Query psy1042
Match_columns 567
No_of_seqs 372 out of 2520
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 17:26:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 1.1E-71 3.8E-76 611.4 32.0 427 117-567 2-462 (566)
2 3q9t_A Choline dehydrogenase a 100.0 2E-66 6.9E-71 571.0 28.7 423 116-567 5-470 (577)
3 3qvp_A Glucose oxidase; oxidor 100.0 2.8E-66 9.7E-71 569.3 28.1 427 114-567 16-474 (583)
4 1gpe_A Protein (glucose oxidas 100.0 4.6E-60 1.6E-64 523.8 24.8 429 116-567 23-478 (587)
5 3t37_A Probable dehydrogenase; 100.0 4.3E-58 1.5E-62 503.6 34.6 404 115-567 15-424 (526)
6 2jbv_A Choline oxidase; alcoho 100.0 9.1E-58 3.1E-62 501.9 35.2 404 116-567 12-427 (546)
7 1ju2_A HydroxynitrIle lyase; f 100.0 1.9E-49 6.5E-54 434.8 17.8 371 115-567 24-409 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 1.7E-45 5.8E-50 405.3 25.7 404 116-567 6-446 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 2.4E-42 8.2E-47 376.2 27.6 368 116-567 4-415 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 8.9E-41 3.1E-45 364.0 26.8 366 115-567 9-420 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.5E-28 5.1E-33 273.2 23.1 322 73-433 2-371 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.7 2.3E-15 8E-20 163.7 19.5 66 318-390 205-271 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.5 3.9E-13 1.3E-17 148.0 15.8 60 320-387 255-315 (566)
14 1y0p_A Fumarate reductase flav 99.4 9.6E-13 3.3E-17 145.1 16.2 60 319-386 259-319 (571)
15 2h88_A Succinate dehydrogenase 99.3 3.5E-11 1.2E-15 133.2 19.3 56 321-385 161-218 (621)
16 2wdq_A Succinate dehydrogenase 99.3 4.4E-11 1.5E-15 132.0 19.3 57 321-385 149-207 (588)
17 2bs2_A Quinol-fumarate reducta 99.3 3E-11 1E-15 134.6 17.8 50 328-385 170-221 (660)
18 1d4d_A Flavocytochrome C fumar 99.3 5.4E-11 1.8E-15 131.0 19.1 63 320-390 260-324 (572)
19 3dme_A Conserved exported prot 99.3 5.5E-12 1.9E-16 130.2 10.6 64 321-395 156-220 (369)
20 1chu_A Protein (L-aspartate ox 99.3 6.1E-11 2.1E-15 129.6 17.4 52 328-385 151-209 (540)
21 1y56_B Sarcosine oxidase; dehy 99.3 1.6E-11 5.5E-16 127.9 11.1 61 321-395 155-215 (382)
22 3nyc_A D-arginine dehydrogenas 99.2 2.5E-11 8.6E-16 126.0 12.5 35 116-152 8-42 (381)
23 2gag_B Heterotetrameric sarcos 99.2 5.5E-11 1.9E-15 124.6 14.5 61 321-395 180-240 (405)
24 3gyx_A Adenylylsulfate reducta 99.2 4.6E-11 1.6E-15 133.1 13.1 50 330-385 182-234 (662)
25 2oln_A NIKD protein; flavoprot 99.2 3.3E-10 1.1E-14 118.6 18.3 36 116-152 3-38 (397)
26 1kf6_A Fumarate reductase flav 99.2 6.3E-10 2.2E-14 123.0 20.2 51 328-386 146-199 (602)
27 1jnr_A Adenylylsulfate reducta 99.2 1.5E-10 5.3E-15 129.0 15.2 59 320-385 156-219 (643)
28 3dje_A Fructosyl amine: oxygen 99.2 1E-10 3.6E-15 124.2 12.4 38 115-153 4-42 (438)
29 2rgh_A Alpha-glycerophosphate 99.2 7.1E-10 2.4E-14 122.0 19.0 58 328-394 200-259 (571)
30 1pj5_A N,N-dimethylglycine oxi 99.2 1.7E-10 5.9E-15 132.6 14.4 60 321-394 157-216 (830)
31 3da1_A Glycerol-3-phosphate de 99.1 4.4E-10 1.5E-14 123.4 16.0 59 328-395 182-242 (561)
32 2i0z_A NAD(FAD)-utilizing dehy 99.1 9.1E-11 3.1E-15 125.3 9.9 55 320-386 139-193 (447)
33 3axb_A Putative oxidoreductase 99.1 1.7E-10 5.8E-15 123.0 10.1 34 116-150 22-56 (448)
34 2gf3_A MSOX, monomeric sarcosi 99.1 2.4E-09 8.3E-14 111.4 17.8 35 117-152 3-37 (389)
35 3ps9_A TRNA 5-methylaminomethy 99.1 5.5E-10 1.9E-14 125.5 13.0 36 116-152 271-306 (676)
36 3oz2_A Digeranylgeranylglycero 99.0 3.1E-09 1E-13 110.4 15.5 59 318-386 105-163 (397)
37 3pvc_A TRNA 5-methylaminomethy 99.0 5.7E-10 2E-14 125.6 10.1 36 116-152 263-298 (689)
38 1rp0_A ARA6, thiazole biosynth 99.0 2.5E-09 8.6E-14 107.0 13.4 37 116-152 38-74 (284)
39 1ryi_A Glycine oxidase; flavop 99.0 1.6E-10 5.5E-15 120.2 4.7 37 115-152 15-51 (382)
40 3jsk_A Cypbp37 protein; octame 99.0 5.3E-09 1.8E-13 106.6 14.3 37 116-152 78-115 (344)
41 3v76_A Flavoprotein; structura 99.0 4.5E-09 1.5E-13 111.0 14.0 38 115-153 25-62 (417)
42 2uzz_A N-methyl-L-tryptophan o 99.0 9.1E-09 3.1E-13 106.4 16.1 35 117-152 2-36 (372)
43 2qcu_A Aerobic glycerol-3-phos 99.0 8.5E-09 2.9E-13 111.6 16.4 53 328-390 161-215 (501)
44 2e5v_A L-aspartate oxidase; ar 98.9 9.1E-09 3.1E-13 110.5 15.2 31 119-150 1-31 (472)
45 3cgv_A Geranylgeranyl reductas 98.9 1E-08 3.5E-13 106.9 15.1 67 319-396 106-172 (397)
46 3nlc_A Uncharacterized protein 98.9 4.1E-09 1.4E-13 114.7 11.8 36 116-152 106-141 (549)
47 3ka7_A Oxidoreductase; structu 98.9 6.3E-09 2.1E-13 109.7 11.5 57 321-390 202-258 (425)
48 2zxi_A TRNA uridine 5-carboxym 98.8 5.1E-09 1.7E-13 114.7 8.2 35 116-151 26-60 (637)
49 3ces_A MNMG, tRNA uridine 5-ca 98.8 4.7E-09 1.6E-13 115.4 7.3 35 116-151 27-61 (651)
50 2gqf_A Hypothetical protein HI 98.8 5E-08 1.7E-12 102.4 15.0 36 117-153 4-39 (401)
51 4dgk_A Phytoene dehydrogenase; 98.8 1.8E-08 6.3E-13 108.6 11.6 58 321-390 227-284 (501)
52 3atr_A Conserved archaeal prot 98.8 3.4E-08 1.2E-12 105.4 13.6 57 319-384 104-162 (453)
53 3e1t_A Halogenase; flavoprotei 98.7 6.8E-08 2.3E-12 104.8 14.5 58 318-384 114-172 (512)
54 2gmh_A Electron transfer flavo 98.7 6.7E-08 2.3E-12 106.5 14.4 70 318-395 147-230 (584)
55 3i3l_A Alkylhalidase CMLS; fla 98.7 6.6E-08 2.3E-12 106.5 13.7 66 318-394 131-196 (591)
56 2gjc_A Thiazole biosynthetic e 98.7 6.3E-08 2.2E-12 98.1 11.7 38 115-152 63-101 (326)
57 3p1w_A Rabgdi protein; GDI RAB 98.7 4.9E-08 1.7E-12 104.1 11.4 42 113-155 16-57 (475)
58 3nix_A Flavoprotein/dehydrogen 98.7 1.1E-07 3.8E-12 100.0 13.4 35 116-151 4-38 (421)
59 3nrn_A Uncharacterized protein 98.6 2E-07 6.7E-12 98.3 13.4 35 119-154 2-36 (421)
60 3cp8_A TRNA uridine 5-carboxym 98.6 6.2E-08 2.1E-12 106.5 9.1 37 114-151 18-54 (641)
61 3ihg_A RDME; flavoenzyme, anth 98.6 1.3E-06 4.5E-11 95.1 19.4 36 116-152 4-39 (535)
62 2qa1_A PGAE, polyketide oxygen 98.6 5.9E-07 2E-11 97.0 15.8 39 113-152 7-45 (500)
63 3c4n_A Uncharacterized protein 98.6 3.1E-08 1.1E-12 104.1 5.0 37 116-152 35-72 (405)
64 4a9w_A Monooxygenase; baeyer-v 98.5 2.6E-07 8.8E-12 94.3 10.5 35 117-152 3-37 (357)
65 2bry_A NEDD9 interacting prote 98.5 1.2E-07 4E-12 102.5 8.0 36 116-152 91-126 (497)
66 3lxd_A FAD-dependent pyridine 98.5 5.6E-07 1.9E-11 94.8 12.9 66 319-396 198-263 (415)
67 1yvv_A Amine oxidase, flavin-c 98.5 3.1E-07 1E-11 93.3 10.5 36 117-153 2-37 (336)
68 2qa2_A CABE, polyketide oxygen 98.5 8.4E-07 2.9E-11 95.8 14.5 37 115-152 10-46 (499)
69 3kkj_A Amine oxidase, flavin-c 98.5 7.1E-08 2.4E-12 93.3 5.4 36 117-153 2-37 (336)
70 3itj_A Thioredoxin reductase 1 98.5 4.7E-07 1.6E-11 91.8 11.5 61 320-389 214-276 (338)
71 3fmw_A Oxygenase; mithramycin, 98.5 8.9E-07 3E-11 97.1 13.7 36 116-152 48-83 (570)
72 1k0i_A P-hydroxybenzoate hydro 98.4 2.1E-07 7.2E-12 97.1 7.4 34 117-151 2-35 (394)
73 3f8d_A Thioredoxin reductase ( 98.4 1.2E-06 4.1E-11 88.0 12.6 66 320-395 195-262 (323)
74 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 2E-07 6.7E-12 95.4 6.5 35 118-153 2-39 (342)
75 2dkh_A 3-hydroxybenzoate hydro 98.4 1.3E-06 4.6E-11 97.1 12.9 37 115-152 30-67 (639)
76 3s5w_A L-ornithine 5-monooxyge 98.4 2.9E-06 9.8E-11 90.5 14.0 37 116-153 29-70 (463)
77 2r0c_A REBC; flavin adenine di 98.3 8.2E-06 2.8E-10 89.1 17.4 36 116-152 25-60 (549)
78 3fg2_P Putative rubredoxin red 98.3 2.5E-06 8.7E-11 89.4 11.2 66 319-396 188-253 (404)
79 2gv8_A Monooxygenase; FMO, FAD 98.3 5.3E-06 1.8E-10 88.1 13.4 37 116-153 5-43 (447)
80 2xve_A Flavin-containing monoo 98.3 4.9E-06 1.7E-10 89.0 13.1 66 317-390 103-172 (464)
81 4a5l_A Thioredoxin reductase; 98.2 5.7E-07 2E-11 90.4 4.6 37 115-152 2-38 (314)
82 4gcm_A TRXR, thioredoxin reduc 98.2 7E-07 2.4E-11 89.9 5.2 36 116-152 5-40 (312)
83 4gde_A UDP-galactopyranose mut 98.2 6.3E-07 2.2E-11 96.6 5.1 41 116-156 9-49 (513)
84 4fk1_A Putative thioredoxin re 98.2 7.1E-07 2.4E-11 89.7 5.0 36 116-152 5-40 (304)
85 3fpz_A Thiazole biosynthetic e 98.2 1.1E-06 3.7E-11 89.4 5.6 39 115-153 63-102 (326)
86 2bcg_G Secretory pathway GDP d 98.2 1.2E-06 4E-11 93.5 6.0 42 114-156 8-49 (453)
87 3gwf_A Cyclohexanone monooxyge 98.2 2.4E-06 8.2E-11 93.1 8.3 36 116-152 7-43 (540)
88 3uox_A Otemo; baeyer-villiger 98.2 4E-06 1.4E-10 91.4 10.1 36 116-152 8-43 (545)
89 4ap3_A Steroid monooxygenase; 98.1 4.7E-06 1.6E-10 91.0 9.8 36 116-152 20-55 (549)
90 1c0p_A D-amino acid oxidase; a 98.1 2.1E-06 7.3E-11 88.3 5.7 37 115-152 4-40 (363)
91 3rp8_A Flavoprotein monooxygen 98.1 2.1E-06 7.2E-11 89.9 5.5 38 114-152 20-57 (407)
92 3k7m_X 6-hydroxy-L-nicotine ox 98.1 2.5E-06 8.4E-11 90.0 5.2 36 118-154 2-37 (431)
93 1v0j_A UDP-galactopyranose mut 98.0 5E-06 1.7E-10 87.1 6.0 42 115-156 5-46 (399)
94 4b63_A L-ornithine N5 monooxyg 97.9 0.00025 8.6E-09 76.4 18.4 64 317-382 147-212 (501)
95 2cul_A Glucose-inhibited divis 97.9 7.7E-06 2.6E-10 78.9 5.1 33 117-150 3-35 (232)
96 2vvm_A Monoamine oxidase N; FA 97.9 1E-05 3.4E-10 87.0 6.4 38 116-154 38-75 (495)
97 3hdq_A UDP-galactopyranose mut 97.9 9.8E-06 3.3E-10 84.5 6.0 40 115-155 27-66 (397)
98 1s3e_A Amine oxidase [flavin-c 97.9 8.1E-06 2.8E-10 88.4 5.3 38 116-154 3-40 (520)
99 1i8t_A UDP-galactopyranose mut 97.9 8.5E-06 2.9E-10 84.3 5.2 38 117-155 1-38 (367)
100 3lad_A Dihydrolipoamide dehydr 97.9 8.3E-06 2.9E-10 87.3 5.1 36 116-152 2-37 (476)
101 3o0h_A Glutathione reductase; 97.9 8.8E-06 3E-10 87.4 5.3 34 116-150 25-58 (484)
102 3cty_A Thioredoxin reductase; 97.9 9.6E-06 3.3E-10 81.7 5.1 59 328-394 202-262 (319)
103 2jae_A L-amino acid oxidase; o 97.9 1.3E-05 4.6E-10 85.9 6.5 40 115-155 9-48 (489)
104 1d5t_A Guanine nucleotide diss 97.9 1.3E-05 4.5E-10 84.8 6.3 41 114-155 3-43 (433)
105 2x3n_A Probable FAD-dependent 97.8 1E-05 3.6E-10 84.3 5.2 36 116-152 5-40 (399)
106 3i6d_A Protoporphyrinogen oxid 97.8 7.7E-06 2.6E-10 86.9 4.2 37 117-154 5-47 (470)
107 2b9w_A Putative aminooxidase; 97.8 1.4E-05 4.7E-10 84.0 6.0 39 116-155 5-44 (424)
108 3c96_A Flavin-containing monoo 97.8 1.1E-05 3.9E-10 84.4 5.3 35 117-152 4-39 (410)
109 2xdo_A TETX2 protein; tetracyc 97.8 1.4E-05 4.7E-10 83.5 5.8 36 116-152 25-60 (398)
110 1rsg_A FMS1 protein; FAD bindi 97.8 1.2E-05 4E-10 87.1 4.9 39 116-155 7-46 (516)
111 3l8k_A Dihydrolipoyl dehydroge 97.8 1.2E-05 4.2E-10 85.8 4.9 37 116-153 3-39 (466)
112 2ivd_A PPO, PPOX, protoporphyr 97.8 1.3E-05 4.3E-10 85.7 4.9 39 115-154 14-52 (478)
113 3g3e_A D-amino-acid oxidase; F 97.8 1.3E-05 4.4E-10 82.0 4.7 33 119-152 2-40 (351)
114 3ab1_A Ferredoxin--NADP reduct 97.8 1.5E-05 5.2E-10 81.7 5.3 66 320-394 207-273 (360)
115 3nks_A Protoporphyrinogen oxid 97.8 1.4E-05 4.9E-10 85.2 5.2 37 118-155 3-41 (477)
116 3alj_A 2-methyl-3-hydroxypyrid 97.8 1.7E-05 5.6E-10 82.2 5.4 35 117-152 11-45 (379)
117 2yg5_A Putrescine oxidase; oxi 97.8 1.6E-05 5.6E-10 84.2 5.3 38 116-154 4-41 (453)
118 3dk9_A Grase, GR, glutathione 97.8 1.4E-05 4.8E-10 85.6 4.4 35 116-151 19-53 (478)
119 4dna_A Probable glutathione re 97.8 1.7E-05 5.9E-10 84.6 5.1 34 116-150 4-37 (463)
120 3ihm_A Styrene monooxygenase A 97.7 1.5E-05 5.1E-10 84.3 4.5 34 117-151 22-55 (430)
121 1sez_A Protoporphyrinogen oxid 97.7 1.9E-05 6.5E-10 85.0 5.4 40 115-155 11-50 (504)
122 3ics_A Coenzyme A-disulfide re 97.7 0.00018 6.3E-09 79.0 13.3 36 117-152 36-72 (588)
123 2e1m_A L-glutamate oxidase; L- 97.7 2.4E-05 8.1E-10 81.0 5.7 38 116-154 43-81 (376)
124 2vou_A 2,6-dihydroxypyridine h 97.7 2.2E-05 7.5E-10 81.9 5.5 36 116-152 4-39 (397)
125 2zbw_A Thioredoxin reductase; 97.7 2.3E-05 7.8E-10 79.4 5.5 65 320-394 196-262 (335)
126 3fbs_A Oxidoreductase; structu 97.7 2E-05 6.9E-10 78.0 4.9 35 117-152 2-36 (297)
127 2ywl_A Thioredoxin reductase r 97.7 2.3E-05 7.8E-10 72.0 5.0 33 118-151 2-34 (180)
128 2q7v_A Thioredoxin reductase; 97.7 2E-05 7E-10 79.5 5.1 60 321-390 194-255 (325)
129 3dgh_A TRXR-1, thioredoxin red 97.7 2.1E-05 7.1E-10 84.4 5.2 34 116-150 8-41 (483)
130 3urh_A Dihydrolipoyl dehydroge 97.7 2.2E-05 7.7E-10 84.3 5.4 37 116-153 24-60 (491)
131 4b1b_A TRXR, thioredoxin reduc 97.7 2.2E-05 7.4E-10 85.4 5.0 35 116-151 41-75 (542)
132 3qfa_A Thioredoxin reductase 1 97.7 2.3E-05 7.8E-10 85.0 5.2 35 116-151 31-65 (519)
133 3lzw_A Ferredoxin--NADP reduct 97.7 2.7E-05 9.3E-10 78.4 5.2 59 328-395 201-261 (332)
134 3dgz_A Thioredoxin reductase 2 97.7 2.3E-05 7.7E-10 84.3 4.8 35 116-151 5-39 (488)
135 3ic9_A Dihydrolipoamide dehydr 97.7 2.3E-05 7.7E-10 84.4 4.7 34 117-151 8-41 (492)
136 2r9z_A Glutathione amide reduc 97.7 2.7E-05 9.4E-10 83.0 5.2 35 116-151 3-37 (463)
137 2aqj_A Tryptophan halogenase, 97.7 2.9E-05 9.8E-10 84.5 5.4 35 116-151 4-41 (538)
138 1mo9_A ORF3; nucleotide bindin 97.7 3.6E-05 1.2E-09 83.5 6.0 68 320-395 260-328 (523)
139 1ges_A Glutathione reductase; 97.7 2.7E-05 9.3E-10 82.7 4.8 35 116-151 3-37 (450)
140 3lov_A Protoporphyrinogen oxid 97.7 2.9E-05 1E-09 82.8 5.0 37 117-154 4-42 (475)
141 2a87_A TRXR, TR, thioredoxin r 97.7 2.4E-05 8E-10 79.5 4.1 35 115-150 12-46 (335)
142 1zk7_A HGII, reductase, mercur 97.6 3.5E-05 1.2E-09 82.2 5.5 35 116-151 3-37 (467)
143 1ojt_A Surface protein; redox- 97.6 2.9E-05 9.9E-10 83.3 4.6 38 115-153 4-41 (482)
144 1v59_A Dihydrolipoamide dehydr 97.6 2.6E-05 8.9E-10 83.5 4.1 37 116-153 4-40 (478)
145 2weu_A Tryptophan 5-halogenase 97.6 2.5E-05 8.6E-10 84.3 4.0 34 117-151 2-38 (511)
146 2q0l_A TRXR, thioredoxin reduc 97.6 3.4E-05 1.2E-09 77.2 4.6 63 321-392 185-249 (311)
147 2hqm_A GR, grase, glutathione 97.6 3.7E-05 1.3E-09 82.4 5.0 35 116-151 10-44 (479)
148 3hyw_A Sulfide-quinone reducta 97.6 0.00018 6.2E-09 75.9 10.1 63 318-395 203-266 (430)
149 2qae_A Lipoamide, dihydrolipoy 97.6 4.7E-05 1.6E-09 81.3 5.4 36 117-153 2-37 (468)
150 3r9u_A Thioredoxin reductase; 97.6 3.5E-05 1.2E-09 76.9 4.2 62 320-390 188-250 (315)
151 3g5s_A Methylenetetrahydrofola 97.6 4.5E-05 1.5E-09 78.5 4.9 35 118-153 2-36 (443)
152 3d1c_A Flavin-containing putat 97.6 4.5E-05 1.5E-09 78.2 5.0 34 117-151 4-38 (369)
153 2yqu_A 2-oxoglutarate dehydrog 97.6 4.7E-05 1.6E-09 81.0 5.2 36 117-153 1-36 (455)
154 4dsg_A UDP-galactopyranose mut 97.6 5.7E-05 1.9E-09 81.1 5.9 39 116-155 8-47 (484)
155 1dxl_A Dihydrolipoamide dehydr 97.6 5.5E-05 1.9E-09 80.7 5.8 37 116-153 5-41 (470)
156 2bi7_A UDP-galactopyranose mut 97.6 5.6E-05 1.9E-09 78.6 5.6 38 117-155 3-40 (384)
157 2iid_A L-amino-acid oxidase; f 97.6 5.2E-05 1.8E-09 81.4 5.5 38 116-154 32-69 (498)
158 1zmd_A Dihydrolipoyl dehydroge 97.6 4.6E-05 1.6E-09 81.5 4.9 37 116-153 5-41 (474)
159 3c4a_A Probable tryptophan hyd 97.6 5.2E-05 1.8E-09 78.6 5.1 34 119-152 2-36 (381)
160 1onf_A GR, grase, glutathione 97.6 5E-05 1.7E-09 81.8 5.2 34 117-151 2-35 (500)
161 1w4x_A Phenylacetone monooxyge 97.5 6.4E-05 2.2E-09 81.8 6.0 37 116-153 15-51 (542)
162 2e4g_A Tryptophan halogenase; 97.5 5.2E-05 1.8E-09 82.7 5.3 35 116-151 24-61 (550)
163 1fl2_A Alkyl hydroperoxide red 97.5 4.7E-05 1.6E-09 76.1 4.4 54 329-390 193-248 (310)
164 2wpf_A Trypanothione reductase 97.5 5.4E-05 1.8E-09 81.5 4.9 34 115-149 5-39 (495)
165 4hb9_A Similarities with proba 97.5 6.3E-05 2.1E-09 78.1 5.2 33 119-152 3-35 (412)
166 1ebd_A E3BD, dihydrolipoamide 97.5 5.3E-05 1.8E-09 80.6 4.7 33 117-150 3-35 (455)
167 1trb_A Thioredoxin reductase; 97.5 4.5E-05 1.6E-09 76.5 3.9 60 321-389 190-252 (320)
168 1fec_A Trypanothione reductase 97.5 6.2E-05 2.1E-09 80.9 5.2 32 116-148 2-34 (490)
169 2pyx_A Tryptophan halogenase; 97.5 5.9E-05 2E-09 81.8 5.0 35 116-151 6-52 (526)
170 2a8x_A Dihydrolipoyl dehydroge 97.5 5.9E-05 2E-09 80.4 4.7 33 117-150 3-35 (464)
171 1vdc_A NTR, NADPH dependent th 97.5 5E-05 1.7E-09 76.7 4.0 60 323-389 203-264 (333)
172 1lvl_A Dihydrolipoamide dehydr 97.5 6.3E-05 2.2E-09 80.1 4.8 34 116-150 4-37 (458)
173 1b37_A Protein (polyamine oxid 97.4 8.3E-05 2.9E-09 79.3 5.0 38 116-154 3-41 (472)
174 1pn0_A Phenol 2-monooxygenase; 97.4 8E-05 2.7E-09 83.1 4.8 35 117-152 8-47 (665)
175 2eq6_A Pyruvate dehydrogenase 97.4 8.8E-05 3E-09 79.1 4.9 34 117-151 6-39 (464)
176 1vg0_A RAB proteins geranylger 97.4 0.00012 4.2E-09 80.4 6.1 42 113-155 4-45 (650)
177 3k30_A Histamine dehydrogenase 97.4 0.00014 4.7E-09 81.6 6.5 39 115-154 389-427 (690)
178 4gut_A Lysine-specific histone 97.4 0.00012 3.9E-09 83.0 5.6 39 116-155 335-373 (776)
179 2vdc_G Glutamate synthase [NAD 97.4 0.00013 4.4E-09 77.7 5.6 38 116-154 121-158 (456)
180 2x8g_A Thioredoxin glutathione 97.3 0.00012 4.1E-09 80.7 4.8 34 116-150 106-139 (598)
181 1xdi_A RV3303C-LPDA; reductase 97.3 0.00014 4.8E-09 78.3 4.6 35 117-151 2-38 (499)
182 2v3a_A Rubredoxin reductase; a 97.3 0.00015 5.3E-09 75.1 4.8 64 319-395 191-254 (384)
