Query psy10415
Match_columns 130
No_of_seqs 127 out of 430
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 17:19:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10415.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10415hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13231 PMT_2: Dolichyl-phosp 98.3 1.1E-05 2.3E-10 57.6 10.4 87 38-127 3-89 (159)
2 PF02366 PMT: Dolichyl-phospha 97.3 0.0017 3.7E-08 50.6 8.9 90 36-127 61-151 (245)
3 PRK13279 arnT 4-amino-4-deoxy- 96.8 0.017 3.6E-07 51.3 10.4 85 37-123 62-146 (552)
4 COG1807 ArnT 4-amino-4-deoxy-L 96.2 0.058 1.3E-06 46.7 10.3 85 36-126 63-150 (535)
5 TIGR03663 conserved hypothetic 96.1 0.071 1.5E-06 45.9 10.3 85 38-126 52-136 (439)
6 PF10131 PTPS_related: 6-pyruv 93.0 0.99 2.1E-05 40.6 9.7 85 35-120 2-86 (616)
7 PF04188 Mannosyl_trans2: Mann 91.0 1.2 2.7E-05 38.3 7.8 64 60-126 116-179 (443)
8 COG5617 Predicted integral mem 89.8 1.7 3.7E-05 40.4 7.9 73 34-107 67-139 (801)
9 KOG2647|consensus 88.1 1.6 3.5E-05 38.0 6.2 64 61-127 130-193 (444)
10 TIGR03766 conserved hypothetic 87.5 6.4 0.00014 34.1 9.7 56 46-102 127-183 (483)
11 COG1928 PMT1 Dolichyl-phosphat 81.3 7.2 0.00016 35.9 7.5 75 36-115 71-163 (699)
12 PF11028 DUF2723: Protein of u 80.8 13 0.00029 28.4 7.8 67 32-99 14-96 (178)
13 PF14264 Glucos_trans_II: Gluc 75.8 31 0.00066 27.7 9.0 76 35-116 27-107 (319)
14 COG5305 Predicted membrane pro 73.7 20 0.00043 32.3 7.9 84 38-124 98-181 (552)
15 PF09852 DUF2079: Predicted me 71.0 18 0.0004 30.9 6.9 66 37-104 42-107 (449)
16 COG4346 Predicted membrane-bou 63.2 46 0.00099 28.8 7.6 85 38-125 137-221 (438)
17 PF06728 PIG-U: GPI transamida 60.9 72 0.0016 26.9 8.5 89 37-127 58-160 (382)
18 TIGR03459 crt_membr carotene b 50.2 1.4E+02 0.0031 26.4 8.8 51 34-84 140-194 (470)
19 PF14063 DUF4254: Protein of u 41.8 18 0.00039 26.9 1.7 19 99-117 71-89 (145)
20 COG4745 Predicted membrane-bou 39.2 2E+02 0.0044 25.9 7.9 88 35-126 58-150 (556)
21 PF02516 STT3: Oligosaccharyl 35.3 36 0.00078 28.7 2.8 57 65-122 103-159 (483)
22 KOG3359|consensus 28.4 1.6E+02 0.0034 27.6 5.8 65 35-99 81-162 (723)
23 PF11278 DUF3079: Protein of u 24.4 16 0.00034 22.7 -0.9 17 95-111 5-21 (52)
24 PF11847 DUF3367: Domain of un 24.2 5E+02 0.011 24.2 8.2 77 34-112 52-130 (680)
25 PRK14471 F0F1 ATP synthase sub 21.5 1.7E+02 0.0036 21.4 4.0 28 55-82 2-29 (164)
No 1
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=98.32 E-value=1.1e-05 Score=57.60 Aligned_cols=87 Identities=24% Similarity=0.284 Sum_probs=76.4
Q ss_pred chHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHH
Q psy10415 38 RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGE 117 (130)
Q Consensus 38 RPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~ 117 (130)
-|+..+..+.-+.++|.++++.|+.|.+...+....+|.+.|++.+ +..+.+++++++.-|....-.. ..++|.+..
