.+|++|++++.|++|+.+ +++++||.+.+..+|+..+++|+ .||+|+|++...
T Consensus 146 ~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp TCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred hCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 3445999999999999987 68999998875323777789996 699999998654
No 33
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.11 E-value=2.5e-10 Score=132.31 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=45.0
Q ss_pred hhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 277 RDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 277 ~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
...+++.|++|+++++|++|..+ ++++++|++.+ | +++|+ .||+|+|++ ++.|+...|+
T Consensus 158 ~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~---G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 158 IKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTAD---G---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETT---E---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECC---c---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 33445578999999999999987 57888887532 3 68997 699999986 6777666654
No 34
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.07 E-value=1.2e-10 Score=125.35 Aligned_cols=34 Identities=41% Similarity=0.587 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC-CeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN-WKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG 108 (614)
.+|||||||||++|+++|++|+++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 579999999999999999999999 9 999999994
No 35
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.05 E-value=5.8e-10 Score=126.29 Aligned_cols=36 Identities=25% Similarity=0.551 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..+||||||||++|+++|++|+++ |++|+|||+.+.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR-GWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 459999999999999999999999 999999999754
No 36
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.04 E-value=1.4e-09 Score=118.70 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=45.3
Q ss_pred hhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHH
Q psy1040 279 KYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLM 341 (614)
Q Consensus 279 ~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl 341 (614)
.+.+.|++|+++++|++|..+ + ++.+|++.+..+|+..+++|+ .||+|+|++ +..|+.
T Consensus 158 ~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 158 MVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 334568999999999999987 3 678898876323777789996 799999987 666654
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.01 E-value=1.1e-09 Score=124.20 Aligned_cols=36 Identities=25% Similarity=0.322 Sum_probs=33.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|++|+++ |++|+|||++..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~ 298 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQ 298 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCc
Confidence 469999999999999999999999 999999999854
No 38
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.00 E-value=2e-10 Score=123.55 Aligned_cols=55 Identities=18% Similarity=0.380 Sum_probs=42.7
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
|...+++.|++|+++++|++|..+ ++++.+|++.+ |+ +++|+ .||+|+|++..|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~---G~--~i~Ad-~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQT---GE--VLETN-HVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETT---CC--EEECS-CEEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECC---CC--EEECC-EEEECCCCCcCCC
Confidence 334445579999999999999987 57888888643 43 58996 6999999987653
No 39
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.98 E-value=2.3e-09 Score=107.95 Aligned_cols=37 Identities=41% Similarity=0.554 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+|||||||||++|+.+|..|++.+|.+|+|||+.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 4689999999999999999999954999999999865
No 40
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.97 E-value=2.1e-10 Score=120.44 Aligned_cols=37 Identities=35% Similarity=0.629 Sum_probs=34.2
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+.+|||||||||++|+++|++|+++ |++|+|||++..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~ 51 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTM 51 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 4579999999999999999999998 999999999853
No 41
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.97 E-value=4.7e-09 Score=109.65 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=33.0
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+|||||||||++|+++|++|+++ |++|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 48999999999999999999999 999999999864
No 42
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.92 E-value=3.8e-09 Score=110.81 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=43.8
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChH
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSP 337 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp 337 (614)
+|...+.+.|++++.++.|+.+..+ ++++++|..... ++..+++|+ .||.|.| .+|.
T Consensus 107 ~L~~~a~~~G~~~~~~~~v~~~~~~--~~~~~~v~~~~~--~~~~~~~a~-~vIgAdG-~~S~ 163 (397)
T 3oz2_A 107 HLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHN--NEIVDVRAK-MVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEET--TEEEEEEEE-EEEECCC-TTCH
T ss_pred HHHHHHHhcCcEEeeeeeeeeeeec--cceeeeeeeccc--ccceEEEEe-EEEeCCc-cccH
Confidence 4444455678999999999999988 689999988776 788889995 5655555 4553
No 43
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.87 E-value=1.1e-08 Score=107.62 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=44.6
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIG 335 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~ 335 (614)
+|...+.+.|++|+.+++|++|..+ +++++||.+.+. +...+++|+ .||.|+|...
T Consensus 107 ~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~--~~~~~~~a~-~vV~A~G~~s 162 (397)
T 3cgv_A 107 HLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHN--NEIVDVRAK-MVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEET--TEEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEEC--CeEEEEEcC-EEEECCCcch
Confidence 3444445579999999999999988 689999998765 556789996 7999999654
No 44
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.87 E-value=4.3e-09 Score=115.08 Aligned_cols=55 Identities=15% Similarity=0.333 Sum_probs=42.3
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
|...+++.|++|+++++|++|..+ ++++++|++.+ |+ +++|+ .||+|+|......
T Consensus 226 L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~---G~--~i~Ad-~VVlA~G~~s~~~ 280 (549)
T 3nlc_A 226 MRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSN---GE--EIKSR-HVVLAVGHSARDT 280 (549)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETT---SC--EEECS-CEEECCCTTCHHH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECC---CC--EEECC-EEEECCCCChhhH
Confidence 334445569999999999999987 67888998754 33 68997 6999999875433
No 45
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.84 E-value=8.8e-09 Score=105.29 Aligned_cols=37 Identities=35% Similarity=0.531 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~ 110 (614)
.+|||||||||++|+++|++|+++ +|++|+|||+++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 369999999999999999999985 6999999999854
No 46
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.84 E-value=3.5e-09 Score=112.79 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=44.9
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLM 341 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl 341 (614)
|...+++.|++|+++++|++|..+ +++++||.+. |+ +++|+ .||+|+++..+.+||.
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~~----g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIE--NGKAAGIIAD----DR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEET----TE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEEC----CE--EEECC-EEEECCCHHHHHHhcC
Confidence 334445678999999999999998 6789999762 32 68897 7999999988877553
No 47
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.84 E-value=1.6e-09 Score=114.99 Aligned_cols=38 Identities=26% Similarity=0.429 Sum_probs=33.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
..+|||||||||++|+++|..|++. |++|+|||+++..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~ 62 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAP 62 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 3569999999999999999999999 9999999998763
No 48
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.83 E-value=1.1e-08 Score=110.69 Aligned_cols=49 Identities=6% Similarity=0.202 Sum_probs=38.3
Q ss_pred hhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCC
Q psy1040 279 KYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIG 335 (614)
Q Consensus 279 ~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~ 335 (614)
.+++.|++|++++.| +|..+ ++++.||.+... +. ++.|+ .||+|+|++.
T Consensus 128 ~~~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~--~g--~~~a~-~VVlAtGg~~ 176 (472)
T 2e5v_A 128 LAREEGIPIIEDRLV-EIRVK--DGKVTGFVTEKR--GL--VEDVD-KLVLATGGYS 176 (472)
T ss_dssp HHHHTTCCEECCCEE-EEEEE--TTEEEEEEETTT--EE--ECCCS-EEEECCCCCG
T ss_pred HHHhCCCEEEECcEE-EEEEe--CCEEEEEEEEeC--CC--eEEee-eEEECCCCCc
Confidence 335679999999999 99887 679999987543 22 36685 7999999875
No 49
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.74 E-value=2e-08 Score=108.10 Aligned_cols=58 Identities=17% Similarity=0.113 Sum_probs=44.6
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
|...+.+.|++|+.+++|++|..+ +++++||++....+|+..+++|+ .||.|.|....
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s~ 163 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSK-VVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECS-EEEECCGGGCT
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcC-EEEECcCCchh
Confidence 334444578999999999999987 67899999876311777789996 79999997543
No 50
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.72 E-value=5.4e-08 Score=106.37 Aligned_cols=57 Identities=18% Similarity=0.289 Sum_probs=45.9
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIG 335 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~ 335 (614)
+|...+.+.|++|+.+++|++|..+ +++++||.+...+ |+..+++|+ .||.|+|...
T Consensus 116 ~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~d-G~~~~i~ad-~VI~AdG~~S 172 (512)
T 3e1t_A 116 MLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTE-GVELMAHAR-FIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSS-SCEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCC-CCEEEEEcC-EEEECCCcch
Confidence 4444445579999999999999987 6899999987653 766789996 7999999754
No 51
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.71 E-value=1.4e-08 Score=111.61 Aligned_cols=35 Identities=31% Similarity=0.422 Sum_probs=32.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+|||||||||+||+.+|..|++. |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecc
Confidence 369999999999999999999999 99999999873
No 52
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.69 E-value=6.1e-08 Score=98.50 Aligned_cols=37 Identities=30% Similarity=0.496 Sum_probs=33.2
Q ss_pred CcccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~ 110 (614)
.+||++|||+|++|+++|..|++. +|++|+|+|+.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 458999999999999999999985 4899999999855
No 53
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.68 E-value=3.8e-08 Score=108.61 Aligned_cols=35 Identities=29% Similarity=0.477 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+|||||||||+||+.+|..|++. |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 469999999999999999999998 99999999873
No 54
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.68 E-value=1.9e-08 Score=106.26 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=33.2
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+|||||||||++|+++|.+|++. |.+|+|||+++.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 58999999999999999999999 999999999865
No 55
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.66 E-value=6.6e-08 Score=102.66 Aligned_cols=36 Identities=33% Similarity=0.499 Sum_probs=33.4
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+|||||||||++|+++|+.|++. |++|+|||+...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 359999999999999999999998 999999999854
No 56
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.60 E-value=1e-07 Score=101.35 Aligned_cols=34 Identities=29% Similarity=0.458 Sum_probs=32.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
||||||||++|+++|++|+++ |++|+||||.+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 899999999999999999999 9999999998764
No 57
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.59 E-value=1.8e-08 Score=106.80 Aligned_cols=37 Identities=38% Similarity=0.551 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~ 110 (614)
.+|||||||||++|+++|+.|+++ ||++|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 459999999999999999999985 5999999999843
No 58
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.56 E-value=1.1e-07 Score=105.62 Aligned_cols=59 Identities=12% Similarity=0.174 Sum_probs=44.1
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEe----CCCCce-------EEEEeccEEEEccCCCCh
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKD----TNTNEI-------KTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~----~~~g~~-------~~v~A~k~VVlaaG~i~s 336 (614)
+|...+++.|++|+.++.|++|+.++ +++++||.+.+ .+ |+. .+++|+ .||+|.|+...
T Consensus 149 ~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~-G~~~~~~~~g~~i~Ad-~VV~AdG~~S~ 218 (584)
T 2gmh_A 149 WMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKD-GAPKTTFERGLELHAK-VTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTT-SCEEEEEECCCEEECS-EEEECCCTTCH
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCC-CCcccccCCceEEECC-EEEEeeCCCch
Confidence 34444455699999999999999874 46899998763 11 432 478996 79999998765
No 59
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.55 E-value=1.2e-07 Score=104.90 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=43.7
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAI 334 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i 334 (614)
+|...+.+.|++|+.+++|++|..+ ++++++|.+.++ |+..+++|+ .||.|+|..
T Consensus 133 ~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~--G~~~~i~Ad-lVV~AdG~~ 187 (591)
T 3i3l_A 133 LLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRG--GESVTVESD-FVIDAGGSG 187 (591)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEET--TEEEEEEES-EEEECCGGG
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecC--CceEEEEcC-EEEECCCCc
Confidence 4444555679999999999999886 567788888765 777789997 799999964
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.52 E-value=1.5e-07 Score=103.75 Aligned_cols=36 Identities=31% Similarity=0.435 Sum_probs=32.9
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
..+|||||||||.||+.+|..|++. |.+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 4569999999999999999999999 99999999874
No 61
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.49 E-value=1e-06 Score=96.76 Aligned_cols=36 Identities=36% Similarity=0.535 Sum_probs=33.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|+.|++. |++|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 469999999999999999999999 999999999865
No 62
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.46 E-value=1e-07 Score=98.38 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=32.0
Q ss_pred ccEEEECCCCchHHHHHHHhc---CCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae---~~G~~VLlLEaG~~ 110 (614)
+||+|||||++|+++|+.|++ . |++|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCC
Confidence 699999999999999999999 7 999999999864
No 63
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.44 E-value=1.5e-07 Score=96.59 Aligned_cols=36 Identities=22% Similarity=0.387 Sum_probs=33.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.+||||||||++|+++|+.|++. |++|+||||.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 37999999999999999999999 9999999998653
No 64
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.42 E-value=1.4e-06 Score=94.65 Aligned_cols=37 Identities=32% Similarity=0.466 Sum_probs=34.6
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+.+|||||||||++|+++|..|+++ |++|+||||.+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 45 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVE 45 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 5679999999999999999999999 999999999855
No 65
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.40 E-value=6.8e-07 Score=86.88 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=31.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+|||||||+|++|+.+|..|++. |.+|+|||++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecC
Confidence 59999999999999999999999 9999999987
No 66
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.39 E-value=3.5e-07 Score=94.34 Aligned_cols=35 Identities=29% Similarity=0.435 Sum_probs=32.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.||++|||||++|+.+|.+|++. |++|+|+|+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 48999999999999999999999 999999999854
No 67
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.38 E-value=1.6e-07 Score=102.13 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=34.1
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
...+||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccc
Confidence 4569999999999999999999998 999999999854
No 68
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.38 E-value=1.7e-06 Score=94.06 Aligned_cols=37 Identities=35% Similarity=0.555 Sum_probs=33.9
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+.++||||||||++|+++|..|+++ |++|+|||+.+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 46 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQ 46 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 4679999999999999999999999 999999999854
No 69
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.36 E-value=9.5e-07 Score=89.70 Aligned_cols=67 Identities=21% Similarity=0.308 Sum_probs=52.0
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
++..+.++.|+++++++.|++|..+ +++.+|++.+..+|+..++.++ .||+|+|...+..+|..+|+
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCe
Confidence 4455556679999999999999865 5688898887333777789998 79999998777677777765
No 70
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.34 E-value=2.1e-07 Score=91.35 Aligned_cols=36 Identities=22% Similarity=0.387 Sum_probs=33.7
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
++||+|||||++|+++|+.|+++ |++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 48999999999999999999999 9999999998664
No 71
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.33 E-value=8.1e-07 Score=90.91 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=47.9
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
+..+.++.|+++++++.|++|..+ ++++++|++.+..+|+..++.++ .||+|+|...++.++
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGD--GKLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIV 276 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEES--SSSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGG
T ss_pred HHHHHhcCCeEEeecceeEEEEcc--cCcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHh
Confidence 334445569999999999999877 57899999987433666789998 799999976555544
No 72
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.33 E-value=1.9e-07 Score=98.20 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=32.6
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+|||||||||++|+++|..|++. |++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 48999999999999999999999 999999999753
No 73
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.32 E-value=9.4e-07 Score=93.10 Aligned_cols=36 Identities=22% Similarity=0.418 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|..|+++ |++|+|||+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 369999999999999999999999 999999999854
No 74
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.30 E-value=8.7e-06 Score=86.22 Aligned_cols=64 Identities=16% Similarity=0.288 Sum_probs=50.8
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVG 346 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig 346 (614)
++....++.|++|++++.|++|..+ ++++++|++.++ + ++.|+ .||+|+|...+..++..+|+.
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG---~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDG---S--VIPAD-IVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSS---C--EEECS-EEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCC---C--EEEcC-EEEECCCCccChHHHHhCCCC
Confidence 4455556789999999999999876 678989987553 3 68898 799999988777787777763
No 75
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.28 E-value=1.2e-06 Score=94.30 Aligned_cols=37 Identities=30% Similarity=0.271 Sum_probs=34.1
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC-----CeEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN-----WKVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G-----~~VLlLEaG~~~ 111 (614)
..|||||||+|++|+++|.+|++. | .+|+|||+.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCC
Confidence 469999999999999999999998 8 999999998753
No 76
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.28 E-value=2.2e-06 Score=94.66 Aligned_cols=36 Identities=39% Similarity=0.502 Sum_probs=31.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+|||||||||++|+++|+.|+++ |++|+|||+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCC
Confidence 469999999999999999999999 999999999865
No 77
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.26 E-value=8.5e-06 Score=82.30 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=47.7
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
++..+.++.|+++++++.|++|..+ ++++.+|++...+ |+..++.++ .||+|+|...++.++
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~~v~~~~~~-g~~~~~~~D-~vv~a~G~~p~~~~~ 249 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGD--KMGVAGVKVKLKD-GSIRDLNVP-GIFTFVGLNVRNEIL 249 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEE--TTEEEEEEEECTT-SCEEEECCS-CEEECSCEEECCGGG
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcC--CCcEEEEEEEcCC-CCeEEeecC-eEEEEEcCCCCchhh
Confidence 3444556789999999999999876 5789999887332 777789998 699999976555443
No 78
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.24 E-value=4.9e-06 Score=91.56 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|..|++. |.+|+||||.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 368999999999999999999998 999999999864
No 79
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.21 E-value=2.1e-06 Score=96.21 Aligned_cols=36 Identities=25% Similarity=0.441 Sum_probs=33.7
Q ss_pred CcccEEEECCCCchHHHHHHHhc-CCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae-~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|..|++ . |++|+||||.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 47999999999999999999999 8 999999999854
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.21 E-value=3.5e-06 Score=85.92 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=32.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+|+||||||++|+.+|..|++. |++|+|+|+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCC
Confidence 58999999999999999999998 999999999854
No 81
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.20 E-value=2.1e-06 Score=92.07 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=33.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCC--eEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~~~ 111 (614)
..+||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCC
Confidence 358999999999999999999998 99 99999998653
No 82
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.11 E-value=6.1e-06 Score=87.13 Aligned_cols=64 Identities=13% Similarity=0.347 Sum_probs=50.6
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVG 346 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig 346 (614)
.+....++.|+++++++.|++|..+ ++++++|++.+ |+ ++.++ .||+|+|...+..++..+|+.
