RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1041
(1095 letters)
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 107
Score = 86.6 bits (213), Expect = 8e-21
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 958 DNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRL 1017
+ AP F V V ED+ G + L A DPD Q + Y I +D ++++
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPA--RWLTVNKD 58
Query: 1018 TGTIRVAKPLDFE----KRQVHSLVVRAKDNGSPPLYSEATLIVEVSDV 1062
G + LD E K +++++ D+G TLI+ V DV
Sbjct: 59 NGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 70.8 bits (172), Expect = 3e-15
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 374 DNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPET 433
+ P F + VDV E II L D D + ++ +G + +N +
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLS-YFIGNDPARWLTVNKDN 59
Query: 434 GMLYTAVTLDAEDK----AFYTLTVSAIDQGNAGTRKQSAAKVKVNIVD 478
G++ LD E + YT+ + D G + + ++++D
Sbjct: 60 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV--GTGTGTLILHVLD 106
Score = 69.6 bits (169), Expect = 6e-15
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 481 DNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSG 540
+ P F V ++E+ G +I + A+D D + +SY I N ++ +G
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 541 VIKTTQVLDYES---MRREYILRVRASDWGLPYRRQTEMQLKIKLLDV 585
++ LD ES Y + + +D G+ T L + +LDV
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGT-GTLILHVLDV 107
Score = 64.6 bits (156), Expect = 3e-13
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 851 DNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQD-FAVDSATG 909
+ P F +++ V+E+ G I + A D D K+ Y + D V+ G
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 910 SLYVSASLDRE----RQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDI 956
+ + +LDRE + + Y + + +D + + + + + D+
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTD----DGVSVGTGTGTLILHVLDV 107
Score = 61.2 bits (147), Expect = 7e-12
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 747 HVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSG 806
P F + V+E + + ++A+D D K + D ++ D+G
Sbjct: 2 EAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQK-LSYFIGNDPARWLTVNKDNG 60
Query: 807 ELKVVGYLDRE----RTSEYTLNITVYDLGKPQKSTSKMLPITILDV 849
+ G LDRE + + YT+ + V D G + + L + +LDV
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 53.1 bits (126), Expect = 4e-09
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 9/111 (8%)
Query: 153 DLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSF-RDMNEQFSIHPTSG 211
+ P F P V EDL I+ + A+D D + ++ Y D +++ +G
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 212 VVTLTRPLKY----TDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQI 258
+VT L + + +++L D G + L + V +
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVS----VGTGTGTLILHVLDV 107
Score = 40.4 bits (93), Expect = 1e-04
Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Query: 587 DNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG-NIISYRIVSGNEDGCFALDITSG 645
+ P F V +L G +II+L A D D + + ++ +G
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60
Query: 646 VLSIACDL----TDVRVNEREINVTATDSA--HFSDVVRIRINL 683
+++ +L V+ N + + TD + + +++
Sbjct: 61 IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHV 104
Score = 34.2 bits (77), Expect = 0.015
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 1067 NAPVFSDFVYQATVKENQPIGTSL 1090
AP F V + V E+ G +
Sbjct: 2 EAPFFVPAVSRVDVSEDLSRGEKI 25
Score = 33.4 bits (75), Expect = 0.034
Identities = 13/115 (11%), Positives = 32/115 (27%), Gaps = 13/115 (11%)
Query: 36 RFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGD 95
F V +SE+ + + + ++ D ++ +
Sbjct: 5 FFVPAVSRVDVSEDLSRGEKII--SLVAQDPDKQQIQKLSYFIGNDPARWLTVNK----- 57
Query: 96 FWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLD 150
++ L+RE + + D + T + ++VLD
Sbjct: 58 -DNGIVTG----NGNLDRESEYVKNNTYTVIMLVTDDGVSVG-TGTGTLILHVLD 106
Score = 30.3 bits (67), Expect = 0.32
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 12/91 (13%)
Query: 284 IVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPL 343
I+ +V +D + DP + + LDRE +
Sbjct: 25 IISLVAQDPDKQQIQKLSYFIGNDPARWLTVNK---------DNGIVTGNGNLDRESEYV 75
Query: 344 G---YNLTLRAVDKGTPPRETYKATQVHLVD 371
Y + + D G +H++D
Sbjct: 76 KNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 113
Score = 78.9 bits (193), Expect = 5e-18
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 957 NDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLG---QGGVVRYTIVS---DNEADD 1010
NDN P F + VRE + GT V +SA+D D GV+ Y+I+ + +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 1011 VFSIDRLTGTIR-VAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061
+F+I+R TG I + LD EK ++L V+A D L E I++++D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 62.8 bits (151), Expect = 2e-12
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 373 NDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGK---NAQVFLEIVGGNEG----G 425
NDN+P F ++++ V E T ++ + +D DD N + I+ +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 426 EFNINPETGMLY-TAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVD 478
F IN ETG++ LD E YTLTV A D AG K + I D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG--LSVEGKAIIQITD 113
Score = 57.8 bits (138), Expect = 1e-10
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 9/113 (7%)
Query: 480 NDNDPLFDSPEMEVSINENEPAGTSVIKVTA---KDKDSGENAYISYSIANLKPVP---- 532
NDN P F S+ E GT V+ V+A D N +SYSI P
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 533 -FEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLD 584