183 1q1r_A Putidaredoxin reductase 97.3 0.00019 6.4E-09 75.8 5.3 66 320-395 196-261 (431)
184 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00017 5.8E-09 78.1 5.0 61 321-390 396-459 (521)
185 2cdu_A NADPH oxidase; flavoenz 97.2 0.00024 8.3E-09 75.3 5.1 36 118-153 1-37 (452)
186 3oc4_A Oxidoreductase, pyridin 97.1 0.00031 1E-08 74.6 5.3 37 118-154 3-40 (452)
187 2z3y_A Lysine-specific histone 97.1 0.0003 1E-08 78.4 5.5 38 116-154 106-143 (662)
188 1xhc_A NADH oxidase /nitrite r 97.1 0.00027 9.4E-09 72.8 4.6 34 118-153 9-42 (367)
189 2bc0_A NADH oxidase; flavoprot 97.1 0.00025 8.6E-09 76.1 4.2 36 117-153 35-73 (490)
190 1o94_A Tmadh, trimethylamine d 97.1 0.00038 1.3E-08 78.5 5.8 38 116-154 388-425 (729)
191 1m6i_A Programmed cell death p 97.1 0.00038 1.3E-08 74.8 5.6 63 320-395 231-293 (493)
192 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00038 1.3E-08 77.7 5.8 38 116-154 372-409 (671)
193 3sx6_A Sulfide-quinone reducta 97.1 0.00034 1.2E-08 73.8 5.0 36 117-153 4-42 (437)
194 3h8l_A NADH oxidase; membrane 97.1 0.00033 1.1E-08 73.1 4.8 35 118-153 2-39 (409)
195 3h28_A Sulfide-quinone reducta 97.1 0.00036 1.2E-08 73.5 5.0 35 118-153 3-39 (430)
196 3kd9_A Coenzyme A disulfide re 97.1 0.00043 1.5E-08 73.3 5.4 37 117-153 3-40 (449)
197 3iwa_A FAD-dependent pyridine 97.1 0.00035 1.2E-08 74.5 4.7 64 319-395 206-269 (472)
198 1y56_A Hypothetical protein PH 97.0 0.00026 8.9E-09 76.1 3.6 56 328-395 269-324 (493)
199 2gqw_A Ferredoxin reductase; f 97.0 0.00042 1.4E-08 72.5 5.1 37 116-153 6-44 (408)
200 2gag_A Heterotetrameric sarcos 97.0 0.00038 1.3E-08 80.9 5.1 59 328-393 328-392 (965)
201 1mo9_A ORF3; nucleotide bindin 97.0 0.0055 1.9E-07 66.1 14.1 33 118-151 215-247 (523)
202 3cgb_A Pyridine nucleotide-dis 97.0 0.00042 1.4E-08 74.1 5.1 37 117-153 36-73 (480)
203 2xag_A Lysine-specific histone 97.0 0.00049 1.7E-08 78.5 5.8 38 116-154 277-314 (852)
204 1nhp_A NADH peroxidase; oxidor 97.0 0.00047 1.6E-08 73.0 5.2 36 118-153 1-37 (447)
205 3cty_A Thioredoxin reductase; 97.0 0.0028 9.6E-08 63.3 10.6 32 118-150 156-187 (319)
206 2eq6_A Pyruvate dehydrogenase 97.0 0.0036 1.2E-07 66.5 11.7 33 118-151 170-202 (464)
207 2v3a_A Rubredoxin reductase; a 96.9 0.0058 2E-07 63.1 11.9 33 118-151 146-178 (384)
208 3ab1_A Ferredoxin--NADP reduct 96.9 0.007 2.4E-07 61.6 12.3 32 119-151 165-196 (360)
209 1cjc_A Protein (adrenodoxin re 96.9 0.00077 2.6E-08 71.7 5.2 36 117-153 6-43 (460)
210 1trb_A Thioredoxin reductase; 96.8 0.0073 2.5E-07 60.1 12.1 33 118-151 146-178 (320)
211 1ebd_A E3BD, dihydrolipoamide 96.8 0.0061 2.1E-07 64.5 12.0 32 118-150 171-202 (455)
212 1gte_A Dihydropyrimidine dehyd 96.8 0.00083 2.9E-08 78.6 5.5 38 116-154 186-224 (1025)
213 2q0l_A TRXR, thioredoxin reduc 96.8 0.0093 3.2E-07 59.2 12.1 33 118-151 144-176 (311)
214 3ef6_A Toluene 1,2-dioxygenase 96.8 0.0031 1.1E-07 65.8 9.0 56 328-395 197-252 (410)
215 1q1r_A Putidaredoxin reductase 96.8 0.0051 1.7E-07 64.7 10.6 33 118-151 150-182 (431)
216 1v59_A Dihydrolipoamide dehydr 96.8 0.0085 2.9E-07 63.7 12.4 33 118-151 184-216 (478)
217 1fl2_A Alkyl hydroperoxide red 96.7 0.012 4.2E-07 58.2 12.4 32 119-151 146-177 (310)
218 3ef6_A Toluene 1,2-dioxygenase 96.7 0.0012 4.2E-08 68.9 5.1 35 118-153 3-39 (410)
219 1vdc_A NTR, NADPH dependent th 96.6 0.013 4.5E-07 58.7 12.2 33 118-151 160-192 (333)
220 3ntd_A FAD-dependent pyridine 96.6 0.0013 4.4E-08 71.7 5.0 36 118-153 2-38 (565)
221 1lqt_A FPRA; NADP+ derivative, 96.6 0.0012 4.2E-08 70.0 4.6 37 117-153 3-45 (456)
222 3cgb_A Pyridine nucleotide-dis 96.6 0.0037 1.3E-07 66.8 8.4 33 117-150 186-218 (480)
223 3ayj_A Pro-enzyme of L-phenyla 96.6 0.001 3.6E-08 74.0 3.8 36 117-153 56-100 (721)
224 2zbw_A Thioredoxin reductase; 96.6 0.015 5.2E-07 58.2 12.1 33 118-151 153-185 (335)
225 2q7v_A Thioredoxin reductase; 96.5 0.015 5E-07 58.2 11.7 33 118-151 153-185 (325)
226 3vrd_B FCCB subunit, flavocyto 96.5 0.0021 7.2E-08 66.7 5.0 34 119-152 4-38 (401)
227 2a8x_A Dihydrolipoyl dehydroge 96.4 0.012 4.1E-07 62.3 10.7 33 118-151 172-204 (464)
228 4eqs_A Coenzyme A disulfide re 96.4 0.0021 7.3E-08 67.8 4.7 33 120-153 3-37 (437)
229 1hyu_A AHPF, alkyl hydroperoxi 96.4 0.019 6.5E-07 61.9 12.3 33 118-151 356-388 (521)
230 1zmd_A Dihydrolipoyl dehydroge 96.4 0.015 5E-07 61.8 11.3 33 118-151 179-211 (474)
231 3ic9_A Dihydrolipoamide dehydr 96.3 0.022 7.4E-07 60.9 12.3 33 118-151 175-207 (492)
232 2hqm_A GR, grase, glutathione 96.3 0.0075 2.6E-07 64.3 8.4 33 118-151 186-218 (479)
233 2qae_A Lipoamide, dihydrolipoy 96.3 0.02 6.7E-07 60.7 11.6 33 118-151 175-207 (468)
234 3iwa_A FAD-dependent pyridine 96.2 0.023 7.9E-07 60.2 11.6 34 118-151 160-193 (472)
235 3klj_A NAD(FAD)-dependent dehy 96.2 0.0039 1.3E-07 64.6 5.2 38 116-154 8-45 (385)
236 1dxl_A Dihydrolipoamide dehydr 96.2 0.011 3.6E-07 62.8 8.7 33 118-151 178-210 (470)
237 3s5w_A L-ornithine 5-monooxyge 96.1 0.16 5.4E-06 53.4 17.1 36 117-152 227-263 (463)
238 3r9u_A Thioredoxin reductase; 96.1 0.025 8.7E-07 55.8 10.3 33 118-151 148-180 (315)
239 3urh_A Dihydrolipoyl dehydroge 96.0 0.035 1.2E-06 59.2 12.0 33 118-151 199-231 (491)
240 2cdu_A NADPH oxidase; flavoenz 96.0 0.019 6.4E-07 60.6 9.4 32 119-151 151-182 (452)
241 3ntd_A FAD-dependent pyridine 95.9 0.041 1.4E-06 59.7 11.9 32 119-151 153-184 (565)
242 3lad_A Dihydrolipoamide dehydr 95.9 0.075 2.6E-06 56.3 13.6 33 118-151 181-213 (476)
243 4g6h_A Rotenone-insensitive NA 95.9 0.0057 2E-07 65.7 4.8 34 118-152 43-76 (502)
244 3dgz_A Thioredoxin reductase 2 95.7 0.073 2.5E-06 56.7 12.9 31 119-150 187-217 (488)
245 3dgh_A TRXR-1, thioredoxin red 95.6 0.08 2.8E-06 56.2 12.6 31 119-150 189-219 (483)
246 3ics_A Coenzyme A-disulfide re 95.6 0.037 1.3E-06 60.5 10.2 54 328-395 240-293 (588)
247 3oc4_A Oxidoreductase, pyridin 95.6 0.078 2.7E-06 55.8 12.2 33 118-151 148-180 (452)
248 3dk9_A Grase, GR, glutathione 95.5 0.073 2.5E-06 56.4 11.9 32 119-151 189-220 (478)
249 1m6i_A Programmed cell death p 95.5 0.045 1.5E-06 58.5 10.1 32 119-150 182-216 (493)
250 3lzw_A Ferredoxin--NADP reduct 95.5 0.056 1.9E-06 53.7 10.3 33 118-151 155-187 (332)
251 4dna_A Probable glutathione re 95.5 0.038 1.3E-06 58.4 9.3 33 118-151 171-203 (463)
252 1xdi_A RV3303C-LPDA; reductase 95.4 0.029 9.8E-07 60.0 8.1 33 118-151 183-215 (499)
253 3o0h_A Glutathione reductase; 95.3 0.033 1.1E-06 59.3 8.4 33 118-151 192-224 (484)
254 1fec_A Trypanothione reductase 95.1 0.053 1.8E-06 57.8 9.0 34 118-151 188-223 (490)
255 2wpf_A Trypanothione reductase 95.0 0.064 2.2E-06 57.3 9.5 34 118-151 192-227 (495)
256 1gte_A Dihydropyrimidine dehyd 95.0 0.23 7.7E-06 58.0 14.5 31 119-150 334-365 (1025)
257 4g6h_A Rotenone-insensitive NA 94.2 0.24 8.2E-06 52.9 11.4 52 324-386 281-334 (502)
258 1nhp_A NADH peroxidase; oxidor 94.1 0.045 1.5E-06 57.5 5.4 36 116-152 148-183 (447)
259 2gag_A Heterotetrameric sarcos 93.9 0.18 6E-06 58.5 10.4 31 119-150 286-316 (965)
260 3llv_A Exopolyphosphatase-rela 93.6 0.064 2.2E-06 46.5 4.7 31 119-150 8-38 (141)
261 2g1u_A Hypothetical protein TM 93.6 0.067 2.3E-06 47.3 4.8 33 118-151 20-52 (155)
262 3fwz_A Inner membrane protein 93.6 0.065 2.2E-06 46.6 4.7 32 119-151 9-40 (140)
263 3k30_A Histamine dehydrogenase 93.5 0.29 9.8E-06 54.5 10.9 31 119-150 525-557 (690)
264 1lss_A TRK system potassium up 93.4 0.079 2.7E-06 45.4 4.9 31 119-150 6-36 (140)
265 3klj_A NAD(FAD)-dependent dehy 93.4 0.065 2.2E-06 55.3 5.0 35 118-153 147-181 (385)
266 4gcm_A TRXR, thioredoxin reduc 93.3 0.068 2.3E-06 52.9 4.9 33 119-152 147-179 (312)
267 1lvl_A Dihydrolipoamide dehydr 92.9 0.084 2.9E-06 55.7 5.1 34 118-152 172-205 (458)
268 1id1_A Putative potassium chan 92.8 0.1 3.4E-06 46.0 4.7 31 119-150 5-35 (153)
269 2yqu_A 2-oxoglutarate dehydrog 92.6 0.1 3.5E-06 54.9 5.2 34 118-152 168-201 (455)
270 1xhc_A NADH oxidase /nitrite r 92.3 0.1 3.5E-06 53.3 4.7 34 118-152 144-177 (367)
271 4a5l_A Thioredoxin reductase; 92.1 0.12 4.1E-06 51.0 4.8 33 118-151 153-185 (314)
272 3ic5_A Putative saccharopine d 92.1 0.13 4.5E-06 42.5 4.3 31 119-150 7-38 (118)
273 1ges_A Glutathione reductase; 91.6 0.16 5.3E-06 53.5 5.2 34 118-152 168-201 (450)
274 2hmt_A YUAA protein; RCK, KTN, 91.5 0.15 5E-06 43.8 4.1 31 119-150 8-38 (144)
275 2gqw_A Ferredoxin reductase; f 91.2 0.19 6.6E-06 52.0 5.4 34 118-152 146-179 (408)
276 2bc0_A NADH oxidase; flavoprot 90.6 0.23 7.8E-06 52.8 5.4 34 118-152 195-228 (490)
277 3d1c_A Flavin-containing putat 90.5 0.2 7E-06 50.5 4.7 33 119-152 168-200 (369)
278 2r9z_A Glutathione amide reduc 90.5 0.23 7.9E-06 52.4 5.2 33 119-152 168-200 (463)
279 1ojt_A Surface protein; redox- 90.2 0.24 8.2E-06 52.5 5.0 34 118-152 186-219 (482)
280 3l4b_C TRKA K+ channel protien 90.0 0.22 7.4E-06 46.7 4.1 31 120-151 3-33 (218)
281 3ado_A Lambda-crystallin; L-gu 90.0 0.23 8E-06 49.6 4.4 31 119-150 8-38 (319)
282 4eqs_A Coenzyme A disulfide re 89.9 0.28 9.5E-06 51.4 5.2 33 119-152 149-181 (437)
283 3kd9_A Coenzyme A disulfide re 89.9 0.29 1E-05 51.2 5.4 33 119-152 150-182 (449)
284 3i83_A 2-dehydropantoate 2-red 89.8 0.28 9.4E-06 49.1 4.9 32 119-151 4-35 (320)
285 3hn2_A 2-dehydropantoate 2-red 89.4 0.28 9.6E-06 48.8 4.6 32 119-151 4-35 (312)
286 1onf_A GR, grase, glutathione 89.2 0.32 1.1E-05 51.9 5.1 34 118-152 177-210 (500)
287 2gv8_A Monooxygenase; FMO, FAD 89.1 0.28 9.5E-06 51.4 4.5 34 118-152 213-247 (447)
288 2xve_A Flavin-containing monoo 88.8 0.33 1.1E-05 51.2 4.8 33 119-152 199-231 (464)
289 3gwf_A Cyclohexanone monooxyge 88.7 0.34 1.2E-05 52.2 5.0 35 118-153 179-213 (540)
290 1f0y_A HCDH, L-3-hydroxyacyl-C 88.7 0.36 1.2E-05 47.7 4.7 31 119-150 17-47 (302)
291 3uox_A Otemo; baeyer-villiger 88.7 0.32 1.1E-05 52.5 4.7 35 118-153 186-220 (545)
292 4e12_A Diketoreductase; oxidor 88.6 0.37 1.3E-05 47.2 4.7 32 119-151 6-37 (283)
293 1zk7_A HGII, reductase, mercur 88.4 0.41 1.4E-05 50.4 5.2 34 118-152 177-210 (467)
294 1jw9_B Molybdopterin biosynthe 88.3 0.4 1.4E-05 46.1 4.7 34 118-152 32-66 (249)
295 4ap3_A Steroid monooxygenase; 88.3 0.38 1.3E-05 52.0 4.9 35 118-153 192-226 (549)
296 1ks9_A KPA reductase;, 2-dehyd 88.3 0.45 1.5E-05 46.3 5.1 31 120-151 3-33 (291)
297 3dfz_A SIRC, precorrin-2 dehyd 88.1 0.42 1.5E-05 45.1 4.5 31 118-149 32-62 (223)
298 2raf_A Putative dinucleotide-b 88.0 0.51 1.7E-05 44.0 5.0 33 118-151 20-52 (209)
299 2a87_A TRXR, TR, thioredoxin r 88.0 0.43 1.5E-05 47.6 4.8 34 118-152 156-189 (335)
300 3lxd_A FAD-dependent pyridine 87.9 0.49 1.7E-05 48.9 5.4 35 118-153 153-187 (415)
301 3g17_A Similar to 2-dehydropan 87.8 0.34 1.2E-05 47.8 3.9 32 119-151 4-35 (294)
302 3fg2_P Putative rubredoxin red 87.8 0.48 1.7E-05 48.8 5.3 35 118-153 143-177 (404)
303 3ghy_A Ketopantoate reductase 87.8 0.4 1.4E-05 48.2 4.5 31 119-150 5-35 (335)
304 1kyq_A Met8P, siroheme biosynt 87.6 0.35 1.2E-05 47.2 3.7 31 119-150 15-45 (274)
305 3l8k_A Dihydrolipoyl dehydroge 87.3 0.52 1.8E-05 49.6 5.2 34 118-152 173-206 (466)
306 3c85_A Putative glutathione-re 87.1 0.48 1.6E-05 42.8 4.1 33 119-151 41-73 (183)
307 3itj_A Thioredoxin reductase 1 87.0 0.52 1.8E-05 46.6 4.8 35 118-153 174-208 (338)
308 2x8g_A Thioredoxin glutathione 86.9 0.48 1.6E-05 51.6 4.8 31 119-150 288-318 (598)
309 1lld_A L-lactate dehydrogenase 86.8 0.57 1.9E-05 46.6 4.8 32 119-151 9-42 (319)
310 2ew2_A 2-dehydropantoate 2-red 86.6 0.56 1.9E-05 46.2 4.7 31 119-150 5-35 (316)
311 2y0c_A BCEC, UDP-glucose dehyd 86.3 0.56 1.9E-05 49.7 4.7 33 118-151 9-41 (478)
312 3ego_A Probable 2-dehydropanto 86.3 0.59 2E-05 46.4 4.6 31 119-151 4-34 (307)
313 3hwr_A 2-dehydropantoate 2-red 86.0 0.62 2.1E-05 46.4 4.6 31 118-150 20-50 (318)
314 3k6j_A Protein F01G10.3, confi 85.9 1.3 4.4E-05 46.5 7.2 33 119-152 56-88 (460)
315 2dpo_A L-gulonate 3-dehydrogen 85.6 0.65 2.2E-05 46.4 4.5 32 119-151 8-39 (319)
316 3f8d_A Thioredoxin reductase ( 85.5 0.77 2.6E-05 44.9 5.1 35 118-153 155-189 (323)
317 4g65_A TRK system potassium up 85.3 0.44 1.5E-05 50.2 3.3 33 119-152 5-37 (461)
318 3l9w_A Glutathione-regulated p 85.2 0.69 2.4E-05 48.0 4.7 33 119-152 6-38 (413)
319 1txg_A Glycerol-3-phosphate de 84.7 0.73 2.5E-05 45.9 4.5 29 120-149 3-31 (335)
320 2a9f_A Putative malic enzyme ( 84.7 0.79 2.7E-05 46.9 4.7 33 118-151 189-222 (398)
321 4b1b_A TRXR, thioredoxin reduc 84.7 0.79 2.7E-05 49.4 5.0 31 119-150 225-255 (542)
322 1nyt_A Shikimate 5-dehydrogena 84.5 0.84 2.9E-05 44.3 4.7 32 119-151 121-152 (271)
323 2ewd_A Lactate dehydrogenase,; 84.4 1.1 3.6E-05 44.7 5.5 32 119-151 6-38 (317)
324 3oj0_A Glutr, glutamyl-tRNA re 84.4 0.46 1.6E-05 41.2 2.5 32 119-151 23-54 (144)
325 3qfa_A Thioredoxin reductase 1 84.3 0.79 2.7E-05 49.0 4.8 31 119-150 212-242 (519)
326 1bg6_A N-(1-D-carboxylethyl)-L 84.3 0.82 2.8E-05 46.0 4.7 31 119-150 6-36 (359)
327 3k96_A Glycerol-3-phosphate de 84.3 0.82 2.8E-05 46.4 4.7 33 118-151 30-62 (356)
328 3gg2_A Sugar dehydrogenase, UD 84.3 0.8 2.7E-05 48.1 4.7 32 119-151 4-35 (450)
329 2cul_A Glucose-inhibited divis 84.2 1.7 5.6E-05 40.9 6.6 56 319-387 72-128 (232)
330 3fbs_A Oxidoreductase; structu 84.1 0.82 2.8E-05 44.2 4.5 32 118-151 142-173 (297)
331 1zcj_A Peroxisomal bifunctiona 84.0 0.79 2.7E-05 48.3 4.6 32 119-151 39-70 (463)
332 1mv8_A GMD, GDP-mannose 6-dehy 84.0 0.8 2.7E-05 47.9 4.6 31 120-151 3-33 (436)
333 1z82_A Glycerol-3-phosphate de 84.0 0.88 3E-05 45.6 4.7 33 118-151 15-47 (335)
334 1pzg_A LDH, lactate dehydrogen 83.9 0.96 3.3E-05 45.4 5.0 32 119-151 11-43 (331)
335 4dio_A NAD(P) transhydrogenase 83.8 1 3.4E-05 46.5 5.1 33 118-151 191-223 (405)
336 1vl6_A Malate oxidoreductase; 83.8 0.91 3.1E-05 46.3 4.7 35 117-152 192-227 (388)
337 3rui_A Ubiquitin-like modifier 83.4 1 3.5E-05 45.3 4.8 34 118-152 35-69 (340)
338 2v6b_A L-LDH, L-lactate dehydr 83.3 0.99 3.4E-05 44.7 4.7 31 120-151 3-35 (304)
339 1zej_A HBD-9, 3-hydroxyacyl-CO 83.2 0.97 3.3E-05 44.5 4.5 31 119-151 14-44 (293)
340 3lk7_A UDP-N-acetylmuramoylala 83.2 0.99 3.4E-05 47.3 4.9 32 119-151 11-42 (451)
341 1jay_A Coenzyme F420H2:NADP+ o 83.2 1.1 3.6E-05 41.5 4.6 30 120-150 3-33 (212)
342 3g79_A NDP-N-acetyl-D-galactos 83.1 1 3.6E-05 47.5 5.0 34 119-152 20-54 (478)
343 2vdc_G Glutamate synthase [NAD 83.0 1 3.5E-05 47.3 4.9 34 118-152 265-299 (456)
344 4a7p_A UDP-glucose dehydrogena 82.9 1.1 3.9E-05 46.8 5.2 35 117-152 8-42 (446)
345 3vtf_A UDP-glucose 6-dehydroge 82.8 1.1 3.7E-05 46.9 4.9 34 117-151 21-54 (444)
346 2hjr_A Malate dehydrogenase; m 82.8 1.2 4.1E-05 44.7 5.1 32 119-151 16-48 (328)
347 3ond_A Adenosylhomocysteinase; 82.8 1 3.5E-05 47.5 4.7 31 119-150 267-297 (488)
348 1cjc_A Protein (adrenodoxin re 82.6 1 3.5E-05 47.3 4.8 53 328-386 269-335 (460)
349 3dtt_A NADP oxidoreductase; st 82.5 1.2 4.1E-05 42.4 4.9 33 118-151 20-52 (245)
350 2vns_A Metalloreductase steap3 82.4 1.2 4.1E-05 41.5 4.7 31 119-150 30-60 (215)
351 3p2y_A Alanine dehydrogenase/p 82.3 1.1 3.6E-05 45.9 4.5 33 118-151 185-217 (381)
352 3h8v_A Ubiquitin-like modifier 81.8 1.2 4.2E-05 43.7 4.7 34 117-151 36-70 (292)
353 1zud_1 Adenylyltransferase THI 81.8 1.3 4.3E-05 42.6 4.7 33 118-151 29-62 (251)
354 2eez_A Alanine dehydrogenase; 81.7 1.2 4.3E-05 45.2 4.9 31 119-150 168-198 (369)
355 4a9w_A Monooxygenase; baeyer-v 81.5 1.1 3.8E-05 44.4 4.4 32 118-151 164-195 (357)
356 3pef_A 6-phosphogluconate dehy 81.4 1.3 4.5E-05 43.2 4.7 33 119-152 3-35 (287)
357 1pjc_A Protein (L-alanine dehy 81.4 1.3 4.5E-05 45.0 4.9 32 118-150 168-199 (361)
358 3phh_A Shikimate dehydrogenase 81.4 1.5 5.2E-05 42.5 5.1 34 118-152 119-152 (269)
359 1a5z_A L-lactate dehydrogenase 80.8 1.3 4.5E-05 44.1 4.6 31 120-151 3-35 (319)
360 1evy_A Glycerol-3-phosphate de 80.8 0.88 3E-05 46.2 3.3 32 119-151 17-48 (366)
361 3doj_A AT3G25530, dehydrogenas 80.8 1.4 4.8E-05 43.6 4.8 32 119-151 23-54 (310)
362 3g0o_A 3-hydroxyisobutyrate de 80.7 1.4 4.8E-05 43.4 4.7 32 119-151 9-40 (303)
363 2x5o_A UDP-N-acetylmuramoylala 80.7 0.98 3.4E-05 47.2 3.7 33 119-152 7-39 (439)
364 1p77_A Shikimate 5-dehydrogena 80.7 1.1 3.7E-05 43.6 3.8 32 119-151 121-152 (272)
365 3mog_A Probable 3-hydroxybutyr 80.7 1.2 4.3E-05 47.1 4.5 32 119-151 7-38 (483)
366 2aef_A Calcium-gated potassium 80.6 0.75 2.6E-05 43.4 2.6 31 119-151 11-41 (234)
367 1x13_A NAD(P) transhydrogenase 80.5 1.4 4.7E-05 45.5 4.7 33 118-151 173-205 (401)
368 3c7a_A Octopine dehydrogenase; 80.1 1.1 3.7E-05 46.2 3.8 29 119-148 4-33 (404)
369 3pdu_A 3-hydroxyisobutyrate de 80.1 1.3 4.5E-05 43.1 4.2 33 119-152 3-35 (287)
370 3qha_A Putative oxidoreductase 80.0 1.4 4.7E-05 43.3 4.4 34 118-152 16-49 (296)
