BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10407
(210 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1F49|A Chain A, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|B Chain B, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|C Chain C, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|D Chain D, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|E Chain E, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|F Chain F, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|G Chain G, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1F49|H Chain H, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|I Chain I, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|J Chain J, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|K Chain K, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|L Chain L, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|M Chain M, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|N Chain N, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|O Chain O, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1GHO|P Chain P, E. Coli (Lac Z) Beta-Galactosidase (Ncs Constrained
Monomer- Monoclinic)
pdb|1JZ1|I Chain I, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|J Chain J, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|K Chain K, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|L Chain L, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|M Chain M, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|N Chain N, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|O Chain O, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ1|P Chain P, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains I-P, See Remark 400
pdb|1JZ0|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|E Chain E, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|F Chain F, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|G Chain G, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JZ0|H Chain H, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate. Chains A-H, See Remark 400
pdb|1JYZ|I Chain I, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|J Chain J, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|K Chain K, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|L Chain L, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|M Chain M, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|N Chain N, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|O Chain O, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYZ|P Chain P, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains I-P, See Remark 400.
pdb|1JYY|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|E Chain E, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|F Chain F, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|G Chain G, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400.
pdb|1JYY|H Chain H, E. Coli (Lacz) Beta-Galactosidase In Complex With 2-F-
Lactose. Chains A-H, See Remark 400
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFXIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|1BGM|I Chain I, Beta-Galactosidase (Chains I-P)
pdb|1BGM|J Chain J, Beta-Galactosidase (Chains I-P)
pdb|1BGM|K Chain K, Beta-Galactosidase (Chains I-P)
pdb|1BGM|L Chain L, Beta-Galactosidase (Chains I-P)
pdb|1BGM|M Chain M, Beta-Galactosidase (Chains I-P)
pdb|1BGM|N Chain N, Beta-Galactosidase (Chains I-P)
pdb|1BGM|O Chain O, Beta-Galactosidase (Chains I-P)
pdb|1BGM|P Chain P, Beta-Galactosidase (Chains I-P)
pdb|1BGL|A Chain A, Beta-Galactosidase (Chains A-H)
pdb|1BGL|B Chain B, Beta-Galactosidase (Chains A-H)
pdb|1BGL|C Chain C, Beta-Galactosidase (Chains A-H)
pdb|1BGL|D Chain D, Beta-Galactosidase (Chains A-H)
pdb|1BGL|E Chain E, Beta-Galactosidase (Chains A-H)
pdb|1BGL|F Chain F, Beta-Galactosidase (Chains A-H)
pdb|1BGL|G Chain G, Beta-Galactosidase (Chains A-H)
pdb|1BGL|H Chain H, Beta-Galactosidase (Chains A-H)
pdb|1JZ2|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
pdb|1JZ2|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
pdb|1JZ2|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
pdb|1JZ2|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl-
Enzyme Intermediate (Orthorhombic)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|1JZ8|A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JZ8|B Chain B, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JZ8|C Chain C, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JZ8|D Chain D, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Allolactose
pdb|1JYW|A Chain A, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYW|B Chain B, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYW|C Chain C, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYW|D Chain D, E. Coli (lacz) Beta-galactosidase (e537q) In Complex With
Pnpg
pdb|1JYV|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYV|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYV|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYV|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Onpg
pdb|1JYN|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
pdb|1JYN|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
pdb|1JYN|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
pdb|1JYN|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E537q) In Complex With
Lactose
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|1F4A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4A|B Chain B, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4A|C Chain C, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4A|D Chain D, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained
Monomer- Orthorhombic)
pdb|1F4H|A Chain A, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
pdb|1F4H|B Chain B, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
pdb|1F4H|C Chain C, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
pdb|1F4H|D Chain D, E. Coli (Lacz) Beta-Galactosidase (Orthorhombic)
Length = 1021
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 726 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 785
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 786 PLDNDIGVSE 795
>pdb|3VDA|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDA|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDA|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDA|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460t)
