RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10417
(385 letters)
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 212 bits (540), Expect = 6e-66
Identities = 82/340 (24%), Positives = 140/340 (41%), Gaps = 37/340 (10%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYY---QFTPYNW 79
D+II G G+ G A RL+E P+ VL+IE+G + ++ + Y + +
Sbjct: 17 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDH 76
Query: 80 GFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNTGW-SF 138
++T N L G G+GGST++NG +TR + WE++ ++
Sbjct: 77 AYETVEL-----ATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNW 131
Query: 139 DDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKVGLFNSDTVYHN 198
D+V Y + ER P H N S +
Sbjct: 132 DNVAAYSLQAERARAPNAKQIAAGHYFNA------------------------SCHGVNG 167
Query: 199 TNGLLNVEYSPYKSKLSDIFLKSSKELGY-TNIDYNNPNTKIGFSIVQSTIKNGRRMTAS 257
T + S + + + ++ G T D+ + + ++ R A+
Sbjct: 168 TVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAA 227
Query: 258 KAYLKPIIDRTNLHVIKNSRVVKIIID--PISKQAKGVELV-KNGHKRSVFARKEVIVSS 314
+ +L P R NL V+ V K+++ + +A GVE G+ +V+A+ EV++++
Sbjct: 228 REWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAA 287
Query: 315 GAFNSPKLLMLSGVGPREHLTELGIPVVQDLRVGDNLMEH 354
G+ SP +L SG+G + L LGI V DL VG M
Sbjct: 288 GSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLCSMMP 327
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 210 bits (535), Expect = 4e-65
Identities = 89/347 (25%), Positives = 146/347 (42%), Gaps = 46/347 (13%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYY---QFTPYN 78
YD+II G G+ G VA +L+E P KVL+IE G + ++ + Y T +
Sbjct: 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVD 82
Query: 79 WGFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWES-LGNTGWS 137
+ T P N N GKG+GGST+ING+ +TR + WE G GW+
Sbjct: 83 QNYLTVPLIN------NRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWN 136
Query: 138 FDDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKVGLFNSDTVYH 197
+D++ +Y KK E P H+ N H
Sbjct: 137 WDNMFEYMKKAEAARTPTAAQLAAGHSFNA---------------------------TCH 169
Query: 198 NTNGLLNV---EYSPYKSKLSDIFLKSSKELG-YTNIDYNNPNTKIGFSIVQSTIKNGRR 253
TNG + + S + + + LG D+ + + I+ + +N R
Sbjct: 170 GTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVR 229
Query: 254 MTASKAYLKPIIDRTNLHVIKNSRVVKIIID--PISKQAKGVELVKNGHKR-SVFARKEV 310
+ A++A+L P R+NL ++ V K++ QA GV N VFA+ EV
Sbjct: 230 VDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEV 289
Query: 311 IVSSGAFNSPKLLMLSGVGPREHLTELGIPVVQDLR--VGDNLMEHV 355
++++G+ SP +L SG+G + L + + + DL + + +
Sbjct: 290 LLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMSREL 336
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 165 bits (418), Expect = 5e-48
Identities = 42/353 (11%), Positives = 91/353 (25%), Gaps = 60/353 (16%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
+YD +IVG+G GC A L +KV + + G+ D + ++ F
Sbjct: 4 KYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFV 62
Query: 83 TTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWE----------SLG 132
Q L F R N + +G
Sbjct: 63 NVIQGQLMSVSVPVNTLVVDTLSPTSW--QASTFFVRNGSNPEQDPLRNLSGQAVTRVVG 120
Query: 133 NTGWSFDDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKVGLFNS 192
+ F + +R L + + Y+
Sbjct: 121 GMSTHWTCATPRFDREQR----PLLVKDDADADDAEWDRLYT------------------ 158
Query: 193 DTVYHNTNGLLNVEYSPYKSKLSDIFLKSSKELGYTNIDYNNPNTKIGFS----IVQSTI 248
+ Y +D F +S + N + F
Sbjct: 159 -------------KAESYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRS 205
Query: 249 KNGRRMTASKAYLKPII------DRTNLHVIKNSRVVKIIIDPISKQAKGVELV-KNGHK 301
+++ ++ +++ + ++ + + + +
Sbjct: 206 PTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGD 265
Query: 302 RSVFARKEVIVSSGAFNSPKLLMLSGVGPREHLTELGIPVVQDLRVGDNLMEH 354
R ++++GA ++ +LL+ SG G P + +G + M
Sbjct: 266 RFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPELLPS-LGSHRMGF 317