371 1hyh_A L-hicdh, L-2-hydroxyiso 79.8 1.5 5E-05 43.5 4.5 32 119-151 3-36 (309)
372 2egg_A AROE, shikimate 5-dehyd 79.8 1.5 5.2E-05 43.2 4.6 31 119-150 143-174 (297)
373 1yqg_A Pyrroline-5-carboxylate 79.6 1.6 5.4E-05 41.8 4.6 30 120-150 3-33 (263)
374 3gpi_A NAD-dependent epimerase 79.6 1.8 6.1E-05 41.8 5.0 33 119-152 5-37 (286)
375 3ew7_A LMO0794 protein; Q8Y8U8 79.6 1.9 6.6E-05 39.5 5.1 31 120-151 3-34 (221)
376 1yj8_A Glycerol-3-phosphate de 79.6 1.2 4.2E-05 45.3 4.0 33 119-152 23-62 (375)
377 2pv7_A T-protein [includes: ch 79.5 1.5 5.2E-05 43.1 4.5 32 119-151 23-55 (298)
378 2h78_A Hibadh, 3-hydroxyisobut 79.5 1.6 5.3E-05 42.9 4.6 32 119-151 5-36 (302)
379 3tnl_A Shikimate dehydrogenase 79.4 1.7 5.9E-05 43.2 4.8 31 119-150 156-187 (315)
380 3ojo_A CAP5O; rossmann fold, c 79.3 1.5 5.2E-05 45.6 4.6 33 119-152 13-45 (431)
381 3tl2_A Malate dehydrogenase; c 79.3 1.7 5.7E-05 43.3 4.7 31 119-150 10-41 (315)
382 2vhw_A Alanine dehydrogenase; 79.2 1.7 5.8E-05 44.4 4.9 32 118-150 169-200 (377)
383 2bcg_G Secretory pathway GDP d 79.2 1.2 4.1E-05 46.6 3.9 52 321-383 248-299 (453)
384 1o94_A Tmadh, trimethylamine d 79.2 1.4 4.7E-05 49.3 4.5 32 119-151 530-563 (729)
385 1guz_A Malate dehydrogenase; o 79.2 1.9 6.5E-05 42.7 5.1 33 120-152 3-36 (310)
386 2f1k_A Prephenate dehydrogenas 79.2 1.7 5.9E-05 42.0 4.7 31 120-151 3-33 (279)
387 1l7d_A Nicotinamide nucleotide 79.1 1.8 6.2E-05 44.3 5.1 33 118-151 173-205 (384)
388 4dll_A 2-hydroxy-3-oxopropiona 79.1 1.6 5.5E-05 43.4 4.5 32 119-151 33-64 (320)
389 3h5n_A MCCB protein; ubiquitin 79.0 1.7 6E-05 43.9 4.8 34 117-151 118-152 (353)
390 1x0v_A GPD-C, GPDH-C, glycerol 78.9 1.2 4.1E-05 44.8 3.6 33 119-152 10-49 (354)
391 1nvt_A Shikimate 5'-dehydrogen 78.9 1.4 4.8E-05 43.1 4.0 30 119-150 130-159 (287)
392 1lu9_A Methylene tetrahydromet 78.9 1.8 6.1E-05 42.3 4.8 31 119-150 121-152 (287)
393 3jyo_A Quinate/shikimate dehyd 78.9 1.8 6.1E-05 42.4 4.7 31 119-150 129-160 (283)
394 3o38_A Short chain dehydrogena 78.7 1.4 4.8E-05 42.2 3.9 30 120-150 25-56 (266)
395 1hdo_A Biliverdin IX beta redu 78.7 2 6.9E-05 38.8 4.8 31 120-151 6-37 (206)
396 3ius_A Uncharacterized conserv 78.7 1.9 6.4E-05 41.6 4.8 32 119-151 7-38 (286)
397 4gsl_A Ubiquitin-like modifier 78.6 1.7 5.9E-05 47.0 4.8 34 118-152 327-361 (615)
398 3h2s_A Putative NADH-flavin re 78.5 2 6.8E-05 39.6 4.8 31 120-151 3-34 (224)
399 3e8x_A Putative NAD-dependent 78.4 2 6.9E-05 40.1 4.9 33 119-152 23-56 (236)
400 2uyy_A N-PAC protein; long-cha 78.4 1.7 5.9E-05 42.9 4.5 32 119-151 32-63 (316)
401 4huj_A Uncharacterized protein 78.2 1.1 3.7E-05 42.0 2.8 32 119-151 25-57 (220)
402 1t2d_A LDH-P, L-lactate dehydr 78.2 2.4 8.3E-05 42.2 5.5 32 119-151 6-38 (322)
403 2hk9_A Shikimate dehydrogenase 78.1 1.8 6.3E-05 42.0 4.6 32 119-151 131-162 (275)
404 3vh1_A Ubiquitin-like modifier 77.8 1.8 6.2E-05 46.7 4.7 34 118-152 328-362 (598)
405 4ezb_A Uncharacterized conserv 77.7 1.8 6.2E-05 43.0 4.5 32 119-151 26-58 (317)
406 3u62_A Shikimate dehydrogenase 77.2 2.2 7.4E-05 41.0 4.7 32 119-151 110-142 (253)
407 1ur5_A Malate dehydrogenase; o 77.2 2 6.9E-05 42.5 4.6 32 119-151 4-36 (309)
408 1vpd_A Tartronate semialdehyde 77.2 2 6.8E-05 41.9 4.6 31 119-150 7-37 (299)
409 3qsg_A NAD-binding phosphogluc 77.1 2 6.8E-05 42.6 4.5 31 119-150 26-57 (312)
410 2g5c_A Prephenate dehydrogenas 76.9 2.1 7.3E-05 41.4 4.7 30 120-150 4-35 (281)
411 3fbt_A Chorismate mutase and s 76.8 2.2 7.5E-05 41.7 4.7 33 118-151 123-156 (282)
412 3d4o_A Dipicolinate synthase s 76.7 2.3 7.9E-05 41.7 4.9 32 119-151 157-188 (293)
413 3c24_A Putative oxidoreductase 76.7 2.1 7.3E-05 41.6 4.6 31 119-150 13-44 (286)
414 2dkn_A 3-alpha-hydroxysteroid 76.7 2.7 9.2E-05 39.5 5.2 31 120-151 4-35 (255)
415 3ggo_A Prephenate dehydrogenas 76.7 2.2 7.4E-05 42.4 4.7 32 119-151 35-68 (314)
416 1w4x_A Phenylacetone monooxyge 76.7 2.1 7.2E-05 45.9 4.9 35 118-153 187-221 (542)
417 2gf2_A Hibadh, 3-hydroxyisobut 76.7 2.2 7.4E-05 41.6 4.6 31 120-151 3-33 (296)
418 3pwz_A Shikimate dehydrogenase 76.6 2.3 7.9E-05 41.3 4.7 32 119-151 122-154 (272)
419 4gx0_A TRKA domain protein; me 76.5 2.2 7.5E-05 46.0 5.0 34 118-152 349-382 (565)
420 2rir_A Dipicolinate synthase, 76.4 2.4 8.1E-05 41.7 4.9 32 118-150 158-189 (300)
421 3don_A Shikimate dehydrogenase 76.3 1.8 6.1E-05 42.2 3.8 32 119-151 119-151 (277)
422 1leh_A Leucine dehydrogenase; 76.1 2.3 7.9E-05 43.2 4.7 31 119-150 175-205 (364)
423 1pjq_A CYSG, siroheme synthase 76.1 2.1 7.2E-05 44.9 4.6 31 119-150 14-44 (457)
424 3t4e_A Quinate/shikimate dehyd 76.0 2.5 8.5E-05 42.0 4.8 32 118-150 149-181 (312)
425 1y8q_A Ubiquitin-like 1 activa 76.0 2.1 7.3E-05 43.1 4.5 33 118-151 37-70 (346)
426 2wtb_A MFP2, fatty acid multif 76.0 1.9 6.4E-05 48.2 4.4 32 119-151 314-345 (725)
427 3o8q_A Shikimate 5-dehydrogena 75.8 2.5 8.4E-05 41.3 4.7 32 119-151 128-160 (281)
428 4e21_A 6-phosphogluconate dehy 75.7 2.5 8.4E-05 42.9 4.8 33 118-151 23-55 (358)
429 3cky_A 2-hydroxymethyl glutara 75.5 2.4 8.3E-05 41.3 4.7 31 119-150 6-36 (301)
430 3eag_A UDP-N-acetylmuramate:L- 75.5 2.6 9.1E-05 41.9 5.0 32 119-151 6-38 (326)
431 3l6d_A Putative oxidoreductase 75.4 2.4 8E-05 41.9 4.5 32 119-151 11-42 (306)
432 1d5t_A Guanine nucleotide diss 75.1 1.1 3.9E-05 46.5 2.2 50 321-383 240-289 (433)
433 3r6d_A NAD-dependent epimerase 75.1 2.9 9.8E-05 38.6 4.8 30 120-150 8-39 (221)
434 3pqe_A L-LDH, L-lactate dehydr 75.0 2.5 8.5E-05 42.3 4.6 31 119-150 7-39 (326)
435 1i36_A Conserved hypothetical 74.8 2.3 7.9E-05 40.6 4.2 29 120-149 3-31 (264)
436 1oju_A MDH, malate dehydrogena 74.7 2.6 8.8E-05 41.5 4.5 31 120-151 3-35 (294)
437 2rcy_A Pyrroline carboxylate r 74.7 2.4 8.3E-05 40.4 4.3 32 119-151 6-41 (262)
438 3nks_A Protoporphyrinogen oxid 74.6 0.98 3.3E-05 47.3 1.6 57 320-389 239-295 (477)
439 2qyt_A 2-dehydropantoate 2-red 74.6 1.9 6.6E-05 42.3 3.7 31 119-149 10-45 (317)
440 3gvi_A Malate dehydrogenase; N 74.4 3.1 0.00011 41.5 5.1 33 119-152 9-42 (324)
441 1pgj_A 6PGDH, 6-PGDH, 6-phosph 74.3 2.5 8.4E-05 44.7 4.6 32 119-151 3-34 (478)
442 2i6t_A Ubiquitin-conjugating e 74.1 2.7 9.1E-05 41.6 4.5 33 118-151 15-49 (303)
443 2zyd_A 6-phosphogluconate dehy 74.1 2.4 8.3E-05 44.8 4.4 33 118-151 16-48 (480)
444 2d5c_A AROE, shikimate 5-dehyd 74.0 2.8 9.5E-05 40.3 4.5 32 119-151 118-149 (263)
445 3dqp_A Oxidoreductase YLBE; al 73.9 2.8 9.6E-05 38.6 4.4 31 120-151 3-34 (219)
446 1edz_A 5,10-methylenetetrahydr 73.8 2.6 9E-05 41.9 4.4 32 118-150 178-210 (320)
447 3dfu_A Uncharacterized protein 73.8 1.2 4.2E-05 42.2 1.8 30 119-149 8-37 (232)
448 3d1l_A Putative NADP oxidoredu 73.7 2.7 9.3E-05 40.2 4.4 31 119-150 12-43 (266)
449 1lqt_A FPRA; NADP+ derivative, 73.6 2.7 9.3E-05 44.0 4.7 49 329-386 265-328 (456)
450 2pgd_A 6-phosphogluconate dehy 73.6 2.8 9.7E-05 44.3 4.8 32 119-151 4-35 (482)
451 1tt5_B Ubiquitin-activating en 73.2 2.8 9.4E-05 43.7 4.5 34 117-151 40-74 (434)
452 3ldh_A Lactate dehydrogenase; 73.2 2.9 9.8E-05 41.8 4.5 31 119-150 23-55 (330)
453 2o3j_A UDP-glucose 6-dehydroge 73.2 2.6 9E-05 44.5 4.5 33 119-151 11-44 (481)
454 3ktd_A Prephenate dehydrogenas 73.1 2.9 9.9E-05 42.1 4.5 32 119-151 10-41 (341)
455 2dvm_A Malic enzyme, 439AA lon 73.0 2.7 9.3E-05 43.7 4.4 29 119-148 188-219 (439)
456 2pd4_A Enoyl-[acyl-carrier-pro 73.0 3.3 0.00011 39.8 4.9 31 120-151 9-42 (275)
457 1dlj_A UDP-glucose dehydrogena 72.9 2.6 8.9E-05 43.4 4.3 30 120-151 3-32 (402)
458 2o7s_A DHQ-SDH PR, bifunctiona 72.9 2.3 7.9E-05 45.5 4.0 31 119-150 366-396 (523)
459 1wdk_A Fatty oxidation complex 72.8 2.2 7.6E-05 47.5 3.9 32 119-151 316-347 (715)
460 3zwc_A Peroxisomal bifunctiona 72.7 2.7 9.2E-05 46.9 4.6 32 119-151 318-349 (742)
461 2ywl_A Thioredoxin reductase r 72.7 3.4 0.00012 36.7 4.5 59 319-394 60-118 (180)
462 1y6j_A L-lactate dehydrogenase 72.5 3.1 0.00011 41.3 4.6 33 118-151 8-42 (318)
463 3gvp_A Adenosylhomocysteinase 72.5 3.2 0.00011 43.0 4.7 32 118-150 221-252 (435)
464 2p4q_A 6-phosphogluconate dehy 72.4 3.3 0.00011 44.0 5.0 33 118-151 11-43 (497)
465 3p7m_A Malate dehydrogenase; p 72.4 3.7 0.00013 40.8 5.1 32 119-151 7-39 (321)
466 1cyd_A Carbonyl reductase; sho 72.1 3.6 0.00012 38.5 4.8 30 120-150 10-40 (244)
467 3vps_A TUNA, NAD-dependent epi 72.1 3.5 0.00012 40.2 4.9 33 119-152 9-42 (321)
468 4aj2_A L-lactate dehydrogenase 72.0 3.4 0.00012 41.3 4.7 32 118-150 20-53 (331)
469 3ce6_A Adenosylhomocysteinase; 71.8 3.3 0.00011 43.9 4.7 31 119-150 276-306 (494)
470 1npy_A Hypothetical shikimate 71.7 3.2 0.00011 40.3 4.3 31 119-150 121-152 (271)
471 3k31_A Enoyl-(acyl-carrier-pro 71.6 3.6 0.00012 40.2 4.8 30 120-150 33-65 (296)
472 3vku_A L-LDH, L-lactate dehydr 71.6 3.4 0.00012 41.3 4.6 31 119-150 11-43 (326)
473 3dhn_A NAD-dependent epimerase 71.5 3 0.0001 38.5 4.0 32 119-151 6-38 (227)
474 2wyu_A Enoyl-[acyl carrier pro 71.1 3.6 0.00012 39.2 4.6 31 120-151 11-44 (261)
475 3oig_A Enoyl-[acyl-carrier-pro 71.1 4.1 0.00014 38.8 5.0 30 120-150 10-42 (266)
476 2izz_A Pyrroline-5-carboxylate 71.1 3.1 0.00011 41.3 4.3 32 119-151 24-59 (322)
477 3orf_A Dihydropteridine reduct 71.1 4.4 0.00015 38.4 5.2 32 120-152 25-57 (251)
478 3pid_A UDP-glucose 6-dehydroge 71.0 3.3 0.00011 43.1 4.5 32 119-152 38-69 (432)
479 3d3w_A L-xylulose reductase; u 70.9 4.1 0.00014 38.1 4.9 30 120-150 10-40 (244)
480 2h7i_A Enoyl-[acyl-carrier-pro 70.8 3.5 0.00012 39.5 4.4 30 120-150 10-42 (269)
481 3nep_X Malate dehydrogenase; h 70.5 4.2 0.00014 40.4 4.9 31 120-151 3-35 (314)
482 1np3_A Ketol-acid reductoisome 70.5 4 0.00014 40.9 4.9 31 119-150 18-48 (338)
483 4fs3_A Enoyl-[acyl-carrier-pro 70.4 4 0.00014 38.9 4.8 31 120-151 9-42 (256)
484 2bka_A CC3, TAT-interacting pr 70.4 4.5 0.00015 37.7 5.0 32 120-152 21-55 (242)
485 2ph5_A Homospermidine synthase 70.4 3.5 0.00012 43.2 4.5 34 118-151 14-50 (480)
486 4ffl_A PYLC; amino acid, biosy 70.2 4.4 0.00015 40.7 5.2 32 120-152 4-35 (363)
487 1ff9_A Saccharopine reductase; 70.2 3.5 0.00012 43.1 4.5 31 119-150 5-35 (450)
488 1y8q_B Anthracycline-, ubiquit 70.1 3.5 0.00012 44.9 4.6 34 118-152 18-52 (640)
489 1qsg_A Enoyl-[acyl-carrier-pro 70.1 3.7 0.00013 39.2 4.4 31 120-151 12-45 (265)
490 3qvo_A NMRA family protein; st 70.0 3.3 0.00011 38.7 4.0 32 119-151 25-58 (236)
491 1yb4_A Tartronic semialdehyde 70.0 3.1 0.00011 40.4 3.9 29 119-148 5-33 (295)
492 1gpj_A Glutamyl-tRNA reductase 70.0 3.6 0.00012 42.4 4.5 32 119-151 169-201 (404)
493 3ko8_A NAD-dependent epimerase 70.0 4.4 0.00015 39.4 5.1 32 120-152 3-35 (312)
494 2dbq_A Glyoxylate reductase; D 69.9 4.4 0.00015 40.5 5.1 32 119-151 152-183 (334)
495 1uay_A Type II 3-hydroxyacyl-C 69.8 4.7 0.00016 37.5 5.0 31 120-151 5-36 (242)
496 4id9_A Short-chain dehydrogena 69.8 4.3 0.00015 40.2 5.0 32 119-151 21-53 (347)
497 1vg0_A RAB proteins geranylger 69.8 4.3 0.00015 44.4 5.3 56 316-381 379-434 (650)
498 1c1d_A L-phenylalanine dehydro 69.7 3.9 0.00013 41.3 4.6 32 118-150 176-207 (355)
499 2iz1_A 6-phosphogluconate dehy 69.7 3.7 0.00013 43.3 4.6 33 118-151 6-38 (474)
500 2axq_A Saccharopine dehydrogen 69.6 3.2 0.00011 43.6 4.1 32 119-150 25-56 (467)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=1.1e-71 Score=611.44 Aligned_cols=427 Identities=28% Similarity=0.458 Sum_probs=358.0
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC--CCccccCCcccccc-CCCCcCCcccCCCcccccCCCCCcee
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE--PFFADVPGLAPLIS-RSNIDWNYMTMPEPHACKARPNGRCY 193 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~--~~~~~~p~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~ 193 (567)
+|||||||||+|||++|.+|+++++.+|||||||+.. .....+|..+..+. ++.++|.|.+.||+. +.++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 5999999999999999999999669999999999876 34455666655544 478999999999987 6789999
Q ss_pred eeceeEeccccccceeEEecCChhhHHHHHHc-CCCCCChhhHHHHHHhhccCCCCccc-----CCCCCCCCCCCceeee
Q psy1042 194 WARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGYDEVLEYFKKSEDNEDKEIY-----HKNPEYHGKGGYQTVE 267 (567)
Q Consensus 194 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~y~~~~e~~~~~~~~-----~~~~~~~g~~G~l~~~ 267 (567)
|++|++|||+|.+|+|+|.|+.+.||+.|+++ |+.+|+|++++|||+++|++..+... ..++.+||..|++.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 99999999999999999998754210 1134589999999999
Q ss_pred cCCCCCchHHHHHHHHHhc--CCCC-CCCCCCCceeeeeeccccCCCcccchhHHhhHHHHhcCCCeEEecceEEEEEEe
Q psy1042 268 WLPYADKNLPVLIKAWKEK--GYPE-RDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTRIIC 344 (567)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~--G~~~-~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~~I~~ 344 (567)
...+..+....++++++++ |++. .+++++...|++.++.++.+|.|+++..+||.++.+ ++|++|++++.|+||++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~-r~NL~Vlt~a~V~rIl~ 236 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQS-RPNLSVLINAQVTKLVN 236 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTT-CTTEEEESSCEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhcc-CCCeEEECCCEEEEEEe
Confidence 9888888999999999999 9987 478888888999888888899999999999999988 89999999999999999
Q ss_pred CC--CC-CCCCccEEEEEEEEeC-C-EEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCC-cchhhh
Q psy1042 345 DK--TP-NKHKKLVAKSVEFFYK-K-KLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQ 418 (567)
Q Consensus 345 d~--~~-~~~~~~rv~GV~~~~~-g-~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lp-VG~nl~ 418 (567)
++ ++ + +|+||++... | +.++|+|+|+||||||+|+||+|||+|||||+++|+++||+|++||| ||+|||
T Consensus 237 ~~~~~g~~-----rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLq 311 (566)
T 3fim_B 237 SGTTNGLP-----AFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLS 311 (566)
T ss_dssp CEEETTEE-----ECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBB
T ss_pred ecCCCCCC-----EEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhh
Confidence 71 12 4 8999999874 5 78899998999999999999999999999999999999999999999 999999
Q ss_pred hccCCcceEEEccCCccccc---ch-hhhhhhhHhhhhCCCCCCCCCccceeEEEeecccC-----------CCCCCCee
Q psy1042 419 DHLTSDGIVIAFPKTATDRM---YK-KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLAD-----------SLDVPDIQ 483 (567)
Q Consensus 419 dH~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~-----------~~~~p~~~ 483 (567)
||+.+ .+.|.++.+..... .. .....+.+|+.+++||+++. ..+.++|+++.... ....||++
T Consensus 312 DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~ 389 (566)
T 3fim_B 312 DHLLL-PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTAL-IANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWE 389 (566)
T ss_dssp CCEEE-CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCC-SCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEE
T ss_pred cCccc-eEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccC-hhhheeeeccccchhhhhhhccccccCCCCCEE
Confidence 99987 57888876543221 11 23356789999999999864 47788998865210 01468888
Q ss_pred eeecCccccCCCCCCCCCCCCCCCCCCCCCcEEEEEeccccCCceEEEeeCCCCCCCCCeeeCCCCCChHHHHHHHHH-H
Q psy1042 484 FHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVAG-E 562 (567)
Q Consensus 484 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P~I~~~y~~~~~D~~~~~~~-r 562 (567)
+++.+..... .+.+.....++++.+.+++|+|||+|+|+|+||. +.|.|++|||++|.|++.|+++ |
T Consensus 390 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~-~~P~i~~~yl~~~~D~~~~~~~~~ 457 (566)
T 3fim_B 390 TIFSNQWFHP-----------AIPRPDTGSFMSVTNALISPVARGDIKLATSNPF-DKPLINPQYLSTEFDIFTMIQAVK 457 (566)
T ss_dssp EEEESSCCCT-----------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTT-SCCEEECCTTCSHHHHHHHHHHHH
T ss_pred EEecccchhh-----------cccCCCCCCEEEEEEeecCCccceEEEecCCCCC-CCceeccccCCCccHHHHHHHHHH
Confidence 7765322110 0111112357888889999999999999999999 9999999999999999999999 9
Q ss_pred HhhcC
Q psy1042 563 FATDV 567 (567)
Q Consensus 563 ~~~~~ 567 (567)
++++|
T Consensus 458 ~~~~i 462 (566)
T 3fim_B 458 SNLRF 462 (566)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
No 2
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=2e-66 Score=570.95 Aligned_cols=423 Identities=31% Similarity=0.481 Sum_probs=339.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC---CCccccCCccccccCCCCcCCcccCCCcccccCCCCCce
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPGLAPLISRSNIDWNYMTMPEPHACKARPNGRC 192 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~---~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (567)
