Query psy1041
Match_columns 1095
No_of_seqs 441 out of 2777
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:12:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1041.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1041hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q55_A EP-cadherin, C-cadherin 100.0 6.1E-89 2.1E-93 859.3 42.9 617 363-1074 21-697 (880)
2 1q55_A EP-cadherin, C-cadherin 100.0 6E-87 2E-91 841.1 41.4 622 144-966 23-697 (880)
3 3q2w_A Cadherin-2; cell adhesi 100.0 2.6E-77 8.9E-82 723.9 50.0 503 492-1065 6-547 (559)
4 3q2w_A Cadherin-2; cell adhesi 100.0 8.2E-77 2.8E-81 719.6 54.1 507 385-964 6-552 (559)
5 3q2v_A Cadherin-1; cell adhesi 100.0 2.5E-76 8.6E-81 714.0 51.1 502 386-967 7-545 (550)
6 3q2v_A Cadherin-1; cell adhesi 100.0 1.1E-75 3.9E-80 708.2 51.2 502 492-1072 6-542 (550)
7 1l3w_A EP-cadherin, C-cadherin 100.0 1.4E-76 4.7E-81 714.8 41.6 499 383-963 10-545 (546)
8 1l3w_A EP-cadherin, C-cadherin 100.0 2.3E-76 8E-81 712.8 42.1 497 490-1069 10-543 (546)
9 3ubh_A Neural-cadherin; cell a 100.0 7.7E-61 2.7E-65 559.7 46.6 379 608-1061 8-418 (419)
10 3ubh_A Neural-cadherin; cell a 100.0 1.6E-60 5.4E-65 557.1 46.4 386 395-848 8-418 (419)
11 2a62_A Cadherin-8; extracellul 100.0 1.6E-52 5.6E-57 469.5 22.6 299 757-1060 6-322 (322)
12 3ubf_A Neural-cadherin; cell a 100.0 4.9E-49 1.7E-53 442.7 33.7 290 768-1065 4-315 (316)
13 2a62_A Cadherin-8; extracellul 100.0 4.6E-48 1.6E-52 433.4 24.6 294 385-683 6-321 (322)
14 3ubf_A Neural-cadherin; cell a 100.0 3E-45 1E-49 411.8 34.4 286 504-853 5-316 (316)
15 3mvs_A Cadherin-23, otocadheri 100.0 2.1E-38 7E-43 334.0 23.5 202 851-1065 3-209 (210)
16 3mvs_A Cadherin-23, otocadheri 100.0 2.9E-38 1E-42 332.8 21.9 206 746-960 3-210 (210)
17 2a4e_A Cadherin-11; dimer, cal 100.0 6.4E-38 2.2E-42 330.1 24.1 203 756-962 6-215 (215)
18 2a4e_A Cadherin-11; dimer, cal 100.0 2.4E-37 8.1E-42 325.8 26.3 201 860-1070 5-215 (215)
19 2x2u_A Proto-oncogene tyrosine 100.0 3.7E-39 1.3E-43 347.2 12.3 211 750-964 2-245 (246)
20 2x2u_A Proto-oncogene tyrosine 100.0 3.6E-39 1.2E-43 347.4 12.0 212 855-1072 2-245 (246)
21 2qvi_A Cadherin-2; beta barrel 100.0 6.8E-35 2.3E-39 307.6 20.6 195 862-1061 6-215 (215)
22 3ppe_A Vascular endothelial ca 100.0 4.8E-34 1.7E-38 298.5 24.3 191 757-955 6-203 (203)
23 2qvi_A Cadherin-2; beta barrel 100.0 2E-34 6.7E-39 304.1 20.3 197 757-955 6-215 (215)
24 3qrb_A Cadherin-1; cell adhesi 100.0 6.8E-34 2.3E-38 300.4 22.7 194 861-1061 5-213 (213)
25 3ppe_A Vascular endothelial ca 100.0 1.6E-33 5.4E-38 294.6 24.9 190 861-1061 5-203 (203)
26 3qrb_A Cadherin-1; cell adhesi 100.0 8.9E-34 3.1E-38 299.5 22.4 192 757-955 6-213 (213)
27 3lnd_A CDH6 protein, cadherin 100.0 2.5E-34 8.6E-39 302.1 16.5 192 862-1061 6-207 (207)
28 3lnd_A CDH6 protein, cadherin 100.0 2.1E-34 7.1E-39 302.7 15.6 195 757-955 6-207 (207)
29 3k5r_A Cadherin 13; mouse, str 100.0 1.7E-33 5.7E-38 298.6 21.4 193 861-1061 6-218 (218)
30 3k5r_A Cadherin 13; mouse, str 100.0 4.5E-33 1.5E-37 295.2 20.1 193 757-955 7-218 (218)
31 4apx_B Protocadherin-15, otoca 100.0 7.5E-30 2.6E-34 272.6 21.0 201 859-1061 20-237 (242)
32 4apx_B Protocadherin-15, otoca 100.0 4.7E-29 1.6E-33 266.4 20.5 201 382-584 20-237 (242)
33 2yst_A Protocadherin-7; BH-PCD 99.9 7.2E-26 2.5E-30 215.1 8.7 117 951-1069 2-119 (119)
34 2yst_A Protocadherin-7; BH-PCD 99.9 1.2E-25 4.3E-30 213.4 10.1 114 146-263 2-119 (119)
35 2ee0_A Protocadherin-9; Ca dom 99.9 1E-23 3.4E-28 198.2 9.9 108 146-259 2-114 (114)
36 2ee0_A Protocadherin-9; Ca dom 99.9 6.7E-24 2.3E-28 199.4 7.9 111 951-1063 2-114 (114)
37 2yqg_A Desmoglein-2, HDGC; cad 99.8 1.8E-21 6.3E-26 185.2 5.8 115 744-859 5-123 (123)
38 2yqg_A Desmoglein-2, HDGC; cad 99.8 3.4E-21 1.2E-25 183.3 5.6 115 956-1073 5-122 (123)
39 1ncg_A N-cadherin; cell adhesi 99.8 5E-19 1.7E-23 164.8 9.2 98 756-856 7-110 (110)
40 1ncg_A N-cadherin; cell adhesi 99.8 1E-18 3.5E-23 162.8 8.8 100 967-1071 6-110 (110)
41 1zvn_A Mn-cadherin; strand dim 99.7 1.2E-16 3.9E-21 145.1 11.5 91 968-1061 6-99 (99)
42 1zvn_A Mn-cadherin; strand dim 99.7 1.4E-16 4.9E-21 144.4 11.4 91 756-848 6-99 (99)
43 1zxk_A Cadherin-8; strand dime 99.7 1.4E-16 4.8E-21 144.3 10.5 91 968-1061 5-98 (98)
44 1wyj_A Protocadherin beta 14; 99.7 6.3E-18 2.1E-22 160.7 1.5 106 754-864 11-123 (125)
45 1zxk_A Cadherin-8; strand dime 99.7 1.7E-16 5.8E-21 143.8 10.6 91 756-848 5-98 (98)
46 1wyj_A Protocadherin beta 14; 99.7 1E-17 3.4E-22 159.3 2.0 106 382-494 11-123 (125)
47 3k6d_A T-cadherin; cell adhesi 99.6 7.9E-16 2.7E-20 140.0 10.0 90 968-1061 5-99 (99)
48 2omz_B Epithelial-cadherin; le 99.6 9.6E-16 3.3E-20 141.0 9.0 91 969-1062 10-105 (105)
49 3k6f_A T-cadherin; cell adhesi 99.6 2.1E-15 7.2E-20 137.5 11.1 89 969-1061 7-100 (100)
50 3k6i_A T-cadherin; cell adhesi 99.6 2.9E-15 9.8E-20 136.4 11.9 89 969-1061 6-99 (99)
51 3k6d_A T-cadherin; cell adhesi 99.6 1.9E-15 6.4E-20 137.5 9.0 88 757-848 6-99 (99)
52 2omz_B Epithelial-cadherin; le 99.6 3.5E-15 1.2E-19 137.2 9.7 89 758-849 11-105 (105)
53 3k6i_A T-cadherin; cell adhesi 99.6 8E-15 2.7E-19 133.5 11.3 87 758-848 7-99 (99)
54 3k6f_A T-cadherin; cell adhesi 99.6 5.9E-15 2E-19 134.5 10.4 88 757-848 7-100 (100)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.3 4.5E-13 1.5E-17 122.6 1.8 94 755-852 4-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.3 9.5E-13 3.2E-17 120.5 2.3 93 382-482 3-103 (103)
57 3pdd_A Glycoside hydrolase, fa 95.1 2.5 8.5E-05 42.4 21.0 117 921-1061 59-180 (190)
58 3pdd_A Glycoside hydrolase, fa 94.2 1.1 3.7E-05 45.1 15.7 116 116-257 60-180 (190)
59 3rb5_A Na/Ca exchange protein; 93.6 2.3 8E-05 45.8 17.9 188 480-683 6-210 (298)
60 2yhg_A SDE_182CT, cellulose-bi 91.9 1.1 3.6E-05 50.6 12.4 95 955-1059 329-436 (437)
61 3rb5_A Na/Ca exchange protein; 85.2 27 0.00092 37.4 17.4 188 850-1060 6-211 (298)
62 1op4_A Neural-cadherin; beta s 84.4 4.6 0.00016 38.8 9.5 80 153-237 31-110 (159)
63 2kpn_A Bacillolysin; solution 83.3 3 0.0001 37.0 7.2 85 850-961 7-91 (103)
64 1op4_A Neural-cadherin; beta s 80.4 7 0.00024 37.5 9.2 80 587-671 31-110 (159)
65 2kpn_A Bacillolysin; solution 79.5 3.6 0.00012 36.5 6.3 84 152-262 7-90 (103)
66 2yhg_A SDE_182CT, cellulose-bi 78.0 11 0.00038 42.4 11.2 66 405-476 366-436 (437)
67 3pe9_A Fibronectin(III)-like m 72.4 31 0.0011 30.1 10.4 71 174-257 17-88 (98)
68 2yrl_A KIAA1837 protein; PKD d 71.5 14 0.00048 32.6 8.2 74 983-1064 24-98 (102)
69 3pe9_A Fibronectin(III)-like m 70.0 30 0.001 30.2 9.8 71 872-955 17-88 (98)
70 3us9_A Sodium/calcium exchange 63.0 1.6E+02 0.0055 31.3 21.4 181 486-683 14-229 (295)
71 2yrl_A KIAA1837 protein; PKD d 56.9 16 0.00055 32.2 5.6 32 223-260 67-98 (102)
72 3gin_A Sodium/calcium exchange 53.8 60 0.002 31.2 9.5 75 945-1024 8-83 (160)
73 3ead_A Na/Ca exchange protein; 48.4 1E+02 0.0036 28.5 10.2 117 958-1084 2-133 (137)
74 2y72_A Collagenase, collagenas 43.3 29 0.001 29.3 4.9 31 220-256 54-84 (85)
75 3ead_A Na/Ca exchange protein; 42.8 1.3E+02 0.0046 27.7 9.9 38 755-795 11-48 (137)
76 3gin_A Sodium/calcium exchange 37.0 90 0.0031 29.9 7.8 101 141-257 9-113 (160)
77 2y72_A Collagenase, collagenas 33.1 58 0.002 27.3 5.2 32 917-954 53-84 (85)
78 2c4x_A Endoglucanase, ctcel9D- 30.9 4.7E+02 0.016 27.1 13.4 34 442-479 63-96 (260)
79 1u2c_A Dystroglycan; IG-like d 26.5 1.5E+02 0.005 30.4 7.5 66 998-1065 33-103 (246)
80 1u2c_A Dystroglycan; IG-like d 24.7 3.4E+02 0.012 27.7 9.8 56 900-958 47-104 (246)
81 2c4x_A Endoglucanase, ctcel9D- 22.1 4.6E+02 0.016 27.1 10.6 33 814-848 63-95 (260)
No 1
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=6.1e-89 Score=859.29 Aligned_cols=617 Identities=21% Similarity=0.280 Sum_probs=444.9
Q ss_pred EEEEEEeccCCCCCCCccCCcEEEEEe-CCCCCCceEEEEEEeeCCCCCCceEEEEEEeCCCCCcEEEECCccEEEEcee
Q psy1041 363 KATQVHLVDLNDNKPVFDREIYEVDVP-ETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVT 441 (1095)
Q Consensus 363 ~~~~i~v~d~Nd~~P~F~~~~~~~~v~-E~~~~g~~v~~v~a~D~D~g~n~~i~ysi~~~~~~~~F~Id~~tG~i~~~~~ 441 (1095)
+...+.+.|+|||+|+|.+..|.+.|+ |+.++|+.|++|+|+|.|. |+.++|++. .+.|.|++ +|.|+++++
T Consensus 21 q~~~~~~~d~ndn~P~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D~--n~~i~Y~~~----~~~F~Id~-~G~i~~~~~ 93 (880)
T 1q55_A 21 QVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCTT--RKHGLYDVG----DSRFRVLP-DGTVLVKRH 93 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hheeeecccccCCCCccCCCeEEEEechhhCCCCCEEEEEEEEeCCC--CceEEEEeC----CCCEEECC-CceEEECCc
Confidence 456677899999999999999999999 9999999999999999983 778999984 34899998 799999999
Q ss_pred cCcccccEEEEEEEEEeCCCCCCceeeeEEEEEE-Eeec----------CCCCCcccCCcc------------EEEEeec
Q psy1041 442 LDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVN-IVDT----------NDNDPLFDSPEM------------EVSINEN 498 (1095)
Q Consensus 442 LD~E~~~~y~l~V~a~D~g~~~~~~~~~~~v~I~-V~Dv----------NDn~P~f~~~~~------------~~~V~E~ 498 (1095)
||||.. |.|+|+|+|++.+ ...+.|.|. |.+. |+++|.|....| .++|+||
T Consensus 94 Ld~e~~--~~l~V~A~D~~~~----~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En 167 (880)
T 1q55_A 94 VKLHKD--TKFTISTWDARGI----KHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSEN 167 (880)
T ss_dssp --------------------------------------------------------------------CCCCCCEEEESS
T ss_pred cccccc--eEEEEEEEcCCCC----eEEEEEEEEEecccccccccccccccCcccccccccccceeeccccccceEEeCC
Confidence 999987 9999999998632 344556666 3332 556789987643 5899999
Q ss_pred CC--CCcEEEEEEEeeCCCCCCceEEEEEecCCC-----CCcEEecccceEEEceeccccccccEEEEEEEEEECCcCCc
Q psy1041 499 EP--AGTSVIKVTAKDKDSGENAYISYSIANLKP-----VPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYR 571 (1095)
Q Consensus 499 ~~--~gt~v~~v~A~D~D~g~n~~i~ysi~~~~~-----~~F~Id~~tG~i~~~~~lD~E~~~~~~~l~V~a~D~g~p~~ 571 (1095)
.+ .+..++++.+ |.| .++.++|+|.+... +.|.|++.+|.|++.+.||||. ...|.|+|+|+|+|+|.
T Consensus 168 ~~~~~~~~v~~v~~-d~d--~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~-~~~y~l~v~A~D~g~~~- 242 (880)
T 1q55_A 168 ERGPFPKRLVQIKS-NKD--RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE-YDKYVLSSHAVSENGSP- 242 (880)
T ss_dssp CCSSSCEEEEECCC-SGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTT-CCEEEEEEEEEESSSCB-
T ss_pred CCCCCCeEEEEEee-CCC--CCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccc-cCccEEEEEEEECCCCc-
Confidence 97 4667777764 444 68899999987542 4799999999999999999998 57999999999998765
Q ss_pred eeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCC-----CeEEEEEEeCC----CCCcEEEeC
Q psy1041 572 RQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG-----NIISYRIVSGN----EDGCFALDI 642 (1095)
Q Consensus 572 ~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~-----~~i~y~i~~~~----~~~~F~Id~ 642 (1095)
++..+.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.+ ..++|+|.+++ ..+.|.|++
T Consensus 243 ~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~ 322 (880)
T 1q55_A 243 VEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINR 322 (880)
T ss_dssp CSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECT
T ss_pred eeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEcc
Confidence 356689999999999999999999999999999999999999999999998 37999999876 457999999
Q ss_pred CCcEEEEe-eccCcccccEEEEEEEEecCCCcc--ceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhh
Q psy1041 643 TSGVLSIA-CDLTDVRVNEREINVTATDSAHFS--DVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLA 719 (1095)
Q Consensus 643 ~tG~i~~~-~~ld~~~~~~~~l~V~atD~~~~s--~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~ 719 (1095)
.||.|++. +.||+|....|.|+|.|+|++++. ..+.++|
T Consensus 323 ~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I-------------------------------------- 364 (880)
T 1q55_A 323 ETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII-------------------------------------- 364 (880)
T ss_dssp TTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEE--------------------------------------
T ss_pred CCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEE--------------------------------------
Confidence 99999995 789999999999999999987543 3333333
Q ss_pred hhhhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCC--CCCCcEEEEEEEeCCCCC
Q psy1041 720 AAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRD--LGYNGKLVFGISSGDNDS 797 (1095)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D--~g~n~~v~y~i~~g~~~~ 797 (1095)
.|.|+|||+|.|....|.+.|+|+ +.|+.|++|.|+|+| .|.|+.++|+|.+ +..+
T Consensus 365 --------------------~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~ 422 (880)
T 1q55_A 365 --------------------QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGG 422 (880)
T ss_dssp --------------------EEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTS
T ss_pred --------------------EEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCc
Confidence 468999999999999999999999 999999999999999 7889999999988 7778
Q ss_pred cEEEe--C--CceEEEEcccCCccCCCEEEEEEEEEECC---CCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCC
Q psy1041 798 VFRID--P--DSGELKVVGYLDRERTSEYTLNITVYDLG---KPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENAL 870 (1095)
Q Consensus 798 ~F~Id--~--~tG~i~~~~~LD~E~~~~y~l~V~a~D~g---~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~ 870 (1095)
+|.|+ + .+|.|++.++||||....|.|+|+|+|++ .|.++++++|+|+|.|+|| +|+|.+..|.+.|+||.+
T Consensus 423 ~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~ 501 (880)
T 1q55_A 423 FFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLS 501 (880)
T ss_dssp CEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCC
T ss_pred eEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCC
Confidence 99995 3 57999999999999999999999999987 3567899999999999999 999999999999999999
Q ss_pred CCeEEEEEEEEeCCCCCCceEEEEecCCC-cceEEeCCcceEEEccccccccc----CeeEEEEEEEeCCCCCCCcceeE
Q psy1041 871 NGTVIFKVNATDLDLGDNAKVVYSLMTDT-QDFAVDSATGSLYVSASLDRERQ----DLYELKIRASDCDGRNDMYTLHA 945 (1095)
Q Consensus 871 ~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~-~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~A~D~~g~~~~~~~~~ 945 (1095)
+|+.|++|+|+|+|.|.|+.++|+|.++. ++|.||+.+|.|++.++||||.. ..|+|+|.|+|++ .+++++
T Consensus 502 ~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g----~p~~ss 577 (880)
T 1q55_A 502 RGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDG----VSVGTG 577 (880)
T ss_dssp SSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECS----SSCCCC
T ss_pred CCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEECC----CCCcEe
Confidence 99999999999999999999999998764 89999999999999999999997 8999999999998 567899
Q ss_pred EEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCce-EEEEEEeCCCCCCCEEE--eCCceEEE
Q psy1041 946 DALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGV-VRYTIVSDNEADDVFSI--DRLTGTIR 1022 (1095)
Q Consensus 946 ~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-v~Y~i~~~~~~~~~F~I--d~~tG~i~ 1022 (1095)
+++|+|+|.|+|||+|+|... ...|.|+.+.|+ + |.|+|+|.|.|+. ++|+|..+. ...|.| +..+|.|+
T Consensus 578 t~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~-v--v~A~D~D~~~n~~~~~ysl~~~~--~~~f~i~~~g~~~~l~ 650 (880)
T 1q55_A 578 TGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS--DLTWKAELDSKGTSML 650 (880)
T ss_dssp CEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS--SSSCBCCBCTTSSEEE
T ss_pred EEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCe-E--EEEecCCCCCCCceEEEEECCCC--CCCeEEEcccceeEEE
Confidence 999999999999999999844 678999999997 3 9999999999986 899998732 457887 44455776
Q ss_pred EcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCeeecc
Q psy1041 1023 VAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDF 1074 (1095)
Q Consensus 1023 ~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P~F~~~ 1074 (1095)
+. .+|+|..+.|.|.|.|+|+|. ++++++|+|+|.|+||| +|.|...
T Consensus 651 ~~-~~d~~~~~~y~l~V~a~D~g~--lsst~tv~V~V~d~nd~--~~~~~~~ 697 (880)
T 1q55_A 651 LS-PTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVCSCEGK--AIKCQEK 697 (880)
T ss_dssp EB-CSSCCCSSCBCCEEECCSSSC--CCEEEECCEEECSCSSS--CCCCC--
T ss_pred ec-cCccccCCEEEEEEEEEECCc--ceeeEEEEEEEEecCCC--ccccccc
Confidence 54 558999999999999999998 89999999999999997 7888654
No 2
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=6e-87 Score=841.15 Aligned_cols=622 Identities=23% Similarity=0.311 Sum_probs=427.3
Q ss_pred EEEEEecCCCCCCCCCCCceEEEee-CCCCCCcEEEEEEeeeCCCCCCeEEEEEEecCCccEEEEccccEEEEccCCCcC
Q psy1041 144 VHVNVLDTNDLNPLFYPTEYEETVP-EDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYT 222 (1095)
Q Consensus 144 v~I~V~D~NDn~P~F~~~~y~~~v~-E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~~~~~F~id~~tG~i~~~~~ld~e 222 (1095)
..+.+.|+|||+|+|.+..|.++|+ |++++|+.|++|+|+|.| .|+.++|++. ...|.|++ +|.|+++++||||
T Consensus 23 ~~~~~~d~ndn~P~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D--~n~~i~Y~~~--~~~F~Id~-~G~i~~~~~Ld~e 97 (880)
T 1q55_A 23 VPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCT--TRKHGLYDVG--DSRFRVLP-DGTVLVKRHVKLH 97 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecccccCCCCccCCCeEEEEechhhCCCCCEEEEEEEEeCC--CCceEEEEeC--CCCEEECC-CceEEECCccccc
Confidence 3446789999999999999999999 999999999999999999 5788999986 45899998 7999999999999
Q ss_pred CCcEEEEEEEEeecCccccCCCCcceEEEEEE-EEec----------cCCcCeeEEeec------------C-cccccCC
Q psy1041 223 DRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIK-VEQI----------NLYGPEIYVQSL------------P-DIVEQSY 278 (1095)
Q Consensus 223 ~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~-V~dv----------Nd~~P~f~~~~~------------~-~~~~~~~ 278 (1095)
.. |.|+|+|+|+|. ...++.|.|. |.+. |+++|.|....+ . .+.|+..