F I+ +GVI EY L V+A+D E + I++ D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGA-GLSVEGKAIIQITD 113
Score = 56.2 bits (134), Expect = 4e-10
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLD---LGDNAKVVYSLMTDTQDFAVDS 906
NDN PKF + + V E GT + V+ATD D N + YS++ + + +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 907 A-------TGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955
+ LDRE+ Y L ++A+D +G L + + I D
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGA----GLSVEGKAIIQITD 113
Score = 53.9 bits (128), Expect = 2e-09
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 744 ENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGK-------LVFGISSGDND 796
+N + P+F V E V + + + A D D + ++
Sbjct: 1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 797 SVFRIDPDSGELKVVGY-LDRERTSEYTLNITVYDLGKPQKSTSKMLPITILD 848
++F I+ ++G + ++G LDRE+ EYTL + DL S I I D
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 43.5 bits (101), Expect = 1e-05
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 8/115 (6%)
Query: 36 RFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGD 95
+FTQ + S+ E T V ++ S +D +
Sbjct: 7 KFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTIN 66
Query: 96 FWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLD 150
+I D RE+ +Y L ++AT D + A K + + D
Sbjct: 67 RETGVISLIGTGLD---REKFPEYTLTVQAT----DLEGAGL-SVEGKAIIQITD 113
Score = 42.3 bits (98), Expect = 2e-05
Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 14/115 (12%)
Query: 152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIY---------YSFRDMNE 202
ND P F + +V E + T ++ VSA D D + +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 203 QFSIHPTSGVVTLTRPLK-YTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256
F+I+ +GV++L + L V D G G K I++
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLE----GAGLSVEGKAIIQIT 112
Score = 42.0 bits (97), Expect = 4e-05
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 586 NDNRPQFEKVDCLGHVPRNLPIGREIITLSAID-----FDAGNIISYRIVSGNED----G 636
NDNRP+F + G V + G +++ +SA D ++SY I+ + +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61
Query: 637 CFALDITSGVLSIACDLTDVRVNER-EINVTATDSAH--FSDVVRIRINLV 684
F ++ +GV+S+ D + V ATD S + I +
Sbjct: 62 LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQIT 112
Score = 39.3 bits (90), Expect = 3e-04
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1064 ENMNAPVFSDFVYQATVKENQPIGTSL 1090
+N N P F+ V++ +V+E GT +
Sbjct: 1 QNDNRPKFTQDVFRGSVREGVQPGTQV 27
Score = 30.0 bits (66), Expect = 0.50
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 337 DREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVD 371
DRE P Y LT++A D + + D
Sbjct: 80 DREKFPE-YTLTVQATDLEGAGLSVEGKAIIQITD 113
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 112
Score = 78.2 bits (191), Expect = 6e-18
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 957 NDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQG---GVVRYTIVSDNE---ADD 1010
NDN P F + V E GT V +SA+D D + YTIVS + +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 1011 VFSIDRLTGTIRVAKPL-DFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061
+F+++R TG I V D E ++LVV+A D L + A ++ V D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 62.4 bits (150), Expect = 2e-12
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 480 NDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSG---ENAYISYSIANLKPVP---- 532
NDN P F E S+ E GTSV+KV+A D D NA I+Y+I + P
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 533 -FEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLD 584
F ++ +GVI Y L V+A+D T + I + D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGE-GLSTTAKAVITVKD 112
Score = 62.1 bits (149), Expect = 3e-12
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 373 NDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDG---KNAQVFLEIVGGNEGG---- 425
NDN+P F +E++E V E T ++++ +DADD NA + IV +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 426 EFNINPETGMLYTAVTL-DAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVD 478
F +N +TG++ + D E YTL V A D G + AK + + D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG--LSTTAKAVITVKD 112
Score = 56.7 bits (135), Expect = 3e-10
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGD---NAKVVYSLMTDTQD----- 901
NDN P+F + + V E A+ GT + KV+ATD D NA + Y++++ +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 902 -FAVDSATGSLYVSASL-DRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955
F V+ TG + V S DRE Y L ++A+D G L A +T+ D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGE----GLSTTAKAVITVKD 112
Score = 50.9 bits (120), Expect = 3e-08
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 745 NVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLG---YNGKLVFGISSGDNDS---- 797
N + PEF E V E +++ K+ A D D YN + + I S D +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 798 VFRIDPDSGELKVVGYLD-RERTSEYTLNITVYDLGKPQKSTSKMLPITILD 848
+F ++ D+G + V+ RE YTL + DL ST+ IT+ D
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 45.1 bits (105), Expect = 3e-06
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 586 NDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG-----NIISYRIVSGNEDGC--- 637
NDNRP+F + G V G ++ +SA D D I+Y IVS + +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 638 -FALDITSGVLSIACDLTD-VRVNEREINVTATDSAH--FSDVVRIRINL 683
F ++ +GV+S+ D + V A D S + I +
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITV 110
Score = 44.3 bits (103), Expect = 5e-06