.+|||||||||.|||++|.+|+|+++.+|||||||+.. .+...+|..+..+.++.++|.|.+.. .++.+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~--------~~r~~ 76 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTM--------VRRDD 76 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEE--------EEETT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEE--------CCccc
Confidence 57999999999999999999999944899999999873 33456777777777888999998761 23444
Q ss_pred e------eeceeEeccccccceeEEecCChhhHHHHHHcCCCCCChhhHHHHHHhhccCCCCcc-cCCCCCCCCCCCcee
Q psy1042 193 Y------WARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEI-YHKNPEYHGKGGYQT 265 (567)
Q Consensus 193 ~------~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~y~~~~e~~~~~~~-~~~~~~~~g~~G~l~ 265 (567)
. |++|++|||+|.+|+|+|.|+.+.||+.|+++|+.+|+|+++.+||++.|.+..... +..+..+|+..|++.
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 4 899999999999999999999999999999999999999999999999998865421 011123688999999
Q ss_pred eecCCCCC---chHHHHHHHHHhcCCCCC-CCCCCCceeeeeeccccCCCcccchhHHhhHHHHhcCCCeEEecceEEEE
Q psy1042 266 VEWLPYAD---KNLPVLIKAWKEKGYPER-DLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTR 341 (567)
Q Consensus 266 ~~~~~~~~---~~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~~ 341 (567)
+....+.. +....++++++++|++.. +++++...|+...+.++..|.|+++. .|+ .+ ++|++|++++.|++
T Consensus 157 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~s~~-~~l---~~-r~Nl~v~~~a~v~r 231 (577)
T 3q9t_A 157 ISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGSF-LFV---KN-KPNITIVPEVHSKR 231 (577)
T ss_dssp EEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEECCGG-GGS---SS-CTTEEEECSEEEEE
T ss_pred eeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEeeHH-HHH---hc-CCCeEEEcCcEEEE
Confidence 98876543 366778889999999874 78888888988888888888888765 343 45 78999999999999
Q ss_pred EEeCCCCCCCCccEEEEEEEEeC-CEEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCC-cchhhhh
Q psy1042 342 IICDKTPNKHKKLVAKSVEFFYK-KKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQD 419 (567)
Q Consensus 342 I~~d~~~~~~~~~rv~GV~~~~~-g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lp-VG~nl~d 419 (567)
|+++++++ +|+||++... |+.++++|+|+||||||+|+||+|||+|||||+++|+++||+|++|+| ||+||||
T Consensus 232 i~~~~~~~-----~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 232 LIINEADR-----TCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EEEETTTT-----EEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EEEeCCCC-----EEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 99985445 9999999875 888899998899999999999999999999999999999999999999 9999999
Q ss_pred ccCCcceEEEccCCcccccc----h-hhhhhhhHhhhhCCCCCCCCCccceeEEEeeccc--------------------
Q psy1042 420 HLTSDGIVIAFPKTATDRMY----K-KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLA-------------------- 474 (567)
Q Consensus 420 H~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~-------------------- 474 (567)
|+.+ .+.|.++++...... . ....++.+|+..++||+++ +..+..+|.++...
T Consensus 307 H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (577)
T 3q9t_A 307 HPGV-PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-GLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPF 384 (577)
T ss_dssp CEEE-EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-CSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSS
T ss_pred Ccce-eEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-chhheeEEeecChhhhcchhhhhhhhcccccccc
Confidence 9987 678888765432211 1 2346778999999999985 45677788765310
Q ss_pred CCCCCCCeeeeecCccccCCCCCCCCCCCCCCCCCCCCCcEEEEEeccccCCce-EEEeeCCCCCCCCCeeeCCCCCChH
Q psy1042 475 DSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRG-YIQLNATDPLWGPPLIFPKFFTKKP 553 (567)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG-~V~L~s~dp~~~~P~I~~~y~~~~~ 553 (567)
.+...|++++.+.+....... ..+.......++++.+.+++|+||| +|+|+|+||. +.|.|+||||++|.
T Consensus 385 ~~~~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~-~~P~i~p~yl~~~~ 455 (577)
T 3q9t_A 385 SPLGQPHFELDFVCMFGTAFQ--------WHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPF-QQPNINLNFFANDL 455 (577)
T ss_dssp CTTSCCSEEEEEESSCCGGGC--------SSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTT-SCCEEECCTTCSHH
T ss_pred CCCCCceEEEEeccccccccc--------ccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCC-CCceEecCcCCCcc
Confidence 011467888776543110000 0001111234688889999999999 9999999999 99999999999999
Q ss_pred HHHHHHHH-HHhhcC
Q psy1042 554 DLDVFVAG-EFATDV 567 (567)
Q Consensus 554 D~~~~~~~-r~~~~~ 567 (567)
|++.|+++ |++++|
T Consensus 456 D~~~~~~~~~~~~~i 470 (577)
T 3q9t_A 456 DIIAMREGIRFSYDL 470 (577)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 99999999 999874
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.8e-66 Score=569.35 Aligned_cols=427 Identities=26% Similarity=0.329 Sum_probs=321.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC---CCccccCCccccccCCCCcCCcccCCCcccccCCCCC
Q psy1042 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPGLAPLISRSNIDWNYMTMPEPHACKARPNG 190 (567)
Q Consensus 114 ~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~---~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 190 (567)
.+.+|||||||||.|||++|.||+|+++.+|||||||+.. .+....|..+..+.++.++|.|.+.||. +.++
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r 90 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQ 90 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCC
Confidence 3468999999999999999999999879999999999842 2233445555555678899999999886 3678
Q ss_pred ceeeeceeEeccccccceeEEecCChhhHHHHHHcCCC-CCChhhHHHHHHhhccCCCCccc------CCCCCCCCCCCc
Q psy1042 191 RCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNE-GWGYDEVLEYFKKSEDNEDKEIY------HKNPEYHGKGGY 263 (567)
Q Consensus 191 ~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~-~w~~~~l~~y~~~~e~~~~~~~~------~~~~~~~g~~G~ 263 (567)
.+.|++|++|||+|.+|+|+|.|+++.||+.|+++|+. +|+|+++++||++.|.+..+... ..++.+||.+||
T Consensus 91 ~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gp 170 (583)
T 3qvp_A 91 TALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGT 170 (583)
T ss_dssp CCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSS
T ss_pred eeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCC
Confidence 88999999999999999999999999999999999877 99999999999999998643210 123348999999
Q ss_pred eeeecC---CCCCchHHHHHHHHHhcCCCCC-CCCCCCceeeeeeccccC-CCcccchhHHhhHHHHhcCCCeEEecceE
Q psy1042 264 QTVEWL---PYADKNLPVLIKAWKEKGYPER-DLNAENQIGVMHLQTTTR-HGERLSTNGAFIRPIRKKRKNLTILTEAH 338 (567)
Q Consensus 264 l~~~~~---~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~~~~~~~-~g~r~s~~~~~L~~a~~~~~gv~I~~~t~ 338 (567)
+.+... ....+....++++++++|++.. |++++...|+..++.++. .|.|+++..+||.++++ ++|++|++++.
T Consensus 171 l~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~-r~NL~V~t~a~ 249 (583)
T 3qvp_A 171 VHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQ-RPNLQVLTGQY 249 (583)
T ss_dssp EEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTT-CTTEEEECSCE
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhc-CCCcEEEcCCE
Confidence 998876 2346788899999999999974 888888889888877764 68999999999998888 89999999999
Q ss_pred EEEEEeCCC--CCCCCccEEEEEEEE-eCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCCcch
Q psy1042 339 VTRIICDKT--PNKHKKLVAKSVEFF-YKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLKVGH 415 (567)
Q Consensus 339 V~~I~~d~~--~~~~~~~rv~GV~~~-~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lpVG~ 415 (567)
|++|+++++ ++ +|+||++. .+|+.++|+|+|+||||||+|+||+|||+|||||+++|+++||+|++|||||+
T Consensus 250 V~rIl~d~~~~~~-----ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~ 324 (583)
T 3qvp_A 250 VGKVLLSQNGTTP-----RAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGL 324 (583)
T ss_dssp EEEEEEECSSSSC-----EEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTC
T ss_pred EEEEEeccCCCCC-----EEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCcccc
Confidence 999999842 34 89999998 57888899999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCcceEEEccCCcc----cc--cc--h---hhhhhhhHhhhhCCCCCCCCCccceeEEEeecccCCCCCCCeee
Q psy1042 416 NLQDHLTSDGIVIAFPKTAT----DR--MY--K---KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQF 484 (567)
Q Consensus 416 nl~dH~~~~~~~~~~~~~~~----~~--~~--~---~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 484 (567)
|||||+.+ .+.|.++.+.. .. .. . .......+|+....++++.. ..+..+|.++ ++++.
T Consensus 325 NLqDH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~ 394 (583)
T 3qvp_A 325 NLQDQTTA-TVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEE-AVARGGFHNT--------TALLI 394 (583)
T ss_dssp CBBCCEEE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHH-HHHTTSCSCH--------HHHHH
T ss_pred chhhCccc-eEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcc-cccccCcccc--------HHHHh
Confidence 99999987 67888764311 00 00 0 01112223333222222110 0000111111 01111
Q ss_pred eecCccccCCCCCCCCCC-CCCCCCCCCCCcEEEEEeccccCCceEEEeeCCCCCCCCCee-eCCCCCChHHHHHHHHH-
Q psy1042 485 HHDPMSVRDWITNPVNAS-STNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLI-FPKFFTKKPDLDVFVAG- 561 (567)
Q Consensus 485 ~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P~I-~~~y~~~~~D~~~~~~~- 561 (567)
.+... .+..+....+ .+.+... ...+.+.+++++|+|||+|+|+|+||. +.|+| ++|||+||.|++.|+++
T Consensus 395 ~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~SrG~v~l~s~dp~-~~P~i~~~~yl~~~~D~~~~~~~~ 468 (583)
T 3qvp_A 395 QYENY---RDWIVNHNVAYSELFLDT--AGVASFDVWDLLPFTRGYVHILDKDPY-LHHFAYDPQYFLNELDLLGQAAAT 468 (583)
T ss_dssp HHHHH---HHHHHHSCCEEEEEEEEC--TTSEEEEEEESSCCCCBEEEESSSCGG-GCCEEEECCTTCSHHHHHHHHHHH
T ss_pred hhccc---hhhhccCCCCcceeeecc--CCCceeeeeecccCCceEEEecCCCCC-CCcccccCCCCCCHHHHHHHHHHH
Confidence 11000 0000000000 0000000 123444555689999999999999999 99999 99999999999999999
Q ss_pred HHhhcC
Q psy1042 562 EFATDV 567 (567)
Q Consensus 562 r~~~~~ 567 (567)
|++++|
T Consensus 469 ~~~~~i 474 (583)
T 3qvp_A 469 QLARNI 474 (583)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=4.6e-60 Score=523.83 Aligned_cols=429 Identities=27% Similarity=0.319 Sum_probs=326.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC--Cccc-cCCccccccCCCCcCCcccCCCcccccCCCCCce
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP--FFAD-VPGLAPLISRSNIDWNYMTMPEPHACKARPNGRC 192 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~--~~~~-~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (567)
.+|||||||+|++|+++|.+|++++|.+|+|||+|.... .... +|..+..+..+.++|.|.+.| . +.++.+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~----~~~~~~ 96 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--L----INNRTN 96 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--C----TTSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--C----CCCcee
Confidence 579999999999999999999994499999999998763 2223 565554455567899998877 2 467889
Q ss_pred eeeceeEeccccccceeEEecCChhhHHHHHHc-CCCCCChhhHHHHHHhhccCCCCcc------cCCCCCCCCCCCcee
Q psy1042 193 YWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGYDEVLEYFKKSEDNEDKEI------YHKNPEYHGKGGYQT 265 (567)
Q Consensus 193 ~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~y~~~~e~~~~~~~------~~~~~~~~g~~G~l~ 265 (567)
.|++|++|||+|.+|+|+|.|+.+.||+.|++. |+.+|+|++|+|||+++|+++.+.. ...++.+|+.+|++.
T Consensus 97 ~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~ 176 (587)
T 1gpe_A 97 NIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQ 176 (587)
T ss_dssp EECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEE
T ss_pred eeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEE
Confidence 999999999999999999999999999999998 9999999999999999999886521 011344788899999
Q ss_pred eecC---CCCCchHHHHHHHHHhcCCCCC-CCCCCCceeeeeecccc-CCCcccchhHHhhHHHHhcCCCeEEecceEEE
Q psy1042 266 VEWL---PYADKNLPVLIKAWKEKGYPER-DLNAENQIGVMHLQTTT-RHGERLSTNGAFIRPIRKKRKNLTILTEAHVT 340 (567)
Q Consensus 266 ~~~~---~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~~~~~~-~~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~ 340 (567)
+.++ ....+..+.|.++++++|++.. +++++...|++.++.++ ..|.|+++..+||.++.+ ++|++|++++.|+
T Consensus 177 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~-~~nl~i~~~~~v~ 255 (587)
T 1gpe_A 177 SGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQ-RSNLEILTGQMVG 255 (587)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTT-CTTEEEEESCEEE
T ss_pred EccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhc-CCCcEEEcCCEEE
Confidence 8855 3457788999999999999874 78888888888877655 378999999999987777 8999999999999
Q ss_pred EEEeCCCC--CCCCccEEEEEEEE-eCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCCcchhh
Q psy1042 341 RIICDKTP--NKHKKLVAKSVEFF-YKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLKVGHNL 417 (567)
Q Consensus 341 ~I~~d~~~--~~~~~~rv~GV~~~-~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lpVG~nl 417 (567)
+|++++++ + +|+||++. .+|+.++|+|+|+||||||+|+||+||++|||||+++|+++||+|++|+|||+||
T Consensus 256 ~l~~~~~~~~~-----~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL 330 (587)
T 1gpe_A 256 KVLFKQTASGP-----QAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINM 330 (587)
T ss_dssp EEEEEEETTEE-----EEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSB
T ss_pred EEEECCCCCCC-----EEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcch
Confidence 99997422 3 89999998 6788889999779999999999999999999999999999999999999999999
Q ss_pred hhccCCcceEEEccCCcccccch-hhhhhhhHhhhhCCCCCCCCCccceeEEEeecccCC--C--C--CCCeeeeecCcc
Q psy1042 418 QDHLTSDGIVIAFPKTATDRMYK-KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADS--L--D--VPDIQFHHDPMS 490 (567)
Q Consensus 418 ~dH~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~--~--~--~p~~~~~~~~~~ 490 (567)
|||+.+ .+.+.++++....... .......+|...++||++.. ..+..+|.+...... . . .|+++.++....
T Consensus 331 ~DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (587)
T 1gpe_A 331 QDQTTT-TVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLL-NTKLDQWAEETVARGGFHNVTALKVQYENYRNWLL 408 (587)
T ss_dssp BCCEEE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHH-HHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHH
T ss_pred hcCccc-ceEEEeCCCcccccchHHHHHHHHHHHhCCCCCcccc-ccceeeEeecccccccccccccccccHHHHhhhcc
Confidence 999987 5777776542211111 11123445655556665421 122223333211000 0 0 122222211000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcEEEEEeccccCCceEEEeeCCCCCCCCC-eeeCCCCCChHHHHHHHHH-HHhhcC
Q psy1042 491 VRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPP-LIFPKFFTKKPDLDVFVAG-EFATDV 567 (567)
Q Consensus 491 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P-~I~~~y~~~~~D~~~~~~~-r~~~~~ 567 (567)
..+. . .. +.++.+ ...+++.+.+++|.|||+|+|+|+||. +.| .|+++|+.+|.|++.|+++ |++++|
T Consensus 409 -~~~~--~-~~-~~~~~~---~~~~~~~~~~~~P~srG~V~L~s~dp~-~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i 478 (587)
T 1gpe_A 409 -DEDV--A-FA-ELFMDT---EGKINFDLWDLIPFTRGSVHILSSDPY-LWQFANDPKFFLNEFDLLGQAAASKLARDL 478 (587)
T ss_dssp -HSCC--E-EE-EEEEEC---TTEEEEEEEESSCCCCBEEEESSSCGG-GTCEEEECCTTSSHHHHHHHHHHHHHHHHH
T ss_pred -CCCC--c-ce-eeeecC---CCcEEEEEEecCCccceeEEeCCCCcc-cCccEeecccCCChHHHHHHHHHHHHHHHH
Confidence 0000 0 00 000011 235677788899999999999999999 999 9999999999999999999 998864
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=4.3e-58 Score=503.63 Aligned_cols=404 Identities=29% Similarity=0.452 Sum_probs=316.5
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC-CccccCCccccccCCCCcCCcccCCCcccccCCCCCcee
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP-FFADVPGLAPLISRSNIDWNYMTMPEPHACKARPNGRCY 193 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~-~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 193 (567)
..+|||||||||++||++|.||||++|++|||||||+... .....|..+..+.++.++|.|.+.|+.. +.++.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~ 90 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHH 90 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCE
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEe
Confidence 3579999999999999999999996689999999998753 3345566666777889999999999887 5688899
Q ss_pred eeceeEeccccccceeEEecCChhhHHHHHHc-CCCCCChhhHHHHHHhhccCCCCcccCCCCCCCCCCCceeeecCCC-
Q psy1042 194 WARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPY- 271 (567)
Q Consensus 194 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~- 271 (567)
|++|++|||+|.+|+|+|.|+.+.||+.|++. ++.+|+|+++++||+++|...... ...++..|+..+.....