T Consensus 3 pPl~~~~~~~~~~l~G~~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~--~~~~~~~~~ 79 (159)
T PF13231_consen 3 PPLYFLLLALFFKLFGDSVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSA--SARPDMLLL 79 (159)
T ss_pred ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHH--HHhHHHHHH
Confidence 3888888899999999999999999999999999999999999987 6889999999999997666544 677799999
Q ss_pred HHHHHHHHhh
Q psy10415 118 RCTLEDLYVC 127 (130)
Q Consensus 118 ~f~l~~ll~~ 127 (130)
+|...+++..
T Consensus 80 ~~~~~~~~~~ 89 (159)
T PF13231_consen 80 FFFLLALYAF 89 (159)
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 2
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=97.34 E-value=0.0017 Score=50.58 Aligned_cols=90 Identities=21% Similarity=0.238 Sum_probs=74.4
Q ss_pred CcchHHhHHHHHHHHhcC-CCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHH
Q psy10415 36 SYRPLTVLTFRLNYLACG-LKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLI 114 (130)
Q Consensus 36 ~yRPL~~ls~~l~~~l~G-~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~l 114 (130)
.|.|.....-..++..+| .+.++.|..|.+.-.+...++|.+.|++.+++..|++++++++..|....--. ....|.
T Consensus 61 ~~p~~~~~~~~~~~~~~~~~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr--~~~~D~ 138 (245)
T PF02366_consen 61 GYPPLYYWISAIGFYYFGSVNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSR--YALLDS 138 (245)
T ss_pred cccchhhHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHH--HHhhHH
Confidence 467777777777778888 89999999999999999999999999999989999999999999987654422 345677
Q ss_pred HHHHHHHHHHHhh
Q psy10415 115 QGERCTLEDLYVC 127 (130)
Q Consensus 115 la~~f~l~~ll~~ 127 (130)
..++|.+.+++..
T Consensus 139 ~l~~f~~la~~~~ 151 (245)
T PF02366_consen 139 ILLFFILLAIYCL 151 (245)
T ss_pred HHHHHHHHHHHHH
Confidence 7788888877653
No 3
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=96.75 E-value=0.017 Score=51.30 Aligned_cols=85 Identities=13% Similarity=-0.018 Sum_probs=65.4
Q ss_pred cchHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHH
Q psy10415 37 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQG 116 (130)
Q Consensus 37 yRPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla 116 (130)
.=|+.+..-++-+.+||.+.++.++.+.+..++.++++|.+.+++.+++..|++++++++.-|.-... .- ..+.|.+-
T Consensus 62 KPPL~yWl~Als~~LFG~~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~-g~-~a~~D~~l 139 (552)
T PRK13279 62 KPIAGYWINSIGQWLFGDNNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGI-GT-YAVLDPMI 139 (552)
T ss_pred CCcHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HH-HHhhhHHH
Confidence 46888888888999999999999999999999999999999999988778899999888765542221 11 13455554
Q ss_pred HHHHHHH
Q psy10415 117 ERCTLED 123 (130)
Q Consensus 117 ~~f~l~~ 123 (130)
++|..++
T Consensus 140 ~~fi~la 146 (552)
T PRK13279 140 TLWLTAA 146 (552)
T ss_pred HHHHHHH
Confidence 5554444
No 4
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=96.19 E-value=0.058 Score=46.66 Aligned_cols=85 Identities=24% Similarity=0.212 Sum_probs=68.0
Q ss_pred CcchHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhh---
Q psy10415 36 SYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTY--- 112 (130)
Q Consensus 36 ~yRPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~--- 112 (130)
..=|+.+..-++-+.+||.+.++-++.+.+.+.+.++++|.+.+++.++ ..|++++++.+.-|.- ...+|.
