Your job contains 1 sequence.
>psy10415
RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH
LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVSDYHKTYLIQGERCT
LEDLYVCLFV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10415
(130 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2QUG9 - symbol:TMTC3 "Uncharacterized protein"... 297 2.1e-26 2
UNIPROTKB|Q6ZXV5 - symbol:TMTC3 "Transmembrane and TPR re... 294 2.2e-26 2
MGI|MGI:3036255 - symbol:Tmtc3 "transmembrane and tetratr... 296 2.2e-26 2
RGD|1306351 - symbol:Tmtc3 "transmembrane and tetratricop... 294 4.5e-26 2
UNIPROTKB|F8W044 - symbol:TMTC3 "Transmembrane and TPR re... 294 5.2e-26 1
FB|FBgn0051690 - symbol:CG31690 species:7227 "Drosophila ... 303 7.7e-26 1
UNIPROTKB|E1BG63 - symbol:TMTC3 "Uncharacterized protein"... 290 1.2e-25 2
UNIPROTKB|F1SPX9 - symbol:TMTC3 "Uncharacterized protein"... 296 2.4e-25 1
UNIPROTKB|E1C3P5 - symbol:TMTC3 "Uncharacterized protein"... 270 2.1e-23 2
FB|FBgn0028481 - symbol:CG4341 species:7227 "Drosophila m... 279 3.4e-23 1
UNIPROTKB|Q5T4D3 - symbol:TMTC4 "Transmembrane and TPR re... 268 3.3e-22 1
UNIPROTKB|F1MG00 - symbol:TMTC2 "Uncharacterized protein"... 259 2.3e-21 1
UNIPROTKB|Q8N394 - symbol:TMTC2 "Transmembrane and TPR re... 260 3.0e-21 1
RGD|1309848 - symbol:Tmtc2 "transmembrane and tetratricop... 258 3.2e-21 1
MGI|MGI:1914057 - symbol:Tmtc2 "transmembrane and tetratr... 258 4.9e-21 1
MGI|MGI:1921050 - symbol:Tmtc4 "transmembrane and tetratr... 256 6.5e-21 1
UNIPROTKB|F1NNA8 - symbol:Gga.1615 "Uncharacterized prote... 257 7.7e-21 1
UNIPROTKB|F1PW92 - symbol:TMTC2 "Uncharacterized protein"... 256 8.0e-21 1
UNIPROTKB|F1NPM4 - symbol:TMTC2 "Uncharacterized protein"... 250 3.4e-20 1
MGI|MGI:3039590 - symbol:Tmtc1 "transmembrane and tetratr... 249 5.5e-20 1
FB|FBgn0020312 - symbol:CG4050 species:7227 "Drosophila m... 200 8.1e-20 2
UNIPROTKB|Q8IUR5 - symbol:TMTC1 "Transmembrane and TPR re... 247 8.1e-20 1
UNIPROTKB|F1N5E9 - symbol:TMTC1 "Uncharacterized protein"... 245 1.5e-19 1
WB|WBGene00018175 - symbol:F38B6.6 species:6239 "Caenorha... 215 1.5e-16 1
RGD|1564868 - symbol:Tmtc1 "transmembrane and tetratricop... 202 5.5e-15 1
WB|WBGene00017983 - symbol:F32D1.3 species:6239 "Caenorha... 201 5.6e-15 1
FB|FBgn0038324 - symbol:CG5038 species:7227 "Drosophila m... 192 4.4e-14 1
UNIPROTKB|Q74A82 - symbol:GSU2508 "TPR domain protein" sp... 134 5.0e-08 1
TIGR_CMR|GSU_2508 - symbol:GSU_2508 "TPR domain protein" ... 134 5.0e-08 1
UNIPROTKB|Q74D21 - symbol:xapA "Membrane protein, putativ... 113 1.0e-05 1
TIGR_CMR|GSU_1498 - symbol:GSU_1498 "membrane protein, pu... 113 1.0e-05 1
>UNIPROTKB|E2QUG9 [details] [associations]
symbol:TMTC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060447 "bud outgrowth involved in lung
branching" evidence=IEA] [GO:0048747 "muscle fiber development"
evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
[GO:0010468 "regulation of gene expression" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF13174 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:EAEMWMK CTD:160418 EMBL:AAEX03009910 RefSeq:XP_532644.1
ProteinModelPortal:E2QUG9 Ensembl:ENSCAFT00000009836 GeneID:475421
KEGG:cfa:475421 Uniprot:E2QUG9
Length = 915
Score = 297 (109.6 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 57/105 (54%), Positives = 74/105 (70%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL LKP S+HL
Sbjct: 35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 94
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ + + L NR + + ASL+FAVHPIHTEAV+
Sbjct: 95 LNMIFHAVVSVIFLKVCKLFLDNRSS-MIASLLFAVHPIHTEAVT 138
Score = 38 (18.4 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 101 HTEAVSDYHKTYLIQGERCTLEDL 124
H V + + L++ ERC +E L
Sbjct: 775 HNLCVVYFEEKDLLKAERCLVETL 798
>UNIPROTKB|Q6ZXV5 [details] [associations]
symbol:TMTC3 "Transmembrane and TPR repeat-containing
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
[GO:0048747 "muscle fiber development" evidence=IEA] [GO:0060447
"bud outgrowth involved in lung branching" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13174 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 HSSP:P50542 InterPro:IPR013618
Pfam:PF08409 OMA:EAEMWMK EMBL:AJ697717 EMBL:BX538169 EMBL:CR749244
EMBL:CR749309 EMBL:CR933632 EMBL:CR936640 EMBL:BC117175
EMBL:BC117177 EMBL:AK074973 IPI:IPI00470924 IPI:IPI00829865
RefSeq:NP_861448.2 UniGene:Hs.331268 ProteinModelPortal:Q6ZXV5
SMR:Q6ZXV5 STRING:Q6ZXV5 DMDM:134035047 PaxDb:Q6ZXV5 PRIDE:Q6ZXV5
DNASU:160418 Ensembl:ENST00000266712 GeneID:160418 KEGG:hsa:160418
