Query psy10415
Match_columns 130
No_of_seqs 127 out of 430
Neff 6.0
Searched_HMMs 13730
Date Fri Aug 16 17:20:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10415.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10415hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vk5a_ a.220.1.1 (A:) Hypothe 9.8 36 0.0026 21.9 0.4 16 97-112 76-91 (121)
2 d1xqoa_ a.96.1.6 (A:) 8-oxogua 8.8 46 0.0033 24.1 0.8 19 95-113 209-227 (253)
3 d1z63a1 c.37.1.19 (A:432-661) 7.4 58 0.0042 21.6 0.8 17 97-113 13-29 (230)
4 d1sgja_ c.1.12.5 (A:) Citrate 6.6 32 0.0023 23.8 -1.1 12 95-106 216-227 (231)
5 d1tr0a_ d.58.4.4 (A:) Boiling 5.7 90 0.0066 18.4 0.9 15 95-109 78-92 (106)
6 d2axtt1 f.23.34.1 (T:1-30) Pho 5.4 1.9E+02 0.014 13.6 2.4 15 103-117 2-16 (30)
7 d2j8cl1 f.26.1.1 (L:1-281) L ( 5.4 1.2E+02 0.0084 22.2 1.5 18 91-108 183-200 (281)
8 d1rjja_ d.58.4.4 (A:) Hypothet 4.9 97 0.0071 18.5 0.7 14 95-108 73-86 (111)
9 d2j8cm1 f.26.1.1 (M:1-303) M ( 4.7 2.5E+02 0.018 20.5 3.0 19 90-108 211-229 (303)
10 d1x0ha1 d.332.1.1 (A:8-107) Ra 4.6 1.6E+02 0.012 17.9 1.6 9 62-70 85-93 (100)
No 1
>d1vk5a_ a.220.1.1 (A:) Hypothetical protein At3g22680 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=9.76 E-value=36 Score=21.85 Aligned_cols=16 Identities=25% Similarity=0.308 Sum_probs=13.3
Q ss_pred hcccchhhhhHHhhhh
Q psy10415 97 VHPIHTEAVSDYHKTY 112 (130)
Q Consensus 97 ~HPi~~EaV~~i~~R~ 112 (130)
+||...||.-|+++--
T Consensus 76 IhP~kAeatIW~vEe~ 91 (121)
T d1vk5a_ 76 IHPTKAEATIWLVEEI 91 (121)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHH
Confidence 7999999999997643
No 2
>d1xqoa_ a.96.1.6 (A:) 8-oxoguanine DNA glycosylase, AgoG {Pyrobaculum aerophilum [TaxId: 13773]}
Probab=8.84 E-value=46 Score=24.11 Aligned_cols=19 Identities=11% Similarity=0.190 Sum_probs=16.7
Q ss_pred HHhcccchhhhhHHhhhhH
Q psy10415 95 FAVHPIHTEAVSDYHKTYL 113 (130)
Q Consensus 95 Fa~HPi~~EaV~~i~~R~~ 113 (130)
..+=|+|..|+.|+.||.-
T Consensus 209 ~~IPpLHLDSilWl~g~~~ 227 (253)
T d1xqoa_ 209 TGIPPLHLDTLLWLAGRAV 227 (253)
T ss_dssp HTCCHHHHHHHHHHHHHHH
T ss_pred cCCCchhhhHHHHhccccc
Confidence 3689999999999999964
No 3
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=7.44 E-value=58 Score=21.57 Aligned_cols=17 Identities=12% Similarity=0.036 Sum_probs=14.4
Q ss_pred hcccchhhhhHHhhhhH
Q psy10415 97 VHPIHTEAVSDYHKTYL 113 (130)
Q Consensus 97 ~HPi~~EaV~~i~~R~~ 113 (130)
++|-|.|+|.|+.+|..
T Consensus 13 L~~yQ~~~v~~~~~~~~ 29 (230)
T d1z63a1 13 LRPYQIKGFSWMRFMNK 29 (230)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhh
Confidence 57999999999987765
No 4
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]}
Probab=6.56 E-value=32 Score=23.76 Aligned_cols=12 Identities=17% Similarity=0.509 Sum_probs=9.8
Q ss_pred HHhcccchhhhh
Q psy10415 95 FAVHPIHTEAVS 106 (130)
Q Consensus 95 Fa~HPi~~EaV~ 106 (130)
+++||-|+|.|.