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLG---RNGEIYYSFRDMNEQ----- 203
ND P F +E +V E TS+++VSA DAD N I Y+ + +
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60
Query: 204 -FSIHPTSGVVTLTRPL-KYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256
F+++ +GV+++ + LVV D G G ++AK I V+
Sbjct: 61 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQ----GEGLSTTAKAVITVK 111
Score = 42.8 bits (99), Expect = 2e-05
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 12/117 (10%)
Query: 36 RFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVD--IRFKISSGDRDKFFKAEERLV 93
FTQ+ + S++E + T V + + I + I S D + K +
Sbjct: 6 EFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTV- 64
Query: 94 GDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLD 150
+ +I T +RE Y L ++A D + TT K + V D
Sbjct: 65 -NRDTGVISVLTSGL---DRESYPTYTLVVQAA----DLQGEGL-STTAKAVITVKD 112
Score = 35.9 bits (81), Expect = 0.006
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 1065 NMNAPVFSDFVYQATVKENQPIGTSL 1090
N N P F+ V++ +V E GTS+
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSV 26
Score = 26.6 bits (57), Expect = 6.7
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 5/109 (4%)
Query: 263 PEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPG 322
E++ S+ + + + D D + + IV DP+ + + T ++
Sbjct: 9 QEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFT-VNR- 66
Query: 323 TKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVD 371
V+ LDRE P Y L ++A D T + + D
Sbjct: 67 --DTGVISVLTSGLDRESYPT-YTLVVQAADLQGEGLSTTAKAVITVKD 112
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 113
Score = 73.5 bits (179), Expect = 3e-16
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 957 NDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDR 1016
NDNAP F Y+ V E+ +G V LS +D D+ + F+I
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 1017 LTGT----IRVAKPLDFEKRQVHSLVVRAKDN---GSPPLYSEATLIVEVSDV 1062
+ + AK LDFE R+ + L + ++ P S AT+ V V DV
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 62.3 bits (150), Expect = 2e-12
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 373 NDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGE-----F 427
NDN P+FD + Y VPE + RL V+D D G
Sbjct: 2 NDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 428 NINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSA-AKVKVNIVD 478
+ G+L TA LD E + Y L ++ + ++ A V V + D
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112
Score = 60.4 bits (145), Expect = 1e-11
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQ-------DF 902
NDN P F+ + V EN + G + +++ TDLD+
Sbjct: 2 NDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 903 AVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDI 956
+S G L + LD E + Y L+I + + + + + A V VT++D+
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFS-VPLPTSTATVTVTVEDV 113
Score = 55.8 bits (133), Expect = 5e-10
Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 8/113 (7%)
Query: 480 NDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPV--PFEID- 536
NDN P+FD + ENE G V +++ D D F I
Sbjct: 2 NDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 537 --HFSGVIKTTQVLDYESMRREYILRVRASDWGL--PYRRQTEMQLKIKLLDV 585
+ I TT +R++Y+L++ + + + + + DV
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 46.5 bits (109), Expect = 9e-07
Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 7/112 (6%)
Query: 745 NVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPD 804
N + P F V E+ + G + F I D
Sbjct: 2 NDNAPIFDPKTYTALVPENEIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTD 61
Query: 805 SG----ELKVVGYLDRERTSEYTLNITVYD---LGKPQKSTSKMLPITILDV 849
L LD E +Y L ITV + P +++ + +T+ DV
Sbjct: 62 PESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 46.5 bits (109), Expect = 1e-06
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSF---RDMNEQFSIHP 208
ND P+F P Y VPE+ + + R+S D D+ + + F+I
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 209 ----TSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQI 258
G++T + L + R + L + ++ F S+A + + VE +
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVEN-AEPFSVPLPTSTATVTVTVEDV 113
Score = 40.0 bits (92), Expect = 2e-04
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 13/110 (11%)
Query: 586 NDNRPQFEKVDCLGHVPRNLPIGREIITLSAID-FDAGNIISYRIVSGNEDGCFALDITS 644
NDN P F+ VP N IG E+ LS D G + + +IT+
Sbjct: 2 NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 645 GVLSIACDLTDVRVNERE------INVTATDSAH-----FSDVVRIRINL 683
S LT + + E + +T ++ + + + +
Sbjct: 61 DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTV 110
Score = 36.5 bits (83), Expect = 0.003
Identities = 20/115 (17%), Positives = 29/115 (25%), Gaps = 9/115 (7%)
Query: 36 RFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGD 95
F K Y + EN GT +KI + F +
Sbjct: 7 IFDPKTYTALVPENEIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQ 66
Query: 96 FWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLD 150
L+ E + +Y+L I +T V V V D
Sbjct: 67 GILT-------TAKGLDFELRKQYVLQITVENAEPFSVPLPT--STATVTVTVED 112
Score = 31.5 bits (70), Expect = 0.17
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 1065 NMNAPVFSDFVYQATVKENQPIGTSL 1090
N NAP+F Y A V EN+ G +
Sbjct: 2 NDNAPIFDPKTYTALVPENEI-GFEV 26
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 114
Score = 72.8 bits (177), Expect = 5e-16
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 957 NDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQ--GGVVRYTIVSDNE---ADDV 1011
NDN P F ++ V E GT V ++A D D G++RY IVS + ++