T Consensus 63 ~kPPl~~Wl~a~~~~lfG~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~-----~~~~~~~~~ 136 (535)
T COG1807 63 EKPPLVYWLQALSYLLFGVNEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLF-----FLIGRLALL 136 (535)
T ss_pred CCCcHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHH-----HHHhHHHhh
Confidence 4578999999999999999999999999999999999999999999988 8899999988877753 233333
Q ss_pred HHHHHHHHHHHHHh
Q psy10415 113 LIQGERCTLEDLYV 126 (130)
Q Consensus 113 ~lla~~f~l~~ll~ 126 (130)
|..-++|..+++.+
T Consensus 137 D~~l~~f~~la~~~ 150 (535)
T COG1807 137 DAALAFFLTLALAL 150 (535)
T ss_pred hHHHHHHHHHHHHH
Confidence 34455555555543
No 5
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=96.12 E-value=0.071 Score=45.92 Aligned_cols=85 Identities=15% Similarity=0.083 Sum_probs=69.4
Q ss_pred chHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHH
Q psy10415 38 RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGE 117 (130)
Q Consensus 38 RPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~ 117 (130)
-|+....-++-+.+||.+.+..|+...++-++ +.+++.+.|+..++ ..++++|++.+.-|...- .--..|.|++-+
T Consensus 52 ~Pll~wl~A~~~~lFG~se~a~RL~~aL~g~~-v~l~~~~~r~~~~~-~~al~AAllla~sp~~~~--~sr~~~~D~~l~ 127 (439)
T TIGR03663 52 GPFLYHITAAVFHLFGISDATARLLPAVFGVL-LPLTAWLYRKRLGD-NEVLWAAVLLAFSPVMVY--YSRFMRNDIFVA 127 (439)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcCc-HHHHHHHHHHHHhHHHHH--HHHHHhHHHHHH
Confidence 38877777888999999999999999999954 67788888887765 589999999999998853 234678888888
Q ss_pred HHHHHHHHh
Q psy10415 118 RCTLEDLYV 126 (130)
Q Consensus 118 ~f~l~~ll~ 126 (130)
+|.+.+++.
T Consensus 128 ~f~~lal~~ 136 (439)
T TIGR03663 128 FFTLLAVGA 136 (439)
T ss_pred HHHHHHHHH
Confidence 888887764
No 6
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=92.97 E-value=0.99 Score=40.61 Aligned_cols=85 Identities=18% Similarity=0.107 Sum_probs=69.5
Q ss_pred CCcchHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHH
Q psy10415 35 GSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLI 114 (130)
Q Consensus 35 ~~yRPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~l 114 (130)
.+|-|+++.-.++-..+.|....+|.++=.+.-.+.++..|.+.|++.+ +..|+++|++|..-|-+....-|=..=.+.
T Consensus 2 ~FYpPL~yyl~a~l~~l~g~~~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~ 80 (616)
T PF10131_consen 2 RFYPPLPYYLGALLSLLFGNPIVAYKLFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPET 80 (616)
T ss_pred eeCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHH
Confidence 3578999988888888888777899999888888889999999999888 899999999999999888766555555555
Q ss_pred HHHHHH
Q psy10415 115 QGERCT 120 (130)
Q Consensus 115 la~~f~ 120 (130)
+|..+.
T Consensus 81 lA~~ll 86 (616)
T PF10131_consen 81 LAFALL 86 (616)
T ss_pred HHHHHH
Confidence 554433
No 7
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=91.00 E-value=1.2 Score=38.28 Aligned_cols=64 Identities=20% Similarity=0.225 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHHHHHHHHHHh
Q psy10415 60 HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGERCTLEDLYV 126 (130)
Q Consensus 60 h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~~f~l~~ll~ 126 (130)
.++|.+.|.+.+..++.+.++..+++..|..++++|..-|... -..+.=+|.+.+++.+.|++.
T Consensus 116 ~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi---F~sa~YsEslf~~lsf~gl~~ 179 (443)
T PF04188_consen 116 ILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI---FLSAPYSESLFALLSFAGLYL 179 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH---HhhcCccHHHHHHHHHHHHHH
Confidence 4678899999999999999998888899999999999999853 334444566655555555544
No 8
>COG5617 Predicted integral membrane protein [Function unknown]
Probab=89.84 E-value=1.7 Score=40.36 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=62.6
Q ss_pred CCCcchHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhH
Q psy10415 34 HGSYRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSD 107 (130)
Q Consensus 34 ~~~yRPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~ 107 (130)
-.+|-|++++..++--.+-|+.--.|.+.-.+.- ..+.++|.+.|+..+....|+++|++|..-|=|-+...+
T Consensus 67 lrYypPl~Yli~aal~~l~~d~~~t~~v~~~la~-llG~~~~~~~r~~g~t~~ia~I~alL~ltsp~~l~vlf~ 139 (801)
T COG5617 67 LRYYPPLSYLIGAALNFLLGDVVTTYAVFLMLAF-LLGAGGWLLWRLRGRTGFIALISALLWLTSPENLKVLFI 139 (801)
T ss_pred ceecCcHHHHHHHHHHHhhcChhHHHHHHHHHHH-HHHHHHHHHHHhhccccchHHHHHHHHHhChhheEEEEe
Confidence 4689999999999988888954558888877777 899999999999998889999999999999988776443
No 9
>KOG2647|consensus
Probab=88.12 E-value=1.6 Score=37.96 Aligned_cols=64 Identities=14% Similarity=0.197 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHHHHHHHHHHhh
Q psy10415 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGERCTLEDLYVC 127 (130)
Q Consensus 61 ~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~~f~l~~ll~~ 127 (130)
.+|+.+|+.++..+|.+.++..++...+..++++|...|.. +-+-++=+|.|-++|.+.|++..