T Consensus 91 ~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~-----~~~~~~~g~~~~~~~~~~ 165 (526)
T 3t37_A 91 WARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGG-----DGIHGKGGPLPIHLPADE 165 (526)
T ss_dssp ECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTT-----SSSSCSSCSEECBCCSTT
T ss_pred ccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCC-----ccccCcCCCcCccccccc
Confidence 99999999999999999999999999999775 788999999999999999876542 22567778877655433
Q ss_pred CCchHHHHHHHHHhcCCCCC-CCCCCCceeeeeeccccCCCcccchhHHhhHHHHhcCCCeEEecceEEEEEEeCCCCCC
Q psy1042 272 ADKNLPVLIKAWKEKGYPER-DLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTRIICDKTPNK 350 (567)
Q Consensus 272 ~~~~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~ 350 (567)
..++.+.+.++++++|++.. +.+.....+++.+...+..|.|.++..+++.++.+.++|++|++++.|++|+++ ++
T Consensus 166 ~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~--~~- 242 (526)
T 3t37_A 166 VSPLARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE--GN- 242 (526)
T ss_dssp SCHHHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE--TT-
T ss_pred CCHHHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec--CC-
Confidence 36778889999999999874 566666667777777777888999888887655432799999999999999998 45
Q ss_pred CCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCC-cchhhhhccCCcceEEE
Q psy1042 351 HKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSDGIVIA 429 (567)
Q Consensus 351 ~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lp-VG~nl~dH~~~~~~~~~ 429 (567)
+++||++...+....+.| |+||||||+|+||+|||+||||++.+|+++||++++|+| ||+|||||+......|.
T Consensus 243 ----~a~gv~~~~~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~ 317 (526)
T 3t37_A 243 ----QVRSLEVVGRQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYA 317 (526)
T ss_dssp ----EEEEEEEEETTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEE
T ss_pred ----eEEEEEEEecCceEEEee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEe
Confidence 899999998888888999 589999999999999999999999999999999999999 99999999865333333
Q ss_pred ccCCcccccchhhhhhhhHhhhhCCCCCCCCCccceeEEEeecccCCCCCCCeeeeecCccccCCCCCCCCCCCCCCCCC
Q psy1042 430 FPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPF 509 (567)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 509 (567)
...+. +.......+...+.+.........|++++.+.......+ . +...
T Consensus 318 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~ 366 (526)
T 3t37_A 318 ARKPV---------------------PPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSE-----S-----FPAP 366 (526)
T ss_dssp ESSCC---------------------CCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCT-----T-----SCCC
T ss_pred ccCCc---------------------chHhhcchhhhhhhhcccccccCCcceeeeccccccccc-----c-----cccc
Confidence 33321 111111123334443322111145666554432211111 1 1111
Q ss_pred CCCCcEEEEEeccccCCceEEEeeCCCCCCCCCeeeCCCCCChHHHHHHHHH-HHhhcC
Q psy1042 510 AYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVAG-EFATDV 567 (567)
Q Consensus 510 ~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P~I~~~y~~~~~D~~~~~~~-r~~~~~ 567 (567)
.....+++...+++|.|||+|+|+|+||. +.|.|+++|++++.|++.++++ |.+++|
T Consensus 367 ~~~~~~~~~~~l~~p~srG~v~~~s~dp~-~~p~i~~~~~~~~~d~~~~~~~~~~~r~i 424 (526)
T 3t37_A 367 AAGSAYSLLFGITHPTSRGSVRISGPELG-DRLIIDPAYLQTGRDRERFRRALEASRTI 424 (526)
T ss_dssp CTTSEEEEEEEESSCCCCBEEECSSSSTT-SCCEEECCTTCSHHHHHHHHHHHHHHHHH
T ss_pred cCCcceeeeccccCccccCcceeccCCCc-cCceeccccCCCHHHHHHHHHHHHHHHHH
Confidence 12356778888999999999999999999 9999999999999999999999 988763
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=9.1e-58 Score=501.86 Aligned_cols=404 Identities=32% Similarity=0.487 Sum_probs=327.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC--ccccCCccccccCCCCcCCcccCCCcccccCCCCCcee
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF--FADVPGLAPLISRSNIDWNYMTMPEPHACKARPNGRCY 193 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~--~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 193 (567)
.+|||||||+|.+|+++|.+|++++|.+|+|||+|..... ....|..+....++..+|.|.+.|++. .++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 5799999999999999999999977899999999987643 234454443344567899999888764 467889
Q ss_pred eeceeEeccccccceeEEecCChhhHHHHHH-cCCCCCChhhHHHHHHhhccCCCCcccCCCCCCCCCCCceeeecCCCC
Q psy1042 194 WARGKVMGGSSTINYMIYARGNAEDYDEWEA-MGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYA 272 (567)
Q Consensus 194 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~-~g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~ 272 (567)
|++|++|||+|.+|+|+|.|+.+.||+.|++ +|+.+|+|++++|||+++|+..... .+..+|+..|++.+..+...
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~---~~~~~~g~~Gpl~v~~~~~~ 163 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG---PDAPHHGDSGPVHLMNVPPK 163 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB---TTBTTSCBSCSEEEEECCSC
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC---CccccCCCCCCEEEecCCCC
Confidence 9999999999999999999999999999998 7889999999999999999987621 11237888899998877677
Q ss_pred CchHHHHHHHHHhcCCCCCCCCCCC--ceeeeeeccccC-CCcccchhHHhhHHHHhcCCCeEEecceEEEEEEeCCCCC
Q psy1042 273 DKNLPVLIKAWKEKGYPERDLNAEN--QIGVMHLQTTTR-HGERLSTNGAFIRPIRKKRKNLTILTEAHVTRIICDKTPN 349 (567)
Q Consensus 273 ~~~~~~~~~~~~~~G~~~~~~~~~~--~~g~~~~~~~~~-~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~ 349 (567)
.+..+.+.++++++|++..++++.. ..|+..++.+|. +|.|+++..+||.++.+ +.|++|++++.|++|+++++ +
T Consensus 164 ~~~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~-~~~~~i~~~~~V~~i~~~~~-~ 241 (546)
T 2jbv_A 164 DPTGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVE-QENFTLLTGLRARQLVFDAD-R 241 (546)
T ss_dssp CHHHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTT-CTTEEEECSCEEEEEEECTT-S
T ss_pred CHHHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhc-CCCcEEEeCCEEEEEEECCC-C
Confidence 7888999999999999877777766 778888888888 89999999999998877 79999999999999999732 5
Q ss_pred CCCccEEEEEEEEeC--CEEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCC-cchhhhhccCCcce
Q psy1042 350 KHKKLVAKSVEFFYK--KKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSDGI 426 (567)
Q Consensus 350 ~~~~~rv~GV~~~~~--g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lp-VG~nl~dH~~~~~~ 426 (567)
+++||++.+. |+.++|+|+|+||||||+|+||+||++|||||+++|+++||++++|+| ||+|||||+.+ .+
T Consensus 242 -----~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~-~~ 315 (546)
T 2jbv_A 242 -----RCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEG-VV 315 (546)
T ss_dssp -----BEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEC-CE
T ss_pred -----eEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccc-eE
Confidence 8999999876 778899997799999999999999999999999999999999999999 99999999998 57
Q ss_pred EEEccCCcccccchhhhhhhhHhhhhCCCCCCCCCccceeEEEeecccCCCCCCCeeeeecCccccCCCCCCCCCCCCCC
Q psy1042 427 VIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNM 506 (567)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~~~~~~~~~~ 506 (567)
.+.++.+... + . . ...+..+|.+..... ..|++++.+.+......... .+.
T Consensus 316 ~~~~~~~~~~------------~---~----~--~~~~~~~f~~~~~~~--~~p~~~~~~~~~~~~~~~~~-~g~----- 366 (546)
T 2jbv_A 316 QFEAKQPMVA------------E---S----T--QWWEIGIFTPTEDGL--DRPDLMMHYGSVPFDMNTLR-HGY----- 366 (546)
T ss_dssp EEEESSCCCS------------C---C----S--SSCCEEEEECSSTTC--SSCSEEEEEESSCCCTTTGG-GTC-----
T ss_pred EEEecCCCcc------------c---c----c--chhheEEEEecCCCC--CCCceEEEeccccccccccc-cCc-----
Confidence 7777654110 0 0 1 123445666653222 46888877654322100000 010
Q ss_pred CCCCCCCcEEEEEeccccCCceEEEeeCCCCCCCCCeeeCCCCCChH--HHHHHHHH-HHhhcC
Q psy1042 507 SPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKP--DLDVFVAG-EFATDV 567 (567)
Q Consensus 507 ~~~~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P~I~~~y~~~~~--D~~~~~~~-r~~~~~ 567 (567)
+ .....+++.+.+++|.|||+|+|+|+||+ +.|.|+++|+++|. |++.|+++ |++++|
T Consensus 367 -~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~-~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i 427 (546)
T 2jbv_A 367 -P-TTENGFSLTPNVTHARSRGTVRLRSRDFR-DKPMVDPRYFTDPEGHDMRVMVAGIRKAREI 427 (546)
T ss_dssp -C-CCSSEEEEEEEETTCCCCBEEECSSSCTT-SCCEEECCTTCCTTCHHHHHHHHHHHHHHHH
T ss_pred -c-CCCCeEEEEEEEcccCcccEEEecCCCCC-CCceecccccCCCchhHHHHHHHHHHHHHHH
Confidence 0 11245777778899999999999999999 99999999999999 99999999 988764
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.9e-49 Score=434.82 Aligned_cols=371 Identities=26% Similarity=0.346 Sum_probs=256.8
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC--CccccCCccccccCCCCcCCcccCCCcccccCCCCCce
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP--FFADVPGLAPLISRSNIDWNYMTMPEPHACKARPNGRC 192 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~--~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (567)
..+|||||||||++||++|.+|++ |.+|||||||+... .....+..+..... ...| |.+.+|.. +.++.+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~~q~~----~~~~~~ 95 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ-QEDD-GKTPVERF----VSEDGI 95 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH-SCCC-SSSSEEEE----ECTTSC
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc-CCCc-CcCCCccc----cCCCcc
Confidence 357999999999999999999999 89999999998642 22222222111111 1124 45555543 345677
Q ss_pred eeeceeEeccccccceeEEecCChhhHHHHHHcCCCCCChhhHHHHHHhhccCCCCcccCCCCCCCCCCCceeeecCCCC
Q psy1042 193 YWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYA 272 (567)
Q Consensus 193 ~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~ 272 (567)
.+++|++|||+|.+|+|+|.|+.+.||+.+ | .+|.|+++.+||+++|+.+... +..
T Consensus 96 ~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~--------------------~~~ 151 (536)
T 1ju2_A 96 DNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK--------------------PNS 151 (536)
T ss_dssp EEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC--------------------CCC
T ss_pred eeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC--------------------CCC
Confidence 889999999999999999999999999632 2 3499999999999999854320 112
Q ss_pred CchHHHHHHHHHhcCCCCC-C----CCCCCceeeeeeccccCCCcccchhHHhhHHHHhcCCCeEEecceEEEEEEeCCC
Q psy1042 273 DKNLPVLIKAWKEKGYPER-D----LNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTRIICDKT 347 (567)
Q Consensus 273 ~~~~~~~~~~~~~~G~~~~-~----~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~ 347 (567)
.+....+.++++++|++.. . ...+...|.+. .+.+|.|+++.. |+.. ++ +.|++|++++.|++|+++++
T Consensus 152 ~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~---~~~~g~r~s~~~-~~~~-~~-~~~~~v~~~~~v~~i~~~~~ 225 (536)
T 1ju2_A 152 QSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGST---FDNKGTRHAADE-LLNK-GN-SNNLRVGVHASVEKIIFSNA 225 (536)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEES---BCTTSBBCCGGG-GGGG-SC-TTTEEEEESCEEEEEEECCS
T ss_pred CcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEE---ECCCCeEecHHH-hhhh-hc-CCCcEEEeCCEEEEEEECCC
Confidence 3556788899999998542 1 11111112111 124678887776 6655 45 78999999999999999852
Q ss_pred -CCCCCccEEEEEEEEe-CCEEEEEE--cCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCC-cchhhhhccC
Q psy1042 348 -PNKHKKLVAKSVEFFY-KKKLRRAR--AKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLT 422 (567)
Q Consensus 348 -~~~~~~~rv~GV~~~~-~g~~~~v~--A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lp-VG~nl~dH~~ 422 (567)
++ +|+||++.+ +|+.++++ +.|+||||||+|+||+||++||||+.++|+++||++++|+| ||+|||||+.
T Consensus 226 ~~~-----~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~ 300 (536)
T 1ju2_A 226 PGL-----TATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPR 300 (536)
T ss_dssp SSC-----BEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEE
T ss_pred CCC-----EEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcc
Confidence 23 899999986 56666664 55799999999999999999999999999999999999999 9999999997
Q ss_pred CcceEEEccCCcccccch-hhhhhhhHhhhhCCCCCCCCCccceeEEEeecccCCCCCCCeeeeecCccccCCCCCCCCC
Q psy1042 423 SDGIVIAFPKTATDRMYK-KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNA 501 (567)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~~~~~ 501 (567)
+ .+.+.++.+....... ... ..+|...+.|+++. ..+ ++.+.+ .+.
T Consensus 301 ~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~------------------~~~--~~~~~~----~~~------ 347 (536)
T 1ju2_A 301 N-FINILPPNPIEPTIVTVLGI--SNDFYQCSFSSLPF------------------TTP--PFGFFP----SSS------ 347 (536)
T ss_dssp E-EEEECCSSCCCCCCCCEEEE--CSSEEEEEEEECCC------------------SSC--CBTTBS----SSC------
T ss_pred e-eEEEEeCCCcccccchhhhH--HHHHHHcCCCCCCC------------------Chh--hheeec----Ccc------
Confidence 6 5666655432110000 000 00122222222210 001 000000 000
Q ss_pred CCCCCCCCCCCCcEEEEEeccccCCceEEEe-eCCCCCCCCCeeeCCCCCChHHHHHHHHH-HHhhcC
Q psy1042 502 SSTNMSPFAYYDGITVRPILLKPKSRGYIQL-NATDPLWGPPLIFPKFFTKKPDLDVFVAG-EFATDV 567 (567)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~P~SrG~V~L-~s~dp~~~~P~I~~~y~~~~~D~~~~~~~-r~~~~~ 567 (567)
.+++......+...+++|.|||+|+| +|+||. +.|.|+++|+++|.|++.|+++ |++++|
T Consensus 348 -----~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~-~~P~i~~~y~~~~~D~~~~~~~~~~~~~i 409 (536)
T 1ju2_A 348 -----YPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVR-VSPNVKFNYYSNLTDLSHCVSGMKKIGEL 409 (536)
T ss_dssp -----CCCCSSCEEEEEEEESSCSCCEEEECSCSSCTT-SCCEECCCTTCSHHHHHHHHHHHHHHHHH
T ss_pred -----cCCCCcceEEEeeecCCCCcceEEEeCCCCCcc-cCceecccccCCccHHHHHHHHHHHHHHH
Confidence 01111122234556789999999999 999999 9999999999999999999999 998764
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.7e-45 Score=405.35 Aligned_cols=404 Identities=22% Similarity=0.263 Sum_probs=274.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCCcc--ccCCccc--c---ccCCCCcC-CcccCCCcccccCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFA--DVPGLAP--L---ISRSNIDW-NYMTMPEPHACKAR 187 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~--~~p~~~~--~---~~~~~~~~-~~~~~p~~~~~~~~ 187 (567)
.+|||||||||++|+++|.+|+++ |++|+|||+|+...... .....+. . ....+..+ .....+... .
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~ 80 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPF----W 80 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCT----T
T ss_pred CceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCcc----c
Confidence 569999999999999999999998 99999999997542110 0000000 0 00000000 000000000 0
Q ss_pred CCCceeeeceeEeccccccceeEEecCChhhHHH---HHHcCCCCCChhhHHHHHHhhccCCCCcccCCCCCCCCCCCce
Q psy1042 188 PNGRCYWARGKVMGGSSTINYMIYARGNAEDYDE---WEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQ 264 (567)
Q Consensus 188 ~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~---w~~~g~~~w~~~~l~~y~~~~e~~~~~~~~~~~~~~~g~~G~l 264 (567)
......+.+|++|||+|.+|+|++.|+.+.||+. | ..+|+|++ +||++.|....... .+...|+
T Consensus 81 ~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~~~------~~~~~g~- 147 (546)
T 1kdg_A 81 WCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPSTD------HPSTDGQ- 147 (546)
T ss_dssp BCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCCBS------CCSTTSC-
T ss_pred cccccccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCCCc------cCCCCCC-
Confidence 0123456789999999999999999999999987 8 35788888 99999988643211 2222332
Q ss_pred eeecCCCCCchHHHHHHHHHhcCCCCCCCC-C--CCceeeeeeccccCCCcccchhHHhhHHHHhcCCCeEEecceEEEE
Q psy1042 265 TVEWLPYADKNLPVLIKAWKEKGYPERDLN-A--ENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTR 341 (567)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~--~~~~g~~~~~~~~~~g~r~s~~~~~L~~a~~~~~gv~I~~~t~V~~ 341 (567)
.+..+....+.++++++|++..+.+ . ....|+..++..+.+|.|.++..+|+.++.+ ++|++|++++.|++
T Consensus 148 -----~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~-~~~~~i~~~~~V~~ 221 (546)
T 1kdg_A 148 -----RYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALA-RPNFTFKTNVMVSN 221 (546)
T ss_dssp -----CCSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHT-CTTEEEECSCCEEE
T ss_pred -----ccCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhh-CCCcEEEeCCEEEE
Confidence 1234566788889999998653322 1 1344666777777889999999899999887 78999999999999
Q ss_pred EEeCCCCCCCCccEEEEEEEEe--CCE--EEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhc------CCccc---
Q psy1042 342 IICDKTPNKHKKLVAKSVEFFY--KKK--LRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSL------NIKTL--- 408 (567)
Q Consensus 342 I~~d~~~~~~~~~rv~GV~~~~--~g~--~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~------gI~v~--- 408 (567)
|+++ ++ +|+||++.+ +|+ ..++.+.|+||||||+++||+||++||||++++|+++ ||+++
T Consensus 222 i~~~--~~-----~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~ 294 (546)
T 1kdg_A 222 VVRN--GS-----QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQN 294 (546)
T ss_dssp EEEE--TT-----EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGG
T ss_pred EEEe--CC-----EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCccccccc
Confidence 9997 45 899999876 354 3345455799999999999999999999999999999 69985
Q ss_pred --ccCCcchhhhhccCCcceEEEccCCc-ccccc-----hhhhhhhhHhhhhCCCCCCCCCccceeEEEeecccCCCCCC
Q psy1042 409 --VDLKVGHNLQDHLTSDGIVIAFPKTA-TDRMY-----KKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVP 480 (567)
Q Consensus 409 --~~lpVG~nl~dH~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p 480 (567)
+|+|||+|||||+.+ .+.|. .+.. ..... ........+|+..++||++... .. ..+++.........+
T Consensus 295 ~~~dlpVG~nL~DH~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~~~~~~~~ 370 (546)
T 1kdg_A 295 QWINLPVGMNAQDNPSI-NLVFT-HPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGAS-PK-LNFWRAYSGSDGFTR 370 (546)
T ss_dssp GCBCCCTTTTBBCCCCE-EEEEE-CTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCS-CC-EEEEEEEECTTSCEE
T ss_pred ccccCCcccCcccCcce-eEEEe-cCCcccccchhhhhcchhHHHHHHHHHcCCcccccCC-cc-eEEEEccCCCCcchh
Confidence 899999999999987 56666 3222 11110 0112345678888899987532 22 345554322100112
Q ss_pred CeeeeecCccccCCCCCCCCCCCCCCCCCCCCCcEEEEEecccc-CCceEEEeeCCCCCCCCCeeeCCCCCChHHHHHHH
Q psy1042 481 DIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKP-KSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFV 559 (567)
Q Consensus 481 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~SrG~V~L~s~dp~~~~P~I~~~y~~~~~D~~~~~ 559 (567)
+++..+.+...... + ..+......+++.+.+++| .|||+|+|+|+| ..|.|+++|+++|.|++.|+
T Consensus 371 ~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~---~~~~i~~~y~~~~~D~~~~~ 437 (546)
T 1kdg_A 371 YAQGTVRPGAASVN-----S-----SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL---RGTVLTPPWLVNPVDKTVLL 437 (546)
T ss_dssp EEEEEEEESCSCCC-----C-----SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC---CEEEEECCTTCSHHHHHHHH
T ss_pred hhhheecccccccc-----c-----ccccCCCCeEEEEeeecCCCCCCceEecCCCC---CCCcccccccCCchHHHHHH
Confidence 23322222110000 0 0111123467788888898 999999999988 35789999999999999999
Q ss_pred HH-HHhhcC
Q psy1042 560 AG-EFATDV 567 (567)
Q Consensus 560 ~~-r~~~~~ 567 (567)
++ |.++++
T Consensus 438 ~~~~~~~~~ 446 (546)
T 1kdg_A 438 QALHDVVSN 446 (546)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
Confidence 99 998875
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=2.4e-42 Score=376.21 Aligned_cols=368 Identities=16% Similarity=0.102 Sum_probs=258.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC-c--cccCCccccccCCCCcCCcccCCCc-----------
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF-F--ADVPGLAPLISRSNIDWNYMTMPEP----------- 181 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~-~--~~~p~~~~~~~~~~~~~~~~~~p~~----------- 181 (567)
.+||+||||+|++|+++|.+|++. |.+|+|||+|..... . ...+... .......+|.+.+.|+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 569999999999999999999997 999999999985431 1 1222111 12233578998887762
Q ss_pred ---ccccC----CCCCceeeeceeEeccccccceeEEecCChhhHHHHHHcCCCCCChhhHH-HHHHhhccCCCCcccCC
Q psy1042 182 ---HACKA----RPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVL-EYFKKSEDNEDKEIYHK 253 (567)
Q Consensus 182 ---~~~~~----~~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~y~~~~e~~~~~~~~~~ 253 (567)
..+.. ..++.+.|++|++|||+|.+|+|+|.|+.+.||+.|. .+|.|++|+ |||+++|+++.+..
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~--- 154 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNH--- 154 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBC---
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCC---
Confidence 11111 1567789999999999999999999999999999995 679999999 99999999765421
Q ss_pred CCCCCCCCCceeeecCCCCCchHHHHHHHHHhcCC-----CCC-CCCCC---------CceeeeeeccccCCCcccchhH
Q psy1042 254 NPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGY-----PER-DLNAE---------NQIGVMHLQTTTRHGERLSTNG 318 (567)
Q Consensus 254 ~~~~~g~~G~l~~~~~~~~~~~~~~~~~~~~~~G~-----~~~-~~~~~---------~~~g~~~~~~~~~~g~r~s~~~ 318 (567)
.+ +..+ ...+ ..+..+.+.++++++|+ +.. ++++. ....++.|...|.+| |.++..