UCSC:uc001tau.3 CTD:160418 GeneCards:GC12P088536 HGNC:HGNC:26899
HPA:HPA038550 neXtProt:NX_Q6ZXV5 PharmGKB:PA142670720
HOVERGEN:HBG094080 InParanoid:Q6ZXV5 OrthoDB:EOG441Q9R
ChiTaRS:TMTC3 GenomeRNAi:160418 NextBio:87960 ArrayExpress:Q6ZXV5
Bgee:Q6ZXV5 CleanEx:HS_TMTC3 Genevestigator:Q6ZXV5 Uniprot:Q6ZXV5
Length = 915
Score = 294 (108.6 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 56/105 (53%), Positives = 74/105 (70%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL LKP S+HL
Sbjct: 35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ + + L N+ + + ASL+FAVHPIHTEAV+
Sbjct: 95 LNMIFHAVVSVIFLKVCKLFLDNKSS-VIASLLFAVHPIHTEAVT 138
Score = 41 (19.5 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 101 HTEAVSDYHKTYLIQGERCTLEDL 124
H V + + L++ ERC LE L
Sbjct: 776 HNLCVVYFEEKDLLKAERCLLETL 799
>MGI|MGI:3036255 [details] [associations]
symbol:Tmtc3 "transmembrane and tetratricopeptide repeat
containing 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0009791 "post-embryonic development" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0048286 "lung alveolus development" evidence=IMP] [GO:0048747
"muscle fiber development" evidence=IMP] [GO:0060447 "bud outgrowth
involved in lung branching" evidence=IMP] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 MGI:MGI:3036255 GO:GO:0016021
GO:GO:0009791 eggNOG:COG0457 GO:GO:0048286 GO:GO:0048747
Gene3D:1.25.40.10 GO:GO:0010468 EMBL:AC153501 GO:GO:0060447
GeneTree:ENSGT00550000074327 HOGENOM:HOG000007190
InterPro:IPR013618 Pfam:PF08409 CTD:160418 HOVERGEN:HBG094080
OrthoDB:EOG441Q9R EMBL:AK044857 EMBL:AK165838 IPI:IPI00224237
IPI:IPI00762305 RefSeq:NP_001028504.1 RefSeq:NP_001103483.1
UniGene:Mm.296805 ProteinModelPortal:Q8BRH0 SMR:Q8BRH0
PhosphoSite:Q8BRH0 PaxDb:Q8BRH0 PRIDE:Q8BRH0 DNASU:237500
Ensembl:ENSMUST00000099318 GeneID:237500 KEGG:mmu:237500
UCSC:uc007gxt.2 UCSC:uc007gxu.1 InParanoid:Q8BRH0 NextBio:383386
Bgee:Q8BRH0 Genevestigator:Q8BRH0 Uniprot:Q8BRH0
Length = 920
Score = 296 (109.3 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 54/105 (51%), Positives = 77/105 (73%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL LKP S+HL
Sbjct: 40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ ++++ + ++R+ + A+L+FAVHPIHTEAV+
Sbjct: 100 LNTVFHAVVS-VIFLKVCRLFLDKRSSMIAALLFAVHPIHTEAVT 143
Score = 39 (18.8 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 101 HTEAVSDYHKTYLIQGERCTLEDL 124
H V + + L++ ERC +E L
Sbjct: 780 HNLCVVYFEEKELLKAERCLVETL 803
>RGD|1306351 [details] [associations]
symbol:Tmtc3 "transmembrane and tetratricopeptide repeat
containing 3" species:10116 "Rattus norvegicus" [GO:0009791
"post-embryonic development" evidence=IEA;ISO] [GO:0010468
"regulation of gene expression" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030324 "lung development"
evidence=ISO] [GO:0048286 "lung alveolus development"
evidence=IEA;ISO] [GO:0048747 "muscle fiber development"
evidence=IEA;ISO] [GO:0060447 "bud outgrowth involved in lung
branching" evidence=IEA;ISO] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 RGD:1306351 GO:GO:0016021 Gene3D:1.25.40.10
EMBL:CH473960 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 CTD:160418 OrthoDB:EOG441Q9R IPI:IPI00914737
RefSeq:NP_001129330.1 UniGene:Rn.3901 Ensembl:ENSRNOT00000029045
GeneID:314785 KEGG:rno:314785 UCSC:RGD:1306351 NextBio:668214
Uniprot:D3ZUJ8
Length = 920
Score = 294 (108.6 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 54/105 (51%), Positives = 76/105 (72%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL LKP S+HL
Sbjct: 40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ ++++ + ++R + A+L+FAVHPIHTEAV+
Sbjct: 100 LNTVFHAVVS-VIFLKVCRLFLDKRGSVIAALLFAVHPIHTEAVT 143
Score = 38 (18.4 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 101 HTEAVSDYHKTYLIQGERCTLEDL 124
H V + + L++ ERC +E L
Sbjct: 780 HNLCVVYFEEKDLLKAERCLVETL 803
>UNIPROTKB|F8W044 [details] [associations]
symbol:TMTC3 "Transmembrane and TPR repeat-containing
protein 3" species:9606 "Homo sapiens" [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=IEA] [GO:0048286 "lung alveolus development"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IEA]
[GO:0060447 "bud outgrowth involved in lung branching"
evidence=IEA] EMBL:AC091516 HGNC:HGNC:26899 ChiTaRS:TMTC3
EMBL:AC087865 EMBL:AC127901 IPI:IPI01021462 Ensembl:ENST00000549011
ArrayExpress:F8W044 Bgee:F8W044 Uniprot:F8W044
Length = 148
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 56/105 (53%), Positives = 74/105 (70%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL LKP S+HL
