RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1040
(614 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 195 bits (495), Expect = 5e-57
Identities = 79/324 (24%), Positives = 131/324 (40%), Gaps = 27/324 (8%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP---DEPTVTSVPGFAASAVGTHLD 130
+ YD+++ GGG+ G VA +L ENP KVL++E G ++ + P GT +D
Sbjct: 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVD 82
Query: 131 WKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQ-GNPGWGF 189
Y T GK L G+ + G +TR D W++ G GW +
Sbjct: 83 QNYLTVPLI-----NNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNW 137
Query: 190 SDVLRYFIKSEHNLNRDQ--------VDPEYHGYDGPLKVQRFS---SYPPIGEDIIKAG 238
++ Y K+E + HG +G ++ + PI + ++
Sbjct: 138 DNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTV 197
Query: 239 KELG--YASGDFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKL 296
LG G + + +N VR R +L Y++ NL++ V K+
Sbjct: 198 SALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKV 257
Query: 297 NIDPKT--KRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDEL 354
+A+ V F V AK E++L AG+ SP +L SG+G KS LD+
Sbjct: 258 LFKQTASGPQAVGVNFGTNKAVNF-DVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQA 316
Query: 355 GIETISDLR--VGYNLVHHVGANL 376
+ + DL + + +G +
Sbjct: 317 NVTQLLDLPVGICSMMSRELGGVV 340
Score = 66.9 bits (162), Expect = 2e-12
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 548 NHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGAD 607
+ P G C M + VVDA +++G LRV+D SI PT ++S+ + +A K AD
Sbjct: 323 DLPVGICSMMS-RELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVAD 381
Query: 608 MVKESW 613
+ + +
Sbjct: 382 AILDDY 387
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 192 bits (487), Expect = 6e-56
Identities = 86/322 (26%), Positives = 140/322 (43%), Gaps = 26/322 (8%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP---DEPTVTSVPGFAASAVGTHLD 130
D+++ GGG+ G A RL ENPN VL++E+G D + G+ +D
Sbjct: 16 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVD 75
Query: 131 WKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGN-PGWGF 189
Y+T + G L G+ + G +TR H + D W+ GW +
Sbjct: 76 HAYETVELA----TNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNW 131
Query: 190 SDVLRYFIKSEHNLNRD--------QVDPEYHGYDGPL---KVQRFSSYPPIGEDIIKAG 238
+V Y +++E + + HG +G + Y PI + ++ A
Sbjct: 132 DNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIVKALMSAV 191
Query: 239 KELGYAS-GDFNGANQIGVNFAQVMVDNGVRSS-TPRMFLRDKYKQDNLKVQLNAHVMKL 296
++ G + DF + GV+ + S R +L Y++ NL+V +V K+
Sbjct: 192 EDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKV 251
Query: 297 NID--PKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDEL 354
+ T RA+ V+F V AK E++L AG+ SP +L SG+G KS L+ L
Sbjct: 252 LLSQNGTTPRAVGVEFGTHK-GNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPL 310
Query: 355 GIETISDLRVGY--NLVHHVGA 374
GI+T+ DL VG + +G
Sbjct: 311 GIDTVVDLPVGLCSMMPKEMGG 332
Score = 81.5 bits (200), Expect = 3e-17
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 548 NHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGAD 607
+ P G C M P + VVD R++GV LRV+D SI PT ++S+ + +A K +D
Sbjct: 317 DLPVGLCSMMP-KEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISD 375
Query: 608 MVKESW 613
+ E +
Sbjct: 376 AILEDY 381
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 166 bits (420), Expect = 8e-47
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 30/307 (9%)
Query: 69 NRPLQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTH 128
+ L+ YD+V+VGGG +G +A L E +KVL+LE G +V
Sbjct: 20 DLELEGSYDYVIVGGGTSGCPLAATLSEK--YKVLVLERGSLPTAYPNVLTADGFVYNLQ 77
Query: 129 LDWKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWG 188
+ KT ++ + RG++L GT + +Y R++ SIY W
Sbjct: 78 QEDDGKTPVERFVS---EDGIDNVRGRVLGGTSIINAGVYARANTSIYSAS----GVDWD 130
Query: 189 FSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGYASGDF 248
V + + E + + ++AG + F
Sbjct: 131 MDLVNQTYEWVEDTIVYKPNSQSWQ--------------SVTKTAFLEAGVHPNH---GF 173
Query: 249 NGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPKTK-RALS 307
+ ++ G DN L K +NL+V ++A V K+ A
Sbjct: 174 SLDHEEGTRITGSTFDNKGTRHAADELLN-KGNSNNLRVGVHASVEKIIFSNAPGLTATG 232
Query: 308 VQFKDTN-TNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLR-VG 365
V ++D+N T V++K E+I++AG IG+PQLL+LSGVGP+S+L L I + VG
Sbjct: 233 VIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVG 292
Query: 366 YNLVHHV 372
LV V
Sbjct: 293 QCLVGKV 299
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 158 bits (401), Expect = 7e-44
Identities = 47/342 (13%), Positives = 98/342 (28%), Gaps = 31/342 (9%)
Query: 72 LQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDW 131
+ +YD V+VG G G A LV +KV + + G + + +
Sbjct: 1 MDIKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNID 59
Query: 132 KYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQ--------- 182
K+ + + L+ T + R+ + + R
Sbjct: 60 KFVNVIQGQLMSVSVPV-NTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRV 118
Query: 183 -GNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKEL 241
G ++ F + + L L + S + + ++ +
Sbjct: 119 VGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAESYFQTGTDQFKESIRHN 178
Query: 242 GYASG-DFNGANQIGVNF----AQVMVDNGVRSSTPRMFLRDKY------KQDNLKVQLN 290
+ Q A V S+ + ++ +
Sbjct: 179 LVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPA 238
Query: 291 AHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSH 350
++ + S+ D + + +KA +LTAGA+ + QLL+ SG G
Sbjct: 239 VACERVVRNALNSEIESLHIHDLISGDRFEIKA-DVYVLTAGAVHNTQLLVNSGFGQLGR 297
Query: 351 LDELGIETISDLRVGYNLVHHVGANLKFSILDNGVSDNNGEI 392
+ + H +G + K DN + + +
Sbjct: 298 PNPTNPPELLP----SLGSHRMGFDEKE---DNCCVNTDSRV 332
Score = 82.7 bits (203), Expect = 1e-17
Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 5/142 (3%)
Query: 478 PKIHSNYLVMKQDIDVI---IEGIRIIQKLTRTKALQKWDFQIDSTKMPECKH-FEWDSN 533
+ + + + IE + I ++ + K D + +
Sbjct: 233 FNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGF 292
Query: 534 EYWECYIKTYTLPENHPGGTCKMGPADDY-SSVVDAQLRIHGVPNLRVMDASIFPTNINS 592
T G+ +MG + + V+ R+ G NL + PT +
Sbjct: 293 GQLGRPNPTNPPELLPSLGSHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGA 352
Query: 593 NPIATIIMIAEKGADMVKESWR 614
NP T + +A K + +K+++
Sbjct: 353 NPTLTAMSLAIKSCEYIKQNFT 374
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 140 bits (353), Expect = 2e-37
Identities = 63/320 (19%), Positives = 108/320 (33%), Gaps = 13/320 (4%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYK 134
YD+++VG G G + A RL E KVLLLE G T A A + L
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGPSTKQTGGTYVAPWATSSGLTKF-- 58
Query: 135 TERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLR 194
+ L T W + G + G + + + + G+
Sbjct: 59 DIPGLFESLFTDSNPFWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWT 118
Query: 195 YFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGYASGDFNGANQI 254
L+ ++ DG +++ + ++K D
Sbjct: 119 NHAPYTSKLSSRLPSTDHPSTDGQRYLEQ---SFNVVSQLLKGQGYNQATINDNPNYKDH 175
Query: 255 GVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTN 314
++ NG R+ +L+ + N + N V + + + L VQ D
Sbjct: 176 VFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRN--GSQILGVQTNDPT 233
Query: 315 TNEIK--TVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDEL--GIETISDLRVGYNLVH 370
V K +IL+AGA G+ ++L SG+GP + + + L ++
Sbjct: 234 LGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWIN 293
Query: 371 H-VGANLKFSILDNGVSDNN 389
VG S + V D+N
Sbjct: 294 LPVGMTTIGSSPQSAVVDSN 313
Score = 71.2 bits (173), Expect = 6e-14
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 548 NHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGAD 607
N P G +G S+VVD+ +++ G NL ++DA I P NP T++ AE+ A
Sbjct: 293 NLPVGMTTIGS-SPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAA 351
Query: 608 MV 609
+
Sbjct: 352 KI 353
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 138 bits (349), Expect = 8e-37
Identities = 47/336 (13%), Positives = 101/336 (30%), Gaps = 58/336 (17%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVP--------------- 118
+ +V+G G G V A RL + ++E G T S
Sbjct: 6 DRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMW 64
Query: 119 ----GFAASAVGTHLDWKYKTERNKYACLST-GGICEWPRGKMLAGTGAMTGMMYTRSHP 173
+ +R S + +G+ + G + G M
Sbjct: 65 LADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKR 124
Query: 174 SIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGED 233
+ ++E + ++ +YF ++ L + +D +
Sbjct: 125 NYFEEILPSVDSNEMYN---KYFPRANTGLGVNNIDQAWFESTEWY---------KFART 172
Query: 234 IIKAGKELGYASG------DFNGANQ--------IGVNFAQVMVDNGVRSSTPRMFLRDK 279
K + G+ + DF + G+ + +N + S + +L
Sbjct: 173 GRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQA 232
Query: 280 YKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDT--NTNEIKTVKAKKEIILTAGAIGSP 337
L + V K+ + +++++ D N K V A + AG++G+
Sbjct: 233 AATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTA-DRVFFAAGSVGTS 291
Query: 338 QLLMLSGVGPKSHLDELGIETISDLRVGYNLVHHVG 373
+LL+ + + +S +VG +
Sbjct: 292 KLLVSMK-------AQGHLPNLSS-QVGEGWGVLLN 319
Score = 36.8 bits (84), Expect = 0.006
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 571 RIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKG 605
R+ P L V+D S+ P N+ NP TI +AE+
Sbjct: 327 RLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERN 361
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 138 bits (348), Expect = 1e-36
Identities = 53/330 (16%), Positives = 100/330 (30%), Gaps = 45/330 (13%)
Query: 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAV---------- 125
VV+G G V A RL E + L+LE G +
Sbjct: 3 VPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFK 61
Query: 126 --------------GTHLDWKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRS 171
+ + G+ + G + G M
Sbjct: 62 NRTEAPLGSFLWLDVVNRNIDPYAGVLDRVN---YDQMSVYVGRGVGGGSLVNGGMAVEP 118
Query: 172 HPSIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSY---- 227
S ++E + RYF ++ L + +D ++ K R S
Sbjct: 119 KRSYFEEILPRV---DSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAGK 175
Query: 228 PPIGEDIIKAGKELGYASG-DFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLK 286
+G + + GY + + + +N + S + +L +
Sbjct: 176 AGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVT 235
Query: 287 VQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKT-VKAKKEIILTAGAIGSPQLLMLSGV 345
