BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10418
(389 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O76878|RIPL_DROME RILP-like protein homolog OS=Drosophila melanogaster GN=CG11448
PE=2 SV=1
Length = 443
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 213/408 (52%), Gaps = 53/408 (12%)
Query: 9 LTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERENTKLQEL 68
+ V+DV+D+AS+IGKE+E+I+D++G DAV+ +MPK+I LE LE LA+KNEREN +QEL
Sbjct: 20 IGVVDVYDLASDIGKEYERIMDRFGTDAVSGLMPKIINTLELLEALATKNERENATIQEL 79
Query: 69 GDHISKLEHEKLER---------EVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEHE 119
D +++LE EKLE+ E+E IEE W+ ET +LV++V+ LQ+ENK+L K+ +
Sbjct: 80 RDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNELVDLVSSLQDENKRLVKQTQDL 139
Query: 120 GSSPMKSQQLSPEI-----------------DISVLQKLRGQVDSLRDQMRLKEKELGYR 162
SS +S L + D VLQ+L+ Q+ RD+++ +E+EL +
Sbjct: 140 QSSSAQSSGLGASLTESIISMTNHELHSALSDTQVLQRLKEQIYKQRDELKHRERELQDK 199
Query: 163 NSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFKMV 222
S++++ +I KA + D R + A++K + EER F +
Sbjct: 200 YSELEHLNIQAERLKAS-ERDTRRRHKLMQAQVKTLC--------------EERADF--L 242
Query: 223 NRLQEENKKLSKRLEHEGSSPMKSQQLSPEIDISALQKLRGQVDSLRDQMRLKEKELGYR 282
+LQ++++++++ + G + +++ L D GQ D R R +EL
Sbjct: 243 AQLQDQSREINQLRKRLGLAEKENEDLVASYD-------DGQNDPNRP--RYTTRELKEL 293
Query: 283 NSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVAALKQQL 342
S+ D L ID L + EL+ + + R ++
Sbjct: 294 ISERDELLTTIDTLNEQLAELKPPSQAKGKRQRHFSSSDDSDEDDDGHVADNDDDDDEEE 353
Query: 343 GLAEKENEDLYNSQETTSEEERPVQGPLPYEPDDAPWKK-SESGIRKL 389
AE + + ET + PVQGPLPYEPDDAPWKK SESGIRK
Sbjct: 354 AAAEANELEPPAAGETPPGHDAPVQGPLPYEPDDAPWKKSSESGIRKF 401
>sp|Q9JJC6|RIPL1_MOUSE RILP-like protein 1 OS=Mus musculus GN=Rilpl1 PE=1 SV=1
Length = 406
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 109/174 (62%), Gaps = 14/174 (8%)
Query: 7 STLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERENTKLQ 66
+ LTV+DV+DIAS +G EFE++IDQ+G +++ +MPKV+ LE LE L S++ +L
Sbjct: 20 AELTVMDVYDIASLVGHEFERVIDQHGCESIARLMPKVVRVLEILEVLVSRHHV-APELD 78
Query: 67 ELGDHISKLEHEKLER---------EVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLE 117
EL + +L E+++R E+E +E+ W+ E Q L+ + +LQEENK+L L
Sbjct: 79 ELRLELDRLRVERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLN 138
Query: 118 HE--GSS--PMKSQQLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVD 167
H+ G S + Q+ E + V+++L+ VD RD++R K++ELG +N DV+
Sbjct: 139 HKDVGFSEEEFQKQEGMSERERQVMKRLKEVVDKQRDELRAKDRELGLKNEDVE 192
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 214 EERQCFKMVNRLQEENKKLSKRLEHE--GSSP--MKSQQLSPEIDISALQKLRGQVDSLR 269
E + + +LQEENK+L L H+ G S + Q+ E + +++L+ VD R
Sbjct: 115 EAQDLLSQIAQLQEENKQLMTNLNHKDVGFSEEEFQKQEGMSERERQVMKRLKEVVDKQR 174
Query: 270 DQMRLKEKELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQ 329
D++R K++ELG +N DV+ L++Q RL +LR + + + Q + LI+++ + A LQ
Sbjct: 175 DELRAKDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQ 234
Query: 330 DHQREVAALKQQLGLAEKENEDLYNSQETTSEEERPVQGPLP 371
