Diaphorina citri psyllid: psy1040

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610----

MIFNYLDPASSVMDQPTCSCDYQDTAYIARSCGSSLNVTLFMTLVDVMLRTQCDLADPCGRASSNLVRNRPLQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGYASGDFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLRVGYNLVHHVGANLKFSILDNGVSDNNGEIDEKGTYLEESNEGLSSMKGNMDEMLNDGRPGRSILSNTFNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGADMVKESWR

cccccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEccccHHHHHHHccccccccEEEEEcccccccccccHHHHHHcccccccccccccccccccccccccEEcccccccccccHHHHHHHHHccccccHHHHHHccccccccccHHHHHHHHccccccccccccccccccccEECccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEEEEEEEccccEEEEEEEEEccccEEEEEEEccEEEEcccccHHHHHHHHcccccHHHHHHccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEccccccccccccccccEEEEECcccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHcc

****Y**PASSVMDQPTCSCDYQDTAYIARSCGSSLNVTLFMTLVDVMLRTQCDLADPCGRASSNLVRNRPLQEEYDFVVVGGGVAGPVVAGRLVENPNWKVLLLEAGPDEPTVTSVPGFAASAVGTHLDWKYKTERNKYACLSTGGICEWPRGKMLAGTGAMTGMMYTRSHPSIYDEWQRQGNPGWGFSDVLRYFIKSEHNLNRDQVDPEYHGYDGPLKVQRFSSYPPIGEDIIKAGKELGYASGDFNGANQIGVNFAQVMVDNGVRSSTPRMFLRDKYKQDNLKVQLNAHVMKLNIDPKTKRALSVQFKDTNTNEIKTVKAKKEIILTAGAIGSPQLLMLSGVGPKSHLDELGIETISDLRVGYNLVHHVGANLKFSILDNGVSDNNGEIDEKGTYLEESNEGLSSMKGNMDEMLNDGRPGRSILSNTFNALFSNNNKEEDKMPCGRRSIYARPTNLLPISRGRLVLRSADPFEYPKIHSNYLVMKQDIDVIIEGIRIIQKLTRTKALQKWDFQIDSTKMPECKHFEWDSNEYWECYIKTYTLPENHPGGTCKMGPADDYSSVVDAQLRIHGVPNLRVMDASIFPTNINSNPIATIIMIAEKGADMVKESWR

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
L-sorbose 1-dehydrogenase		confident	Q47944
Uncharacterized GMC-type oxidoreductase Mb1310		confident	P64264
Glucose dehydrogenase [acceptor]		confident	P18172

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0016491 [MF]	oxidoreductase activity	probable	GO:0003824, GO:0003674
GO:0008364 [BP]	pupal chitin-based cuticle development	probable	GO:0032502, GO:0042337, GO:0042335, GO:0044707, GO:0040003, GO:0035209, GO:0048856, GO:0007591, GO:0009791, GO:0002165, GO:0032501, GO:0044767, GO:0008150, GO:0042303, GO:0007275, GO:0044699
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006006 [BP]	glucose metabolic process	probable	GO:0044238, GO:0005975, GO:0005996, GO:0019318, GO:0071704, GO:0008150, GO:0008152, GO:0044723
GO:0005618 [CC]	cell wall	probable	GO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005886 [CC]	plasma membrane	probable	GO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3T37, chain A
Confidence level:very confident
Coverage over the Query: 75-612
View the alignment between query and template
View the model in PyMOL

Template: 1GPE, chain A
Confidence level:very confident
Coverage over the Query: 73-613
View the alignment between query and template
View the model in PyMOL