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~d---G~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSD---GN--TLPCD-LVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETT---SC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCC---CC--EEEcC-EEEECcCCccCHHHHHhCCCC
Confidence 3445556789999999999999877 57888898754 33 68898 799999987777787777763
No 83
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.11 E-value=4.9e-06 Score=91.21 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=33.1
Q ss_pred CcccEEEECCCCchHHHHHHHh-cCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLV-ENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~La-e~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+.+|.+|+ +. |.+|+|||+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCC
Confidence 4699999999999999999999 76 999999999854
No 84
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.09 E-value=4.3e-06 Score=91.84 Aligned_cols=37 Identities=35% Similarity=0.520 Sum_probs=33.5
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..++||||||||++|+.+|.+|++. |.+|+|||+++.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 3469999999999999999999998 999999999854
No 85
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.08 E-value=1.7e-06 Score=88.56 Aligned_cols=39 Identities=26% Similarity=0.414 Sum_probs=34.0
Q ss_pred CCcccEEEECCCCchHHHHHHHhc-CCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae-~~G~~VLlLEaG~~~ 111 (614)
..++||+|||||+||+++|++|++ +.|++|+|+|+++..
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 347999999999999999999985 349999999998664
No 86
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.08 E-value=7.3e-06 Score=88.19 Aligned_cols=64 Identities=13% Similarity=0.396 Sum_probs=44.2
Q ss_pred cchhhhcCCCeE--EEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 275 FLRDKYKQDNLK--VQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 275 ~L~~~~~~~n~~--I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
|+...+++.|++ |+.++.|++|..++++++ ..|++.+..+|+..++.++ .||+|+|.+..|++.
T Consensus 106 ~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 106 YIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCC
T ss_pred HHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccC
Confidence 455545555777 899999999998743223 3466655322656688997 699999988777654
No 87
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.07 E-value=1.6e-06 Score=87.76 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||||||||+||+++|.+|++. |++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3569999999999999999999999 99999999874
No 88
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.06 E-value=1.4e-06 Score=94.79 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=36.6
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPT 113 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~ 113 (614)
+.++||||||||++|+++|++|+++.|++|+||||.+..+.
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 45799999999999999999999844999999999988754
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.05 E-value=8.6e-06 Score=89.37 Aligned_cols=36 Identities=42% Similarity=0.493 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+.+|.+|++. |.+|+|||+++.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~ 43 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGED 43 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 469999999999999999999997 999999999865
No 90
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.05 E-value=1.8e-06 Score=87.52 Aligned_cols=34 Identities=29% Similarity=0.532 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.+||+||||||+||+++|.+|++. |++|+|+|++
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~ 38 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERG 38 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecC
Confidence 469999999999999999999999 9999999986
No 91
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.98 E-value=3.8e-06 Score=90.13 Aligned_cols=40 Identities=25% Similarity=0.451 Sum_probs=36.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPT 113 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~ 113 (614)
+.+|||||||||.+|+++|.+|+++ |++|+||||.+..+.
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCc
Confidence 4579999999999999999999999 999999999988753
No 92
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.95 E-value=3.2e-06 Score=85.60 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+.||+||||||+||+++|.+|++. |++|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 359999999999999999999999 99999999874
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.88 E-value=4.1e-05 Score=83.16 Aligned_cols=59 Identities=15% Similarity=0.233 Sum_probs=43.9
Q ss_pred ccchhhhcCCCeEEEcccEEEEEEEcCCCC-----eEEEEEEEeCCCCceEEEEeccEEEEccCC
Q psy1040 274 MFLRDKYKQDNLKVQLNAHVMKLNIDPKTK-----RALSVQFKDTNTNEIKTVKAKKEIILTAGA 333 (614)
Q Consensus 274 ~~L~~~~~~~n~~I~~~~~V~~I~~d~~~~-----ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~ 333 (614)
.||...+++-+..|+.+++|++|..+..++ ...-|++.+..+|+..++.|+ .||+|+|.
T Consensus 149 ~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 149 DYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 466666666667799999999998764322 235577777666888899996 79999994
No 94
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.87 E-value=7.9e-06 Score=84.78 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.9
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..++||||||||++|+++|++|+++ |++|+|||+...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCC
Confidence 4569999999999999999999998 999999999753
No 95
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.85 E-value=6.1e-06 Score=87.71 Aligned_cols=35 Identities=49% Similarity=0.687 Sum_probs=33.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
|||||||||++|+++|++|+++ |++|+||||.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCc
Confidence 8999999999999999999999 9999999997654
No 96
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.82 E-value=9e-06 Score=85.80 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=33.4
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+.|||||||||++|+++|+.|+++ |++|+|||+.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 4579999999999999999999999 999999999865
No 97
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.81 E-value=9.7e-06 Score=86.74 Aligned_cols=40 Identities=28% Similarity=0.505 Sum_probs=36.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPT 113 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~ 113 (614)
+.+|||||||+|.+|+++|.+|+++ |++|+||||++..+.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGG 57 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCC
Confidence 4679999999999999999999999 999999999987753
No 98
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.77 E-value=0.00019 Score=76.16 Aligned_cols=35 Identities=34% Similarity=0.476 Sum_probs=32.4
Q ss_pred ccEEEECCCCchHHHHHHHhc--CCCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVE--NPNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae--~~G~~VLlLEaG~~~ 111 (614)
+|+||||||++|+.+|.+|++ . |++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCC
Confidence 689999999999999999999 6 8999999998754
No 99
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.71 E-value=1.5e-05 Score=83.95 Aligned_cols=40 Identities=33% Similarity=0.540 Sum_probs=35.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
..++|+||||||.+|+++|++|++++|++|+|||+.+..+
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 3469999999999999999999986589999999998764
No 100
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.71 E-value=1.6e-05 Score=82.71 Aligned_cols=37 Identities=38% Similarity=0.588 Sum_probs=34.2
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
+||++|||||++|+++|.+|+++ |++|+|+|+++...
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCC
Confidence 38999999999999999999999 99999999997654
No 101
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.68 E-value=2.1e-05 Score=82.42 Aligned_cols=39 Identities=33% Similarity=0.692 Sum_probs=35.7
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
...+|++|||||++|+++|.+|+++ |.+|+|||+.+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCC
Confidence 4579999999999999999999999 99999999987754
No 102
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.68 E-value=1.5e-05 Score=86.07 Aligned_cols=36 Identities=28% Similarity=0.430 Sum_probs=33.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+||+||||||++|+++|.+|++. |++|+|+|+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCc
Confidence 369999999999999999999998 999999999863
No 103
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.67 E-value=1.4e-05 Score=82.38 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=30.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCC------CeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPN------WKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G------~~VLlLEaG~ 109 (614)
||||||||.+|+++|++|+++ | ++|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 899999999999999999998 7 9999999985
No 104
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.64 E-value=2.3e-05 Score=84.74 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.+||+||||||++|+++|.+|++. |++|+|||++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeCC
Confidence 369999999999999999999999 9999999994
No 105
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.63 E-value=2.9e-05 Score=81.60 Aligned_cols=36 Identities=28% Similarity=0.460 Sum_probs=33.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||||||||++|+++|..|++. |++|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 468999999999999999999999 999999999865
No 106
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.61 E-value=3.3e-05 Score=83.58 Aligned_cols=39 Identities=36% Similarity=0.436 Sum_probs=35.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
...+||+|||||++|+++|++|+++ |++|+|||+.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCC
Confidence 4568999999999999999999998 99999999998764
No 107
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.61 E-value=2.7e-05 Score=83.94 Aligned_cols=39 Identities=31% Similarity=0.446 Sum_probs=34.0
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
...+||||||||++|+++|++|+++ |++|+|||+.+...
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLG 52 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCC
Confidence 4568999999999999999999999 99999999998763
No 108
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.60 E-value=3.2e-05 Score=81.89 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=34.9
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC-CeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN-WKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG~~~~ 112 (614)
..+|+||||||++|+++|++|+++ | .+|+|+|+.+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCC
Confidence 468999999999999999999999 9 8999999987764
No 109
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.60 E-value=3e-05 Score=84.73 Aligned_cols=36 Identities=33% Similarity=0.555 Sum_probs=33.1
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+||+||||||+||.++|.++|+. |+||+|+|+...
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~~ 76 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVKP 76 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecccc
Confidence 369999999999999999999999 999999998653
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.60 E-value=3e-05 Score=80.87 Aligned_cols=35 Identities=37% Similarity=0.515 Sum_probs=33.1
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+||||||||++|+++|..|++. |++|+|||+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 58999999999999999999999 999999999865
No 111
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.58 E-value=4e-05 Score=81.61 Aligned_cols=39 Identities=33% Similarity=0.555 Sum_probs=35.9
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
+.+||+||||+|.+|+++|.+|+++ |++|+|+|+.+...
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYG 42 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCcc
Confidence 4579999999999999999999999 99999999997764
No 112
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.57 E-value=3.4e-05 Score=82.92 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.+||+||||||++|+++|.+|++. |++|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 369999999999999999999999 9999999994
No 113
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.57 E-value=3.2e-05 Score=81.62 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=33.0
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCe-EEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWK-VLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~-VLlLEaG~~ 110 (614)
++||||||||++|+++|..|++. |++ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCC
Confidence 58999999999999999999999 999 999999865
No 114
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.57 E-value=3.4e-05 Score=83.35 Aligned_cols=62 Identities=11% Similarity=0.153 Sum_probs=44.5
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
+...+++.|++|++++.|++|..++ ++++ .|++.+..+++..++.++ .||+|+|......+|
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~-~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQD-DGKL-LVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECT-TSCE-EEEEEETTTCCEEEEEES-EEEECSCEEECCGGG
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcC-CCcE-EEEEecCCCCceeEEEcC-EEEECcccccCcCcC
Confidence 3444567899999999999998753 2333 477776543566789998 799999976555444
No 115
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.57 E-value=2.2e-05 Score=84.24 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=34.1
Q ss_pred cccEEEECCCCchHHHHHHHhcCCC------CeEEEecCCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPN------WKVLLLEAGPDEP 112 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G------~~VLlLEaG~~~~ 112 (614)
.+||||||||++|+++|++|+++ | ++|+|||+.+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCC
Confidence 58999999999999999999998 8 9999999987653
No 116
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.56 E-value=3.4e-05 Score=84.20 Aligned_cols=38 Identities=37% Similarity=0.542 Sum_probs=34.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
..+||||||||++|+++|.+|+++ |++|+|||+.+...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 358999999999999999999999 99999999987763
No 117
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.56 E-value=2.8e-05 Score=84.77 Aligned_cols=38 Identities=29% Similarity=0.435 Sum_probs=35.0
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC-CeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN-WKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG~~~~ 112 (614)
..+||||||||++|+++|.+|+++ | .+|+|||+.+..+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCC
Confidence 358999999999999999999999 9 9999999998764
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.55 E-value=4.1e-05 Score=80.47 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..+||+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 358999999999999999999998 999999999854
No 119
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.55 E-value=3.7e-05 Score=82.73 Aligned_cols=36 Identities=31% Similarity=0.449 Sum_probs=33.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC--eEEEecCCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGPDEP 112 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~~~~ 112 (614)
+||||||||.+|+++|++|+++ |. +|+|||+.+...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCC
Confidence 6999999999999999999999 99 999999987653
No 120
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.54 E-value=3.6e-05 Score=82.25 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=34.9
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
.++||||||||++|+++|.+|+++ |++|+|||+.+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCC
Confidence 358999999999999999999999 99999999987764
No 121
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.53 E-value=3.9e-05 Score=83.16 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=32.4
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+||+||||||+||+++|.+|++. |++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 59999999999999999999999 99999999975
No 122
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.53 E-value=4.1e-05 Score=82.94 Aligned_cols=66 Identities=23% Similarity=0.306 Sum_probs=45.4
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH--HHHhCC
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL--LMLSGV 345 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L--Ll~SGi 345 (614)
+...+++.|++|++++.|++|..+ ++.+ .|.+.+..+|+..++.++ .||+|+|...+..+ |..+|+
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~--~~~~-~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKS--GDGA-KVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEE--TTEE-EEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTC
T ss_pred HHHHHHhCCCEEEECCeEEEEEEe--CCEE-EEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCc
Confidence 344556679999999999999876 3433 466665322555688998 79999997655443 445554
No 123
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.51 E-value=4.2e-05 Score=77.63 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+.+||+||||+|++|+++|.+|++. |++|+|+|+.
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 48 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA 48 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC
Confidence 3469999999999999999999998 9999999984
No 124
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.51 E-value=3.8e-05 Score=83.20 Aligned_cols=38 Identities=34% Similarity=0.534 Sum_probs=34.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
+++||||||||++|+++|.+|+++ |++|+|||+.+..+
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIG 75 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSB
T ss_pred cCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 349999999999999999999999 99999999987653
No 125
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.51 E-value=4.4e-05 Score=76.27 Aligned_cols=34 Identities=32% Similarity=0.596 Sum_probs=32.0
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.||++|||||++|+.+|.+|++. |++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 38999999999999999999999 99999999874
No 126
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.50 E-value=4.7e-05 Score=70.33 Aligned_cols=33 Identities=42% Similarity=0.660 Sum_probs=31.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
||++|||||++|+.+|..|++. |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 8999999999999999999998 99999999985
No 127
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.50 E-value=4.1e-05 Score=82.84 Aligned_cols=61 Identities=11% Similarity=0.207 Sum_probs=42.9
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
+...+++.|++|++++.|++|...+ ++. ..|++.+.++|+..++.++ .||+|+|...+..+
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~-~~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLP-TNQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECT-TSC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGG
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcC-CCc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCc
Confidence 3444567899999999999998742 233 3466666433666678998 79999997655554
No 128
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.49 E-value=5.5e-05 Score=78.58 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC-CCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG-PDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG-~~~ 111 (614)
...+||+|||||++|+++|++|+++ |++|+|||+. +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCcEEEEecccccc
Confidence 3468999999999999999999999 9999999998 654
No 129
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.48 E-value=4.7e-05 Score=81.91 Aligned_cols=36 Identities=36% Similarity=0.524 Sum_probs=33.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~ 39 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCC
Confidence 59999999999999999999999 9999999976654
No 130
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.47 E-value=4.1e-05 Score=81.45 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+||||||||++|+++|..|+++ |++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 48999999999999999999999 99999999975
No 131
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.47 E-value=6.2e-05 Score=81.65 Aligned_cols=38 Identities=26% Similarity=0.335 Sum_probs=34.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
..+||||||||++|+++|++|+++ |++|+|||+.+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCC
Confidence 458999999999999999999999 99999999998764
No 132
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.46 E-value=5.8e-05 Score=78.01 Aligned_cols=37 Identities=27% Similarity=0.386 Sum_probs=34.1
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
..||+||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~ 49 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQL 49 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCC
Confidence 469999999999999999999998 9999999998654
No 133
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.44 E-value=5.8e-05 Score=82.76 Aligned_cols=36 Identities=33% Similarity=0.473 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHHHhc---CCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae---~~G~~VLlLEaG~~ 110 (614)
..+||||||||++|+++|+.|++ . |++|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCCC
Confidence 35899999999999999999999 8 999999999643
No 134
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.43 E-value=6.4e-05 Score=76.71 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=33.4
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..||+||||||++|+.+|.+|++. |++|+|+|+.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~ 39 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPE 39 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 469999999999999999999998 999999999854
No 135
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.42 E-value=6.3e-05 Score=81.16 Aligned_cols=35 Identities=31% Similarity=0.564 Sum_probs=32.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+||+||||||++|+++|.+|++. |++|+|+|+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 469999999999999999999999 99999999874
No 136
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.42 E-value=6e-05 Score=76.65 Aligned_cols=34 Identities=38% Similarity=0.612 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
..||++|||||++|+++|.+|++. |++|+|+|+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 469999999999999999999998 9999999997
No 137
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.41 E-value=7e-05 Score=81.69 Aligned_cols=36 Identities=28% Similarity=0.538 Sum_probs=33.4
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
..+||+||||||+||+++|.+|++. |++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 3579999999999999999999999 99999999964
No 138
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.38 E-value=8e-05 Score=76.69 Aligned_cols=35 Identities=34% Similarity=0.392 Sum_probs=32.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
+||||||+|.||+.+|..|++. |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCc
Confidence 6999999999999999999999 9999999998753
No 139
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.37 E-value=7.6e-05 Score=80.55 Aligned_cols=35 Identities=40% Similarity=0.662 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+||+||||||++|+++|.+|++. |++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 469999999999999999999998 99999999974
No 140
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.37 E-value=7.6e-05 Score=75.26 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
||++|||+|++|+++|..|++. |+ +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC
Confidence 8999999999999999999998 99 99999985
No 141
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.37 E-value=8.3e-05 Score=79.99 Aligned_cols=36 Identities=31% Similarity=0.405 Sum_probs=33.6
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 58999999999999999999999 9999999998654
No 142
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.37 E-value=5.1e-05 Score=82.61 Aligned_cols=34 Identities=38% Similarity=0.530 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHHHHhc---CCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae---~~G~~VLlLEaG~~ 110 (614)
+||||||||++|+++|+.|++ . |++|+|||+...