+Q V + AL+V+ KDT+ + T + + + L AG++GS +LL+ +
Sbjct: 236 IQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR- 294
Query: 346 GPKSHLDELGIETISDLRVGYNLVHHVGAN 375
D + ++ VG +G
Sbjct: 295 ------DTGTLPNLNS-EVGAGWGCVLGKA 317
Score = 34.2 bits (77), Expect = 0.038
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 557 GPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGAD 607
G D R+ G NL V D S+ P ++ NP TI +AE+ +
Sbjct: 309 GWGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVE 359
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger
[TaxId: 5061]}
Length = 196
Score = 82.9 bits (204), Expect = 8e-19
Identities = 28/199 (14%), Positives = 63/199 (31%), Gaps = 15/199 (7%)
Query: 367 NLVHHVGANLKFSI--LDNGVSDNNGEIDEKGTYLEESNEGLSSMKGNMDEMLNDGRPGR 424
NL A ++ I G T+ + S + + +++ +
Sbjct: 1 NLQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARG 60
Query: 425 SILSNT---------FNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPF 475
+ T + + ++N + +LLP +RG + + DP+
Sbjct: 61 GFHNTTALLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPY 120
Query: 476 -EYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNE 534
+ Y + + D+ ++ + ++ + A+Q + +P
Sbjct: 121 LHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTY---FAGETIPGDNLAYDADLS 177
Query: 535 YWECYIKTYTLPENHPGGT 553
W YI + P H GT
Sbjct: 178 AWTEYIPYHFRPNYHGVGT 196
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 196
Score = 79.0 bits (194), Expect = 1e-17
Identities = 24/199 (12%), Positives = 61/199 (30%), Gaps = 15/199 (7%)
Query: 367 NLVHHVGANLKFSILDNGVSDNNGEIDEK--GTYLEESNEGLSSMKGNMDEMLNDGRPGR 424
N+ + G T+ + + + + +D+ +
Sbjct: 1 NMQDQTTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARG 60
Query: 425 SILSNT---------FNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPF 475
+ T N L + + I +L+P +RG + + S+DP+
Sbjct: 61 GFHNVTALKVQYENYRNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPY 120
Query: 476 EYPK-IHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNE 534
+ + + + D+ ++ + LT A++++ +P + +
Sbjct: 121 LWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEY---FAGETLPGYNLVQNATLS 177
Query: 535 YWECYIKTYTLPENHPGGT 553
W Y+ P H +
Sbjct: 178 QWSDYVLQNFRPNWHAVSS 196
>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus
dulcis) [TaxId: 3755]}
Length = 170
Score = 58.2 bits (140), Expect = 2e-10
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 456 PTNLLPISRGRLVLR-SADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWD 514
P+S G L L+ S++ P + NY D+ + G++ I +L T AL+ +
Sbjct: 67 SKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYK 126
Query: 515 FQ-------IDSTKMPECKHFEWDSNEYWECYIKTYTLPENH-PGG 552
+ + +P K + +E + + H GG
Sbjct: 127 VEDLPGVEGFNILGIPLPKDQ--TDDAAFETFCRESVASYWHYHGG 170
>d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome
cellobiose dehydrogenase (CDH), substrate-binding domain
{Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
Length = 181
Score = 49.8 bits (118), Expect = 1e-07
Identities = 12/93 (12%), Positives = 28/93 (30%), Gaps = 13/93 (13%)
Query: 461 PISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDST 520
SRGR+ + + + +LV D V+++ + + + +
Sbjct: 102 IQSRGRIGIDA--ALRGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTMITPDVTQ 159
Query: 521 KMPECKHFEWDSNEYWECYIKTYTLPENHPGGT 553
+ E + T+ NH +
Sbjct: 160 -----------TLEEYVDAYDPATMNSNHWVSS 181
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 49.8 bits (117), Expect = 5e-07
Identities = 34/322 (10%), Positives = 75/322 (23%), Gaps = 36/322 (11%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEA--------------------GPDEPT 113
EEYD +V+G G+ +++G + N KVL ++
Sbjct: 5 EEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEG 63
Query: 114 VTSVPGFAASAVGTHLDWKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHP 173
G + L + + K++ G+ G +
Sbjct: 64 PPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPS 123
Query: 174 SIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGED 233
+ + + ++ + + D E + + +
Sbjct: 124 TETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDV 183
Query: 234 IIKAGKELGYASGDF---NGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLN 290
I G L D + +P ++
Sbjct: 184 IDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGL---------- 233
Query: 291 AHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGA-IGSPQLLMLSGVGPKS 349
+ + + ++I K + + G QL+ P
Sbjct: 234 -GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDR 292
Query: 350 HLDELGIETISDLRVGYNLVHH 371
+ G E+ Y+ H
Sbjct: 293 VPIDDGSESQVFCSCSYDATTH 314
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 48.1 bits (113), Expect = 2e-06
Identities = 24/130 (18%), Positives = 37/130 (28%), Gaps = 7/130 (5%)
Query: 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWK 132
+ D VVVG G AG A ++ KV+L+E P + G A A G
Sbjct: 14 HDTVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEP------VIGGNAKLAAGGMNAAW 66
Query: 133 YKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDV 192
++ K S + E + + D G +
Sbjct: 67 TDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTDVGMM 126
Query: 193 LRYFIKSEHN 202
+ H
Sbjct: 127 GGASVNRAHR 136