T Consensus 130 ~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a~liFcfnPAs---IF~ts~YSEsLfa~~s~~Gi~~~ 193 (444)
T KOG2647|consen 130 LVNIFFFMLAAVALYQLTRIILHDPKISFYAALLFCFNPAS---IFLTAGYSESLFALFSFLGILFL 193 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhHHhhhhheeEecchH---hhhhHHhhHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999974 45667888999888888888754
No 10
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=87.51 E-value=6.4 Score=34.15 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=44.3
Q ss_pred HHHHHhcCCCCc-hHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccch
Q psy10415 46 RLNYLACGLKPR-SFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHT 102 (130)
Q Consensus 46 ~l~~~l~G~~p~-~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~ 102 (130)
+.-+.+||.+.+ .+++.|+++-.+...++|.+.+++.++ ..+..++.++++-|-.+
T Consensus 127 ~~l~kifg~~~~~~~~llNil~~~~si~liy~i~k~lf~~-~~a~~a~~l~~l~~~~~ 183 (483)
T TIGR03766 127 HFLYKLFGETSWLFFDVVNIVLVDLSALILYKAVKKVFNK-KKAFVALYLFVLLLALS 183 (483)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHHH
Confidence 335788897555 559999999999999999999999987 45677777777776543
No 11
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=81.33 E-value=7.2 Score=35.95 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=58.0
Q ss_pred CcchHHhHHHHHHHHhc------------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Q psy10415 36 SYRPLTVLTFRLNYLAC------------------GLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAV 97 (130)
Q Consensus 36 ~yRPL~~ls~~l~~~l~------------------G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~ 97 (130)
..-|+.-.-.++...+. |.++.+++..|.++-.++..++|..+|++..++.++.+++++++.
T Consensus 71 vHPPL~kml~al~~~L~g~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s~l~~~l~~llv~~ 150 (699)
T COG1928 71 VHPPLGKMLIALVGGLEGYDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYSRLVAALAGLLVAF 150 (699)
T ss_pred cCCcHHHHHHHhhhhhhccCCCcccccCCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHh
Confidence 34667666666655544 346779999999999999999999999999999999999999987
Q ss_pred cccchhhhhHHhhhhHHH
Q psy10415 98 HPIHTEAVSDYHKTYLIQ 115 (130)
Q Consensus 98 HPi~~EaV~~i~~R~~ll 115 (130)
--..+ ..+|-.++
T Consensus 151 dn~~~-----t~sR~ILL 163 (699)
T COG1928 151 DNSFV-----TESRFILL 163 (699)
T ss_pred ccchh-----hhhHHHHH
Confidence 54443 34565554
No 12
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=80.83 E-value=13 Score=28.37 Aligned_cols=67 Identities=19% Similarity=0.225 Sum_probs=50.0
Q ss_pred CCCCCcchHHhHHHHHHHHhcC-CCCchHHH--HHHHHHHHHHHHHHHHHHHhcch-------------hhHHHHHHHHH
Q psy10415 32 NSHGSYRPLTVLTFRLNYLACG-LKPRSFHL--INNLLHSAITYLVYILSSYVLPN-------------RRARLFASLIF 95 (130)
Q Consensus 32 ~s~~~yRPL~~ls~~l~~~l~G-~~p~~~h~--~NlllH~~~~~Lv~~l~~~l~~~-------------~~~a~laallF 95 (130)