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCCC
Confidence 799999999999999999999 8 999999999754
No 143
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.36 E-value=8.4e-05 Score=79.51 Aligned_cols=35 Identities=31% Similarity=0.559 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+||+||||||++|+++|.+|++. |++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 369999999999999999999998 99999999973
No 144
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.36 E-value=8e-05 Score=79.79 Aligned_cols=36 Identities=33% Similarity=0.411 Sum_probs=33.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 48999999999999999999999 9999999998653
No 145
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.36 E-value=0.00011 Score=76.82 Aligned_cols=37 Identities=22% Similarity=0.459 Sum_probs=34.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
++|++|||||.+|+++|.+|+++ |++|+|+|+.+...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcC
Confidence 48999999999999999999998 99999999987764
No 146
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.36 E-value=9.9e-05 Score=80.56 Aligned_cols=67 Identities=18% Similarity=0.322 Sum_probs=47.9
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH-HHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ-LLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~-LLl~SGi 345 (614)
.+...+++.|++|++++.|++|..++ +++++++.+...+ |+ .++.++ .||+|+|...+.. +|..+|+
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~-G~-~~i~aD-~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPN-GE-MRIETD-FVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETT-EE-EEEECS-CEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECC-Cc-EEEEcC-EEEECcCCccCCccCHHHcCC
Confidence 34455567799999999999998753 4567555554432 43 478998 6999999876666 6666665
No 147
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.35 E-value=7e-05 Score=80.59 Aligned_cols=36 Identities=33% Similarity=0.437 Sum_probs=33.4
Q ss_pred cccEEEECCCCchHHHHHHHhcCCC--CeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPN--WKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G--~~VLlLEaG~~~ 111 (614)
.+||||||||++|+++|++|+++ | ++|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCC
Confidence 58999999999999999999998 8 999999997664
No 148
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.35 E-value=8.9e-05 Score=74.70 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=30.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
+||++|||||++|+.+|.+|++. |++|+|+|+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeC
Confidence 48999999999999999999998 999999985
No 149
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.35 E-value=8.9e-05 Score=80.46 Aligned_cols=34 Identities=41% Similarity=0.653 Sum_probs=32.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+||+||||||++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 48999999999999999999998 99999999984
No 150
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.35 E-value=8.7e-05 Score=76.77 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=32.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
+||++|||||++|+.+|.+|++. |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 58999999999999999999998 99 999999985
No 151
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.34 E-value=9.2e-05 Score=79.52 Aligned_cols=35 Identities=29% Similarity=0.571 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+||+||||||++|+++|.+|++. |++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 369999999999999999999998 99999999973
No 152
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.33 E-value=0.00011 Score=80.73 Aligned_cols=36 Identities=31% Similarity=0.367 Sum_probs=33.0
Q ss_pred CcccEEEECCCCchHHHHHHHhc---CCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae---~~G~~VLlLEaG~~ 110 (614)
..+||||||||++|+++|..|++ . |.+|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCCC
Confidence 36899999999999999999999 7 999999999754
No 153
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.32 E-value=0.00012 Score=80.33 Aligned_cols=38 Identities=37% Similarity=0.444 Sum_probs=34.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
..++||||||||++|+.+|.+|++. |++|+|||+++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 4479999999999999999999999 9999999998663
No 154
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.32 E-value=8.7e-05 Score=79.83 Aligned_cols=38 Identities=29% Similarity=0.421 Sum_probs=34.7
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
+.+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 4569999999999999999999998 9999999998654
No 155
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.32 E-value=9.6e-05 Score=79.70 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=33.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCc
Confidence 359999999999999999999999 9999999996543
No 156
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.31 E-value=9.8e-05 Score=77.07 Aligned_cols=34 Identities=32% Similarity=0.663 Sum_probs=31.5
Q ss_pred cEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~ 110 (614)
||||||||++|+++|..|+++ ||++|+|+|+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 899999999999999999985 6999999999865
No 157
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.30 E-value=9.3e-05 Score=74.90 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=31.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
..+|++|||+|++|+++|.+|++. |++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC
Confidence 358999999999999999999998 9999999975
No 158
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.29 E-value=0.00012 Score=78.67 Aligned_cols=34 Identities=32% Similarity=0.398 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.+||+||||||++|+++|.+|++. |++|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 358999999999999999999998 9999999998
No 159
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.28 E-value=0.00011 Score=79.39 Aligned_cols=38 Identities=34% Similarity=0.450 Sum_probs=34.2
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
+.+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 3469999999999999999999998 9999999997553
No 160
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.28 E-value=0.0001 Score=78.98 Aligned_cols=33 Identities=39% Similarity=0.484 Sum_probs=31.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+||+||||||++|+++|.+|++. |++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 58999999999999999999999 9999999997
No 161
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.28 E-value=0.00014 Score=78.63 Aligned_cols=38 Identities=26% Similarity=0.230 Sum_probs=34.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC-CeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN-WKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG~~~~ 112 (614)
..+|++|||||++|+++|++|+++ | .+|+|+|+.+...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPG 46 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCC
Confidence 468999999999999999999998 8 7999999998764
No 162
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.28 E-value=0.00011 Score=80.30 Aligned_cols=36 Identities=31% Similarity=0.502 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHHHhc------------CCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVE------------NPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae------------~~G~~VLlLEaG~~ 110 (614)
..+||||||||++|+++|..|++ . |++|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-KLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-SCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-CCeEEEEeCCCC
Confidence 35899999999999999999999 7 999999998643
No 163
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.27 E-value=0.00011 Score=79.01 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=31.8
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+||+||||||++|+++|.+|++. |++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 48999999999999999999999 9999999997
No 164
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.27 E-value=0.00011 Score=79.14 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=34.1
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.+||+||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCc
Confidence 469999999999999999999999 9999999998653
No 165
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.26 E-value=0.00013 Score=76.35 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=31.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.|+|||||++|+++|..|+++ |++|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 599999999999999999999 999999999755
No 166
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.0001 Score=79.00 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
..+||+||||||+||+++|.+|++. |++|+|+|++
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~ 37 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccC
Confidence 3469999999999999999999998 9999999994
No 167
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.25 E-value=9.9e-05 Score=75.22 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=30.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
.+|+||||+|++|+++|..|++. |++|+|+|+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEec
Confidence 58999999999999999999998 999999998
No 168
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.25 E-value=0.00011 Score=79.40 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHHHHhc-CCCCeEEEec
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLE 106 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae-~~G~~VLlLE 106 (614)
+||+||||||++|+++|.+|++ . |++|+|+|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-KKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-CCEEEEEe
Confidence 5999999999999999999999 8 99999999
No 169
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.22 E-value=0.0003 Score=80.05 Aligned_cols=38 Identities=29% Similarity=0.351 Sum_probs=34.8
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
..+||||||||++|+++|..|++. |++|+|||+++...
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~g 372 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIG 372 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccee
Confidence 468999999999999999999999 99999999987653
No 170
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.20 E-value=0.00014 Score=78.81 Aligned_cols=38 Identities=32% Similarity=0.367 Sum_probs=34.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
..+||||||||++|+++|..|++. |.+|+|||+.+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCC
Confidence 358999999999999999999998 99999999987653
No 171
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.20 E-value=0.00015 Score=81.43 Aligned_cols=36 Identities=31% Similarity=0.452 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHHHhc-----CCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVE-----NPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae-----~~G~~VLlLEaG~~ 110 (614)
.++||+|||||++|+++|..|++ . |++|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCC
Confidence 36999999999999999999999 8 999999999754
No 172
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.20 E-value=0.00012 Score=74.95 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
...||++|||+|++|+++|.+|++. |++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 3569999999999999999999998 9999999964
No 173
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.19 E-value=0.00015 Score=77.82 Aligned_cols=34 Identities=41% Similarity=0.585 Sum_probs=32.6
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+||+||||||+||+.+|.+|++. |++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 59999999999999999999998 99999999986
No 174
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.13 E-value=0.00021 Score=76.92 Aligned_cols=38 Identities=34% Similarity=0.420 Sum_probs=33.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPDEP 112 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~~~ 112 (614)
..+|++|||+|++|+++|.+|++. |+ +|+|+|+++...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCC
Confidence 358999999999999999999998 98 899999987653
No 175
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.09 E-value=0.00024 Score=80.23 Aligned_cols=39 Identities=33% Similarity=0.439 Sum_probs=35.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
...+||||||||++|+.+|.+|++. |++|+|+|+++...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~G 427 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDLG 427 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCC
Confidence 4569999999999999999999999 99999999987543
No 176
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.09 E-value=0.00022 Score=79.17 Aligned_cols=35 Identities=26% Similarity=0.474 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
...||+||||||+||+++|.+|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 3469999999999999999999999 9999999984
No 177
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.08 E-value=0.00024 Score=76.00 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=34.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
...+||+|||||+||+++|.+|++. |++|+|+|+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCC
Confidence 3468999999999999999999998 9999999998764
No 178
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.08 E-value=0.00033 Score=77.35 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=37.0
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPT 113 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~~ 113 (614)
+.+|||||||+|..|+++|..||+. |+|||+||+.+..+.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccC
Confidence 4579999999999999999999999 999999999998853
No 179
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.06 E-value=0.00019 Score=77.82 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=31.1
Q ss_pred CcccEEEECCCCchHHHHHHHhc-CCCCeEEEecC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLEA 107 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae-~~G~~VLlLEa 107 (614)
.+||+||||||++|+++|.+|++ . |++|+|+|+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhc-CCeEEEEec
Confidence 46999999999999999999999 8 999999994
No 180
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.03 E-value=0.00087 Score=75.22 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=35.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
...+|++|||||++|+++|.+|++. |++|+|+|+.+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCC
Confidence 4568999999999999999999998 99999999987653
No 181
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.02 E-value=0.00024 Score=77.02 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.2
Q ss_pred cccEEEECCCCchHHHHHHHhcC-C-CCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVEN-P-NWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~-~-G~~VLlLEaG~ 109 (614)
+||+||||||++|+++|.+|++. + |++|+|+|+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999985 3 89999999986
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.00 E-value=0.00031 Score=76.59 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
...||++|||||+||+++|.+|++. |++|+|+|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3479999999999999999999998 999999986
No 183
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.92 E-value=0.0015 Score=74.95 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=35.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
...+||+|||+|++|+++|++|++. |++|+|+|+.+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCC
Confidence 3468999999999999999999998 99999999987754
No 184
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.87 E-value=0.00054 Score=71.06 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
--|+||||||+||+.+|.+|++. | +|+|+|+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCC
Confidence 36999999999999999999998 8 99999998764
No 185
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.86 E-value=0.00044 Score=73.92 Aligned_cols=57 Identities=18% Similarity=0.305 Sum_probs=41.8
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
.+...+++.|++|++++.|++|..+ ++++.+|.. + |+ ++.++ .||+|+|.-.+..+|
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~--~--g~--~i~~D-~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL--D--GK--EIKSD-IAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET--T--SC--EEEES-EEEECCCEEECCGGG
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe--C--CC--EEECC-EEEECcCCCCCHHHH
Confidence 3444556789999999999999864 467766654 2 53 68898 799999976665543
No 186
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.85 E-value=0.00062 Score=71.04 Aligned_cols=62 Identities=13% Similarity=0.243 Sum_probs=44.3
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.+...+++.|+++++++.|++|..+ ++. ..|++.+ |+ ++.++ .||+|+|......++..+|+
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~---g~--~i~~d-~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSD---GE--VIPCD-LVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETT---SC--EEEES-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECC---CC--EEECC-EEEECcCCCcCHHHHHHCCC
Confidence 4445556789999999999999876 333 3454432 43 68897 69999998766667766665
No 187
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.83 E-value=0.00065 Score=72.10 Aligned_cols=64 Identities=14% Similarity=0.263 Sum_probs=46.8
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
+...+++.|++|++++.|++|..+++++++.+|++.+ |+ ++.++ .||+|+|......++..+|+
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~---G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl 260 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED---GT--RLPAD-LVIAGIGLIPNCELASAAGL 260 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT---SC--EEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC---CC--EEEcC-EEEECCCCCcCcchhhccCC
Confidence 4444556799999999999998621146777887643 43 67897 79999997766667777776
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.81 E-value=0.00073 Score=76.04 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=34.7
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
...+|+||||||+||+.+|..|++. |++|+|+|+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 3468999999999999999999998 9999999998764
No 189
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.78 E-value=0.00066 Score=77.07 Aligned_cols=38 Identities=24% Similarity=0.416 Sum_probs=34.8
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
...+||+|||||+||+.+|..|++. |++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 3468999999999999999999999 9999999998764
No 190
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.78 E-value=0.00045 Score=74.69 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=33.2
Q ss_pred cccEEEECCCCchHHHHHHHhcCCC---CeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPN---WKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G---~~VLlLEaG~~~ 111 (614)
++|+||||||++|+.+|.+|++. | .+|+|+|+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCC
Confidence 59999999999999999999997 7 999999998754
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.75 E-value=0.00064 Score=72.60 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=33.2
Q ss_pred ccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDEP 112 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~~ 112 (614)
.|+||||||++|+++|.+|++. +|.+|+|+|+.+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999985 589999999998653
No 192
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.74 E-value=0.00065 Score=79.54 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=46.9
Q ss_pred hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEe--CC--CCceEEEEeccEEEEccCCCChHHHHHHhC
Q psy1040 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKD--TN--TNEIKTVKAKKEIILTAGAIGSPQLLMLSG 344 (614)
Q Consensus 280 ~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~--~~--~g~~~~v~A~k~VVlaaG~i~sp~LLl~SG 344 (614)
+++.|++|++++.|++|.-++ ++++.+|++.+ .. +|+..++.++ .||+|+|...+..++..++
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~-~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADE-NGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECT-TSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HHhCCeEEEeCCEeEEEeccC-CCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 456799999999999998631 35788898876 10 1555789998 7999999776667766554
No 193
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.72 E-value=0.00055 Score=74.02 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=43.5
Q ss_pred hhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 278 DKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 278 ~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
..+++.|++|++++.|++|.-+ +++.+|...+ | .++.++ .||+|+|...+..|+..+|+
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~---~~v~~v~~~~---g--~~i~aD-~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN---EKVERVIDMN---N--HEYKVD-ALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS---SSCCEEEETT---C--CEEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCCcEEEeCCeeEEEecC---CceEEEEeCC---C--eEEEeC-EEEECCCcCcCchHHHhcCC
Confidence 3345678999999999999754 3455666422 3 368897 79999998777778777775
No 194
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.71 E-value=0.0065 Score=60.81 Aligned_cols=55 Identities=18% Similarity=0.422 Sum_probs=43.5
Q ss_pred CCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 283 DNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 283 ~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
.|++|++++.|++|.-+ ++++.+|++.+..+|+..++.++ .||+|+|...++.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEES--SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcC--CCcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHH
Confidence 58999999999999865 56888999887433777789997 799999976555544
No 195
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.69 E-value=0.0007 Score=72.94 Aligned_cols=37 Identities=35% Similarity=0.523 Sum_probs=32.7
Q ss_pred cccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~ 111 (614)
.+|+||||||++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 47999999999999999999984 48999999998764
No 196
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.69 E-value=0.00075 Score=72.51 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=45.8
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.+...+++.|++|++++.|++|..+ +++++ |.+.+ |+ ++.++ .||+|+|...+..|+..+|+
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~-v~~~~---g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGE--NGKVA-RVITD---KR--TLDAD-LVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEES--SSBEE-EEEES---SC--EEECS-EEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEcc--CCeEE-EEEeC---CC--EEEcC-EEEECCCCCcCHHHHHhCCc
Confidence 3445556789999999999999875 45665 55543 43 68898 79999998766667766665
No 197
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.67 E-value=0.0057 Score=61.49 Aligned_cols=57 Identities=14% Similarity=0.316 Sum_probs=43.0
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCC-CceEEEEeccEEEEccCCCChHHHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNT-NEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~-g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
++.|++|++++.|++|..+ ++++.+|++.+..+ |+..++.++ .||+|+|.-..+.++
T Consensus 195 ~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGD--QMGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HTSSEEEECSCEEEEEEEC--SSSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred ccCCeEEEcCceeEEEEcC--CCceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 3568999999999999876 56888999876322 444678998 799999966555443
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.67 E-value=0.00085 Score=70.63 Aligned_cols=58 Identities=16% Similarity=0.290 Sum_probs=43.1
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.+...+++.|++|++++.|++|. + + +|++.+ |+ ++.++ .||+|+|...+..+|..+|+
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~---g~--~i~~D-~vi~a~G~~p~~~l~~~~gl 249 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDD---GT--RIAAD-MVVVGIGVLANDALARAAGL 249 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETT---SC--EEECS-EEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECC---CC--EEEcC-EEEECcCCCccHHHHHhCCC
Confidence 34445567799999999999997 4 3 455532 43 68898 79999998766677777776
No 199
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.66 E-value=0.00092 Score=71.30 Aligned_cols=37 Identities=35% Similarity=0.555 Sum_probs=33.2
Q ss_pred cccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~ 111 (614)
.+|+||||||++|+.+|.+|++. +|.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999985 57899999999864
No 200
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.65 E-value=0.00073 Score=71.09 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=31.6
Q ss_pred cEEEECCCCchHHHHHHHhc---CCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae---~~G~~VLlLEaG~~~ 111 (614)
|+||||||++|+.+|.+|++ . |.+|+|||+.+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCc
Confidence 79999999999999999999 7 9999999998753
No 201
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.63 E-value=0.0086 Score=61.44 Aligned_cols=59 Identities=15% Similarity=0.184 Sum_probs=44.3
Q ss_pred CCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhC
Q psy1040 282 QDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSG 344 (614)
Q Consensus 282 ~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SG 344 (614)
+.|+++++++.|++|..+ ++++.+|++...+ |+..++.++ .||+|+|.-....+|..+|
T Consensus 214 ~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~-g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEES--NGVLTRVHLRSSD-GSKWTVEAD-RLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HTSEEEESSEEEEEEEEE--TTEEEEEEEEETT-CCEEEEECS-EEEECCCBCCSCGGGGGSS
T ss_pred cCceEEEcCcCHHHhccC--CCceEEEEEEecC-CCeEEEeCC-EEEECCCCCCCHHHHHhhc
Confidence 457999999999999876 5788889887322 666789997 7999999655545554444
No 202
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.62 E-value=0.00082 Score=71.66 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=32.3
Q ss_pred ccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~ 111 (614)
+|+||||||++|+.+|.+|++. +|.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4899999999999999999984 58999999998764
No 203
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.59 E-value=0.01 Score=59.35 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=43.9
Q ss_pred CCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHH
Q psy1040 282 QDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLML 342 (614)
Q Consensus 282 ~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~ 342 (614)
+.|+++++++.|++|..+ ++++.+|++....+|+..++.++ .||+|+|...+..+|..