Sbjct: 35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ + + L N+ + + ASL+FAVHPIHTEAV+
Sbjct: 95 LNMIFHAVVSVIFLKVCKLFLDNKSS-VIASLLFAVHPIHTEAVT 138
>FB|FBgn0051690 [details] [associations]
symbol:CG31690 species:7227 "Drosophila melanogaster"
[GO:0016262 "protein N-acetylglucosaminyltransferase activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0016021 EMBL:AE014134 eggNOG:COG0457 Gene3D:1.25.40.10
HSSP:O15294 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 EMBL:BT120303 EMBL:AY089484 RefSeq:NP_722826.1
RefSeq:NP_995615.2 UniGene:Dm.4985 ProteinModelPortal:Q9VQE9
SMR:Q9VQE9 EnsemblMetazoa:FBtr0301682 GeneID:33455
KEGG:dme:Dmel_CG31690 UCSC:CG31690-RA FlyBase:FBgn0051690
InParanoid:Q9VQE9 OMA:STTDHRP OrthoDB:EOG4QV9SX PhylomeDB:Q9VQE9
GenomeRNAi:33455 NextBio:783662 Bgee:Q9VQE9 Uniprot:Q9VQE9
Length = 859
Score = 303 (111.7 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 56/106 (52%), Positives = 75/106 (70%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAIL N DV P+ +L ND+WGTP+ SHGS+RPL VL+FRLNYLA G+ P +H
Sbjct: 48 RAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGMTPLGYH 107
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N +LH T+LV++++ +LP+R L A +FAVHP HTEAV+
Sbjct: 108 LVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVA 153
>UNIPROTKB|E1BG63 [details] [associations]
symbol:TMTC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060447 "bud outgrowth involved in lung branching"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0010468
"regulation of gene expression" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13174 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:EAEMWMK EMBL:DAAA02012652 EMBL:DAAA02012653 IPI:IPI00703757
Ensembl:ENSBTAT00000011881 Uniprot:E1BG63
Length = 920
Score = 290 (107.1 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 54/105 (51%), Positives = 75/105 (71%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL L P S+HL
Sbjct: 40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELTPMSYHL 99
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ ++++ + N ++ + ASL+FAVHPIHTEAV+
Sbjct: 100 LNMIFHAVVS-VIFLKVCRLFLNNQSSMIASLLFAVHPIHTEAVT 143
Score = 38 (18.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 101 HTEAVSDYHKTYLIQGERCTLEDL 124
H V + + L++ ERC +E L
Sbjct: 780 HNLCVVYFEEKDLLKAERCLVETL 803
>UNIPROTKB|F1SPX9 [details] [associations]
symbol:TMTC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060447 "bud outgrowth involved in lung branching"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0010468
"regulation of gene expression" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:EAEMWMK EMBL:CU468671 EMBL:CU927911 Ensembl:ENSSSCT00000001012
Uniprot:F1SPX9
Length = 650
Score = 296 (109.3 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 57/105 (54%), Positives = 74/105 (70%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ LF ND+WGTP++ SH SYRPLTVLTFRLNYL LKP S+HL
Sbjct: 40 AILDNKDLHPTTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 99
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H+ ++ + + L NR + + ASL+FAVHPIHTEAV+
Sbjct: 100 LNMMFHAVVSVIFLKVCKLFLDNRSS-MIASLLFAVHPIHTEAVT 143
>UNIPROTKB|E1C3P5 [details] [associations]
symbol:TMTC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009791 "post-embryonic development" evidence=IEA]
[GO:0010468 "regulation of gene expression" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0048747
"muscle fiber development" evidence=IEA] [GO:0060447 "bud outgrowth
involved in lung branching" evidence=IEA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:EAEMWMK EMBL:AADN02009651 EMBL:AADN02009652 EMBL:AADN02009653
IPI:IPI00597036 Ensembl:ENSGALT00000018257 Uniprot:E1C3P5
Length = 921
Score = 270 (100.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 53/105 (50%), Positives = 70/105 (66%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AIL N D+ TP+ +LF ND+WGTP++ SH SYRPLTVLTFRLNYL L S+H
Sbjct: 35 AILDNKDLHPSTPLKNLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELNAVSYHF 94
Query: 62 INNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N + H + + + L N+ + + ASL+FAVHPIHTEAV+
Sbjct: 95 LNLIFHGVVCVVFLKVCKLFLDNQSS-IVASLLFAVHPIHTEAVT 138
Score = 37 (18.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 101 HTEAVSDYHKTYLIQGERCTLEDL 124
H V + + LI+ E+C +E L
Sbjct: 778 HNLCVVYFEERDLIKAEKCLVETL 801
>FB|FBgn0028481 [details] [associations]
symbol:CG4341 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13174
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 GO:GO:0016021