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 161 bits (408), Expect = 1e-46
Identities = 57/366 (15%), Positives = 104/366 (28%), Gaps = 69/366 (18%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLI------------- 68
D +++G+G GG V A RL++ ++E G I
Sbjct: 6 DRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMW 64
Query: 69 ------SHYYQFTPYNWGFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFP 122
F + + QG+GVGG +++NG +
Sbjct: 65 LADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKR 124
Query: 123 NDFNEWESLGNTGWSFDDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSD 182
N F E ++ ++ YF + N S K +
Sbjct: 125 NYFEEILPSVDSNEMYNK---YFPRANT----------GLGVNNIDQAWFESTEWYKFAR 171
Query: 183 IFLKVGLFNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKSSKELGYTNIDYNNPNTKIGFS 242
K +S + F+ + + Y + TK G
Sbjct: 172 TGRKT---------------------AQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLG 210
Query: 243 IVQSTIKNGRRMTASKAYLKPIIDRTNLHVIKNSRVVKIIIDPISKQAKGVELVKNGHKR 302
N + + K YL L + RV K+ V + + +
Sbjct: 211 GEVIYGNNAGKKSLDKTYLAQAAATGKLTITTLHRVTKVAPAT--GSGYSVTMEQIDEQG 268
Query: 303 SVFAR-----KEVIVSSGAFNSPKLLMLSGVGPREHLTELGIPVVQDLRVGDNLMEHVAY 357
+V A V ++G+ + KLL+ + +P + +VG+ +
Sbjct: 269 NVVATKVVTADRVFFAAGSVGTSKLLVSMK-------AQGHLPNLSS-QVGEGWGVLLNK 320
Query: 358 SALTFG 363
+ FG
Sbjct: 321 ATDNFG 326
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 152 bits (385), Expect = 2e-43
Identities = 51/363 (14%), Positives = 100/363 (27%), Gaps = 66/363 (18%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR--------------------IFT 63
+++G G G V A RL E + L++E G F
Sbjct: 3 VPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFK 61
Query: 64 DLVLISHYYQFTPYNWGFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPN 123
+ P + +Q G+GVGG +++NG + +
Sbjct: 62 NRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRS 121
Query: 124 DFNEWESLGNTGWSFDDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDI 183
F E S + +YF + + + K + +
Sbjct: 122 YFEEIL---PRVDSSEMYDRYFPRANS----------MLRVNHIDTKWFEDTEWYKFARV 168
Query: 184 FLKVGLFNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKSSKELGYTNIDYNNPNTKIGFSI 243
K+ L +F+ + + GY + K +
Sbjct: 169 SR---------------------EQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALAT 207
Query: 244 VQSTIKNGRRMTASKAYLKPIIDRTNLHVIKNSRVVKIIIDPISKQAKGVELVKNGHK-- 301
N + + K YL + + + +V I A VE K
Sbjct: 208 EVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLL 267
Query: 302 -RSVFARKEVIVSSGAFNSPKLLMLSGVGPREHLTELGIPVVQDLRVGDNLMEHVAYSAL 360
+ + + + +G+ S +LL+ + +P + VG + +
Sbjct: 268 ATKEISCRYLFLGAGSLGSTELLVRAR-------DTGTLPNLNS-EVGAGWGCVLGKATD 319
Query: 361 TFG 363
+G
Sbjct: 320 DYG 322
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 140 bits (354), Expect = 5e-39
Identities = 75/373 (20%), Positives = 116/373 (31%), Gaps = 66/373 (17%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTP------ 76
YD+IIVGAG GG + A RLSE KVLL+E G T ++ + +
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 77 --YNWGFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNT 134
T G VGG T +NG ++ DF+
Sbjct: 61 PGLFESLFTDSNP----FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSV---GW 113
Query: 135 GWSFDDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKVGLFNSDT 194
S+ + Y K T
Sbjct: 114 PSSWTNHAPYTSKLSS---------------------------------------RLPST 134
Query: 195 VYHNTNGLLNVEYSPYKSKLSDIFLKSSKELGYTNIDYNNPNTKIGFSIVQSTIKNGRRM 254
+ +T+G Y + LK T D N + F NG+R
Sbjct: 135 DHPSTDGQR---YLEQSFNVVSQLLKGQGYNQATINDNPNYKDHV-FGYSAFDFLNGKRA 190
Query: 255 TASKAYLKPIIDRTNLHVIKNSRVVKIIIDPISKQAKGVEL----VKNGHKRSVFARKEV 310
YL+ + R N N V ++ + Q GV+ + V + V
Sbjct: 191 GPVATYLQTALARPNFTFKTNVMVSNVVRN--GSQILGVQTNDPTLGPNGFIPVTPKGRV 248
Query: 311 IVSSGAFNSPKLLMLSGVGPREHLTELGI-PVVQDLRVGDNLMEHVAYSALTFGINKTFS 369
I+S+GAF + ++L SG+GP + + + P N ++ T G + +