T Consensus 191 ~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~ 248 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGD--ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQ 248 (311)
T ss_dssp CTTEEEETTEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBC
T ss_pred CCCeEEEeCCEEEEEECC--CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhc
Confidence 458999999999999876 46788888875222777789998 79999997655555443
No 204
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.58 E-value=0.005 Score=62.00 Aligned_cols=60 Identities=30% Similarity=0.426 Sum_probs=44.9
Q ss_pred CCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 283 DNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 283 ~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.|+++++++.|++|..+ ++++.+|.+.+..+|+..++.++ .||+|+|...++.+|..+|+
T Consensus 203 ~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGD--GKKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp TTCCEECSEEEEEEEES--SSSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred CCcEEEcCCeEEEEecC--CceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 47889999999999876 56788999875222776789997 79999997666566554443
No 205
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.56 E-value=0.0011 Score=71.66 Aligned_cols=62 Identities=21% Similarity=0.371 Sum_probs=45.5
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.+....++.|++|++++.|++|..+ ++++ .|++.+ |+ ++.++ .||+|+|...+..++..+|+
T Consensus 231 ~~~~~l~~~GV~v~~~~~V~~i~~~--~~~~-~v~l~d---G~--~i~aD-~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 231 WTMEKVRREGVKVMPNAIVQSVGVS--SGKL-LIKLKD---GR--KVETD-HIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHHHHTTTCEEECSCCEEEEEEE--TTEE-EEEETT---SC--EEEES-EEEECCCEEECCTTHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEec--CCeE-EEEECC---CC--EEECC-EEEECCCCCccHHHHHHcCC
Confidence 3444556789999999999999865 3444 555533 43 68898 79999998776667777776
No 206
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.48 E-value=0.0013 Score=69.77 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=32.8
Q ss_pred cccEEEECCCCchHHHHHHHhc---CCCCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae---~~G~~VLlLEaG~~~ 111 (614)
..|+||||||++|+.+|.+|++ . |.+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCC
Confidence 3699999999999999999999 6 9999999998753
No 207
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.44 E-value=0.016 Score=62.97 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~ 248 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEP 248 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCc
Confidence 4689999999999999999998 999999998754
No 208
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.42 E-value=0.0089 Score=63.92 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCCc
Confidence 3699999999999999999998 999999998743
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.41 E-value=0.0014 Score=70.15 Aligned_cols=37 Identities=27% Similarity=0.274 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC--CeEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN--WKVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G--~~VLlLEaG~~~ 111 (614)
..+|++|||+|++|+.+|.+|++. | ++|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcC
Confidence 458999999999999999999997 7 999999998764
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.40 E-value=0.0016 Score=76.72 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~~ 111 (614)
..+||+|||||+||+++|.+|++. |+ +|+|+|+.+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCC
Confidence 368999999999999999999999 99 79999998654
No 211
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.37 E-value=0.0016 Score=71.99 Aligned_cols=40 Identities=30% Similarity=0.371 Sum_probs=34.9
Q ss_pred CCcccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~~ 112 (614)
....||||||||+||+++|.+|++. +|.+|+|+|+.+..+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 3458999999999999999999985 578999999998753
No 212
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.33 E-value=0.018 Score=58.22 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=43.5
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
++.|+++++++.|++|..+.++.++.+|++.+..+|+..++.++ .||+|+|...+..++
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFL 264 (333)
T ss_dssp TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHh
Confidence 35689999999999998762111788898876322666789998 799999976555544
No 213
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.31 E-value=0.0089 Score=63.24 Aligned_cols=34 Identities=35% Similarity=0.557 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCc
Confidence 3699999999999999999998 999999998754
No 214
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.28 E-value=0.0083 Score=64.35 Aligned_cols=56 Identities=20% Similarity=0.340 Sum_probs=37.4
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
++.|++|++++.|++|..++ ++....|++.+..+|...++.++ .||+|+|...+..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~ 290 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRND-DKNVVEIVVEDTKTNKQENLEAE-VLLVAVGRRPYIA 290 (478)
T ss_dssp HHTTCEEECSEEEEEEEEET-TTTEEEEEEEETTTTEEEEEEES-EEEECSCEEECCT
T ss_pred HHCCCEEEeCCEEEEEEEec-CCCeEEEEEEEcCCCCceEEECC-EEEECCCCCcCCC
Confidence 34578999999999998621 12345666653212444678998 7999999765544
No 215
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.27 E-value=0.011 Score=61.49 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-+++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQ 179 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcc
Confidence 4689999999999999999998 999999998754
No 216
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.19 E-value=0.0025 Score=67.07 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=47.1
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.+....++.|++|++++.|++|..+ +++.+|++.+ |+ ++.++ .||+|+|......++..+|+
T Consensus 190 ~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~d---g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 251 (410)
T 3ef6_A 190 WLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASD---GR--SFVAD-SALICVGAEPADQLARQAGL 251 (410)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETT---SC--EEECS-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECC---CC--EEEcC-EEEEeeCCeecHHHHHhCCC
Confidence 3444556679999999999999754 3666777654 33 68898 79999998877778777776
No 217
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.16 E-value=0.0077 Score=63.25 Aligned_cols=34 Identities=35% Similarity=0.523 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~ 177 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDE 177 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCc
Confidence 4699999999999999999998 999999998754
No 218
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.12 E-value=0.028 Score=56.61 Aligned_cols=55 Identities=11% Similarity=0.273 Sum_probs=41.7
Q ss_pred CCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 282 QDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 282 ~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
+.|++|++++.|++|..+ +++.+|++.+..+|+..++.++ .||+|+|...+..+|
T Consensus 200 ~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFV 254 (325)
T ss_dssp CTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred cCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHH
Confidence 458999999999999764 5678898875222776789997 799999965554443
No 219
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.05 E-value=0.0027 Score=69.72 Aligned_cols=37 Identities=19% Similarity=0.351 Sum_probs=32.8
Q ss_pred ccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDEP 112 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~~ 112 (614)
.||+|||||+||+++|.+|++. +|.+|+|+|+.+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 3899999999999999999985 478999999998753
No 220
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.05 E-value=0.019 Score=62.36 Aligned_cols=55 Identities=20% Similarity=0.423 Sum_probs=43.9
Q ss_pred CCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHH
Q psy1040 283 DNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLL 340 (614)
Q Consensus 283 ~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LL 340 (614)
+|++|++++.|++|.-+ ++++++|.+.+..+|+..++.++ .||+|+|...+..+|
T Consensus 404 ~gV~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEEC--SSSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcC--CCcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHH
Confidence 58999999999999865 57899999987433777889998 799999966554444
No 221
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.04 E-value=0.0023 Score=68.36 Aligned_cols=37 Identities=27% Similarity=0.398 Sum_probs=32.8
Q ss_pred cccEEEECCCCchHHHHHHHhc-C-C----CCeEEEecCCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVE-N-P----NWKVLLLEAGPDE 111 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae-~-~----G~~VLlLEaG~~~ 111 (614)
.+|++|||||+||+.+|.+|++ . + |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4899999999999999999988 4 2 7999999998654
No 222
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.00 E-value=0.002 Score=72.00 Aligned_cols=37 Identities=30% Similarity=0.419 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCC--------CeEEEecCCC-CC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPN--------WKVLLLEAGP-DE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G--------~~VLlLEaG~-~~ 111 (614)
...+++|||||++|+++|++|++. | .+|+|+|+.+ ..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 357999999999999999999998 8 9999999987 54
No 223
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.90 E-value=0.028 Score=60.15 Aligned_cols=62 Identities=13% Similarity=0.240 Sum_probs=40.0
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH--HHHhCC
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL--LMLSGV 345 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L--Ll~SGi 345 (614)
++.|++|++++.|++|..+ ++..+.|++.+..++...++.++ .||+|+|...+..+ |..+|+
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~~~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKK--SDGKIDVSIEAASGGKAEVITCD-VLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHTTCEEECSEEEEEEEEC--TTSCEEEEEEETTSCCCEEEEES-EEEECSCEEECCTTSSHHHHTC
T ss_pred HHCCCEEEeCceEEEEEEc--CCceEEEEEEecCCCCceEEEcC-EEEECcCCCcCCCcCCchhcCC
Confidence 3467999999999999876 33323455443111333578898 79999997655554 444554
No 224
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.89 E-value=0.029 Score=59.66 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCc
Confidence 4799999999999999999998 999999998743
No 225
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.86 E-value=0.11 Score=55.13 Aligned_cols=53 Identities=11% Similarity=0.174 Sum_probs=40.3
Q ss_pred hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCCh
Q psy1040 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGS 336 (614)
Q Consensus 280 ~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~s 336 (614)
....+++|++++.|++|..+ ++. ..|.+.+..+|+..++.++ .||+|+|....
T Consensus 326 ~~~~~v~i~~~~~v~~v~~~--~~~-~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 326 SGIPRHAFRCMTTVERATAT--AQG-IELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp HCCCCSEEETTEEEEEEEEE--TTE-EEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred cCCCCeEEEeCCEEEEEEec--CCE-EEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 34578999999999999876 333 4566665434777889998 79999997655
No 226
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.85 E-value=0.0043 Score=65.89 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=29.6
Q ss_pred EEEECCCCchHHHHHHHhcCCC--CeEEEecCCCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPN--WKVLLLEAGPDE 111 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G--~~VLlLEaG~~~ 111 (614)
+||||||+||+++|.+|++. | .+|+|+|+.+..
T Consensus 3 VvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDM 37 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCS
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCC
Confidence 89999999999999999987 6 579999998754
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.82 E-value=0.05 Score=54.84 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=43.4
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
++.|+++++++.|++|.-+ +++.+|++....+|+..++.++ .||+|+|.-....+|..+|+
T Consensus 202 ~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSCC
T ss_pred ccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcce
Confidence 3457999999999999763 5677888875322666789998 79999996655445444443
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.79 E-value=0.024 Score=60.99 Aligned_cols=50 Identities=12% Similarity=0.101 Sum_probs=36.3
Q ss_pred eEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 285 LKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 285 ~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
++|++++.|++|..+ +++++ |++.+.+ |+..++.++ .||+|+|......+
T Consensus 229 V~i~~~~~v~~i~~~--~~~v~-v~~~~~~-G~~~~i~~D-~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 229 FYFDAKARVISTIEK--EDAVE-VIYFDKS-GQKTTESFQ-YVLAATGRKANVDK 278 (492)
T ss_dssp SEEETTCEEEEEEEC--SSSEE-EEEECTT-CCEEEEEES-EEEECSCCEESCSS
T ss_pred cEEEECCEEEEEEEc--CCEEE-EEEEeCC-CceEEEECC-EEEEeeCCccCCCC
Confidence 899999999999876 34443 5554322 666789998 79999997655544
No 229
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.77 E-value=0.0043 Score=64.83 Aligned_cols=61 Identities=13% Similarity=0.050 Sum_probs=41.4
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCCC
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVG 346 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGig 346 (614)
+....++.++++++++.|+.+..+.+.. .|++.+ |+ ++.++ .||++.|.- .+.++..||+-
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~~~~---~v~~~~---g~--~i~~D-~vi~~~g~~-~~~~~~~~gl~ 268 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDTEAM---TVETSF---GE--TFKAA-VINLIPPQR-AGKIAQSASLT 268 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEETTTT---EEEETT---SC--EEECS-EEEECCCEE-ECHHHHHTTCC
T ss_pred HHHHHHhcCcEEEeCceEEEEEecccce---EEEcCC---Cc--EEEee-EEEEecCcC-CchhHhhcccc
Confidence 3344567899999999999998774222 244333 43 68898 688888843 34677888874
No 230
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.76 E-value=0.038 Score=59.38 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=29.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 232 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDT 232 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEecccc
Confidence 589999999999999999998 999999998754
No 231
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.75 E-value=0.0079 Score=64.61 Aligned_cols=33 Identities=33% Similarity=0.490 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 219 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVEL-GKKVRMIERND 219 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGG
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 4799999999999999999998 99999999873
No 232
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.68 E-value=0.039 Score=58.87 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=39.5
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH--HHHhCC
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL--LMLSGV 345 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L--Ll~SGi 345 (614)
++.|++|++++.|++|..+ ++. ..|++...+ |+..++.++ .||+|+|...+..+ |..+|+
T Consensus 227 ~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~~~-g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTNN--GDS-VSLEVEGKN-GKRETVTCE-ALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHTCCEEECSCEEEEEEEC--SSS-EEEEEECC----EEEEEES-EEEECSCEEECCTTSCHHHHTC
T ss_pred hcCCcEEEeCCEEEEEEEc--CCe-EEEEEEcCC-CceEEEECC-EEEECCCcccCCCCCCchhcCC
Confidence 4467899999999999875 333 345554211 555678998 79999997766555 445554
No 233
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.66 E-value=0.032 Score=59.50 Aligned_cols=58 Identities=14% Similarity=0.167 Sum_probs=39.3
Q ss_pred CCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH--HHHhCC
Q psy1040 282 QDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL--LMLSGV 345 (614)
Q Consensus 282 ~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L--Ll~SGi 345 (614)
+.|++|++++.|++|..+ ++++ .|.+..+ |+..++.++ .||+|+|......+ |..+|+
T Consensus 224 ~~gv~i~~~~~v~~i~~~--~~~~-~v~~~~~--g~~~~~~~D-~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 224 KLGVTILTATKVESIADG--GSQV-TVTVTKD--GVAQELKAE-KVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHTCEEECSCEEEEEEEC--SSCE-EEEEESS--SCEEEEEES-EEEECSCEEECCSSSCHHHHTC
T ss_pred HcCCEEEeCcEEEEEEEc--CCeE-EEEEEcC--CceEEEEcC-EEEECCCCCccCCCCCchhcCC
Confidence 357889999999999865 3333 3554423 655678998 79999997655554 444454
No 234
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.62 E-value=0.0084 Score=62.46 Aligned_cols=39 Identities=15% Similarity=0.257 Sum_probs=33.3
Q ss_pred CCcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~~ 112 (614)
.+..-+||||||+||+.+|.+|... +.+|+|+|+.+..+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~~ 45 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKYLP 45 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCCC
Confidence 4457899999999999999999655 99999999997753
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.58 E-value=0.03 Score=58.62 Aligned_cols=34 Identities=32% Similarity=0.489 Sum_probs=31.3
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPR 179 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCc
Confidence 4799999999999999999998 999999998854
No 236
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.55 E-value=0.019 Score=61.67 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=38.6
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH-HHHhCC
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL-LMLSGV 345 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L-Ll~SGi 345 (614)
++.|++|++++.|++|..++ ++++..|++.+ |+ .++.++ .||+|+|...+..| |..+|+
T Consensus 237 ~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~---G~-~~i~~D-~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 237 VKEGINVHKLSKIVKVEKNV-ETDKLKIHMND---SK-SIDDVD-ELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHTCEEECSCCEEEEEECC--CCCEEEEETT---SC-EEEEES-EEEECSCEEECCCSSGGGGTC
T ss_pred HhCCeEEEeCCEEEEEEEcC-CCcEEEEEECC---Cc-EEEEcC-EEEECCCCCCccccChhhcCc
Confidence 34578999999999998653 23344565532 53 478998 79999996544444 444454
No 237
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.24 E-value=0.035 Score=55.77 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=44.1
Q ss_pred CCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 283 DNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 283 ~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
.|+++++++.|++|..+ ++ +.+|.+.+..+|+..++.++ .||+|+|...++.+|..+|+
T Consensus 202 ~gv~~~~~~~v~~i~~~--~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGE--DK-IEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp SSCEEETTEEEEEEECS--SS-CCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSC
T ss_pred CCeEEEeCceeeEEecC--Cc-eEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCc
Confidence 57899999999999765 33 67788877444667789998 79999997765666555554
No 238
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.18 E-value=0.012 Score=63.52 Aligned_cols=36 Identities=8% Similarity=0.251 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+..-+||||||.||+.+|.+|++. +++|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 345799999999999999999988 999999998764
No 239
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.15 E-value=0.065 Score=57.42 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=26.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.++|||+|..|+-+|..|++. |.+|.++|+.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 219 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGL-GYEPTVMVRS 219 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCEEEEEeCC
Confidence 588899999999999999888 8899988864
No 240
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.14 E-value=0.019 Score=61.39 Aligned_cols=55 Identities=13% Similarity=0.266 Sum_probs=36.8
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
++.|++|++++.|++|..+ ++. +.|.+.+..+|+..++.++ .||+|+|...+..+
T Consensus 229 ~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 229 EKQGMKFKLKTKVVGVDTS--GDG-VKLTVEPSAGGEQTIIEAD-VVLVSAGRTPFTSG 283 (470)
T ss_dssp HHSSCCEECSEEEEEEECS--SSS-EEEEEEESSSCCCEEEEES-EEECCCCEEECCTT
T ss_pred HHcCCEEEeCCEEEEEEEc--CCe-EEEEEEecCCCcceEEECC-EEEECCCCCcCCCC
Confidence 3457889999999998765 333 3455543211544578998 79999997655554
No 241
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.14 E-value=0.075 Score=57.00 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=26.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.++|||+|..|+-+|..|++. |.+|.++|+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~ 217 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGI-GLDTTVMMRS 217 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEcC
Confidence 588889999999999888888 8888888875
No 242
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.06 E-value=0.04 Score=58.50 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=30.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHER 183 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred eEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCc
Confidence 689999999999999999998 999999998754
No 243
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.03 E-value=0.082 Score=56.52 Aligned_cols=56 Identities=7% Similarity=0.068 Sum_probs=37.3
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCce--EEEEeccEEEEccCCCChHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEI--KTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~--~~v~A~k~VVlaaG~i~sp~ 338 (614)
++.|++|++++.|++|..++ ++....|.+.+..+|+. .++.++ .||+|+|......