EMBL:AE014134 eggNOG:COG0457 Gene3D:1.25.40.10 HSSP:O15294
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OrthoDB:EOG4QV9SX EMBL:AF181645 RefSeq:NP_608558.1 UniGene:Dm.3015
ProteinModelPortal:Q9V3X5 SMR:Q9V3X5 MINT:MINT-1331066 PRIDE:Q9V3X5
EnsemblMetazoa:FBtr0077949 GeneID:33276 KEGG:dme:Dmel_CG4341
UCSC:CG4341-RA FlyBase:FBgn0028481 InParanoid:Q9V3X5 OMA:HMRWRES
PhylomeDB:Q9V3X5 GenomeRNAi:33276 NextBio:782809 Bgee:Q9V3X5
Uniprot:Q9V3X5
Length = 938
Score = 279 (103.3 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 59/107 (55%), Positives = 71/107 (66%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYL-ACGLKPRSF 59
RAIL N DV TP F+ND+WGTP+T SHGS+RPL VL+FRLNYL G P F
Sbjct: 60 RAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNYLIGGGFAPWGF 119
Query: 60 HLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
HL+NNLLH T LV ++ +L + A L A +FA HPIHTEAV+
Sbjct: 120 HLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVA 166
>UNIPROTKB|Q5T4D3 [details] [associations]
symbol:TMTC4 "Transmembrane and TPR repeat-containing
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10 HSSP:O15294
OMA:GYCMLLT InterPro:IPR013618 Pfam:PF08409 HOVERGEN:HBG106148
EMBL:AK056409 EMBL:AK027530 EMBL:BX647956 EMBL:AL359085
EMBL:BC018707 IPI:IPI00514153 IPI:IPI00646732 IPI:IPI00953037
RefSeq:NP_001073137.1 RefSeq:NP_116202.2 UniGene:Hs.741264
ProteinModelPortal:Q5T4D3 SMR:Q5T4D3 STRING:Q5T4D3
PhosphoSite:Q5T4D3 DMDM:134035049 PRIDE:Q5T4D3 DNASU:84899
Ensembl:ENST00000342624 Ensembl:ENST00000376234
Ensembl:ENST00000423847 GeneID:84899 KEGG:hsa:84899 UCSC:uc001vot.3
UCSC:uc001vou.3 UCSC:uc001vov.1 CTD:84899 GeneCards:GC13M101256
HGNC:HGNC:25904 HPA:HPA016489 neXtProt:NX_Q5T4D3
PharmGKB:PA142670721 InParanoid:Q5T4D3 OrthoDB:EOG473PQV
ChiTaRS:TMTC4 GenomeRNAi:84899 NextBio:75256 ArrayExpress:Q5T4D3
Bgee:Q5T4D3 CleanEx:HS_TMTC4 Genevestigator:Q5T4D3 Uniprot:Q5T4D3
Length = 741
Score = 268 (99.4 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 59/119 (49%), Positives = 80/119 (67%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNY-LACGLKPRSFH 60
AI+ N D+Q +TP+GDL+++D+WG+ ++S SH SYRPLTVLTFR+NY L+ G P FH
Sbjct: 49 AIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFH 108
Query: 61 LINNLLHSAITYL-VYILS------SYVLPNRR------ARLFASLIFAVHPIHTEAVS 106
++N LLHS I+ L V + S Y RR A L A+L+FAVHP+HTE V+
Sbjct: 109 VVNILLHSGISVLMVDVFSVLFGGLQYTSKGRRLHLAPRASLLAALLFAVHPVHTECVA 167
>UNIPROTKB|F1MG00 [details] [associations]
symbol:TMTC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 GO:GO:0005783
Gene3D:1.25.40.10 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 OMA:LLCYIKH EMBL:DAAA02012520 IPI:IPI00999288
Ensembl:ENSBTAT00000003752 Uniprot:F1MG00
Length = 646
Score = 259 (96.2 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 54/106 (50%), Positives = 69/106 (65%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAI TN D+ +TP +F ND+WGT +T SH SYRPL L+FRLN+ GL P S+H
Sbjct: 24 RAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYH 83
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N LLH+A+T L S +L + A L+FA HPIHTEAV+
Sbjct: 84 LVNVLLHAAVTGLFTNFSKILLGDGYWTFMAGLMFASHPIHTEAVA 129
>UNIPROTKB|Q8N394 [details] [associations]
symbol:TMTC2 "Transmembrane and TPR repeat-containing
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0005783 GO:GO:0016021 EMBL:CH471054 eggNOG:COG0457
Gene3D:1.25.40.10 HSSP:O15294 InterPro:IPR013618 Pfam:PF08409
EMBL:AK074634 EMBL:AK315285 EMBL:AL834509 EMBL:BC093852
EMBL:BC093854 IPI:IPI00166522 RefSeq:NP_689801.1 UniGene:Hs.577775
ProteinModelPortal:Q8N394 SMR:Q8N394 IntAct:Q8N394
PhosphoSite:Q8N394 DMDM:74759843 PaxDb:Q8N394 PRIDE:Q8N394
DNASU:160335 Ensembl:ENST00000321196 GeneID:160335 KEGG:hsa:160335
UCSC:uc001szs.1 CTD:160335 GeneCards:GC12P083080 HGNC:HGNC:25440
HPA:HPA026954 HPA:HPA026955 neXtProt:NX_Q8N394 PharmGKB:PA142670719
HOGENOM:HOG000010230 HOVERGEN:HBG054555 InParanoid:Q8N394
OMA:LLCYIKH OrthoDB:EOG46DM28 PhylomeDB:Q8N394 ChiTaRS:TMTC2
GenomeRNAi:160335 NextBio:87945 ArrayExpress:Q8N394 Bgee:Q8N394
CleanEx:HS_TMTC2 Genevestigator:Q8N394 Uniprot:Q8N394
Length = 836
Score = 260 (96.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 54/106 (50%), Positives = 69/106 (65%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAI TN D+ +TP +F ND+WGT +T SH SYRPL L+FRLN+ GL P S+H
Sbjct: 29 RAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYH 88
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N LLH+A+T L S +L + A L+FA HPIHTEAV+
Sbjct: 89 LVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAVA 134