T Consensus 98 ~~--~~l~V~A~D~~~------~~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~ 169 (880)
T 1q55_A 98 KD--TKFTISTWDARG------IKHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENER 169 (880)
T ss_dssp ------------------------------------------------------------------CCCCCCEEEESSCC
T ss_pred cc--eEEEEEEEcCCC------CeEEEEEEEEEecccccccccccccccCcccccccccccceeeccccccceEEeCCCC
Confidence 87 999999999873 3455666666 4332 456788865432 1 2233332
Q ss_pred ccEEEEEEEEeCCCCCCCeEEEEEeecCC----CCCCeEEeeeccCCCCcCceEEEEECccccccCCCCceEEEEEEEEC
Q psy1041 279 ADIYAIVRVVDRDAGIHGEIASLDIVDGD----PDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDK 354 (1095)
Q Consensus 279 ~~~~~~v~a~D~D~g~n~~v~~~~i~~g~----~~~~F~i~~~~~~~~~~~g~~~i~~~~~lD~E~~~~~y~l~v~a~D~ 354 (1095)
......+...+.|.+.|+.+. |+|..++ +.+.|.|++. +| .|.+.++||||.... |.|+|+|+|+
T Consensus 170 ~~~~~~v~~v~~d~d~~~~v~-Ysi~~~~~~~~~~~~F~Id~~-------tG--~l~~~~~LDrE~~~~-y~l~v~A~D~ 238 (880)
T 1q55_A 170 GPFPKRLVQIKSNKDRFNKVY-YSITGQGADNPPQGVFRIEWE-------TG--WMLVTRPLDREEYDK-YVLSSHAVSE 238 (880)
T ss_dssp SSSCEEEEECCCSGGGSSCEE-EEEEEBTTTBSSTTSEEECTT-------TC--EEEECSCCCTTTCCE-EEEEEEEEES
T ss_pred CCCCeEEEEEeeCCCCCceEE-EEEECCCCCCCcCCEEEEECC-------cC--EEEECCccCccccCc-cEEEEEEEEC
Confidence 111122222334555778887 5777653 3468999976 56 588899999999876 9999999999
Q ss_pred CCCCeeeEEEEEEEeccCCCCCCCccCCcEEEEEeCCCCCCceEEEEEEeeCCCC---CCceEEEEEEeCC----CCCcE
Q psy1041 355 GTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDG---KNAQVFLEIVGGN----EGGEF 427 (1095)
Q Consensus 355 g~p~~~s~~~~~i~v~d~Nd~~P~F~~~~~~~~v~E~~~~g~~v~~v~a~D~D~g---~n~~i~ysi~~~~----~~~~F 427 (1095)
|++++++...++|.|.|+|||+|+|.+..|.++|+|++++|+.|++|+|+|+|.| .|+.++|+|.+++ ..+.|
T Consensus 239 g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F 318 (880)
T 1q55_A 239 NGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLF 318 (880)
T ss_dssp SSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSE
T ss_pred CCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeE
Confidence 9888877789999999999999999999999999999999999999999999998 6899999998765 35799
Q ss_pred EEECCccEEEEc-eecCcccccEEEEEEEEEeCCCCCCceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEE
Q psy1041 428 NINPETGMLYTA-VTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVI 506 (1095)
Q Consensus 428 ~Id~~tG~i~~~-~~LD~E~~~~y~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~ 506 (1095)
.|++.||.|++. +.||||....|.|+|+|+|+|.+ +++++++|+|+|+|+|||+|+|....|.++|+|| ++|+.|+
T Consensus 319 ~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~--~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~ 395 (880)
T 1q55_A 319 TINRETGVISLIGTGLDREKFPEYTLTVQATDLEGA--GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQ 395 (880)
T ss_dssp EECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHT--SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEE
T ss_pred EEccCCccEEEecccCCHHHcceeEEEEEEEECCCC--CccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEE
Confidence 999999999995 78999999999999999999855 4789999999999999999999999999999999 9999999
Q ss_pred EEEEeeCC--CCCCceEEEEEecCCCCCcEEe--c--ccceEEEceeccccccccEEEEEEEEEECCcC--CceeeEEEE
Q psy1041 507 KVTAKDKD--SGENAYISYSIANLKPVPFEID--H--FSGVIKTTQVLDYESMRREYILRVRASDWGLP--YRRQTEMQL 578 (1095)
Q Consensus 507 ~v~A~D~D--~g~n~~i~ysi~~~~~~~F~Id--~--~tG~i~~~~~lD~E~~~~~~~l~V~a~D~g~p--~~~s~~~~v 578 (1095)
++.|+|+| .|.|+.++|+|.+...+.|.|+ + .+|.|++.++||||. ...|.|+|+|+|++.. +.++++++|
T Consensus 396 ~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~-~~~y~l~V~A~D~~~~~~~~~sst~tV 474 (880)
T 1q55_A 396 RLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFEL-RKQYVLQITVENAEPFSVPLPTSTATV 474 (880)
T ss_dssp EECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSS-CCCEEEEECCEESSCCSSCCCCCCEEE
T ss_pred EEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCccc-CCcEEEEEEEEECCCCCCCCcceeEEE
Confidence 99999999 7889999999988456789995 3 589999999999998 5789999999998631 134677999
Q ss_pred EEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCcEEEeCCCcEEEEeeccCcccc
Q psy1041 579 KIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRV 658 (1095)
Q Consensus 579 ~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~~~i~y~i~~~~~~~~F~Id~~tG~i~~~~~ld~~~~ 658 (1095)
+|+|.|+|| +|.|.+..|...|+|++++|
T Consensus 475 ~I~V~DvND-~P~f~~~~y~~~V~En~~~G-------------------------------------------------- 503 (880)
T 1q55_A 475 TVTVEDVNE-APFFVPAVSRVDVSEDLSRG-------------------------------------------------- 503 (880)
T ss_dssp EEEEECCCC-CCEESSCEECCCBCTTCCSS--------------------------------------------------
T ss_pred EEEEEeCCC-CCEEecCceEEEEeCCCCCC--------------------------------------------------
Confidence 999999999 99998776655555555544
Q ss_pred cEEEEEEEEecCCCccceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhhhhhhcccccccccceeeec
Q psy1041 659 NEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMM 738 (1095)
Q Consensus 659 ~~~~l~V~atD~~~~s~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 738 (1095)
T Consensus 504 -------------------------------------------------------------------------------- 503 (880)
T 1q55_A 504 -------------------------------------------------------------------------------- 503 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccC
Q psy1041 739 PSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRER 818 (1095)
Q Consensus 739 ~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~ 818 (1095)
+.|++|.|+|+|.|.|+.++|+|..+ ..++|.|++.+|.|++.++||||.
T Consensus 504 -----------------------------t~V~~v~A~D~D~g~n~~v~Ysi~~~-~~~~F~Id~~tG~I~~~~~LDrE~ 553 (880)
T 1q55_A 504 -----------------------------EKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLDRES 553 (880)
T ss_dssp -----------------------------EEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCCTTS
T ss_pred -----------------------------CEEEEEEEEeCCCCCCCcEEEEECCC-CCCCEEEeCCccEEEECCccCccc
Confidence 44555555555555567777777653 457899999999999999999999
Q ss_pred C----CEEEEEEEEEECCCCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCce-EEE
Q psy1041 819 T----SEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAK-VVY 893 (1095)
Q Consensus 819 ~----~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~~-v~Y 893 (1095)
. ..|.|+|+|+|.|.|+++++++|.|+|.|+|||+|+|.+. ...|.|+.+.|+ + |.|+|+|.+.|+. ++|
T Consensus 554 ~~~~~~~y~l~V~A~D~g~p~~sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~-v--v~A~D~D~~~n~~~~~y 628 (880)
T 1q55_A 554 EYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKV 628 (880)
T ss_dssp SSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCC
T ss_pred ccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCe-E--EEEecCCCCCCCceEEE
Confidence 7 8999999999999999999999999999999999999854 688999999998 3 9999999999987 899
Q ss_pred EecCCC-cceEE--eCCcceEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecC
Q psy1041 894 SLMTDT-QDFAV--DSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALP 966 (1095)
Q Consensus 894 sl~~~~-~~F~I--d~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~ 966 (1095)
+|.++. ..|.| +..+|.|.+ +.+|+|....|.|.|+|+|+++ ++++++|+|+|.|+|||+|.|...
T Consensus 629 sl~~~~~~~f~i~~~g~~~~l~~-~~~d~~~~~~y~l~V~a~D~g~------lsst~tv~V~V~d~nd~~~~~~~~ 697 (880)
T 1q55_A 629 SLSHGSDLTWKAELDSKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN------NPQLTVVNATVCSCEGKAIKCQEK 697 (880)
T ss_dssp BCCSCSSSSCBCCBCTTSSEEEE-BCSSCCCSSCBCCEEECCSSSC------CCEEEECCEEECSCSSSCCCCC--
T ss_pred EECCCCCCCeEEEcccceeEEEe-ccCccccCCEEEEEEEEEECCc------ceeeEEEEEEEEecCCCccccccc
Confidence 998764 68887 444456655 4568999999999999999983 789999999999999999998754
No 3
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=2.6e-77 Score=723.95 Aligned_cols=503 Identities=24% Similarity=0.350 Sum_probs=447.6
Q ss_pred EEEEeecCCCCcEEEEEEEeeCCCCCCceEEEEEecCCC-----CCcEEecccceEEEceeccccccccEEEEEEEEEEC
Q psy1041 492 EVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKP-----VPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDW 566 (1095)
Q Consensus 492 ~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~ysi~~~~~-----~~F~Id~~tG~i~~~~~lD~E~~~~~~~l~V~a~D~ 566 (1095)
.++|+||.+ |.....+.+.+.|.+.|+.++|+|.+... +.|.|++.+|.|++.+.||||. ...|.|+|+|+|+
T Consensus 6 ~~~v~En~~-g~~~~~i~~~~~D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~-~~~y~l~v~a~D~ 83 (559)
T 3q2w_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREL-IARFHLRAHAVDI 83 (559)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTT-CSEEEEEEEEEET
T ss_pred cEEeeCCCC-CCCCeEEEEEeeCCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCC-CceEEEEEEEEEC
Confidence 478999997 88888888888998889999999997543 5899999999999999999998 5789999999999
Q ss_pred CcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCC----CeEEEEEEeCCCC----CcE
Q psy1041 567 GLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG----NIISYRIVSGNED----GCF 638 (1095)
Q Consensus 567 g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~----~~i~y~i~~~~~~----~~F 638 (1095)
|+|. ++..+.|+|+|+|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.+ ..++|+|.+++.. +.|
T Consensus 84 g~~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F 162 (559)
T 3q2w_A 84 NGNQ-VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMF 162 (559)
T ss_dssp TSCE-EEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCE
T ss_pred CCCc-cceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceE
Confidence 8875 567789999999999999999999999999999999999999999999986 2699999876543 689
Q ss_pred EEeCCCcEEEEee-ccCcccccEEEEEEEEecCCC-----ccceEEEEEEEeecccCCCCCccccCCCCCeEEeecccee
Q psy1041 639 ALDITSGVLSIAC-DLTDVRVNEREINVTATDSAH-----FSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVAR 712 (1095)
Q Consensus 639 ~Id~~tG~i~~~~-~ld~~~~~~~~l~V~atD~~~-----~s~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 712 (1095)
.|++.+|+|++.+ .||||....|.|.|+|+|+++ .+..+.+.|
T Consensus 163 ~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I------------------------------- 211 (559)
T 3q2w_A 163 TINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVI------------------------------- 211 (559)
T ss_dssp EECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEE-------------------------------
T ss_pred EEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEE-------------------------------
Confidence 9999999999988 999999999999999999754 334444444
Q ss_pred eeehhhhhhhhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCCCCC--CcEEEEEE
Q psy1041 713 RLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGY--NGKLVFGI 790 (1095)
Q Consensus 713 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~--n~~v~y~i 790 (1095)
.|.|+|||+|.|....|.+.|+|+. .|+.|+++.|+|+|.|. |+.++|+|
T Consensus 212 ---------------------------~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i 263 (559)
T 3q2w_A 212 ---------------------------TVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRI 263 (559)
T ss_dssp ---------------------------EEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEE
T ss_pred ---------------------------EEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEE
Confidence 4689999999999999999999997 89999999999999976 67899999
Q ss_pred EeCCCCCcEEE----eCCceEEEEcccCCccCCCEEEEEEEEEECC------CCCCceeEEEEEEEEecCCCCCcccccc
Q psy1041 791 SSGDNDSVFRI----DPDSGELKVVGYLDRERTSEYTLNITVYDLG------KPQKSTSKMLPITILDVNDNPPKFEKSL 860 (1095)
Q Consensus 791 ~~g~~~~~F~I----d~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g------~p~~s~~~~v~I~V~DvNDn~P~F~~~~ 860 (1095)
.+++..+.|.| ++.+|.|++.++||||....|.|+|+|+|.| .|+++++++|.|.|.|+|| +|.|.+..
T Consensus 264 ~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~ 342 (559)
T 3q2w_A 264 SGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNP 342 (559)
T ss_dssp EESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSE
T ss_pred ecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccc
Confidence 99998899999 5789999999999999999999999999974 3678999999999999999 69999999
Q ss_pred eEEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC-cceEEeCCcceEEEccccccccc----CeeEEEEEEEeCC
Q psy1041 861 ASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDT-QDFAVDSATGSLYVSASLDRERQ----DLYELKIRASDCD 935 (1095)
Q Consensus 861 y~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~-~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~A~D~~ 935 (1095)
|.+.|+|+.+.|+.|++|+|+|+|.|.|+.++|+|.++. .+|.|++.+|.|++.+.||||.. ..|.|+|+|+|++
T Consensus 343 ~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g 422 (559)
T 3q2w_A 343 KIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNG 422 (559)
T ss_dssp EEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECS
T ss_pred eEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCC
Confidence 999999999999999999999999999999999998764 89999999999999999999976 8999999999998
Q ss_pred CCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCc-eEEEEEEeCC-CCCCCEE
Q psy1041 936 GRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGG-VVRYTIVSDN-EADDVFS 1013 (1095)
Q Consensus 936 g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~-~v~Y~i~~~~-~~~~~F~ 1013 (1095)
.|+++++++|+|+|.|+|||+|.|....| .+.|+ .+..+++|.|+|+|.|.|+ .++|+|.... +..+.|+
T Consensus 423 ----~p~~ss~~~v~I~V~DvNDn~P~f~~~~~--~v~e~--~~~~v~~v~A~D~D~~~n~~~~~ysl~~~~~~~~~~f~ 494 (559)
T 3q2w_A 423 ----IPPMSGTGTLQIYLLDINDNAPQVLPQEA--ETCET--PEPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWT 494 (559)
T ss_dssp ----SSCCEEEEEEEEEEECCSCCCCEESCTTC--CCCSC--CCTTCEEECEECSCCTTSSSSCEEECCSSSHHHHHHEE
T ss_pred ----CCcceEEEEEEEEEEEccCCCCcccCCce--EEeec--CCCcEEEEEEEcCCCCCCCCCEEEEEcCCCCccCCCeE
Confidence 56799999999999999999999987655 46788 4555789999999999887 8999998521 1256899
Q ss_pred EeCCceEEEEc-ccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCC
Q psy1041 1014 IDRLTGTIRVA-KPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNEN 1065 (1095)
Q Consensus 1014 Id~~tG~i~~~-~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn 1065 (1095)
|++.+|.+.+. ..++++....|.|.|.|+|+|.|+++++++|+|.|.|+||+
T Consensus 495 i~~~~G~~~~~~~~~~~~~~~~~~l~V~~~D~g~P~lsst~tv~V~V~d~n~~ 547 (559)
T 3q2w_A 495 INRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKVCQCDSN 547 (559)
T ss_dssp EEECSSSCEEEEECSCC-CCEEEEEEEEEECSSSSCCEEEEEEEEEEC-----
T ss_pred EEecCCCEEEEEeccCcccCcEEEEEEEEEECCCCccceeEEEEEEEEeCCCC
Confidence 99999987655 47899999999999999999999999999999999999995
No 4
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=8.2e-77 Score=719.57 Aligned_cols=507 Identities=25% Similarity=0.359 Sum_probs=446.0
Q ss_pred EEEEeCCCCCCceEEEEEEeeCCCCCCceEEEEEEeCCC----CCcEEEECCccEEEEceecCcccccEEEEEEEEEeCC
Q psy1041 385 EVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNE----GGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQG 460 (1095)
Q Consensus 385 ~~~v~E~~~~g~~v~~v~a~D~D~g~n~~i~ysi~~~~~----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g 460 (1095)
.++|+||.+ |.....+.+.+.|.+.|+.++|+|.++.. .+.|.|++.||+|++.++||||+...|.|+|+|+|+|
T Consensus 6 ~~~v~En~~-g~~~~~i~~~~~D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g 84 (559)
T 3q2w_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (559)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEeeCCCC-CCCCeEEEEEeeCCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECC
Confidence 368999997 77777788888888889999999987543 3799999999999999999999999999999999998
Q ss_pred CCCCceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEEEEEEeeCCCC--CCceEEEEEecCCC-----CCc
Q psy1041 461 NAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSG--ENAYISYSIANLKP-----VPF 533 (1095)
Q Consensus 461 ~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g--~n~~i~ysi~~~~~-----~~F 533 (1095)
.+ .+++++.|.|+|+|+|||+|+|.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+|.++.+ +.|
T Consensus 85 ~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F 162 (559)
T 3q2w_A 85 GN--QVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMF 162 (559)
T ss_dssp SC--EEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCE
T ss_pred CC--ccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceE
Confidence 54 4788899999999999999999999999999999999999999999999987 69999999986543 679
Q ss_pred EEecccceEEEce-eccccccccEEEEEEEEEECCc-C-CceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcE
Q psy1041 534 EIDHFSGVIKTTQ-VLDYESMRREYILRVRASDWGL-P-YRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGRE 610 (1095)
Q Consensus 534 ~Id~~tG~i~~~~-~lD~E~~~~~~~l~V~a~D~g~-p-~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~ 610 (1095)
.|++.+|.|.+.+ .||||. ...|.|+|+|+|+|+ | +.++++++|+|+|+|+|||+|.|.+..|...|+|+. +|+.
T Consensus 163 ~Id~~tG~i~~~~~~LD~E~-~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~ 240 (559)
T 3q2w_A 163 TINNETGDIITVAAGLDREK-VQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVI 240 (559)
T ss_dssp EECTTTCEEEECCSCCCTTT-CCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEE
T ss_pred EEeCCceEEEEEeccCCccc-CCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcE
Confidence 9999999999987 999998 578999999999865 2 246788999999999999999999999999999997 8999
Q ss_pred EEEEEEEeCCCCC----eEEEEEEeCCCCCcEEE----eCCCcEEEEeeccCcccccEEEEEEEEecCCC--------cc
Q psy1041 611 IITLSAIDFDAGN----IISYRIVSGNEDGCFAL----DITSGVLSIACDLTDVRVNEREINVTATDSAH--------FS 674 (1095)
Q Consensus 611 v~~v~A~D~D~~~----~i~y~i~~~~~~~~F~I----d~~tG~i~~~~~ld~~~~~~~~l~V~atD~~~--------~s 674 (1095)
|+++.|+|+|.+. .++|+|..++..+.|.| +..+|.|++.++||||....|.|+|.|+|++. .+
T Consensus 241 v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~ 320 (559)
T 3q2w_A 241 VANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQ 320 (559)
T ss_dssp EEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGG
T ss_pred EEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCc
Confidence 9999999999874 59999999998899999 57899999999999999999999999999753 23
Q ss_pred ceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhhhhhhcccccccccceeeeccccccccCCCCccccC
Q psy1041 675 DVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSF 754 (1095)
Q Consensus 675 ~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~ 754 (1095)
..+.++| .|.|+|| +|.|...
T Consensus 321 s~~~v~I----------------------------------------------------------~V~DvND-~P~f~~~ 341 (559)
T 3q2w_A 321 STATVSV----------------------------------------------------------TVIDVNE-NPYFAPN 341 (559)
T ss_dssp GEEEEEE----------------------------------------------------------EEECCCC-CCEESSS
T ss_pred eEEEEEE----------------------------------------------------------EEEeCCC-CCccccc
Confidence 4444444 4679999 6999999
Q ss_pred cEEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCC----CEEEEEEEEEE
Q psy1041 755 PIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERT----SEYTLNITVYD 830 (1095)
Q Consensus 755 ~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~a~D 830 (1095)
.|.+.|.|+.+.|+.|++|.|+|+|.|.|+.++|+|.++ ..++|.|++.+|.|++.+.||||.. ..|.|+|+|+|
T Consensus 342 ~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~-~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D 420 (559)
T 3q2w_A 342 PKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSD-PANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASD 420 (559)
T ss_dssp EEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEEC-TTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEE
T ss_pred ceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccC-CccceEecCCceEEEEccccCcccccccCCEEEEEEEEEc
Confidence 999999999999999999999999999999999999864 5689999999999999999999986 89999999999
Q ss_pred CCCCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCc-eEEEEecCC----CcceEEe
Q psy1041 831 LGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNA-KVVYSLMTD----TQDFAVD 905 (1095)
Q Consensus 831 ~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~-~v~Ysl~~~----~~~F~Id 905 (1095)
+|.|+++++++|.|.|.|+|||+|.|.+..| .+.|+ .+..+++|+|+|+|.+.|+ .++|+|... .+.|.|+
T Consensus 421 ~g~p~~ss~~~v~I~V~DvNDn~P~f~~~~~--~v~e~--~~~~v~~v~A~D~D~~~n~~~~~ysl~~~~~~~~~~f~i~ 496 (559)
T 3q2w_A 421 NGIPPMSGTGTLQIYLLDINDNAPQVLPQEA--ETCET--PEPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTIN 496 (559)
T ss_dssp CSSSCCEEEEEEEEEEECCSCCCCEESCTTC--CCCSC--CCTTCEEECEECSCCTTSSSSCEEECCSSSHHHHHHEEEE
T ss_pred CCCCcceEEEEEEEEEEEccCCCCcccCCce--EEeec--CCCcEEEEEEEcCCCCCCCCCEEEEEcCCCCccCCCeEEE
Confidence 9999999999999999999999999986654 57898 3445789999999999887 799999864 3689999
Q ss_pred CCcceEEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeee
Q psy1041 906 SATGSLYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFA 964 (1095)
Q Consensus 906 ~~tG~i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~ 964 (1095)
+.+|.+.+. ..++++....|.|.|+|+|++ .|+++++++|+|+|+|+||+++.+.
T Consensus 497 ~~~G~~~~~~~~~~~~~~~~~~l~V~~~D~g----~P~lsst~tv~V~V~d~n~~~~~~~ 552 (559)
T 3q2w_A 497 RLNGDFAQLNLKIKFLEAGIYEVPIIITDSG----NPPKSNISILRVKVCQCDSNGDCTD 552 (559)
T ss_dssp ECSSSCEEEEECSCC-CCEEEEEEEEEECSS----SSCCEEEEEEEEEEC----------
T ss_pred ecCCCEEEEEeccCcccCcEEEEEEEEEECC----CCccceeEEEEEEEEeCCCCCcccc
Confidence 999998654 478999999999999999998 5789999999999999999766554
No 5
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.5e-76 Score=713.96 Aligned_cols=502 Identities=26% Similarity=0.363 Sum_probs=440.1
Q ss_pred EEEeCCCC--CCceEEEEEEeeCCCCCCceEEEEEEeC----CCCCcEEEECCccEEEEceecCcccccEEEEEEEEEeC
Q psy1041 386 VDVPETTP--VNTPIIRLKVSDADDGKNAQVFLEIVGG----NEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQ 459 (1095)
Q Consensus 386 ~~v~E~~~--~g~~v~~v~a~D~D~g~n~~i~ysi~~~----~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 459 (1095)
++|+||.+ .+..|++++| |.|. ++.++|+|.+. +..+.|.|++.||.|++.++||||+...|.|+|+|+|+
T Consensus 7 ~~v~En~~~~~~~~v~~v~a-d~d~--~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~ 83 (550)
T 3q2v_A 7 ISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSS 83 (550)
T ss_dssp EEEETTCCSSSSEEEEECEE-GGGG--TSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred EEEeCCCCCCcCeEEEEEec-CCCC--CceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeC
Confidence 68999985 5678999998 7665 78999999873 33569999999999999999999999999999999998
Q ss_pred CCCCCceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEEEEEEeeCCCC---CCceEEEEEecCC-----CC
Q psy1041 460 GNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSG---ENAYISYSIANLK-----PV 531 (1095)
Q Consensus 460 g~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g---~n~~i~ysi~~~~-----~~ 531 (1095)
+.+ .++.++.|.|+|+|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+|.++. ..
T Consensus 84 ~~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~ 161 (550)
T 3q2v_A 84 NGE--AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 161 (550)
T ss_dssp TSC--BCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSC
T ss_pred CCC--cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCC
Confidence 744 3577889999999999999999999999999999999999999999999998 7999999998753 45
Q ss_pred CcEEecccceEEE-ceeccccccccEEEEEEEEEECCcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcE
Q psy1041 532 PFEIDHFSGVIKT-TQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGRE 610 (1095)
Q Consensus 532 ~F~Id~~tG~i~~-~~~lD~E~~~~~~~l~V~a~D~g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~ 610 (1095)
.|.|++.+|.|++ .+.||||. ...|.|+|+|+|+|+|. ++++++|+|+|+|+|||+|.|.+..|.+.|+|+ ++|+.
T Consensus 162 ~F~id~~tG~i~~~~~~LDrE~-~~~y~l~V~A~D~g~~~-~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~ 238 (550)
T 3q2v_A 162 MFTVNRDTGVISVLTSGLDRES-YPTYTLVVQAADLQGEG-LSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNAR 238 (550)
T ss_dssp SEEECTTTCEEEECSSCCCTTT-CSEEEEEEEEESGGGTS-CCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCC
T ss_pred ceEEcCCCeEEEEccCCCCccc-CcEEEEEEEEEcCCCCC-eeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCE
Confidence 8999999999998 57899998 57899999999998774 567899999999999999999999999999999 99999
Q ss_pred EEEEEEEeCCCCC----eEEEEEEeCCCCCcEEEe----CCCcEEEEeeccCcccccEEEEEEEEecCCC-----ccceE
Q psy1041 611 IITLSAIDFDAGN----IISYRIVSGNEDGCFALD----ITSGVLSIACDLTDVRVNEREINVTATDSAH-----FSDVV 677 (1095)
Q Consensus 611 v~~v~A~D~D~~~----~i~y~i~~~~~~~~F~Id----~~tG~i~~~~~ld~~~~~~~~l~V~atD~~~-----~s~~~ 677 (1095)
|++|.|+|+|.+. .++|+|.. +..+.|.|+ ..+|.|++.++||+|....|.|+|.|+|++. .+..+
T Consensus 239 v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~ 317 (550)
T 3q2v_A 239 IATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTA 317 (550)
T ss_dssp CEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEE
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEE
Confidence 9999999999885 47899987 777899998 7899999999999999999999999999874 23344
Q ss_pred EEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhhhhhhcccccccccceeeeccccccccCCCCccccCcEE
Q psy1041 678 RIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIE 757 (1095)
Q Consensus 678 ~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~ 757 (1095)
.+.| .|.|+|| +|.|....|.
T Consensus 318 ~v~I----------------------------------------------------------~V~DvND-~P~f~~~~~~ 338 (550)
T 3q2v_A 318 TVTV----------------------------------------------------------DVVDVNE-APIFMPAERR 338 (550)
T ss_dssp EEEE----------------------------------------------------------EEECCCC-CCEESSSSCE
T ss_pred EEEE----------------------------------------------------------EEEecCC-CCeEcCcceE
Confidence 4444 4689999 9999999999
Q ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCC-----CEEEEEEEEEECC
Q psy1041 758 LQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERT-----SEYTLNITVYDLG 832 (1095)
Q Consensus 758 ~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~-----~~y~l~V~a~D~g 832 (1095)
+.|+|+.+.|+.|+++.|+|+|.|.|+.++|+|.+ +..++|.|++.+|.|++.+.||||.. ..|.|+|+|+|+|
T Consensus 339 ~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~-~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g 417 (550)
T 3q2v_A 339 VEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWR-DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDG 417 (550)
T ss_dssp EEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEE-CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCS
T ss_pred EEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEec-CCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCC
Confidence 99999999999999999999999999999999965 45689999999999999999999998 9999999999999
Q ss_pred CCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCc-eEEEEecCCC-cceEEeC--Cc
Q psy1041 833 KPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNA-KVVYSLMTDT-QDFAVDS--AT 908 (1095)
Q Consensus 833 ~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~-~v~Ysl~~~~-~~F~Id~--~t 908 (1095)
.|+++++++|.|.|.|+|||+|+|.+ |...|.|+.+.|.. |+|+|+|.+.|+ .++|+|.++. ..|.|.. .+
T Consensus 418 ~p~~s~~~~v~I~V~DvNDn~P~~~~--~~~~v~e~~~~~~~---v~A~D~D~~~n~~~~~~~l~~~~~~~~~~~~~~~~ 492 (550)
T 3q2v_A 418 SPIATGTGTLLLVLLDVNDNAPIPEP--RNMQFCQRNPQPHI---ITILDPDLPPNTSPFTAELTHGASVNWTIEYNDAA 492 (550)
T ss_dssp SSCCCEEEEEEEEEECCCCCCCEESC--SSCEEESSSCCCEE---EEEECCSCTTSSSSCCCEEEECCSSSCEEECCSTT
T ss_pred CCcceeEEEEEEEEEeCCCCCCcCcC--cccceeecCCCcEE---EEEECCCCCCCCCCEEEEECCCCCCCeEEEEecCC
Confidence 99999999999999999999999974 67789999998865 999999999988 4889998765 4555554 45
Q ss_pred ceEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCc
Q psy1041 909 GSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPN 967 (1095)
Q Consensus 909 G~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~ 967 (1095)
|.+.....+++|..+.|.|.|+|+|+++ ++++++|+|+|+|+|||+|.+.+..