++E+ +L+ +LG K E L EEE P P
Sbjct: 235 TKEQEMGSLRAELG---KLRERLQGEHSQNGEEEEAEIQPQP 273
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 175 SNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFKMVNRLQEENK 230
+ KA DL DPNRPRFT EL+++LH+RN LK+++ L+EE +K ++EEN+
Sbjct: 282 AEKAALDLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYK-SEEIEEENR 336
>sp|Q5EBL4|RIPL1_HUMAN RILP-like protein 1 OS=Homo sapiens GN=RILPL1 PE=1 SV=1
Length = 403
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 104/173 (60%), Gaps = 12/173 (6%)
Query: 7 STLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNE------- 59
+ LTV+DV+DIAS +G EFE++IDQ+G +A+ +MPKV+ LE LE L S++
Sbjct: 20 AELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVRVLEILEVLVSRHHVAPELDE 79
Query: 60 RENTKLQELGDHISKLEHE-KLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEH 118
+ + + ++E E K ++E+E +E+ W+ E Q L+ + +LQEENK+L L H
Sbjct: 80 LRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLSH 139
Query: 119 E----GSSPMKSQQLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVD 167
+ + + E + V++KL+ VD RD++R K++ELG +N DV+
Sbjct: 140 KDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDRELGLKNEDVE 192
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 222 VNRLQEENKKLSKRLEHE----GSSPMKSQQLSPEIDISALQKLRGQVDSLRDQMRLKEK 277
+ +LQEENK+L L H+ + + E + ++KL+ VD RD++R K++
Sbjct: 123 IAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDR 182
Query: 278 ELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVAA 337
ELG +N DV+ L++Q RL +LR + + + Q + LI+++ + A LQ ++E+ +
Sbjct: 183 ELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGS 242
Query: 338 LKQQLG 343
L+ +LG
Sbjct: 243 LRAELG 248
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 141 LRGQVDSLRDQMRLKEKELGYRNSD---VDNSDIPDLSNKAVYDLDDPNRPRFTTAELKE 197
LR ++ LR++++ + + G + V I D + K DL DPNRPRFT EL++
Sbjct: 243 LRAELGKLRERLQGEHSQNGEEEPETEPVGEESISD-AEKVAMDLKDPNRPRFTLQELRD 301
Query: 198 ILHDRNTLKTRLNELEEERQCFKMVNRLQEENK 230
+LH+RN LK+++ L+EE +K ++EEN+
Sbjct: 302 VLHERNELKSKVFLLQEELAYYK-SEEMEEENR 333
>sp|D3ZUQ0|RIPL1_RAT RILP-like protein 1 OS=Rattus norvegicus GN=Rilpl1 PE=1 SV=1
Length = 406
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 108/174 (62%), Gaps = 14/174 (8%)
Query: 7 STLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERENTKLQ 66
+ LTV+DV+DIAS +G EFE++IDQ+G +A+ +MPKV+ LE LE L S++ +L
Sbjct: 20 AELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVRVLEILEVLVSRHHV-APELD 78
Query: 67 ELGDHISKLEHEKLER---------EVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLE 117
EL + +L E+++R E+E +E+ W+ E Q L+ + +LQEENK+L L
Sbjct: 79 ELRLELDRLRVERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLN 138
Query: 118 HE--GSS--PMKSQQLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVD 167
H+ G S ++ + E + V+++L+ VD RD++R K++EL +N DV+
Sbjct: 139 HKDVGFSEEELQKHEGMSERERQVMKRLKEVVDKQRDEIRAKDRELVLKNEDVE 192
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 214 EERQCFKMVNRLQEENKKLSKRLEHE--GSSP--MKSQQLSPEIDISALQKLRGQVDSLR 269