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 1012 FSIDRLTGTIRV-AKPLDFEKRQVHSLVVRAKDNGSPP---LYSEATLIVEVSD 1061
F+I+ TG I A LD EK Q ++L+++A D P L + AT ++ V+D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 63.6 bits (153), Expect = 1e-12
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Query: 373 NDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDG--KNAQVFLEIVGGNEGGE---- 426
NDN+P F +++ VPE + T ++ + DADD N + IV
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 427 FNINPETGMLYTAVTL-DAEDKAFYTLTVSAIDQGNAGTRKQSA-AKVKVNIVD 478
F IN ETG + T D E YTL + A D T S A + + D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 61.3 bits (147), Expect = 6e-12
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 480 NDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAY-------ISYSIANLKPVP 532
NDN P F S+ E GT V+ VTA D D +S + + P
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 533 FEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVND 587
F I++ +G I T ++Y L ++A+D ++ V D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATA-VITVTD 114
Score = 61.3 bits (147), Expect = 6e-12
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLM--------TDTQD 901
NDN P+F + + V E + GT + V A D D + +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 902 FAVDSATGSLYV-SASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955
F +++ TG + +A LDRE+ Y L I+A+D +G N Y L A +T+ D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEG-NPTYGLSNTATAVITVTD 114
Score = 46.2 bits (108), Expect = 1e-06
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 745 NVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGK------LVFGISSGDNDSV 798
N + PEF V E + + + A D D +V S + ++
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 799 FRIDPDSGELKV-VGYLDRERTSEYTLNITVYDLG-KPQKSTSKMLPITILDVND 851
F I+ ++G++ LDRE+ +YTL I D+ P S I V D
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVI-TVTD 114
Score = 45.5 bits (106), Expect = 2e-06
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 10/114 (8%)
Query: 152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFR--------DMNEQ 203
ND P F + +VPE T ++ V+A DAD +R
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 204 FSIHPTS-GVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256
F+I+ + ++T+ L + L++ D G ++A I V
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPT-YGLSNTATAVITVT 113
Score = 40.1 bits (92), Expect = 2e-04
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 586 NDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGN----IISYRIVSGN----EDGC 637
NDNRP+F G VP G ++T++AID D N ++ YRIVS
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60
Query: 638 FALDITSGVLSIACDLTDVRVNER-EINVTATD-----SAHFSDVVRIRINL 683
F ++ +G + D ++ + + ATD + S+ I +
Sbjct: 61 FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITV 112
Score = 39.3 bits (90), Expect = 3e-04
Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 6/115 (5%)
Query: 36 RFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGD 95
F + +N S+ E S TYV + + + + +
Sbjct: 6 EFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNMFTI-N 64
Query: 96 FWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLD 150
I T +RE+ +Y L I+A T +G T + V D
Sbjct: 65 NETGDIITVAAGL---DREKVQQYTLIIQA--TDMEGNPTYGLSNTATAVITVTD 114
Score = 35.5 bits (80), Expect = 0.008
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 1065 NMNAPVFSDFVYQATVKENQPIGTSL 1090
N N P F V+ +V E GT +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYV 26
Score = 30.8 bits (68), Expect = 0.28
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 345 YNLTLRAVDKGTPPRETYKATQVHLVDLND 374
Y L ++A D P T ++ + D
Sbjct: 85 YTLIIQATDMEGNPTYGLSNTATAVITVTD 114
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 72.5 bits (177), Expect = 6e-16
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 961 PNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVS---DNEADDVFSIDRL 1017
P + + E+ G L + + G V Y+I D VF I+R
Sbjct: 1 PLGSWVIPPISCPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59
Query: 1018 TGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061
TG ++V +PLD E+ ++L A + + +++ V+D
Sbjct: 60 TGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 59.7 bits (144), Expect = 2e-11
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 754 FPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDS----VFRIDPDSGELK 809
PI NE P ++ + GK+ + I+ D+ VF I+ ++G LK
Sbjct: 8 PPISCPENEKGP---FPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLK 64
Query: 810 VVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILD 848
V LDRER + YTL + IT+ D
Sbjct: 65 VTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 57.8 bits (139), Expect = 7e-11
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 377 PVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVG----GNEGGEFNINPE 432
P+ I + PE P +++ ++ K +VF I G G F I E
Sbjct: 1 PLGSWVIPPISCPENEKGPFPKNLVQI-KSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59
Query: 433 TGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVD 478
TG L LD E A YTL A+ G + ++ + + D
Sbjct: 60 TGWLKVTEPLDRERIATYTLFSHAVSSN--GNAVEDPMEILITVTD 103
Score = 57.0 bits (137), Expect = 2e-10
Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 854 PKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQD------FAVDSA 907
P + EN G + + KV YS+ D F ++
Sbjct: 1 PLGSWVIPPISCPENE-KGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59
Query: 908 TGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955
TG L V+ LDRER Y L A +G + + +T+ D
Sbjct: 60 TGWLKVTEPLDRERIATYTLFSHAVSSNGN----AVEDPMEILITVTD 103