T Consensus 155 ~~------~~~~-~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~ 225 (504)
T 1n4w_A 155 ID------TKWF-EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDK 225 (504)
T ss_dssp CC------HHHH-HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTT
T ss_pred CC------cccc-cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHH
Confidence 00 0000 0000 13466788999999998 432 33211 112223344567889 999999
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CC---EEEEEEcCcEEEEcCCCCccHHHHHhCC-
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KK---KLRRARAKKEVISSAGAINSPKILMLSG- 393 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g---~~~~v~A~k~VVLAAGa~~Tp~LLl~SG- 393 (567)
+||.++.+ +.|++|++++.|++|+++++++ +++||++.+ +| +..+++|+ +||||||+|+||+||++||
T Consensus 226 ~~l~~a~~-~~n~~i~~~~~V~~i~~~~~g~-----~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ 298 (504)
T 1n4w_A 226 TYLAAALG-TGKVTIQTLHQVKTIRQTKDGG-----YALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARD 298 (504)
T ss_dssp THHHHHHH-TTSEEEEESEEEEEEEECTTSS-----EEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-cCCcEEEeCCEEEEEEECCCCC-----EEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccc
Confidence 99998887 7889999999999999985444 899999985 55 56789995 9999999999999999999
Q ss_pred CCCcchhhhcCCcccccCCcchhhhhccCCcceEEEccCCcccccchhhhhhhhHhhhhCCCCCCCCCccceeEEEeecc
Q psy1042 394 IGPKDHLTSLNIKTLVDLKVGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKL 473 (567)
Q Consensus 394 IG~~~~L~~~gI~v~~~lpVG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~ 473 (567)
|| ||+++.+ .||+||+||+.+ .+.+..... ...|++.. .....++.+...
T Consensus 299 ig--------~i~~~~~-~VG~nl~dh~~~-~~~~~~~~~------------------~~~~~~~~--~~~~~~~~~~~~ 348 (504)
T 1n4w_A 299 TG--------TLPNLNS-EVGAGWGPNGNI-MTARANHMW------------------NPTGAHQS--SIPALGIDAWDN 348 (504)
T ss_dssp TT--------SSTTCCT-TTTCCBBCTTCE-EEEEECCTT------------------CCCCSCCC--SSCCEEEEECCS
T ss_pred cC--------CCCCCCh-hhccccccCCcc-eeeeccCCC------------------CcccCcCC--CccEEEEeccCC
Confidence 98 6776643 299999999975 333332110 01233321 122334444321
Q ss_pred cCCCCCCCeeeeecCccccCCCCCCCCCCCCCCCCCCCCCcEEEEEeccccCCceEEEeeCCCCCCCCCeeeCCCCCChH
Q psy1042 474 ADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKP 553 (567)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P~I~~~y~~~~~ 553 (567)
. ..|++++.+. . +.. +. ..+.++..+++|.|||+|+|+|+|| .|+++|+.++
T Consensus 349 -~--~~~~~~~~~~---~----------~~~----~~--~~~~~~~~~~~p~srG~V~L~s~~~-----~i~~~~~~~~- 400 (504)
T 1n4w_A 349 -S--DSSVFAEIAP---M----------PAG----LE--TWVSLYLAITKNPQRGTFVYDAATD-----RAKLNWTRDQ- 400 (504)
T ss_dssp -S--TTCEEEEEEC---C----------CCS----SC--CCEEEEEEEECCCCCBCEEEETTTT-----EEEECCCGGG-
T ss_pred -C--CCceEEEecc---C----------ChH----HH--hhhhhheeeeccCCCcEEEecCCCC-----ceEeccCCCc-
Confidence 1 3465544431 0 000 11 3455666778899999999999775 6899999999
Q ss_pred HHHHHHHH-H-HhhcC
Q psy1042 554 DLDVFVAG-E-FATDV 567 (567)
Q Consensus 554 D~~~~~~~-r-~~~~~ 567 (567)
| +.|+++ | ++++|
T Consensus 401 D-~~~~~~~~~~~~~i 415 (504)
T 1n4w_A 401 N-APAVNAAKALFDRI 415 (504)
T ss_dssp G-HHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHHH
Confidence 9 788888 7 77653
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=8.9e-41 Score=363.96 Aligned_cols=366 Identities=15% Similarity=0.111 Sum_probs=253.1
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCCccccCC---ccccc-cCCCCcCCcccCCCccc-------
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPG---LAPLI-SRSNIDWNYMTMPEPHA------- 183 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~~~p~---~~~~~-~~~~~~~~~~~~p~~~~------- 183 (567)
..+||+||||+|++|+++|.+|++. |.+|+|||+|..... ..|. +.... .....+|.|.+.||...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 4679999999999999999999997 999999999975431 1221 11111 23457899988886210
Q ss_pred ----ccCC------CCCceeeeceeEeccccccceeEEecCChhhHHHHHHcCCCCCChhhHH-HHHHhhccCCCCcccC
Q psy1042 184 ----CKAR------PNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVL-EYFKKSEDNEDKEIYH 252 (567)
Q Consensus 184 ----~~~~------~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~y~~~~e~~~~~~~~~ 252 (567)
.... .++.+.|++|++|||+|.+|+|+|.|+.+.||+.|. .+|.|++|+ |||+++|+++.+..
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~-- 159 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNN-- 159 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBC--
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCC--
Confidence 0112 467788999999999999999999999999999995 478999999 99999999876521
Q ss_pred CCCCCCCCCCceeeecCCC-CCchHHHHHHHHHhcCC-----CCC-CCCCCC---------ceeeeeeccccCCCcccch
Q psy1042 253 KNPEYHGKGGYQTVEWLPY-ADKNLPVLIKAWKEKGY-----PER-DLNAEN---------QIGVMHLQTTTRHGERLST 316 (567)
Q Consensus 253 ~~~~~~g~~G~l~~~~~~~-~~~~~~~~~~~~~~~G~-----~~~-~~~~~~---------~~g~~~~~~~~~~g~r~s~ 316 (567)
.+ .... ... ..+....+.++++++|+ +.. ++++.. ...++.|...|..| |+++
T Consensus 160 -~~------~~~~---~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~ 228 (507)
T 1coy_A 160 -ID------QAWF---ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSL 228 (507)
T ss_dssp -CC------HHHH---HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCT
T ss_pred -CC------Cccc---cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcCh
Confidence 00 0000 011 13466788999999999 442 332211 11223344567889 9999
Q ss_pred hHHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CC---EEEEEEcCcEEEEcCCCCccHHHHHhC
Q psy1042 317 NGAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KK---KLRRARAKKEVISSAGAINSPKILMLS 392 (567)
Q Consensus 317 ~~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g---~~~~v~A~k~VVLAAGa~~Tp~LLl~S 392 (567)
..+||.++.+ +.|++|++++.|++|++++++. +|+||++.+ +| +.++++|+ +||||||+|+||+||++|
T Consensus 229 ~~~~l~~a~~-~~n~~i~~~~~v~~i~~~~~g~-----~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~S 301 (507)
T 1coy_A 229 DKTYLAQAAA-TGKLTITTLHRVTKVAPATGSG-----YSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSM 301 (507)
T ss_dssp TTTHHHHHHH-TTCEEEECSEEEEEEEECSSSS-----EEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCCcEEEeCCEEEEEEECCCCC-----EEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhc
Confidence 9999999888 7899999999999999985334 799999986 55 46789995 999999999999999999
Q ss_pred C-CCCcchhhhcCCcccccCC-cchhhhhccCCcceEEEccCCcccccchhhhhhhhHhhhhCCCCCCCCCccceeEEEe
Q psy1042 393 G-IGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAK 470 (567)
Q Consensus 393 G-IG~~~~L~~~gI~v~~~lp-VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~ 470 (567)
| ||. ||.. .+ ||+||+||+.. ...+... .| ...|++.... . ..++..
T Consensus 302 g~iG~--------lpnl--~d~VG~~l~~h~~~-~~~~~~~----------------~~--~~~~~~~~~~-~-~~~~~~ 350 (507)
T 1coy_A 302 KAQGH--------LPNL--SSQVGEGWGNNGNI-MVGRANH----------------MW--DATGSKQATI-P-TMGIDN 350 (507)
T ss_dssp HHTTS--------STTS--CTTTTCCBBCTTEE-EEEEECC----------------TT--SCCCSCCCSS-C-CEEEEC
T ss_pred ccCCC--------CCcc--ChhhCCccccCCcc-ccccccc----------------cc--ccccccCCCc-c-eEEEec
Confidence 9 983 3311 23 99999999863 1111100 01 2334443211 1 111111
Q ss_pred ecccCCCCCCCeeeeecCccccCCCCCCCCCCCCCCCCCCCCCcEEEEEeccccCCceEEEeeCCCCCCCCCeeeCCCCC
Q psy1042 471 TKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFT 550 (567)
Q Consensus 471 ~~~~~~~~~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~V~L~s~dp~~~~P~I~~~y~~ 550 (567)
.. +. ..|++++.+. . . .. + ...+.++..+++|.|||+|+|+|+|| .|+++|+.
T Consensus 351 ~~--~~-~~~~~~~~~~-~-----~---~~-----~-----~~~~~~~~~~~~p~s~G~V~L~s~~~-----~i~~~~~~ 403 (507)
T 1coy_A 351 WA--DP-TAPIFAEIAP-L-----P---AG-----L-----ETYVSLYLAITKNPERARFQFNSGTG-----KVDLTWAQ 403 (507)
T ss_dssp TT--CT-TSCEEEEEEC-C-----C---CS-----S-----CCCEEEEEEEECCCCCBCEEEETTTT-----EEEECCCG
T ss_pred cC--CC-CCCcEEEecc-C-----C---HH-----H-----hhheeeeEEEeeeCCCcEEEEccCCC-----ceeeccCC
Confidence 11 11 2455544331 0 0 00 0 13455556678899999999998764 89999999
Q ss_pred ChHHHHHHHHH-H-HhhcC
Q psy1042 551 KKPDLDVFVAG-E-FATDV 567 (567)
Q Consensus 551 ~~~D~~~~~~~-r-~~~~~ 567 (567)
++ | ..|+++ + .+++|
T Consensus 404 ~~-D-~~~~~~~~~~~~~i 420 (507)
T 1coy_A 404 SQ-N-QKGIDMAKKVFDKI 420 (507)
T ss_dssp GG-G-HHHHHHHHHHHHHH
T ss_pred CC-c-HHHHHHHHHHHHHH
Confidence 99 9 567777 6 77653
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.96 E-value=1.5e-28 Score=273.18 Aligned_cols=322 Identities=15% Similarity=0.165 Sum_probs=171.7
Q ss_pred ccccCccccccccCCCCccCCCccCCCCCcccCC-CCccccCCCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 73 SHILGDTFLKAYDNTGHKKRPEQSNEGYDKDHKN-NNREEQDDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+.|..+|+. ++.+.++...++........+... .......+...|||||||||++|+++|..|++. |++|+|||++.
T Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~ 79 (623)
T 3pl8_A 2 STSSSDPFF-NFAKSSFRSAAAQKASASSLPPLPGPDKKVPGMDIKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGE 79 (623)
T ss_dssp ---------------------------------------------CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CCCCCCCcc-cccccccccCccccchhccCCCCCCCCcccccccccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccC
Confidence 344445444 477778777777655444332222 122222344679999999999999999999998 99999999987
Q ss_pred CCCCccccCCcccc-----------------ccC-------------CCCcCCcccCCCcccccCCCCCcee----eece
Q psy1042 152 EEPFFADVPGLAPL-----------------ISR-------------SNIDWNYMTMPEPHACKARPNGRCY----WARG 197 (567)
Q Consensus 152 ~~~~~~~~p~~~~~-----------------~~~-------------~~~~~~~~~~p~~~~~~~~~~~~~~----~~~g 197 (567)
.......-...... ... ....|......-...+. .....+. ...+
T Consensus 80 ~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~v~l~~g~~-~~~~~~~~l~~~~~~ 158 (623)
T 3pl8_A 80 IDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSN-PEQDPLRNLSGQAVT 158 (623)
T ss_dssp CCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCCCCCSCTTSCCCSSCCSCTTCC-TTCCTTSCCTTCEEC
T ss_pred CCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccccccccccccccCcEEeccCCC-cccccchhhhhhccc
Confidence 65421100000000 000 00011110000000000 0000011 1245
Q ss_pred eEeccccccceeEEecCChhhHHHHHHcCCCCC---ChhhHHHHHHhhccCCCCcccCCCCCCCCCCCceeeecCCCCCc
Q psy1042 198 KVMGGSSTINYMIYARGNAEDYDEWEAMGNEGW---GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADK 274 (567)
Q Consensus 198 ~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w---~~~~l~~y~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~~~ 274 (567)
..+||.+.+|.+...|..+.+- +. -..+| .+.++.++|.+.+....... + .+...
T Consensus 159 ~~vGG~~~~~~g~~~r~~~~e~--~~--~l~~~~v~~~~~l~~~~~~~~~l~~vgg-----------~-------~~~~~ 216 (623)
T 3pl8_A 159 RVVGGMSTAWTCATPRFDREQR--PL--LVKDDADADDAEWDRLYTKAESYFQTGT-----------D-------QFKES 216 (623)
T ss_dssp CSTTGGGGTCCCBCCCCCGGGS--CC--SSTTCHHHHHHHHHHHHHHHHHHHTEES-----------C-------TTTTC
T ss_pred ccccCcceeeccccccCChHHh--hh--hhcccCccChhhHHHHHHHHHHhccccc-----------c-------cccCc
Confidence 6789999999998888876531 10 01222 34667888888776654321 0 01111
Q ss_pred hH-HHHHHHHHhcCCCCCCCCCCCceeeeeeccccCCCcccchhHHhhHHH------HhcCCCeEEecceEEEEEEeCCC
Q psy1042 275 NL-PVLIKAWKEKGYPERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPI------RKKRKNLTILTEAHVTRIICDKT 347 (567)
Q Consensus 275 ~~-~~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~a------~~~~~gv~I~~~t~V~~I~~d~~ 347 (567)
.. ......+.........+.. ........ .....|+++..++|... .+ ++|++|++++.|++|+.+++
T Consensus 217 ~~~~~~~~~l~~~~~~~~~~~~-~p~a~~~~---~~~~~r~s~~~~~l~~~~~l~~~~~-~~nv~v~~~~~V~~i~~~~~ 291 (623)
T 3pl8_A 217 IRHNLVLNKLTEEYKGQRDFQQ-IPLAATRR---SPTFVEWSSANTVFDLQNRPNTDAP-EERFNLFPAVACERVVRNAL 291 (623)
T ss_dssp HHHHHHHHHHHHHTTTTSCCEE-CCEEEEEE---ETTEEEECCHHHHCCCCCEEETTEE-EEEEEEECSEEEEEEEECTT
T ss_pred cccccchHHHHHhhhhcccccc-cchhhccC---CCCccccchHHhhhhhhhcchhhcc-CCCEEEEeCCEEEEEEEECC
Confidence 11 1112222221110000000 00000000 01234566667777665 44 57999999999999999754
Q ss_pred CCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCCcchhhhcCCcccccCC-cchhhhhccCCc
Q psy1042 348 PNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSD 424 (567)
Q Consensus 348 ~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~~~~L~~~gI~v~~~lp-VG~nl~dH~~~~ 424 (567)
++ +++||++.+ +|+.+++.|+ +||||+|++.+|+||++||||+..+|+.+||++ ++| ||+||+||+.+
T Consensus 292 ~~-----~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~- 362 (623)
T 3pl8_A 292 NS-----EIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLV- 362 (623)
T ss_dssp SS-----CEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE-
T ss_pred CC-----EEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCc-
Confidence 44 899999986 5778889995 899999999999999999999999999999999 999 99999999987
Q ss_pred ceEEEccCC
Q psy1042 425 GIVIAFPKT 433 (567)
Q Consensus 425 ~~~~~~~~~ 433 (567)
.+.|.+++.
T Consensus 363 ~~~~~~~~~ 371 (623)
T 3pl8_A 363 FCQTVMSTE 371 (623)
T ss_dssp EEEEEECHH
T ss_pred eEEEEECCc
Confidence 677777643
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.65 E-value=2.3e-15 Score=163.72 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=51.9
Q ss_pred HHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCc-cHHHHH
Q psy1042 318 GAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAIN-SPKILM 390 (567)
Q Consensus 318 ~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~-Tp~LLl 390 (567)
...|...++ +.|++|+++++|++|+.+++ + +|+||++.++++..+|+|+|.||||+|++. ++.+|.
T Consensus 205 ~~~L~~~~~-~~Gv~i~~~t~v~~L~~~~~-g-----~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 205 MKPLVETAE-KLGVRAEYDMRVQTLVTDDT-G-----RVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHHH-HTTCEEECSEEEEEEEECTT-C-----CEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHH-HcCCEEEecCEeEEEEECCC-C-----cEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 334444444 47999999999999998743 4 899999998888889999658999999998 455543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.47 E-value=3.9e-13 Score=147.99 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=47.7
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CCEEEEEEcCcEEEEcCCCCccHH
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPK 387 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g~~~~v~A~k~VVLAAGa~~Tp~ 387 (567)
.|...+. +.|++|+++++|++|+.+++ + +|+||++.. +|+..+|+| +.||||+|++...+
T Consensus 255 ~L~~~~~-~~gv~i~~~~~v~~l~~~~~-g-----~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 255 TLRKAAK-EQGIDTRLNSRVVKLVVNDD-H-----SVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHH-HTTCCEECSEEEEEEEECTT-S-----BEEEEEEEETTTEEEEEEE-EEEEECCCCCTTCH
T ss_pred HHHHHHH-hcCCEEEeCCEEEEEEECCC-C-----cEEEEEEEeCCCcEEEEEc-CEEEEecCCcccCH
Confidence 4444444 57999999999999998732 5 899999985 677778999 58999999998643
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.44 E-value=9.6e-13 Score=145.07 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=47.7
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CCEEEEEEcCcEEEEcCCCCccH
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g~~~~v~A~k~VVLAAGa~~Tp 386 (567)
..|...+. +.|++|+++++|++|+.+++ + +|+||++.. +|+..+|.|+ .||||+|++...
T Consensus 259 ~~L~~~~~-~~gv~i~~~~~v~~l~~~~~-g-----~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n 319 (571)
T 1y0p_A 259 QVLYDNAV-KRNIDLRMNTRGIEVLKDDK-G-----TVKGILVKGMYKGYYWVKAD-AVILATGGFAKN 319 (571)
T ss_dssp HHHHHHHH-HTTCEEESSEEEEEEEECTT-S-----CEEEEEEEETTTEEEEEECS-EEEECCCCCTTC
T ss_pred HHHHHHHH-hcCCEEEeCCEeeEeEEcCC-C-----eEEEEEEEeCCCcEEEEECC-eEEEeCCCcccC
Confidence 34444444 57999999999999998732 4 799999987 7777789996 699999998753
No 15
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.32 E-value=3.5e-11 Score=133.17 Aligned_cols=56 Identities=14% Similarity=0.212 Sum_probs=45.7
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCcc
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 385 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~T 385 (567)
|...+. +.|++|++++.|++|+.+ ++ +|+||.+.+ +|+...+.|+ .||||+|++..
T Consensus 161 L~~~~~-~~gv~i~~~~~v~~Li~~--~g-----~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSL-RYDTSYFVEYFALDLLME--NG-----ECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHHHT-TSCCEEEETEEEEEEEEE--TT-----EEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHH-hCCCEEEEceEEEEEEEE--CC-----EEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 444444 589999999999999986 45 899999874 6777789995 89999999874
No 16
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.31 E-value=4.4e-11 Score=131.97 Aligned_cols=57 Identities=9% Similarity=0.144 Sum_probs=44.5
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCcc
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 385 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~T 385 (567)
|...+. +.|++|++++.|++|+.++ ++ +|+||.+.+ +|+..++.|+ .||||+|++..
T Consensus 149 L~~~~~-~~gv~i~~~~~v~~L~~~~-~g-----~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNL-KNHTTIFSEWYALDLVKNQ-DG-----AVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHHHHH-HTTCEEEETEEEEEEEECT-TS-----CEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHH-hCCCEEEeCcEEEEEEECC-CC-----EEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 333334 4799999999999999863 24 799999874 5777789995 89999999864
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.31 E-value=3e-11 Score=134.58 Aligned_cols=50 Identities=10% Similarity=0.074 Sum_probs=42.5
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCcc
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 385 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~T 385 (567)
+.|++|++++.|++|+.+ ++ +|+||.+.+ +|+...+.|+ .||||+|++..
T Consensus 170 ~~gv~i~~~~~v~~L~~~--~g-----~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 170 KLGVSIQDRKEAIALIHQ--DG-----KCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHTCEEECSEEEEEEEEE--TT-----EEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred hCCCEEEECcEEEEEEec--CC-----EEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 479999999999999986 35 899998874 5777789995 89999999874
No 18
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.30 E-value=5.4e-11 Score=131.00 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=48.3
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CCEEEEEEcCcEEEEcCCCCcc-HHHHH
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINS-PKILM 390 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g~~~~v~A~k~VVLAAGa~~T-p~LLl 390 (567)
.|...+. +.|++|+++++|++|+.+++ + +|+||++.. +|+..+|.| +.||||+|++.. +.+|.
T Consensus 260 ~L~~~~~-~~gv~i~~~t~v~~l~~~~~-g-----~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 260 VLWDNAV-KRGTDIRLNSRVVRILEDAS-G-----KVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHH-HTTCEEESSEEEEEEEEC---C-----CEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHHH
T ss_pred HHHHHHH-HcCCeEEecCEEEEEEECCC-C-----eEEEEEEEeCCCcEEEEEc-CEEEEeCCCCccCHHHHH
Confidence 4444444 47999999999999988732 4 799999985 677778999 489999999974 45543
No 19
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.30 E-value=5.5e-12 Score=130.19 Aligned_cols=64 Identities=11% Similarity=0.066 Sum_probs=45.5
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhC-CCC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLS-GIG 395 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~S-GIG 395 (567)
|...++ +.|++|+++++|++|..+++ .+..|.+. +|+..+++|+ .||+|+|++ +++|+... |+.
T Consensus 156 l~~~~~-~~Gv~i~~~~~v~~i~~~~~-------~~~~v~~~-~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 156 YQGDAE-SDGAQLVFHTPLIAGRVRPE-------GGFELDFG-GAEPMTLSCR-VLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEECTT-------SSEEEEEC-TTSCEEEEEE-EEEECCGGG-HHHHHHTEETSC
T ss_pred HHHHHH-HCCCEEECCCEEEEEEEcCC-------ceEEEEEC-CCceeEEEeC-EEEECCCcc-hHHHHHHhcCCC
Confidence 333444 57999999999999998742 22345443 4544578996 799999975 88888877 764
No 20
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.27 E-value=6.1e-11 Score=129.57 Aligned_cols=52 Identities=15% Similarity=0.274 Sum_probs=42.6
Q ss_pred CCCeEEecceEEEEEEeCCCC-----CCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCcc
Q psy1042 328 RKNLTILTEAHVTRIICDKTP-----NKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 385 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~-----~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~T 385 (567)
..|++|++++.|++|+.++++ + +|+||.+.+ +|+..++.|+ .||||+|++..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~-----~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTR-----RVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSC-----BEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCC-----EEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 479999999999999984323 2 689999885 6777789995 89999999864
No 21
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.25 E-value=1.6e-11 Score=127.85 Aligned_cols=61 Identities=20% Similarity=0.182 Sum_probs=45.0
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
|...+. +.|++|+++++|++|..+ ++ +++||++. +| +++|+ .||+|+|++ ++.|+...|+.