>RGD|1309848 [details] [associations]
symbol:Tmtc2 "transmembrane and tetratricopeptide repeat
containing 2" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 RGD:1309848 GO:GO:0005783
Gene3D:1.25.40.10 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 OMA:LLCYIKH IPI:IPI00360175 Ensembl:ENSRNOT00000006086
Uniprot:F1M369
Length = 668
Score = 258 (95.9 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 54/106 (50%), Positives = 69/106 (65%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAI TN D+ +TP +F ND+WGT +T SH SYRPL L+FRLN+ GL P S+H
Sbjct: 2 RAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYH 61
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N LLH+A+T L S +L + A L+FA HPIHTEAV+
Sbjct: 62 LVNVLLHAAVTGLFTRFSKALLGDGYWTFMAGLMFASHPIHTEAVA 107
>MGI|MGI:1914057 [details] [associations]
symbol:Tmtc2 "transmembrane and tetratricopeptide repeat
containing 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 MGI:MGI:1914057 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10 HSSP:O15294
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
CTD:160335 HOGENOM:HOG000010230 HOVERGEN:HBG054555 OMA:LLCYIKH
OrthoDB:EOG46DM28 EMBL:AK052344 EMBL:BC034657 EMBL:BC092226
EMBL:BC138362 EMBL:BC138363 IPI:IPI00272913 IPI:IPI00830475
RefSeq:NP_796342.2 UniGene:Mm.25225 ProteinModelPortal:Q56A06
SMR:Q56A06 PhosphoSite:Q56A06 PRIDE:Q56A06
Ensembl:ENSMUST00000061506 GeneID:278279 KEGG:mmu:278279
UCSC:uc007gym.1 UCSC:uc007gyn.1 InParanoid:B2RRD8 NextBio:393916
Bgee:Q56A06 Genevestigator:Q56A06 Uniprot:Q56A06
Length = 836
Score = 258 (95.9 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 54/106 (50%), Positives = 69/106 (65%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAI TN D+ +TP +F ND+WGT +T SH SYRPL L+FRLN+ GL P S+H
Sbjct: 29 RAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYH 88
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N LLH+A+T L S +L + A L+FA HPIHTEAV+
Sbjct: 89 LVNVLLHAAVTGLFTRFSKALLGDGYWTFMAGLMFASHPIHTEAVA 134
>MGI|MGI:1921050 [details] [associations]
symbol:Tmtc4 "transmembrane and tetratricopeptide repeat
containing 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:1921050 GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10
HSSP:O15294 GeneTree:ENSGT00550000074327 OMA:GYCMLLT
InterPro:IPR013618 Pfam:PF08409 HOVERGEN:HBG106148 CTD:84899
OrthoDB:EOG473PQV EMBL:AK015064 EMBL:AK017580 EMBL:AK028333
EMBL:AK033947 EMBL:AK039093 EMBL:AK043293 EMBL:AK044391
EMBL:AK045271 EMBL:AK049748 EMBL:AK082526 EMBL:BC031368
IPI:IPI00458708 IPI:IPI00622590 IPI:IPI00831533 RefSeq:NP_082927.1
UniGene:Mm.271988 ProteinModelPortal:Q8BG19 SMR:Q8BG19
PhosphoSite:Q8BG19 PRIDE:Q8BG19 Ensembl:ENSMUST00000037726
Ensembl:ENSMUST00000126867 Ensembl:ENSMUST00000148661 GeneID:70551
KEGG:mmu:70551 UCSC:uc007vbi.1 UCSC:uc007vbj.1 UCSC:uc007vbm.1
InParanoid:Q8BG19 NextBio:331838 Bgee:Q8BG19 Genevestigator:Q8BG19
Uniprot:Q8BG19
Length = 741
Score = 256 (95.2 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 55/119 (46%), Positives = 78/119 (65%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNY-LACGLKPRSFH 60
AI+ N D+Q TP+GDL+++D+WG+ ++S SH SYRPLTVLTFR+NY L+ G P FH
Sbjct: 48 AIVNNKDLQSDTPLGDLWHHDFWGSKLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFH 107
Query: 61 LINNLLHSAITYLVYILSSYVLPNR-------------RARLFASLIFAVHPIHTEAVS 106
++N LLH +I+ L+ + S + RA L A+L+FAVHP+HTE V+
Sbjct: 108 VVNILLHGSISILMLDVFSVLFGGLQYTGKGQRVHLAPRASLLATLLFAVHPVHTECVA 166
>UNIPROTKB|F1NNA8 [details] [associations]
symbol:Gga.1615 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005739 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 OMA:RLYPRHA EMBL:AADN02006469 EMBL:AADN02006470
IPI:IPI00593086 Ensembl:ENSGALT00000021134 Uniprot:F1NNA8
Length = 945
Score = 257 (95.5 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 51/106 (48%), Positives = 64/106 (60%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AI+ NPDV+ PV F ND+WG + SH SYRPL VLTF+LN L G+ P FH
Sbjct: 64 AIVNNPDVRAAAPVAAAFTNDFWGKRMAENTSHKSYRPLCVLTFKLNILLAGMNPFYFHA 123
Query: 62 INNLLHSAITY-LVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N +LH +T L+Y V + R +L FAVHPIHTEAV+
Sbjct: 124 VNVILHCLVTLVLMYTCDKAVFKDCRLAFVTALFFAVHPIHTEAVT 169
>UNIPROTKB|F1PW92 [details] [associations]
symbol:TMTC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 GO:GO:0005783
Gene3D:1.25.40.10 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 CTD:160335 OMA:LLCYIKH EMBL:AAEX03009894
EMBL:AAEX03009895 EMBL:AAEX03009896 RefSeq:XP_539701.3
Ensembl:ENSCAFT00000009546 GeneID:482584 KEGG:cfa:482584