T Consensus 239 ~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~g~~~~~D-~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKKTL-SGLEVSMVTAVPGRLPVMTMIPDVD-CLLWAIGRVPNTK 296 (478)
T ss_dssp HHTTCEEETTEEEEEEEECS-SSEEEEEEECCTTSCCEEEEEEEES-EEEECSCEEESCT
T ss_pred HHCCCEEEeCCEEEEEEEcC-CCcEEEEEEccCCCCcccceEEEcC-EEEEeeccccCCC
Confidence 34678999999999998753 34234466554322333 678998 7999999654443
No 244
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.87 E-value=0.012 Score=62.30 Aligned_cols=61 Identities=21% Similarity=0.344 Sum_probs=43.6
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
++....++.|+++++++.|++|.- + ++.+.+.+ |...++.++ .||+++|.-. +.++..+|.
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~~----~---~~~~~~~~-g~~~~i~~d-~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIEP----D---KVIYEDLN-GNTHEVPAK-FTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECS----S---EEEEECTT-SCEEEEECS-EEEEECEEEC-CHHHHTTCT
T ss_pred HHHHHHHhCCeEEEeCceEEEEeC----C---ceEEEeeC-CCceEeecc-eEEEeccCCC-chHHHhccc
Confidence 455566778999999999999842 2 24455443 677789998 7999998544 466777764
No 245
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.75 E-value=0.18 Score=53.68 Aligned_cols=52 Identities=23% Similarity=0.369 Sum_probs=36.9
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
++.|++|++++.|++|..+ ++.+ .|.+.+.+ | ..++.++ .||+|+|......
T Consensus 232 ~~~Gv~v~~~~~v~~i~~~--~~~~-~v~~~~~~-g-~~~~~~D-~vi~a~G~~p~~~ 283 (476)
T 3lad_A 232 TKQGLKILLGARVTGTEVK--NKQV-TVKFVDAE-G-EKSQAFD-KLIVAVGRRPVTT 283 (476)
T ss_dssp HHTTEEEEETCEEEEEEEC--SSCE-EEEEESSS-E-EEEEEES-EEEECSCEEECCT
T ss_pred HhCCCEEEECCEEEEEEEc--CCEE-EEEEEeCC-C-cEEEECC-EEEEeeCCcccCC
Confidence 3468999999999999876 3443 35665542 3 5678998 7999999654443
No 246
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.71 E-value=0.064 Score=57.48 Aligned_cols=56 Identities=18% Similarity=0.286 Sum_probs=38.4
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH--HHHhCC
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL--LMLSGV 345 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L--Ll~SGi 345 (614)
++.|++|++++.|++|..+ ++++ .|++.+ |+ ++.++ .||+|+|......+ |...|+
T Consensus 243 ~~~Gv~i~~~~~V~~i~~~--~~~v-~v~~~~---g~--~i~aD-~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 243 VAKGISIIYEATVSQVQST--ENCY-NVVLTN---GQ--TICAD-RVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHTCEEESSCCEEEEEEC--SSSE-EEEETT---SC--EEEES-EEEECCCEEECCTTCCHHHHTC
T ss_pred HHCCCEEEeCCEEEEEEee--CCEE-EEEECC---Cc--EEEcC-EEEEeeCCCcCCCCCChhhcCc
Confidence 3457899999999999876 3444 455432 43 68897 79999997655554 444554
No 247
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.68 E-value=0.089 Score=55.77 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLEN 181 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCc
Confidence 589999999999999999998 999999998754
No 248
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.68 E-value=0.11 Score=56.61 Aligned_cols=33 Identities=33% Similarity=0.378 Sum_probs=30.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCc
Confidence 699999999999999999998 999999998754
No 249
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.23 E-value=0.14 Score=56.28 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=30.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 221 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRER-GIEVTLVEMANQ 221 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCc
Confidence 689999999999999999998 999999998743
No 250
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.21 E-value=0.076 Score=56.54 Aligned_cols=51 Identities=10% Similarity=0.210 Sum_probs=34.8
Q ss_pred cCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 281 KQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 281 ~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
++.|++|++++.|++|..++ +.+..|+. ..+ |+ +.++ .||+|+|...+..+
T Consensus 222 ~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~-~~~-g~---i~aD-~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSADA--DGRRVATT-MKH-GE---IVAD-QVMLALGRMPNTNG 272 (463)
T ss_dssp HHTTCEEECSCCEEEEEECT--TSCEEEEE-SSS-CE---EEES-EEEECSCEEESCTT
T ss_pred HHCCCEEECCCEEEEEEEcC--CCEEEEEE-cCC-Ce---EEeC-EEEEeeCcccCCCC
Confidence 44688999999999998763 33334551 221 43 8898 79999997655544
No 251
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.07 E-value=0.085 Score=56.74 Aligned_cols=51 Identities=16% Similarity=0.239 Sum_probs=35.1
Q ss_pred hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 280 ~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
+++.|++|++++.|++|..+ ++++ .|+ ..+ |+ ++.++ .||+|+|...+..+
T Consensus 233 l~~~GV~i~~~~~V~~i~~~--~~~v-~v~--~~~-g~--~i~aD-~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 233 FAERGVRLFKNARAASVTRT--GAGV-LVT--MTD-GR--TVEGS-HALMTIGSVPNTSG 283 (499)
T ss_dssp HHHTTCEEETTCCEEEEEEC--SSSE-EEE--ETT-SC--EEEES-EEEECCCEEECCSS
T ss_pred HHHCCCEEEeCCEEEEEEEe--CCEE-EEE--ECC-Cc--EEEcC-EEEECCCCCcCCCc
Confidence 34568999999999999876 3333 233 221 43 68897 69999997755545
No 252
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.57 E-value=0.12 Score=55.36 Aligned_cols=51 Identities=14% Similarity=0.286 Sum_probs=35.7
Q ss_pred hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 280 ~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
+++.|++|++++.|++|..++ +....|++.+ |+ ++.++ .||+|+|......
T Consensus 241 l~~~GV~i~~~~~v~~i~~~~--~~~~~v~~~~---G~--~i~~D-~vv~a~G~~p~~~ 291 (490)
T 1fec_A 241 LRANGINVRTHENPAKVTKNA--DGTRHVVFES---GA--EADYD-VVMLAIGRVPRSQ 291 (490)
T ss_dssp HHHTTEEEEETCCEEEEEECT--TSCEEEEETT---SC--EEEES-EEEECSCEEESCT
T ss_pred HHhCCCEEEeCCEEEEEEEcC--CCEEEEEECC---Cc--EEEcC-EEEEccCCCcCcc
Confidence 345689999999999998763 2233455432 44 68898 6999999764443
No 253
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.51 E-value=0.12 Score=55.42 Aligned_cols=52 Identities=15% Similarity=0.369 Sum_probs=36.4
Q ss_pred hhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHH
Q psy1040 279 KYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 279 ~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~ 338 (614)
.+++.|++|++++.|++|..+ ++....|++.+ |+ ++.++ .||+|+|......
T Consensus 244 ~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~---G~--~i~~D-~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 244 QLTANGIEIMTNENPAKVSLN--TDGSKHVTFES---GK--TLDVD-VVMMAIGRIPRTN 295 (495)
T ss_dssp HHHHTTCEEEESCCEEEEEEC--TTSCEEEEETT---SC--EEEES-EEEECSCEEECCG
T ss_pred HHHhCCCEEEeCCEEEEEEEc--CCceEEEEECC---Cc--EEEcC-EEEECCCCccccc
Confidence 344568999999999999876 22334555532 44 68898 7999999765544
No 254
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.74 E-value=0.15 Score=54.83 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=33.4
Q ss_pred hcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCc--eEEEEeccEEEEccCCCChHH
Q psy1040 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNE--IKTVKAKKEIILTAGAIGSPQ 338 (614)
Q Consensus 280 ~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~--~~~v~A~k~VVlaaG~i~sp~ 338 (614)
+++.|++|++++.|++|.- ++.+..+...+ |+ ..+|.++ .||.|+|.-.+|.
T Consensus 282 L~~~GV~v~~~~~v~~v~~---~~~~~~~~~~d---g~~~~~~i~ad-~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 282 LENTSIKVHLRTAVAKVEE---KQLLAKTKHED---GKITEETIPYG-TLIWATGNKARPV 335 (502)
T ss_dssp HHHTTCEEETTEEEEEECS---SEEEEEEECTT---SCEEEEEEECS-EEEECCCEECCHH
T ss_pred HHhcceeeecCceEEEEeC---CceEEEEEecC---cccceeeeccC-EEEEccCCcCCHH
Confidence 3456899999999999842 22222222212 33 3579998 7999999766653
No 255
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.68 E-value=0.69 Score=54.32 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
.|+|||+|..|+-+|..|++. |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 799999999999999999998 86 899999864
No 256
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.26 E-value=0.083 Score=55.93 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=32.4
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..+++|||+|.+|+-+|..|++. |.+|+|+|+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDR 183 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCcc
Confidence 46899999999999999999998 999999999864
No 257
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.89 E-value=0.098 Score=45.62 Aligned_cols=33 Identities=18% Similarity=0.429 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
=.++|||.|..|..+|..|.+. |++|+++|+-+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 3699999999999999999998 99999999864
No 258
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.85 E-value=0.099 Score=45.46 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|..|.+. |++|+++|+-
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECC
Confidence 599999999999999999999 9999999975
No 259
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.56 E-value=0.43 Score=53.48 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=29.8
Q ss_pred cEEEEC--CCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVG--GGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVG--sG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++||| +|..|+-+|..|++. |.+|.++|+.+.
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~ 559 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQ 559 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecccc
Confidence 499999 899999999999998 999999997743
No 260
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.41 E-value=0.12 Score=45.82 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-.++|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4699999999999999999998 99999999764
No 261
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.32 E-value=0.13 Score=44.29 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=29.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-.++|||+|..|..+|..|++. |++|.++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 3589999999999999999998 9999999974
No 262
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.12 E-value=0.15 Score=50.81 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=30.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEecccc
Confidence 689999999999999999998 999999999865
No 263
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.58 E-value=0.15 Score=45.01 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|..|.+. |++|+++|+-
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 489999999999999999998 9999999985
No 264
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.55 E-value=0.13 Score=53.35 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=31.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDS-GTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 699999999999999999998 9999999998763
No 265
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.78 E-value=0.16 Score=53.93 Aligned_cols=34 Identities=29% Similarity=0.315 Sum_probs=31.6
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCc
Confidence 3699999999999999999998 999999999865
No 266
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=89.76 E-value=0.19 Score=53.20 Aligned_cols=34 Identities=29% Similarity=0.324 Sum_probs=31.3
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|.+|+-+|..|++. |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCc
Confidence 3699999999999999999998 999999999865
No 267
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=89.56 E-value=0.22 Score=53.01 Aligned_cols=52 Identities=13% Similarity=0.217 Sum_probs=38.6
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCC
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAI 334 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i 334 (614)
|.+.+++.|++|++++.|++|+.+. +++++||++.+ |+ +++|+ .||+++|-+
T Consensus 262 L~r~~~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~~---G~--~i~Ad-~VI~a~~~~ 313 (475)
T 3p1w_A 262 FSRMCAINGGTFMLNKNVVDFVFDD-DNKVCGIKSSD---GE--IAYCD-KVICDPSYV 313 (475)
T ss_dssp HHHHHHHC--CEESSCCEEEEEECT-TSCEEEEEETT---SC--EEEEE-EEEECGGGC
T ss_pred HHHHHHHcCCEEEeCCeEEEEEEec-CCeEEEEEECC---Cc--EEECC-EEEECCCcc
Confidence 3444566799999999999999942 68899998754 33 58896 699999865
No 268
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.45 E-value=0.2 Score=51.52 Aligned_cols=34 Identities=32% Similarity=0.614 Sum_probs=31.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCe
Confidence 3689999999999999999998 999999999865
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=89.43 E-value=0.26 Score=48.92 Aligned_cols=34 Identities=32% Similarity=0.320 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeeccccc
Confidence 3699999999999999999998 999999998754
No 270
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.19 E-value=0.24 Score=41.12 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHHHhcCCC-CeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPN-WKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG 108 (614)
--++|+|+|..|..+|..|.+. | ++|.++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCC
Confidence 3589999999999999999998 8 999999975
No 271
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.20 E-value=0.25 Score=42.64 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.++|+|+|..|..+|..|.+. |.+|.++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 489999999999999999998 9999999875
No 272
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.13 E-value=0.3 Score=51.67 Aligned_cols=33 Identities=27% Similarity=0.263 Sum_probs=31.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 201 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDA 201 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCc
Confidence 699999999999999999998 999999999854
No 273
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.45 E-value=0.31 Score=48.91 Aligned_cols=31 Identities=26% Similarity=0.466 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-|.|||+|..|...|..+|.+ |++|+|+|.-
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECC
Confidence 489999999999999999999 9999999965
No 274
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=86.78 E-value=0.37 Score=49.03 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCC
Confidence 699999999999999999998 999999999865
No 275
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.73 E-value=0.47 Score=47.44 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||+|..|+..|..|+++ |.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 488999999999999999998 99999999864
No 276
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=86.66 E-value=0.41 Score=51.17 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=31.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 196 ~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 196 RVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDT 228 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccc
Confidence 699999999999999999998 999999999865
No 277
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=86.52 E-value=0.42 Score=50.75 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=30.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCc
Confidence 699999999999999999998 999999998854
No 278
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.21 E-value=0.34 Score=45.58 Aligned_cols=31 Identities=13% Similarity=0.443 Sum_probs=29.0
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|||+|..|..+|..|.+. |.+|+++|+-+
T Consensus 3 iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 89999999999999999998 99999999753
No 279
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.06 E-value=0.47 Score=47.64 Aligned_cols=32 Identities=19% Similarity=0.361 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||+|..|+..|.+|+++ |.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 488999999999999999998 99999999864
No 280
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=85.83 E-value=0.51 Score=49.72 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=30.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCe-EEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWK-VLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~-VLlLEaG~~ 110 (614)
.|+|||+|..|+=+|..|++. |.+ |.|+++++.
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGG 247 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCC
T ss_pred EEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCC
Confidence 699999999999999999998 888 999999864
No 281
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.23 E-value=0.57 Score=50.21 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=31.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 210 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRL-GIDSYIFARGNR 210 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSS
T ss_pred eEEEECChHHHHHHHHHHHHc-CCeEEEEecCCc
Confidence 689999999999999999998 999999999865
No 282
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.22 E-value=0.59 Score=49.58 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=30.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.|+|||+|..|+=+|..|++. |.+|.|+++.+.