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 45.8 bits (107), Expect = 6e-06
Identities = 20/133 (15%), Positives = 38/133 (28%), Gaps = 7/133 (5%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYK 134
YD +V+GGG +G + A E VLLL+ G + A + G + +
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNK------LGRKLAISGGGRCNVTNR 54
Query: 135 TERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLR 194
++ G + + ++ R V+
Sbjct: 55 LPLDEIVKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVD 114
Query: 195 YFIKSEHNLNRDQ 207
+ +L
Sbjct: 115 ALLTRLKDLGVKI 127
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 44.4 bits (103), Expect = 2e-05
Identities = 29/289 (10%), Positives = 71/289 (24%), Gaps = 44/289 (15%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD------EPTVTSVPGFAASAVGT 127
+YD +V+G G+ +++G L + KVL ++ T++ + +
Sbjct: 4 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPIS 62
Query: 128 HLDWKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGW 187
+ + K +++ + G++ Y +QG
Sbjct: 63 KEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYK 122
Query: 188 GFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLK--------------------VQRFSSY 227
++ + + + ++ + K +F
Sbjct: 123 VPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLG 182
Query: 228 PPIGEDIIKAGKELGYASGDFNGANQIGVNFAQVMVDNGVRSSTPRMF-----------L 276
E I A A +P ++
Sbjct: 183 NSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQGF 242
Query: 277 RDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKK 325
L+ + ++ T + V ++ T KA
Sbjct: 243 ARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGV------KTKLGTFKAPL 285
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 44.1 bits (103), Expect = 2e-05
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
E D VVVG G AG A + +NPN +V ++E
Sbjct: 33 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 43.2 bits (100), Expect = 5e-05
Identities = 21/140 (15%), Positives = 37/140 (26%), Gaps = 4/140 (2%)
Query: 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKT 135
+D +VVG G G +L + K LL++A D P +
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAF-DPPHTNG--SHHGDTRIIRHAYGEGR 59
Query: 136 ERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRY 195
E A S E + +++ S + + + L
Sbjct: 60 EYVPLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLE 119
Query: 196 FIKSEHNLNRDQVDPEYHGY 215
+ V Y+
Sbjct: 120 GDEINKRWPGITVPENYNAI 139
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 42.4 bits (98), Expect = 1e-04
Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 3/160 (1%)
Query: 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTE 136
D ++ G G+ G A L + KV LLE+ + + +AV +
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPA 62
Query: 137 RNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRYF 196
A + G + SI+ + + +
Sbjct: 63 LAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQA 122
Query: 197 IKSEHNLNRDQVDPEY---HGYDGPLKVQRFSSYPPIGED 233
+++ + R + DG K Q + +G D
Sbjct: 123 VRTGLGVERIEERDGRVLIGARDGHGKPQALGADVLVGAD 162
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 42.3 bits (98), Expect = 1e-04
Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 4/117 (3%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLE-AGPDEPTVTSVPGFAASAVGTHLDWK 132
+ D +VG G AG A + NPN K+ L+ P + G +A+ H ++
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFE 64
Query: 133 YKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGF 189
Y + + + P +G
Sbjct: 65 YHFHDTVAGG--DWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGG 119
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 41.8 bits (97), Expect = 1e-04
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP--TVTSVPGFAASAVGTHLD 130
+ D +++G G AG +A RL + +V++L GP T + G AA
Sbjct: 5 EHSCDVLIIGSGAAGLSLALRLADQH--QVIVLSKGPVTEGSTFYAQGGIAA-VFDETDS 61
Query: 131 WKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFS 190
E A GIC+ + +A Q G + +
Sbjct: 62 IDSHVEDTLIAG---AGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLT 118
Query: 191 D 191
Sbjct: 119 R 119
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 41.3 bits (95), Expect = 2e-04
Identities = 22/146 (15%), Positives = 37/146 (25%), Gaps = 8/146 (5%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKY 133
Y+ VV+GGG+ G +A L + N L E+G + G SA L
Sbjct: 3 RHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT-------MGGRTTSAAAGMLGAHA 54
Query: 134 KTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVL 193
+ E +G + + + + D L
Sbjct: 55 ECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDL 114
Query: 194 RYFIKSEHNLNRDQVDPEYHGYDGPL 219
++ G
Sbjct: 115 DSVSWYSKEEVLEKEPYASGDIFGAS 140
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 41.1 bits (95), Expect = 2e-04
Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 5/118 (4%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKY 133
E +VVG G AG + + V+L++ P + + +AVGT +
Sbjct: 18 ETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH 76
Query: 134 KTERNKYAC----LSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGW 187
E + G + + + G+ + S + D+ +R G
Sbjct: 77 GVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARV 134