Uniprot:F1PW92
Length = 836
Score = 256 (95.2 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 53/106 (50%), Positives = 69/106 (65%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAI TN D+ +TP +F ND+WGT +T SH SYRPL L+FRLN+ GL P S+H
Sbjct: 29 RAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAVGGLDPWSYH 88
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N LLH+A+T + S +L + A L+FA HPIHTEAV+
Sbjct: 89 LVNVLLHAAVTGVFTSFSKTLLGDGCWTFMAGLLFASHPIHTEAVA 134
>UNIPROTKB|F1NPM4 [details] [associations]
symbol:TMTC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 GO:GO:0005783
Gene3D:1.25.40.10 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 OMA:LLCYIKH EMBL:AADN02009732 EMBL:AADN02009733
EMBL:AADN02009734 IPI:IPI00598383 ProteinModelPortal:F1NPM4
Ensembl:ENSGALT00000017879 Uniprot:F1NPM4
Length = 814
Score = 250 (93.1 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 51/106 (48%), Positives = 68/106 (64%)
Query: 1 RAILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
RAI TN D+ +TP +F ND+WGT +T SH SYRPL L+FR+N+ G+ P +H
Sbjct: 7 RAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRINHAIGGMDPWGYH 66
Query: 61 LINNLLHSAITYLVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
L+N LLH+A+T L S + + L A L+FA HPIHTEAV+
Sbjct: 67 LVNILLHAAVTGLFTNFSRILFGDGYWTLIAGLLFASHPIHTEAVA 112
>MGI|MGI:3039590 [details] [associations]
symbol:Tmtc1 "transmembrane and tetratricopeptide repeat
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:3039590 GO:GO:0016021 GO:GO:0005739 eggNOG:COG0457
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
CTD:83857 HOVERGEN:HBG106148 OrthoDB:EOG41C6VN EMBL:AK046396
EMBL:AK137545 EMBL:AC126683 EMBL:AC142274 IPI:IPI00653264
IPI:IPI01007647 RefSeq:NP_945318.2 UniGene:Mm.137858
ProteinModelPortal:Q3UV71 SMR:Q3UV71 STRING:Q3UV71
PhosphoSite:Q3UV71 PRIDE:Q3UV71 Ensembl:ENSMUST00000060095
Ensembl:ENSMUST00000100772 GeneID:387314 KEGG:mmu:387314
UCSC:uc009eti.2 UCSC:uc009etj.2 HOGENOM:HOG000067906
InParanoid:Q3UV71 OMA:RLYPRHA NextBio:405818 Bgee:Q3UV71
Genevestigator:Q3UV71 Uniprot:Q3UV71
Length = 942
Score = 249 (92.7 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 50/107 (46%), Positives = 66/107 (61%)
Query: 2 AILTNPDVQLKTPVG-DLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
AI+ NPDV+ TP+ +F ND+WG + SH SYRPL VL+FRLN G+ P FH
Sbjct: 55 AIVNNPDVRPGTPLRWAIFANDFWGKGLADSTSHKSYRPLCVLSFRLNIFLTGMNPFYFH 114
Query: 61 LINNLLHSAITY-LVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N +LH +T L+Y V NR +L+FAVHP+HTEAV+
Sbjct: 115 AVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVA 161
>FB|FBgn0020312 [details] [associations]
symbol:CG4050 species:7227 "Drosophila melanogaster"
[GO:0016262 "protein N-acetylglucosaminyltransferase activity"
evidence=ISS] [GO:0017122 "protein N-acetylglucosaminyltransferase
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:AE013599 GO:GO:0016021 eggNOG:COG0457
Gene3D:1.25.40.10 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 EMBL:AY052013 EMBL:X92653 RefSeq:NP_477246.2
RefSeq:NP_726030.1 UniGene:Dm.5951 ProteinModelPortal:Q7K4B6
SMR:Q7K4B6 PRIDE:Q7K4B6 EnsemblMetazoa:FBtr0071637
EnsemblMetazoa:FBtr0071638 GeneID:37401 KEGG:dme:Dmel_CG4050
UCSC:CG4050-RA FlyBase:FBgn0020312 InParanoid:Q7K4B6 OMA:EAEMWMK
OrthoDB:EOG4VX0M4 PhylomeDB:Q7K4B6 GenomeRNAi:37401 NextBio:803454
Bgee:Q7K4B6 Uniprot:Q7K4B6
Length = 926
Score = 200 (75.5 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 38/72 (52%), Positives = 50/72 (69%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
AI N D++ TP+ ++F ND+WGTP+ SH SYRPLTVLTFR NYL L+P +HL
Sbjct: 63 AIRDNKDLRPHTPLINVFLNDFWGTPMRKEQSHKSYRPLTVLTFRFNYLLHALEPFGYHL 122
Query: 62 INNLLHSAITYL 73
+N LLH ++ L
Sbjct: 123 VNLLLHLSVCLL 134
Score = 74 (31.1 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 78 SSYVLPNRRARLFASLIFAVHPIHTEAVS 106
SS V ASL+FAVHP+HTEAV+
Sbjct: 159 SSSVSQLNTCAFVASLLFAVHPVHTEAVT 187
>UNIPROTKB|Q8IUR5 [details] [associations]
symbol:TMTC1 "Transmembrane and TPR repeat-containing
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0016021 GO:GO:0005739 eggNOG:COG0457
Gene3D:1.25.40.10 HSSP:O15294 EMBL:AC012151 InterPro:IPR013618
Pfam:PF08409 EMBL:GQ865601 EMBL:AK055962 EMBL:AK127297
EMBL:AC009320 EMBL:AC009510 EMBL:AC022078 EMBL:BC028716
EMBL:BC042083 EMBL:AF319520 IPI:IPI00043430 IPI:IPI00216822
IPI:IPI00444554 IPI:IPI00795924 IPI:IPI00977296
RefSeq:NP_001180380.1 RefSeq:NP_787057.2 UniGene:Hs.401954
ProteinModelPortal:Q8IUR5 SMR:Q8IUR5 STRING:Q8IUR5
PhosphoSite:Q8IUR5 DMDM:269849473 PaxDb:Q8IUR5 PRIDE:Q8IUR5