T Consensus 216 ~~IHP~Qi~~in 227 (231)
T d1sgja_ 216 LCIHPAQVALAH 227 (231)
T ss_dssp EESSHHHHHHHH
T ss_pred eecCHhHHHHHH
Confidence 578999999874
No 5
>d1tr0a_ d.58.4.4 (A:) Boiling stable protein 1 {European aspen (Populus tremula) [TaxId: 113636]}
Probab=5.69 E-value=90 Score=18.35 Aligned_cols=15 Identities=0% Similarity=0.009 Sum_probs=11.1
Q ss_pred HHhcccchhhhhHHh
Q psy10415 95 FAVHPIHTEAVSDYH 109 (130)
Q Consensus 95 Fa~HPi~~EaV~~i~ 109 (130)
+..||.|.|.+..+.
T Consensus 78 Y~~hP~H~~~~~~~~ 92 (106)
T d1tr0a_ 78 YLDSAALAAFAEGFL 92 (106)
T ss_dssp HHTCHHHHHHHHHHG
T ss_pred HhCCHhHHHHHHHHH
Confidence 677899888776553
No 6
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.39 E-value=1.9e+02 Score=13.58 Aligned_cols=15 Identities=13% Similarity=-0.073 Sum_probs=6.3
Q ss_pred hhhhHHhhhhHHHHH
Q psy10415 103 EAVSDYHKTYLIQGE 117 (130)
Q Consensus 103 EaV~~i~~R~~lla~ 117 (130)
|+++|+---..+.+.
T Consensus 2 e~i~yv~ifac~i~l 16 (30)
T d2axtt1 2 ETITYVFIFACIIAL 16 (30)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ceeehHHHHHHHHHH
Confidence 455555333333333
No 7
>d2j8cl1 f.26.1.1 (L:1-281) L (light) subunit {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=5.37 E-value=1.2e+02 Score=22.16 Aligned_cols=18 Identities=17% Similarity=0.196 Sum_probs=12.9
Q ss_pred HHHHHHhcccchhhhhHH
Q psy10415 91 ASLIFAVHPIHTEAVSDY 108 (130)
Q Consensus 91 aallFa~HPi~~EaV~~i 108 (130)
++++||+|-..+++|+.-
T Consensus 183 saLl~AmHGatIla~~~~ 200 (281)
T d2j8cl1 183 NALALALHGALVLSAANP 200 (281)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhhhhhheeeccC
Confidence 677777777777777653
No 8
>d1rjja_ d.58.4.4 (A:) Hypothetical protein AT5G22580 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=4.94 E-value=97 Score=18.53 Aligned_cols=14 Identities=36% Similarity=0.838 Sum_probs=10.3
Q ss_pred HHhcccchhhhhHH
Q psy10415 95 FAVHPIHTEAVSDY 108 (130)
Q Consensus 95 Fa~HPi~~EaV~~i 108 (130)
+..||.|.|.+..+
T Consensus 73 Y~~hP~H~~~~~~~ 86 (111)
T d1rjja_ 73 FTSHPLHVEFSAAF 86 (111)
T ss_dssp HHTSHHHHHHHHHH
T ss_pred HhCCHhHHHHHHHH
Confidence 66888888876654
No 9
>d2j8cm1 f.26.1.1 (M:1-303) M (medium) subunit {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=4.66 E-value=2.5e+02 Score=20.46 Aligned_cols=19 Identities=37% Similarity=0.483 Sum_probs=15.8
Q ss_pred HHHHHHHhcccchhhhhHH
Q psy10415 90 FASLIFAVHPIHTEAVSDY 108 (130)
Q Consensus 90 laallFa~HPi~~EaV~~i 108 (130)
-++++||+|-..+.+|..-
T Consensus 211 gsaLl~AmHGatIla~~~~ 229 (303)
T d2j8cm1 211 GSALLFAMHGATILAVSRF 229 (303)
T ss_dssp HHHHHHHHHHHHHHHTGGG
T ss_pred HhHHHHHhhhhHhhhhhcc
Confidence 3789999999999988873
No 10
>d1x0ha1 d.332.1.1 (A:8-107) Ras GTPase-activating-like protein IQGAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.59 E-value=1.6e+02 Score=17.88 Aligned_cols=9 Identities=22% Similarity=0.168 Sum_probs=5.6
Q ss_pred HHHHHHHHH
Q psy10415 62 INNLLHSAI 70 (130)
Q Consensus 62 ~NlllH~~~ 70 (130)
+|.++|++|
T Consensus 85 vn~ll~Lin 93 (100)
T d1x0ha1 85 VNLLIFLLN 93 (100)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566666655
Done!