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 40.2 bits (93), Expect = 5e-04
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 74 EEYDFVVVGGGVAGPVVAGRL-----VENPNWKVLLLEAGP 109
EE D V+VG G AG A RL + +V L+E
Sbjct: 31 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 71
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 39.6 bits (91), Expect = 8e-04
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
E D V++G G AG A + KV+LLE P
Sbjct: 22 ETTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEP 56
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 39.1 bits (90), Expect = 0.001
Identities = 16/131 (12%), Positives = 35/131 (26%), Gaps = 10/131 (7%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKY 133
+ + +++G G AG A +L + V + + G G G
Sbjct: 3 QYSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK-------IGRKILMSGGGFCNFT 54
Query: 134 KTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVL 193
E LS + + + T + + +++ Q G ++
Sbjct: 55 NLEVTPAHYLSQNP--HFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIV 112
Query: 194 RYFIKSEHNLN 204
Sbjct: 113 EMLKSECDKYG 123
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 38.9 bits (89), Expect = 0.001
Identities = 27/220 (12%), Positives = 53/220 (24%), Gaps = 30/220 (13%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKY 133
+++D +V+G G G V A + + K L+E + T++ G +
Sbjct: 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL 60
Query: 134 KTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPG------- 186
+ + + + G++ M G
Sbjct: 61 DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH 120
Query: 187 WGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELG---- 242
+ + + ++ G V+ +G L
Sbjct: 121 GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPRRPVTTDLLAADSGVTLDERGF 180
Query: 243 --------------YASGDFNGANQIGVNFAQVMVDNGVR 268
YA GD G A + GV
Sbjct: 181 IYVDDYCATSVPGVYAIGDVVR----GAMLAHKASEEGVV 216
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 38.8 bits (89), Expect = 0.001
Identities = 22/156 (14%), Positives = 42/156 (26%), Gaps = 15/156 (9%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVE---NPNWKVLLLEAGPDEPTVTSVPGFAASAVGT---- 127
E D +++GGG +G A KV L+E E + G +A
Sbjct: 21 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTG 80
Query: 128 HLDWKYKTERNKYACLSTG-GICEWPRGKMLAGTGAMT-------GMMYTRSHPSIYDEW 179
+ + E G+ A T G+ ++ Y
Sbjct: 81 RSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVRE 140
Query: 180 QRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGY 215
+ G S ++ + + + +
Sbjct: 141 GQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIF 176
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 38.2 bits (88), Expect = 0.002
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
YD+++VG G+ G V A L + N KVL++E
Sbjct: 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRN 34
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 38.2 bits (87), Expect = 0.002
Identities = 23/150 (15%), Positives = 35/150 (23%), Gaps = 2/150 (1%)
Query: 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKT 135
V++G G+ G +A LV + +L+ GP S A V K
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGS-TSHAPGLVFQTNPSKTMA 60
Query: 136 ERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYD-EWQRQGNPGWGFSDVLR 194
KY + E G TR +
Sbjct: 61 SFAKYTVEKLLSLTEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAE 120
Query: 195 YFIKSEHNLNRDQVDPEYHGYDGPLKVQRF 224
+ + + DG R
Sbjct: 121 CQELYPLLDGENILGGLHVPSDGLASAARA 150
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 38.2 bits (87), Expect = 0.002
Identities = 24/166 (14%), Positives = 49/166 (29%), Gaps = 8/166 (4%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP--DEPTVTSVPGFAASAVGTHLDW 131
+ D +V+GGG+AG A + ++L P + + G AS + +
Sbjct: 4 QYCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSD 62
Query: 132 KYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSD 191
+ + + + +A T R + W R
Sbjct: 63 GDNEDLHFMDTVKGSDWGCDQK---VARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAII 119
Query: 192 VLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKA 237
+ +E + + G G K + + G ++ A
Sbjct: 120 NAQKTTITEEDFRHGLIHSRDFG--GTKKWRTCYTADATGHTMLFA 163
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 37.5 bits (86), Expect = 0.003
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
+E D V++GGG G V A + + +K +E
Sbjct: 2 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRG 36
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 36.8 bits (84), Expect = 0.004
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
E + +VVG G G V A R + KV ++E G
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKGN 36
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 36.9 bits (84), Expect = 0.004
Identities = 10/68 (14%), Positives = 19/68 (27%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKY 133
+ +D VV+G G G A +V +++ + K
Sbjct: 2 KIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKL 61
Query: 134 KTERNKYA 141
+Y
Sbjct: 62 MVTGAQYM 69
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 36.2 bits (82), Expect = 0.007