Ensembl:ENST00000256062 Ensembl:ENST00000381224
Ensembl:ENST00000539277 GeneID:83857 KEGG:hsa:83857 UCSC:uc001riy.3
UCSC:uc001riz.3 UCSC:uc001rja.3 UCSC:uc001rjc.1 CTD:83857
GeneCards:GC12M029653 HGNC:HGNC:24099 HPA:HPA016720
neXtProt:NX_Q8IUR5 PharmGKB:PA142670718 HOVERGEN:HBG106148
InParanoid:Q8IUR5 OrthoDB:EOG41C6VN ChiTaRS:TMTC1 GenomeRNAi:83857
NextBio:72853 ArrayExpress:Q8IUR5 Bgee:Q8IUR5 CleanEx:HS_TMTC1
Genevestigator:Q8IUR5 Uniprot:Q8IUR5
Length = 882
Score = 247 (92.0 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 50/107 (46%), Positives = 65/107 (60%)
Query: 2 AILTNPDVQLKTPVG-DLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
AI+ NPDV+ P+ +F ND+WG + SH SYRPL VLTF+LN G+ P FH
Sbjct: 56 AIVNNPDVRPGAPLRWGIFTNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFH 115
Query: 61 LINNLLHSAITY-LVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N +LH +T L+Y V NR +L+FAVHPIHTEAV+
Sbjct: 116 AVNIILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVA 162
>UNIPROTKB|F1N5E9 [details] [associations]
symbol:TMTC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005739 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:RLYPRHA EMBL:DAAA02013961 EMBL:DAAA02013962 EMBL:DAAA02013963
EMBL:DAAA02013964 EMBL:DAAA02013965 EMBL:DAAA02013966
IPI:IPI00706299 UniGene:Bt.45401 ProteinModelPortal:F1N5E9
Ensembl:ENSBTAT00000007064 NextBio:20875950 Uniprot:F1N5E9
Length = 939
Score = 245 (91.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 49/107 (45%), Positives = 66/107 (61%)
Query: 2 AILTNPDVQLKTPV-GDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
AI+ NPDV+ P+ +F+ND+WG + SH SYRPL VLTF+LN G+ P FH
Sbjct: 56 AIVNNPDVRPGAPLLWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFMTGMDPFYFH 115
Query: 61 LINNLLHSAITY-LVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
+N +LH +T L+Y V NR +L+FAVHP+HTEAV+
Sbjct: 116 AVNVILHCLVTLVLMYTCDKTVFRNRGLAFVTALLFAVHPVHTEAVA 162
>WB|WBGene00018175 [details] [associations]
symbol:F38B6.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13176 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 HSSP:O15294
GeneTree:ENSGT00550000074327 EMBL:FO080973 PIR:T16298
RefSeq:NP_509123.2 ProteinModelPortal:Q20144 SMR:Q20144
EnsemblMetazoa:F38B6.6.1 EnsemblMetazoa:F38B6.6.2 GeneID:185454
KEGG:cel:CELE_F38B6.6 UCSC:F38B6.6 CTD:185454 WormBase:F38B6.6
HOGENOM:HOG000007190 InParanoid:Q20144 OMA:GYCMLLT NextBio:928344
InterPro:IPR013618 Pfam:PF08409 Uniprot:Q20144
Length = 690
Score = 215 (80.7 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 43/109 (39%), Positives = 64/109 (58%)
Query: 2 AILTNPDVQLKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFHL 61
+I+ NP V K P+ +F+ D+WG I+S NSH SYRP+T TF LNY +H+
Sbjct: 58 SIVNNPIVNGKDPLLQIFSRDFWGRSISSSNSHKSYRPVTTFTFWLNYKLHETSTLGYHV 117
Query: 62 INNLLHSAITYLVYILSS---YVLPNRRARLFASLIFAVHPIHTEAVSD 107
+N + H+ T + Y L ++ AS++FAVHP+HTEAV++
Sbjct: 118 VNIICHTVATLVFYKLGKQLEHIFDFFNIAFSASILFAVHPVHTEAVAN 166
>RGD|1564868 [details] [associations]
symbol:Tmtc1 "transmembrane and tetratricopeptide repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1564868 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
IPI:IPI00949555 ProteinModelPortal:D4A9Y4
Ensembl:ENSRNOT00000002535 UCSC:RGD:1564868 ArrayExpress:D4A9Y4
Uniprot:D4A9Y4
Length = 905
Score = 202 (76.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 44/108 (40%), Positives = 59/108 (54%)
Query: 2 AILTNPDVQLKTPVG-DLFNNDYWGTPITSPNSHG-SYRPLTVLTFRLNYLACGLKPRSF 59
AI+ NPDV+ P+ +F ND+WG S H SY PL + LN G+ P F
Sbjct: 55 AIVNNPDVRPGAPLRWAVFANDFWGKKFVSATCHECSYHPLCLWWTELNIFLTGMNPFYF 114
Query: 60 HLINNLLHSAITY-LVYILSSYVLPNRRARLFASLIFAVHPIHTEAVS 106
H +N +LH +T L+Y V NR +L+FAVHP+HTEAV+
Sbjct: 115 HAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVA 162
>WB|WBGene00017983 [details] [associations]
symbol:F32D1.3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
Gene3D:1.25.40.10 EMBL:FO081012 GeneTree:ENSGT00550000074327
InterPro:IPR013618 Pfam:PF08409 OMA:HMRWRES PIR:T03919
RefSeq:NP_504200.1 ProteinModelPortal:O16296 SMR:O16296
EnsemblMetazoa:F32D1.3 GeneID:178832 KEGG:cel:CELE_F32D1.3
UCSC:F32D1.3 CTD:178832 WormBase:F32D1.3 eggNOG:NOG81571
InParanoid:O16296 NextBio:902744 Uniprot:O16296
Length = 774
Score = 201 (75.8 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 47/106 (44%), Positives = 61/106 (57%)
Query: 2 AILTNPDVQLKTPVGDLF-NNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
AILTN DV +TP L +ND+WG PI SH SYRPL +FRL + GLK FH
Sbjct: 49 AILTNDDVLGRTPWRSLIVHNDFWGNPIGLQGSHKSYRPLITASFRLQFAVHGLKAELFH 108