Score = 55.5 bits (133), Expect = 5e-10
Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Query: 493 VSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPV-----PFEIDHFSGVIKTTQV 547
+S ENE G + + + + YSI F I+ +G +K T+
Sbjct: 10 ISCPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEP 68
Query: 548 LDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLD 584
LD E Y L A + M++ I + D
Sbjct: 69 LDRE-RIATYTLFSHAVSSNGN-AVEDPMEILITVTD 103
Score = 51.3 bits (122), Expect = 1e-08
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 11/97 (11%)
Query: 166 TVPEDLPLHTSILRVSAEDADLGRNGEIYYSF------RDMNEQFSIHPTSGVVTLTRPL 219
+ PE+ + ++ + G+++YS F I +G + +T PL
Sbjct: 11 SCPENEKG-PFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPL 69
Query: 220 KYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256
+ + L G ++ I V
Sbjct: 70 DRERIATYTLFSHAVSSN----GNAVEDPMEILITVT 102
Score = 38.6 bits (89), Expect = 5e-04
Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 9/92 (9%)
Query: 601 VPRNLPIGREIITLSAIDFDAG--NIISYRIVSGNED----GCFALDITSGVLSIACDLT 654
P N G L I + + Y I D G F ++ +G L + L
Sbjct: 12 CPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLD 70
Query: 655 DVRVNEREINVTATD--SAHFSDVVRIRINLV 684
R+ + A D + I I +
Sbjct: 71 RERIATYTLFSHAVSSNGNAVEDPMEILITVT 102
Score = 33.2 bits (75), Expect = 0.032
Identities = 14/102 (13%), Positives = 26/102 (25%), Gaps = 13/102 (12%)
Query: 273 IVEQSYADIYAIVRVVDRDAGIHGEIA---SLDIVDGDPDGHFRIVPTKIDPGTKKKEYN 329
E + + + G++ + D P G F I + T +
Sbjct: 12 CPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFII-----ERETGWLKVT 66
Query: 330 IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVD 371
+ + Y L AV E + + D
Sbjct: 67 EPLDRERIAT-----YTLFSHAVSSNGNAVEDPMEILITVTD 103
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog
(Xenopus laevis) [TaxId: 8355]}
Length = 100
Score = 71.3 bits (174), Expect = 1e-15
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 970 VKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEAD---DVFSIDRLTGTIRVAKP 1026
+KV E+ G L + + V Y+I + VF I+ TG + V +P
Sbjct: 7 IKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 1027 LDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061
LD E+ + L A P+ + + V D
Sbjct: 66 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 60.9 bits (147), Expect = 5e-12
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 750 EFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDND----SVFRIDPDS 805
++ PI++ NE P +++ + K+ + I+ D VFRI+ ++
Sbjct: 1 DWVIPPIKVSENERGP---FPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWET 57
Query: 806 GELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILD 848
G + V LDRE +Y L+ + I ++D
Sbjct: 58 GWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 57.5 bits (138), Expect = 1e-10
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 8/97 (8%)
Query: 493 VSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVP-----FEIDHFSGVIKTTQV 547
+ ++ENE G ++ + + YSI F I+ +G + T+
Sbjct: 7 IKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 548 LDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLD 584
LD E +Y+L A + M++ I ++D
Sbjct: 66 LDRE-EYDKYVLSSHAVSENGS-PVEEPMEITINVID 100
Score = 57.1 bits (137), Expect = 1e-10
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 383 IYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEG----GEFNINPETGMLYT 438
I + V E P RL ++ + +V+ I G G F I ETG +
Sbjct: 4 IPPIKVSENERGPFPK-RLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLV 62
Query: 439 AVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVD 478
LD E+ Y L+ A+ + G+ + ++ +N++D
Sbjct: 63 TRPLDREEYDKYVLSSHAVSEN--GSPVEEPMEITINVID 100
Score = 54.4 bits (130), Expect = 1e-09
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Query: 863 FRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQD------FAVDSATGSLYVSAS 916
+V+EN G ++ + KV YS+ D F ++ TG + V+
Sbjct: 7 IKVSENE-RGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 917 LDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955
LDRE D Y L A +G + + + + D
Sbjct: 66 LDREEYDKYVLSSHAVSENG----SPVEEPMEITINVID 100
Score = 50.9 bits (121), Expect = 2e-08
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 11/97 (11%)
Query: 166 TVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQ------FSIHPTSGVVTLTRPL 219
V E+ R+ ++ R ++YYS F I +G + +TRPL
Sbjct: 8 KVSENERG-PFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPL 66
Query: 220 KYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256
+ + L G ++ I V
Sbjct: 67 DREEYDKYVLSSHAVSEN----GSPVEEPMEITINVI 99
Score = 41.3 bits (96), Expect = 4e-05
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Query: 601 VPRNLPIGREIITLSAIDFDAG--NIISYRIVSGNED----GCFALDITSGVLSIACDLT 654
V N G L I + N + Y I D G F ++ +G + + L
Sbjct: 9 VSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLD 67
Query: 655 DVRVNEREINVTATD--SAHFSDVVRIRINLV 684
++ ++ A + + + I IN++
Sbjct: 68 REEYDKYVLSSHAVSENGSPVEEPMEITINVI 99
Score = 28.2 bits (62), Expect = 1.5
Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 7/99 (7%)
Query: 273 IVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVV 332
+ E + + + ++ I D + V +I+ T +
Sbjct: 9 VSENERGPFPKRLVQIKSNKDRFNKV-YYSITGQGADNPPQGV-FRIEWETGWMLVTRPL 66
Query: 333 LKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVD 371
+ + Y L+ AV + P E ++++D
Sbjct: 67 DREEYDK-----YVLSSHAVSENGSPVEEPMEITINVID 100
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 69.5 bits (169), Expect = 7e-15