T Consensus 155 l~~~~~-~~Gv~i~~~~~v~~i~~~--~~-----~v~gv~~~-~g---~i~a~-~VV~A~G~~-s~~l~~~~g~~ 215 (382)
T 1y56_B 155 FAVKAK-EYGAKLLEYTEVKGFLIE--NN-----EIKGVKTN-KG---IIKTG-IVVNATNAW-ANLINAMAGIK 215 (382)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEES--SS-----BEEEEEET-TE---EEECS-EEEECCGGG-HHHHHHHHTCC
T ss_pred HHHHHH-HCCCEEECCceEEEEEEE--CC-----EEEEEEEC-Cc---EEECC-EEEECcchh-HHHHHHHcCCC
Confidence 333444 579999999999999886 34 68888753 22 68996 699999975 67777766653
No 22
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.25 E-value=2.5e-11 Score=125.97 Aligned_cols=35 Identities=34% Similarity=0.545 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|++|+ + |++|+||||++.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~ 42 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQ 42 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCC
Confidence 4689999999999999999999 6 999999999754
No 23
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.24 E-value=5.5e-11 Score=124.62 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=44.7
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
|...+. +.|++|+++++|++|..+ ++ ++++|++. +| ++.|+ .||+|+|++ ++.|+...|+.
T Consensus 180 l~~~~~-~~g~~i~~~~~v~~i~~~--~~-----~~~~v~~~-~g---~~~a~-~vV~a~G~~-s~~l~~~~g~~ 240 (405)
T 2gag_B 180 FARKAN-EMGVDIIQNCEVTGFIKD--GE-----KVTGVKTT-RG---TIHAG-KVALAGAGH-SSVLAEMAGFE 240 (405)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEES--SS-----BEEEEEET-TC---CEEEE-EEEECCGGG-HHHHHHHHTCC
T ss_pred HHHHHH-HCCCEEEcCCeEEEEEEe--CC-----EEEEEEeC-Cc---eEECC-EEEECCchh-HHHHHHHcCCC
Confidence 444444 479999999999999886 34 67777754 33 58895 799999974 66777766653
No 24
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.22 E-value=4.6e-11 Score=133.10 Aligned_cols=50 Identities=16% Similarity=0.293 Sum_probs=41.6
Q ss_pred CeEEecceEEEEEEeCCC-CCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCcc
Q psy1042 330 NLTILTEAHVTRIICDKT-PNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 385 (567)
Q Consensus 330 gv~I~~~t~V~~I~~d~~-~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~T 385 (567)
|++|+.++.|++|+.+++ .+ +|+||.+.+ +|+...|+|+ .||||+|++..
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g-----~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPN-----RIAGAVGFNLRANEVHIFKAN-AMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTT-----BEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccc-----eEEEEEEEEcCCCcEEEEEeC-EEEECCCcccc
Confidence 999999999999998753 14 799998764 5777889995 89999999873
No 25
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.20 E-value=3.3e-10 Score=118.60 Aligned_cols=36 Identities=28% Similarity=0.485 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++||||||||++|+++|+.|+++ |++|+||||+..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 469999999999999999999999 999999999754
No 26
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.19 E-value=6.3e-10 Score=123.01 Aligned_cols=51 Identities=18% Similarity=0.242 Sum_probs=42.1
Q ss_pred CCC-eEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccH
Q psy1042 328 RKN-LTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 328 ~~g-v~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp 386 (567)
+.+ ++|++++.|++|+.+ ++ +|+||.+.+ +|+..++.|+ .||||+|++...
T Consensus 146 ~~gnv~i~~~~~v~~l~~~--~g-----~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVD--DG-----HVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp TCTTEEEEETEEEEEEEEE--TT-----EEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred hCCCcEEEeCCEEEEEEEe--CC-----EEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 345 999999999999987 35 899998764 6777789996 699999998654
No 27
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.18 E-value=1.5e-10 Score=128.99 Aligned_cols=59 Identities=20% Similarity=0.213 Sum_probs=44.7
Q ss_pred hhHHHHhcCC-Ce-EEecceEEEEEEeCCCC-CCCCccEEEEEEEE--eCCEEEEEEcCcEEEEcCCCCcc
Q psy1042 320 FIRPIRKKRK-NL-TILTEAHVTRIICDKTP-NKHKKLVAKSVEFF--YKKKLRRARAKKEVISSAGAINS 385 (567)
Q Consensus 320 ~L~~a~~~~~-gv-~I~~~t~V~~I~~d~~~-~~~~~~rv~GV~~~--~~g~~~~v~A~k~VVLAAGa~~T 385 (567)
.|...+. +. |+ +|++++.|++|+.++++ + +|+||.+. .+|+...|.| +.||||+|++..
T Consensus 156 ~l~~~~~-~~~gv~~i~~~~~v~~L~~~~~~~g-----~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 156 IIAEAAK-MAVGEENIYERVFIFELLKDNNDPN-----AVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp HHHHHHH-HHHCGGGEECSEEEEEEEECTTCTT-----BEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred HHHHHHH-hcCCCcEEEecCEEEEEEEcCCccc-----eeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 4444444 34 89 99999999999987421 3 69999875 3566678999 589999999875
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.17 E-value=1e-10 Score=124.17 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=34.5
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIEE 153 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~~ 153 (567)
..+|||||||||++|+++|++|+++ |+ +|+||||+...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYPVP 42 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSCSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCCCC
Confidence 3569999999999999999999999 99 99999998653
No 29
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.16 E-value=7.1e-10 Score=121.96 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=47.4
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
+.|++|+++|+|++|..+ ++ +++||++.+ +++..+|+|+ .||+|||++ +..|+...|+
T Consensus 200 ~~Ga~i~~~t~V~~l~~~--~~-----~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 200 EDGAYLVSKMKAVGFLYE--GD-----QIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HTTCEEESSEEEEEEEEE--TT-----EEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCCS
T ss_pred HcCCeEEeccEEEEEEEe--CC-----EEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhcc
Confidence 479999999999999987 44 799999876 4555679996 699999975 7888776654
No 30
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.16 E-value=1.7e-10 Score=132.57 Aligned_cols=60 Identities=22% Similarity=0.116 Sum_probs=44.9
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
|...+. +.|++|+++++|++|..+ ++ ++++|.+.+ | +++|+ .||+|+|++ ++.|+...|+
T Consensus 157 L~~~a~-~~Gv~i~~~t~V~~i~~~--~~-----~v~~V~t~~-G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTE-SAGVTYRGSTTVTGIEQS--GG-----RVTGVQTAD-G---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEEE--TT-----EEEEEEETT-E---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHH-HcCCEEECCceEEEEEEe--CC-----EEEEEEECC-c---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 333444 479999999999999876 34 677887533 2 68996 799999975 6788777765
No 31
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.14 E-value=4.4e-10 Score=123.36 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=49.7
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
+.|++|+++++|++|..+ ++ +++||++.+ +|+..+++|+ .||+|+|+ ++..|+...|+.
T Consensus 182 ~~G~~i~~~~~V~~l~~~--~g-----~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 182 ARGAVALNYMKVESFIYD--QG-----KVVGVVAKDRLTDTTHTIYAK-KVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HTTCEEEESEEEEEEEEE--TT-----EEEEEEEEETTTCCEEEEEEE-EEEECCGG-GHHHHHHTTTCC
T ss_pred HcCCEEEcCCEEEEEEEc--CC-----eEEEEEEEEcCCCceEEEECC-EEEECCCc-chHHHHHhcCCC
Confidence 479999999999999987 45 899999986 5666789995 79999996 588888888775
No 32
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.13 E-value=9.1e-11 Score=125.29 Aligned_cols=55 Identities=18% Similarity=0.164 Sum_probs=41.8
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccH
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp 386 (567)
.|...++ +.|++|+++++|++|..+ ++ ++.+|++.+ |+ +++|+ .||+|+|++..|
T Consensus 139 ~L~~~~~-~~GV~i~~~~~V~~i~~~--~~-----~v~~V~~~~-G~--~i~Ad-~VVlAtGg~s~~ 193 (447)
T 2i0z_A 139 ALLTRLK-DLGVKIRTNTPVETIEYE--NG-----QTKAVILQT-GE--VLETN-HVVIAVGGKSVP 193 (447)
T ss_dssp HHHHHHH-HTTCEEECSCCEEEEEEE--TT-----EEEEEEETT-CC--EEECS-CEEECCCCSSSG
T ss_pred HHHHHHH-HCCCEEEeCcEEEEEEec--CC-----cEEEEEECC-CC--EEECC-EEEECCCCCcCC
Confidence 3444444 579999999999999876 34 778887653 43 58996 699999998765
No 33
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.10 E-value=1.7e-10 Score=123.00 Aligned_cols=34 Identities=35% Similarity=0.596 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCC-CeEEEEecC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAG 150 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G 150 (567)
.+|||||||||++|+++|++|++. | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 469999999999999999999999 9 999999993
No 34
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.08 E-value=2.4e-09 Score=111.39 Aligned_cols=35 Identities=37% Similarity=0.508 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
+|||||||||++|+++|++|+++ |++|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 58999999999999999999999 999999999754
No 35
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.07 E-value=5.5e-10 Score=125.50 Aligned_cols=36 Identities=31% Similarity=0.362 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|++|+++ |++|+||||+..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR-GWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 349999999999999999999999 999999998643
No 36
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.02 E-value=3.1e-09 Score=110.37 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=44.1
Q ss_pred HHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccH
Q psy1042 318 GAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 318 ~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp 386 (567)
..+|...+. +.|++++.+++|+.+..+ ++ ++++|....++...+++|+ -||-|.| .+|.
T Consensus 105 ~~~L~~~a~-~~G~~~~~~~~v~~~~~~--~~-----~~~~v~~~~~~~~~~~~a~-~vIgAdG-~~S~ 163 (397)
T 3oz2_A 105 DKHLAALAA-KAGADVWVKSPALGVIKE--NG-----KVAGAKIRHNNEIVDVRAK-MVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHH-HHTCEEESSCCEEEEEEE--TT-----EEEEEEEEETTEEEEEEEE-EEEECCC-TTCH
T ss_pred HHHHHHHHH-hcCcEEeeeeeeeeeeec--cc-----eeeeeeecccccceEEEEe-EEEeCCc-cccH
Confidence 334544444 579999999999999887 45 7899988888888899994 4555555 5554
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.01 E-value=5.7e-10 Score=125.58 Aligned_cols=36 Identities=28% Similarity=0.194 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++||||||||++|+++|++|+++ |++|+|||++..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~ 298 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQ 298 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCc
Confidence 469999999999999999999999 999999999754
No 38
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.00 E-value=2.5e-09 Score=106.96 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+|||||||||++|+++|+.|++.+|.+|+|||+.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 4689999999999999999999944999999999754
No 39
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.00 E-value=1.6e-10 Score=120.16 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
+.+|||||||||++|+++|++|++. |++|+|||++..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~ 51 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTM 51 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 3579999999999999999999998 999999999753
No 40
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.97 E-value=5.3e-09 Score=106.62 Aligned_cols=37 Identities=35% Similarity=0.595 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
.+|||||||||++|+++|+.|++. +|++|+|||++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 469999999999999999999995 6999999998754
No 41
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.96 E-value=4.5e-09 Score=110.95 Aligned_cols=38 Identities=29% Similarity=0.400 Sum_probs=33.1
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
...|||||||||++|+++|..|++. |.+|+|||+++..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~ 62 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAP 62 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 4579999999999999999999999 9999999998653
No 42
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.96 E-value=9.1e-09 Score=106.41 Aligned_cols=35 Identities=31% Similarity=0.546 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
+|||||||||++|+++|++|+++ |++|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 48999999999999999999999 999999999754
No 43
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.96 E-value=8.5e-09 Score=111.60 Aligned_cols=53 Identities=19% Similarity=0.095 Sum_probs=42.6
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
+.|++|+++++|++|..+ + ++.+|.+.+ +|+..+++|+ .||+|+|++ +..|+.
T Consensus 161 ~~Gv~i~~~~~V~~l~~~--~------~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARRE--N------GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HTTCEEECSEEEEEEEEE--T------TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HcCCEEEcCcEEEEEEEe--C------CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 479999999999999876 2 367888874 5666689996 699999975 677765
No 44
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.93 E-value=9.1e-09 Score=110.49 Aligned_cols=31 Identities=32% Similarity=0.329 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
||||||||++|+++|++|++. |.+|+||||+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC
Confidence 899999999999999999998 9999999997
No 45
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.93 E-value=1e-08 Score=106.89 Aligned_cols=67 Identities=13% Similarity=0.193 Sum_probs=49.3
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCC
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 396 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~ 396 (567)
.+|...+. +.|++|+.+++|++|..+ ++ +++||.+...+...++.|+ .||.|+|.. | .+....|+..
T Consensus 106 ~~L~~~~~-~~gv~i~~~~~v~~i~~~--~~-----~v~gv~~~~~~~~~~~~a~-~vV~A~G~~-s-~~~~~~g~~~ 172 (397)
T 3cgv_A 106 KHLAALAA-KAGADVWVKSPALGVIKE--NG-----KVAGAKIRHNNEIVDVRAK-MVIAADGFE-S-EFGRWAGLKS 172 (397)
T ss_dssp HHHHHHHH-HHTCEEESSCCEEEEEEE--TT-----EEEEEEEEETTEEEEEEEE-EEEECCCTT-C-HHHHHHTCCT
T ss_pred HHHHHHHH-hCCCEEEECCEEEEEEEe--CC-----EEEEEEEEECCeEEEEEcC-EEEECCCcc-h-HhHHhcCCCc
Confidence 34554444 479999999999999887 44 7999998876666789995 799999964 4 4444445544
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.91 E-value=4.1e-09 Score=114.68 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|+.|++. |++|+|||++..
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~ 141 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKE 141 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCc
Confidence 458999999999999999999998 999999999854
No 47
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.88 E-value=6.3e-09 Score=109.74 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=44.3
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
|...+. +.|++|+++++|++|..+ ++ +++||.+. |+ ++.|+ .||+|+++..+.+||.
T Consensus 202 l~~~~~-~~G~~i~~~~~V~~i~~~--~~-----~~~gv~~~--g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVIS-ANGGKIHTGQEVSKILIE--NG-----KAAGIIAD--DR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEEE--TT-----EEEEEEET--TE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHHHH-HcCCEEEECCceeEEEEE--CC-----EEEEEEEC--CE--EEECC-EEEECCCHHHHHHhcC
Confidence 444444 579999999999999987 45 78888763 43 68896 7999999988887664
No 48
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.81 E-value=5.1e-09 Score=114.72 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..|||||||||.+|+.||..||+. |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecc
Confidence 359999999999999999999998 99999999873
No 49
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.80 E-value=4.7e-09 Score=115.42 Aligned_cols=35 Identities=40% Similarity=0.528 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+|||||||||++|+.||..||+. |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 469999999999999999999998 99999999863
No 50
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.80 E-value=5e-08 Score=102.44 Aligned_cols=36 Identities=33% Similarity=0.457 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
+|||||||||++|+++|++|++. |.+|+|||+++..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKKI 39 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 58999999999999999999999 9999999998653
No 51
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.79 E-value=1.8e-08 Score=108.64 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=39.7
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
|...++ +.|++|+++++|++|+.+ ++ +++||++.++. ++.|+ .||++|+...+-+.|+
T Consensus 227 L~~~~~-~~Gg~I~~~~~V~~I~~~--~~-----~~~gV~~~~g~---~~~ad-~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 227 MIKLFQ-DLGGEVVLNARVSHMETT--GN-----KIEAVHLEDGR---RFLTQ-AVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEEE--TT-----EEEEEEETTSC---EEECS-CEEECCC---------
T ss_pred HHHHHH-HhCCceeeecceeEEEee--CC-----eEEEEEecCCc---EEEcC-EEEECCCHHHHHHHhc
Confidence 444445 589999999999999988 45 89999887652 68896 6999999888877665
No 52
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.79 E-value=3.4e-08 Score=105.40 Aligned_cols=57 Identities=12% Similarity=0.136 Sum_probs=44.2
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCc
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAIN 384 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~ 384 (567)
..|...+. +.|++|+++++|++|..+ ++ +++||.+.. +|+..+++|+ .||.|+|+..
T Consensus 104 ~~L~~~a~-~~gv~i~~~~~v~~i~~~--~~-----~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s 162 (453)
T 3atr_A 104 QRVLKEAQ-DRGVEIWDLTTAMKPIFE--DG-----YVKGAVLFNRRTNEELTVYSK-VVVEATGYSR 162 (453)
T ss_dssp HHHHHHHH-HTTCEEESSEEEEEEEEE--TT-----EEEEEEEEETTTTEEEEEECS-EEEECCGGGC
T ss_pred HHHHHHHH-HcCCEEEeCcEEEEEEEE--CC-----EEEEEEEEEcCCCceEEEEcC-EEEECcCCch
Confidence 34444444 479999999999999876 44 789998875 6776789996 7999999644
No 53
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.75 E-value=6.8e-08 Score=104.77 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=44.9
Q ss_pred HHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CCEEEEEEcCcEEEEcCCCCc
Q psy1042 318 GAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAIN 384 (567)
Q Consensus 318 ~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g~~~~v~A~k~VVLAAGa~~ 384 (567)
..+|...+. +.|++|+.+++|++|..+ ++ +++||.+.. +|+..+++|+ .||.|+|...
T Consensus 114 ~~~L~~~a~-~~Gv~i~~~~~V~~v~~~--~~-----~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~S 172 (512)
T 3e1t_A 114 DDMLLRNSE-RKGVDVRERHEVIDVLFE--GE-----RAVGVRYRNTEGVELMAHAR-FIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHH-HTTCEEESSCEEEEEEEE--TT-----EEEEEEEECSSSCEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHH-hCCCEEEcCCEEEEEEEE--CC-----EEEEEEEEeCCCCEEEEEcC-EEEECCCcch
Confidence 345555555 589999999999999986 45 799998875 4666689995 7999999754
No 54
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.74 E-value=6.7e-08 Score=106.48 Aligned_cols=70 Identities=9% Similarity=0.049 Sum_probs=48.5
Q ss_pred HHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-----CCEE-------EEEEcCcEEEEcCCCCcc
Q psy1042 318 GAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-----KKKL-------RRARAKKEVISSAGAINS 385 (567)
Q Consensus 318 ~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-----~g~~-------~~v~A~k~VVLAAGa~~T 385 (567)
..+|...+. +.|++|+++++|++|+.+++ + +++||.+.+ +|+. .+++|+ .||+|.|+...
T Consensus 147 ~~~L~~~a~-~~Gv~i~~g~~v~~l~~~~~-g-----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~S~ 218 (584)
T 2gmh_A 147 VSWMGEQAE-ALGVEVYPGYAAAEILFHED-G-----SVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHH-HTTCEEETTCCEEEEEECTT-S-----SEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTTCH
T ss_pred HHHHHHHHH-HcCCEEEcCCEEEEEEEcCC-C-----CEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCCch
Confidence 344555444 46999999999999998753 3 688888763 3432 478995 79999998764
Q ss_pred H--HHHHhCCCC
Q psy1042 386 P--KILMLSGIG 395 (567)
Q Consensus 386 p--~LLl~SGIG 395 (567)
- +|+...|+.
T Consensus 219 vr~~l~~~~gl~ 230 (584)
T 2gmh_A 219 LAKQLYKKFDLR 230 (584)
T ss_dssp HHHHHHHHTTTT
T ss_pred HHHHHHHHhCCC
Confidence 2 444444554
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.73 E-value=6.6e-08 Score=106.50 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=47.3
Q ss_pred HHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 318 GAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 318 ~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
..+|...+. +.|++|+.+++|++|..++ + .+++|.+..+|...++.|+ .||.|+|. .|. +....|+
T Consensus 131 ~~~L~~~a~-~~Gv~i~~g~~V~~v~~~~--g-----~~~~V~~~~~G~~~~i~Ad-lVV~AdG~-~S~-lr~~lg~ 196 (591)
T 3i3l_A 131 DKLLLDEAR-SRGITVHEETPVTDVDLSD--P-----DRVVLTVRRGGESVTVESD-FVIDAGGS-GGP-ISRKLGV 196 (591)
T ss_dssp HHHHHHHHH-HTTCEEETTCCEEEEECCS--T-----TCEEEEEEETTEEEEEEES-EEEECCGG-GCH-HHHHHTC
T ss_pred HHHHHHHHH-hCCCEEEeCCEEEEEEEcC--C-----CEEEEEEecCCceEEEEcC-EEEECCCC-cch-hHHHcCC
Confidence 344555555 5899999999999998762 3 4678888777777789996 79999996 443 3333344
No 56
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.70 E-value=6.3e-08 Score=98.10 Aligned_cols=38 Identities=32% Similarity=0.432 Sum_probs=33.7
Q ss_pred CCcccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
..+|||||||||++|+++|+.|++. +|++|+|+|+...
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 3568999999999999999999985 4899999998754
No 57
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.70 E-value=4.9e-08 Score=104.09 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=37.6
Q ss_pred CCCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 113 DDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 113 ~~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
.++.+|||||||+|.+|+++|++|+++ |++|+||||++..+.
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGG 57 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCC
Confidence 456789999999999999999999999 999999999987653
No 58
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.68 E-value=1.1e-07 Score=99.96 Aligned_cols=35 Identities=34% Similarity=0.520 Sum_probs=32.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+|||||||||++|+++|+.|++. |.+|+|||+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 359999999999999999999998 99999999874
No 59
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.63 E-value=2e-07 Score=98.30 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=32.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
||||||||++|+++|++|+++ |++|+||||.+..+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~G 36 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIG 36 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 899999999999999999999 99999999987654
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.61 E-value=6.2e-08 Score=106.47 Aligned_cols=37 Identities=30% Similarity=0.565 Sum_probs=32.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 114 ~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
....|||||||||.+|+.||..||+. |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 34569999999999999999999999 99999999863
No 61
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.60 E-value=1.3e-06 Score=95.06 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++||||||||++|+++|+.|++. |.+|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 469999999999999999999999 999999999754
No 62
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.59 E-value=5.9e-07 Score=97.03 Aligned_cols=39 Identities=33% Similarity=0.460 Sum_probs=34.7
Q ss_pred CCCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 113 DDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 113 ~~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++.++||||||+|++|+++|..|++. |.+|+||||.+.
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 45 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVE 45 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 345779999999999999999999999 999999998643
No 63
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.57 E-value=3.1e-08 Score=104.08 Aligned_cols=37 Identities=35% Similarity=0.532 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
.++||||||||++|+++|+.|+++ ||++|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 469999999999999999999995 5999999999743
No 64
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.53 E-value=2.6e-07 Score=94.32 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.|||||||||++|+++|..|++. |++|+|||+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 48999999999999999999999 999999998754
No 65
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.52 E-value=1.2e-07 Score=102.48 Aligned_cols=36 Identities=28% Similarity=0.435 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccc
Confidence 568999999999999999999998 999999998743
No 66
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.51 E-value=5.6e-07 Score=94.76 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=51.3
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCC
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 396 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~ 396 (567)
.++...++ +.|++|++++.|++|..+ ++ ++++|++.++ + ++.++ .||+|+|..-...+|..+|+..