E + + +LQEENK+L L H+ G S ++ + E + +++L+ VD R
Sbjct: 115 EAQDLLSQIAQLQEENKQLMTNLNHKDVGFSEEELQKHEGMSERERQVMKRLKEVVDKQR 174
Query: 270 DQMRLKEKELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQ 329
D++R K++EL +N DV+ L++Q RL +LR + + + Q + LI+++ + A LQ
Sbjct: 175 DEIRAKDRELVLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQ 234
Query: 330 DHQREVAALKQQLGLAEKENEDLYNSQETTSEEERPVQGPLPYEPD 375
++E+ +L+ +LG K E L EEE + +P +PD
Sbjct: 235 TKEQEMGSLRAELG---KLRERLQGEHSQNGEEE---EAEIPPQPD 274
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 14/99 (14%)
Query: 141 LRGQVDSLRDQMRLKEKELGYRNSDVDNSDIPDL---------SNKAVYDLDDPNRPRFT 191
LR ++ LR++++ + + N + + ++IP + KA DL DPNRPRFT
Sbjct: 243 LRAELGKLRERLQGEHSQ----NGEEEEAEIPPQPDGEESISDAEKAALDLKDPNRPRFT 298
Query: 192 TAELKEILHDRNTLKTRLNELEEERQCFKMVNRLQEENK 230
EL+++LH+RN LK+++ L+EE +K ++EEN+
Sbjct: 299 LQELRDVLHERNELKSKVFLLQEELAYYKS-EEIEEENR 336
>sp|Q17QG3|RIPL1_BOVIN RILP-like protein 1 OS=Bos taurus GN=RILPL1 PE=2 SV=1
Length = 403
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 105/173 (60%), Gaps = 12/173 (6%)
Query: 7 STLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNE------- 59
+ LTV+DV+DIAS +G EFE++IDQ+G +A+ ++PKV+ LE LE L S++
Sbjct: 20 AELTVMDVYDIASLVGHEFERVIDQHGCEAIARLIPKVVRVLEILEVLVSRHHVAPELDE 79
Query: 60 RENTKLQELGDHISKLEHE-KLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEH 118
+ + + ++E E K ++E+E +E+ W+ E Q L+ + +LQEENK+L L H
Sbjct: 80 LRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLSH 139
Query: 119 EGSS----PMKSQQLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVD 167
+ S + + E + V++KL+ VD RD++R K++ELG +N DV+
Sbjct: 140 KDVSFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDRELGLKNEDVE 192
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 222 VNRLQEENKKLSKRLEHEGSS----PMKSQQLSPEIDISALQKLRGQVDSLRDQMRLKEK 277
+ +LQEENK+L L H+ S + + E + ++KL+ VD RD++R K++
Sbjct: 123 IAQLQEENKQLMTNLSHKDVSFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDR 182
Query: 278 ELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVAA 337
ELG +N DV+ L++Q RL +LR + + + Q + LI+++ + A LQ ++E+ +
Sbjct: 183 ELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGS 242
Query: 338 LKQQLG 343
L+ +LG
Sbjct: 243 LRAELG 248
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 138 LQKLRGQVDSLRDQM-RLKEKELGYRNSDVDNSDIPDLSN--------KAVYDLDDPNRP 188
LQ ++ SLR ++ +L+E+ G N + + + +L K DL DPNRP
Sbjct: 233 LQTKEQEMGSLRAELGKLRERLQGELNQNGEEEPVAELGGEECVSEAEKVAMDLKDPNRP 292
Query: 189 RFTTAELKEILHDRNTLKTRLNELEEERQCFKMVNRLQEENK 230
RFT EL+++LH+RN LK+++ L+EE +K ++EEN+
Sbjct: 293 RFTLQELRDVLHERNELKSKVFLLQEELAYYKS-EEIEEENQ 333
>sp|A0PJP4|RIPL1_XENTR RILP-like protein 1 OS=Xenopus tropicalis GN=rilpl1 PE=2 SV=1
Length = 394
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 30/182 (16%)
Query: 7 STLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNE------- 59
+ LTV+DV+DIAS +G+EFE++IDQYG + + +MPKV+ LE LE L S+N