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~ 231 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTA 231 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred EEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCC
Confidence 599999999999999999998 999999998754
No 283
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=84.99 E-value=0.6 Score=50.72 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.|+|||+|..|+-+|..|++. +.+|.|+++.+.+
T Consensus 187 rV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 187 RVGVIGTGATGVQIIPIAAET-AKELYVFQRTPNW 220 (545)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCCC
T ss_pred eEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCCc
Confidence 699999999999999999998 9999999999864
No 284
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=84.94 E-value=0.65 Score=50.36 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=32.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.|+|||+|..|+-+|..|++. +.+|.|+++.+.+
T Consensus 180 rV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 180 RVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQY 213 (540)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCCC
T ss_pred eEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 699999999999999999998 9999999999774
No 285
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=84.68 E-value=0.59 Score=49.28 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=31.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGER 182 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCc
Confidence 799999999999999999998 999999999865
No 286
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=84.42 E-value=0.48 Score=50.52 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=31.3
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCc
Confidence 3699999999999999999998 999999999865
No 287
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.10 E-value=0.77 Score=46.06 Aligned_cols=54 Identities=20% Similarity=0.313 Sum_probs=38.8
Q ss_pred CCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 282 QDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 282 ~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
+.|+++++++.|++|..+ +++.+|++.+..+|+..++.++ .||+|+|.-.++.+
T Consensus 203 ~~gV~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~ 256 (335)
T 2a87_A 203 NDKIRFLTNHTVVAVDGD---TTVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGL 256 (335)
T ss_dssp CTTEEEECSEEEEEEECS---SSCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTT
T ss_pred cCCcEEEeCceeEEEecC---CcEeEEEEEEcCCCceEEeecC-EEEEccCCccChhH
Confidence 357899999999998754 3566787765222666688998 79999996544444
No 288
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.09 E-value=0.61 Score=46.30 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+++ |++|.++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 388999999999999999998 99999999763
No 289
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.92 E-value=0.73 Score=45.15 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=29.3
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
+.|||+|..|...|..|+++ |++|.++++.+.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~ 34 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQ-GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSSCC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCCEEEEEcCcc
Confidence 78999999999999999998 999999988653
No 290
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=83.84 E-value=0.64 Score=45.70 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+++ |++|.+.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 388999999999999999999 99999998763
No 291
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=83.80 E-value=0.55 Score=49.40 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=31.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDK 181 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeecc
Confidence 699999999999999999998 999999999865
No 292
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.75 E-value=0.78 Score=42.85 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
--+.|||+|..|..+|..|+++ |.+|.++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 3589999999999999999998 999999987643
No 293
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.37 E-value=0.59 Score=49.55 Aligned_cols=33 Identities=24% Similarity=0.512 Sum_probs=30.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-+||+|+|-.|..+|..|++. |++|+|+|+-+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~~ 37 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDGD 37 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 389999999999999999998 999999998643
No 294
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=83.24 E-value=0.77 Score=48.66 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARL-GSKVTVLARNTL 210 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCc
Confidence 689999999999999999998 999999999865
No 295
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.11 E-value=0.66 Score=46.85 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+|..|+..|..|+++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 488999999999999999999 9999999875
No 296
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=82.87 E-value=0.68 Score=48.93 Aligned_cols=50 Identities=14% Similarity=-0.016 Sum_probs=38.1
Q ss_pred hhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCC
Q psy1040 278 DKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAI 334 (614)
Q Consensus 278 ~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i 334 (614)
..+++.|++|++++.|++|..+++++++++|+. . |+ +++|+ .||+|+|.+
T Consensus 250 ~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~--~--g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 250 RLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT--K--LG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE--T--TE--EEECS-CEEECGGGC
T ss_pred HHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE--C--Ce--EEECC-EEEECCCcc
Confidence 344556899999999999998632368888875 2 43 57897 699999976
No 297
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.31 E-value=0.98 Score=44.97 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=32.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
-.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 3599999999999999999998 9999999998764
No 298
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=82.21 E-value=0.66 Score=44.73 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=30.7
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
...|+|||+|..|+.+|..|++. |. ++.|++...-
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCCc
Confidence 35799999999999999999998 97 8999997643
No 299
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=82.14 E-value=0.68 Score=50.29 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=31.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.|+|||+|..|+-+|..|++. +.+|.|+++.+.+
T Consensus 193 rV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 193 RVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSANY 226 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred EEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 599999999999999999998 9999999999864
No 300
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=81.96 E-value=0.55 Score=46.47 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||+|..|+..|..|+++ |.+|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 488999999999999999998 99999999873
No 301
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=81.95 E-value=0.9 Score=47.06 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=31.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRV 177 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcc
Confidence 589999999999999999998 9999999998764
No 302
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=81.94 E-value=1.5 Score=46.47 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~ 111 (614)
.|+||||||++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 6999999999999999999985 58999999999774
No 303
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.69 E-value=0.94 Score=47.10 Aligned_cols=35 Identities=40% Similarity=0.447 Sum_probs=32.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 3689999999999999999998 9999999998764
No 304
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.40 E-value=1 Score=44.89 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||+|..|+..|..|+ + |.+|.++.+.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 4889999999999999999 8 99999999874
No 305
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=81.39 E-value=0.96 Score=47.91 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=31.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCc
Confidence 3699999999999999999998 999999999865
No 306
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.17 E-value=0.92 Score=44.96 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+|..|...|..|+++ |++|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECC
Confidence 488999999999999999998 9999999875
No 307
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.03 E-value=0.9 Score=45.48 Aligned_cols=30 Identities=27% Similarity=0.505 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.+.|||+|..|...|..|+++ |.+|.++ +-
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 589999999999999999999 9999999 53
No 308
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=80.83 E-value=0.96 Score=45.19 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
--+.|||+|..|..+|..|++. |. +|.++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 3589999999999999999998 88 999999864
No 309
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.72 E-value=1 Score=42.53 Aligned_cols=31 Identities=16% Similarity=0.309 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
--++|||+|..|...|..|.+. |.+|.|+..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE-GAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG-CCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEECC
Confidence 4699999999999999999999 999999985
No 310
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.39 E-value=1.5 Score=42.73 Aligned_cols=33 Identities=12% Similarity=-0.037 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.++|||+|..|+-+|..|++. | +|.++++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCC
Confidence 3689999999999999999999 8 9999998754
No 311
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=79.95 E-value=0.97 Score=49.60 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.++|||+|..|+-+|..|++. |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 699999999999999999998 9999999987
No 312
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.73 E-value=0.83 Score=39.67 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|.+. |.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 489999999999999999997 99999998753
No 313
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=79.67 E-value=0.81 Score=44.72 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
--++|||+|-.|...|..|.+. |.+|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 3599999999999999999999 9999999853
No 314
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=79.44 E-value=1.1 Score=47.74 Aligned_cols=34 Identities=21% Similarity=0.435 Sum_probs=30.5
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
..-+.|||+|..|+.+|..|+++ |++|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35689999999999999999999 99999998753
No 315
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=79.43 E-value=1.1 Score=44.95 Aligned_cols=32 Identities=28% Similarity=0.530 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|...|..|+++ |++|.+.++-+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 378999999999999999999 99999998753
No 316
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.20 E-value=0.8 Score=41.56 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.++|||.|..|..+|..|.+..|++|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 599999999999999999873278999999753
No 317
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.91 E-value=1.1 Score=46.69 Aligned_cols=33 Identities=24% Similarity=0.486 Sum_probs=30.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.|||||.|..|..+|..|.+. |.+|++||+-+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~ 38 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPD 38 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 599999999999999999998 999999997644
No 318
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=78.70 E-value=1.3 Score=46.94 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+++ |++|+++++.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 489999999999999999998 99999998753
No 319
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=78.40 E-value=0.64 Score=48.81 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=37.7
Q ss_pred hhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCC
Q psy1040 278 DKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAI 334 (614)
Q Consensus 278 ~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i 334 (614)
..+++.|++|+++++|++|..+ ++++++|.. + |+ +++|+ .||+|+|.+
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~~--~--g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIME--NGKVVGVKS--E--GE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEEE--TTEEEEEEE--T--TE--EEECS-EEEECGGGC
T ss_pred HHHHHcCCEEECCCEEEEEEEe--CCEEEEEEE--C--Ce--EEECC-EEEECCCCC
Confidence 3344568999999999999987 678888873 2 43 68897 699999976
No 320
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.02 E-value=1.5 Score=45.98 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=28.5
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+.|||+|..|+.+|..|+++ |++|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 68999999999999999999 99999998753
No 321
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=77.74 E-value=1.3 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=30.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-+.|||+|..|..+|..|+++ |++|++.++-+.
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 488999999999999999999 999999997643
No 322
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.73 E-value=1.4 Score=44.28 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=30.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++...-
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCEe
Confidence 35799999999999999999998 86 7888887644
No 323
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.65 E-value=1.4 Score=44.72 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+|..|...|..|+++ |.+|.++++.
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 589999999999999999998 9999999875
No 324
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=77.60 E-value=1.6 Score=43.22 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+-|||+|..|..+|..|+ + |++|.+.++.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 45889999999999999999 8 99999999764
No 325
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=77.59 E-value=1.4 Score=44.41 Aligned_cols=33 Identities=39% Similarity=0.496 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+.-+.|||+|..|+..|.+|+++ |.+|.++.+.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 45689999999999999999999 9999999875
No 326
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=77.57 E-value=1.6 Score=40.46 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=27.9
Q ss_pred EEEEC-CCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVG-GGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVG-sG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+.||| +|..|..+|..|+++ |++|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATL-GHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 68999 999999999999998 9999999875
No 327
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.44 E-value=1.5 Score=44.74 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+.|||+|.-|..+|..|+++ |.+|.+..+.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3699999999999999999999 99999998753
No 328
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=77.37 E-value=1.5 Score=42.82 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|.+|..+|..|++. |.+|.+..|.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECC
Confidence 599999999999999999999 9999999765
No 329
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=77.07 E-value=2 Score=45.64 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=31.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
-+.|||+|..|+.+|..|++++|+ +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 589999999999999999997789 9999998765
No 330
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=76.73 E-value=1.2 Score=44.62 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=27.6
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
+.|||+|..|...|..|+++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 68999999999999999998 999999987
No 331
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=76.45 E-value=1.4 Score=43.35 Aligned_cols=35 Identities=26% Similarity=0.183 Sum_probs=32.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
-.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCC
Confidence 3699999999999999999998 9999999998764
No 332
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.24 E-value=1.2 Score=42.21 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-++|+|+|..|..+|..|.+. |. |+++|+-+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 599999999999999999998 99 99999764
No 333
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=76.12 E-value=1.6 Score=46.11 Aligned_cols=32 Identities=31% Similarity=0.329 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|+.+|..|+++ |++|.++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 478999999999999999999 99999999764
No 334
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=76.05 E-value=2.1 Score=41.16 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=30.1
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++...-
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCCc
Confidence 35799999999999999999998 87 7888887643
No 335
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=75.93 E-value=1.5 Score=43.89 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+++ |+ +|.|+++.+
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 489999999999999999998 88 999999864
No 336
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=75.92 E-value=1.7 Score=43.24 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=28.3
Q ss_pred EEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
+.|||+|..|..+|..|+.. |. .|.|++...
T Consensus 3 I~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 78999999999999999998 88 999998753
No 337
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.89 E-value=2 Score=42.16 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=31.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 149 ~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 149 EVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEF 182 (315)
T ss_dssp EEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCC
Confidence 689999999999999999998 9999999998764
No 338
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=75.63 E-value=1.6 Score=47.01 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 599999999999999999998 9999999985
No 339
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=75.46 E-value=2.5 Score=45.13 Aligned_cols=39 Identities=26% Similarity=0.519 Sum_probs=33.7
Q ss_pred CCcccEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCCC
Q psy1040 73 QEEYDFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDE 111 (614)
Q Consensus 73 ~~~yDvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~~ 111 (614)
...+|+||||||+||+.+|..|.+. +|.+|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 4579999999999999999888763 58899999998764
No 340
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.41 E-value=2.5 Score=41.71 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.+.|||.|..|...|..|+++ |++|.+.++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 3689999999999999999999 999999987654
No 341
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=75.26 E-value=0.87 Score=48.15 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=37.3
Q ss_pred hhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHH
Q psy1040 277 RDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQL 339 (614)
Q Consensus 277 ~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~L 339 (614)
...+.+.|++|+++++|++|..+ ++++..|.+ . +. ++.|+ .||+|+++....+|
T Consensus 241 ~~~l~~~g~~i~~~~~V~~i~~~--~~~~~~v~~--~--~~--~~~ad-~vv~a~p~~~~~~l 294 (477)
T 3nks_A 241 ETHLTSRGVSVLRGQPVCGLSLQ--AEGRWKVSL--R--DS--SLEAD-HVISAIPASVLSEL 294 (477)
T ss_dssp HHHHHHTTCEEECSCCCCEEEEC--GGGCEEEEC--S--SC--EEEES-EEEECSCHHHHHHH
T ss_pred HHHHHhcCCEEEeCCEEEEEEEc--CCceEEEEE--C--Ce--EEEcC-EEEECCCHHHHHHh
Confidence 33344568999999999999987 334334543 2 33 58897 69999987655554
No 342
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=75.10 E-value=1.5 Score=44.68 Aligned_cols=31 Identities=26% Similarity=0.302 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+|..|...|..|+++ |++|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 589999999999999999998 9999999875
No 343
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=75.05 E-value=2 Score=43.14 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+.. |. +|.|++.-.
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 599999999999999999998 88 999999864
No 344
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.02 E-value=2.2 Score=42.62 Aligned_cols=32 Identities=13% Similarity=0.322 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-.++|||+|..|+-+|..|++. | +|.++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 3799999999999999999998 7 799999874
No 345
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=74.81 E-value=1.6 Score=43.89 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
--+.|||+|..|..+|..|+.. |+ +|.|++.-.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 3599999999999999999998 88 999999764
No 346
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=74.66 E-value=1.8 Score=44.83 Aligned_cols=29 Identities=24% Similarity=0.415 Sum_probs=26.8
Q ss_pred cEEEECCCCchHHHHHHHhc-CCCCeEEEec
Q psy1040 77 DFVVVGGGVAGPVVAGRLVE-NPNWKVLLLE 106 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae-~~G~~VLlLE 106 (614)
-+.|||+|..|...|..|++ + |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 47899999999999999998 5 99999998
No 347
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=74.44 E-value=2.4 Score=46.69 Aligned_cols=51 Identities=14% Similarity=0.071 Sum_probs=37.6
Q ss_pred chhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccC
Q psy1040 276 LRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAG 332 (614)
Q Consensus 276 L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG 332 (614)
|.+++++.|.+|++++.|++|+++.++++++||...+ |+ +|+|+ .||.++.
T Consensus 384 L~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---Ge--~i~A~-~VVs~~~ 434 (650)
T 1vg0_A 384 FCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---GQ--RIISK-HFIIEDS 434 (650)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---SC--EEECS-EEEEEGG
T ss_pred HHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---CC--EEEcC-EEEEChh
Confidence 4455667899999999999999984338999998322 43 57896 5776554
No 348
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=74.42 E-value=1.9 Score=40.31 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
--+.|||+|..|...|..|++. |++|.++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 3599999999999999999998 9999999875
No 349
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=74.37 E-value=2 Score=41.11 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+.|||+|..|..+|..|+++ |++|.+.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 4688999999999999999999 99999998764
No 350
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=74.31 E-value=2.4 Score=44.68 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=29.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||.|.+|.++|..|.+. |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 589999999999999999998 99999999875
No 351
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=74.09 E-value=1.6 Score=44.76 Aligned_cols=34 Identities=32% Similarity=0.444 Sum_probs=30.4
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
+.-|||+|+|.+|..+|..|... |. +|.++++-+
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 35799999999999999999988 98 999999864
No 352
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=74.04 E-value=2.2 Score=45.03 Aligned_cols=54 Identities=13% Similarity=0.223 Sum_probs=39.7
Q ss_pred CCCeEEEcccEEEEEEEcCCCC-eEEEEEEEeCC------------CCceEEEEeccEEEEccCCCChH
Q psy1040 282 QDNLKVQLNAHVMKLNIDPKTK-RALSVQFKDTN------------TNEIKTVKAKKEIILTAGAIGSP 337 (614)
Q Consensus 282 ~~n~~I~~~~~V~~I~~d~~~~-ra~GV~~~~~~------------~g~~~~v~A~k~VVlaaG~i~sp 337 (614)
+.|+++++++.+++|.-++ ++ ++.+|++.+.. +|+..++.++ .||+|+|.-.++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~-~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSP-DGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECT-TSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCC-CCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 3679999999999987652 25 78888875310 1555689998 799999976555
No 353
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=73.95 E-value=1.6 Score=43.09 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=30.5
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++...-
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 46799999999999999999998 86 7899986643
No 354
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=73.37 E-value=2.5 Score=41.10 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
--++|+|+|.+|..+|..|++. |.+|.|+.|-..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ-GLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 3689999999999999999999 899999988754
No 355
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=73.03 E-value=2.3 Score=41.76 Aligned_cols=30 Identities=27% Similarity=0.455 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|..|++. | +|.+..+.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 489999999999999999999 9 99999765
No 356
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=72.91 E-value=1.7 Score=44.35 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
+--|+|+|+|.+|..+|..|... |. +|.|+++-+
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 35799999999999999999998 87 899999863
No 357
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=72.79 E-value=2.7 Score=41.48 Aligned_cols=32 Identities=16% Similarity=0.307 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||.|..|...|..|++. |++|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 478999999999999999999 99999998753
No 358
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=72.53 E-value=2.1 Score=45.61 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+++ |++|.+.++..
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 388999999999999999999 99999998763
No 359
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=72.48 E-value=2.3 Score=44.45 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=29.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.-|||.|..|+.+|..|+++ |++|+++++-+.
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~ 45 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQ 45 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred ccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHH
Confidence 467999999999999999999 999999987643
No 360
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=72.29 E-value=2 Score=46.47 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.++|||+|..|+-.|..+++- |.+|+|+++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~ 255 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSL-GYDVTVAVRS 255 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEeccc
Confidence 689999999999999999998 9999999975
No 361
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=72.25 E-value=2.3 Score=45.02 Aligned_cols=31 Identities=29% Similarity=0.280 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|.+|+.. |.+|++.|+-
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~ 297 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQA-GARVIVTEID 297 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 489999999999999999999 9999999864
No 362
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=72.24 E-value=2.8 Score=41.86 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+.|||.|..|..+|..|++. |++|.+.++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 3699999999999999999999 99999998753
No 363
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=72.20 E-value=2.6 Score=43.50 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
--|+|||+|.+|..+|..|... |.+|+++++-+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 4699999999999999999888 999999997754
No 364
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=72.12 E-value=2.6 Score=41.65 Aligned_cols=31 Identities=13% Similarity=0.184 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
-++|||+|.+|..+|..|++. |. +|.|..|.
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~ 174 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLST-AAERIDMANRT 174 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECSS
T ss_pred EEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 599999999999999999998 97 89999775
No 365
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.55 E-value=2.5 Score=41.85 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3589999999999999999999 99999998753
No 366
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=71.43 E-value=2.5 Score=41.38 Aligned_cols=33 Identities=27% Similarity=0.525 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-+.|||.|..|...|..|+++ |++|.+.++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 378999999999999999999 999999987643
No 367
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.39 E-value=2.4 Score=44.72 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
-.|+|||+|..|+=+|..|.+. |. +|.++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCc
Confidence 3699999999999999999998 87 5999998865
No 368
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=71.39 E-value=2.8 Score=41.39 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=29.1
Q ss_pred cEEEEC-CCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVG-GGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVG-sG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.||| .|..|..+|..|++. |++|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 489999 999999999999998 99999998653
No 369
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=71.33 E-value=2.5 Score=42.34 Aligned_cols=32 Identities=34% Similarity=0.575 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+.. |. +|.|++.-.
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 489999999999999999998 88 999999754
No 370
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=71.33 E-value=2.5 Score=41.99 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-.+.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999999 99999998764
No 371
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=71.32 E-value=1.8 Score=42.15 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-++|+|+|.+|..+|..|++. |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 599999999999999999999 99999998763
No 372
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=71.23 E-value=2.7 Score=45.48 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++...-
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 35699999999999999999998 87 7899986643
No 373
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=71.22 E-value=2.4 Score=40.76 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=27.3
Q ss_pred EEEECC-C-CchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGG-G-VAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGs-G-~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|+ | ..|..+|.+|+++ |++|+++.+.