Sbjct: 249 ILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSA 308
Query: 370 VVTKRLLRQPIKT 382
VV +
Sbjct: 309 VVDSNVKVFGTNN 321
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 107 bits (268), Expect = 6e-27
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 17 NKRLLDEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTP 76
+ L YD++IVG G GC +A LSE +KVL++E G + +++ +
Sbjct: 20 DLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ 77
Query: 77 YNWGFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNTGW 136
KT ++ + + +G+ +GG++IIN ++ R + ++ W
Sbjct: 78 QEDDGKTPVER----FVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSAS----GVDW 129
Query: 137 SFDDVLKYFKKFE 149
D V + ++ E
Sbjct: 130 DMDLVNQTYEWVE 142
Score = 92.3 bits (228), Expect = 2e-21
Identities = 45/158 (28%), Positives = 64/158 (40%), Gaps = 6/158 (3%)
Query: 224 ELGYTNIDYNNPNTKIGFSIVQSTIKNGRRMTASKAYLKPIIDRTNLHVIKNSRVVKIII 283
E G + + + G I ST N A+ L NL V ++ V KII
Sbjct: 164 EAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSN-NLRVGVHASVEKIIF 222
Query: 284 DPISKQAKGVELVKNG----HKRSVFARKEVIVSSGAFNSPKLLMLSGVGPREHLTELGI 339
+ ++ H+ V ++ EVIVS+G +P+LL+LSGVGP +L+ L I
Sbjct: 223 SNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNI 282
Query: 340 PVVQDLR-VGDNLMEHVAYSALTFGINKTFSVVTKRLL 376
PVV VG L+ V VV
Sbjct: 283 PVVLSHPYVGQCLVGKVLDGDFRVTGINALRVVDGSTF 320
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 57.1 bits (136), Expect = 8e-10
Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 16/301 (5%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEA----GDEDRIFTDLVLISHYYQFTPY 77
+YD I++G G+ C+++ LS KVL I+ G E T L + Q
Sbjct: 4 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPIS 62
Query: 78 NWGFKTTPQKNACLGLPNN-QCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNTGW 136
++ K+ + + L G+ + + + G
Sbjct: 63 KEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYK 122
Query: 137 SFDDVLKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKVGLFNSDTVY 196
+ ++ + + + S ++ D ++ +
Sbjct: 123 VPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLG 182
Query: 197 HNTNGLLNVEYSPYKSKLSDIFLKSSKELGYTNIDYNNPNTKIGFSIVQSTIKNGRRMTA 256
++T + + + + D + ++ + Y + G S + +
Sbjct: 183 NSTKEFIGHAMALWTN--DDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQ 240
Query: 257 SKAYLKPIIDRTNLHVIKNSRVVKIIIDPISKQAKGVELVKNGHKRSVFARKEVIVSSGA 316
+ + ++ + +++ + + +GV F VI
Sbjct: 241 G---FARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGV--KTKLGT---FKAPLVIADPTY 292
Query: 317 F 317
F
Sbjct: 293 F 293
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 49.1 bits (115), Expect = 4e-07
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
+EYD I++G G+ C+++ +S KVL ++
Sbjct: 5 EEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPY 40
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 47.6 bits (112), Expect = 1e-06
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
E D ++VGAG G A+ +S+ P+ +V +IE
Sbjct: 33 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 68
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 46.2 bits (108), Expect = 3e-06
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
+D I+VGAG G ++L++ K LL++A D
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFD 36
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 45.1 bits (105), Expect = 6e-06
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
Y+ +++G G+ G +A+ L++ + L E+G
Sbjct: 4 HYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESGT 37
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 44.6 bits (104), Expect = 1e-05
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
D D ++VG+G G A ++ KV+LIE
Sbjct: 15 DTVDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPVIG 52
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 44.0 bits (103), Expect = 1e-05
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
YD+IIVG+G+ G V A+ L ++ + KVL+IE +