..|....|+-++--++ ...+. ....+++. .+.+.=++.+.++|+.+.++.++ ...++++|+.|
T Consensus 14 V~HPPGyPlf~llg~l-f~~lp~~~~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~~a~lv~al~f 92 (178)
T PF11028_consen 14 VPHPPGYPLFTLLGRL-FSLLPDFGNIAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAILGAGLVGALAF 92 (178)
T ss_pred CCCCCCcHHHHHHHHH-HHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHH
Confidence 3578899999988888 77776 44556664 55667777888889999888877 46788888888
Q ss_pred Hhcc
Q psy10415 96 AVHP 99 (130)
Q Consensus 96 a~HP 99 (130)
+.-|
T Consensus 93 afS~ 96 (178)
T PF11028_consen 93 AFSD 96 (178)
T ss_pred HhhH
Confidence 7543
No 13
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=75.82 E-value=31 Score=27.66 Aligned_cols=76 Identities=21% Similarity=0.203 Sum_probs=48.6
Q ss_pred CCcchHHhHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHhcccchhhhhHHh
Q psy10415 35 GSYRPLTVLTFRLNYLACGL----KPRSFHLINNLLHSAITYLVYILSSYVLP-NRRARLFASLIFAVHPIHTEAVSDYH 109 (130)
Q Consensus 35 ~~yRPL~~ls~~l~~~l~G~----~p~~~h~~NlllH~~~~~Lv~~l~~~l~~-~~~~a~laallFa~HPi~~EaV~~i~ 109 (130)
++.||+..+...+- +|. .|+.-.+..+++=++.+.++ .+.+.. +...+.+.++++...|.-.|.-.|.-
T Consensus 27 ~~GR~~~~~~~~~l---~~~~~~~~~pl~~iLs~~~la~s~~~~---~~~~~~~~~~~~~l~~~~~~~~P~~~~~lsy~~ 100 (319)
T PF14264_consen 27 SSGRPLLDLLMKLL---FGTGNYDLPPLPQILSILFLALSAVLL---VRLFDIKSSFISVLFSLLFISSPFFLENLSYRF 100 (319)
T ss_pred hcCchHHHHHHHHH---hccCCCchhHHHHHHHHHHHHHHHHHH---HHHhCccchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46899998888665 332 24444444444444333333 444432 34678899999999999999988887
Q ss_pred hhhHHHH
Q psy10415 110 KTYLIQG 116 (130)
Q Consensus 110 ~R~~lla 116 (130)
+-.++.-
T Consensus 101 ~s~~~~l 107 (319)
T PF14264_consen 101 DSLPMAL 107 (319)
T ss_pred ccHHHHH
Confidence 7665543
No 14
>COG5305 Predicted membrane protein [Function unknown]
Probab=73.68 E-value=20 Score=32.28 Aligned_cols=84 Identities=20% Similarity=0.185 Sum_probs=65.3
Q ss_pred chHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHH
Q psy10415 38 RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGE 117 (130)
Q Consensus 38 RPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~ 117 (130)
-|+-++.-..=+++||.+-..-+-.+.++=++...++|.+.|.+.+. ..+.+++.++|.-|.++-. -.-.|+-.++.
T Consensus 98 ~PLYfll~h~W~~lF~~s~~~~Rsls~L~~~~ai~~~y~l~r~l~~~-~~a~la~~~~AisP~~i~~--~qe~R~y~L~~ 174 (552)
T COG5305 98 PPLYFLLAHFWMALFGNSLLASRSLSALLSALAIPLVYWLGRELFGS-TTALLAAALMAISPFHIFY--SQEARSYALAV 174 (552)
T ss_pred CCeeehHHHHHHHHhchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHccChHHHHH--HHHHHHHHHHH
Confidence 45444444455788897778889999999999999999999999886 4555999999999999865 45668877776
Q ss_pred HHHHHHH
Q psy10415 118 RCTLEDL 124 (130)
Q Consensus 118 ~f~l~~l 124 (130)
...+.+.