T Consensus 25 vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~ 56 (266)
T 3o38_A 25 VLVTAAAGTGIGSTTARRALLE-GADVVISDYH 56 (266)
T ss_dssp EEESSCSSSSHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCCCchHHHHHHHHHHC-CCEEEEecCC
Confidence 889998 7 5999999999999 9999999875
No 374
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=71.00 E-value=2.7 Score=44.11 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
..-+-|||.|.-|+.+|..|+++ |++|+++++-+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 45688999999999999999999 999999998765
No 375
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=70.77 E-value=2.1 Score=42.81 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=28.3
Q ss_pred EEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
+.|||+|..|..+|..|++. |. +|.++++.+
T Consensus 3 I~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 78999999999999999998 88 999998753
No 376
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=70.54 E-value=2.6 Score=43.10 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
--++|+|+|..|..+|..|... |.+|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 3589999999999999999998 9999999875
No 377
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=70.47 E-value=2.6 Score=47.44 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=30.1
Q ss_pred cEEEEC--CCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVG--GGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVG--sG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.|+||| +|..|+-+|..|++. |.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 699998 999999999999998 99999999986
No 378
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=70.40 E-value=2.7 Score=45.67 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=30.5
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++...-
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCCC
Confidence 35799999999999999999998 87 7888887644
No 379
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=70.36 E-value=2.2 Score=44.75 Aligned_cols=34 Identities=12% Similarity=0.251 Sum_probs=30.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
-+.|||.|.+|..+|..|++. |++|.+.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCCc
Confidence 389999999999999999998 9999999987653
No 380
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=70.25 E-value=2.9 Score=40.64 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=29.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-++|.|+|..|..++.+|.++ |++|.++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 389999999999999999999 999999988654
No 381
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=70.12 E-value=2.6 Score=41.30 Aligned_cols=32 Identities=25% Similarity=0.484 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 378999999999999999999 99999998764
No 382
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=69.96 E-value=3.4 Score=40.56 Aligned_cols=31 Identities=13% Similarity=0.377 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+|..|...|..|++. |++|.++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 488999999999999999998 9999999865
No 383
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=69.76 E-value=3.1 Score=38.34 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=28.1
Q ss_pred EEEECC-CCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|.|| |..|..++.+|+++ |++|.++-|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 789995 99999999999999 99999998864
No 384
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=69.73 E-value=2 Score=40.73 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
-+.|||.|..|..+|..|.++ |++|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHT-TCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHC-CCEEEEecC
Confidence 589999999999999999999 999999876
No 385
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=69.59 E-value=2.9 Score=40.59 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=27.8
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
+.|||+|..|...|..|++. |++|.++++.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 32 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRR-GHYLIGVSRQ 32 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEcCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 68999999999999999998 9999999865
No 386
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=69.52 E-value=2.8 Score=42.69 Aligned_cols=32 Identities=28% Similarity=0.400 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
--++|+|+|.+|..+|..|... |.+|.++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3699999999999999999988 9999999875
No 387
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=69.46 E-value=2.8 Score=41.03 Aligned_cols=31 Identities=26% Similarity=0.221 Sum_probs=28.3
Q ss_pred cEEEEC-CCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVG-GGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVG-sG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+| +|.+|..+|..|++. |.+|.++.+.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 589999 899999999999999 9999998774
No 388
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=69.42 E-value=2 Score=43.96 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=29.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCC-------CeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPN-------WKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G-------~~VLlLEaG~~ 110 (614)
-+.|||+|..|...|..|+++ | .+|.++.+.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 489999999999999999998 8 89999987644
No 389
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=69.29 E-value=3.4 Score=41.11 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=28.7
Q ss_pred EEEECCCCchHHHHHHHhcC-CCCeEEEecCCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPD 110 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~ 110 (614)
+.|||+|..|..+|..|++. .|.+|.++++.+.
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 78999999999999999985 2789999998643
No 390
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=69.27 E-value=3.7 Score=40.21 Aligned_cols=31 Identities=19% Similarity=0.404 Sum_probs=28.3
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+.|||.|..|...|..|++. |++|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999999999999999998 99999998753
No 391
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=69.23 E-value=3 Score=41.64 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
-+.|||+|..|..+|..|+.. |. .|.|++.-
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 489999999999999999998 99 99999975
No 392
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=69.17 E-value=3.2 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCC-CeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPN-WKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG~ 109 (614)
-+.|||.|..|..+|..|+++ | ++|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 489999999999999999999 9 9999998764
No 393
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=68.93 E-value=2.5 Score=42.05 Aligned_cols=31 Identities=23% Similarity=0.378 Sum_probs=28.2
Q ss_pred EEEECCCCchHHHHHHHhcCCC--CeEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPN--WKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G--~~VLlLEaG~ 109 (614)
+.|||+|..|..+|..|+++ | .+|.++++..
T Consensus 4 I~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 4 IGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 78999999999999999998 8 6899999753
No 394
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=68.91 E-value=3 Score=41.55 Aligned_cols=31 Identities=10% Similarity=0.234 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
-++|+|+|.+|..+|..|++. |. +|.|+-|-
T Consensus 156 ~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 156 KMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred EEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 589999999999999999998 98 89999876
No 395
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=68.90 E-value=3.7 Score=40.21 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
--++|+|+|.+|..+|..|++. |. +|.|+-|-.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 3689999999999999999998 97 899987653
No 396
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=68.75 E-value=3.2 Score=38.51 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=27.9
Q ss_pred EEEECC-CCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGG-GVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|+ |..|..+|.+|.++ |++|.++-|.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEec
Confidence 789998 99999999999999 9999999875
No 397
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=68.75 E-value=2.5 Score=42.94 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=30.3
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcC
Confidence 45799999999999999999998 86 7899986543
No 398
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=68.74 E-value=3.2 Score=40.75 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=28.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
--++|+|+|.+|..+|..|++. |. +|.|+.|-
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 3589999999999999999998 98 69998765
No 399
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=68.64 E-value=3.1 Score=40.29 Aligned_cols=32 Identities=19% Similarity=0.500 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-++|.|+|..|..++.+|.++ |++|.++-+.+
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 489999999999999999999 99999998764
No 400
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=68.63 E-value=1.7 Score=40.73 Aligned_cols=33 Identities=21% Similarity=0.548 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEE-ecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLL-LEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLl-LEaG~ 109 (614)
--+.|||+|..|..+|..|+++ |++|.+ .++.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 3589999999999999999998 999998 77653
No 401
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=68.26 E-value=3 Score=46.75 Aligned_cols=32 Identities=31% Similarity=0.620 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+++ |++|++.++.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 489999999999999999999 99999998764
No 402
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=68.06 E-value=3.1 Score=41.34 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3599999999999999999998 99999998753
No 403
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=68.01 E-value=3.2 Score=43.00 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=29.3
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--|+|||+|.+|..+|..|... |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3699999999999999999887 99999998754
No 404
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=67.91 E-value=2.6 Score=43.13 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--++|||+|..|..+|..|... |.+|+++++-+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999888 99999999764
No 405
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=67.80 E-value=2 Score=43.44 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=29.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCC-------CeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPN-------WKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G-------~~VLlLEaG~~ 110 (614)
-+.|||+|..|...|..|+++ | .+|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 589999999999999999998 8 89999987644
No 406
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=67.75 E-value=2.7 Score=40.35 Aligned_cols=30 Identities=30% Similarity=0.647 Sum_probs=27.7
Q ss_pred EEEECCCCchHHHHHHHhcCCC-CeEEEecCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPN-WKVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G-~~VLlLEaG 108 (614)
+.|||+|..|...|..|+++ | .+|.+.++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~ 33 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRG 33 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHH-CSCEEEEECSS
T ss_pred EEEECchHHHHHHHHHHHHC-CCCeEEEECCC
Confidence 67999999999999999998 9 899999875
No 407
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=67.38 E-value=3.1 Score=40.66 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
-++|+|+|.+|..+|..|++. |. +|.|..|-.
T Consensus 119 ~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 119 YILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 589999999999999999998 98 899987764
No 408
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=67.22 E-value=4.2 Score=39.88 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+|..|...|..|++. |++|.+.++.
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 36 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKE-GVTVYAFDLM 36 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 588999999999999999998 9999998865
No 409
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=67.22 E-value=2.6 Score=44.10 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=30.6
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
....+.|||.|..|+.+|..||+. |++|+.++--
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did 53 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVN 53 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-CCcEEEEECC
Confidence 346799999999999999999999 9999999854
No 410
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=67.19 E-value=3.5 Score=37.47 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=28.4
Q ss_pred EEEECC-CCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|+|+ |..|..+|.+|.++ |++|.++.+.+
T Consensus 6 ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 789998 99999999999998 99999998764
No 411
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=67.01 E-value=3.5 Score=44.78 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=31.5
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.+||||.|-.|..+|..|.+. |.+|+++|+-+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 4699999999999999999998 999999998765
No 412
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=66.84 E-value=3.6 Score=38.63 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=29.4
Q ss_pred cEEEECC-CCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-++|.|+ |..|..+|.+|+++ |++|.++.|.+.
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~ 56 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEE 56 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGG
T ss_pred eEEEECCCChHHHHHHHHHHhC-CCeEEEEECChH
Confidence 4899998 99999999999998 999999988643
No 413
>3o6u_A Uncharacterized protein CPE2226; structural genomics, protein structure initiative, NESG, CPR biology; 2.50A {Clostridium perfringens}
Probab=66.80 E-value=2.1 Score=36.59 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=28.7
Q ss_pred ccCCCCCCCCCCCchhhHHhhhcCcchHHHHHHHHHHHHhhc
Q psy1040 11 SVMDQPTCSCDYQDTAYIARSCGSSLNVTLFMTLVDVMLRTQ 52 (614)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (614)
.+++.|+.++|.|+|||+++.. |+.+++.+|...
T Consensus 76 ~ive~Qs~~VD~VSGAT~sS~~--------~~~av~~Al~~A 109 (128)
T 3o6u_A 76 ALIEKQSSDIDVITGATSSSNQ--------FKKLAEKVLKNA 109 (128)
T ss_dssp HHHHHSSSCCCCBTTBHHHHHH--------HHHHHHHHHHHH
T ss_pred HHHhhCCCCCceecCccHhHHH--------HHHHHHHHHHHH
Confidence 3678899999999999999988 778888887754
No 414
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=66.58 E-value=3.6 Score=40.00 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=27.5
Q ss_pred EEEECCCCchHHHHHHHhcCCCC--eEEEecCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNW--KVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG 108 (614)
+.|||+|..|..+|..|++. |+ +|.+.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence 78999999999999999998 88 89998865
No 415
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=66.48 E-value=3.6 Score=46.09 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+-|||+|..|.-+|..++.+ |++|+|+|..+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 588999999999999999999 99999999654
No 416
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=66.41 E-value=3.7 Score=40.82 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|+.. |. +|.|+|.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 388999999999999999998 86 899998753
No 417
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=66.17 E-value=6.5 Score=34.98 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=38.7
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCCChHHHHHHhCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGV 345 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i~sp~LLl~SGi 345 (614)
++...+++.|++++++ +|++|..++ +. ..|+ ..+ | ++.++ .||+|+|.. |.++...|+
T Consensus 61 ~l~~~~~~~gv~v~~~-~v~~i~~~~--~~-~~v~--~~~-g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 61 RLEAHARRYGAEVRPG-VVKGVRDMG--GV-FEVE--TEE-G---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHHTTCEEEEC-CCCEEEECS--SS-EEEE--CSS-C---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHHcCCEEEeC-EEEEEEEcC--CE-EEEE--ECC-C---EEEEC-EEEECCCCC--CCccccCCC
Confidence 4444555678999999 999998763 32 2233 231 4 68896 799999976 455555554
No 418
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=66.17 E-value=4.2 Score=39.78 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
--++|+|+|.+|..+|..|++. |. +|.|..|-.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ-QPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhc-CCCeEEEEECCH
Confidence 3589999999999999999998 95 899997753
No 419
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=66.12 E-value=3.6 Score=42.16 Aligned_cols=32 Identities=31% Similarity=0.311 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
--++|||+|..|..+|..|... |.+|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM-GATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3599999999999999999988 9999999865
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=66.11 E-value=3.7 Score=40.15 Aligned_cols=31 Identities=13% Similarity=0.389 Sum_probs=28.7
Q ss_pred cEEEECC-CCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGG-GVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||+ |..|..+|..|++. |++|.+.++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 5899999 99999999999998 9999999875
No 421
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=66.10 E-value=3.1 Score=40.59 Aligned_cols=32 Identities=31% Similarity=0.373 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-++|||+|..|..+|..|.+. |.+|.+..+..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 589999999999999999998 88999998763
No 422
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=65.97 E-value=3.7 Score=39.51 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
-++|||+|.+|..+|..|.+. |. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 699999999999999999998 87 899998753
No 423
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=65.88 E-value=4.1 Score=41.85 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-.|+|+|+|.+|..+|..|... |.+|++.++-+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAA 206 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 4699999999999999998887 999999997643
No 424
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=65.85 E-value=4 Score=39.77 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=28.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
--++|+|+|.+|..+|..|++. |. +|.|.-|-
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA-GPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 3589999999999999999998 95 89998775
No 425
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=65.50 E-value=3.9 Score=42.74 Aligned_cols=34 Identities=15% Similarity=0.341 Sum_probs=29.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCE
Confidence 46799999999999999999998 87 788998653
No 426
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=65.50 E-value=3.8 Score=40.77 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
-+.|||.|..|..+|..|.+. |+ +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 589999999999999999998 99 999998753
No 427
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=65.45 E-value=3 Score=48.47 Aligned_cols=34 Identities=12% Similarity=0.060 Sum_probs=31.4
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAAT-GGVVAVIDARSSI 319 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCcc
Confidence 589999999999999999998 9999999998764
No 428
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=65.32 E-value=3.9 Score=41.62 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|.+|.+. |.+|++.+.-
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 489999999999999999999 9999998753
No 429
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=65.14 E-value=4.1 Score=43.27 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=30.6
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+-++.|||.|..|..+|..|+++ |++|.+..+.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 35799999999999999999998 99999998753
No 430
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=64.94 E-value=3.7 Score=39.46 Aligned_cols=29 Identities=21% Similarity=0.189 Sum_probs=26.5
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
+.|||.|..|...|..|++. |++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 67999999999999999998 999998755
No 431
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=64.85 E-value=4.5 Score=37.40 Aligned_cols=31 Identities=16% Similarity=0.295 Sum_probs=28.2
Q ss_pred EEEEC-CCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVG-GGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVG-sG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|.| +|..|..++.+|+++ |++|.++.|.+
T Consensus 3 ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTS-SCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCc
Confidence 68898 799999999999999 99999998864
No 432
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=64.73 E-value=4.1 Score=40.04 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||.|..|..+|.+|... |.+|++.++..
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999988 99999998753
No 433
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=64.73 E-value=5.9 Score=38.30 Aligned_cols=31 Identities=10% Similarity=-0.037 Sum_probs=27.7
Q ss_pred EEEECC---CCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGG---GVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGs---G~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 789997 68899999999999 99999998764
No 434
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=64.63 E-value=4.6 Score=38.12 Aligned_cols=31 Identities=16% Similarity=0.323 Sum_probs=27.5
Q ss_pred EEEECC-CCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|.|+ |..|..+|.+|+++ |++|.++.+..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 678887 88999999999998 99999998764
No 435
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=64.36 E-value=3.5 Score=44.46 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=31.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPHF 221 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred EEEEECCCccHHHHHHHHhhc-CceEEEEEcCCcc
Confidence 589999999999999999998 9999999998654
No 436
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=64.28 E-value=4 Score=40.37 Aligned_cols=33 Identities=27% Similarity=0.549 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4689999999999999999999 99999998753
No 437
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=64.24 E-value=5.8 Score=42.24 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=38.1
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAI 334 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i 334 (614)
+|...+.+.|++++.+ +|++|..++ ++++++|++.+ |+ +++|+ .||.|+|..
T Consensus 178 ~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~~---g~--~~~ad-~vV~A~G~~ 229 (511)
T 2weu_A 178 YLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTKQ---HG--EISGD-LFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEESS---SC--EEECS-EEEECCGGG
T ss_pred HHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEECC---CC--EEEcC-EEEECCCcc
Confidence 3444444578999999 999998854 46777887643 43 68996 799999964
No 438
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=64.16 E-value=4.3 Score=40.38 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
--++|+|+|.+|..+|..|++. |. +|.|+-|-
T Consensus 149 k~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 3589999999999999999998 97 79998876
No 439
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=63.92 E-value=5.1 Score=42.31 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|..|++.+|.+|.++.|.
T Consensus 25 ~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 25 NVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred EEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 58999999999999999999767899999875
No 440
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=63.68 E-value=4.4 Score=39.96 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+.|||.|..|..+|.+|... |.+|++.++-.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL-GANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 3599999999999999999988 99999998753
No 441
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=63.62 E-value=4.6 Score=37.42 Aligned_cols=30 Identities=13% Similarity=0.327 Sum_probs=27.1
Q ss_pred EEEEC-CCCchHHHHHHHh-cCCCCeEEEecCC
Q psy1040 78 FVVVG-GGVAGPVVAGRLV-ENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVG-sG~aG~~~A~~La-e~~G~~VLlLEaG 108 (614)
++|.| +|..|..+|.+|+ +. |++|.++.+.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQ 39 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESS
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecC
Confidence 88999 4999999999999 77 9999999875
No 442
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=63.55 E-value=3.6 Score=40.93 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=29.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
--+.|||.|..|..+|..|+++ |+ +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 3589999999999999999999 99 99999875
No 443
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=63.54 E-value=5.2 Score=38.88 Aligned_cols=31 Identities=16% Similarity=0.321 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG 108 (614)
-++|||+|.+|..+|..|++. |. +|.|.-|-
T Consensus 121 ~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHT-TCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 599999999999999999998 86 79999775
No 444
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=63.52 E-value=4.1 Score=43.20 Aligned_cols=31 Identities=35% Similarity=0.477 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
.+.|||+|..|...|..|+++ |++|.+.++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 488999999999999999998 9999999875
No 445
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=63.43 E-value=6.4 Score=39.33 Aligned_cols=33 Identities=18% Similarity=0.031 Sum_probs=28.6
Q ss_pred cEEEECCCCchHH-HHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPV-VAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~-~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-+.|||.|.+|.+ +|..|.+. |++|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCC
Confidence 4789999999996 77778888 999999998754
No 446
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=63.29 E-value=4.8 Score=39.32 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEec
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLE 106 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLE 106 (614)
-+.|||+|..|...|..|++. |++|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 478999999999999999998 99999987
No 447
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=63.15 E-value=4.7 Score=41.67 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=27.1
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+.|||.|..|+.+|..|++ |++|.++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 6799999999999999997 89999998753
No 448
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=63.11 E-value=5.7 Score=41.72 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|..|..+|..|++. |.+|.++.+.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDS-GIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEECC
Confidence 388999999999999999997 9999999875
No 449
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=62.68 E-value=4 Score=39.15 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCC----CeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPN----WKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G----~~VLlLEaG~~ 110 (614)
-+.|||+|..|...|..|+++ | .+|.+.++.+.