Sbjct: 12 AELTVMDVYDIASAVGQEFERVIDQYGCEVIGRLMPKVVRVLEILEVLVSRNHINPEMEE 71
Query: 60 RENTKLQELGDHISKLEHE-KLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRL-- 116
+ + + ++E E K ++E+E +E+ W+ E Q L+ + +LQEENK+L L
Sbjct: 72 LRLELDRLRLERMDRIEKEKKHQKELELVEDVWRGEAQDLLNQIAQLQEENKQLVSNLSQ 131
Query: 117 -----------EHEGSSPMKSQQLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSD 165
+HEG S + Q V++KL+ VD RD++R K++EL +N D
Sbjct: 132 KDINLTEEEFQKHEGMSERERQ---------VMKKLKEVVDKQRDEIRAKDRELVLKNED 182
Query: 166 VD 167
V+
Sbjct: 183 VE 184
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 25/154 (16%)
Query: 222 VNRLQEENKKLSKRL-------------EHEGSSPMKSQQLSPEIDISALQKLRGQVDSL 268
+ +LQEENK+L L +HEG S + Q ++KL+ VD
Sbjct: 115 IAQLQEENKQLVSNLSQKDINLTEEEFQKHEGMSERERQ---------VMKKLKEVVDKQ 165
Query: 269 RDQMRLKEKELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAAL 328
RD++R K++EL +N DV+ L++Q RL +LR + + + Q + LI+++ + A L
Sbjct: 166 RDEIRAKDRELVLKNEDVEALQQQQSRLMKINHDLRHRVTVVEAQGKALIEQKVELEAYL 225
Query: 329 QDHQREVAALKQQLGLAEKENEDLYNSQETTSEE 362
Q ++E A+++ ++G K + L Q T EE
Sbjct: 226 QTKEQEAASMRLEIG---KLRDKLKGEQHTNGEE 256
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 141 LRGQVDSLRDQMRLKEKELG--YRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEI 198
+R ++ LRD+++ ++ G + ++ I + + K DL D NRPRFT EL+++
Sbjct: 235 MRLEIGKLRDKLKGEQHTNGEEIKTETLNEESILE-TEKLSLDLKDSNRPRFTLQELRDV 293
Query: 199 LHDRNTLKTRLNELEEERQCFK 220
LH+RN LK ++ L+EE +K
Sbjct: 294 LHERNELKAKVFMLQEELAYYK 315
>sp|Q0IHE5|RIPL1_XENLA RILP-like protein 1 OS=Xenopus laevis GN=rilpl1 PE=2 SV=1
Length = 394
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 104/173 (60%), Gaps = 12/173 (6%)
Query: 7 STLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNE------- 59
+ LTV+DV+DIAS +G+EFE++IDQYG + + +MPKV+ LE LE L S+N
Sbjct: 12 AELTVMDVYDIASAVGQEFERVIDQYGCEVIGRLMPKVVRVLEILEVLVSRNHINPEMEE 71
Query: 60 RENTKLQELGDHISKLEHEKLE-REVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEH 118
+ + + ++E EK +E+E +E+ W+ E Q L+ +++LQEENK+L L H
Sbjct: 72 LRLELDRLRLERMDRIEKEKKHLKELELVEDVWRGEAQDLLNQISQLQEENKQLLTNLSH 131
Query: 119 EGSS----PMKSQQLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVD 167
+ + + + E + V++KL+ VD RD++R +++EL +N DV+
Sbjct: 132 KDVNLTEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRARDRELVLKNEDVE 184
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 222 VNRLQEENKKLSKRLEHEGSS----PMKSQQLSPEIDISALQKLRGQVDSLRDQMRLKEK 277
+++LQEENK+L L H+ + + + E + ++KL+ VD RD++R +++
Sbjct: 115 ISQLQEENKQLLTNLSHKDVNLTEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRARDR 174
Query: 278 ELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVAA 337
EL +N DV+ L++Q RL +LR + + + Q + LI+++ + A LQ ++E A+
Sbjct: 175 ELVLKNEDVEALQQQQSRLIKINHDLRHRVTVVEAQGKALIEQKVELEAYLQTKEQEAAS 234
Query: 338 LKQQLG 343
++ ++G
Sbjct: 235 MRIEIG 240
>sp|A0PJT0|RIPL1_DANRE RILP-like protein 1 OS=Danio rerio GN=rilpl1 PE=2 SV=2
Length = 406
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 3 DEYSSTLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKN---- 58