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLEAGPDEP 112
F+++GGG A A + +P +VL++ P+ P
Sbjct: 3 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 42
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 36.0 bits (82), Expect = 0.007
Identities = 23/194 (11%), Positives = 51/194 (26%), Gaps = 15/194 (7%)
Query: 72 LQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDW 131
+ + +D V++GGG AG V A + + + +E + G +
Sbjct: 2 INKSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRG------KLGGTCLNVGCIPSKA 54
Query: 132 KYKTERNKYAC---LSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGN---- 184
+ GI K+ + + ++
Sbjct: 55 LLNNSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYY 114
Query: 185 PGWG-FSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGY 243
G G F D + + L + + P +G AG
Sbjct: 115 KGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFVGRRPYIAGLGAEK 174
Query: 244 ASGDFNGANQIGVN 257
+ + ++ ++
Sbjct: 175 IGLEVDKRGRLVID 188
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 36.6 bits (83), Expect = 0.007
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 73 QEEYDFVVVGGGVAGPVVAGRL----VENPNWKVLLLEAGPDEPTVTSVPGFAASAV 125
+ D ++VG G AG + A L + P+ KV +++ + G +
Sbjct: 5 ESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTL 61
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 36.1 bits (82), Expect = 0.008
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 56 ADPCGRASSNLVRNRPLQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110
A G N+ N P EYD + +GGG AG + L + L+++ P
Sbjct: 25 APDGGEVIYNVDENDP--REYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPF 76
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 36.2 bits (82), Expect = 0.008
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
YD +V+GGG G A R + N KV L+E
Sbjct: 2 YDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 34
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 35.7 bits (81), Expect = 0.009
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
YD++ +GGG G R K L+EA
Sbjct: 2 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 35
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 36.4 bits (82), Expect = 0.010
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 71 PLQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
P ++ +++G GV+G A +L V LLEA
Sbjct: 1 PTKKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARD 38
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 35.9 bits (81), Expect = 0.012
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
D VVVGGG++G A L ++ V++LEA
Sbjct: 1 DVVVVGGGISGMAAAKLLHDS-GLNVVVLEARD 32
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 35.7 bits (80), Expect = 0.013
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
+VVG G++G A RL E +L+LEA
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 35.3 bits (80), Expect = 0.014
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
EYD VV+GGG G A + KV ++E
Sbjct: 4 DAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYK 39
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 35.0 bits (79), Expect = 0.014
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
+ +++GGG G V A R + +L+E
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQA 38
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 35.5 bits (80), Expect = 0.016
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 77 DFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
+ VVGGG++G VA L +LLE+
Sbjct: 2 NVAVVGGGISGLAVAHHLRSR-GTDAVLLESSA 33
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 34.9 bits (79), Expect = 0.016
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
YD++V+GGG G A R E + ++E+
Sbjct: 2 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 36
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 35.1 bits (79), Expect = 0.017
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVT 115
++D +++GGG G A + + KV++L+ P T
Sbjct: 3 DFDLIIIGGGSGGLAAAKEAAKF-DKKVMVLDFVTPTPLGT 42
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 35.2 bits (80), Expect = 0.019
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP--DEPTVTSVPGFAASAVGTHLD 130
E+D VV+G G AG A ++ ++ LL TV++ G + TH D
Sbjct: 6 REFDAVVIGAGGAGMRAALQISQS-GQTCALLSKVFPTRSHTVSAQGGITVALGNTHED 63
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 34.9 bits (79), Expect = 0.022
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 75 EYDFVVVGGGVAGPVVAGRLVE-NPNWKVLLLEAGP 109
D ++VG G +G A + + P+ KV ++E+
Sbjct: 50 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 85
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 34.6 bits (78), Expect = 0.024
Identities = 17/143 (11%), Positives = 26/143 (18%), Gaps = 9/143 (6%)
Query: 73 QEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWK 132
+ VV+G GV G A L + V +L P +S
Sbjct: 4 HSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDL--------PEDVSSQTFASPWAG 54
Query: 133 YKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDV 192
TG + + + W
Sbjct: 55 ANWTPFMTLTDGPRQAKWEESTFKKWVELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDIT 114
Query: 193 LRYFIKSEHNLNRDQVDPEYHGY 215
Y + Y
Sbjct: 115 PNYRPLPSSECPPGAIGVTYDTL 137