Sbjct: 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNH 35
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 43.9 bits (102), Expect = 1e-05
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
YD I++G G G + A +E VLL++ G++
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNK 36
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 43.7 bits (102), Expect = 2e-05
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 19 RLLDEYDFIIVGAGVGGCVVAHRLSEVPS-----WKVLLIEAGDE 58
R +E D +IVGAG G A RL ++ + +V L+E
Sbjct: 28 RFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 42.0 bits (97), Expect = 5e-05
Identities = 11/67 (16%), Positives = 21/67 (31%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
+D +++GAG GG A + + +V +I+ L
Sbjct: 3 IFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLM 62
Query: 83 TTPQKNA 89
T +
Sbjct: 63 VTGAQYM 69
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 42.2 bits (97), Expect = 6e-05
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 4/136 (2%)
Query: 25 DFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE--DRIFTDLVLISHYYQFTPYNWGFK 82
I+VGAG+ G A RLSE +L++EA D R+ + NW
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK--TNFAGINVELGANWVEG 59
Query: 83 TTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNTGWSFDDVL 142
K + N L + + G D + + S +++
Sbjct: 60 VNGGKMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMG 119
Query: 143 KYFKKFERINIPELNS 158
+ + + S
Sbjct: 120 EKLSATLHASGRDDMS 135
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 41.7 bits (96), Expect = 8e-05
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
+I+GAG+ G +A L + +++ G
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 41.4 bits (96), Expect = 8e-05
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
DE D +I+G G GG V A + +++ +K IE
Sbjct: 2 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGA 37
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 41.5 bits (96), Expect = 1e-04
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNW 79
+ D +I+G+G G A + + KV+L+E T L T
Sbjct: 22 ETTDVVIIGSGGAGLAAAVSARDAGA-KVILLEKEPIPGGNTKLAAGGMNAAETKPQA 78
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 40.7 bits (94), Expect = 2e-04
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 7 APKREEFLYGNKRLLD--EYDFIIVGAGVGGCVVAHRLSEV---PSWKVLLIEAGDEDR 60
PK+ E ++ + E D +I+G G GC A+ + KV L+E +R
Sbjct: 3 YPKKYELYKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVER 61
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 40.7 bits (94), Expect = 2e-04
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
D +I+G+G G +A RL++ +V+++ G
Sbjct: 7 SCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTE 42
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 40.9 bits (94), Expect = 2e-04
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 25 DFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
D ++VG G+ G A L + V+++EA D
Sbjct: 1 DVVVVGGGISGMAAAKLLHDS-GLNVVVLEARD 32
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 40.5 bits (93), Expect = 2e-04
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 25 DFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
D +I GAG+GG A L + KV L+E+ E R
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 38
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 40.5 bits (93), Expect = 2e-04
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 25 DFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
+ +VG G+ G VAH L +L+E+
Sbjct: 2 NVAVVGGGISGLAVAHHLRS-RGTDAVLLESSAR 34
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 40.3 bits (93), Expect = 2e-04
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
+ ++VGAG G + + V+L++
Sbjct: 18 ETTQVLVVGAGSAGFNASLAAKK-AGANVILVDKAPFSG 55
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 39.5 bits (91), Expect = 3e-04
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