T Consensus 493 g~~~~~~~~~~~~~~~y~l~V~a~D~g~------lss~~tv~V~V~d~ndn~~~~~~~~ 545 (550)
T 3q2v_A 493 QESLILQPRKDLEIGEYKIHLKLADNQN------KDQVTTLDVHVCDCEGTVNNCMKAH 545 (550)
T ss_dssp SSEEEEECSCC----CEECEEECCSSSC------CCCBCCCEEEEECCCC---------
T ss_pred CcEEEEEecccCCCceEEEEEEEEECCc------ceeEEEEEEEEEEecCCCcchhhhh
Confidence 9998889999999999999999999984 7889999999999999999987653
No 6
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.1e-75 Score=708.24 Aligned_cols=502 Identities=24% Similarity=0.292 Sum_probs=439.3
Q ss_pred EEEEeecCC--CCcEEEEEEEeeCCCCCCceEEEEEecCC-----CCCcEEecccceEEEceeccccccccEEEEEEEEE
Q psy1041 492 EVSINENEP--AGTSVIKVTAKDKDSGENAYISYSIANLK-----PVPFEIDHFSGVIKTTQVLDYESMRREYILRVRAS 564 (1095)
Q Consensus 492 ~~~V~E~~~--~gt~v~~v~A~D~D~g~n~~i~ysi~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~l~V~a~ 564 (1095)
.++|+||.+ .++.|+++.| |.|. ++.++|+|.+.. .+.|.|++.+|.|++.++||||. ...|.|+|+|+
T Consensus 6 ~~~v~En~~~~~~~~v~~v~a-d~d~--~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~-~~~y~l~v~a~ 81 (550)
T 3q2v_A 6 PISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREA-IAKYILYSHAV 81 (550)
T ss_dssp CEEEETTCCSSSSEEEEECEE-GGGG--TSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTT-CSEEEEEEEEE
T ss_pred CEEEeCCCCCCcCeEEEEEec-CCCC--CceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCccc-CCeeEEEEEEE
Confidence 468999985 5788999999 7775 788999998743 24899999999999999999998 57899999999
Q ss_pred ECCcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCC-----CeEEEEEEeCC----CC
Q psy1041 565 DWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG-----NIISYRIVSGN----ED 635 (1095)
Q Consensus 565 D~g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~-----~~i~y~i~~~~----~~ 635 (1095)
|.+++. .+..+.|+|+|+|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| ..++|+|.+++ ..
T Consensus 82 d~~~~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~ 160 (550)
T 3q2v_A 82 SSNGEA-VEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHK 160 (550)
T ss_dssp ETTSCB-CSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSS
T ss_pred eCCCCc-ccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcC
Confidence 988764 345688999999999999999999999999999999999999999999998 27999998764 35
Q ss_pred CcEEEeCCCcEEEE-eeccCcccccEEEEEEEEecCCCc--cceEEEEEEEeecccCCCCCccccCCCCCeEEeecccee
Q psy1041 636 GCFALDITSGVLSI-ACDLTDVRVNEREINVTATDSAHF--SDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVAR 712 (1095)
Q Consensus 636 ~~F~Id~~tG~i~~-~~~ld~~~~~~~~l~V~atD~~~~--s~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 712 (1095)
+.|.|++.+|.|++ .+.||||....|.|+|+|+|+|+. +..+.+.|
T Consensus 161 ~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I------------------------------- 209 (550)
T 3q2v_A 161 NMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVI------------------------------- 209 (550)
T ss_dssp CSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEE-------------------------------
T ss_pred CceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEE-------------------------------
Confidence 69999999999998 578999999999999999997643 44444444
Q ss_pred eeehhhhhhhhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCCCCCCc--EEEEEE
Q psy1041 713 RLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNG--KLVFGI 790 (1095)
Q Consensus 713 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~--~v~y~i 790 (1095)
.|.|+|||+|.|.+..|.+.|.|+ +.|+.|+++.|+|+|.|.|+ .++|+|
T Consensus 210 ---------------------------~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi 261 (550)
T 3q2v_A 210 ---------------------------TVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTV 261 (550)
T ss_dssp ---------------------------EEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEE
T ss_pred ---------------------------EecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEE
Confidence 468999999999999999999999 99999999999999999887 467999
Q ss_pred EeCCCCCcEEEe----CCceEEEEcccCCccCCCEEEEEEEEEECC---CCCCceeEEEEEEEEecCCCCCcccccceEE
Q psy1041 791 SSGDNDSVFRID----PDSGELKVVGYLDRERTSEYTLNITVYDLG---KPQKSTSKMLPITILDVNDNPPKFEKSLASF 863 (1095)
Q Consensus 791 ~~g~~~~~F~Id----~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g---~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~ 863 (1095)
.+ +..++|.|+ +.+|.|++.++||||....|.|+|+|+|+| .|.++++++|.|+|.|+|| +|.|.+..|.+
T Consensus 262 ~~-~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~ 339 (550)
T 3q2v_A 262 VN-DPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRV 339 (550)
T ss_dssp SS-CSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEE
T ss_pred Ee-CCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEE
Confidence 87 677899998 789999999999999999999999999987 3567899999999999999 99999999999
Q ss_pred EEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC-cceEEeCCcceEEEccccccccc-----CeeEEEEEEEeCCCC
Q psy1041 864 RVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDT-QDFAVDSATGSLYVSASLDRERQ-----DLYELKIRASDCDGR 937 (1095)
Q Consensus 864 ~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~-~~F~Id~~tG~i~~~~~LD~E~~-----~~y~l~V~A~D~~g~ 937 (1095)
.|+|++++|+.|++++|+|+|.|.|+.++|+|.++. ++|.|++.+|.|++.+.||||.. ..|.|+|+|+|++
T Consensus 340 ~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g-- 417 (550)
T 3q2v_A 340 EVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDG-- 417 (550)
T ss_dssp EEETTCCSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCS--
T ss_pred EEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCC--
Confidence 999999999999999999999999999999997664 78999999999999999999998 9999999999998
Q ss_pred CCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCc-eEEEEEEeCCCCCCCEEEeC
Q psy1041 938 NDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGG-VVRYTIVSDNEADDVFSIDR 1016 (1095)
Q Consensus 938 ~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~-~v~Y~i~~~~~~~~~F~Id~ 1016 (1095)
.|+++++++|+|+|.|+|||+|+|.. |...|.|+.+.|.. |.|+|+|.+.|+ .++|+|..+......|.++.
T Consensus 418 --~p~~s~~~~v~I~V~DvNDn~P~~~~--~~~~v~e~~~~~~~---v~A~D~D~~~n~~~~~~~l~~~~~~~~~~~~~~ 490 (550)
T 3q2v_A 418 --SPIATGTGTLLLVLLDVNDNAPIPEP--RNMQFCQRNPQPHI---ITILDPDLPPNTSPFTAELTHGASVNWTIEYND 490 (550)
T ss_dssp --SSCCCEEEEEEEEEECCCCCCCEESC--SSCEEESSSCCCEE---EEEECCSCTTSSSSCCCEEEECCSSSCEEECCS
T ss_pred --CCcceeEEEEEEEEEeCCCCCCcCcC--cccceeecCCCcEE---EEEECCCCCCCCCCEEEEECCCCCCCeEEEEec
Confidence 56789999999999999999999974 56788999987754 999999999988 58999988543222344444
Q ss_pred CceEEEEcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCeee
Q psy1041 1017 LTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFS 1072 (1095)
Q Consensus 1017 ~tG~i~~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P~F~ 1072 (1095)
.+|.+...+.+++|..+.|.|.|+|+|+|+ ++++++|+|.|.|+||| +|...
T Consensus 491 ~~g~~~~~~~~~~~~~~~y~l~V~a~D~g~--lss~~tv~V~V~d~ndn--~~~~~ 542 (550)
T 3q2v_A 491 AAQESLILQPRKDLEIGEYKIHLKLADNQN--KDQVTTLDVHVCDCEGT--VNNCM 542 (550)
T ss_dssp TTSSEEEEECSCC----CEECEEECCSSSC--CCCBCCCEEEEECCCC--------
T ss_pred CCCcEEEEEecccCCCceEEEEEEEEECCc--ceeEEEEEEEEEEecCC--Ccchh
Confidence 459888888999999999999999999998 89999999999999999 66544
No 7
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.4e-76 Score=714.82 Aligned_cols=499 Identities=26% Similarity=0.359 Sum_probs=443.3
Q ss_pred cEEEEEeCCCCC--CceEEEEEEeeCCCCCCceEEEEEEeCCC----CCcEEEECCccEEEEceecCcccccEEEEEEEE
Q psy1041 383 IYEVDVPETTPV--NTPIIRLKVSDADDGKNAQVFLEIVGGNE----GGEFNINPETGMLYTAVTLDAEDKAFYTLTVSA 456 (1095)
Q Consensus 383 ~~~~~v~E~~~~--g~~v~~v~a~D~D~g~n~~i~ysi~~~~~----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a 456 (1095)
.|.++|+||.+. +..++++.+ |.| .|+.++|+|.+++. .+.|.|++.+|+|++.++||||....|.|+|+|
T Consensus 10 ~~~~~v~En~~g~~~~~v~~~~~-d~d--~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A 86 (546)
T 1l3w_A 10 IPPIKVSENERGPFPKRLVQIKS-NKD--RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHA 86 (546)
T ss_dssp CCCEEEESSCCSSSCEEEEECCC-SGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred cceeEecCCCCCCCCcEEEEEEc-CCC--CCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEE
Confidence 467899999972 233666653 444 68899999987642 468999999999999999999999999999999
Q ss_pred EeCCCCCCceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEEEEEEeeCCCC---CCceEEEEEecCC----
Q psy1041 457 IDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSG---ENAYISYSIANLK---- 529 (1095)
Q Consensus 457 ~D~g~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g---~n~~i~ysi~~~~---- 529 (1095)
+|+|.+ .+++++.|+|+|.|+|||+|+|.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+|.++.
T Consensus 87 ~D~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~ 164 (546)
T 1l3w_A 87 VSENGS--PVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEP 164 (546)
T ss_dssp EESSSC--BCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCS
T ss_pred EeCCCC--cccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcc
Confidence 999854 3577899999999999999999999999999999999999999999999998 6899999998765
Q ss_pred -CCCcEEecccceEEEc-eeccccccccEEEEEEEEEECCcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCC
Q psy1041 530 -PVPFEIDHFSGVIKTT-QVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPI 607 (1095)
Q Consensus 530 -~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~l~V~a~D~g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~ 607 (1095)
.+.|.|++.+|.|++. +.||||. ...|.|+|+|+|+|+|. +++++.|+|+|+|+|||+|.|.+..|...|+|+ ++
T Consensus 165 ~~~~F~Id~~tG~i~~~~~~LD~E~-~~~y~l~V~A~D~g~~~-~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~ 241 (546)
T 1l3w_A 165 IPNLFTINRETGVISLIGTGLDREK-FPEYTLTVQATDLEGAG-LSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EI 241 (546)
T ss_dssp CSCSEEECTTTCEEEECSCCCCTTT-CCEEEEEEEEEHHHHTS-CEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SC
T ss_pred cCCcEEEeCCCceEEEeccCCCccc-CceEEEEEEEEECCCCC-cceEEEEEEEEeecCCCCCccccccceEEEEeC-CC
Confidence 3689999999999985 7899998 57899999999998875 567899999999999999999999999999999 99
Q ss_pred CcEEEEEEEEeCC--CCC--eEEEEEEeCCCCCcEEEe----CCCcEEEEeeccCcccccEEEEEEEEecCCC-----cc
Q psy1041 608 GREIITLSAIDFD--AGN--IISYRIVSGNEDGCFALD----ITSGVLSIACDLTDVRVNEREINVTATDSAH-----FS 674 (1095)
Q Consensus 608 g~~v~~v~A~D~D--~~~--~i~y~i~~~~~~~~F~Id----~~tG~i~~~~~ld~~~~~~~~l~V~atD~~~-----~s 674 (1095)
|+.|++|.|+|+| .+. .++|+|.+ +..+.|.|+ ..+|.|+++++||||....|.|+|.|+|+++ ++
T Consensus 242 gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s 320 (546)
T 1l3w_A 242 GFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPT 320 (546)
T ss_dssp CCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCC
T ss_pred CCEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcc
Confidence 9999999999999 443 79999987 777899996 2689999999999999999999999999863 23
Q ss_pred ceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhhhhhhcccccccccceeeeccccccccCCCCccccC
Q psy1041 675 DVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSF 754 (1095)
Q Consensus 675 ~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~ 754 (1095)
..+.++| .|.|+|| +|.|...
T Consensus 321 ~~~~v~I----------------------------------------------------------~V~DvND-~P~f~~~ 341 (546)
T 1l3w_A 321 STATVTV----------------------------------------------------------TVEDVNE-APFFVPA 341 (546)
T ss_dssp CCEEEEE----------------------------------------------------------EEECCCC-CCEESSC
T ss_pred eeEEEEE----------------------------------------------------------EEEcCCC-CCcEecc
Confidence 4455554 4678998 9999998
Q ss_pred cEEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCC----CEEEEEEEEEE
Q psy1041 755 PIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERT----SEYTLNITVYD 830 (1095)
Q Consensus 755 ~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~a~D 830 (1095)
.|.+.|.|+.+.|+.|++|.|+|+|.|.|+.++|+|.++ ..++|.|++.+|.|++.++||||.. ..|.|+|+|+|
T Consensus 342 ~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~-~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D 420 (546)
T 1l3w_A 342 VSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTD 420 (546)
T ss_dssp EECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEE
T ss_pred eEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCC-CCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEE
Confidence 899999999999999999999999999999999999764 4689999999999999999999997 89999999999
Q ss_pred CCCCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCce-EEEEecCCC-cceEEeCCc
Q psy1041 831 LGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAK-VVYSLMTDT-QDFAVDSAT 908 (1095)
Q Consensus 831 ~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~~-v~Ysl~~~~-~~F~Id~~t 908 (1095)
+|.|+++++++|.|+|.|+|||+|+|.+ +.+.|.|+.+.|+ + +.|+|+|.+.|+. ++|+|.++. ..|.| ..+
T Consensus 421 ~g~p~~s~~~~v~I~V~DvNDn~P~f~~--~~~~v~e~~~~g~-v--v~A~D~D~~~n~~~~~y~l~~~~~~~f~i-~~~ 494 (546)
T 1l3w_A 421 DGVSVGTGTGTLILHVLDVNDNGPVPSP--RVFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGSDLTWKA-ELD 494 (546)
T ss_dssp CSSSCCCCCEEEECCBCCCCCSCCCBSC--CCEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCSSSSCBC-CBC
T ss_pred CCCCCcEeEEEEEEEEEECCCCcCCccC--ceEEEecCCCCCe-E--EEEEeCCCCCCCccEEEEECCCCCCCEEE-ecc
Confidence 9999999999999999999999999985 3688999999998 3 9999999999987 899998764 68988 444
Q ss_pred c---eEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCee
Q psy1041 909 G---SLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNF 963 (1095)
Q Consensus 909 G---~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f 963 (1095)
| .+. .+.+|||....|.|.|+|+|+++ ++++++|+|+|+|+|||++.|
T Consensus 495 g~~~~~~-~~~~d~e~~~~y~l~V~a~D~g~------~s~~~~v~I~V~d~NDn~~~C 545 (546)
T 1l3w_A 495 SKGTSML-LSPTQQLKKGDYSIYVLLSDAQN------NPQLTVVNATVCSCEGKAIKC 545 (546)
T ss_dssp TTSSEEE-EBCSSCCCSSCBCCEEECCSSSC------CCEEEECCEEECSCSSSCCCC
T ss_pred CCceEEE-ecccccccCceEEEEEEEEECCc------CceEEEEEEEEEeccCCCCCc
Confidence 4 343 34668999999999999999983 789999999999999998865
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=2.3e-76 Score=712.81 Aligned_cols=497 Identities=23% Similarity=0.306 Sum_probs=441.0
Q ss_pred ccEEEEeecCCC--CcEEEEEEEeeCCCCCCceEEEEEecCC-----CCCcEEecccceEEEceeccccccccEEEEEEE
Q psy1041 490 EMEVSINENEPA--GTSVIKVTAKDKDSGENAYISYSIANLK-----PVPFEIDHFSGVIKTTQVLDYESMRREYILRVR 562 (1095)
Q Consensus 490 ~~~~~V~E~~~~--gt~v~~v~A~D~D~g~n~~i~ysi~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~l~V~ 562 (1095)
.|.++|+||.+. +..++++.+ |.| .|+.++|+|.++. .+.|.|++.+|.|++.+.||||. ...|.|.|+
T Consensus 10 ~~~~~v~En~~g~~~~~v~~~~~-d~d--~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~-~~~y~l~v~ 85 (546)
T 1l3w_A 10 IPPIKVSENERGPFPKRLVQIKS-NKD--RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE-YDKYVLSSH 85 (546)
T ss_dssp CCCEEEESSCCSSSCEEEEECCC-SGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTT-CCEEEEEEE
T ss_pred cceeEecCCCCCCCCcEEEEEEc-CCC--CCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCccc-CceEEEEEE
Confidence 467899999972 334666653 544 6889999998754 25799999999999999999998 579999999
Q ss_pred EEECCcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCC-----CeEEEEEEeCC----
Q psy1041 563 ASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG-----NIISYRIVSGN---- 633 (1095)
Q Consensus 563 a~D~g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~-----~~i~y~i~~~~---- 633 (1095)
|+|+|+|. ++..+.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| ..++|+|.++.
T Consensus 86 A~D~~~~~-~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~ 164 (546)
T 1l3w_A 86 AVSENGSP-VEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEP 164 (546)
T ss_dssp EEESSSCB-CSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCS
T ss_pred EEeCCCCc-ccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcc
Confidence 99998765 345689999999999999999999999999999999999999999999998 37999999866
Q ss_pred CCCcEEEeCCCcEEEEe-eccCcccccEEEEEEEEecCCCcc--ceEEEEEEEeecccCCCCCccccCCCCCeEEeeccc
Q psy1041 634 EDGCFALDITSGVLSIA-CDLTDVRVNEREINVTATDSAHFS--DVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGV 710 (1095)
Q Consensus 634 ~~~~F~Id~~tG~i~~~-~~ld~~~~~~~~l~V~atD~~~~s--~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~ 710 (1095)
..++|.|++.||.|++. +.||||....|.|+|+|+|++++. ..+.+.|
T Consensus 165 ~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I----------------------------- 215 (546)
T 1l3w_A 165 IPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII----------------------------- 215 (546)
T ss_dssp CSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEE-----------------------------
T ss_pred cCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEE-----------------------------
Confidence 45799999999999995 789999999999999999987543 3333333
Q ss_pred eeeeehhhhhhhhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCC--CCCCcEEEE
Q psy1041 711 ARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRD--LGYNGKLVF 788 (1095)
Q Consensus 711 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D--~g~n~~v~y 788 (1095)
.|.|+|||+|.|....|.+.|+|+ +.|+.|+++.|+|+| .|.|+.++|
T Consensus 216 -----------------------------~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y 265 (546)
T 1l3w_A 216 -----------------------------QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVY 265 (546)
T ss_dssp -----------------------------EEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEEC
T ss_pred -----------------------------EEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEE
Confidence 468999999999999999999999 999999999999999 788999999
Q ss_pred EEEeCCCCCcEEEe--C--CceEEEEcccCCccCCCEEEEEEEEEECC---CCCCceeEEEEEEEEecCCCCCcccccce
Q psy1041 789 GISSGDNDSVFRID--P--DSGELKVVGYLDRERTSEYTLNITVYDLG---KPQKSTSKMLPITILDVNDNPPKFEKSLA 861 (1095)
Q Consensus 789 ~i~~g~~~~~F~Id--~--~tG~i~~~~~LD~E~~~~y~l~V~a~D~g---~p~~s~~~~v~I~V~DvNDn~P~F~~~~y 861 (1095)
+|.+ +..+.|.|+ + .+|.|++.++||||....|.|+|+|+|+| .|.++++++|+|+|.|+|| +|+|.+..|
T Consensus 266 ~i~~-~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y 343 (546)
T 1l3w_A 266 KIRV-NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVS 343 (546)
T ss_dssp CBSC-CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEE
T ss_pred EEEe-CCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceE
Confidence 9987 677899996 3 68999999999999999999999999986 3667899999999999999 999999999
Q ss_pred EEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC-cceEEeCCcceEEEccccccccc----CeeEEEEEEEeCCC
Q psy1041 862 SFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDT-QDFAVDSATGSLYVSASLDRERQ----DLYELKIRASDCDG 936 (1095)
Q Consensus 862 ~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~-~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~A~D~~g 936 (1095)
.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|.++. ++|.|++.+|.|++.++||||.. ..|.|+|+|+|++
T Consensus 344 ~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g- 422 (546)
T 1l3w_A 344 RVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDG- 422 (546)
T ss_dssp CCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECS-
T ss_pred EEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECC-
Confidence 99999999999999999999999999999999998864 89999999999999999999997 8999999999998
Q ss_pred CCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCce-EEEEEEeCCCCCCCEEEe
Q psy1041 937 RNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGV-VRYTIVSDNEADDVFSID 1015 (1095)
Q Consensus 937 ~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-v~Y~i~~~~~~~~~F~Id 1015 (1095)
.|+++++++|+|+|.|+|||+|+|... ...|.|+.++|+ + +.|+|+|.|.|+. ++|+|..+ ....|.|
T Consensus 423 ---~p~~s~~~~v~I~V~DvNDn~P~f~~~--~~~v~e~~~~g~-v--v~A~D~D~~~n~~~~~y~l~~~--~~~~f~i- 491 (546)
T 1l3w_A 423 ---VSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHG--SDLTWKA- 491 (546)
T ss_dssp ---SSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSC--SSSSCBC-
T ss_pred ---CCCcEeEEEEEEEEEECCCCcCCccCc--eEEEecCCCCCe-E--EEEEeCCCCCCCccEEEEECCC--CCCCEEE-
Confidence 567899999999999999999999843 678999999997 3 9999999999987 89999873 2457988
Q ss_pred CCce---EEEEcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCC
Q psy1041 1016 RLTG---TIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAP 1069 (1095)
Q Consensus 1016 ~~tG---~i~~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P 1069 (1095)
..+| .+.+ +.+|||..+.|.|.|.|+|+|. ++++++|+|.|.|+||| ++
T Consensus 492 ~~~g~~~~~~~-~~~d~e~~~~y~l~V~a~D~g~--~s~~~~v~I~V~d~NDn--~~ 543 (546)
T 1l3w_A 492 ELDSKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVCSCEGK--AI 543 (546)
T ss_dssp CBCTTSSEEEE-BCSSCCCSSCBCCEEECCSSSC--CCEEEECCEEECSCSSS--CC
T ss_pred eccCCceEEEe-cccccccCceEEEEEEEEECCc--CceEEEEEEEEEeccCC--CC
Confidence 4444 4544 4568999999999999999998 89999999999999998 55
No 9
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.7e-61 Score=559.69 Aligned_cols=379 Identities=24% Similarity=0.370 Sum_probs=341.8
Q ss_pred CcEEEEEEEEeCCCCC--eEEEEEEeCCCCCcEEEeC--------CCcEEEEeeccCcccc---cEEEEEEEEecCCCc-
Q psy1041 608 GREIITLSAIDFDAGN--IISYRIVSGNEDGCFALDI--------TSGVLSIACDLTDVRV---NEREINVTATDSAHF- 673 (1095)
Q Consensus 608 g~~v~~v~A~D~D~~~--~i~y~i~~~~~~~~F~Id~--------~tG~i~~~~~ld~~~~---~~~~l~V~atD~~~~- 673 (1095)
...+++|+|+|+|.|. .++|+|..++....|.|++ .+|.|++++.||||.. ..|.|.|.|+|.+.+
T Consensus 8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~ 87 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 87 (419)
T ss_dssp EEEEEEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCS
T ss_pred ccceEEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCC
Confidence 3568999999999775 7999998877778999997 8999999999999987 689999999998742
Q ss_pred --c--ceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhhhhhhcccccccccceeeeccccccccCCCC
Q psy1041 674 --S--DVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVP 749 (1095)
Q Consensus 674 --s--~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P 749 (1095)
. ..+.+.| .|.|+|||+|
T Consensus 88 ~~~~~~~~~v~I----------------------------------------------------------~V~DvNDn~P 109 (419)
T 3ubh_A 88 GIKYTDNQRVII----------------------------------------------------------LVKDVNDEPP 109 (419)
T ss_dssp SSCCEEEEEEEE----------------------------------------------------------EEECCCCSCC
T ss_pred CCCCcceEEEEE----------------------------------------------------------EEEECCCCCC
Confidence 2 2333433 4689999999
Q ss_pred ccccCc--EEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEE
Q psy1041 750 EFFSFP--IELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNIT 827 (1095)
Q Consensus 750 ~f~~~~--~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~ 827 (1095)
.|.... |...|+|+++.|+.|+++.|+|+|.|.| ++|+|..++..++|.|++.+|.|++.+.||+|....|.|+|+
T Consensus 110 ~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~ 187 (419)
T 3ubh_A 110 YFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVK 187 (419)
T ss_dssp EECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEE
T ss_pred cccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCceEEEEecccccccccEEEEEEE
Confidence 998765 7899999999999999999999999877 899999888889999999999999999999999999999999
Q ss_pred EEECCCC----CCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecC-C--Cc
Q psy1041 828 VYDLGKP----QKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMT-D--TQ 900 (1095)
Q Consensus 828 a~D~g~p----~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~-~--~~ 900 (1095)
|+|+|.| ++++++.+.|.|.| |||+|.|.+..|.+.|+||.++|+.|++|+|+|+| |+.++|+|.. + .+
T Consensus 188 A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~ 263 (419)
T 3ubh_A 188 AEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAG 263 (419)
T ss_dssp EEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCS
T ss_pred EEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCC
Confidence 9998764 56778889999999 99999999999999999999999999999999987 7789999973 3 38
Q ss_pred ceEEeCCcceEEEcccccccccC---eeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEE-EEeCCC
Q psy1041 901 DFAVDSATGSLYVSASLDRERQD---LYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSV-KVREDI 976 (1095)
Q Consensus 901 ~F~Id~~tG~i~~~~~LD~E~~~---~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~-~v~E~~ 976 (1095)
+|.|++.+|.|++.++||||... .|.|+|+|+|.++ ++++++.|+|+|.|+|||+|.|..+.|.+ .|.|+.