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 970 VKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVS---DNEADDVFSIDRLTGTIRVAKP 1026
+ + E+ G L + +RY++ D +F I+ ++G + V KP
Sbjct: 9 INLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 1027 LDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061
LD E L A D + + +++ V D
Sbjct: 68 LDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 56.0 bits (134), Expect = 3e-10
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 749 PEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDND----SVFRIDPD 804
++ PI L N P +++ N L + ++ D +F I+P
Sbjct: 2 SDWVIPPINLPENSRGP---FPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPI 58
Query: 805 SGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILD 848
SG+L V LDRE + + L D+ Q + I ++D
Sbjct: 59 SGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 54.1 bits (129), Expect = 2e-09
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 386 VDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVG----GNEGGEFNINPETGMLYTAVT 441
+++PE + P L + KN + + G G F INP +G L
Sbjct: 9 INLPENSRGPFPQ-ELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 442 LDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVD 478
LD E A + L A+D G + ++ + +N++D
Sbjct: 68 LDRELIARFHLRAHAVDIN--GNQVENPIDIVINVID 102
Score = 53.7 bits (128), Expect = 2e-09
Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 11/99 (11%)
Query: 863 FRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQD------FAVDSATGSLYVSAS 916
+ EN+ G ++ N + YS+ D F ++ +G L V+
Sbjct: 9 INLPENS-RGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 917 LDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDD 955
LDRE + L+ A D +G + + + + D
Sbjct: 68 LDRELIARFHLRAHAVDINGN----QVENPIDIVINVID 102
Score = 52.2 bits (124), Expect = 7e-09
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 493 VSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVP-----FEIDHFSGVIKTTQV 547
+++ EN G ++ +N + YS+ F I+ SG + T+
Sbjct: 9 INLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 548 LDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLD 584
LD E + + LR A D + + + + I ++D
Sbjct: 68 LDRE-LIARFHLRAHAVDINGN-QVENPIDIVINVID 102
Score = 47.1 bits (111), Expect = 4e-07
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 11/97 (11%)
Query: 166 TVPEDLPLHTSILRVSAEDADLGRNGEIYYSF------RDMNEQFSIHPTSGVVTLTRPL 219
+PE+ + + +N + YS + F I+P SG +++T+PL
Sbjct: 10 NLPENSRG-PFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 68
Query: 220 KYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVE 256
+ L D G + + I V
Sbjct: 69 DRELIARFHLRAHAVDIN----GNQVENPIDIVINVI 101
Score = 36.4 bits (83), Expect = 0.003
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 601 VPRNLPIGREIITLSAIDFDAG--NIISYRIVSGNED----GCFALDITSGVLSIACDLT 654
+P N G L I + Y + D G F ++ SG LS+ L
Sbjct: 11 LPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLD 69
Query: 655 DVRVNEREINVTATD--SAHFSDVVRIRINLV 684
+ + A D + + I IN++
Sbjct: 70 RELIARFHLRAHAVDINGNQVENPIDIVINVI 101
Score = 29.4 bits (65), Expect = 0.67
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 13/102 (12%)
Query: 273 IVEQSYADIYAIVRVVDRDAGIHGEI---ASLDIVDGDPDGHFRIVPTKIDPGTKKKEYN 329
+ E S + + + + + D P G F I P
Sbjct: 11 LPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPI---------SGQ 61
Query: 330 IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVD 371
+ V K LDRE+ ++L AVD E ++++D
Sbjct: 62 LSVTKPLDRELIA-RFHLRAHAVDINGNQVENPIDIVINVID 102
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 136
Score = 69.6 bits (169), Expect = 1e-14
Identities = 18/138 (13%), Positives = 48/138 (34%), Gaps = 11/138 (7%)
Query: 371 DLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNIN 430
++ K F ++Y +P+ P++ +K S+ + + Q +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYE------SSEPADFKV 58
Query: 431 PETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPE 490
E G +Y + + + A + T+++ V ++ T +P+ + E
Sbjct: 59 DEDGTVYAVRSFPLTAE-QAKFLIYAQ---DKETQEKWQVAVNLSREPTLTEEPMKEPHE 114
Query: 491 -MEVSINENEPAGTSVIK 507
E+ + ++
Sbjct: 115 IEEIVFPRQLAKHSGALQ 132
Score = 62.7 bits (151), Expect = 3e-12
Identities = 18/140 (12%), Positives = 41/140 (29%), Gaps = 12/140 (8%)
Query: 955 DINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSI 1014
+I F YS + +D+ G + + S+ + R V ++
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN-------RKRKVQYESSEPADFK 57
Query: 1015 DRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVF-SD 1073
GT+ + Q ++ A+D + + + V +S P+
Sbjct: 58 VDEDGTVYAVRSFPLTAEQ-AKFLIYAQDKET---QEKWQVAVNLSREPTLTEEPMKEPH 113
Query: 1074 FVYQATVKENQPIGTSLKPR 1093
+ + + R
Sbjct: 114 EIEEIVFPRQLAKHSGALQR 133
Score = 59.2 bits (142), Expect = 6e-11
Identities = 6/116 (5%), Positives = 30/116 (25%), Gaps = 9/116 (7%)
Query: 478 DTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDH 537
+ F + ++ G ++ V + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN-----RKRKVQYESSEPADFKVD 59
Query: 538 FSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFE 593
G + + + + ++++ + + + + ++ + + P E
Sbjct: 60 EDGTVYAVRSFPLTAEQAKFLIYAQDKET----QEKWQVAVNLSREPTLTEEPMKE 111
Score = 57.7 bits (138), Expect = 2e-10
Identities = 12/123 (9%), Positives = 32/123 (26%), Gaps = 10/123 (8%)
Query: 848 DVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSA 907
++ F + + S + ++ G + V ++ + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRK----VQYESSEPADFKVDE 60
Query: 908 TGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPN 967
G++Y S + + I A D + V ++ + P
Sbjct: 61 DGTVYAVRSFPLTAEQ-AKFLIYAQDKE-----TQEKWQVAVNLSREPTLTEEPMKEPHE 114