EYD +++G G GG A ++ KV ++E
Sbjct: 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYK 39
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 39.5 bits (91), Expect = 3e-04
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAG 56
YD++++G G GG A R +E+ + ++E+
Sbjct: 3 SYDYLVIGGGSGGLASARRAAEL-GARAAVVESH 35
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 39.5 bits (91), Expect = 3e-04
Identities = 12/82 (14%), Positives = 22/82 (26%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
YD +++GAG GG + + +V +I+ L
Sbjct: 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLM 62
Query: 83 TTPQKNACLGLPNNQCLWPQGK 104
T + W +
Sbjct: 63 VTGANYMDTIRESAGFGWELDR 84
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 39.4 bits (91), Expect = 3e-04
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
E + ++VGAG GG V A R +++ KV ++E G+ + ++ I + + +
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQ 61
Query: 83 TTPQKNACLGLPNNQCLWPQ 102
+ + N + +
Sbjct: 62 AKHSEEMGIKAENVTIDFAK 81
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 39.7 bits (91), Expect = 4e-04
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 8 PKREEFL----YGNKRLLDEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE--DRI 61
EEFL G K + +IVGAG+ G A+ L+ +V ++EA + R+
Sbjct: 11 NDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAG-HQVTVLEASERPGGRV 69
Query: 62 FTDLVLISHYYQFTPYNWGFKTTP 85
T + +Y +
Sbjct: 70 RTYRNEEAGWYANLGPMRLPEKHR 93
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 39.2 bits (90), Expect = 4e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAG 56
+ +I+G G GG V A R ++ +L+E
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 39.3 bits (90), Expect = 4e-04
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYN 78
++D II+G G GG A ++ KV++++ + T+ L
Sbjct: 3 DFDLIIIGGGSGGLAAAKEAAKF-DKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIP 57
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 39.1 bits (90), Expect = 4e-04
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
YD+I +G G GG +R + K LIEA +
Sbjct: 2 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 35
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 39.1 bits (90), Expect = 5e-04
Identities = 8/37 (21%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
+D +I+G G G V A + +++ + +E +
Sbjct: 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGK 39
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 39.2 bits (90), Expect = 5e-04
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSE-VPSWKVLLIEAGDEDR 60
+ D IVGAG G A ++ P+ K+ LI R
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMR 43
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 39.1 bits (90), Expect = 5e-04
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
+ II+GAG G A +L++ V + + G +
Sbjct: 3 QYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKK 38
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 39.4 bits (90), Expect = 5e-04
Identities = 6/38 (15%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
D +++G G+ G A + +++ R
Sbjct: 5 YCDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLIPVKR 41
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 39.3 bits (90), Expect = 6e-04
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPS----WKVLLIEAGDEDR 60
D +IVGAG G + A LSE KV +I+
Sbjct: 6 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV 48
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 38.6 bits (89), Expect = 8e-04
Identities = 23/204 (11%), Positives = 56/204 (27%), Gaps = 12/204 (5%)
Query: 26 FIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE----DRIFTDLVLISHYYQFTPYNWGF 81
+IVGAG G V+ +L+E +V +I+ D D + + P+ +
Sbjct: 5 ILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT 63
Query: 82 KTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNTGWSFDDV 141
N + K + + P + + + S D+