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 34.3 bits (77), Expect = 0.033
Identities = 36/261 (13%), Positives = 70/261 (26%), Gaps = 16/261 (6%)
Query: 79 VVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD----EPTVTSVPGFAASAVGTHLDWKYK 134
V+VG G+AG A L +V +LEA T + + +G +
Sbjct: 34 VIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKH 92
Query: 135 TERNKYA---CLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSD 191
+Y L + + + P + + G
Sbjct: 93 RIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQ 152
Query: 192 V----LRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGYASGD 247
+ L ++ N + +Y Y + + P D+I
Sbjct: 153 LYEESLGKVVEELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYV 212
Query: 248 FNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALS 307
+ + Y+ KV NA V+K+ + +
Sbjct: 213 SFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVT--- 269
Query: 308 VQFKDTNTNEIKTVKAKKEII 328
V ++ + +V A I+
Sbjct: 270 VVYETLSKET-PSVTADYVIV 289
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 34.3 bits (77), Expect = 0.035
Identities = 16/110 (14%), Positives = 29/110 (26%), Gaps = 1/110 (0%)
Query: 79 VVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTERN 138
VVGG ++G A L + V + E P + + +L + +
Sbjct: 8 AVVGGSISGLTAALMLRDA-GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDS 66
Query: 139 KYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWG 188
S+ + G+ + A S E
Sbjct: 67 ISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTS 116
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 34.0 bits (77), Expect = 0.048
Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
+ ++VG G +G V+ +L E +V +++
Sbjct: 1 KSKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRD 35
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 33.7 bits (76), Expect = 0.048
Identities = 21/188 (11%), Positives = 45/188 (23%), Gaps = 13/188 (6%)
Query: 79 VVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTERN 138
VV+G GV G A + E VL P N
Sbjct: 4 VVIGAGVIGLSTALCIHER-YHSVLQPLDVKV-YADRFTPFTTTDVAAGLWQPYTSEPSN 61
Query: 139 KYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRYFIK 198
+ + + A G+ + +P W + +
Sbjct: 62 PQEANWNQQTFNYLLSHIGSPNAANMGLTPV---SGYNLFREAVPDPYWKDMVLGFRKLT 118
Query: 199 SEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELG--YASGDFNGANQIGV 256
+ L+ +++ + + + E G + ++
Sbjct: 119 PRELDMFPDYRYGWFNTSLILEGRKYLQW------LTERLTERGVKFFLRKVESFEEVAR 172
Query: 257 NFAQVMVD 264
A V+++
Sbjct: 173 GGADVIIN 180
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 33.7 bits (75), Expect = 0.062
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 79 VVVGGGVAGPVVAGRLVENPNWKVLLLEAGP 109
V+G GV+G A +L + V + EA
Sbjct: 5 AVIGAGVSGLAAAYKLKIH-GLNVTVFEAEG 34
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 33.0 bits (74), Expect = 0.083
Identities = 8/39 (20%), Positives = 13/39 (33%)
Query: 74 EEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEP 112
YD VV+G G G +V +++
Sbjct: 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHG 40
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 33.0 bits (74), Expect = 0.083
Identities = 6/36 (16%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 76 YDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDE 111
++G G +G ++ L + ++LE +
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPD 37
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 32.5 bits (73), Expect = 0.12
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 68 RNRPLQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPD 110
R +P EE D +VVG G +G RL E V ++E D
Sbjct: 1 RRQP-PEEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 41
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 31.3 bits (69), Expect = 0.24
Identities = 17/147 (11%), Positives = 35/147 (23%), Gaps = 8/147 (5%)
Query: 76 YDFVVVGGGVAG---PVVAGRLVENPNWKVLLLEAGPDEPTVTSV-PGFAASAVGTHLDW 131
YD ++VG G AG + + R + L+ + +V S T
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARK----GIRTGLMGERFGGQILDTVDIENYISVPKTEGQK 57
Query: 132 KYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSD 191
+ I K++ + ++ G +
Sbjct: 58 LAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKLPN 117
Query: 192 VLRYFIKSEHNLNRDQVDPEYHGYDGP 218
E N + + +
Sbjct: 118 TNWLEGAVERNRMGEIIIDAKCETNVK 144
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 31.0 bits (68), Expect = 0.28
Identities = 13/147 (8%), Positives = 31/147 (21%), Gaps = 9/147 (6%)
Query: 79 VVVGGGVAGPVVAGRLVE-NPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTER 137
+V+G G L+ +P+ ++ E G +++ ++
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTG 63
Query: 138 NKYA--------CLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGF 189
K I + + + I G
Sbjct: 64 EKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDGVRP 123
Query: 190 SDVLRYFIKSEHNLNRDQVDPEYHGYD 216
+ H + D +
Sbjct: 124 NTAWLKGTLELHPNGLIKTDEYMRTSE 150
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 30.5 bits (67), Expect = 0.34
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 79 VVVGGGVAGPVVAGRLVE-NPNWKVLLLEAGP 109
VVVGGG G A + +P+ +V L+E