D+ ++ L+V+DV+DIA+ +G E E++I++ G + ++ ++P+V+ LE LE L S++
Sbjct: 11 DKSAAELSVMDVYDIAAALGLELERVIERTGAELLSRLVPRVVRVLELLEVLVSRSSSSP 70
Query: 59 ----ERENTKLQELGDHISKLEHEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSK 114
R L + +K ++E+E +E+ W+ E Q L+ +++LQEENK L
Sbjct: 71 DTDELRLELDRLRLERLERLEKEKKHKKELELVEDVWRGEAQDLLCQISQLQEENKTLLN 130
Query: 115 RLEHEGSSPMKSQQLSPEIDIS-----VLQKLRGQVDSLRDQMRLKEKELGYRNSDVDNS 169
L SP+ + + + ++ V++KL+ VD RD++R K++EL +N DV+
Sbjct: 131 NLSIR-ESPLTEEDIQKQEGMTERERQVMKKLKEVVDKQRDEIRAKDRELTLKNDDVEAL 189
Query: 170 DIPDLSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFKM-VNRLQEE 228
+S + D +R A+ K ++ + L+ ++E + V+RL+E+
Sbjct: 190 Q-QQMSRLMKINQDVRHRVSVVEAQGKSLIQQKVELEAAAQTQQQEVSSLRQEVSRLKEK 248
Query: 229 NKKLSKRLEHEGSSPM 244
K+ S+ E E P+
Sbjct: 249 LKEQSRSNEEEAQEPV 264
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 222 VNRLQEENKKLSKRLEHEGSSPMKSQQLSPEIDIS-----ALQKLRGQVDSLRDQMRLKE 276
+++LQEENK L L SP+ + + + ++ ++KL+ VD RD++R K+
Sbjct: 118 ISQLQEENKTLLNNLSIR-ESPLTEEDIQKQEGMTERERQVMKKLKEVVDKQRDEIRAKD 176
Query: 277 KELGYRNSDVDNLKRQIDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVA 336
+EL +N DV+ L++Q+ RL +++R + + + Q + LI ++ + AA Q Q+EV+
Sbjct: 177 RELTLKNDDVEALQQQMSRLMKINQDVRHRVSVVEAQGKSLIQQKVELEAAAQTQQQEVS 236
Query: 337 ALKQQLG-LAEKENEDLYNSQETTSEEERPVQGPLPYE 373
+L+Q++ L EK E +++E E + PV P P +
Sbjct: 237 SLRQEVSRLKEKLKEQSRSNEE---EAQEPVGPPSPAQ 271
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 178 AVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFK 220
+ DL DPNRPRFT EL+++LH+RN LK ++ L+EE ++
Sbjct: 280 STVDLKDPNRPRFTLQELRDVLHERNELKAKVFMLQEEIAYYR 322
>sp|Q6AYA0|RIPL2_RAT RILP-like protein 2 OS=Rattus norvegicus GN=Rilpl2 PE=1 SV=1
Length = 197
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 154 LKEKELGYRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELE 213
LK++ G R + V S++ +K V DL DPNRPRFT EL+++L +RN LK++L ++
Sbjct: 86 LKQEVEGLRRAGVSGSEVNLGPDKMVVDLTDPNRPRFTLQELRDVLQERNKLKSQLLLVQ 145
Query: 214 EERQCFK 220
EE QC++
Sbjct: 146 EELQCYR 152
>sp|Q99LE1|RIPL2_MOUSE RILP-like protein 2 OS=Mus musculus GN=Rilpl2 PE=2 SV=1
Length = 197
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 154 LKEKELGYRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELE 213
LK++ G R + V + + +K V DL DPNRPRFT EL+E+L +RN LK++L ++
Sbjct: 86 LKQEVEGLRKAGVSGAQVNLGPDKMVVDLTDPNRPRFTLQELREVLQERNKLKSQLLLVQ 145
Query: 214 EERQCFK 220
EE QC++
Sbjct: 146 EELQCYR 152
>sp|Q969X0|RIPL2_HUMAN RILP-like protein 2 OS=Homo sapiens GN=RILPL2 PE=1 SV=1
Length = 211
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 149 RDQMRLKEKELGYRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTR 208
RD +R KE E R S + ++ NK V DL DPNRPRFT EL+++L +RN LK++
Sbjct: 93 RDHLR-KEVEGLRRQSPPASGEVNLGPNKMVVDLTDPNRPRFTLQELRDVLQERNKLKSQ 151
Query: 209 LNELEEERQCFK 220
L ++EE QC+K
Sbjct: 152 LLVVQEELQCYK 163
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 9 LTVIDVFDIASEIGKEFEKIIDQYGPDA-VTSIMPKVIVALEHLECLASKNERENTKLQE 67