Query: 968 YSV 970
Sbjct: 115 IEE 117
Score = 48.4 bits (114), Expect = 4e-07
Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 25/145 (17%)
Query: 36 RFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGD 95
F + Y+ + ++ + + + K S+ +R + + E D
Sbjct: 12 GFPEDVYSAVLPKDVHEGQPL----------------LNVKFSNCNRKRKVQYESSEPAD 55
Query: 96 FWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLN 155
F ++ I A E+ V+++ T
Sbjct: 56 FKVD-EDGTVYAVRSFPLTA-EQAKFLIYAQDKET------QEKWQVAVNLSREPTLTEE 107
Query: 156 PLFYPTEYEE-TVPEDLPLHTSILR 179
P+ P E EE P L H+ L+
Sbjct: 108 PMKEPHEIEEIVFPRQLAKHSGALQ 132
Score = 47.3 bits (111), Expect = 9e-07
Identities = 16/125 (12%), Positives = 33/125 (26%), Gaps = 10/125 (8%)
Query: 150 DTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPT 209
+ F Y +P+D+ +L V + + + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN----RKRKVQYESSEPADFKVDE 60
Query: 210 SGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQS 269
G V R ++ QD+ + K + + E P
Sbjct: 61 DGTVYAVRSFPL-TAEQAKFLIYAQDKETQEK-----WQVAVNLSREPTLTEEPMKEPHE 114
Query: 270 LPDIV 274
+ +IV
Sbjct: 115 IEEIV 119
Score = 37.3 bits (85), Expect = 0.002
Identities = 9/118 (7%), Positives = 34/118 (28%), Gaps = 8/118 (6%)
Query: 584 DVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDIT 643
++ + F + +P+++ G+ ++ + + + + Y + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYE----SSEPADFKVDE 60
Query: 644 SGVLSIACDLTDVRVNEREINVTATDSAHFS---DVVRIRINLVSARRIPEPGKTLEN 698
G + + + + + A D V + + +E
Sbjct: 61 DGTVYAVRSF-PLTAEQAKFLIYAQDKETQEKWQVAVNLSREPTLTEEPMKEPHEIEE 117
Score = 35.7 bits (81), Expect = 0.007
Identities = 11/114 (9%), Positives = 37/114 (32%), Gaps = 4/114 (3%)
Query: 288 VDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNL 347
+ +D + ++ + + + ++ ++ + ++
Sbjct: 22 LPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGTVYAVRSFPLTAEQ--AKF 79
Query: 348 TLRAVDKGTPPRETYKATQVHLVDLNDNKPVFD-REIYEVDVPETTPVNTPIIR 400
+ A DK T + A + +P+ + EI E+ P ++ ++
Sbjct: 80 LIYAQDKETQEK-WQVAVNLSREPTLTEEPMKEPHEIEEIVFPRQLAKHSGALQ 132
Score = 33.4 bits (75), Expect = 0.047
Identities = 10/113 (8%), Positives = 26/113 (23%), Gaps = 8/113 (7%)
Query: 745 NVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPD 804
+ F + + V L + + + + ++ +
Sbjct: 7 ALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRK------VQYESSEPADFKVDE 60
Query: 805 SGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFE 857
G + V + I D +K + ++ P E
Sbjct: 61 DGTVYAVRSFPLTAE-QAKFLIYAQDKETQEKWQ-VAVNLSREPTLTEEPMKE 111
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 107
Score = 55.9 bits (133), Expect = 4e-10
Identities = 19/111 (17%), Positives = 32/111 (28%), Gaps = 7/111 (6%)
Query: 957 NDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDR 1016
NDN P + + P V+ + SD D+ +S +
Sbjct: 1 NDNGPVP--SPRVFTMCDQNPEPQVL---TISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 1017 LTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMN 1067
GT + P K+ +S+ V D + P + V
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNP--QLTVVNATVCSCEGKAI 104
Score = 55.9 bits (133), Expect = 5e-10
Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 9/113 (7%)
Query: 480 NDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFS 539
NDN P+ + +T D D N Y +
Sbjct: 1 NDNGPVPSPRVFTMCDQNP-----EPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 540 GVIKTTQVLDYESMRRE-YILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQ 591
+ + + +++ Y + V SD + + + +
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTV---VNATVCSCEGKAIK 105
Score = 50.5 bits (119), Expect = 3e-08
Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 14/116 (12%)
Query: 850 NDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYS---LMTDTQDFAVDS 906
NDN P F + + V+ +D D+ N +D A
Sbjct: 1 NDNGPVPSPR--VFTMCDQNPEPQVL---TISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 907 ATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPN 962
+ G+ + + + ++ Y + + SD +V T+ A
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQN------NPQLTVVNATVCSCEGKAIK 105
Score = 48.9 bits (115), Expect = 1e-07
Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 10/113 (8%)
Query: 373 NDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQV-FLEIVGGNEGGEFNINP 431
NDN PV ++ + P +SDAD N + + G++
Sbjct: 1 NDNGPVPSPRVFTMCDQNPEPQVL-----TISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 432 ETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDP 484
G K Y++ V D N V +
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQN----NPQLTVVNATVCSCEGKAI 104
Score = 42.4 bits (98), Expect = 2e-05
Identities = 13/111 (11%), Positives = 30/111 (27%), Gaps = 8/111 (7%)
Query: 745 NVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDN-DSVFRIDP 803
N + P + P T D D+ N S + +
Sbjct: 1 NDNGPVPSPRVFTMCDQNPEPQVLT-----ISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 804 DSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPP 854
G ++ + + +Y++ + + D + T + T+
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTV--VNATVCSCEGKAI 104
Score = 33.1 bits (74), Expect = 0.045
Identities = 15/108 (13%), Positives = 28/108 (25%), Gaps = 8/108 (7%)
Query: 152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSG 211
ND P+ P + T+ + P ++ DAD+ N Y +
Sbjct: 1 NDNGPVPSPRVF--TMCDQNP---EPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELD 55
Query: 212 VVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQIN 259
+ L T + + + P + V
Sbjct: 56 SKGTSMLLSPTQQLKKGDYSI---YVLLSDAQNNPQLTVVNATVCSCE 100
Score = 29.3 bits (64), Expect = 0.87