T Consensus 264 ~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~-----~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~ 338 (419)
T 3ubh_A 264 TFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-----GFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDI 338 (419)
T ss_dssp SEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTT-----SCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTC
T ss_pred cEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCC-----CcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCC
Confidence 99999999999999999999875 7999999997543 37889999999999999999999999987 799999
Q ss_pred CCCcEEEEEEEEcCCCCCCceEEEEEEeCCCCCCCEEEeCCceEEEEcccCCCCC-CCEEEEEEEEEECCCCCceeEEEE
Q psy1041 977 PVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEK-RQVHSLVVRAKDNGSPPLYSEATL 1055 (1095)
Q Consensus 977 ~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~~~~F~Id~~tG~i~~~~~ld~E~-~~~~~l~V~A~D~g~p~ls~~~~v 1055 (1095)
++|+.|++|.|+|+|.|.|+.++|+|.. ++|.|++ +|.|++.++||||. ...|.|+|.|+|+|.|+++++++|
T Consensus 339 ~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-----~~F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~sst~~v 412 (419)
T 3ubh_A 339 PLGTSILRVKAMDSDSGSNAEIEYLVSD-----DHFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATV 412 (419)
T ss_dssp CTTCEEEECCEECSSCGGGGCEEEEESC-----TTEEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCEEEEEE
T ss_pred CCCCEEEEEEEEeCCCCCCCEEEEEEcC-----CcEEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCceeEEEE
Confidence 9999999999999999999999999954 4799998 89999999999998 689999999999999999999999
Q ss_pred EEEEEe
Q psy1041 1056 IVEVSD 1061 (1095)
Q Consensus 1056 ~I~V~d 1061 (1095)
.|.|.|
T Consensus 413 ~I~v~n 418 (419)
T 3ubh_A 413 RVYTKN 418 (419)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999976
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.6e-60 Score=557.10 Aligned_cols=386 Identities=25% Similarity=0.378 Sum_probs=345.4
Q ss_pred CceEEEEEEeeCCCCCCceEEEEEEeCCCCCcEEEEC--------CccEEEEceecCcccc---cEEEEEEEEEeCCCCC
Q psy1041 395 NTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINP--------ETGMLYTAVTLDAEDK---AFYTLTVSAIDQGNAG 463 (1095)
Q Consensus 395 g~~v~~v~a~D~D~g~n~~i~ysi~~~~~~~~F~Id~--------~tG~i~~~~~LD~E~~---~~y~l~V~a~D~g~~~ 463 (1095)
..++.+|+|+|+|.|.|+.++|+|.+++....|+|++ .+|.|++.++||||.. ..|.|.|.|+|.|.++
T Consensus 8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~ 87 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 87 (419)
T ss_dssp EEEEEEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCS
T ss_pred ccceEEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCC
Confidence 4679999999999999999999998877778999997 7999999999999997 7999999999998553
Q ss_pred -CceeeeEEEEEEEeecCCCCCcccCCc--cEEEEeecCCCCcEEEEEEEeeCCCCCCceEEEEEecCC-CCCcEEeccc
Q psy1041 464 -TRKQSAAKVKVNIVDTNDNDPLFDSPE--MEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLK-PVPFEIDHFS 539 (1095)
Q Consensus 464 -~~~~~~~~v~I~V~DvNDn~P~f~~~~--~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~ysi~~~~-~~~F~Id~~t 539 (1095)
.++++.+.|+|+|+|+|||+|.|.... |.+.|+|++++|+.|+++.|+|+|.|.| ++|+|..+. .+.|.|++.+
T Consensus 88 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~t 165 (419)
T 3ubh_A 88 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERS 165 (419)
T ss_dssp SSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTT
T ss_pred CCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCc
Confidence 246788999999999999999999887 7899999999999999999999999887 899998644 4789999999
Q ss_pred ceEEEceeccccccccEEEEEEEEEECCcC---CceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEE
Q psy1041 540 GVIKTTQVLDYESMRREYILRVRASDWGLP---YRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSA 616 (1095)
Q Consensus 540 G~i~~~~~lD~E~~~~~~~l~V~a~D~g~p---~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A 616 (1095)
|.|++.+.||||. ...|.|+|+|+|+|+| ..+++++.++|.|.| |||+|.|.+..|.+.|+||+++|+.|++|.|
T Consensus 166 G~i~~~~~ld~e~-~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A 243 (419)
T 3ubh_A 166 GVVRTRGTDLFQL-DMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKA 243 (419)
T ss_dssp CEEEECSSSCCCB-TCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCE
T ss_pred eEEEEeccccccc-ccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEE
Confidence 9999999999997 5689999999998764 234667889999999 9999999999999999999999999999999
Q ss_pred EeCCCCCeEEEEEE-eCCCCCcEEEeCCCcEEEEeeccCccccc---EEEEEEEEec-CCCccceEEEEEEEeecccCCC
Q psy1041 617 IDFDAGNIISYRIV-SGNEDGCFALDITSGVLSIACDLTDVRVN---EREINVTATD-SAHFSDVVRIRINLVSARRIPE 691 (1095)
Q Consensus 617 ~D~D~~~~i~y~i~-~~~~~~~F~Id~~tG~i~~~~~ld~~~~~---~~~l~V~atD-~~~~s~~~~v~I~v~~~~~~~~ 691 (1095)
+|+| +..++|+|. .++..++|.|++.+|.|++.++||+|... .|.|+|.|+| ++..+..+.++|
T Consensus 244 ~D~d-n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I---------- 312 (419)
T 3ubh_A 244 KSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTI---------- 312 (419)
T ss_dssp ECSS-CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEE----------
T ss_pred ecCC-CCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEE----------
Confidence 9998 557999998 46778899999999999999999999865 7999999995 454444455544
Q ss_pred CCccccCCCCCeEEeeccceeeeehhhhhhhhcccccccccceeeeccccccccCCCCccccCcEEE-EEecCCCCCcEE
Q psy1041 692 PGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIEL-QVNESVPLKSTL 770 (1095)
Q Consensus 692 ~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~-~v~E~~~~g~~v 770 (1095)
.|.|+|||+|.|....|.. .|.|+.+.|+.|
T Consensus 313 ------------------------------------------------~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v 344 (419)
T 3ubh_A 313 ------------------------------------------------RVTDVNDNAPKFELPDYQAHNVDEDIPLGTSI 344 (419)
T ss_dssp ------------------------------------------------EEECCCCCCCEESSSEEEEEEEETTCCTTCEE
T ss_pred ------------------------------------------------EEEccCCCCCcccCCcceeEEecCCCCCCCEE
Confidence 4689999999999888876 799999999999
Q ss_pred EEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccC-CCEEEEEEEEEECCCCCCceeEEEEEEEEe
Q psy1041 771 TKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRER-TSEYTLNITVYDLGKPQKSTSKMLPITILD 848 (1095)
Q Consensus 771 ~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~-~~~y~l~V~a~D~g~p~~s~~~~v~I~V~D 848 (1095)
++|.|+|+|.|.|+.++|+|.+ ++|.|++ +|+|++.++||||. ...|.|+|+|+|+|.|+++++++|.|.|.|
T Consensus 345 ~~v~A~D~D~g~n~~v~Y~i~~----~~F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~sst~~v~I~v~n 418 (419)
T 3ubh_A 345 LRVKAMDSDSGSNAEIEYLVSD----DHFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKN 418 (419)
T ss_dssp EECCEECSSCGGGGCEEEEESC----TTEEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCEEEEEEEEEEEC
T ss_pred EEEEEEeCCCCCCCEEEEEEcC----CcEEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCceeEEEEEEEEec
Confidence 9999999999999999999964 4899998 89999999999998 679999999999999999999999998876
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.6e-52 Score=469.54 Aligned_cols=299 Identities=31% Similarity=0.498 Sum_probs=273.9
Q ss_pred EEEEecC--CCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECCC-
Q psy1041 757 ELQVNES--VPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGK- 833 (1095)
Q Consensus 757 ~~~v~E~--~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~- 833 (1095)
.+.|.|+ .+.|+.|+++. +|+|.| |+.++|+|.+++...+|.|++.+|.|++.++||||....|.|+|+|+|.|.
T Consensus 6 ~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 83 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN 83 (322)
T ss_dssp CEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTC
T ss_pred eeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCC
Confidence 3578999 88999999986 899998 789999998876667999999999999999999999999999999999875
Q ss_pred CCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCC---CCCceEEEEecCCCcceEEeCCcce
Q psy1041 834 PQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDL---GDNAKVVYSLMTDTQDFAVDSATGS 910 (1095)
Q Consensus 834 p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---g~n~~v~Ysl~~~~~~F~Id~~tG~ 910 (1095)
+++++++.|.|.|.|+|||+|+|.+..|.++|+|++++|+.|++++|+|+|. |.|+.++|+|.++...|.|++.+|.
T Consensus 84 ~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG~ 163 (322)
T 2a62_A 84 KPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPETAI 163 (322)
T ss_dssp SEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTTTEEECTTTCC
T ss_pred CcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCCCEEEecCCCE
Confidence 4567888999999999999999999999999999999999999999999996 7899999999998899999999999
Q ss_pred EEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEc
Q psy1041 911 LYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASD 989 (1095)
Q Consensus 911 i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D 989 (1095)
|++. ++||||....|.|+|+|+|++++ ..+++++++|+|+|.|+|||+|+|.+..|.+.|.|+.++|+.|++|.|+|
T Consensus 164 i~~~~~~LD~E~~~~y~l~V~a~D~g~p--~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D 241 (322)
T 2a62_A 164 IKTALPNMDREAKEEYLVVIQAKDMGGH--SGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKAND 241 (322)
T ss_dssp EEECSSCCCGGGCSEEEEEEEEEESCSS--SSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCC
T ss_pred EEecccCCCcccCCeEEEEEEEEECCCC--CCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEe
Confidence 9998 99999999999999999999852 12478999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEEEeCCCCCCCEEEe----CCceEEEEcccCCCCCCCEEEEEEEEEECCCCC-------ceeEEEEEEE
Q psy1041 990 PDLGQGGVVRYTIVSDNEADDVFSID----RLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPP-------LYSEATLIVE 1058 (1095)
Q Consensus 990 ~D~g~n~~v~Y~i~~~~~~~~~F~Id----~~tG~i~~~~~ld~E~~~~~~l~V~A~D~g~p~-------ls~~~~v~I~ 1058 (1095)
+|.|.|+.++|+|..+ +..+.|.|+ +.+|.|+++++||||....|.|+|+|+|+|.|+ ++++++|.|+
T Consensus 242 ~D~g~n~~i~Y~i~~g-~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~ 320 (322)
T 2a62_A 242 QDIGENAQSSYDIIDG-DGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIV 320 (322)
T ss_dssp SSCGGGTCCEEEEC----CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEE
T ss_pred CCCCCCceEEEEEECC-CCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEE
Confidence 9999999999999874 346899999 468999999999999999999999999999874 5688999998
Q ss_pred EE
Q psy1041 1059 VS 1060 (1095)
Q Consensus 1059 V~ 1060 (1095)
|.
T Consensus 321 V~ 322 (322)
T 2a62_A 321 VE 322 (322)
T ss_dssp EC
T ss_pred EC
Confidence 73
No 12
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=4.9e-49 Score=442.65 Aligned_cols=290 Identities=25% Similarity=0.378 Sum_probs=250.0
Q ss_pred cEEEEEEEEeCCCCCCcEEEEEEEeCCCC---------CcEEEeCCceEEEEcccCCccCC-----CEEEEEEEEEECCC
Q psy1041 768 STLTKIIARDRDLGYNGKLVFGISSGDND---------SVFRIDPDSGELKVVGYLDRERT-----SEYTLNITVYDLGK 833 (1095)
Q Consensus 768 ~~v~~v~A~D~D~g~n~~v~y~i~~g~~~---------~~F~Id~~tG~i~~~~~LD~E~~-----~~y~l~V~a~D~g~ 833 (1095)
.++.++.|+|+|.|.||.+.|+|..++.. .+|.|++ +|.|++.++||||.. ..|.|+|+|.|+|.
T Consensus 4 ~p~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~ 82 (316)
T 3ubf_A 4 RPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 82 (316)
T ss_dssp EEEEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-----
T ss_pred CceEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCC
Confidence 46788999999999999999998776532 4678888 999999999999984 57899999999887
Q ss_pred C-CCceeEEEEEEEEecCCCCCcccccc--eEEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCC--CcceEEeCCc
Q psy1041 834 P-QKSTSKMLPITILDVNDNPPKFEKSL--ASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTD--TQDFAVDSAT 908 (1095)
Q Consensus 834 p-~~s~~~~v~I~V~DvNDn~P~F~~~~--y~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~--~~~F~Id~~t 908 (1095)
| ++++++.|.|.|.|+|||+|.|.+.. |.+.|+|++++|+.|++++|+|+|.|.| ++|+|..+ .+.|.|++.+
T Consensus 83 ~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~t 160 (316)
T 3ubf_A 83 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERS 160 (316)
T ss_dssp --CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTT
T ss_pred CCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCc
Confidence 6 57889999999999999999999876 8999999999999999999999999886 99999864 4899999999
Q ss_pred ceEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEE
Q psy1041 909 GSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSAS 988 (1095)
Q Consensus 909 G~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~ 988 (1095)
|.|++.++||||....|.|+|+|+|++|....+++++++.|+|+|.| |||+|+|.+..|.+.|.|+.++|+.|++|.|+
T Consensus 161 G~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~ 239 (316)
T 3ubf_A 161 GVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAK 239 (316)
T ss_dssp CEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEE
T ss_pred cEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999864334567888999999999 99999999999999999999999999999999
Q ss_pred cCCCCCCceEEEEEEeCCCCCCCEEEeCCceEEEEcccCCCCCC---CEEEEEEEEEECCCCCceeEEEEEEEEEecCCC
Q psy1041 989 DPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKR---QVHSLVVRAKDNGSPPLYSEATLIVEVSDVNEN 1065 (1095)
Q Consensus 989 D~D~g~n~~v~Y~i~~~~~~~~~F~Id~~tG~i~~~~~ld~E~~---~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn 1065 (1095)
|+| |+.++|+|...++..++|.|++.+|.|++.++||||.. ..|.|+|+|+|.++ +++++++|+|+|.|+|||
T Consensus 240 D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g-~~~~~~~v~I~V~DvNDn 315 (316)
T 3ubf_A 240 SFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDN 315 (316)
T ss_dssp CTT---CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSS-SCEEEEEEEEEEECC---
T ss_pred eCC---CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECCC-CCEEEEEEEEEEEecCCC
Confidence 998 78899999843456789999999999999999999997 79999999995443 489999999999999997
No 13
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=4.6e-48 Score=433.42 Aligned_cols=294 Identities=30% Similarity=0.400 Sum_probs=264.4
Q ss_pred EEEEeCC--CCCCceEEEEEEeeCCCCCCceEEEEEEeCCCCCcEEEECCccEEEEceecCcccccEEEEEEEEEeCCCC
Q psy1041 385 EVDVPET--TPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNA 462 (1095)
Q Consensus 385 ~~~v~E~--~~~g~~v~~v~a~D~D~g~n~~i~ysi~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~ 462 (1095)
..+|.|+ .+.|+.|+++. +|+|.| ++.++|+|.+++..+.|.|++.+|.|++.++||||....|.|+|+|+|++.+
T Consensus 6 ~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 83 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN 83 (322)
T ss_dssp CEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTC
T ss_pred eeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCC
Confidence 4678999 88999999885 899998 7899999988666679999999999999999999999999999999998743
Q ss_pred CCceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEEEEEEeeCCC---CCCceEEEEEecCCCCCcEEeccc
Q psy1041 463 GTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDS---GENAYISYSIANLKPVPFEIDHFS 539 (1095)
Q Consensus 463 ~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~---g~n~~i~ysi~~~~~~~F~Id~~t 539 (1095)
.++++.+.|.|+|.|+|||+|.|....|.++|+|++++|+.|+++.|+|+|. |.|+.++|+|.++ ...|.|++.+
T Consensus 84 -~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~-~~~F~Id~~t 161 (322)
T 2a62_A 84 -KPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEG-QPYFSIEPET 161 (322)
T ss_dssp -SEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEEC-TTTEEECTTT
T ss_pred -CcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccC-CCCEEEecCC
Confidence 2467889999999999999999999999999999999999999999999996 8899999999885 4689999999
Q ss_pred ceEEEc-eeccccccccEEEEEEEEEECCcCC-ceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEE
Q psy1041 540 GVIKTT-QVLDYESMRREYILRVRASDWGLPY-RRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAI 617 (1095)
Q Consensus 540 G~i~~~-~~lD~E~~~~~~~l~V~a~D~g~p~-~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~ 617 (1095)
|.|++. +.||||. ...|.|+|+|+|+|.|+ .+++.++|+|+|.|+|||+|.|.+..|...|+|++++|+.|++|.|+
T Consensus 162 G~i~~~~~~LD~E~-~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~ 240 (322)
T 2a62_A 162 AIIKTALPNMDREA-KEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKAN 240 (322)
T ss_dssp CCEEECSSCCCGGG-CSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECC
T ss_pred CEEEecccCCCccc-CCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEE
Confidence 999998 8999998 57899999999999874 45678999999999999999999999999999999999999999999
Q ss_pred eCCCCC--eEEEEEEeCCCCCcEEEe----CCCcEEEEeeccCcccccEEEEEEEEecCCCc---------cceEEEEEE
Q psy1041 618 DFDAGN--IISYRIVSGNEDGCFALD----ITSGVLSIACDLTDVRVNEREINVTATDSAHF---------SDVVRIRIN 682 (1095)
Q Consensus 618 D~D~~~--~i~y~i~~~~~~~~F~Id----~~tG~i~~~~~ld~~~~~~~~l~V~atD~~~~---------s~~~~v~I~ 682 (1095)
|+|.|. .++|+|..++..+.|.|+ +.+|.|+++++||+|....|.|+|.|+|+|.+ ++.+.|.|+
T Consensus 241 D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~ 320 (322)
T 2a62_A 241 DQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIV 320 (322)
T ss_dssp CSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEE
T ss_pred eCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEE
Confidence 999885 799999988888999999 46899999999999999999999999998743 345666666
Q ss_pred E
Q psy1041 683 L 683 (1095)
Q Consensus 683 v 683 (1095)
|
T Consensus 321 V 321 (322)
T 2a62_A 321 V 321 (322)
T ss_dssp E
T ss_pred E
Confidence 5
No 14
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=3e-45 Score=411.79 Aligned_cols=286 Identities=23% Similarity=0.296 Sum_probs=241.7
Q ss_pred EEEEEEEeeCCCCCCceEEEEEecCC----------CCCcEEecccceEEEceecccccc----ccEEEEEEEEEECCcC
Q psy1041 504 SVIKVTAKDKDSGENAYISYSIANLK----------PVPFEIDHFSGVIKTTQVLDYESM----RREYILRVRASDWGLP 569 (1095)
Q Consensus 504 ~v~~v~A~D~D~g~n~~i~ysi~~~~----------~~~F~Id~~tG~i~~~~~lD~E~~----~~~~~l~V~a~D~g~p 569 (1095)
.+.++.|+|+|.|.+|++.|+|.... ..+|.|++ +|.|++.+.||||.. ...|.|+|+|.|+|.|
T Consensus 5 p~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~ 83 (316)
T 3ubf_A 5 PTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 83 (316)
T ss_dssp EEEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC------
T ss_pred ceEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCC
Confidence 46677777777777777777775532 24789999 999999999999973 3479999999999877
Q ss_pred CceeeEEEEEEEEEeCCCCCCcccccc--eEEEecCCCCCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCcEEEeCCCcEE
Q psy1041 570 YRRQTEMQLKIKLLDVNDNRPQFEKVD--CLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVL 647 (1095)
Q Consensus 570 ~~~s~~~~v~I~V~dvNDn~P~f~~~~--~~~~V~E~~~~g~~v~~v~A~D~D~~~~i~y~i~~~~~~~~F~Id~~tG~i 647 (1095)
..+++.+.|+|+|.|+|||+|.|.+.. |...|+|++++|+.|+++.|+|+|.|.+++|+|..++..++|.|++.+|.|
T Consensus 84 ~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~~tG~i 163 (316)
T 3ubf_A 84 IKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVV 163 (316)
T ss_dssp -CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEEESSSCEEECTTTCEE
T ss_pred CcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCceEEEEEeCCCCCEEEEECCccEE
Confidence 666788999999999999999999887 899999999999999999999999998999999988888899999999999
Q ss_pred EEeeccCcccccEEEEEEEEecCCCc------cceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhhhh
Q psy1041 648 SIACDLTDVRVNEREINVTATDSAHF------SDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAA 721 (1095)
Q Consensus 648 ~~~~~ld~~~~~~~~l~V~atD~~~~------s~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~~~ 721 (1095)
+++++||+|....|.|+|.|+|+++. +..+.++|
T Consensus 164 ~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I---------------------------------------- 203 (316)
T 3ubf_A 164 RTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERL---------------------------------------- 203 (316)
T ss_dssp EECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEE----------------------------------------
T ss_pred EECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEE----------------------------------------
Confidence 99999999999999999999998742 12222222
Q ss_pred hhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEE-eCCCCCcEE
Q psy1041 722 EKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGIS-SGDNDSVFR 800 (1095)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~-~g~~~~~F~ 800 (1095)
.|.| |||+|.|.+..|.+.|+|+.+.|+.|+++.|+|+| |+.++|+|. .++..++|.
T Consensus 204 ------------------~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~ 261 (316)
T 3ubf_A 204 ------------------SIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFN 261 (316)
T ss_dssp ------------------EEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEE
T ss_pred ------------------EEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEE
Confidence 4568 99999999999999999999999999999999998 689999998 677889999
Q ss_pred EeCCceEEEEcccCCccCC---CEEEEEEEEEECCCCCCceeEEEEEEEEecCCCC
Q psy1041 801 IDPDSGELKVVGYLDRERT---SEYTLNITVYDLGKPQKSTSKMLPITILDVNDNP 853 (1095)
Q Consensus 801 Id~~tG~i~~~~~LD~E~~---~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~ 853 (1095)
|++.+|.|++.++||||.. ..|.|+|+|+|.++ ++++++.|+|+|+|+||||
T Consensus 262 Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 262 IGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp ECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSS-SCEEEEEEEEEEECC----
T ss_pred EECCeEEEEECCcCCccccCCCceEEEEEEEEECCC-CCEEEEEEEEEEEecCCCC
Confidence 9999999999999999998 79999999995433 4788999999999999986
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.1e-38 Score=334.01 Aligned_cols=202 Identities=32% Similarity=0.569 Sum_probs=189.2
Q ss_pred CCCCcccccceE--EEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC--cceEEeCCcceEEEcccccccccCeeE
Q psy1041 851 DNPPKFEKSLAS--FRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDT--QDFAVDSATGSLYVSASLDRERQDLYE 926 (1095)
Q Consensus 851 Dn~P~F~~~~y~--~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~--~~F~Id~~tG~i~~~~~LD~E~~~~y~ 926 (1095)
|++|+|.+..|. ++|+|++++|+.|+++.|+|+|. +.++|+|.++. ++|.|++.+|.|++.++||||....|.
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~ 79 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFT 79 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEE
Confidence 569999999887 79999999999999999999994 46899998764 789999999999999999999999999
Q ss_pred EEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCC
Q psy1041 927 LKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDN 1006 (1095)
Q Consensus 927 l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~ 1006 (1095)
|+|.|+|+++ ..++.|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|+++.|+|+|.|.|+.++|+|..
T Consensus 80 l~v~a~D~~~-------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-- 150 (210)
T 3mvs_A 80 VEFSVSDHQG-------VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP-- 150 (210)
T ss_dssp EEEEEECSSC-------EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESS--
T ss_pred EEEEEEeCCC-------CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeC--
Confidence 9999999873 4678999999999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEECC-CCCceeEEEEEEEEEecCCC
Q psy1041 1007 EADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNG-SPPLYSEATLIVEVSDVNEN 1065 (1095)
Q Consensus 1007 ~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D~g-~p~ls~~~~v~I~V~dvNdn 1065 (1095)
..+.|.|++.+|.|++.++||||....|.|+|+|+|+| .|+++++++|+|+|.|+|||
T Consensus 151 -~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~ 209 (210)
T 3mvs_A 151 -PSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDM 209 (210)
T ss_dssp -CCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCC
T ss_pred -CCCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCC
Confidence 35799999999999999999999999999999999998 46899999999999999996
No 16
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.9e-38 Score=332.84 Aligned_cols=206 Identities=37% Similarity=0.541 Sum_probs=193.1
Q ss_pred CCCCccccCcEE--EEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEE
Q psy1041 746 VHVPEFFSFPIE--LQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYT 823 (1095)
Q Consensus 746 d~~P~f~~~~~~--~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~ 823 (1095)
+++|.|.+..|. +.|+|++++|+.|+++.|+|+|. +.++|+|.+++..++|.|++.+|.|++.++||||....|.