LT DV+DI+ +G+E + G D VT + KV+ LE LE L ++ + L+E
Sbjct: 36 LTAEDVYDISYLLGRELMAL----GSDPRVTQLQFKVVRVLEMLEALVNEG---SLALEE 88
Query: 68 LGDHISKLEHEKLEREVEEI 87
L K+E + L +EVE +
Sbjct: 89 L-----KMERDHLRKEVEGL 103
>sp|A4IFK7|RIPL2_BOVIN RILP-like protein 2 OS=Bos taurus GN=RILPL2 PE=2 SV=1
Length = 206
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 149 RDQMRLKEKELGYRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTR 208
RD +R KE E R ++ +K V DL DPNRPRFT EL+++L +RN LK++
Sbjct: 88 RDNLR-KEVEGLRREGSAAGPEVNLGPDKMVVDLTDPNRPRFTLQELRDVLQERNKLKSQ 146
Query: 209 LNELEEERQCFK 220
L ++EE QC+K
Sbjct: 147 LLVVQEELQCYK 158
>sp|A4IGC3|RIPL2_DANRE RILP-like protein 2 OS=Danio rerio GN=rilpl2 PE=2 SV=2
Length = 195
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 138 LQKLRGQVDSLRDQMRLKEKELGYRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKE 197
L++LR ++D++R + ++ + +S N+ P NK V DL DPNRPRFT ELKE
Sbjct: 72 LEELRMEMDNMRTE---TDRVVAEGSSGNINTVGP---NKLVVDLKDPNRPRFTMQELKE 125
Query: 198 ILHDRNTLKTRLNELEEERQCFK 220
+L +RN LK +L +EE Q +K
Sbjct: 126 VLQERNKLKAQLLVAQEELQLYK 148
>sp|Q0P4J3|RIPL2_XENTR RILP-like protein 2 OS=Xenopus tropicalis GN=rilpl2 PE=2 SV=1
Length = 201
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 176 NKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFK 220
+K V DL DPNRPRFT EL+++L +RN LK +L ++E QC+K
Sbjct: 110 DKMVIDLTDPNRPRFTLQELRDVLQERNKLKVKLLVAQDELQCYK 154
>sp|Q6IP02|RIPL2_XENLA RILP-like protein 2 OS=Xenopus laevis GN=rilpl2 PE=2 SV=2
Length = 201
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 176 NKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFK 220
+K V DL DPNRPRFT EL+++L +RN LK +L ++E QC+K
Sbjct: 110 DKMVIDLTDPNRPRFTLQELRDVLQERNKLKVQLLVAQDELQCYK 154
>sp|Q5ND29|RILP_MOUSE Rab-interacting lysosomal protein OS=Mus musculus GN=Rilp PE=1 SV=1
Length = 369
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 14 VFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERENTKL--QELGDH 71
V+ +A +G E + + ++GPDA ++P V+ ALE LE A ++ ++ Q+
Sbjct: 27 VYHLAGALGTELQGLARRFGPDAAAGLVPLVVRALELLEKAAVGPAPDSLQVSAQQAEVE 86
Query: 72 ISKL--EHEKLEREVEEIEESWKEETQQLVEMVNR----LQEENKKLSKRLEHEGSSPMK 125
+ +L E+++L +E+ + + +QL E+ +R L+ N+ L +R E + +
Sbjct: 87 LRRLREENQRLRQELGSGPQEERALLRQLKEVTDRQRDELRAHNRDLQRR-SQETEALQE 145
Query: 126 SQQLSPEIDISVLQKLRGQVDSLR-DQMRLKEKELGYRNS-----------DVDNSDIPD 173
Q I+ + KL LR Q R +E+++ S D SD P
Sbjct: 146 QLQRLLLINSELRHKLAAVQTQLRAAQDRERERQIAQDGSSQLAKEQSLEPDAATSDDPV 205
Query: 174 LSNKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFK 220
+ K +L + + F+ ELK+IL +RN LK + L+EE F+
Sbjct: 206 DTQKQPGNLPEAVQCGFSREELKQILQERNELKANVFLLKEELAYFQ 252
>sp|Q29EP6|JIP3_DROPS JNK-interacting protein 3 OS=Drosophila pseudoobscura pseudoobscura
GN=syd PE=3 SV=2
Length = 1235
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 17 IASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERENTKLQELGDHISKLE 76
+A I +EFE++I++Y D V ++MP ++ LE L+ N+ ++ +L+ L + +