pdb|3VDB|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDB|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDB|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDB|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Galactonolactone
pdb|3VDC|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
pdb|3VDC|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
pdb|3VDC|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
pdb|3VDC|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
Iptg
Length = 1052
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVSE 826
>pdb|3VD5|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD5|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD5|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD5|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460s)
pdb|3VD7|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD7|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD7|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD7|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Galactotetrazole
pdb|3VD9|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
pdb|3VD9|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
pdb|3VD9|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
pdb|3VD9|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460s) In Complex With
Iptg
Length = 1052
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVSE 826
>pdb|3VD3|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD3|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD3|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD3|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460d)
pdb|3VD4|A Chain A, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
pdb|3VD4|B Chain B, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
pdb|3VD4|C Chain C, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
pdb|3VD4|D Chain D, E. Coli (Lacz) Beta-Galactosidase (N460d) In Complex With
Iptg
Length = 1052
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVSE 826
>pdb|3MUZ|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MUZ|2 Chain 2, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MUZ|3 Chain 3, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MUZ|4 Chain 4, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Iptg
pdb|3MV0|1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV0|2 Chain 2, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV0|3 Chain 3, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV0|4 Chain 4, E. Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
D- Galctopyranosyl-1-One
pdb|3MV1|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
pdb|3MV1|2 Chain 2, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
pdb|3MV1|3 Chain 3, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
pdb|3MV1|4 Chain 4, E.Coli (Lacz) Beta-Galactosidase (R599a) In Complex With
Guanidinium
Length = 1052
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVSE 826
>pdb|3MUY|1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a)
pdb|3MUY|2 Chain 2, E. Coli (Lacz) Beta-Galactosidase (R599a)
pdb|3MUY|3 Chain 3, E. Coli (Lacz) Beta-Galactosidase (R599a)
pdb|3MUY|4 Chain 4, E. Coli (Lacz) Beta-Galactosidase (R599a)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3I3B|A Chain A, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3B|B Chain B, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3B|C Chain C, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3B|D Chain D, E.Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
D- Galactopyranosyl-1-On
pdb|3I3D|A Chain A, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3D|B Chain B, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3D|C Chain C, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3D|D Chain D, E. Coli (Lacz) Beta-Galactosidase (M542a) In Complex With
Iptg
pdb|3I3E|A Chain A, E. Coli (Lacz) Beta-Galactosidase (M542a)
pdb|3I3E|B Chain B, E. Coli (Lacz) Beta-Galactosidase (M542a)
pdb|3I3E|C Chain C, E. Coli (Lacz) Beta-Galactosidase (M542a)
pdb|3I3E|D Chain D, E. Coli (Lacz) Beta-Galactosidase (M542a)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3IAQ|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416v)
pdb|3IAQ|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E416v)
pdb|3IAQ|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E416v)
pdb|3IAQ|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E416v)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3IAP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (E416q)
pdb|3IAP|B Chain B, E. Coli (Lacz) Beta-Galactosidase (E416q)
pdb|3IAP|C Chain C, E. Coli (Lacz) Beta-Galactosidase (E416q)
pdb|3IAP|D Chain D, E. Coli (Lacz) Beta-Galactosidase (E416q)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3CZJ|A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
pdb|3CZJ|B Chain B, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
pdb|3CZJ|C Chain C, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
pdb|3CZJ|D Chain D, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With
D- Galctopyranosyl-1-One"
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3DYO|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYO|B Chain B, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYO|C Chain C, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYO|D Chain D, E. Coli (Lacz) Beta-Galactosidase (H418n) In Complex With
Iptg
pdb|3DYP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418n)
pdb|3DYP|B Chain B, E. Coli (Lacz) Beta-Galactosidase (H418n)
pdb|3DYP|C Chain C, E. Coli (Lacz) Beta-Galactosidase (H418n)
pdb|3DYP|D Chain D, E. Coli (Lacz) Beta-Galactosidase (H418n)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3DYM|A Chain A, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3DYM|B Chain B, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3DYM|C Chain C, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3DYM|D Chain D, E. Coli (Lacz) Beta-Galactosidase (H418e)
pdb|3E1F|1 Chain 1, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
pdb|3E1F|2 Chain 2, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
pdb|3E1F|3 Chain 3, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
pdb|3E1F|4 Chain 4, E.Coli (Lacz) Beta-Galactosidase (H418e) In Complex With
Galactose