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~ 79 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFT 79 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEE
Confidence 589999887775 79999999999999999999994 5689999877666899999999999999999999999999
Q ss_pred EEEEEEECCCCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCcceE
Q psy1041 824 LNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFA 903 (1095)
Q Consensus 824 l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~~~F~ 903 (1095)
|+|+|+|++. ..++.|.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++++|+|+|.|.|+.++|+|.++.+.|.
T Consensus 80 l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~F~ 156 (210)
T 3mvs_A 80 VEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFA 156 (210)
T ss_dssp EEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSSEE
T ss_pred EEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCCEE
Confidence 9999999876 3567899999999999999999999999999999999999999999999999999999998889999
Q ss_pred EeCCcceEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCC
Q psy1041 904 VDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNA 960 (1095)
Q Consensus 904 Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~ 960 (1095)
|++.+|.|++.++||||....|.|+|+|+|+++ .++++++++|+|+|.|+|||+
T Consensus 157 Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~---~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 157 IDSARGIVTVIQELDYEVTQAYQLTVNATDQDK---TRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp ECTTTCEEEECSCCCTTTCSEEEEEEEEEECCS---SSCCEEEEEEEEEEECCCCCC
T ss_pred EeCCcEEEEECCcCCCcccceEEEEEEEEECCC---CCCCEEEEEEEEEEEccCCCC
Confidence 999999999999999999999999999999985 467899999999999999975
No 17
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=6.4e-38 Score=330.14 Aligned_cols=203 Identities=29% Similarity=0.466 Sum_probs=181.6
Q ss_pred EEEEEecCC--CCCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECCC
Q psy1041 756 IELQVNESV--PLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGK 833 (1095)
Q Consensus 756 ~~~~v~E~~--~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~ 833 (1095)
+.+.|.|+. |.|+.|+++ |+|+|.| |+.++|+|.+++...+|.|++.+|.|++.++||||....|.|+|+|+|+|.
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 83 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDT 83 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCC
Confidence 467899994 678989888 8999998 899999999876667999999999999999999999999999999999986
Q ss_pred -CCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCC---CCCceEEEEecCCCcceEEeCCcc
Q psy1041 834 -PQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDL---GDNAKVVYSLMTDTQDFAVDSATG 909 (1095)
Q Consensus 834 -p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---g~n~~v~Ysl~~~~~~F~Id~~tG 909 (1095)
+++++++.|.|+|.|+|||+|.|.+..|.++|+|+++.|+.|++|+|+|+|. |.|+.++|+|.++...|.|++.+|
T Consensus 84 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG 163 (215)
T 2a4e_A 84 NRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTG 163 (215)
T ss_dssp CCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEESTTTEEECTTTC
T ss_pred CCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCCCcEEEeCCcc
Confidence 6678889999999999999999999999999999999999999999999997 889999999999889999999999
Q ss_pred eEEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCe
Q psy1041 910 SLYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPN 962 (1095)
Q Consensus 910 ~i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~ 962 (1095)
.|+++ ++||||....|.|+|+|+|++++ .++++++++|+|+|.|+|||+|+
T Consensus 164 ~I~~~~~~LD~E~~~~y~l~V~A~D~g~~--~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 164 IIRTALPNMDREAKEEYHVVIQAKDMGGH--MGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEECSSCCCSSSCSEEEEEEEEETTTTC--TTCCEEEEEEEEEEEC-------
T ss_pred EEEEcccCCCcccCCEEEEEEEEEECCCC--CCCceeEEEEEEEEEECCCCCCC
Confidence 99999 99999999999999999999842 23589999999999999999995
No 18
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2.4e-37 Score=325.80 Aligned_cols=201 Identities=29% Similarity=0.442 Sum_probs=180.3
Q ss_pred ceEEEEecCC--CCCeEEEEEEEEeCCCCCCceEEEEecCCC--cceEEeCCcceEEEcccccccccCeeEEEEEEEeCC
Q psy1041 860 LASFRVTENA--LNGTVIFKVNATDLDLGDNAKVVYSLMTDT--QDFAVDSATGSLYVSASLDRERQDLYELKIRASDCD 935 (1095)
Q Consensus 860 ~y~~~V~En~--~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~--~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~ 935 (1095)
.|.+.|.||. +.|+.|+++ |+|+|.| |+.++|+|.++. ..|.||+.+|.|++.++||||....|.|+|+|+|++
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 82 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRD 82 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECC
Confidence 4788999994 579999988 8999998 789999998764 689999999999999999999999999999999987
Q ss_pred CCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCC---CCCceEEEEEEeCCCCCCCE
Q psy1041 936 GRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDL---GQGGVVRYTIVSDNEADDVF 1012 (1095)
Q Consensus 936 g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~v~Y~i~~~~~~~~~F 1012 (1095)
+ .+++++.+.|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|. |.|+.++|+|..+ ...|
T Consensus 83 ~---~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~---~~~F 156 (215)
T 2a4e_A 83 T---NRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEG---QPYF 156 (215)
T ss_dssp T---CCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEES---TTTE
T ss_pred C---CCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCC---CCcE
Confidence 4 24688899999999999999999999999999999999999999999999997 8899999999983 4689
Q ss_pred EEeCCceEEEEc-ccCCCCCCCEEEEEEEEEECCCC--CceeEEEEEEEEEecCCCCCCCe
Q psy1041 1013 SIDRLTGTIRVA-KPLDFEKRQVHSLVVRAKDNGSP--PLYSEATLIVEVSDVNENMNAPV 1070 (1095)
Q Consensus 1013 ~Id~~tG~i~~~-~~ld~E~~~~~~l~V~A~D~g~p--~ls~~~~v~I~V~dvNdn~~~P~ 1070 (1095)
.|++.+|.|+++ ++||||....|.|+|+|+|+|.| +++++++|+|+|.|+||| +|+
T Consensus 157 ~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn--~P~ 215 (215)
T 2a4e_A 157 SVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKD--DDK 215 (215)
T ss_dssp EECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC---------
T ss_pred EEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCC--CCC
Confidence 999999999999 99999999999999999999987 699999999999999998 884
No 19
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=347.24 Aligned_cols=211 Identities=20% Similarity=0.144 Sum_probs=188.9
Q ss_pred ccccCcEEEEEecCCCCCcEEEEEEEEeCCCCC--CcEEE------EEEEeCCCCCcEEEeCCceEEEEcccCCccCCCE
Q psy1041 750 EFFSFPIELQVNESVPLKSTLTKIIARDRDLGY--NGKLV------FGISSGDNDSVFRIDPDSGELKVVGYLDRERTSE 821 (1095)
Q Consensus 750 ~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~--n~~v~------y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~ 821 (1095)
.|.+..|.+.|+|++++|+.|++|.|+|+|.|. +.++. |+|..+ ...+|.|++.||+|++.++||||....
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~ 80 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSWEK 80 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEEEESSCBCHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEEEECCcCChhHhhh
Confidence 477888999999999999999999999999853 55565 666554 457999999999999999999999999
Q ss_pred E------------EEEEEEEECCCC--CCceeEEEEEEEEecCCCCCc----------ccccceEEEEecCCCCCeEEEE
Q psy1041 822 Y------------TLNITVYDLGKP--QKSTSKMLPITILDVNDNPPK----------FEKSLASFRVTENALNGTVIFK 877 (1095)
Q Consensus 822 y------------~l~V~a~D~g~p--~~s~~~~v~I~V~DvNDn~P~----------F~~~~y~~~V~En~~~gt~v~~ 877 (1095)
| .|+|.|+|+|.| ++++++.|.|+|.|+|||+|+ |.+..|.+.|+||.++|+.|++
T Consensus 81 y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~ 160 (246)
T 2x2u_A 81 LSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQF 160 (246)
T ss_dssp HHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEEC
T ss_pred hccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEE
Confidence 9 999999999988 678889999999999999999 9999999999999999999999
Q ss_pred EEEEeCCCCCCceEEEEecCC-CcceEEeCCcceEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEecc
Q psy1041 878 VNATDLDLGDNAKVVYSLMTD-TQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDI 956 (1095)
Q Consensus 878 v~A~D~D~g~n~~v~Ysl~~~-~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~Dv 956 (1095)
|+|+|+|.|.|+.++|+|.++ ...|.|++.+|.|++.++||||....|.|+|.|+|..| .++++++++|.|+|.|+
T Consensus 161 v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg---~p~~ss~~~v~I~V~Dv 237 (246)
T 2x2u_A 161 RLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAG---AREEVVMVPFPVTVYDE 237 (246)
T ss_dssp SCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC------CCEEEEEEEEEEEECS
T ss_pred EEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCC---CCcceEEEEEEEEEEEe
Confidence 999999999999999999988 48999999999999999999999999999999999544 36799999999999999
Q ss_pred CCCCCeee
Q psy1041 957 NDNAPNFA 964 (1095)
Q Consensus 957 NDn~P~f~ 964 (1095)
|||+|.|.
T Consensus 238 NDn~P~F~ 245 (246)
T 2x2u_A 238 DDSAPEFE 245 (246)
T ss_dssp SCCSCCCC
T ss_pred CCCCCccC
Confidence 99999996
No 20
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=347.37 Aligned_cols=212 Identities=21% Similarity=0.183 Sum_probs=187.8
Q ss_pred cccccceEEEEecCCCCCeEEEEEEEEeCCCCC--CceEE------EEecCC-CcceEEeCCcceEEEcccccccccCee
Q psy1041 855 KFEKSLASFRVTENALNGTVIFKVNATDLDLGD--NAKVV------YSLMTD-TQDFAVDSATGSLYVSASLDRERQDLY 925 (1095)
Q Consensus 855 ~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~--n~~v~------Ysl~~~-~~~F~Id~~tG~i~~~~~LD~E~~~~y 925 (1095)
.|.+..|.++|+|++++|+.|++|+|+|+|.|. +..+. |++..+ ..+|.||+.||.|++.++||||....|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 81 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL 81 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence 588999999999999999999999999999864 44554 555443 489999999999999999999999999
Q ss_pred ------------EEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCe----------eecCceEEEEeCCCCCCcEEE
Q psy1041 926 ------------ELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPN----------FALPNYSVKVREDIPVGTVVA 983 (1095)
Q Consensus 926 ------------~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~----------f~~~~y~~~v~E~~~~g~~v~ 983 (1095)
.|+|.|+|++++ ..++++++.|.|+|.|+|||+|+ |.+..|.+.|.|+.++|+.|+
T Consensus 82 ~~~~~G~p~~~~~l~V~a~D~g~~--~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~ 159 (246)
T 2x2u_A 82 SVRNRGFPLLTVYLKVFLSPTSLR--EGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQ 159 (246)
T ss_dssp HHTSTTSCCCEEEEEEECC---------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEE
T ss_pred ccccCCCcccceEEEEEEEcCCCC--CCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEE
Confidence 999999999842 12577889999999999999999 999999999999999999999
Q ss_pred EEEEEcCCCCCCceEEEEEEeCCCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEE-CCCCCceeEEEEEEEEEec
Q psy1041 984 ILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKD-NGSPPLYSEATLIVEVSDV 1062 (1095)
Q Consensus 984 ~v~A~D~D~g~n~~v~Y~i~~~~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D-~g~p~ls~~~~v~I~V~dv 1062 (1095)
+|.|+|+|.|.|+.|+|+|..++ ...|.|++.+|+|++.++||||.+..|.|+|.|+| .|+|+++++++|.|+|.|+
T Consensus 160 ~v~A~D~D~g~n~~i~Y~i~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~Dv 237 (246)
T 2x2u_A 160 FRLLPVQFLCPQISVAYRLLEGE--GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDE 237 (246)
T ss_dssp CSCHHHHHHCTTSCEEEEEESCT--TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECS
T ss_pred EEEEEcCCCCCCcEEEEEEccCC--CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEe
Confidence 99999999999999999999842 67999999999999999999999999999999998 6779999999999999999
Q ss_pred CCCCCCCeee
Q psy1041 1063 NENMNAPVFS 1072 (1095)
Q Consensus 1063 Ndn~~~P~F~ 1072 (1095)
||| +|+|.
T Consensus 238 NDn--~P~F~ 245 (246)
T 2x2u_A 238 DDS--APEFE 245 (246)
T ss_dssp SCC--SCCCC
T ss_pred CCC--CCccC
Confidence 998 99996
No 21
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=6.8e-35 Score=307.57 Aligned_cols=195 Identities=29% Similarity=0.389 Sum_probs=181.3
Q ss_pred EEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCC------CcceEEeCCcceEEEcccccccccCeeEEEEEEEeCC
Q psy1041 862 SFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTD------TQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCD 935 (1095)
Q Consensus 862 ~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~------~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~ 935 (1095)
.++|+||++ |+.++++.|.|.|.+.|+.++|+|.++ .+.|.|++.+|.|++.++||||....|.|+|+|+|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 578999998 888899999999999999999999875 2689999999999999999999999999999999998
Q ss_pred CCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCC--CCCceEEEEEEeCCC---CCC
Q psy1041 936 GRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDL--GQGGVVRYTIVSDNE---ADD 1010 (1095)
Q Consensus 936 g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~--g~n~~v~Y~i~~~~~---~~~ 1010 (1095)
.+++++++.|+|+|.|+|||+|.|.+..|.+.|.|++++|+.|++|.|+|+|. |.|+.++|+|..++. ..+
T Consensus 85 ----~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~ 160 (215)
T 2qvi_A 85 ----GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPN 160 (215)
T ss_dssp ----TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTT
T ss_pred ----CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCC
Confidence 45688999999999999999999999999999999999999999999999998 789999999998542 367
Q ss_pred CEEEeCCceEEEEc-ccCCCCCCCEEEEEEEEEECCCC---CceeEEEEEEEEEe
Q psy1041 1011 VFSIDRLTGTIRVA-KPLDFEKRQVHSLVVRAKDNGSP---PLYSEATLIVEVSD 1061 (1095)
Q Consensus 1011 ~F~Id~~tG~i~~~-~~ld~E~~~~~~l~V~A~D~g~p---~ls~~~~v~I~V~d 1061 (1095)
.|.|++.+|.|++. ++||||....|.|+|+|+|+|+| +++++++|.|+|.|
T Consensus 161 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 161 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp CEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred eEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 99999999999995 79999999999999999999888 79999999999986
No 22
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=4.8e-34 Score=298.48 Aligned_cols=191 Identities=26% Similarity=0.440 Sum_probs=179.6
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECCCC
Q psy1041 757 ELQVNESVPLK--STLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKP 834 (1095)
Q Consensus 757 ~~~v~E~~~~g--~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~p 834 (1095)
.+.|+||.+.| ..|+++. +|+|.|.| +|+|.+++..++|.|++.||.|++.++||||....|.|+|+|+|+|.|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~ 81 (203)
T 3ppe_A 6 RMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNN 81 (203)
T ss_dssp EEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTT
T ss_pred cEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCC
Confidence 57899999988 8889988 99999866 999998888889999999999999999999999999999999999987
Q ss_pred -CCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCC---CCCCceEEEEecCCCcceEEeCCcce
Q psy1041 835 -QKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLD---LGDNAKVVYSLMTDTQDFAVDSATGS 910 (1095)
Q Consensus 835 -~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D---~g~n~~v~Ysl~~~~~~F~Id~~tG~ 910 (1095)
++++++.|.|.|.|+|||+|.|.+..|.+.|+||.++|+.|++|+|+|+| .|.|+.++|+|.+++..|.|+ .+|.
T Consensus 82 ~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~I~-~tG~ 160 (203)
T 3ppe_A 82 RSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNEYFTVD-DSGV 160 (203)
T ss_dssp EECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTTTEEEC-TTSE
T ss_pred CcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCCcEEEe-CCeE
Confidence 67888999999999999999999999999999999999999999999999 588999999999998999999 9999
Q ss_pred EEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEec
Q psy1041 911 LYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955 (1095)
Q Consensus 911 i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~D 955 (1095)
|++. ++||||....|.|.|+|+|++| .++++++++|+|+|.|
T Consensus 161 i~~~~~~LD~E~~~~y~l~V~A~D~~G---~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 161 IFTARADLDRESQSAYEIIVKAKDALG---LTGESSTATVIIRLTD 203 (203)
T ss_dssp EEESCSCCCTTTCSEEEEEEEEEETTC---CCCSSSEEEEEEEEEC
T ss_pred EEECCcCCCcccCCEEEEEEEEEeCCC---CCCCeEEEEEEEEEEC
Confidence 9999 9999999999999999999865 5668999999999987
No 23
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2e-34 Score=304.08 Aligned_cols=197 Identities=27% Similarity=0.422 Sum_probs=181.6
Q ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCC----CCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECC
Q psy1041 757 ELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGD----NDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLG 832 (1095)
Q Consensus 757 ~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~----~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g 832 (1095)
.++|+||.+ |+.++++.|.|.|.+.|+.++|+|.+++ ..++|.|++.+|.|++.++||||....|.|+|+|+|.|
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 468999999 8888999999999999999999999754 35799999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCC--CCCceEEEEecCCC------cceEE
Q psy1041 833 KPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDL--GDNAKVVYSLMTDT------QDFAV 904 (1095)
Q Consensus 833 ~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~--g~n~~v~Ysl~~~~------~~F~I 904 (1095)
.|++++++.|.|+|.|+|||+|+|.+..|.+.|+||+++|+.|++|+|+|+|. |.|+.++|+|.++. +.|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999998 78999999998753 78999
Q ss_pred eCCcceEEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEec
Q psy1041 905 DSATGSLYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955 (1095)
Q Consensus 905 d~~tG~i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~D 955 (1095)
++.+|.|++. ++||||....|.|.|+|+|+++++ ..+++++++|+|+|.|
T Consensus 165 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p-~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 165 NNETGDIITVAAGLDREKVQQYTLIIQATDMEGNP-TYGLSNTATAVITVTD 215 (215)
T ss_dssp CTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCT-TTSCCCEEEEEEEECC
T ss_pred cCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCC-CCCcceEEEEEEEEEC
Confidence 9999999995 899999999999999999998521 1168999999999987
No 24
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=6.8e-34 Score=300.38 Aligned_cols=194 Identities=31% Similarity=0.408 Sum_probs=178.3
Q ss_pred eEEEEecCCC--CCeEEEEEEEEeCCCCCCceEEEEecCCC------cceEEeCCcceEEEcccccccccCeeEEEEEEE
Q psy1041 861 ASFRVTENAL--NGTVIFKVNATDLDLGDNAKVVYSLMTDT------QDFAVDSATGSLYVSASLDRERQDLYELKIRAS 932 (1095)
Q Consensus 861 y~~~V~En~~--~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~------~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~ 932 (1095)
..++|+||.+ .|+.|+++.| |.|. |+.++|+|.+.. +.|.|++.+|.|++.++||||....|.|+|+|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAV 81 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEE
Confidence 4789999998 6888999999 7775 889999998742 489999999999999999999999999999999
Q ss_pred eCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCC---CCceEEEEEEeCCC--
Q psy1041 933 DCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLG---QGGVVRYTIVSDNE-- 1007 (1095)
Q Consensus 933 D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~v~Y~i~~~~~-- 1007 (1095)
|+++ +++++++.|+|+|.|+|||+|.|.+..|.+.|.|++++|+.|++|.|+|+|.| .|+.++|+|..+..
T Consensus 82 D~~~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~ 157 (213)
T 3qrb_A 82 SSNG----EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPEL 157 (213)
T ss_dssp ETTS----CBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCC
T ss_pred eCCC----CcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCC
Confidence 9884 56788899999999999999999999999999999999999999999999999 89999999987432
Q ss_pred -CCCCEEEeCCceEEEEc-ccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEe
Q psy1041 1008 -ADDVFSIDRLTGTIRVA-KPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1008 -~~~~F~Id~~tG~i~~~-~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~d 1061 (1095)
..+.|.|++.+|.|++. ++||||....|.|+|+|+|.|.|+++++++|+|+|.|
T Consensus 158 ~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 158 PHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp SCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred CcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 35789999999999997 7999999999999999999999999999999999987
No 25
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.6e-33 Score=294.57 Aligned_cols=190 Identities=28% Similarity=0.415 Sum_probs=176.1
Q ss_pred eEEEEecCCCCC--eEEEEEEEEeCCCCCCceEEEEecCCC--cceEEeCCcceEEEcccccccccCeeEEEEEEEeCCC
Q psy1041 861 ASFRVTENALNG--TVIFKVNATDLDLGDNAKVVYSLMTDT--QDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDG 936 (1095)
Q Consensus 861 y~~~V~En~~~g--t~v~~v~A~D~D~g~n~~v~Ysl~~~~--~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g 936 (1095)
..++|+||.+.| ..|+++. +|+|.|.+ +|+|.+++ +.|.|++.+|.|++.++||||....|.|+|+|+|+++
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 80 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRN 80 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTT
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCC
Confidence 578999999988 8889998 99998875 99999765 5899999999999999999999999999999999984
Q ss_pred CCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCC---CCCCceEEEEEEeCCCCCCCEE
Q psy1041 937 RNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPD---LGQGGVVRYTIVSDNEADDVFS 1013 (1095)
Q Consensus 937 ~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D---~g~n~~v~Y~i~~~~~~~~~F~ 1013 (1095)
.+++++.+.|+|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+| .|.|+.++|+|.++ ...|.
T Consensus 81 ---~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~---~~~F~ 154 (203)
T 3ppe_A 81 ---NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKG---NEYFT 154 (203)
T ss_dssp ---TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEES---TTTEE
T ss_pred ---CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCC---CCcEE
Confidence 2357888999999999999999999999999999999999999999999999 58899999999983 45899
Q ss_pred EeCCceEEEEc-ccCCCCCCCEEEEEEEEEEC-CCCCceeEEEEEEEEEe
Q psy1041 1014 IDRLTGTIRVA-KPLDFEKRQVHSLVVRAKDN-GSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1014 Id~~tG~i~~~-~~ld~E~~~~~~l~V~A~D~-g~p~ls~~~~v~I~V~d 1061 (1095)
|+ .+|.|+++ ++||||....|.|+|+|+|+ |.|+++++++|.|+|.|
T Consensus 155 I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 155 VD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred Ee-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 99 99999999 99999999999999999998 78889999999999986
No 26
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=8.9e-34 Score=299.50 Aligned_cols=192 Identities=31% Similarity=0.427 Sum_probs=178.1
Q ss_pred EEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEEeC----CCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEE
Q psy1041 757 ELQVNESVP--LKSTLTKIIARDRDLGYNGKLVFGISSG----DNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYD 830 (1095)
Q Consensus 757 ~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~y~i~~g----~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 830 (1095)
.++|+||.+ .++.|+++.| |.|. |+.++|+|.++ +..++|.|++.+|.|++.++||||....|.|+|+|+|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVS 82 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEe
Confidence 579999998 6788999999 7775 89999999974 3446999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCC---CCceEEEEecCC------Ccc
Q psy1041 831 LGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLG---DNAKVVYSLMTD------TQD 901 (1095)
Q Consensus 831 ~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g---~n~~v~Ysl~~~------~~~ 901 (1095)
.|.|++++++.|.|+|.|+|||+|.|.+..|.+.|+||+++|+.|++|+|+|+|.| .|+.++|+|.++ ...
T Consensus 83 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~ 162 (213)
T 3qrb_A 83 SNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNM 162 (213)
T ss_dssp TTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCS
T ss_pred CCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCe
Confidence 99999999999999999999999999999999999999999999999999999999 899999999864 268
Q ss_pred eEEeCCcceEEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEec
Q psy1041 902 FAVDSATGSLYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955 (1095)
Q Consensus 902 F~Id~~tG~i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~D 955 (1095)
|.|++.+|.|++. ++||||....|.|.|+|+|++ .++++++++|+|+|.|
T Consensus 163 F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g----~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 163 FTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQ----GEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGG----GTSCEEEEEEEEEEEC
T ss_pred EEEECCCcEEEEccCCCCCccCceEEEEEEEEeCC----CCCceEEEEEEEEEEC
Confidence 9999999999997 899999999999999999988 4579999999999987
No 27
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=2.5e-34 Score=302.07 Aligned_cols=192 Identities=30% Similarity=0.447 Sum_probs=171.1
Q ss_pred EEEEecCCCCC--eEEEEEEEEeCCCCCCceEEEEecCCC--cceEEeCCcceEEEcccccccccCeeEEEEEEEeCCCC
Q psy1041 862 SFRVTENALNG--TVIFKVNATDLDLGDNAKVVYSLMTDT--QDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGR 937 (1095)
Q Consensus 862 ~~~V~En~~~g--t~v~~v~A~D~D~g~n~~v~Ysl~~~~--~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g~ 937 (1095)
.+.|+||.+.+ +.|+++ |+|+|.| ++.++|+|.+++ +.|.|++.+|.|++.++||||....|.|+|+|+|+++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~- 82 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRT- 82 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSS-
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCC-
Confidence 57799999855 588888 8999998 678999998765 5899999999999999999999999999999999874
Q ss_pred CCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCC---CCCceEEEEEEeCCCCCCCEEE
Q psy1041 938 NDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDL---GQGGVVRYTIVSDNEADDVFSI 1014 (1095)
Q Consensus 938 ~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~v~Y~i~~~~~~~~~F~I 1014 (1095)
.+++++++.|.|+|.|+|||+|.|.+..|.+.|.|++++|+.|++|.|+|+|. |.|+.++|+|..+ ...|.|
T Consensus 83 --~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~---~~~F~I 157 (207)
T 3lnd_A 83 --GRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG---QPYFSV 157 (207)
T ss_dssp --CCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES---GGGEEE
T ss_pred --CCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC---CCCEEE
Confidence 34578889999999999999999999999999999999999999999999998 8899999999983 458999
Q ss_pred eCCceEEEEc-ccCCCCCCCEEEEEEEEEECCCC--CceeEEEEEEEEEe
Q psy1041 1015 DRLTGTIRVA-KPLDFEKRQVHSLVVRAKDNGSP--PLYSEATLIVEVSD 1061 (1095)
Q Consensus 1015 d~~tG~i~~~-~~ld~E~~~~~~l~V~A~D~g~p--~ls~~~~v~I~V~d 1061 (1095)
++.+|.|+++ ++||||....|.|+|+|+|+|.| +++++++|+|+|.|
T Consensus 158 d~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 158 ESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp CTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred cCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 9999999999 99999999999999999999987 89999999999986
No 28
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=2.1e-34 Score=302.69 Aligned_cols=195 Identities=31% Similarity=0.475 Sum_probs=173.9
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECC-C
Q psy1041 757 ELQVNESVPLK--STLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLG-K 833 (1095)
Q Consensus 757 ~~~v~E~~~~g--~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g-~ 833 (1095)
.+.|.|+.+.+ ..|+++ |+|+|.| |+.++|+|.+++..++|.|++.+|.|++.++||||....|.|+|+|+|+| .