Sbjct: 45 LAGSIYQEFERMINRYDEDVVKNLMPLLVNVLECLDASYRINQEQDVELELL-----RED 99
Query: 77 HEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLE 117
+E+L + E + + K+ Q+L+E + ++ENK+L+ RLE
Sbjct: 100 NEQLVTQYEREKSARKQSEQKLLEAEDLAEQENKELATRLE 140
>sp|Q9GQF1|JIP3_DROME JNK-interacting protein 3 OS=Drosophila melanogaster GN=syd PE=1
SV=1
Length = 1227
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 17 IASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERENTKLQELGDHISKLE 76
+A I +EFE++I++Y D V ++MP ++ LE L+ N+ ++ +++ L + +
Sbjct: 45 LAGSIYQEFERMINRYDEDVVKNLMPLLVNVLECLDASYRINQEQDVEVELL-----RED 99
Query: 77 HEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLE 117
+E+L + E + + K+ Q+L+E + ++ENK+L+ RLE
Sbjct: 100 NEQLVTQYEREKSARKQSEQKLLEAEDLAEQENKELATRLE 140
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 140 KLRGQVDSLRDQMRLKEKELGYRNSDVDNSDIPDLSNKAVYDLDDPNRPRFTTAELKEIL 199
KLR ++ L D+++ ++++ +N++ + +D+P R RFT E+ +L
Sbjct: 417 KLRQRISELEDELKKAKEQVKQQNTEQEENDVPL-----------AQRKRFTRVEMAMVL 465
Query: 200 HDRNTLKTRLNELEE 214
+RN K RL EL+E
Sbjct: 466 MERNQYKERLMELQE 480
>sp|Q9ESN9|JIP3_MOUSE C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus
GN=Mapk8ip3 PE=1 SV=1
Length = 1337
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 2 DDEYSSTLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERE 61
DD S ++ V +A I +EFE++I Y + V +MP V+ LE+L+ + S+N+
Sbjct: 17 DDYCSGSVMSERVSGLAGSIYREFERLIHCYDEEVVKELMPLVVNVLENLDSVLSENQEH 76
Query: 62 NTKLQELGDHISKLEHEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEH 118
+L+ L + ++E+L + E + K+ ++ +E + L++E K+L ++EH
Sbjct: 77 EVELELL-----REDNEQLLTQYEREKALRKQAEEKFIEFEDALEQEKKELQIQVEH 128
>sp|Q9UPT6|JIP3_HUMAN C-Jun-amino-terminal kinase-interacting protein 3 OS=Homo sapiens
GN=MAPK8IP3 PE=1 SV=3
Length = 1336
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 2 DDEYSSTLTVIDVFDIASEIGKEFEKIIDQYGPDAVTSIMPKVIVALEHLECLASKNERE 61
DD S ++ V +A I +EFE++I Y + V +MP V+ LE+L+ + S+N+
Sbjct: 17 DDYCSGSVMSERVSGLAGSIYREFERLIHCYDEEVVKELMPLVVNVLENLDSVLSENQEH 76
Query: 62 NTKLQELGDH----ISKLEHEK-LEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRL 116
+L+ L + +++ E EK L R+ EE + +E + L++E K+L ++
Sbjct: 77 EVELELLREDNEQLLTQYEREKALRRQAEE----------KFIEFEDALEQEKKELQIQV 126
Query: 117 EH 118
EH
Sbjct: 127 EH 128
>sp|Q9Z1Z0|USO1_MOUSE General vesicular transport factor p115 OS=Mus musculus GN=Uso1
PE=1 SV=2
Length = 959
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 139/288 (48%), Gaps = 28/288 (9%)
Query: 61 ENTKLQELGDHISKLEHEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEHEG 120
++ +L+EL +S L+ + E+++ + ++ Q+ + ++ +L K H+G
Sbjct: 662 QDLQLEELKQQVSTLKCQN-----EQLQTAVTQQASQIQQHKDQYNLLKVQLGKDNHHQG 716
Query: 121 SSPMKSQ--QLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVDN---SDIPDLS 175
S +Q + PE +IS +LR +++ L+ Q L + +L ++S ++N S +S
Sbjct: 717 SHGDGAQVNGIQPE-EIS---RLREEIEELKSQQALLQGQLAEKDSLIENLKSSQASGMS 772
Query: 176 NKAVYDLDDPNRPRFTTAELKEILHDRNTLKTRLNELEEERQCFKMVNRLQEENKKLSKR 235