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 30.5 bits (67), Expect = 0.44
Identities = 13/143 (9%), Positives = 35/143 (24%), Gaps = 7/143 (4%)
Query: 79 VVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTERN 138
++G G A A L + + E +++ ++++ + ++
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD 67
Query: 139 KYACLST----GGICEWPRGKMLAGTGAM---TGMMYTRSHPSIYDEWQRQGNPGWGFSD 191
+ G A G+ P + + W +
Sbjct: 68 LGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEVLRDPKVKEALSPIKFNRWDLPE 127
Query: 192 VLRYFIKSEHNLNRDQVDPEYHG 214
V +++ D
Sbjct: 128 VDPETMQTSEPWVFAGGDIVGMA 150
>d2bcqa2 a.60.12.1 (A:329-385) DNA polymerase lambda {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 28.0 bits (63), Expect = 0.48
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 344 GVGPK--SHLDELGIETISDLRVGYNLVHHVGANLKF 378
G G K + G ++ D+R +L LK
Sbjct: 15 GAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKH 51
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 30.4 bits (67), Expect = 0.63
Identities = 17/124 (13%), Positives = 30/124 (24%), Gaps = 11/124 (8%)
Query: 79 VVVGGGVAGPVVAGRLV-ENPNWKVLLLEAGPDEPTVTSVPG---FAASAVGTHLDWKYK 134
++G G +G V A L+ E +V L E PG S + L
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS-------PGGVWNYTSTLSNKLPVPST 60
Query: 135 TERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLR 194
+ + T + + Q + R
Sbjct: 61 NPILTTEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQR 120
Query: 195 YFIK 198
+ +
Sbjct: 121 IYAQ 124
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga
maritima [TaxId: 2336]}
Length = 180
Score = 29.8 bits (66), Expect = 0.70
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 342 LSGVGPK--SHLDELGIETISDL 362
GVGP L +LGIET+ DL
Sbjct: 15 AKGVGPNRKKKLKKLGIETLRDL 37
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 29.3 bits (64), Expect = 0.79
Identities = 11/98 (11%), Positives = 27/98 (27%), Gaps = 2/98 (2%)
Query: 79 VVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTERN 138
V+VG G G +A +L + ++V +++ P + + +
Sbjct: 4 VIVGNGPGGFELAKQLSQ--TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDW 61
Query: 139 KYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIY 176
+ E + +T +
Sbjct: 62 YRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVL 99
>d3erja1 c.131.1.1 (A:2-117) Hypothetical protein AF2095
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 116
Score = 28.6 bits (64), Expect = 0.92
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 150 EWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNP 185
+ RGK+ + Y +S S+ +W +G
Sbjct: 13 KLSRGKLAVQVAHAAIIGYLKSDSSLRRKWLDEGQK 48
>d1t94a2 e.8.1.7 (A:75-407) DNA polymerase kappa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 333
Score = 28.6 bits (63), Expect = 2.0
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 342 LSGVGPK--SHLDELGIETISDLR 363
+SG+G L LGI T ++L
Sbjct: 280 VSGIGKVTEKMLKALGIITCTELY 303
>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 255
Score = 27.9 bits (62), Expect = 2.9
Identities = 7/31 (22%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 55 LADPCGRASSNLVRNR--PLQEEYDFVVVGG 83
+ D G+ +++N ++ ++DFV+V
Sbjct: 6 IGDVFGQPGRRVLQNHLPTIRPQFDFVIVNM 36
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 28.1 bits (62), Expect = 3.2
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Query: 76 YDFVVVGGGVAG---PVVAGRLVENPNWKVLLLEAGPDEPTVTSVP 118
Y ++VG G +G + +V LL D + +P
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQK----GVRVGLLTQSLDAVMMPFLP 44
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 130
Score = 26.6 bits (58), Expect = 5.2
Identities = 7/51 (13%), Positives = 20/51 (39%)
Query: 274 MFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAK 324
+ + + V N+ V++ D + ++ K+ T ++ +K
Sbjct: 74 IMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVS 124
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 27.2 bits (59), Expect = 6.1
Identities = 12/72 (16%), Positives = 17/72 (23%), Gaps = 7/72 (9%)
Query: 79 VVVGGGVAGPVVAGRLVEN-PNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTER 137
VVG G AG A L+++ V + E G V
Sbjct: 5 CVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL------VPFGLVRFGVAPDHPEVKNVIN 58
Query: 138 NKYACLSTGGIC 149
+
Sbjct: 59 TFTQTARSDRCA 70
>d2pbea1 a.160.1.5 (A:138-282) Aminoglycoside 6-adenylyltransferase
AadK {Bacillus subtilis [TaxId: 1423]}
Length = 145
Score = 25.8 bits (57), Expect = 8.8
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 503 KLTRTKALQKWDFQIDSTKMPECKHFE-WDSNEYWECYIKTY 543
++ + + K K + + SN+ WE + TY
Sbjct: 55 RMMAWHIASQKGYSFSMGKN--YKFMKRYLSNKEWEELMSTY 94
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.409
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,337,181
Number of extensions: 112038
Number of successful extensions: 365
Number of sequences better than 10.0: 1
Number of HSP's gapped: 325
Number of HSP's successfully gapped: 83
Length of query: 614
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 523
Effective length of database: 1,158,166
Effective search space: 605720818
Effective search space used: 605720818
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)