T Consensus 175 ~~~lis~ 181 (552)
T COG5305 175 ATTLISA 181 (552)
T ss_pred HHHHHHH
Confidence 6655543
No 15
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=70.98 E-value=18 Score=30.89 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=52.8
Q ss_pred cchHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhh
Q psy10415 37 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEA 104 (130)
Q Consensus 37 yRPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~Ea 104 (130)
+-|+-.+ +..-|++|+ +|..-=+...++=...+..+|+++|+...+...|++.++++++.|.-..+
T Consensus 42 fsPil~l-l~Ply~l~P-s~~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~ 107 (449)
T PF09852_consen 42 FSPILYL-LAPLYRLFP-SPLTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGA 107 (449)
T ss_pred chHHHHH-HHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhh
Confidence 4565544 345688886 88999999999999999999999999986778888888888887765544
No 16
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=63.17 E-value=46 Score=28.82 Aligned_cols=85 Identities=21% Similarity=0.202 Sum_probs=63.9
Q ss_pred chHHhHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHH
Q psy10415 38 RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGE 117 (130)
Q Consensus 38 RPL~~ls~~l~~~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~ 117 (130)
-||.---.++.-.+- +.|.-+++-+++.|.+.-+++++..+++.++...++++|++-+..|.--- ...+.--|+--+
T Consensus 137 PpLgKyIiAl~ml~~-d~Pl~WRiPsiIe~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~a--mg~VAMLDIhva 213 (438)
T COG4346 137 PPLGKYIIALGMLIV-DKPLYWRIPSIIEGALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRA--MGGVAMLDIHVA 213 (438)
T ss_pred CcHHHHHHHHHHHHh-cCCceeeccHHHhhhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHH--hcchhHHHHHHH
Confidence 467666666655554 89999999999999999999999999999988888899999888886421 233444455566
Q ss_pred HHHHHHHH
Q psy10415 118 RCTLEDLY 125 (130)
Q Consensus 118 ~f~l~~ll 125 (130)
+|.-+.++
T Consensus 214 FFtaL~~~ 221 (438)
T COG4346 214 FFTALFMY 221 (438)
T ss_pred HHHHHHHH
Confidence 66554443
No 17
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=60.89 E-value=72 Score=26.93 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=63.2
Q ss_pred cchHHhHHHHHHH---HhcCCCCchHHHHHHHHHHHHHHHHHHHHHHhcch-----------hhHHHHHHHHHHhcccch
Q psy10415 37 YRPLTVLTFRLNY---LACGLKPRSFHLINNLLHSAITYLVYILSSYVLPN-----------RRARLFASLIFAVHPIHT 102 (130)
Q Consensus 37 yRPL~~ls~~l~~---~l~G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~-----------~~~a~laallFa~HPi~~ 102 (130)
+-|+-...+..-. .-.-.++....+.-.+.-++.+.+++.+.+...+. ...+.+.+.++..+|...
T Consensus 58 ~~PLlL~l~~~l~~~~~~~~~~~~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~~~~~lv~~~YLfNP~tI 137 (382)
T PF06728_consen 58 QPPLLLALFSFLLKSSPNSPNSPILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKSSSPWLVAAFYLFNPLTI 137 (382)
T ss_pred CcCHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcccchHHHHHHHHHCHHHH
Confidence 3566555543221 11124677888888888899999999988665432 157889999999999988
Q ss_pred hhhhHHhhhhHHHHHHHHHHHHHhh
Q psy10415 103 EAVSDYHKTYLIQGERCTLEDLYVC 127 (130)
Q Consensus 103 EaV~~i~~R~~lla~~f~l~~ll~~ 127 (130)
= +.+++-.+....++...+++.+
T Consensus 138 l--scva~ST~~f~nl~i~~sl~~a 160 (382)
T PF06728_consen 138 L--SCVALSTTVFTNLFILLSLYFA 160 (382)
T ss_pred H--HHHhcccHHHHHHHHHHHHHHH
Confidence 4 5777778888888777777664
No 18
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=50.21 E-value=1.4e+02 Score=26.38 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=38.5
Q ss_pred CCCcchHHhHHHHHHHHhcCCCCc----hHHHHHHHHHHHHHHHHHHHHHHhcch
Q psy10415 34 HGSYRPLTVLTFRLNYLACGLKPR----SFHLINNLLHSAITYLVYILSSYVLPN 84 (130)
Q Consensus 34 ~~~yRPL~~ls~~l~~~l~G~~p~----~~h~~NlllH~~~~~Lv~~l~~~l~~~ 84 (130)
...|-|+...-+..--.+.|.|+. .+++..++==++..+.+-+++|+...+
T Consensus 140 ~aPYGPl~l~i~~~v~~l~g~~i~~~v~~~Rl~~l~g~~l~~w~~~rLar~~g~~ 194 (470)
T TIGR03459 140 TTPYGPLHLLVGQAITTVTGDNVTAGTLAFKLLSLPGLAVMVWAVPKLATHLGGN 194 (470)
T ss_pred CCCCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999998876 477777766666666666666666544
No 19
>PF14063 DUF4254: Protein of unknown function (DUF4254)
Probab=41.80 E-value=18 Score=26.88 Aligned_cols=19 Identities=16% Similarity=-0.050 Sum_probs=17.2
Q ss_pred ccchhhhhHHhhhhHHHHH
Q psy10415 99 PIHTEAVSDYHKTYLIQGE 117 (130)
Q Consensus 99 Pi~~EaV~~i~~R~~lla~ 117 (130)
|+|+|+.+|++.|...++.