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|1JZ7|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With
Galactose
pdb|1JZ7|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With
Galactose
pdb|1JZ7|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With
Galactose
pdb|1JZ7|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With
Galactose
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|1DP0|A Chain A, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1DP0|B Chain B, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1DP0|C Chain C, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1DP0|D Chain D, E. Coli Beta-Galactosidase At 1.7 Angstrom
pdb|1JZ6|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ6|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ6|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ6|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With Galacto-
Tetrazole
pdb|1JZ5|A Chain A, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ5|B Chain B, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ5|C Chain C, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ5|D Chain D, E. Coli (lacz) Beta-galactosidase In Complex With
D-galctopyranosyl-1- On
pdb|1JZ4|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ4|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ4|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ4|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl-Enzyme Intermediate (Low Bis-Tris)
pdb|1JZ3|A Chain A, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JZ3|B Chain B, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JZ3|C Chain C, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JZ3|D Chain D, E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy-
Galactosyl Enzyme Intermediate
pdb|1JYX|A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1JYX|B Chain B, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1JYX|C Chain C, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1JYX|D Chain D, E. Coli (Lacz) Beta-Galactosidase In Complex With Iptg
pdb|1HN1|A Chain A, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
pdb|1HN1|B Chain B, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
pdb|1HN1|C Chain C, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
pdb|1HN1|D Chain D, E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
Length = 1023
Score = 30.0 bits (66), Expect = 0.86, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 728 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 787
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 788 PLDNDIGVSE 797
>pdb|3T0A|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0A|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0A|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0A|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796t)
pdb|3T0B|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0B|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0B|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0B|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796t) Iptg Complex
pdb|3T0D|A Chain A, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
pdb|3T0D|B Chain B, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
pdb|3T0D|C Chain C, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
pdb|3T0D|D Chain D, E.Coli (Lacz) Beta-Galactosidase (S796t) In Complex With
Galactonolactone
Length = 1052
Score = 30.0 bits (66), Expect = 0.99, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVTE 826
>pdb|3T2O|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2O|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2O|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2O|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796d)
pdb|3T2P|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2P|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2P|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2P|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Iptg
pdb|3T2Q|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
pdb|3T2Q|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
pdb|3T2Q|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
pdb|3T2Q|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796d) In Complex With
Galactonolactone
Length = 1052
Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVDE 826
>pdb|3SEP|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3SEP|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3SEP|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3SEP|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796a)
pdb|3T08|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T08|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T08|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T08|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796a) Iptg Complex
pdb|3T09|A Chain A, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
pdb|3T09|B Chain B, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
pdb|3T09|C Chain C, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
pdb|3T09|D Chain D, E. Coli (Lacz) Beta-Galactosidase (S796a) Galactonolactone
Complex
Length = 1052
Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 101 VTLFGEDKAVPMLSSARL--------QRWSLILSNFDYS---IKYKKGTQIPVADALSRL 149
VTL A+P L+++ + +RW + S I KK P+ D +R
Sbjct: 757 VTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRA 816
Query: 150 PLSNDLGFKE 159
PL ND+G E
Sbjct: 817 PLDNDIGVAE 826
>pdb|3UCP|A Chain A, Outer Membrane Endecaheme Cytochrome Unda From Shewanella
Sp. Hrcr-6
pdb|3UFH|A Chain A, Crystal Structure Of Unda With Iron Citrate Bound
pdb|3UFK|A Chain A, Crystal Structure Of Unda Complexed With Iron
Nitrilotriacetate
Length = 874
Score = 26.9 bits (58), Expect = 8.2, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 60 HKKYFSQPVPGSPVEMGCCTNSLH 83
H Y P GSP++MG +++H
Sbjct: 288 HTSYSKDPETGSPLDMGAMVHAIH 311
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,207,237
Number of Sequences: 62578
Number of extensions: 240713
Number of successful extensions: 513
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 492
Number of HSP's gapped (non-prelim): 41
length of query: 210
length of database: 14,973,337
effective HSP length: 95
effective length of query: 115
effective length of database: 9,028,427
effective search space: 1038269105
effective search space used: 1038269105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)