Identities = 12/97 (12%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Query: 586 NDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSG 645
NDN P + P + + A + G++ A + G
Sbjct: 1 NDNGPVPSPRVF--TMCDQNPEPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSKG 58
Query: 646 VLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRIN 682
+ ++ + I V +D+ + + +
Sbjct: 59 TSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNAT 95
Score = 26.6 bits (57), Expect = 6.7
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 1065 NMNAPVFSDFVYQATVKENQPIGT 1088
N N PV S V+ T+ + P
Sbjct: 1 NDNGPVPSPRVF--TMCDQNPEPQ 22
Score = 26.6 bits (57), Expect = 7.0
Identities = 4/34 (11%), Positives = 9/34 (26%), Gaps = 2/34 (5%)
Query: 345 YNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPV 378
Y++ + D P+ T +
Sbjct: 74 YSIYVLLSDAQNNPQLTV--VNATVCSCEGKAIK 105
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Yeast (Hansenula saturnus) [TaxId: 4906]}
Length = 341
Score = 36.2 bits (82), Expect = 0.017
Identities = 14/69 (20%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Query: 395 NTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTV 454
+PI L G V+ + N G F N + Y D + + L
Sbjct: 15 PSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIV--PDIVEGDYTHLVS 72
Query: 455 SAIDQGNAG 463
Q N
Sbjct: 73 IGGRQSNQT 81
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Pseudomonas sp., strain ACP [TaxId: 306]}
Length = 338
Score = 34.7 bits (78), Expect = 0.049
Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 395 NTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTV 454
TPI L G ++ + N G F N + Y + +A + TL
Sbjct: 15 PTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEY--LIPEALAQGCDTLVS 72
Query: 455 SAIDQGNAG 463
Q N
Sbjct: 73 IGGIQSNQT 81
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 355
Score = 34.5 bits (78), Expect = 0.070
Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 6/120 (5%)
Query: 352 VDKGTPPRETYKATQVHLVDLNDNKPVFDRE-IYEVDVPETTPVNTPIIRLKVSDADDGK 410
+ P R T++ + + + I D+ + +TP++R+ G
Sbjct: 2 IRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILP-DILKKI-GDTPMVRINKIGKKFGL 59
Query: 411 NAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAA 470
++ + N GG L + + T+ GN G AA
Sbjct: 60 KCELLAKCEFFNAGGSVKDR---ISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAA 116
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 32.5 bits (72), Expect = 0.23
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 783 NGKLVFGISSGDND-SVFRIDPDSGELKVVG 812
+GK + + SV+ I + G L G
Sbjct: 286 SGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 316
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus
[TaxId: 274]}
Length = 351
Score = 30.1 bits (66), Expect = 1.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 388 VPETTPV------NTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTA 439
V E TPV +TP+I LK + K +++ + G N G F T + A
Sbjct: 15 VSEKTPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKA 72
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
synthase) {Haemophilus influenzae [TaxId: 727]}
Length = 310
Score = 29.1 bits (64), Expect = 2.5
Identities = 28/156 (17%), Positives = 42/156 (26%), Gaps = 14/156 (8%)
Query: 383 IYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTL 442
IY D + NTP++RLK G N V ++I G N M+
Sbjct: 2 IYA-DNSYSI-GNTPLVRLK----HFGHNGNVVVKIEGRNPSYSVKCRIGANMV-----W 50
Query: 443 DAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAG 502
AE T +D + T A V G
Sbjct: 51 QAEKDGTLTKGKEIVDATSGNTGIALA---YVAAARGYKITLTMPETMSLERKRLLCGLG 107
Query: 503 TSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHF 538
+++ G A +A+ + F
Sbjct: 108 VNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQF 143
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 477
Score = 28.8 bits (63), Expect = 3.6
Identities = 8/92 (8%), Positives = 24/92 (26%), Gaps = 8/92 (8%)
Query: 388 VPETTPV------NTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVT 441
+ + N+ + + ++++ G + G F T ++
Sbjct: 108 EIDDDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNR 167
Query: 442 LDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVK 473
L + + V G+ +
Sbjct: 168 LRKMKRP--VVGVGCASTGDTSAALSAYCASA 197
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 28.1 bits (62), Expect = 4.5
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 1010 DVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD--VNENMN 1067
+ + LT T R D EK + + ++ K +G P + + + +
Sbjct: 56 KMSLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPP 115
Query: 1068 APVF 1071
+
Sbjct: 116 ELIG 119
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea
seedling (Pisum sativum) [TaxId: 3888]}
Length = 441
Score = 27.6 bits (61), Expect = 9.9
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 862 SFRVTENALNGTVIFKVNATDLDLGDNAKVVYSL 895
F + + G VI + DL+ + +V+Y
Sbjct: 38 KFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKG 71
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.383
Gapped
Lambda K H
0.267 0.0608 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,004,782
Number of extensions: 195773
Number of successful extensions: 582
Number of sequences better than 10.0: 1
Number of HSP's gapped: 526
Number of HSP's successfully gapped: 103
Length of query: 1095
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 1000
Effective length of database: 1,103,246
Effective search space: 1103246000
Effective search space used: 1103246000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.4 bits)