Sbjct: 64 DNETVWNYVNKHAEMMPYVNRVKATVNGQVFS-------LPINLHTINQFFSKTCSPDEA 116
Query: 142 LKYFKKFERINIPELNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKVGLFNSDTVYHNTNG 201
+ I + + + + +K + ++
Sbjct: 117 RALIAEKGDSTIADPQTFEEEALRFIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPV 176
Query: 202 LLNVEYSPYKSKLSDIFLKSSKEL 225
N + + + K + ++
Sbjct: 177 RFNYDDNYFNHKFQGMPKCGYTQM 200
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 39.1 bits (89), Expect = 8e-04
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 17/151 (11%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE--DRIFTDLV------LISHYYQFTPYN 78
II+G+GV G A +L V L+EA D R+ T L + N
Sbjct: 9 IIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGN 67
Query: 79 W--------GFKTTPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWES 130
+ K C N P+ K N + + + ++
Sbjct: 68 PMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNV 127
Query: 131 LGNTGWSFDDVLKYFKKFERINIPELNSDTV 161
L N S L+ + + ++ + +
Sbjct: 128 LNNKPVSLGQALEVVIQLQEKHVKDEQIEHW 158
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 37.7 bits (86), Expect = 0.001
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAG 56
YD I++G G GG A R + + KV L+E
Sbjct: 2 YDLIVIGGGSGGMAAARRAARH-NAKVALVEKS 33
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide
dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 37.7 bits (86), Expect = 0.001
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNW 79
++D I++GAG GG V A + +++ K LIE T L P
Sbjct: 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKA 58
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 37.9 bits (86), Expect = 0.001
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
++GAGV G A++L V + EA +
Sbjct: 5 AVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGK 35
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 37.6 bits (86), Expect = 0.002
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
EYD I +G G G + L + + L+++
Sbjct: 42 EYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWPF 76
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 37.0 bits (84), Expect = 0.002
Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEV-PSWKVLLIEAGDEDRIFTDLVLISHYY 72
F+++G G A + P +VL++ ++ + +S
Sbjct: 3 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIV--SEDPELPYMRPPLSKEL 52
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 36.8 bits (84), Expect = 0.003
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
E+D +++GAG G A ++S+ L+ R
Sbjct: 7 EFDAVVIGAGGAGMRAALQISQ-SGQTCALLSKVFPTR 43
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 36.7 bits (84), Expect = 0.003
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 22 DEYDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDE 58
+E D ++VGAG G +RL E V +IE +
Sbjct: 6 EEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 41
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 36.5 bits (83), Expect = 0.004
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTD 64
I+GAG G ++ L + +++E D +
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLGR 42
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 36.1 bits (82), Expect = 0.006
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 23 EYDFIIVGAGVGGCVVAHRLSEV-PSWKVLLIEAGDE 58
D IIVGAG G A+ +++ P KV +IE+
Sbjct: 50 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 86
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 35.4 bits (80), Expect = 0.007
Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
+++G+GV G A L+ + V ++
Sbjct: 10 VVLGSGVIGLSSALILAR-KGYSVHILARDL 39
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 35.1 bits (79), Expect = 0.008
Identities = 14/133 (10%), Positives = 33/133 (24%), Gaps = 6/133 (4%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFKTTPQ 86
++GAG A L+ + + + E + + + + N+ +
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD 67