+A P R AELK+ + LK++L E + RLQ EN +L +R
Sbjct: 773 EQA--SATCPPRDPEQVAELKQ---ELTALKSQLCSQSLE------ITRLQTENCELLQR 821
Query: 236 LEHEGSS-PMKSQQLSPEIDISALQKLRGQVDSLRDQMRLKEKELGYRNSDVDNLKRQID 294
E S P++ + S + + + G++ +L + + + E+ + + +++Q+D
Sbjct: 822 AETLAKSVPVEGE--SEHVSAAKTTDVEGRLSALLQETKELKNEIKALSEERTAIQKQLD 879
Query: 295 RLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVAALKQQL 342
ST+ L+ ++ ++V E+ D L L D +++ +LK +L
Sbjct: 880 SSNSTIAILQTEKDKLDLEVTDSKKEQDDLLVLLADQDQKILSLKSKL 927
>sp|P41542|USO1_RAT General vesicular transport factor p115 OS=Rattus norvegicus
GN=Uso1 PE=1 SV=1
Length = 959
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 141/290 (48%), Gaps = 32/290 (11%)
Query: 61 ENTKLQELGDHISKLEHEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEHEG 120
++ +L+EL +S L+ + E+++ + ++ Q+ + ++ +L K H+G
Sbjct: 662 QDLQLEELKQQVSTLKCQN-----EQLQTAVTQQASQIQQHKDQYNLLKVQLGKDNHHQG 716
Query: 121 SSPMKSQ--QLSPEIDISVLQKLRGQVDSLRDQMRLKEKELGYRNSDVDN---SDIPDLS 175
S +Q + PE +IS +LR +++ LR L + +L +++ ++N S + +S
Sbjct: 717 SHSDGAQVNGIQPE-EIS---RLREEIEELRSHQVLLQSQLAEKDTVIENLRSSQVSGMS 772
Query: 176 NKAVYDLDDPNRPRFT--TAELKEILHDRNTLKTRLNELEEERQCFKMVNRLQEENKKLS 233
+A+ PR AELK+ + + LK++L E + RLQ EN +L
Sbjct: 773 EQALATCS----PRDAEQVAELKQ---ELSALKSQLCSQSLE------ITRLQTENSELQ 819
Query: 234 KRLEHEGSS-PMKSQQLSPEIDISALQKLRGQVDSLRDQMRLKEKELGYRNSDVDNLKRQ 292
+R E S P++ + S + + + G++ +L + + + E+ + + +++Q
Sbjct: 820 QRAETLAKSVPVEGE--SELVTAAKTTDVEGRLSALLQETKELKNEIKALSEERTAIQKQ 877
Query: 293 IDRLTSTVRELRRKQRLSQVQVRGLIDERADFLAALQDHQREVAALKQQL 342
+D ST+ L+ ++ ++V E+ D L L D +++ +LK +L
Sbjct: 878 LDSSNSTIAILQTEKDKLYLEVTDSKKEQDDLLVLLADQDQKILSLKSKL 927
>sp|O44199|RAD50_CAEEL DNA repair protein rad-50 OS=Caenorhabditis elegans GN=rad-50 PE=2
SV=1
Length = 1298
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 63 TKLQELGDHISKLEHEKLEREVEEIEESWKEETQQLVEMVNRLQEENKKLSKRLEHEGSS 122
T+ +EL +SKLE E++ + E E Q++V+ + ++E+N+KLS + E S+
Sbjct: 695 TEQEELEKLVSKLEKEEI---IIVKAEGQANELQRIVKELKEVREKNRKLSTEMAEEKSN 751
Query: 123 PMKSQQLSPEIDISV-----LQKLRGQVDSLRDQMRLKEKELGYRNSDVDNSDIPDLS-- 175
K+++ ++ + LQ G + L +Q EK S+ D+SD +
Sbjct: 752 LSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKRYEQLVSESDSSDGLSYTEL 811
Query: 176 NKAVYDLDDPNRPRFTTA-ELKEILHDRNTLKTRLNELEEER 216
K V D D+ R EL++ +RN L+++LNEL R
Sbjct: 812 RKKVEDKDEEYRKIVQEGEELQKCSEERNKLQSKLNELGTHR 853
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,239,515
Number of Sequences: 539616
Number of extensions: 5997618
Number of successful extensions: 43878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 2477
Number of HSP's that attempted gapping in prelim test: 35202
Number of HSP's gapped (non-prelim): 7898
length of query: 389
length of database: 191,569,459
effective HSP length: 119
effective length of query: 270
effective length of database: 127,355,155
effective search space: 34385891850
effective search space used: 34385891850
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)