T Consensus 71 ~lnTEt~g~~iDRLsil~l 89 (145)
T PF14063_consen 71 RLNTETPGWAIDRLSILNL 89 (145)
T ss_pred ccccCCHHHHHHHHHHHHH
Confidence 6899999999999998874
No 20
>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=39.22 E-value=2e+02 Score=25.87 Aligned_cols=88 Identities=15% Similarity=0.175 Sum_probs=46.5
Q ss_pred CCcchHHh--HHHHHHHHhc---CCCCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHh
Q psy10415 35 GSYRPLTV--LTFRLNYLAC---GLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYH 109 (130)
Q Consensus 35 ~~yRPL~~--ls~~l~~~l~---G~~p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~ 109 (130)
-+|||.-- +-+..|+.+| |.+-+--+++=.+.-.+..+..|+.-++|.+ .-.+..+.+-+..|+-+.=-- -
T Consensus 58 w~YrPi~HGPfL~hvn~avF~~lGasDataRlvvAv~G~llpL~awL~R~rL~d--~evlal~~LLA~sPvlVYYSR--F 133 (556)
T COG4745 58 WSYRPIYHGPFLYHVNYAVFGLLGASDATARLVVAVTGVLLPLTAWLYRTRLGD--KEVLALATLLAFSPVLVYYSR--F 133 (556)
T ss_pred ceecccccCchhhhhhhhhhhhcccchhhhhhhHHHhhhHHHHHHHHHHHhccc--hHHHHHHHHHhcChhhhhHHH--H
Confidence 35777632 3444555554 3344444444443333333333333333333 334445566677786543211 3
Q ss_pred hhhHHHHHHHHHHHHHh
Q psy10415 110 KTYLIQGERCTLEDLYV 126 (130)
Q Consensus 110 ~R~~lla~~f~l~~ll~ 126 (130)
-|+|++-+.|++++.-.
T Consensus 134 mR~Dl~la~ftl~aVg~ 150 (556)
T COG4745 134 MRNDLLLAAFTLLAVGF 150 (556)
T ss_pred HhhhHHHHHHHHHHHHH
Confidence 59999999999887643
No 21
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=35.34 E-value=36 Score=28.72 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhcccchhhhhHHhhhhHHHHHHHHHH
Q psy10415 65 LLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGERCTLE 122 (130)
Q Consensus 65 llH~~~~~Lv~~l~~~l~~~~~~a~laallFa~HPi~~EaV~~i~~R~~lla~~f~l~ 122 (130)
++-.+.+..+|.+.|++.+ +..++++|++.++-|.+.+=..-=.-..|.+..+|.+.
T Consensus 103 vl~~L~vi~~y~~~~~~~~-~~~Gl~aA~l~a~~p~~l~RT~~G~~D~~~~~~~f~~l 159 (483)
T PF02516_consen 103 VLGALTVIPVYLLGRRLGG-RKAGLLAAFLLAISPGYLSRTMAGFYDHHMLELFFPLL 159 (483)
T ss_dssp HHGGGGHHHHHHHHHHTT--HHHHHHHHHHHTTSHHHHHTSSTT--SGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCC-CchHHHHHHHHHHhHHHHHHhcCCCcccchHHHHHHHH
Confidence 3445667788888866654 58999999999999986553222222444444444433
No 22
>KOG3359|consensus
Probab=28.38 E-value=1.6e+02 Score=27.61 Aligned_cols=65 Identities=22% Similarity=0.181 Sum_probs=54.5
Q ss_pred CCcchHHhHHHHHHHHhcCCC-----------------CchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Q psy10415 35 GSYRPLTVLTFRLNYLACGLK-----------------PRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAV 97 (130)
Q Consensus 35 ~~yRPL~~ls~~l~~~l~G~~-----------------p~~~h~~NlllH~~~~~Lv~~l~~~l~~~~~~a~laallFa~ 97 (130)
...-|+.-.-+++--.+.|.+ -.+++..|..+-.++.-++|..++.+..++.+|.++|++++.