Query: 87 KNAC------LGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEWESLGNTGWSFDD 140
L + +G + I G P + W +
Sbjct: 68 LGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEVLRDPKVKEALSPIKFNRWDLPE 127
Query: 141 VLKYFKKFERINI 153
V + +
Sbjct: 128 VDPETMQTSEPWV 140
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 35.1 bits (79), Expect = 0.009
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDR 60
+VG + G A L + V + E +
Sbjct: 8 AVVGGSISGLTAALMLRD-AGVDVDVYERSPQPL 40
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 33.7 bits (76), Expect = 0.024
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGD 57
+++GAGV G A + E VL
Sbjct: 4 VVIGAGVIGLSTALCIHER-YHSVLQPLDVK 33
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 32.8 bits (73), Expect = 0.039
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 27 IIVGAGVGGCVVAHRLSEV-PSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFKTTP 85
++VG G GG A + PS +V LIE + + +
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYYTCYLSNEVIGGDRKLESIKHGYDGL 65
Query: 86 QKNAC 90
+ +
Sbjct: 66 RAHGI 70
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 31.9 bits (72), Expect = 0.081
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRI 61
Y +IVGAG G A L++ +V L+ D +
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQKGV-RVGLLT-QSLDAV 38
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 31.0 bits (68), Expect = 0.15
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 27 IIVGAGVGGCVVAHRLSEV-PSWKVLLIEAGDE 58
I++G+ GG L + P ++ E GD
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 30.9 bits (68), Expect = 0.17
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
+++GAG+ L + + L+ GDE D +S + +
Sbjct: 7 VVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIR 61
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 30.4 bits (67), Expect = 0.37
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 27 IIVGAGVGGCVVAHRLS-EVPSWKVLLIEAGDE 58
I+GAG G V A L E +V L E
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 29.3 bits (64), Expect = 0.48
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 27 IIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNW 79
+IVG G GG +A +LS+ +++V +I+ ++
Sbjct: 4 VIVGNGPGGFELAKQLSQ--TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRL 54
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 28.9 bits (63), Expect = 0.78
Identities = 11/105 (10%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFKT 83
YD +IVG+G G A + + L+ +I + + ++
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARK-GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAG 60
Query: 84 TPQKNACLGLPNNQCLWPQGKGVGGSTIINGNIFTRGFPNDFNEW 128
+ + + K + + +
Sbjct: 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKAR 105
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 28.9 bits (63), Expect = 0.87
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 27 IIVGAGVGGCVVAHRLSEV--PSWKVLLIEAGD 57
+I+G G G A + + +V +I+
Sbjct: 5 VILGGGPAGYEAALVAATSHPETTQVTVIDCDG 37
>d2b2ya1 b.34.13.2 (A:108-187) ATP-dependent helicase CHD1 (Chromo
domain protein 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 80
Score = 26.7 bits (59), Expect = 1.1
Identities = 5/32 (15%), Positives = 10/32 (31%)
Query: 119 RGFPNDFNEWESLGNTGWSFDDVLKYFKKFER 150
+G P WE F + + ++
Sbjct: 49 QGLPYSECSWEDGALISKKFQACIDEYFSRKK 80
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 28.2 bits (61), Expect = 1.2
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 25 DFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQ 73
+ +IVG G+ G VA L + + GD I L +S Y
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYL 52
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic
domain {Thermotoga maritima [TaxId: 2336]}
Length = 350
Score = 27.4 bits (60), Expect = 2.6
Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 13/116 (11%)
Query: 67 LISHYY-QFTPYNWGFKTTPQKNACLGLPNNQCLWPQG----KGVGGSTIINGNIFTRGF 121