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 83 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTG 83 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSC
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCC
Confidence 36899998855 578888 8999999 78899999877766799999999999999999999999999999999988 4
Q ss_pred CCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCC---CCCceEEEEecCCCcceEEeCCcce
Q psy1041 834 PQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDL---GDNAKVVYSLMTDTQDFAVDSATGS 910 (1095)
Q Consensus 834 p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---g~n~~v~Ysl~~~~~~F~Id~~tG~ 910 (1095)
|++++++.|.|+|.|+|||+|.|.+..|.+.|+||++.|+.|++++|+|+|. |.|+.++|+|.++...|.|++.+|.
T Consensus 84 ~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~Id~~tG~ 163 (207)
T 3lnd_A 84 RPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESETGI 163 (207)
T ss_dssp CCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGGGEEECTTTCE
T ss_pred CccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCCCEEEcCCCcE
Confidence 7788889999999999999999999999999999999999999999999998 8899999999998899999999999
Q ss_pred EEEc-ccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEec
Q psy1041 911 LYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955 (1095)
Q Consensus 911 i~~~-~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~D 955 (1095)
|++. ++||||....|.|.|+|+|++++ .++++++++|+|+|.|
T Consensus 164 i~~~~~~lD~E~~~~y~l~V~A~D~g~~--~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 164 IKTALLNMDRENREQYQVVIQAKDMGGQ--MGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEECCSSCCC--CCEEEEEEEEESGGGC--TTCBEEEEEEEEEEEC
T ss_pred EEECcccCCcccCCEEEEEEEEEECCCC--CCCcEeEEEEEEEEeC
Confidence 9999 99999999999999999999842 2368999999999987
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.7e-33 Score=298.58 Aligned_cols=193 Identities=28% Similarity=0.358 Sum_probs=176.6
Q ss_pred eEEEEecCCCCC--eEEEEEEEEeCCCCCCceEEEEecCC------CcceEEeCCcceEEEcccccccccCeeEEEEEEE
Q psy1041 861 ASFRVTENALNG--TVIFKVNATDLDLGDNAKVVYSLMTD------TQDFAVDSATGSLYVSASLDRERQDLYELKIRAS 932 (1095)
Q Consensus 861 y~~~V~En~~~g--t~v~~v~A~D~D~g~n~~v~Ysl~~~------~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~ 932 (1095)
..++|+||.+.| +.++++.|+|+|. .++|+|.+. .+.|.|++.+|.|++.++||||....|.|+|+|+
T Consensus 6 ~~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (218)
T 3k5r_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (218)
T ss_dssp CCEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CcEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEE
Confidence 368899999998 8899999998875 689999743 2789999999999999999999999999999999
Q ss_pred eCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCC--CCCceEEEEEEeCCCC--
Q psy1041 933 DCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDL--GQGGVVRYTIVSDNEA-- 1008 (1095)
Q Consensus 933 D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~--g~n~~v~Y~i~~~~~~-- 1008 (1095)
|++ .+++++++.|+|+|.|+|||+|.|.+..|.+.|.|++++|+.|++|.|+|+|. |.|+.++|+|.++...
T Consensus 82 D~g----~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~ 157 (218)
T 3k5r_A 82 DAS----GKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKP 157 (218)
T ss_dssp CSS----SCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCS
T ss_pred ECC----CCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCC
Confidence 987 45788999999999999999999999999999999999999999999999999 7899999999874332
Q ss_pred -CCCEEEeCCceEEEEc---ccCCCCC--CCEEEEEEEEEECC--CCCceeEEEEEEEEEe
Q psy1041 1009 -DDVFSIDRLTGTIRVA---KPLDFEK--RQVHSLVVRAKDNG--SPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1009 -~~~F~Id~~tG~i~~~---~~ld~E~--~~~~~l~V~A~D~g--~p~ls~~~~v~I~V~d 1061 (1095)
.+.|.||+.+|.|++. ++||||. +..|.|+|+|+|+| .|+++++++|+|+|.|
T Consensus 158 ~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 158 SPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp CSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred cCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 2689999999999987 6999999 77999999999999 8899999999999986
No 30
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=4.5e-33 Score=295.22 Aligned_cols=193 Identities=30% Similarity=0.416 Sum_probs=176.9
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEEeC----CCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEE
Q psy1041 757 ELQVNESVPLK--STLTKIIARDRDLGYNGKLVFGISSG----DNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYD 830 (1095)
Q Consensus 757 ~~~v~E~~~~g--~~v~~v~A~D~D~g~n~~v~y~i~~g----~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 830 (1095)
.+.|+||.+.| ..++++.|+|+|. .++|+|.++ +..++|.|++.+|.|++.++||||....|.|+|+|+|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEE
Confidence 46899999998 8889999998875 789999753 4458999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCC--CCCceEEEEecCCC------cce
Q psy1041 831 LGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDL--GDNAKVVYSLMTDT------QDF 902 (1095)
Q Consensus 831 ~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~--g~n~~v~Ysl~~~~------~~F 902 (1095)
.|.|++++++.|.|.|.|+|||+|.|.+..|.+.|+||++.|+.|++|+|+|+|. |.|+.++|+|.++. +.|
T Consensus 83 ~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F 162 (218)
T 3k5r_A 83 ASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMF 162 (218)
T ss_dssp SSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSE
T ss_pred CCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEE
Confidence 9999999999999999999999999999999999999999999999999999999 78999999998754 569
Q ss_pred EEeCCcceEEEc---ccccccc--cCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEec
Q psy1041 903 AVDSATGSLYVS---ASLDRER--QDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955 (1095)
Q Consensus 903 ~Id~~tG~i~~~---~~LD~E~--~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~D 955 (1095)
.||+.+|.|++. ++||||. ...|.|.|+|+|++|. .++++++++|+|+|.|
T Consensus 163 ~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~--~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 163 YIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGL--DVGLTGTATATIVIDD 218 (218)
T ss_dssp EECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSST--TTTCEEEEEEEEEEEC
T ss_pred EEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCC--CCCeeEEEEEEEEEEC
Confidence 999999999987 7999999 7799999999999852 4578999999999987
No 31
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=7.5e-30 Score=272.59 Aligned_cols=201 Identities=25% Similarity=0.362 Sum_probs=169.7
Q ss_pred cceEEEEecCCCCCeEEEEEEE-EeCCCCCCceEEEEecCCC-cceEEeCCcceEEEc---ccccccccCeeEEEEEEEe
Q psy1041 859 SLASFRVTENALNGTVIFKVNA-TDLDLGDNAKVVYSLMTDT-QDFAVDSATGSLYVS---ASLDRERQDLYELKIRASD 933 (1095)
Q Consensus 859 ~~y~~~V~En~~~gt~v~~v~A-~D~D~g~n~~v~Ysl~~~~-~~F~Id~~tG~i~~~---~~LD~E~~~~y~l~V~A~D 933 (1095)
+.|.++|+|+++.|+.+..+.+ .|.|.+.|+.++|+|.+.. .+|.|++.+|.+++. +.||||....|.+.+.+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~ 99 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQ 99 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEE
Confidence 3567899999999999876544 5556678899999998765 789999999999875 6799999887776665555
Q ss_pred CCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEE-----EEEEcCCCCCCceEEEEEEeCCCC
Q psy1041 934 CDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAI-----LSASDPDLGQGGVVRYTIVSDNEA 1008 (1095)
Q Consensus 934 ~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~-----v~A~D~D~g~n~~v~Y~i~~~~~~ 1008 (1095)
+..+ .....+.+.|+|.|.|+|||+|+|.+..|.+.|.|++++|+.|.+ |.|+|+|.|.||.|+|+|..+...
T Consensus 100 ~~~~--~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~ 177 (242)
T 4apx_B 100 CVNK--KVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPED 177 (242)
T ss_dssp EEET--TTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTS
T ss_pred eECC--CCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCC
Confidence 3311 123566788999999999999999999999999999999999976 789999999999999999975332
Q ss_pred ---CCCEEEeC-CceEEEEcccCCCCCCCEEEEEEEEEECCCC---CceeEEEEEEEEEe
Q psy1041 1009 ---DDVFSIDR-LTGTIRVAKPLDFEKRQVHSLVVRAKDNGSP---PLYSEATLIVEVSD 1061 (1095)
Q Consensus 1009 ---~~~F~Id~-~tG~i~~~~~ld~E~~~~~~l~V~A~D~g~p---~ls~~~~v~I~V~d 1061 (1095)
.+.|.||+ .||.|+++++||||....|.|+|+|+|+|.| ++++.+.|+|+|.-
T Consensus 178 ~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 178 PTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp TTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred cccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 24699995 5999999999999999999999999999998 48889999999863
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.96 E-value=4.7e-29 Score=266.44 Aligned_cols=201 Identities=24% Similarity=0.319 Sum_probs=168.2
Q ss_pred CcEEEEEeCCCCCCceEEEEEEe-eCCCCCCceEEEEEEeCCCCCcEEEECCccEEEEc---eecCcccccEEEEEEEEE
Q psy1041 382 EIYEVDVPETTPVNTPIIRLKVS-DADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTA---VTLDAEDKAFYTLTVSAI 457 (1095)
Q Consensus 382 ~~~~~~v~E~~~~g~~v~~v~a~-D~D~g~n~~i~ysi~~~~~~~~F~Id~~tG~i~~~---~~LD~E~~~~y~l~V~a~ 457 (1095)
+.|.++|+|++++|+.+..+.+. |.|.|.|+.++|+|.+ +...+|.|++.+|.+++. +.||||....|.+.+.+.
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~-~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v 98 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD-NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQV 98 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES-CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec-CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEE
Confidence 35778999999999998765554 5556889999999986 446799999999999885 569999887666555554
Q ss_pred eCCCCCCceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEEE-----EEEeeCCCCCCceEEEEEecCCC--
Q psy1041 458 DQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIK-----VTAKDKDSGENAYISYSIANLKP-- 530 (1095)
Q Consensus 458 D~g~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~-----v~A~D~D~g~n~~i~ysi~~~~~-- 530 (1095)
+.+.+..+..+.+.|+|.|.|+|||+|+|.+..|.++|+||+++|+.|++ +.|+|+|.|.|++|+|+|..+..
T Consensus 99 ~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~ 178 (242)
T 4apx_B 99 QCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDP 178 (242)
T ss_dssp EEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTST
T ss_pred EeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCc
Confidence 44333334567788999999999999999999999999999999999976 78999999999999999987643
Q ss_pred ---CCcEEec-ccceEEEceeccccccccEEEEEEEEEECCcCC--ceeeEEEEEEEEEe
Q psy1041 531 ---VPFEIDH-FSGVIKTTQVLDYESMRREYILRVRASDWGLPY--RRQTEMQLKIKLLD 584 (1095)
Q Consensus 531 ---~~F~Id~-~tG~i~~~~~lD~E~~~~~~~l~V~a~D~g~p~--~~s~~~~v~I~V~d 584 (1095)
..|.|++ .+|.|++.+.||||. ...|.|.|+|+|+|.|+ ++++.+.|+|+|.-
T Consensus 179 ~~~~~F~Id~~~tG~i~~~~~LD~E~-~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 179 TSNDTFEIPLMLTGNVVLRKRLNYED-KTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp THHHHEECSSTTTCCEEECSCCCTTT-CCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred ccccceEEcCCCceEEEECCcCChhh-CCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 2599995 599999999999998 57899999999999876 45677889998874
No 33
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=7.2e-26 Score=215.07 Aligned_cols=117 Identities=29% Similarity=0.489 Sum_probs=109.8
Q ss_pred EEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCCCC-CCCEEEeCCceEEEEcccCCC
Q psy1041 951 VTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEA-DDVFSIDRLTGTIRVAKPLDF 1029 (1095)
Q Consensus 951 I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~-~~~F~Id~~tG~i~~~~~ld~ 1029 (1095)
++|.|+|||+|+|.+..|.+.|.|++++|+.|++|.|+|+|.|.|+.|+|+|..+... ..+|.|++.+|.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 5789999999999999999999999999999999999999999999999999874321 368999999999999999999
Q ss_pred CCCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCC
Q psy1041 1030 EKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAP 1069 (1095)
Q Consensus 1030 E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P 1069 (1095)
|....|.|+|+|+|+|.|+++++++|.|+|.|+||| +|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn--~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDN--VP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTC--CC
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCC--CC
Confidence 999999999999999999999999999999999998 76
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=1.2e-25 Score=213.45 Aligned_cols=114 Identities=26% Similarity=0.389 Sum_probs=108.2
Q ss_pred EEEecCCCCCCCCCCCceEEEeeCCCCCCcEEEEEEeeeCCCCCCeEEEEEEecCC----ccEEEEccccEEEEccCCCc
Q psy1041 146 VNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMN----EQFSIHPTSGVVTLTRPLKY 221 (1095)
Q Consensus 146 I~V~D~NDn~P~F~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~~~----~~F~id~~tG~i~~~~~ld~ 221 (1095)
++|+|+|||+|+|.+..|.++|+|++++|+.|++|+|+|+|.|.|+.|+|+|.... ..|.|++.||.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 47899999999999999999999999999999999999999999999999998653 57999999999999999999
Q ss_pred CCCcEEEEEEEEeecCccccCCCCcceEEEEEEEEeccCCcC
Q psy1041 222 TDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGP 263 (1095)
Q Consensus 222 e~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~dvNd~~P 263 (1095)
|....|.|+|+|+|+|.| +++++++|+|+|.|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~p----~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQP----PKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTT----BCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCC----CcEEEEEEEEEEEeccCCCC
Confidence 999999999999999965 68899999999999999998
No 35
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=1e-23 Score=198.22 Aligned_cols=108 Identities=33% Similarity=0.594 Sum_probs=101.3
Q ss_pred EEEecCCCCCCCCCCCceEEEeeCCCCCCcEEEEEEeeeCCCCCCeEEEEEEec-----CCccEEEEccccEEEEccCCC
Q psy1041 146 VNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRD-----MNEQFSIHPTSGVVTLTRPLK 220 (1095)
Q Consensus 146 I~V~D~NDn~P~F~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~-----~~~~F~id~~tG~i~~~~~ld 220 (1095)
|+|+|+|||+|+|.+..|.++|+|++++|+.|++|+|+|+|.|.|+.|+|+|.+ ....|.|++.||.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 578999999999999999999999999999999999999999999999999975 246899999999999999999
Q ss_pred cCCCcEEEEEEEEeecCccccCCCCcceEEEEEEEEecc
Q psy1041 221 YTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQIN 259 (1095)
Q Consensus 221 ~e~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~dvN 259 (1095)
||....|.|+|+|+|+|.| +++++|+|+|+|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~------~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSST------PARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSS------CEEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCC------ceEEEEEEEEEECC
Confidence 9999999999999999853 48899999999998
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=6.7e-24 Score=199.42 Aligned_cols=111 Identities=35% Similarity=0.548 Sum_probs=103.2
Q ss_pred EEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCC--CCCCCEEEeCCceEEEEcccCC
Q psy1041 951 VTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDN--EADDVFSIDRLTGTIRVAKPLD 1028 (1095)
Q Consensus 951 I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~--~~~~~F~Id~~tG~i~~~~~ld 1028 (1095)
|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.|+|+|.... +...+|.|++.||.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 57999999999999999999999999999999999999999999999999997521 2356899999999999999999
Q ss_pred CCCCCEEEEEEEEEECCCCCceeEEEEEEEEEecC
Q psy1041 1029 FEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVN 1063 (1095)
Q Consensus 1029 ~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvN 1063 (1095)
||....|.|+|+|+|+|.|+ ++++|+|+|.|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 99999999999999999875 8899999999998
No 37
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.8e-21 Score=185.16 Aligned_cols=115 Identities=26% Similarity=0.369 Sum_probs=107.0
Q ss_pred ccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeC----CCCCcEEEeCCceEEEEcccCCccCC
Q psy1041 744 ENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSG----DNDSVFRIDPDSGELKVVGYLDRERT 819 (1095)
Q Consensus 744 vNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g----~~~~~F~Id~~tG~i~~~~~LD~E~~ 819 (1095)
.+++.|.|...++.+.+.|+.+.|+.|++|. +|+|.|.|+.++|+|.++ +..++|.|++.||+|++.++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 3579999999999999999999999999999 699999999999999976 34579999999999999999999999
Q ss_pred CEEEEEEEEEECCCCCCceeEEEEEEEEecCCCCCccccc
Q psy1041 820 SEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKS 859 (1095)
Q Consensus 820 ~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~F~~~ 859 (1095)
..|.|+|+|+|.|.|++++++.|.|.|+|+|||+|+|.++
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 9999999999999999999999999999999999999763
No 38
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=3.4e-21 Score=183.32 Aligned_cols=115 Identities=22% Similarity=0.293 Sum_probs=106.9
Q ss_pred cCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCC---CCCCCEEEeCCceEEEEcccCCCCCC
Q psy1041 956 INDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDN---EADDVFSIDRLTGTIRVAKPLDFEKR 1032 (1095)
Q Consensus 956 vNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~---~~~~~F~Id~~tG~i~~~~~ld~E~~ 1032 (1095)
.+.++|.|..+.|.+.+.|++++|+.|++|. +|+|.|.|+.|+|+|.+++ +....|.||+.||.|+++++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 3678999999999999999999999999999 6999999999999999842 24578999999999999999999999
Q ss_pred CEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCeeec
Q psy1041 1033 QVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSD 1073 (1095)
Q Consensus 1033 ~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P~F~~ 1073 (1095)
..|.|+|.|+|+|.|++++++.|.|+|.|+||| +|+|.+
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn--~P~F~~ 122 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDINDN--EPVFTQ 122 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECTTCC--CCCCCC
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCC--CCEeCC
Confidence 999999999999999999999999999999998 999986
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.77 E-value=5e-19 Score=164.85 Aligned_cols=98 Identities=27% Similarity=0.387 Sum_probs=80.7
Q ss_pred EEEEEecCCCCCcE--EEEEEEEeCCCCCCcEEEEEEEeC----CCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEE
Q psy1041 756 IELQVNESVPLKST--LTKIIARDRDLGYNGKLVFGISSG----DNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVY 829 (1095)
Q Consensus 756 ~~~~v~E~~~~g~~--v~~v~A~D~D~g~n~~v~y~i~~g----~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~ 829 (1095)
|.++|+||.+.|+. |+++ |.|.|.|+.++|+|.++ +..++|.|++.||.|++.++||||....|.|+|+|+
T Consensus 7 ~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 83 (110)
T 1ncg_A 7 PPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV 83 (110)
T ss_dssp CCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred eeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEE
Confidence 46799999999995 5555 78888899999999864 456899999999999999999999999999999999
Q ss_pred ECCCCCCceeEEEEEEEEecCCCCCcc
Q psy1041 830 DLGKPQKSTSKMLPITILDVNDNPPKF 856 (1095)
Q Consensus 830 D~g~p~~s~~~~v~I~V~DvNDn~P~F 856 (1095)
|.|.|++++++.|.|.|+|+|||+|+|
T Consensus 84 D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 84 DINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CTTSCBCSCCEEEEEEEC---------
T ss_pred ECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 999999999999999999999999998
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.76 E-value=1e-18 Score=162.78 Aligned_cols=100 Identities=21% Similarity=0.325 Sum_probs=81.7
Q ss_pred ceEEEEeCCCCCCcE--EEEEEEEcCCCCCCceEEEEEEeCC---CCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEE
Q psy1041 967 NYSVKVREDIPVGTV--VAILSASDPDLGQGGVVRYTIVSDN---EADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRA 1041 (1095)
Q Consensus 967 ~y~~~v~E~~~~g~~--v~~v~A~D~D~g~n~~v~Y~i~~~~---~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A 1041 (1095)
.|.+.|+||+++|+. |+++ |.|.|.|+.|+|+|.+.+ +..+.|.||+.||.|+++++||||....|.|+|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 467899999999995 5554 788889999999998732 34679999999999999999999999999999999
Q ss_pred EECCCCCceeEEEEEEEEEecCCCCCCCee
Q psy1041 1042 KDNGSPPLYSEATLIVEVSDVNENMNAPVF 1071 (1095)
Q Consensus 1042 ~D~g~p~ls~~~~v~I~V~dvNdn~~~P~F 1071 (1095)
+|+|.|++++++.|.|+|.|+||| +|+|
T Consensus 83 ~D~g~p~~~~~~~v~I~V~DvNDn--~P~F 110 (110)
T 1ncg_A 83 VDINGNQVENPIDIVINVIDMNDN--RPEF 110 (110)
T ss_dssp ECTTSCBCSCCEEEEEEEC-----------
T ss_pred EECCCCceeeEEEEEEEEEECCCC--CCCC
Confidence 999999999999999999999998 9988
No 41
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.68 E-value=1.2e-16 Score=145.06 Aligned_cols=91 Identities=32% Similarity=0.442 Sum_probs=83.4
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEcCCCCCCceEEEEEEeCCCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEECC
Q psy1041 968 YSVKVREDIP--VGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNG 1045 (1095)
Q Consensus 968 y~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D~g 1045 (1095)
+.+.|+||.+ .|+.|++|. +|+|.| |+.|+|+|.++ ...+.|.||+.+|.|++.++||||.+..|.|+|.|+|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~-~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G 82 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGE-GAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRR 82 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEET-TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCC-CCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECC
Confidence 4678999976 689999999 999999 99999999873 334789999999999999999999999999999999999
Q ss_pred -CCCceeEEEEEEEEEe
Q psy1041 1046 -SPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1046 -~p~ls~~~~v~I~V~d 1061 (1095)
+|++++.++|.|+|.|
T Consensus 83 ~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 83 TGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TCCBSSCCEEEEEEEEC
T ss_pred CCCCcceeEEEEEEEeC
Confidence 5999999999999986
No 42
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.68 E-value=1.4e-16 Score=144.43 Aligned_cols=91 Identities=27% Similarity=0.359 Sum_probs=84.3
Q ss_pred EEEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECC-
Q psy1041 756 IELQVNESVP--LKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLG- 832 (1095)
Q Consensus 756 ~~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g- 832 (1095)
+.+.|+||.+ .|+.|++|. +|+|.| |++++|+|.+++..+.|.|++.+|.|++.++||||+...|.|+|+|+|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~ 83 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRT 83 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCC
Confidence 3578999976 689999999 999999 99999999887666799999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEEe
Q psy1041 833 KPQKSTSKMLPITILD 848 (1095)
Q Consensus 833 ~p~~s~~~~v~I~V~D 848 (1095)
.|++++++.|.|.|.|
T Consensus 84 ~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 84 GRPMEPESEFIIKIQD 99 (99)
T ss_dssp CCBSSCCEEEEEEEEC
T ss_pred CCCcceeEEEEEEEeC
Confidence 5999999999999987
No 43
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.67 E-value=1.4e-16 Score=144.33 Aligned_cols=91 Identities=30% Similarity=0.448 Sum_probs=81.2
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEcCCCCCCceEEEEEEeCCCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEECC
Q psy1041 968 YSVKVREDIP--VGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNG 1045 (1095)
Q Consensus 968 y~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D~g 1045 (1095)
+.+.|+||.+ .|+.|+++. +|+|.| |+.|+|+|.+. ...+.|.||+.||.|++.++||||.+..|.|+|.|+|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~-~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g 81 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGD-GAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFE 81 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEET-TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCC-CCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECC
Confidence 5678999985 899999997 999999 99999999873 235689999999999999999999999999999999999
Q ss_pred C-CCceeEEEEEEEEEe
Q psy1041 1046 S-PPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1046 ~-p~ls~~~~v~I~V~d 1061 (1095)
. |++++++.|.|+|.|
T Consensus 82 ~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 82 TNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TCCBSSCCEEEEEEECC
T ss_pred CCCCcceeEEEEEEEEC
Confidence 7 789999999999976
No 44
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=6.3e-18 Score=160.67 Aligned_cols=106 Identities=26% Similarity=0.291 Sum_probs=92.4
Q ss_pred CcEEEEEecCCCCCcEEEEEEEEeCCCCCCcEE---EEEEEeCCCCCcEEEeCCceEEEEcccCCccCC----CEEEEEE
Q psy1041 754 FPIELQVNESVPLKSTLTKIIARDRDLGYNGKL---VFGISSGDNDSVFRIDPDSGELKVVGYLDRERT----SEYTLNI 826 (1095)
Q Consensus 754 ~~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v---~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V 826 (1095)
..+.++|+|+.+.|+.|++| |+|.|.+. +.+ +|+|.+++...+|.||+.||.|++.++||||.. ..|.|.|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 34567899999999999999 99998764 345 899998877889999999999999999999999 9999999
Q ss_pred EEEECCCCCCceeEEEEEEEEecCCCCCcccccceEEE
Q psy1041 827 TVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFR 864 (1095)
Q Consensus 827 ~a~D~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~ 864 (1095)