T Consensus 81 DvHPPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~y~t~~~~~~s~~aa~l~allv~~ 160 (723)
T KOG3359|consen 81 DVHPPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVPLAYLTLKELGFSRLAAALAALLVLF 160 (723)
T ss_pred ccCchHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHHHHHHHHHHhcccHHHHHHHHHHHhh
Confidence 345789888888877776642 348899999999999999999999999999999999999987
Q ss_pred cc
Q psy10415 98 HP 99 (130)
Q Consensus 98 HP 99 (130)
-=
T Consensus 161 dn 162 (723)
T KOG3359|consen 161 DN 162 (723)
T ss_pred cc
Confidence 53
No 23
>PF11278 DUF3079: Protein of unknown function (DUF3079); InterPro: IPR021430 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=24.37 E-value=16 Score=22.70 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=14.2
Q ss_pred HHhcccchhhhhHHhhh
Q psy10415 95 FAVHPIHTEAVSDYHKT 111 (130)
Q Consensus 95 Fa~HPi~~EaV~~i~~R 111 (130)
|-+||.|-|-+.|=..|
T Consensus 5 FPlhP~hPERiCWGCD~ 21 (52)
T PF11278_consen 5 FPLHPKHPERICWGCDR 21 (52)
T ss_pred CCCCCCCccceeecccc
Confidence 67899999999997655
No 24
>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is typically between 667 to 694 amino acids in length.
Probab=24.24 E-value=5e+02 Score=24.24 Aligned_cols=77 Identities=17% Similarity=0.096 Sum_probs=52.8
Q ss_pred CCCcchHHhHHHHHHHHhcCCCCchH-HHHHHHHHHHHHHHHHHHHHHhc-chhhHHHHHHHHHHhcccchhhhhHHhhh
Q psy10415 34 HGSYRPLTVLTFRLNYLACGLKPRSF-HLINNLLHSAITYLVYILSSYVL-PNRRARLFASLIFAVHPIHTEAVSDYHKT 111 (130)
Q Consensus 34 ~~~yRPL~~ls~~l~~~l~G~~p~~~-h~~NlllH~~~~~Lv~~l~~~l~-~~~~~a~laallFa~HPi~~EaV~~i~~R 111 (130)
.+|.=|. -.|.+--...|..+|.. ++==-++-.+..+-++++++++. +.....+++|+.|++-|--.+.+..|+.-
T Consensus 52 yGYLFP~--G~Ff~l~~~lglP~Wi~QRLWwallL~vaf~G~~rLa~~L~igs~~~r~~Aa~~YaLsPr~Lttlg~iSse 129 (680)
T PF11847_consen 52 YGYLFPM--GPFFALGDLLGLPDWITQRLWWALLLTVAFWGALRLARALGIGSPASRVLAAVAYALSPRVLTTLGAISSE 129 (680)
T ss_pred eeeeccc--hHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 3444454 44544455567777754 55555555666667777888883 44568899999999999999888888654
Q ss_pred h
Q psy10415 112 Y 112 (130)
Q Consensus 112 ~ 112 (130)
.
T Consensus 130 ~ 130 (680)
T PF11847_consen 130 T 130 (680)
T ss_pred H
Confidence 3
No 25
>PRK14471 F0F1 ATP synthase subunit B; Provisional
Probab=21.52 E-value=1.7e+02 Score=21.37 Aligned_cols=28 Identities=4% Similarity=-0.039 Sum_probs=18.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10415 55 KPRSFHLINNLLHSAITYLVYILSSYVL 82 (130)
Q Consensus 55 ~p~~~h~~NlllH~~~~~Lv~~l~~~l~ 82 (130)
||...+...+++.++|-+++++++.+++
T Consensus 2 ~~l~~~~~~~~~~~i~Flil~~ll~~~l 29 (164)
T PRK14471 2 DLLTPDFGLFFWQTILFLILLLLLAKFA 29 (164)
T ss_pred CcccCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445677888888777777776654
Done!