L+ Y + G+ +++ P+G + + +
Sbjct: 206 LVDLYLPDVLWNDMGWPEKGKEDLKYLFAYYYNKHPEGSVNDRWGVPHWDFKTAEYHVNY 265
Query: 122 PNDFNE--WE---SLGNT-GWSFDDVLKYFKKFERINIPELNSDTVYHNTNGLLNV 171
P D WE +G + G++ ++ ++ E + D V N LLNV
Sbjct: 266 PGDLPGYKWEFTRGIGLSFGYNRNEGPEHMLSVE--QLVYTLVDVVSKGGNLLLNV 319
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 26.8 bits (58), Expect = 3.3
Identities = 7/52 (13%), Positives = 14/52 (26%), Gaps = 1/52 (1%)
Query: 28 IVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNW 79
++G G G + L + +V + +LV
Sbjct: 5 VLGCGALGQLWLTALCKQ-GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA 55
>d2dy8a1 b.34.13.2 (A:279-347) ATP-dependent helicase CHD1 (Chromo
domain protein 1) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 69
Score = 25.2 bits (55), Expect = 3.8
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 119 RGFPNDFNEWESLGNTGWSFDDVLKYFKKFER 150
R D WE+ + + +K+F+ E
Sbjct: 34 RRLNYDEATWENATDIVKLAPEQVKHFQNREN 65
>d1es5a_ e.3.1.1 (A:) D-ala carboxypeptidase/transpeptidase
{Streptomyces sp., K15 [TaxId: 1931]}
Length = 260
Score = 26.8 bits (58), Expect = 4.5
Identities = 25/150 (16%), Positives = 43/150 (28%), Gaps = 22/150 (14%)
Query: 107 GGSTIINGNIFTRGFPNDFNEWESLGNTGWSFDDVLKYFKKFERINIPELNSDTVYHNTN 166
GST G N L NT + D + + + + N+
Sbjct: 108 SGSTRAARVKSFIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIASSAMKNST 167
Query: 167 GLLNVEYSPYKSKLSDIFLKVGLFNSDTVYHNTNGLLNVEYSPYKSKLSDIFLKSSKELG 226
V+ Y +K K G + + NTNGLL+ K G
Sbjct: 168 FRTVVKTKAYTAK---TVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKT-----------G 213
Query: 227 YTNIDYNNPNTKIGFSIVQSTIKNGRRMTA 256
+ + +V + + G+ +
Sbjct: 214 AGP--------EAKYCLVFAATRGGKTVIG 235
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 25.9 bits (56), Expect = 5.3
Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Query: 27 IIVGAGVGGCVVAHRLSEVPS---WKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
I+G G G +A L +V+ + + +S++ G K
Sbjct: 41 TIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVK 99
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 25.9 bits (56), Expect = 6.1
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 24 YDFIIVGAGVGGCVVAHRLSEVPSWKVLLIEAGDEDRIFTDLVLISHYYQFTPYNWGFK 82
+I+G+G G A + + + +LI ++ T + ++ G
Sbjct: 6 SKLLILGSGPAGYTAAVYAARA-NLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPL 63
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 175
Score = 26.0 bits (56), Expect = 6.2
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 21 LDEYDFIIVGAGVGGCVVAH 40
L+ +++G G+GG ++ +
Sbjct: 1 LENAACVVIGTGIGGAMIIN 20
>d1woqa2 c.55.1.10 (A:140-263) Inorganic
polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter
sp. KM [TaxId: 184230]}
Length = 124
Score = 25.3 bits (55), Expect = 7.9
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 10/56 (17%)
Query: 103 GKGVGGSTIINGNIFTRG-------FPNDFNEWES---LGNTGWSFDDVLKYFKKF 148
G G+G + I +G + +D S G S+D+ +++
Sbjct: 11 GTGIGSAFIFDGKLVPNAELGHLEIDGHDAETKASAVARERDGLSWDEYSVLLQRY 66
>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007
{Vibrio cholerae [TaxId: 666]}
Length = 197
Score = 25.9 bits (56), Expect = 8.3
Identities = 5/26 (19%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 103 GKGVGGSTIINGNIFTRGFPNDFNEW 128
G+G +++G + +G + E
Sbjct: 11 HHGLGAGIVLDGRVL-QGRHGNIGEL 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.411
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,474,923
Number of extensions: 71776
Number of successful extensions: 320
Number of sequences better than 10.0: 1
Number of HSP's gapped: 301
Number of HSP's successfully gapped: 80
Length of query: 385
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 298
Effective length of database: 1,213,086
Effective search space: 361499628
Effective search space used: 361499628
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)