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 488999999999999999998 8 68999987643
No 450
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=62.50 E-value=3.7 Score=41.56 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=29.9
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCC-eEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~ 109 (614)
..-|+|||+|..|+.+|..|+.. |. ++.|++-..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 35799999999999999999998 97 799998553
No 451
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=62.39 E-value=5.6 Score=41.87 Aligned_cols=51 Identities=12% Similarity=0.259 Sum_probs=37.2
Q ss_pred CCeEEEcccEEEEEEEcCCCCeEEEEEEEeC-------------CCCceEEEEeccEEEEccCCCChH
Q psy1040 283 DNLKVQLNAHVMKLNIDPKTKRALSVQFKDT-------------NTNEIKTVKAKKEIILTAGAIGSP 337 (614)
Q Consensus 283 ~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~-------------~~g~~~~v~A~k~VVlaaG~i~sp 337 (614)
.|++|++++.+++|.-+ +++.+|++.+. .+|+..++.++ .||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 57999999999998743 46677776531 01555689998 799999976665
No 452
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=62.38 E-value=4.7 Score=38.85 Aligned_cols=32 Identities=34% Similarity=0.412 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|..|.+. |.+|.+..+-.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 699999999999999999998 88999998753
No 453
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=62.23 E-value=5.5 Score=39.86 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
-+.|||+|..|.++|..|+.. |. .|.|++.-+.
T Consensus 9 kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAEG 42 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCch
Confidence 589999999999999999998 88 9999997643
No 454
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.04 E-value=4.9 Score=40.85 Aligned_cols=32 Identities=16% Similarity=0.299 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-.+.|||.|..|..+|..|+++ |++|.+.++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 4699999999999999999999 9999999875
No 455
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=61.73 E-value=5 Score=42.58 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
.+.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 589999999999999999998 99999998754
No 456
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=61.67 E-value=7 Score=38.89 Aligned_cols=32 Identities=16% Similarity=0.283 Sum_probs=28.6
Q ss_pred ccEEEECCC-CchHHHHHHHhcCCCCeEEEecCC
Q psy1040 76 YDFVVVGGG-VAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG-~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-.++|||+| ..|..+|..|... |.+|.++.+-
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 579999999 5799999999998 9999999765
No 457
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=61.64 E-value=6 Score=38.81 Aligned_cols=30 Identities=17% Similarity=0.046 Sum_probs=26.8
Q ss_pred EEEECCC---CchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGGG---VAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG---~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|++ ..|..+|.+|+++ |++|+++.+.
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~ 65 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLS 65 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCC
Confidence 7888986 7899999999999 9999999875
No 458
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=61.64 E-value=3.6 Score=46.03 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+-|||+|..|..+|..|+++ |++|++.++.+
T Consensus 316 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASK-GTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhC-CCEEEEEECCH
Confidence 489999999999999999999 99999998763
No 459
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=61.62 E-value=6.8 Score=38.01 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=27.1
Q ss_pred EEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+.|||+|..|...|..|++ |++|.+.++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLAR--RFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHT--TSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhC--CCeEEEEeCCH
Confidence 7899999999999999997 89999998753
No 460
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=61.57 E-value=5.2 Score=43.18 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=37.6
Q ss_pred cchhhhcCC-CeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCCC
Q psy1040 275 FLRDKYKQD-NLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAI 334 (614)
Q Consensus 275 ~L~~~~~~~-n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~i 334 (614)
+|...+++. |++|+.+ +|++|..++ ++++++|++.+ |+ +++|+ .||+|+|..
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~~---G~--~i~ad-~vI~A~G~~ 251 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTAT---GR--VFDAD-LFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEETT---SC--EEECS-EEEECCGGG
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEECC---CC--EEECC-EEEECCCCc
Confidence 344444444 8999999 999998864 46777887643 42 68897 799999964
No 461
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=61.09 E-value=4.3 Score=40.04 Aligned_cols=31 Identities=23% Similarity=0.227 Sum_probs=27.9
Q ss_pred EEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
+.|||+|..|.++|..|+.. |. .|.|++.-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 68999999999999999998 87 899998754
No 462
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=61.07 E-value=3.2 Score=41.06 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHHHHhcCC----C-CeEEEecC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENP----N-WKVLLLEA 107 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~----G-~~VLlLEa 107 (614)
.+.|||+|..|...|..|++++ | .+|.++.+
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999852 7 89999987
No 463
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=61.05 E-value=4.9 Score=42.33 Aligned_cols=31 Identities=26% Similarity=0.327 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|||+|..|...|..|.+. |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 489999999999999999999 9999999864
No 464
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=61.03 E-value=4.3 Score=42.35 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=27.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC---eEEEec
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW---KVLLLE 106 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~---~VLlLE 106 (614)
-++|+|+|.+|..+|..|.+. |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 599999999999999999998 97 799998
No 465
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=60.77 E-value=6 Score=38.06 Aligned_cols=31 Identities=16% Similarity=0.060 Sum_probs=27.3
Q ss_pred EEEECC---CCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGG---GVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGs---G~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHC-CCEEEEEecCh
Confidence 889994 88899999999999 99999998753
No 466
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=60.72 E-value=5 Score=37.23 Aligned_cols=33 Identities=18% Similarity=0.489 Sum_probs=29.1
Q ss_pred cEEEECC-CCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-++|.|| |..|..++.+|.++ |++|.++.|.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 39 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPE 39 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcc
Confidence 3899995 99999999999999 999999988643
No 467
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=60.71 E-value=6.8 Score=38.77 Aligned_cols=29 Identities=24% Similarity=0.071 Sum_probs=25.9
Q ss_pred EEEECC---CCchHHHHHHHhcCCCCeEEEecC
Q psy1040 78 FVVVGG---GVAGPVVAGRLVENPNWKVLLLEA 107 (614)
Q Consensus 78 vIVVGs---G~aG~~~A~~Lae~~G~~VLlLEa 107 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~-G~~Vv~~~r 43 (315)
T 2o2s_A 12 AFVAGVADSHGYGWAIAKHLASA-GARVALGTW 43 (315)
T ss_dssp EEEECCSSSSSHHHHHHHHHHTT-TCEEEEEEC
T ss_pred EEEeCCCCCCChHHHHHHHHHHC-CCEEEEEec
Confidence 789996 78899999999999 999999864
No 468
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=60.65 E-value=4.4 Score=40.16 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
.-+.|||+|..|..+|..|+.. |. .|.|+|.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 4599999999999999999988 88 899999764
No 469
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=60.63 E-value=5.5 Score=37.40 Aligned_cols=32 Identities=25% Similarity=0.496 Sum_probs=28.5
Q ss_pred cEEEEC-CCCchHHHHHHHhcCCC-CeEEEecCCC
Q psy1040 77 DFVVVG-GGVAGPVVAGRLVENPN-WKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVG-sG~aG~~~A~~Lae~~G-~~VLlLEaG~ 109 (614)
-++|.| +|..|..+|.+|+++ | ++|.++.|.+
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADK-QTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcCh
Confidence 489999 599999999999999 9 8999998764
No 470
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=60.60 E-value=6.4 Score=37.55 Aligned_cols=30 Identities=23% Similarity=0.436 Sum_probs=26.0
Q ss_pred EEEECCCC-chHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGGGV-AGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG~-aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|++. .|..+|.+|+++ |++|+++.+.
T Consensus 12 vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~ 42 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAKG-GAKVVIVDRD 42 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCchHHHHHHHHHHHC-CCEEEEEcCC
Confidence 78888754 599999999999 9999999865
No 471
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=60.38 E-value=6.2 Score=37.83 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=27.3
Q ss_pred EEEECC---CCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGG---GVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGs---G~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcH
Confidence 788887 58899999999999 99999998754
No 472
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=64.57 E-value=1.8 Score=40.05 Aligned_cols=32 Identities=16% Similarity=0.339 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||+|..|..+|.+|++. |.+|.+.++.+
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQC-GYSVVFGSRNP 52 (201)
Confidence 488999999999999999998 99999988754
No 473
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=60.22 E-value=6.5 Score=37.65 Aligned_cols=30 Identities=27% Similarity=0.264 Sum_probs=26.1
Q ss_pred EEEECCC-C--chHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGGG-V--AGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG-~--aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|++ . .|..+|.+|+++ |++|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEA-GARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCc
Confidence 7888874 3 799999999999 9999999765
No 474
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=60.12 E-value=5.3 Score=40.26 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||.|..|..+|..|.+. |++|.+.++.
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~ 40 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRS 40 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSC
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 488999999999999999998 9999999865
No 475
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=59.92 E-value=5.9 Score=42.23 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=30.8
Q ss_pred cccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 75 ~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
...+.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45789999999999999999999 99999998764
No 476
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=59.86 E-value=4.6 Score=40.45 Aligned_cols=31 Identities=16% Similarity=0.441 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC--eEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG 108 (614)
-+.|||+|..|.++|..|+.. |. .|.+++.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 489999999999999999998 76 89999874
No 477
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=59.83 E-value=5.8 Score=38.90 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=29.9
Q ss_pred cEEEECC-CCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
-++|.|| |..|..++.+|.++ |++|.++.+...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 4899998 99999999999999 999999988754
No 478
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=59.60 E-value=4.5 Score=38.91 Aligned_cols=31 Identities=19% Similarity=0.353 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCe-EEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWK-VLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~-VLlLEaG 108 (614)
-+.|||+|..|...|..|++. |++ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRK-GFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCC
Confidence 589999999999999999998 998 8888865
No 479
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=59.57 E-value=7 Score=37.43 Aligned_cols=31 Identities=19% Similarity=0.102 Sum_probs=26.5
Q ss_pred EEEECCC---CchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 78 FVVVGGG---VAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 78 vIVVGsG---~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
+||-|++ ..|..+|.+|+++ |.+|++..+..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCH
Confidence 7888864 5799999999999 99999998753
No 480
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=59.46 E-value=5.6 Score=39.64 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC--eEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG~ 109 (614)
.-+.|||+|..|.++|..|+.. +. .|.|++.-.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4699999999999999999998 77 899999754
No 481
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=59.34 E-value=5.5 Score=39.69 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCC----CeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPN----WKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G----~~VLlLEaG~ 109 (614)
-+.|||+|..|...|..|+++ | .+|.+.++.+
T Consensus 24 kI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 589999999999999999998 8 7999998764
No 482
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=59.29 E-value=5.9 Score=37.23 Aligned_cols=30 Identities=20% Similarity=0.145 Sum_probs=26.7
Q ss_pred EEEECC-CCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGG-GVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHAS-GAKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788887 78899999999999 9999999865
No 483
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=59.25 E-value=6.2 Score=41.16 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
--+.|||.|..|+.+|..|++ |++|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 368999999999999999996 89999998764
No 484
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=59.25 E-value=6 Score=40.87 Aligned_cols=49 Identities=14% Similarity=0.224 Sum_probs=33.7
Q ss_pred cchhhhcCCCeEEEcccEEEEEEEcCCCCeEEEEEEEeCCCCceEEEEeccEEEEccCC
Q psy1040 275 FLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGA 333 (614)
Q Consensus 275 ~L~~~~~~~n~~I~~~~~V~~I~~d~~~~ra~GV~~~~~~~g~~~~v~A~k~VVlaaG~ 333 (614)
++...+++.+ +|+++++|++|..+ ++.++ |++.+ |+ +++|+ .||+|+|.
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~--~~~v~-v~~~~---g~--~~~ad-~vi~a~~~ 257 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQS--GDVVN-VTVKD---GH--AFQAH-SVIVATPM 257 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECS--SSSEE-EEETT---SC--CEEEE-EEEECSCG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEc--CCeEE-EEECC---CC--EEEeC-EEEEecCc
Confidence 3444455667 99999999999876 34443 44432 43 58897 69999983
No 485
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=59.24 E-value=6.6 Score=39.19 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCC-eEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNW-KVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~-~VLlLEaG~~ 110 (614)
-+.|||+|..|.++|..|+.. |. .|.|++.-+.
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQG 40 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCChH
Confidence 488999999999999999998 77 9999997643
No 486
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=59.18 E-value=6 Score=39.69 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=28.4
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC--eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG 108 (614)
--+.|||+|..|..+|+.|+.. |. .|.|+|.-
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 4589999999999999999998 77 89999864
No 487
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=59.15 E-value=8.1 Score=40.14 Aligned_cols=34 Identities=38% Similarity=0.603 Sum_probs=30.0
Q ss_pred cEEEECCCCchHHHHHHHhcC-CCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG~~ 110 (614)
.|||||||+||+.+|.+|++. ++.+|+|||+.+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 489999999999999999975 3589999998765
No 488
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=58.75 E-value=5.9 Score=42.03 Aligned_cols=32 Identities=22% Similarity=0.438 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHHHhcC-CCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVEN-PNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~-~G~~VLlLEaG 108 (614)
-+.|||.|..|+..|..|+++ +|++|+++++-
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 589999999999999999997 36899999865
No 489
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=58.58 E-value=3.8 Score=44.05 Aligned_cols=31 Identities=32% Similarity=0.384 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-++|+|+|.+|..+|..|++. |.+|.++.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~-G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEK-GAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 589999999999999999999 9999998775
No 490
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=58.49 E-value=4.5 Score=43.06 Aligned_cols=36 Identities=31% Similarity=0.280 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHHHhcCCCCeEEEecCCCCC
Q psy1040 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111 (614)
Q Consensus 74 ~~yDvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~~ 111 (614)
..+|+||||+|++|+.+|.+|++. ++|+|||+++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCC
Confidence 358999999999999999999997 999999998653
No 491
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=58.24 E-value=7 Score=37.33 Aligned_cols=31 Identities=10% Similarity=0.250 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
-+.|||.|..|...|..|++. |.+|.+.++.
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~-g~~v~~~~~~ 35 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQT-PHELIISGSS 35 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTS-SCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEECCC
Confidence 488999999999999999998 8999998865
No 492
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=58.22 E-value=5.9 Score=37.94 Aligned_cols=30 Identities=27% Similarity=0.241 Sum_probs=27.0
Q ss_pred EEEECC---CCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGG---GVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGs---G~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+.
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~ 43 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQA 43 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESC
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCC
Confidence 889997 58899999999999 9999999765
No 493
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=58.09 E-value=6.5 Score=38.17 Aligned_cols=30 Identities=10% Similarity=0.012 Sum_probs=26.7
Q ss_pred EEEECC---CCchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGG---GVAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGs---G~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+.
T Consensus 24 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~ 56 (285)
T 2p91_A 24 ALITGVANERSIAYGIAKSFHRE-GAQLAFTYAT 56 (285)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence 788887 58899999999999 9999999765
No 494
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=57.88 E-value=7.5 Score=36.96 Aligned_cols=32 Identities=22% Similarity=0.550 Sum_probs=27.4
Q ss_pred EEEECC-CCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 78 FVVVGG-GVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 78 vIVVGs-G~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
++|.|+ |..|..+|.+|+++ |++|+++.+...
T Consensus 25 vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~ 57 (251)
T 3orf_A 25 ILVLGGSGALGAEVVKFFKSK-SWNTISIDFREN 57 (251)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 788886 56799999999999 999999988754
No 495
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=57.75 E-value=6.2 Score=37.50 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=27.8
Q ss_pred EEEECCCCchHHHHHHHhcCCCC----eEEEecCC
Q psy1040 78 FVVVGGGVAGPVVAGRLVENPNW----KVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG~aG~~~A~~Lae~~G~----~VLlLEaG 108 (614)
+.|||.|..|...|..|+++ |+ +|.+.++.
T Consensus 5 i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 5 IGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLN 38 (247)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSC
T ss_pred EEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCC
Confidence 78999999999999999998 98 99999875
No 496
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=57.62 E-value=5.3 Score=40.03 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=28.5
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC--eEEEecCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW--KVLLLEAG 108 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~--~VLlLEaG 108 (614)
--+.|||+|..|..+|..|+.. |. .|.|+|.-
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 3589999999999999999998 87 89999874
No 497
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=57.59 E-value=6.9 Score=39.31 Aligned_cols=32 Identities=19% Similarity=0.193 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~ 109 (614)
-+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECCh
Confidence 489999999999999999998 99999887653
No 498
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=57.59 E-value=4.7 Score=42.43 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHHHHhcCCCC---eEEEecCCCC
Q psy1040 76 YDFVVVGGGVAGPVVAGRLVENPNW---KVLLLEAGPD 110 (614)
Q Consensus 76 yDvIVVGsG~aG~~~A~~Lae~~G~---~VLlLEaG~~ 110 (614)
--++|||+|..|.++|..|+++++. +|+++++-..
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 4699999999999999999998666 7999986543
No 499
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=57.45 E-value=7.5 Score=36.28 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=25.6
Q ss_pred EEEECCC-CchHHHHHHHhcCCCCeEEEecCC
Q psy1040 78 FVVVGGG-VAGPVVAGRLVENPNWKVLLLEAG 108 (614)
Q Consensus 78 vIVVGsG-~aG~~~A~~Lae~~G~~VLlLEaG 108 (614)
++|.|++ ..|..+|.+|+++ |++|+++.+.
T Consensus 4 vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~ 34 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAE-GKATYLTGRS 34 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred EEEecCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 6788864 5699999999999 9999999875
No 500
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=57.24 E-value=4.9 Score=40.28 Aligned_cols=32 Identities=16% Similarity=0.064 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHHHhcCCCCeEEEecCCCC
Q psy1040 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110 (614)
Q Consensus 77 DvIVVGsG~aG~~~A~~Lae~~G~~VLlLEaG~~ 110 (614)
.+||+|.|..|..+|..|.+. |. |+++|+-+.
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~-g~-v~vid~~~~ 148 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGS-EV-FVLAEDENV 148 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGS-CE-EEEESCGGG
T ss_pred CEEEECCcHHHHHHHHHHHhC-Cc-EEEEeCChh
Confidence 599999999999999999998 99 999997643
Done!