Query: 61 LINNLLHSAITYLVYILSSYV-LPNRRARLFASLIFAVHPIHTEAV 105
+N + H + LV L+ + + L ++LIFA HPI +EAV
Sbjct: 109 GVNLICHMINSMLVLKLARQMRIMGNEFSLLSALIFACHPITSEAV 154
>FB|FBgn0038324 [details] [associations]
symbol:CG5038 species:7227 "Drosophila melanogaster"
[GO:0016262 "protein N-acetylglucosaminyltransferase activity"
evidence=ISS] [GO:0017122 "protein N-acetylglucosaminyltransferase
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:AE014297 GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10
HSSP:O15294 GeneTree:ENSGT00550000074327 OMA:GYCMLLT
InterPro:IPR013618 Pfam:PF08409 EMBL:BT022723 RefSeq:NP_650451.1
UniGene:Dm.23321 ProteinModelPortal:Q9VF81 SMR:Q9VF81 IntAct:Q9VF81
MINT:MINT-984746 PRIDE:Q9VF81 EnsemblMetazoa:FBtr0083089
GeneID:41867 KEGG:dme:Dmel_CG5038 UCSC:CG5038-RA
FlyBase:FBgn0038324 InParanoid:Q9VF81 OrthoDB:EOG4R4XJ5
PhylomeDB:Q9VF81 GenomeRNAi:41867 NextBio:826003 Bgee:Q9VF81
Uniprot:Q9VF81
Length = 705
Score = 192 (72.6 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 47/110 (42%), Positives = 61/110 (55%)
Query: 2 AILTNPDVQ-LKTPVGDLFNNDYWGTPITSPNSHGSYRPLTVLTFRLNYLACGLKPRSFH 60
AI+ N DV L T +F +D+WG + S +SH S+RPLT L F Y GL
Sbjct: 44 AIVKNRDVNSLPTNWTAIFTHDFWGASLLSSDSHKSFRPLTTLMFHCEYALLGLSAAHMK 103
Query: 61 LINNLLHSAITYLVY--ILSSYVLPNRRAR--LFASLIFAVHPIHTEAVS 106
+N LLH T L++ I S YV AR + ++ +FA HPIHTEAVS
Sbjct: 104 FLNLLLHCVNTLLMWRLIRSLYVPEVSTARWAILSAALFAAHPIHTEAVS 153
>UNIPROTKB|Q74A82 [details] [associations]
symbol:GSU2508 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 RefSeq:NP_953554.2 GeneID:2685366 KEGG:gsu:GSU2508
PATRIC:22027865 HOGENOM:HOG000072814 ProtClustDB:CLSK2306806
BioCyc:GSUL243231:GH27-2460-MONOMER Uniprot:Q74A82
Length = 538
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 37 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFA 96
YRPL ++ L++ G+ P FH +N +LH+ LVY L + A L A+L+FA
Sbjct: 70 YRPLNRASYLLDFRLFGMNPAGFHAVNMVLHALNVLLVYQLGRRLFSAGPAALTAALLFA 129
Query: 97 VHPIHTEAVS 106
VHPI+ E V+
Sbjct: 130 VHPINVETVA 139
>TIGR_CMR|GSU_2508 [details] [associations]
symbol:GSU_2508 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 RefSeq:NP_953554.2 GeneID:2685366 KEGG:gsu:GSU2508
PATRIC:22027865 HOGENOM:HOG000072814 ProtClustDB:CLSK2306806
BioCyc:GSUL243231:GH27-2460-MONOMER Uniprot:Q74A82
Length = 538
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 37 YRPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILSSYVLPNRRARLFASLIFA 96
YRPL ++ L++ G+ P FH +N +LH+ LVY L + A L A+L+FA
Sbjct: 70 YRPLNRASYLLDFRLFGMNPAGFHAVNMVLHALNVLLVYQLGRRLFSAGPAALTAALLFA 129
Query: 97 VHPIHTEAVS 106
VHPI+ E V+
Sbjct: 130 VHPINVETVA 139
>UNIPROTKB|Q74D21 [details] [associations]
symbol:xapA "Membrane protein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13181 PROSITE:PS50293 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952549.1
ProteinModelPortal:Q74D21 GeneID:2686026 KEGG:gsu:GSU1498
PATRIC:22025841 OMA:DLLCCFF ProtClustDB:CLSK763137
BioCyc:GSUL243231:GH27-1481-MONOMER Uniprot:Q74D21
Length = 582
Score = 113 (44.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 35 GSY-RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILS-SY---VLPNRRARL 89
G Y RP+T+L++ L+ A P H++N LH T+LV++LS +Y V +R L
Sbjct: 74 GDYFRPITILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRAYLNKVTDSRWPSL 133
Query: 90 FASLIFAVHPIHTEAV 105
A+LIF + P++TE+V
Sbjct: 134 AAALIFGLSPLNTESV 149
>TIGR_CMR|GSU_1498 [details] [associations]
symbol:GSU_1498 "membrane protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50293 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952549.1
ProteinModelPortal:Q74D21 GeneID:2686026 KEGG:gsu:GSU1498
PATRIC:22025841 OMA:DLLCCFF ProtClustDB:CLSK763137
BioCyc:GSUL243231:GH27-1481-MONOMER Uniprot:Q74D21
Length = 582
Score = 113 (44.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 35 GSY-RPLTVLTFRLNYLACGLKPRSFHLINNLLHSAITYLVYILS-SY---VLPNRRARL 89
G Y RP+T+L++ L+ A P H++N LH T+LV++LS +Y V +R L
Sbjct: 74 GDYFRPITILSYFLDVKAGDADPLISHILNVGLHLFNTFLVFVLSRAYLNKVTDSRWPSL 133
Query: 90 FASLIFAVHPIHTEAV 105
A+LIF + P++TE+V
Sbjct: 134 AAALIFGLSPLNTESV 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.141 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 130 130 0.00091 102 3 11 22 0.48 30
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 593 (63 KB)
Total size of DFA: 136 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.95u 0.07s 14.02t Elapsed: 00:00:14
Total cpu time: 13.95u 0.07s 14.02t Elapsed: 00:00:14
Start: Thu Aug 15 13:37:59 2013 End: Thu Aug 15 13:38:13 2013