+|.+. .| + ..+.|.|.|+|+|||+|+|.++.|.++
T Consensus 89 ~a~~~-~p-~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLK-SP-V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEET-TT-T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEC-CC-C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99984 33 3 477899999999999999999988754
No 45
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.67 E-value=1.7e-16 Score=143.77 Aligned_cols=91 Identities=23% Similarity=0.363 Sum_probs=82.0
Q ss_pred EEEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECCC
Q psy1041 756 IELQVNESVP--LKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGK 833 (1095)
Q Consensus 756 ~~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~ 833 (1095)
+.++|+||.+ .|+.|+++. +|+|.| |++++|+|.+++..+.|.||+.||.|++.++||||+...|.|+|+|+|+|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 4578999995 899999997 999999 999999998766667899999999999999999999999999999999997
Q ss_pred -CCCceeEEEEEEEEe
Q psy1041 834 -PQKSTSKMLPITILD 848 (1095)
Q Consensus 834 -p~~s~~~~v~I~V~D 848 (1095)
|++++++.|.|.|+|
T Consensus 83 ~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 83 NKPLEPPSEFIIKVQD 98 (98)
T ss_dssp CCBSSCCEEEEEEECC
T ss_pred CCCcceeEEEEEEEEC
Confidence 789999999999976
No 46
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=1e-17 Score=159.27 Aligned_cols=106 Identities=18% Similarity=0.169 Sum_probs=92.8
Q ss_pred CcEEEEEeCCCCCCceEEEEEEeeCCCCCCceE---EEEEEeCCCCCcEEEECCccEEEEceecCcccc----cEEEEEE
Q psy1041 382 EIYEVDVPETTPVNTPIIRLKVSDADDGKNAQV---FLEIVGGNEGGEFNINPETGMLYTAVTLDAEDK----AFYTLTV 454 (1095)
Q Consensus 382 ~~~~~~v~E~~~~g~~v~~v~a~D~D~g~n~~i---~ysi~~~~~~~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V 454 (1095)
..|..+|+|+.++|+.|++| |+|.|.+. +.+ +|+|.+++..+.|.||+.||.|++.++||||.. ..|.|+|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 45667899999999999999 99998764 344 899988777889999999999999999999999 9999999
Q ss_pred EEEeCCCCCCceeeeEEEEEEEeecCCCCCcccCCccEEE
Q psy1041 455 SAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVS 494 (1095)
Q Consensus 455 ~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~ 494 (1095)
+|.+.. | ...+.|.|+|+|+|||+|+|.++.|.++
T Consensus 89 ~a~~~~-p----~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKS-P----VQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETT-T----TEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECC-C----CeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 999853 2 2478999999999999999999988765
No 47
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.63 E-value=7.9e-16 Score=140.00 Aligned_cols=90 Identities=22% Similarity=0.284 Sum_probs=82.4
Q ss_pred eEEEEeCCCCC--CcEEEEEEEEcCCCCCCceEEEEEEeC---CCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEE
Q psy1041 968 YSVKVREDIPV--GTVVAILSASDPDLGQGGVVRYTIVSD---NEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAK 1042 (1095)
Q Consensus 968 y~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~v~Y~i~~~---~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~ 1042 (1095)
+.+.|+||.++ |+.|++|+|+|+|. .|+|+|.+. ++..+.|.||+.||.|++.++||||.+..|.|+|.|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 35789999999 99999999999996 699999862 2346799999999999999999999999999999999
Q ss_pred ECCCCCceeEEEEEEEEEe
Q psy1041 1043 DNGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1043 D~g~p~ls~~~~v~I~V~d 1061 (1095)
|+|+|++++.++|.|+|.|
T Consensus 81 D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 81 DENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCceeeEEEEEEEEEC
Confidence 9999999999999999986
No 48
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.61 E-value=9.6e-16 Score=140.97 Aligned_cols=91 Identities=22% Similarity=0.346 Sum_probs=80.6
Q ss_pred EEEEeCCCC--CCcEEEEEEEEcCCCCCCceEEEEEEeCCCC---CCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEE
Q psy1041 969 SVKVREDIP--VGTVVAILSASDPDLGQGGVVRYTIVSDNEA---DDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKD 1043 (1095)
Q Consensus 969 ~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~---~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D 1043 (1095)
.+.|+||.+ .|+.|++|.| | .|.|+.|+|+|.+++.. .+.|.||+.||.|++.++||||.+..|.|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 468999998 5889999999 3 36799999999884321 46899999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEEEec
Q psy1041 1044 NGSPPLYSEATLIVEVSDV 1062 (1095)
Q Consensus 1044 ~g~p~ls~~~~v~I~V~dv 1062 (1095)
+|.|++++++.|.|+|.|+
T Consensus 87 ~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBSSCCEEEEEEEEC-
T ss_pred CCCCceeeEEEEEEEEEeC
Confidence 9999999999999999985
No 49
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.61 E-value=2.1e-15 Score=137.46 Aligned_cols=89 Identities=22% Similarity=0.277 Sum_probs=81.4
Q ss_pred EEEEeCCCCC--CcEEEEEEEEcCCCCCCceEEEEEEeC---CCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEE
Q psy1041 969 SVKVREDIPV--GTVVAILSASDPDLGQGGVVRYTIVSD---NEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKD 1043 (1095)
Q Consensus 969 ~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~v~Y~i~~~---~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D 1043 (1095)
.+.|.||.+. |+.|++|.|+|+|. .|+|+|.+. .+..+.|.||+.||.|++.++||||....|.|+|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 5789999998 89999999999997 589999863 12357899999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEEEe
Q psy1041 1044 NGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1044 ~g~p~ls~~~~v~I~V~d 1061 (1095)
+|.|++++.++|.|+|.|
T Consensus 83 ~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCcccceEEEEEEEEC
Confidence 999999999999999987
No 50
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.61 E-value=2.9e-15 Score=136.40 Aligned_cols=89 Identities=19% Similarity=0.288 Sum_probs=81.2
Q ss_pred EEEEeCCCCCC--cEEEEEEEEcCCCCCCceEEEEEEeC---CCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEE
Q psy1041 969 SVKVREDIPVG--TVVAILSASDPDLGQGGVVRYTIVSD---NEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKD 1043 (1095)
Q Consensus 969 ~~~v~E~~~~g--~~v~~v~A~D~D~g~n~~v~Y~i~~~---~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D 1043 (1095)
.+.|.||.+.| +.|++|.|+|+|. .|+|+|.+. .+..+.|.||+.||.|++.++||||....|.|+|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 46899999986 8999999999997 799999863 22357899999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEEEe
Q psy1041 1044 NGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 1044 ~g~p~ls~~~~v~I~V~d 1061 (1095)
+|+|++++.++|.|+|.|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTSCEEEEEEEEEEEEEC
T ss_pred CCCCceeeeEEEEEEEEC
Confidence 999999999999999987
No 51
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.59 E-value=1.9e-15 Score=137.54 Aligned_cols=88 Identities=22% Similarity=0.362 Sum_probs=81.7
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCcEEEEEEEe----CCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEE
Q psy1041 757 ELQVNESVPL--KSTLTKIIARDRDLGYNGKLVFGISS----GDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYD 830 (1095)
Q Consensus 757 ~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~v~y~i~~----g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 830 (1095)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+ ++..+.|.|++.||.|++.++||||....|.|+|+|+|
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 81 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTD 81 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEE
Confidence 4689999999 99999999999997 78999975 44568999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEEEe
Q psy1041 831 LGKPQKSTSKMLPITILD 848 (1095)
Q Consensus 831 ~g~p~~s~~~~v~I~V~D 848 (1095)
+|.|++++.+.|.|+|+|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 82 ENGKTIEGPVDLEILVID 99 (99)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCceeeEEEEEEEEEC
Confidence 999999999999999987
No 52
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.58 E-value=3.5e-15 Score=137.25 Aligned_cols=89 Identities=27% Similarity=0.355 Sum_probs=80.2
Q ss_pred EEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEEeCCC----CCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEEC
Q psy1041 758 LQVNESVP--LKSTLTKIIARDRDLGYNGKLVFGISSGDN----DSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDL 831 (1095)
Q Consensus 758 ~~v~E~~~--~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 831 (1095)
+.|+||.+ .+..|+++.| | .|.|++++|+|.+++. .+.|.||+.||+|++.++||||+...|.|+|+|+|+
T Consensus 11 ~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~ 87 (105)
T 2omz_B 11 ISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSS 87 (105)
T ss_dssp CCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECT
T ss_pred EEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEEC
Confidence 57999999 5889999999 3 3569999999998653 368999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEEec
Q psy1041 832 GKPQKSTSKMLPITILDV 849 (1095)
Q Consensus 832 g~p~~s~~~~v~I~V~Dv 849 (1095)
|.|++++++.|.|.|+|+
T Consensus 88 g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 88 NGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TSCBSSCCEEEEEEEEC-
T ss_pred CCCceeeEEEEEEEEEeC
Confidence 999999999999999986
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.57 E-value=8e-15 Score=133.45 Aligned_cols=87 Identities=28% Similarity=0.413 Sum_probs=80.5
Q ss_pred EEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEEeC----CCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEEC
Q psy1041 758 LQVNESVPLK--STLTKIIARDRDLGYNGKLVFGISSG----DNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDL 831 (1095)
Q Consensus 758 ~~v~E~~~~g--~~v~~v~A~D~D~g~n~~v~y~i~~g----~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 831 (1095)
+.|+||.+.| +.|++|.|+|+|. .++|+|.+. +..+.|.||+.||+|++.++||||+...|.|+|+|+|.
T Consensus 7 ~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~ 82 (99)
T 3k6i_A 7 ILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDL 82 (99)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEET
T ss_pred EEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEEC
Confidence 6899999997 8899999999997 799999863 34579999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEEe
Q psy1041 832 GKPQKSTSKMLPITILD 848 (1095)
Q Consensus 832 g~p~~s~~~~v~I~V~D 848 (1095)
|.|++++.+.|.|.|+|
T Consensus 83 g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 83 SGKIIDGPVRLDISVID 99 (99)
T ss_dssp TSCEEEEEEEEEEEEEC
T ss_pred CCCceeeeEEEEEEEEC
Confidence 99999999999999987
No 54
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.57 E-value=5.9e-15 Score=134.49 Aligned_cols=88 Identities=23% Similarity=0.375 Sum_probs=80.9
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCcEEEEEEEeC----CCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEE
Q psy1041 757 ELQVNESVPL--KSTLTKIIARDRDLGYNGKLVFGISSG----DNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYD 830 (1095)
Q Consensus 757 ~~~v~E~~~~--g~~v~~v~A~D~D~g~n~~v~y~i~~g----~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 830 (1095)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+. +..+.|.||+.||+|++.++||||+...|.|+|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 3689999998 89999999999997 589999863 3457999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEEEe
Q psy1041 831 LGKPQKSTSKMLPITILD 848 (1095)
Q Consensus 831 ~g~p~~s~~~~v~I~V~D 848 (1095)
.|.|++++.+.|.|.|+|
T Consensus 83 ~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCcccceEEEEEEEEC
Confidence 999999999999999987
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.29 E-value=4.5e-13 Score=122.64 Aligned_cols=94 Identities=23% Similarity=0.371 Sum_probs=75.4
Q ss_pred cEEEEEecCCCCCcEEEEEEEEeCCCCCC--cEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCC----EEEEEEEE
Q psy1041 755 PIELQVNESVPLKSTLTKIIARDRDLGYN--GKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTS----EYTLNITV 828 (1095)
Q Consensus 755 ~~~~~v~E~~~~g~~v~~v~A~D~D~g~n--~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~----~y~l~V~a 828 (1095)
.+.++|+|+.+.|+.|++| |.|.|.+.+ +.+.|+|.+++...+|.|++.||.|++.++||||+.. .|.+.+++
T Consensus 4 ~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v 82 (103)
T 1wuz_A 4 QIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEV 82 (103)
T ss_dssp EEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEE
T ss_pred eEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEE
Confidence 4567999999999999999 999886432 3678999988788999999999999999999999863 33444444
Q ss_pred EECCCCCCceeEEEEEEEEecCCC
Q psy1041 829 YDLGKPQKSTSKMLPITILDVNDN 852 (1095)
Q Consensus 829 ~D~g~p~~s~~~~v~I~V~DvNDn 852 (1095)
.. +.|. ....|.|.|+|+|||
T Consensus 83 ~~-~~p~--~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 83 IV-DRPL--QVFHVEVEVRDINDN 103 (103)
T ss_dssp EE-TTTT--EEEEEEEEEECCSCC
T ss_pred EE-CCCC--EEEEEEEEEEEcCCC
Confidence 43 3343 377899999999997
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.26 E-value=9.5e-13 Score=120.48 Aligned_cols=93 Identities=20% Similarity=0.316 Sum_probs=75.7
Q ss_pred CcEEEEEeCCCCCCceEEEEEEeeCCCCCC--ceEEEEEEeCCCCCcEEEECCccEEEEceecCccccc------EEEEE
Q psy1041 382 EIYEVDVPETTPVNTPIIRLKVSDADDGKN--AQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKA------FYTLT 453 (1095)
Q Consensus 382 ~~~~~~v~E~~~~g~~v~~v~a~D~D~g~n--~~i~ysi~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~------~y~l~ 453 (1095)
..|..+|+|+.++|+.|++| |.|.|.+.+ +.+.|+|.+++..++|.|++.||.|++.++||||+.. .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 35678999999999999999 999876422 3588999887778899999999999999999999863 45555
Q ss_pred EEEEeCCCCCCceeeeEEEEEEEeecCCC
Q psy1041 454 VSAIDQGNAGTRKQSAAKVKVNIVDTNDN 482 (1095)
Q Consensus 454 V~a~D~g~~~~~~~~~~~v~I~V~DvNDn 482 (1095)
|.+ . .| . ..+.|.|.|+|+|||
T Consensus 82 v~~--~-~p---~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 82 VIV--D-RP---L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEE--T-TT---T-EEEEEEEEEECCSCC
T ss_pred EEE--C-CC---C-EEEEEEEEEEEcCCC
Confidence 554 3 22 2 378999999999997
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=95.09 E-value=2.5 Score=42.37 Aligned_cols=117 Identities=20% Similarity=0.184 Sum_probs=64.7
Q ss_pred ccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCC-CC--CC-cEEEEEEEEcCCCCCCc
Q psy1041 921 RQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVRED-IP--VG-TVVAILSASDPDLGQGG 996 (1095)
Q Consensus 921 ~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~-~~--~g-~~v~~v~A~D~D~g~n~ 996 (1095)
....|.|+++|+|..|. .+....+.|+|.+ ..+|... ..-+.+ .. .| .+-.+..|+|.|. +
T Consensus 59 ~~G~htlta~A~D~aGn-----~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g---~ 123 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGR-----RIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDG---K 123 (190)
T ss_dssp CSEEEEEEEEEEETTSC-----EEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSS---C
T ss_pred CCccEEEEEEEEECCCC-----EeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCC---c
Confidence 45789999999999872 2333457777776 3477543 222333 22 23 3456677887662 2
Q ss_pred eEEEEEEeCCCCCCCEEEeCC-ceEEEEcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEe
Q psy1041 997 VVRYTIVSDNEADDVFSIDRL-TGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 997 ~v~Y~i~~~~~~~~~F~Id~~-tG~i~~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~d 1061 (1095)
.-+|.+--++ ....-+.. ........ ..+.|.|+++|+|..+. .+....|.|.|.+
T Consensus 124 V~~Ve~~~dg---~~v~t~t~~~y~~~~~~-----~~G~~tl~a~A~D~aGn-~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 124 ISRVDFLVDG---EVIGSDREAPYEYEWKA-----VEGNHEISVIAYDDDDA-ASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEEEEEETT---EEEEEECSSSEEEEEEC-----CSEEEEEEEEEEETTCC-BCCCEEEEEEEBC
T ss_pred EEEEEEEECC---EEEecccCCCEEEEEec-----CCeeEEEEEEEEECCCC-EEecceEEEEECC
Confidence 2233333311 11111111 11122211 46799999999998765 3455667777653
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=94.19 E-value=1.1 Score=45.11 Aligned_cols=116 Identities=17% Similarity=0.177 Sum_probs=63.4
Q ss_pred cceEEEEEEEEEeccCCCCCCceeEEEEEEEEEecCCCCCCCCCCCceEEEeeCCCC---CCc-EEEEEEeeeCCCCCCe
Q psy1041 116 KDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLP---LHT-SILRVSAEDADLGRNG 191 (1095)
Q Consensus 116 ~~~y~l~V~A~d~~~~~~~~~~~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~---~g~-~v~~v~A~D~D~g~n~ 191 (1095)
.-.|.|+++|+|. .+..+....+.|.|.+ ..+|.- ...-+.+.. .|. .-++..|.|.| |.=.
T Consensus 60 ~G~htlta~A~D~------aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~-g~V~ 125 (190)
T 3pdd_A 60 VGAYNLKAVAVLS------DGRRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSD-GKIS 125 (190)
T ss_dssp SEEEEEEEEEEET------TSCEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSS-SCEE
T ss_pred CccEEEEEEEEEC------CCCEeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCC-CcEE
Confidence 4589999999993 2223333457777766 445543 233344322 243 44677788765 3223
Q ss_pred EEEEEEecCCccEEEEcccc-EEEEccCCCcCCCcEEEEEEEEeecCccccCCCCcceEEEEEEEEe
Q psy1041 192 EIYYSFRDMNEQFSIHPTSG-VVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQ 257 (1095)
Q Consensus 192 ~v~Y~l~~~~~~F~id~~tG-~i~~~~~ld~e~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~d 257 (1095)
++.|.+.+ ....-+.... ...+.. ..+.|.|+++|+|..- ..+....|.|+|.+
T Consensus 126 ~Ve~~~dg--~~v~t~t~~~y~~~~~~-----~~G~~tl~a~A~D~aG-----n~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 126 RVDFLVDG--EVIGSDREAPYEYEWKA-----VEGNHEISVIAYDDDD-----AASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEEEETT--EEEEEECSSSEEEEEEC-----CSEEEEEEEEEEETTC-----CBCCCEEEEEEEBC
T ss_pred EEEEEECC--EEEecccCCCEEEEEec-----CCeeEEEEEEEEECCC-----CEEecceEEEEECC
Confidence 45454432 1111111111 111111 4689999999999872 33456777777753
No 59
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=93.59 E-value=2.3 Score=45.83 Aligned_cols=188 Identities=16% Similarity=0.231 Sum_probs=88.8
Q ss_pred CCCCCcccCCccEEEEeecCCCCcEEEEEEEeeCCCCCCceEEEEEecCCC---CCcEEecccceEEEce----------
Q psy1041 480 NDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKP---VPFEIDHFSGVIKTTQ---------- 546 (1095)
Q Consensus 480 NDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~ysi~~~~~---~~F~Id~~tG~i~~~~---------- 546 (1095)
+|+++.|.-..-..+|.|+. |+.-.+|.-+- +......+.|...++.. .-|. +.+|.|....
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 45566655544467899986 55555555544 44455678888776532 1232 2234443321
Q ss_pred ecc---ccccccEEEEEEEEEECCcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCCC
Q psy1041 547 VLD---YESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGN 623 (1095)
Q Consensus 547 ~lD---~E~~~~~~~l~V~a~D~g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~~ 623 (1095)
.+| +|. ...|. |..+..............+|+|.| ||++|.|.-..-...|.|+. |...++|.-+-.-.+.
T Consensus 81 I~dD~~~E~-dEtF~--v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g~ 154 (298)
T 3rb5_A 81 VIDDDVFEE-DECFY--IRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARGT 154 (298)
T ss_dssp BCCCSSCCC-CEEEE--EEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCSC
T ss_pred EeCCCCccC-cEEEE--EEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCCC
Confidence 122 232 23444 444442111112222345677776 67789876655567888985 6666676655544444
Q ss_pred -eEEEEEEeCCCCCcEEEeCCCcEEEEeeccCcccccEEEEEEEEecCCCccceEEEEEEE
Q psy1041 624 -IISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINL 683 (1095)
Q Consensus 624 -~i~y~i~~~~~~~~F~Id~~tG~i~~~~~ld~~~~~~~~l~V~atD~~~~s~~~~v~I~v 683 (1095)
.+.|+...|.....-...+.+|.|..... ...-.+.|...|.......-.+.|.+
T Consensus 155 vtV~~~T~dGTA~~g~Dy~~~~gtltF~~G-----et~kti~V~IidD~~~E~dEtF~v~L 210 (298)
T 3rb5_A 155 VIVPYWTENDTATESKDYEGARGELVFENN-----ESEKFIDLFILEESSYEKDVSFKVHI 210 (298)
T ss_dssp EEEEEEEEEC-----CCSCCCEEEEEECTT-----CCEEEEEEC---------CEEEEEEE
T ss_pred EEEEEEecCCccCCCccceecccEEEECCC-----CEEEEEEEEEeCCCcccCceEEEEEE
Confidence 78888776644211111224565554321 22334455555544333334455544
No 60
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=91.87 E-value=1.1 Score=50.62 Aligned_cols=95 Identities=28% Similarity=0.437 Sum_probs=63.2
Q ss_pred ccCCCCCeeecCce------EEEEeCCCCCCcEEEEEEE---EcCCCCCCceEEEEEEeCCCC---CCCEEEe-CCceEE
Q psy1041 955 DINDNAPNFALPNY------SVKVREDIPVGTVVAILSA---SDPDLGQGGVVRYTIVSDNEA---DDVFSID-RLTGTI 1021 (1095)
Q Consensus 955 DvNDn~P~f~~~~y------~~~v~E~~~~g~~v~~v~A---~D~D~g~n~~v~Y~i~~~~~~---~~~F~Id-~~tG~i 1021 (1095)
..| ++|+.....- ...+.+ |..| ++.| +|+| +..++|+....... .....|. ..+..+
T Consensus 329 ~aN-haPVa~iag~~g~~p~~~~v~a----G~tV-tLdAs~SsDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~ 399 (437)
T 2yhg_A 329 AAN-HHPVPVVNNDANEAVMYLNASA----GSTV-SLDASGSSDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASA 399 (437)
T ss_dssp GSC-CCCBCCBTTBCCSSCEEEEECT----TCEE-EEECTTCBCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEE
T ss_pred cCC-CCCEEEecCCCcccccceEecC----CCEE-EEEeeeeeCCC---CCeEEEEEEEeCCCCccccceEeecCCCceE
Confidence 355 4887763221 334433 3333 5655 4777 56799999864332 1245664 445567
Q ss_pred EEcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEE
Q psy1041 1022 RVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEV 1059 (1095)
Q Consensus 1022 ~~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V 1059 (1095)
++..+-+ +....|.|.++++|++.|.+++...|+|+|
T Consensus 400 sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 400 NVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp EEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred EEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 7766654 456789999999999999999999999987
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=85.21 E-value=27 Score=37.45 Aligned_cols=188 Identities=18% Similarity=0.254 Sum_probs=87.7
Q ss_pred CCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC----cceEEeCCcceEEEcc----------
Q psy1041 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDT----QDFAVDSATGSLYVSA---------- 915 (1095)
Q Consensus 850 NDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~----~~F~Id~~tG~i~~~~---------- 915 (1095)
+|+++.|.-..-...|.|+. |+...+|.-.- +......+.|...++. ..|. +.+|.|....
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 45666665555567799986 55555554432 3333456888876653 2332 2234443321
Q ss_pred ccc---ccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCC
Q psy1041 916 SLD---RERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDL 992 (1095)
Q Consensus 916 ~LD---~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~ 992 (1095)
.+| +|....|.|.+ +...+ ...+......+|+|.| ||++|.|....-...|.|+. |.....|.-+-.-.
T Consensus 81 I~dD~~~E~dEtF~v~L--s~p~~---~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~ 152 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRL--FNPSE---GVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGAR 152 (298)
T ss_dssp BCCCSSCCCCEEEEEEE--ECCCT---TCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCC
T ss_pred EeCCCCccCcEEEEEEE--eCCCC---CcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCC
Confidence 121 34344444444 44321 1112223345666666 67789887665567888984 66766776654322
Q ss_pred CCCceEEEEEEeCCCCC-CCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEE
Q psy1041 993 GQGGVVRYTIVSDNEAD-DVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVS 1060 (1095)
Q Consensus 993 g~n~~v~Y~i~~~~~~~-~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~ 1060 (1095)
..-.+.|+...+.... .-| .+.+|.|....- ...-.++|...|...+ ...-++.|.+.
T Consensus 153 -g~vtV~~~T~dGTA~~g~Dy--~~~~gtltF~~G-----et~kti~V~IidD~~~--E~dEtF~v~Ls 211 (298)
T 3rb5_A 153 -GTVIVPYWTENDTATESKDY--EGARGELVFENN-----ESEKFIDLFILEESSY--EKDVSFKVHIG 211 (298)
T ss_dssp -SCEEEEEEEEEC-----CCS--CCCEEEEEECTT-----CCEEEEEEC-----------CEEEEEEEC
T ss_pred -CCEEEEEEecCCccCCCccc--eecccEEEECCC-----CEEEEEEEEEeCCCcc--cCceEEEEEEc
Confidence 2335778766632111 122 234666665431 2233455555555443 23344555443
No 62
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=84.37 E-value=4.6 Score=38.78 Aligned_cols=80 Identities=19% Similarity=0.346 Sum_probs=61.8
Q ss_pred CCCCCCCCCceEEEeeCCCCCCcEEEEEEeeeCCCCCCeEEEEEEecCCccEEEEccccEEEEccCCCcCCCcEEEEEEE
Q psy1041 153 DLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVL 232 (1095)
Q Consensus 153 Dn~P~F~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~l~V~ 232 (1095)
-+-|-|.+..|...++-....|..+++|.-.|.. .+..+.|...+ +..|.|+ ..|.|.+++++-.-.. .-.|.|.
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~ssD-p~dFkV~-~DGtVya~r~v~L~~~-~~~F~V~ 105 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYESSE-PADFKVD-EDGTVYAVRSFPLTAE-QAKFLIY 105 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEECCC-SSEEEEE-TTTEEEEESCCSCSSS-CEEEEEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEcCC-CCCeEEe-CCCcEEEecceeecCC-CcEEEEE
Confidence 4789999999988888999999999999999986 34556665542 3389999 5699999988754332 2478899
Q ss_pred EeecC
Q psy1041 233 GQDRG 237 (1095)
Q Consensus 233 A~D~g 237 (1095)
|.|..
T Consensus 106 a~D~~ 110 (159)
T 1op4_A 106 AQDKE 110 (159)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99943
No 63
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=83.32 E-value=3 Score=37.04 Aligned_cols=85 Identities=22% Similarity=0.260 Sum_probs=54.0
Q ss_pred CCCCCcccccceEEEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCcceEEeCCcceEEEcccccccccCeeEEEE
Q psy1041 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKI 929 (1095)
Q Consensus 850 NDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V 929 (1095)
.|.+|+|.-.. ...|..+..... ..-++|+|...|. | +..|.+....|....+.|.++.
T Consensus 7 ~~~~P~It~~~-d~tI~~Gd~fd~-~~gvtA~D~~DGD-------l------------T~~I~V~g~Vdt~k~G~Y~VtY 65 (103)
T 2kpn_A 7 SDLEPKLTVPV-GATIHVGDSFVP-MAEVLAIDKEDGD-------L------------TSKIKVDGEVDTTKAGTYVLTY 65 (103)
T ss_dssp CCCCCEEECCS-EEEEETTCCCCH-HHHCEEECSSSCB-------C------------GGGCEEESCCCSSSCEEEEEEE
T ss_pred CCCCCEEEeCC-CEEEECCCCccc-ccCcEEEcCCCCC-------c------------ceeEEEeCcccCCCceEEEEEE
Confidence 35678876432 345554433211 1125777765443 1 2334455677888889999999
Q ss_pred EEEeCCCCCCCcceeEEEEEEEEEeccCCCCC
Q psy1041 930 RASDCDGRNDMYTLHADALVRVTIDDINDNAP 961 (1095)
Q Consensus 930 ~A~D~~g~~~~~~~~~~~~v~I~V~DvNDn~P 961 (1095)
.++|..| ..++++.+|+|.+..+..|
T Consensus 66 ~VtDs~G------n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 66 TVTDSKG------HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEECTTS------CEEEEEEEEEEECSSCCCC
T ss_pred EEEcCCC------CEEEEEEEEEEeCCCcccC
Confidence 9999986 5677888899988665443
No 64
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=80.42 E-value=7 Score=37.49 Aligned_cols=80 Identities=13% Similarity=0.193 Sum_probs=62.9
Q ss_pred CCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCcEEEeCCCcEEEEeeccCcccccEEEEEEE
Q psy1041 587 DNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVT 666 (1095)
Q Consensus 587 Dn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~~~i~y~i~~~~~~~~F~Id~~tG~i~~~~~ld~~~~~~~~l~V~ 666 (1095)
.+-|-|.+..|...++-+...|..+++|.-.|......+.|.-. +...|.|+. .|.|+.++++..... ...+.|.
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~~~~~~~ss---Dp~dFkV~~-DGtVya~r~v~L~~~-~~~F~V~ 105 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESS---EPADFKVDE-DGTVYAVRSFPLTAE-QAKFLIY 105 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSSCCCEEEECC---CSSEEEEET-TTEEEEESCCSCSSS-CEEEEEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCCCCceeEEcC---CCCCeEEeC-CCcEEEecceeecCC-CcEEEEE
Confidence 35799999999888889999999999999999986667888632 223899996 699999998754322 3378899
Q ss_pred EecCC
Q psy1041 667 ATDSA 671 (1095)
Q Consensus 667 atD~~ 671 (1095)
|.|..
T Consensus 106 a~D~~ 110 (159)
T 1op4_A 106 AQDKE 110 (159)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99954
No 65
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=79.54 E-value=3.6 Score=36.53 Aligned_cols=84 Identities=18% Similarity=0.147 Sum_probs=52.3
Q ss_pred CCCCCCCCCCceEEEeeCCCCCCcEEEEEEeeeCCCCCCeEEEEEEecCCccEEEEccccEEEEccCCCcCCCcEEEEEE
Q psy1041 152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVV 231 (1095)
Q Consensus 152 NDn~P~F~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~l~V 231 (1095)
.|.+|+|.-.. ..+|.......-. .-|+|+|...|. | +..|.+.+..|....+.|.++.
T Consensus 7 ~~~~P~It~~~-d~tI~~Gd~fd~~-~gvtA~D~~DGD---l----------------T~~I~V~g~Vdt~k~G~Y~VtY 65 (103)
T 2kpn_A 7 SDLEPKLTVPV-GATIHVGDSFVPM-AEVLAIDKEDGD---L----------------TSKIKVDGEVDTTKAGTYVLTY 65 (103)
T ss_dssp CCCCCEEECCS-EEEEETTCCCCHH-HHCEEECSSSCB---C----------------GGGCEEESCCCSSSCEEEEEEE
T ss_pred CCCCCEEEeCC-CEEEECCCCcccc-cCcEEEcCCCCC---c----------------ceeEEEeCcccCCCceEEEEEE
Confidence 45677776432 2344333222111 126788876553 1 2233444567878889999999
Q ss_pred EEeecCccccCCCCcceEEEEEEEEeccCCc
Q psy1041 232 LGQDRGSVFKGGGKPSSAKLKIKVEQINLYG 262 (1095)
Q Consensus 232 ~A~D~g~~~~~~~~s~~~~v~I~V~dvNd~~ 262 (1095)
.++|.. |..++++.+|.|.+..+..
T Consensus 66 ~VtDs~------Gn~~t~trtVtV~~~~e~~ 90 (103)
T 2kpn_A 66 TVTDSK------GHEVTAKQTVTVKVREEVK 90 (103)
T ss_dssp EEECTT------SCEEEEEEEEEEECSSCCC
T ss_pred EEEcCC------CCEEEEEEEEEEeCCCccc
Confidence 999977 6678888889988755543
No 66
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=77.97 E-value=11 Score=42.38 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=45.1
Q ss_pred eCCCCCCceEEEEEEeCCCC----CcEEEE-CCccEEEEceecCcccccEEEEEEEEEeCCCCCCceeeeEEEEEEE
Q psy1041 405 DADDGKNAQVFLEIVGGNEG----GEFNIN-PETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNI 476 (1095)
Q Consensus 405 D~D~g~n~~i~ysi~~~~~~----~~F~Id-~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~~~~~~~v~I~V 476 (1095)
|+| +..++|+-..-... +...|. +.+..++...+-+ +....|.|.++++|.+.| ++++...|.|+|
T Consensus 366 DPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p--~lTs~~rViVtV 436 (437)
T 2yhg_A 366 DPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSP--NLYAYRRVVINV 436 (437)
T ss_dssp CTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSS--CCEEEEEEEEEE
T ss_pred CCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCC--CccEEeEEEEEe
Confidence 777 44688887643322 245664 4445666665544 456789999999999865 368888888887
No 67
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=72.38 E-value=31 Score=30.15 Aligned_cols=71 Identities=18% Similarity=0.255 Sum_probs=40.8
Q ss_pred CcEEEEEEeeeCCCCCCeEEEEEEecCCccEEEEcccc-EEEEccCCCcCCCcEEEEEEEEeecCccccCCCCcceEEEE
Q psy1041 174 HTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSG-VVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLK 252 (1095)
Q Consensus 174 g~~v~~v~A~D~D~g~n~~v~Y~l~~~~~~F~id~~tG-~i~~~~~ld~e~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~ 252 (1095)
+...+...|.|.| |.=.+|.|.+.+ ....-+...- ...+ +.. .+.|+|+++|+|... ....++.|.
T Consensus 17 ~~v~i~a~A~D~d-g~V~kVef~vdg--~~vg~dt~apy~~~w----~~~-~G~htl~a~AtD~~G-----~~~tS~~v~ 83 (98)
T 3pe9_A 17 EFLKITATASDSD-GKISRVDFLVDG--EVIGSDREAPYEYEW----KAV-EGNHEISVIAYDDDD-----AASTPDSVK 83 (98)
T ss_dssp SEEEEEEEECCSS-SCEEEEEEEETT--EEEEEECSSSEEEEE----ECC-SEEEEEEEEEEETTC-----CBCCCEEEE
T ss_pred CEEEEEEEEEeCC-CCEEEEEEEECC--EEecccccCCEEEEE----EcC-CccEEEEEEEEECCC-----CEEeeeEEE
Confidence 3455778888876 334567777653 1111121111 0111 111 589999999999871 234577888
Q ss_pred EEEEe
Q psy1041 253 IKVEQ 257 (1095)
Q Consensus 253 I~V~d 257 (1095)
|+|.+
T Consensus 84 vtV~~ 88 (98)
T 3pe9_A 84 IFVKQ 88 (98)
T ss_dssp EEEEC
T ss_pred EEECc
Confidence 88763
No 68
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.46 E-value=14 Score=32.60 Aligned_cols=74 Identities=15% Similarity=0.176 Sum_probs=44.8
Q ss_pred EEEEEEcCCCCCCceEEEEEEeCCCCCCCEEEeC-CceEEEEcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEe
Q psy1041 983 AILSASDPDLGQGGVVRYTIVSDNEADDVFSIDR-LTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus 983 ~~v~A~D~D~g~n~~v~Y~i~~~~~~~~~F~Id~-~tG~i~~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~d 1061 (1095)
.+|.++-.+. ++..++|.+...... ....+.. .+-.++... ...+.|.|+++++|..+ ++++.++.|.|..
T Consensus 24 v~L~gs~S~D-Dg~~lsY~W~~~~Gp-~~~~l~~~~~~~~~~t~----~~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~ 95 (102)
T 2yrl_A 24 TTLDGSKSSD-DQKIISYLWEKTQGP-DGVQLENANSSVATVTG----LQVGTYVFTLTVKDERN--LQSQSSVNVIVKE 95 (102)
T ss_dssp EEEECCTTCS-SSCBCCCCEEEEESC-TTCEEESTTSSEEEEES----CCSSEEEEEEEEEBTTC--CEEEEEEEEEEEC
T ss_pred EEEEeEeccC-CCCeEEEEEEECCCC-ceeEEccCCCccEEEEC----CCCeEEEEEEEEEeCCC--CEEEeEEEEEEcC
Confidence 3465543322 355678887652222 1234432 223344332 24679999999999876 5888999999987
Q ss_pred cCC
Q psy1041 1062 VNE 1064 (1095)
Q Consensus 1062 vNd 1064 (1095)
.+.
T Consensus 96 ~~~ 98 (102)
T 2yrl_A 96 ESG 98 (102)
T ss_dssp CSS
T ss_pred CCC
Confidence 553
No 69
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=69.95 E-value=30 Score=30.25 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=41.0
Q ss_pred CeEEEEEEEEeCCCCCCceEEEEecCCCcceEEeCCcc-eEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEE
Q psy1041 872 GTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATG-SLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVR 950 (1095)
Q Consensus 872 gt~v~~v~A~D~D~g~n~~v~Ysl~~~~~~F~Id~~tG-~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~ 950 (1095)
+.+.+...|.|.|. .=.++.|++.+. ...-+...- ...+.. . .+.|.|+++|+|..|. ......|.
T Consensus 17 ~~v~i~a~A~D~dg-~V~kVef~vdg~--~vg~dt~apy~~~w~~----~-~G~htl~a~AtD~~G~-----~~tS~~v~ 83 (98)
T 3pe9_A 17 EFLKITATASDSDG-KISRVDFLVDGE--VIGSDREAPYEYEWKA----V-EGNHEISVIAYDDDDA-----ASTPDSVK 83 (98)
T ss_dssp SEEEEEEEECCSSS-CEEEEEEEETTE--EEEEECSSSEEEEEEC----C-SEEEEEEEEEEETTCC-----BCCCEEEE
T ss_pred CEEEEEEEEEeCCC-CEEEEEEEECCE--EecccccCCEEEEEEc----C-CccEEEEEEEEECCCC-----EEeeeEEE
Confidence 45667788888763 234677777432 111221111 111111 1 5889999999999873 33456777
Q ss_pred EEEec
Q psy1041 951 VTIDD 955 (1095)
Q Consensus 951 I~V~D 955 (1095)
|+|.+
T Consensus 84 vtV~~ 88 (98)
T 3pe9_A 84 IFVKQ 88 (98)
T ss_dssp EEEEC
T ss_pred EEECc
Confidence 77753
No 70
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=63.04 E-value=1.6e+02 Score=31.28 Aligned_cols=181 Identities=16% Similarity=0.301 Sum_probs=93.6
Q ss_pred ccCCccEEEEeecCCCCcEEEEEEEeeCCCCCCceEEEEEecCCC---CCcEEecccceEEEc----------eecc---
Q psy1041 486 FDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKP---VPFEIDHFSGVIKTT----------QVLD--- 549 (1095)
Q Consensus 486 f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~ysi~~~~~---~~F~Id~~tG~i~~~----------~~lD--- 549 (1095)
|.+. ..+|.|+. |+.-.+|.-+-.+.+....+.|...++.. .-|. +.+|.|... ..+|
T Consensus 14 f~~~--~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~F~~Get~kti~V~IidD~~ 87 (295)
T 3us9_A 14 FEQG--TYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVVFKPGETQKEIRVGIIDDDI 87 (295)
T ss_dssp ESCS--EEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBC--CCCEEEEECSSCCEEEEEECCCCCSS
T ss_pred ecCC--eEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCcc--ccceEEEECCCceEEEEEEEEeCCCc
Confidence 4454 45788986 66767777666455456678998776532 1222 123443332 1122
Q ss_pred ccccccEEEEEEEEEEC-------------Cc--CCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEE
Q psy1041 550 YESMRREYILRVRASDW-------------GL--PYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITL 614 (1095)
Q Consensus 550 ~E~~~~~~~l~V~a~D~-------------g~--p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v 614 (1095)
+|. ...|.+.+..--. +. +..+......+|+|.| ||++|.|.-..-...|.|+. |...++|
T Consensus 88 ~E~-~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V 163 (295)
T 3us9_A 88 FEE-DKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKV 163 (295)
T ss_dssp CCC-CEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEE
T ss_pred ccC-ceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEE
Confidence 333 3344444432110 00 1112222345677776 58889876555567888974 6666666
Q ss_pred EEEeCCCCC-eEEEEEEeCCCC---CcEEEeCCCcEEEEeeccCcccccEEEEEEEEecCCCccceEEEEEEE
Q psy1041 615 SAIDFDAGN-IISYRIVSGNED---GCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINL 683 (1095)
Q Consensus 615 ~A~D~D~~~-~i~y~i~~~~~~---~~F~Id~~tG~i~~~~~ld~~~~~~~~l~V~atD~~~~s~~~~v~I~v 683 (1095)
.-+-.-.+. .+.|....|... .-|. ..+|.|..... ...-.+.|...|.......-.+.|.+
T Consensus 164 ~Rs~~~~g~VtV~y~T~~GTA~~g~~DY~--~~sgtLtF~~G-----et~kti~V~IidD~~~E~dEtF~V~L 229 (295)
T 3us9_A 164 LRTSGARGNVIVPYKTIEGTARGGGEDFE--DTCGELEFQND-----EIVKTISVKVIDDEEYEKNKTFFLEI 229 (295)
T ss_dssp EEESCCCSCEEEEEEEECCSSCTTTTSEE--CCEEEEEECTT-----CCCEEEEEEECCCSCCCSCEEEEEEE
T ss_pred EEEcCCCccEEEEEEecCCCccCCccccc--ccceEEEecCC-----ceEEEEEEEEcCCCCcCCceEEEEEE
Confidence 554333333 788887766442 2343 34566655422 12334555555544433344455544
No 71
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.90 E-value=16 Score=32.24 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=27.6
Q ss_pred CCcEEEEEEEEeecCccccCCCCcceEEEEEEEEeccC
Q psy1041 223 DRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINL 260 (1095)
Q Consensus 223 ~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~dvNd 260 (1095)
..+.|.|+++++|.. +.+++.++.|+|...+.
T Consensus 67 ~~G~y~f~LTVtD~~------G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDER------NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTT------CCEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCC------CCEEEeEEEEEEcCCCC
Confidence 467999999999987 78899999999987654
No 72
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=53.81 E-value=60 Score=31.17 Aligned_cols=75 Identities=15% Similarity=0.163 Sum_probs=35.4
Q ss_pred EEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCCCC-CCCEEEeCCceEEEE
Q psy1041 945 ADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEA-DDVFSIDRLTGTIRV 1023 (1095)
Q Consensus 945 ~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~-~~~F~Id~~tG~i~~ 1023 (1095)
..+.+.+.|.| ||..+.|....-...|.|+. |..-.+|.-+-.+.+..-.|.|+...+... ..-|. +.+|.|..
T Consensus 8 ~~~~~~~~i~d-dd~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~F 82 (160)
T 3gin_A 8 HSAALEVLFQG-PGPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVVF 82 (160)
T ss_dssp --------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBC--CCEEEEEE
T ss_pred ccceEEEEEec-CCCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCcc--ccceEEEE
Confidence 44566777777 34466665555556788984 666666655544544455788998875422 12233 23566554
Q ss_pred c
Q psy1041 1024 A 1024 (1095)
Q Consensus 1024 ~ 1024 (1095)
.
T Consensus 83 ~ 83 (160)
T 3gin_A 83 K 83 (160)
T ss_dssp C
T ss_pred c
Confidence 3
No 73
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=48.41 E-value=1e+02 Score=28.48 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=44.0
Q ss_pred CCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCCCCC-CCEEEeCCceEEEEcc----------c
Q psy1041 958 DNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEAD-DVFSIDRLTGTIRVAK----------P 1026 (1095)
Q Consensus 958 Dn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~~-~~F~Id~~tG~i~~~~----------~ 1026 (1095)
|+.+.+....-...|.|+. |....+|.-+- +......|.|+...+.... .-|. +.+|.|.... -
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gTA~~g~Dy~--~~~g~l~F~~Get~k~i~V~I 76 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIEV 76 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSSSCBTTTBC--CCEEEEEECTTCCEEEEEEEB
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCCcCCCCcEe--EeeEEEEECCCceEEEEEEEE
Confidence 4455544444455778874 56655555443 3334456889877653221 1232 2345544432 1
Q ss_pred C-CCCCCCEEEEEEEEEEC-CCCCce--eEEEEEEEEEecCCCCCCCeeecceEEEEEeCCC
Q psy1041 1027 L-DFEKRQVHSLVVRAKDN-GSPPLY--SEATLIVEVSDVNENMNAPVFSDFVYQATVKENQ 1084 (1095)
Q Consensus 1027 l-d~E~~~~~~l~V~A~D~-g~p~ls--~~~~v~I~V~dvNdn~~~P~F~~~~y~~~v~E~~ 1084 (1095)
+ |......-.|.|..... ++..+. ..++|+| .| | +++|.|.-..-...|.|+.
T Consensus 77 ~dD~~~E~~E~F~v~L~~p~~~a~lg~~~~atvtI--~d--d-D~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 77 IDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMI--LD--D-DHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp CCCSSCCCCEEEEEEEECCCTTCEECSCSEEEEEE--EC--C-C------------------
T ss_pred ecCCcccCcEEEEEEEECCCCCcEECCCcEEEEEE--EC--C-CCCCEEEECCCcEEEeccc
Confidence 2 22222333455555543 222222 3445555 44 2 3478865544455677764
No 74
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=43.31 E-value=29 Score=29.25 Aligned_cols=31 Identities=13% Similarity=0.323 Sum_probs=25.9
Q ss_pred CcCCCcEEEEEEEEeecCccccCCCCcceEEEEEEEE
Q psy1041 220 KYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256 (1095)
Q Consensus 220 d~e~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~ 256 (1095)
-|...+.|.++++++|.. +.+++.++.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~------G~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDK------GATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETT------SCEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECC------CCEEEEEEEEEEc
Confidence 466789999999999976 6778888888875
No 75
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=42.79 E-value=1.3e+02 Score=27.74 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=21.9
Q ss_pred cEEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEEeCCC
Q psy1041 755 PIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDN 795 (1095)
Q Consensus 755 ~~~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~y~i~~g~~ 795 (1095)
.....|.|+. |..-.+|.-+ .+......+.|+...|..
T Consensus 11 ~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 11 PGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTA 48 (137)
T ss_dssp SCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSS
T ss_pred CCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCc
Confidence 3456788875 4444555433 233335678888776643
No 76
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=37.02 E-value=90 Score=29.90 Aligned_cols=101 Identities=12% Similarity=0.092 Sum_probs=46.7
Q ss_pred EEEEEEEEecCCCCCCCCCCCceEEEeeCCCCCCcEEEEEEeeeCCCCCCeEEEEEEecCC----ccEEEEccccEEEEc
Q psy1041 141 TCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMN----EQFSIHPTSGVVTLT 216 (1095)
Q Consensus 141 ~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~~~----~~F~id~~tG~i~~~ 216 (1095)
++.+.|.|.| ||..+.|.-..-..+|.|+. |+.-++|.=.-.+.+....|.|...+.+ ..|. +..|.|...
T Consensus 9 ~~~~~~~i~d-dd~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~F~ 83 (160)
T 3gin_A 9 SAALEVLFQG-PGPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVVFK 83 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBC--CCEEEEEEC
T ss_pred cceEEEEEec-CCCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCcc--ccceEEEEc
Confidence 4567777777 55566655444455688975 5555555544455445567888876432 2233 235666554
Q ss_pred cCCCcCCCcEEEEEEEEeecCccccCCCCcceEEEEEEEEe
Q psy1041 217 RPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQ 257 (1095)
Q Consensus 217 ~~ld~e~~~~~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~d 257 (1095)
.- | ..-.+.|...|...+ -..-++.|.+.+
T Consensus 84 ~G---e--t~k~i~V~IidD~~~------E~~EtF~v~Ls~ 113 (160)
T 3gin_A 84 PG---E--TQKEIRVGIIDDDIF------EEDKNFLVHLSN 113 (160)
T ss_dssp TT---C--CEEEEEEEBCCCSCC------CCCEEEEEEEEE
T ss_pred CC---c--EEEEEEEEEECCCCc------cCceEEEEEECC
Confidence 21 1 223455555555432 234555555554
No 77
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=33.10 E-value=58 Score=27.32 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=25.0
Q ss_pred ccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEe
Q psy1041 917 LDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTID 954 (1095)
Q Consensus 917 LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~ 954 (1095)
.-|.....|.+++.++|..| .+.+.++.|+|.
T Consensus 53 hty~~~G~Y~v~LtVtd~~G------~~~t~~~~V~V~ 84 (85)
T 2y72_A 53 HAYKKAGTYNVTLKVTDDKG------ATATESFTIEIK 84 (85)
T ss_dssp EECSSCEEEEEEEEEEETTS------CEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEEECCC------CEEEEEEEEEEc
Confidence 34567789999999999886 566777777775
No 78
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=30.92 E-value=4.7e+02 Score=27.07 Aligned_cols=34 Identities=9% Similarity=0.211 Sum_probs=26.7
Q ss_pred cCcccccEEEEEEEEEeCCCCCCceeeeEEEEEEEeec
Q psy1041 442 LDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDT 479 (1095)
Q Consensus 442 LD~E~~~~y~l~V~a~D~g~~~~~~~~~~~v~I~V~Dv 479 (1095)
.-|.....|+++++++|.. +.+.+....|+|...
T Consensus 63 htY~~~GtYtVtLTVtD~~----G~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 63 YKYKNPGTYKVKLIVTDNQ----GASSSFTATIKVTSA 96 (260)
T ss_dssp ECCSSCEEEEEEEEEEETT----SCEEEEEEEEEEBCS
T ss_pred EEeCCCEEEEEEEEEEeCC----CCeEEEEEEEEECCC
Confidence 4577889999999999985 245677888888753
No 79
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=26.48 E-value=1.5e+02 Score=30.40 Aligned_cols=66 Identities=20% Similarity=0.215 Sum_probs=43.2
Q ss_pred EEEEEEe--CCCCCCCEEEeCCceEEEEcccCCCCCCCEEEEEEEEEEC---CCCCceeEEEEEEEEEecCCC
Q psy1041 998 VRYTIVS--DNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDN---GSPPLYSEATLIVEVSDVNEN 1065 (1095)
Q Consensus 998 v~Y~i~~--~~~~~~~F~Id~~tG~i~~~~~ld~E~~~~~~l~V~A~D~---g~p~ls~~~~v~I~V~dvNdn 1065 (1095)
.+|++.. +..-..+...|+.++.++=. |++ ...+.|.++|+|++. |....+++..+.|.|...|.|
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG~-P~~-~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~ 103 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEGL-PLD-TDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHN 103 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEEC-CCG-GGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEec-cCC-CCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCc
Confidence 3566554 22346789999999865433 333 356789999999965 333345677888999844333
No 80
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=24.73 E-value=3.4e+02 Score=27.73 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=36.6
Q ss_pred cceEEeCCcceEEEcccccccccCeeEEEEEEEeCCCCCCCcceeEEEEEEEEEe--ccCC
Q psy1041 900 QDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTID--DIND 958 (1095)
Q Consensus 900 ~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~~~~~~~~~~v~I~V~--DvND 958 (1095)
.+...|+.++.+. -.|++ ...+.|.+.|.|++.+.. +.....+...+.|.|. |.||
T Consensus 47 sWL~fd~~t~Tfs-G~P~~-~D~G~~~i~VtA~~~~~~-g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 47 SWLHWDPHSHILE-GLPLD-TDKGVHYISVSAARLGAN-GSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp TTEEEETTTTEEE-ECCCG-GGCEEEEEEEEEEEECTT-SCEEEEEEEEEEEEEESSCCC-
T ss_pred cceEEcCCCCeEE-eccCC-CCcceEEEEEEEeeccCC-CCccccccceEEEEEecCCCcc
Confidence 7889999999652 33444 456789999999865310 0223445667778887 6666
No 81
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=22.08 E-value=4.6e+02 Score=27.14 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=24.8
Q ss_pred CCccCCCEEEEEEEEEECCCCCCceeEEEEEEEEe
Q psy1041 814 LDRERTSEYTLNITVYDLGKPQKSTSKMLPITILD 848 (1095)
Q Consensus 814 LD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~D 848 (1095)
.-|.....|.++++++|..+ .+.+.+..|+|..
T Consensus 63 htY~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~ 95 (260)
T 2c4x_A 63 YKYKNPGTYKVKLIVTDNQG--ASSSFTATIKVTS 95 (260)
T ss_dssp ECCSSCEEEEEEEEEEETTS--CEEEEEEEEEEBC
T ss_pred EEeCCCEEEEEEEEEEeCCC--CeEEEEEEEEECC
Confidence 34677889999999999765 3456677777764
Done!