T Consensus 198 ~~l~~~l~-~~GV~i~~~~~v~~i~~~--~~-----~v~~v~l~dG-~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 198 EFYQAEHR-AHGVDLRTGAAMDCIEGD--GT-----KVTGVRMQDG-S--VIPAD-IVIVGIGIVPCVGALISAGASG 263 (415)
T ss_dssp HHHHHHHH-HTTCEEEETCCEEEEEES--SS-----BEEEEEESSS-C--EEECS-EEEECSCCEESCHHHHHTTCCC
T ss_pred HHHHHHHH-hCCCEEEECCEEEEEEec--CC-----cEEEEEeCCC-C--EEEcC-EEEECCCCccChHHHHhCCCCc
Confidence 34555555 689999999999999875 34 7888887654 2 68897 7999999887778888888753
No 67
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.51 E-value=3.1e-07 Score=93.33 Aligned_cols=36 Identities=31% Similarity=0.385 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
.+||||||||++|+++|+.|++. |.+|+||||.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 37999999999999999999999 9999999997643
No 68
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.51 E-value=8.4e-07 Score=95.79 Aligned_cols=37 Identities=32% Similarity=0.384 Sum_probs=33.5
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
+.++||||||+|++|+++|..|++. |.+|+||||.+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 46 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQ 46 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 4679999999999999999999999 999999998643
No 69
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.50 E-value=7.1e-08 Score=93.25 Aligned_cols=36 Identities=31% Similarity=0.385 Sum_probs=33.5
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
++||+|||||++|++||+.|+++ |++|+||||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 48999999999999999999999 9999999998654
No 70
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.50 E-value=4.7e-07 Score=91.78 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=46.0
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHH
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKIL 389 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LL 389 (567)
++..+.+ ..|++|++++.|++|..+ ++ ++++|.+.+ +|+..++.++ .||+|+|....+.+|
T Consensus 214 ~~~~l~~-~~gv~i~~~~~v~~i~~~--~~-----~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 214 MQKRAEK-NEKIEILYNTVALEAKGD--GK-----LLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIV 276 (338)
T ss_dssp HHHHHHH-CTTEEEECSEEEEEEEES--SS-----SEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGG
T ss_pred HHHHHHh-cCCeEEeecceeEEEEcc--cC-----cEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHh
Confidence 3444444 469999999999999876 34 688899887 4666789997 799999976555544
No 71
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.48 E-value=8.9e-07 Score=97.15 Aligned_cols=36 Identities=33% Similarity=0.512 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+|||||||||++|+++|+.|++. |++|+||||.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCC
Confidence 469999999999999999999999 999999998754
No 72
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.44 E-value=2.1e-07 Score=97.05 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+|||||||||++|+++|..|++. |.+|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 48999999999999999999999 99999999864
No 73
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.44 E-value=1.2e-06 Score=88.02 Aligned_cols=66 Identities=18% Similarity=0.268 Sum_probs=51.2
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
++..+.+ +.|+++++++.|++|..+ + ++.+|++.+ +|+..++.++ .||+|+|......+|..+|+-
T Consensus 195 ~~~~~~~-~~gv~~~~~~~v~~i~~~--~------~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 195 YVETVKK-KPNVEFVLNSVVKEIKGD--K------VVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp HHHHHHT-CTTEEEECSEEEEEEEES--S------SEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTCC
T ss_pred HHHHHHh-CCCcEEEeCCEEEEEecc--C------ceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCee
Confidence 4555555 569999999999999865 3 577888876 4666678997 799999977776888888764
No 74
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.43 E-value=2e-07 Score=95.41 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHHh---cCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae---~~G~~VlVLE~G~~~ 153 (567)
+||||||||++|+++|+.|++ . |++|+||||+...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCC
Confidence 699999999999999999999 7 9999999997643
No 75
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.40 E-value=1.3e-06 Score=97.14 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=33.8
Q ss_pred CCcccEEEECCChhHHHHHHHHHh-cCCCeEEEEecCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSE-IKKWKVLLLEAGIE 152 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae-~~G~~VlVLE~G~~ 152 (567)
..++||||||||++|+++|..|++ . |.+|+||||.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 357999999999999999999999 8 999999998743
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.37 E-value=2.9e-06 Score=90.49 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCC-----CeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKK-----WKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G-----~~VlVLE~G~~~ 153 (567)
..|||||||+|++|+++|..|++. | .+|+|||+.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCC
Confidence 469999999999999999999998 8 999999998653
No 77
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.35 E-value=8.2e-06 Score=89.12 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++||||||||++|+++|..|++. |.+|+||||.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 468999999999999999999998 999999998753
No 78
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.29 E-value=2.5e-06 Score=89.36 Aligned_cols=66 Identities=12% Similarity=0.172 Sum_probs=51.0
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCCC
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 396 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG~ 396 (567)
..+...++ +.|++|++++.|++|..+ ++ ++++|++.++ + ++.++ .||+|+|......++..+|+..
T Consensus 188 ~~l~~~l~-~~GV~i~~~~~v~~i~~~--~~-----~v~~V~~~dG-~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 188 SYFHDRHS-GAGIRMHYGVRATEIAAE--GD-----RVTGVVLSDG-N--TLPCD-LVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp HHHHHHHH-HTTCEEECSCCEEEEEEE--TT-----EEEEEEETTS-C--EEECS-EEEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHHH-hCCcEEEECCEEEEEEec--CC-----cEEEEEeCCC-C--EEEcC-EEEECcCCccCHHHHHhCCCCC
Confidence 34555555 689999999999999875 34 7888887554 2 68897 7999999877777888888753
No 79
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.27 E-value=5.3e-06 Score=88.12 Aligned_cols=37 Identities=35% Similarity=0.333 Sum_probs=33.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCC--eEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~~~ 153 (567)
..+||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCC
Confidence 358999999999999999999998 99 99999997654
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.27 E-value=4.9e-06 Score=88.95 Aligned_cols=66 Identities=11% Similarity=0.139 Sum_probs=45.6
Q ss_pred hHHhhHHHHhcCCCeE--EecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 317 NGAFIRPIRKKRKNLT--ILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 317 ~~~~L~~a~~~~~gv~--I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
...||...++ +.+++ |.++++|++|..+++++ ...|.+.+ +|+..++.++ .||+|+|.+..|++..
T Consensus 103 l~~~l~~~~~-~~gv~~~i~~~~~V~~v~~~~~~~------~~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p~ 172 (464)
T 2xve_A 103 LWDYIKGRVE-KAGVRKYIRFNTAVRHVEFNEDSQ------TFTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVPE 172 (464)
T ss_dssp HHHHHHHHHH-HHTCGGGEECSEEEEEEEEETTTT------EEEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCCC
T ss_pred HHHHHHHHHH-HcCCcceEEeCCEEEEEEEcCCCC------cEEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccCC
Confidence 3446665555 46787 99999999998764322 23455554 3655678996 7999999888887643
No 81
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.23 E-value=5.7e-07 Score=90.37 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=33.8
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
...|||||||||+||++||.+|++. |++|+|+|++..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~~ 38 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFMA 38 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 3569999999999999999999999 999999998753
No 82
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.23 E-value=7e-07 Score=89.91 Aligned_cols=36 Identities=42% Similarity=0.631 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+|||||||||+||++||.+|++. |++|+|+|++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~~~ 40 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERGIP 40 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 469999999999999999999999 999999998643
No 83
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.23 E-value=6.3e-07 Score=96.64 Aligned_cols=41 Identities=24% Similarity=0.407 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCCc
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFF 156 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~ 156 (567)
..+||||||||++||+||++|+++.|++|+|||+.+..++.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 46999999999999999999998449999999999887654
No 84
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.22 E-value=7.1e-07 Score=89.66 Aligned_cols=36 Identities=25% Similarity=0.370 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
+.|||||||||+||++||.+|++. |++|+|+|++..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~~ 40 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNTN 40 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 459999999999999999999998 999999999753
No 85
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.19 E-value=1.1e-06 Score=89.36 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=34.3
Q ss_pred CCcccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 153 (567)
..++||||||||++|++||++|+++ .|++|+||||+...
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 3579999999999999999999862 59999999998654
No 86
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.19 E-value=1.2e-06 Score=93.51 Aligned_cols=42 Identities=29% Similarity=0.332 Sum_probs=37.7
Q ss_pred CCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCCc
Q psy1042 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFF 156 (567)
Q Consensus 114 ~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~ 156 (567)
++.+|||||||||++|+++|.+|+++ |++|+||||.+..++.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCcc
Confidence 44679999999999999999999999 9999999999877543
No 87
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.18 E-value=2.4e-06 Score=93.08 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHH-hcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLS-EIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~La-e~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|.+|+ +. |.+|+|||+++.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCC
Confidence 3589999999999999999999 76 999999998754
No 88
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.18 E-value=4e-06 Score=91.42 Aligned_cols=36 Identities=36% Similarity=0.482 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+.+|.+|++. |.+|+|||+++.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~ 43 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGED 43 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 458999999999999999999997 999999998754
No 89
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.15 E-value=4.7e-06 Score=90.97 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+.+|.+|++. |.+|+|||+++.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~ 55 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASG 55 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 469999999999999999999998 999999998754
No 90
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.10 E-value=2.1e-06 Score=88.33 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=33.9
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..++||||||||++|+++|++|++. |++|+||||+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCC
Confidence 4568999999999999999999998 999999999753
No 91
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.09 E-value=2.1e-06 Score=89.91 Aligned_cols=38 Identities=29% Similarity=0.211 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 114 ~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
....|||||||||++|+++|+.|++. |++|+||||.+.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~ 57 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKE 57 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 34569999999999999999999999 999999999753
No 92
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.06 E-value=2.5e-06 Score=89.95 Aligned_cols=36 Identities=39% Similarity=0.537 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
|||||||||++|+++|++|+++ |++|+|||+.+..+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCcc
Confidence 8999999999999999999999 99999999976653
No 93
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.99 E-value=5e-06 Score=87.06 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=36.7
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCCc
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFF 156 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~ 156 (567)
...+||||||||++|+++|++|++++|++|+|||+.+..++.
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 356999999999999999999999658999999999876543
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.94 E-value=0.00025 Score=76.37 Aligned_cols=64 Identities=13% Similarity=0.112 Sum_probs=43.7
Q ss_pred hHHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCC
Q psy1042 317 NGAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGA 382 (567)
Q Consensus 317 ~~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa 382 (567)
...||..+++ +-+..|..+++|++|..++.++........-|++.+ .|+..++.|+ .||+|+|.
T Consensus 147 ~~~Yl~~~A~-~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQ-QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHH-TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHH-HcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 4458888777 677789999999999876432211111234455554 3677789995 79999994
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.91 E-value=7.7e-06 Score=78.85 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
+|||||||||++|+.+|..|++. |.+|+|||++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecC
Confidence 58999999999999999999999 9999999987
No 96
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.90 E-value=1e-05 Score=87.01 Aligned_cols=38 Identities=34% Similarity=0.446 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||||||||++|+++|++|+++ |++|+|||+.+..+
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIG 75 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSB
T ss_pred cCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 458999999999999999999998 99999999987664
No 97
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.89 E-value=9.8e-06 Score=84.54 Aligned_cols=40 Identities=38% Similarity=0.549 Sum_probs=36.1
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
...+||||||||++|+++|++|+++ |.+|+|||+.+..++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCC
Confidence 3579999999999999999999998 999999999877643
No 98
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.88 E-value=8.1e-06 Score=88.43 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||||||||++|++||++|+++ |++|+|||+.+..+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 458999999999999999999999 99999999987764
No 99
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.88 E-value=8.5e-06 Score=84.29 Aligned_cols=38 Identities=37% Similarity=0.543 Sum_probs=34.6
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
.||+||||||++|+++|.+|+++ |++|+|||+++..++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGG 38 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCc
Confidence 37999999999999999999999 999999999876643
No 100
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.87 E-value=8.3e-06 Score=87.31 Aligned_cols=36 Identities=36% Similarity=0.518 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+|||||||||++|+++|.+|++. |++|+|||+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCc
Confidence 469999999999999999999999 999999999863
No 101
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.87 E-value=8.8e-06 Score=87.39 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
..|||||||||++|+++|.+|++. |++|+|||++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeCC
Confidence 469999999999999999999999 9999999994
No 102
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.86 E-value=9.6e-06 Score=81.68 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=45.8
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
+.|++|+++++|++|..+ ++ ++.+|.+.. +|+..++.++ .||+|+|....+.+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~--~~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD--GK-----KVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEES--SS-----SEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecC--Cc-----eEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 479999999999999865 33 588898874 5666678996 79999997666566665554
No 103
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.86 E-value=1.3e-05 Score=85.86 Aligned_cols=40 Identities=28% Similarity=0.363 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
...+||||||||++|+++|++|+++ |++|+|||+.+..++
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCC
Confidence 3568999999999999999999998 999999999887643
No 104
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.86 E-value=1.3e-05 Score=84.78 Aligned_cols=41 Identities=27% Similarity=0.355 Sum_probs=36.7
Q ss_pred CCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 114 ~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
|+.+||+||||+|++|+++|.+|+++ |++|+|||+....++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGG 43 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCccc
Confidence 44679999999999999999999998 999999999877643
No 105
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.84 E-value=1e-05 Score=84.27 Aligned_cols=36 Identities=28% Similarity=0.423 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++||||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 368999999999999999999999 999999998743
No 106
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.84 E-value=7.7e-06 Score=86.92 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=34.1
Q ss_pred cccEEEECCChhHHHHHHHHHhcCC------CeEEEEecCCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKK------WKVLLLEAGIEEP 154 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G------~~VlVLE~G~~~~ 154 (567)
.+||||||||++|+++|++|+++ | ++|+|||+.+..+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCC
Confidence 48999999999999999999999 8 9999999987654
No 107
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.84 E-value=1.4e-05 Score=84.02 Aligned_cols=39 Identities=26% Similarity=0.177 Sum_probs=35.2
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCC-CeEEEEecCCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEEPF 155 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G~~~~~ 155 (567)
..+||||||||++|++||++|+++ | .+|+|+|+.+..++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCC
Confidence 458999999999999999999998 9 99999999877643
No 108
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.83 E-value=1.1e-05 Score=84.40 Aligned_cols=35 Identities=37% Similarity=0.441 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCe-EEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWK-VLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~-VlVLE~G~~ 152 (567)
.+||||||||++|+++|..|++. |.+ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCC
Confidence 58999999999999999999999 999 999998754
No 109
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.83 E-value=1.4e-05 Score=83.47 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 458999999999999999999998 999999999754
No 110
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.80 E-value=1.2e-05 Score=87.08 Aligned_cols=39 Identities=36% Similarity=0.278 Sum_probs=35.3
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCC-CeEEEEecCCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEEPF 155 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G~~~~~ 155 (567)
..+||||||||++|++||++|+++ | .+|+|||+....++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCC
Confidence 358999999999999999999998 9 99999999877644
No 111
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.80 E-value=1.2e-05 Score=85.79 Aligned_cols=37 Identities=38% Similarity=0.594 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
..|||||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCC
Confidence 469999999999999999999998 9999999976554
No 112
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.79 E-value=1.3e-05 Score=85.74 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
...+||||||||++|+++|+.|+++ |++|+|||+....+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLG 52 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCC
Confidence 3568999999999999999999999 99999999987764
No 113
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.79 E-value=1.3e-05 Score=81.99 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCC------CeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK------WKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G------~~VlVLE~G~~ 152 (567)
||||||||++|+++|++|+++ | .+|+|||++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCC
Confidence 899999999999999999998 7 99999999753
No 114
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.79 E-value=1.5e-05 Score=81.71 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=47.7
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEE-eCCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFF-YKKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~-~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
.|....+ +.|++|+++++|++|..+ ++ ++.+|.+. .+|+..++.++ .||+|+|.-..+.+|..+|+
T Consensus 207 ~l~~~~~-~~gv~i~~~~~v~~i~~~--~~-----~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 207 EVERARA-NGTIDVYLETEVASIEES--NG-----VLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp SSHHHHH-HTSEEEESSEEEEEEEEE--TT-----EEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSSC
T ss_pred HHHHHhh-cCceEEEcCcCHHHhccC--CC-----ceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhcc
Confidence 3444444 578999999999999875 34 78888886 35655678997 79999995544456665554
No 115
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.79 E-value=1.4e-05 Score=85.18 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC--eEEEEecCCCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGIEEPF 155 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~~~~~ 155 (567)
+||||||||++|+++|++|+++ |. +|+|||+.+..+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCC
Confidence 6999999999999999999999 99 9999999876643
No 116
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.78 E-value=1.7e-05 Score=82.22 Aligned_cols=35 Identities=34% Similarity=0.361 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+||||||||++|+++|..|++. |.+|+|||+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 58999999999999999999999 999999998754
No 117
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.77 E-value=1.6e-05 Score=84.22 Aligned_cols=38 Identities=29% Similarity=0.365 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||||||||++|+++|++|+++ |++|+|||+....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCC
Confidence 358999999999999999999998 99999999987664
No 118
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.75 E-value=1.4e-05 Score=85.64 Aligned_cols=35 Identities=29% Similarity=0.577 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..|||||||||++|+++|.+|++. |++|+|||++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 469999999999999999999999 99999999874
No 119
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.75 E-value=1.7e-05 Score=84.58 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
..|||||||||++|+++|.+|++. |++|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 359999999999999999999999 9999999994
No 120
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.75 E-value=1.5e-05 Score=84.26 Aligned_cols=34 Identities=26% Similarity=0.228 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+||||||||++|+++|..|++. |++|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 47999999999999999999999 99999999864
No 121
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.75 E-value=1.9e-05 Score=84.99 Aligned_cols=40 Identities=25% Similarity=0.211 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
...+||||||||++|+++|++|+++ |++|+|||+.+..++
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGG 50 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCC
Confidence 3468999999999999999999998 999999999887643
No 122
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.74 E-value=0.00018 Score=79.00 Aligned_cols=36 Identities=19% Similarity=0.458 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
..||||||||++|+++|.+|++. +|.+|+|||+.+.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 46999999999999999999985 5899999998743
No 123
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.74 E-value=2.4e-05 Score=80.97 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC-CCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG-IEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G-~~~~ 154 (567)
..+||+|||||++|+++|++|+++ |++|+|||+. ...+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccccC
Confidence 457999999999999999999999 9999999998 6553
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.74 E-value=2.2e-05 Score=81.88 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..+||||||||++|+++|..|++. |++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 358999999999999999999998 999999998743
No 125
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.73 E-value=2.3e-05 Score=79.37 Aligned_cols=65 Identities=18% Similarity=0.151 Sum_probs=47.4
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
.|...++ +.|+++++++.|++|..+ + ++.+|.+.. +|+..++.++ .||+|+|.-....+|..+|+
T Consensus 196 ~l~~~l~-~~gv~v~~~~~v~~i~~~--~------~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 196 ELMKAHE-EGRLEVLTPYELRRVEGD--E------RVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HHHHHHH-TTSSEEETTEEEEEEEES--S------SEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSCC
T ss_pred HHHhccc-cCCeEEecCCcceeEccC--C------CeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcce
Confidence 4555555 679999999999999864 3 577888774 5655678997 79999996544456665554
No 126
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.73 E-value=2e-05 Score=78.02 Aligned_cols=35 Identities=40% Similarity=0.591 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.|||||||||++|+++|.+|++. |++|+|||++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCc
Confidence 38999999999999999999999 999999998653
No 127
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.73 E-value=2.3e-05 Score=72.02 Aligned_cols=33 Identities=36% Similarity=0.603 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
||++|||||++|+.+|..|++. |.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 7999999999999999999998 99999999875
No 128
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.73 E-value=2e-05 Score=79.48 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=44.4
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
+..+.+ ..|++|+++++|++|..+ + ++.+|++.. +|+..++.++ .||+|+|.-....+|.
T Consensus 194 ~~~l~~-~~gv~i~~~~~v~~i~~~--~------~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 194 QARAFA-NPKMKFIWDTAVEEIQGA--D------SVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFVK 255 (325)
T ss_dssp HHHHHT-CTTEEEECSEEEEEEEES--S------SEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred HHHHHh-cCCceEecCCceEEEccC--C------cEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHHh
Confidence 344444 579999999999999864 3 578898875 5666789997 7999998655445543
No 129
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.72 E-value=2.1e-05 Score=84.43 Aligned_cols=34 Identities=32% Similarity=0.396 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
..|||||||||++|+++|.+|++. |++|+|||++
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEec
Confidence 569999999999999999999998 9999999964
No 130
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.72 E-value=2.2e-05 Score=84.34 Aligned_cols=37 Identities=32% Similarity=0.561 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
..|||||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~ 60 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRSTY 60 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 359999999999999999999998 9999999987654
No 131
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.71 E-value=2.2e-05 Score=85.39 Aligned_cols=35 Identities=26% Similarity=0.487 Sum_probs=32.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+||+||||||++|.++|.++|+. |++|+|||+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 469999999999999999999999 99999999764
No 132
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.71 E-value=2.3e-05 Score=84.97 Aligned_cols=35 Identities=34% Similarity=0.530 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..|||||||||++|+++|.+|++. |++|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 569999999999999999999998 99999999864
No 133
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.69 E-value=2.7e-05 Score=78.39 Aligned_cols=59 Identities=12% Similarity=0.114 Sum_probs=44.3
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
+.|+++++++.|++|..+ + .+.+|.+.+ +++..++.++ .||+|+|....+.+|..+|+.
T Consensus 201 ~~gv~~~~~~~v~~i~~~--~------~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIGE--D------KIEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp HSSCEEETTEEEEEEECS--S------SCCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSCC
T ss_pred cCCeEEEeCceeeEEecC--C------ceEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCcc
Confidence 489999999999999765 2 245677765 3556678997 799999976656666666653
No 134
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.69 E-value=2.3e-05 Score=84.26 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+|||||||||++|+++|.+|++. |++|+|||+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 569999999999999999999998 99999999843
No 135
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.68 E-value=2.3e-05 Score=84.40 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.||+||||||++|+++|.+|++. |++|+|||++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 59999999999999999999998 99999999975
No 136
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.67 E-value=2.7e-05 Score=83.05 Aligned_cols=35 Identities=34% Similarity=0.570 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 469999999999999999999998 99999999974
No 137
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.67 E-value=2.9e-05 Score=84.53 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHHh---cCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae---~~G~~VlVLE~G~ 151 (567)
..+||||||||++|+++|+.|++ . |.+|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCC
Confidence 35899999999999999999999 8 99999999964
No 138
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.66 E-value=3.6e-05 Score=83.49 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=47.6
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHH-HHHhCCCC
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPK-ILMLSGIG 395 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~-LLl~SGIG 395 (567)
.+...++ +.|++|+++++|++|..++ ++ +++++.+...+...++.++ .||+|+|...... +|..+|+.
T Consensus 260 ~l~~~l~-~~GV~i~~~~~V~~i~~~~-~~-----~v~~~~v~~~~G~~~i~aD-~Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 260 YVLDRMK-EQGMEIISGSNVTRIEEDA-NG-----RVQAVVAMTPNGEMRIETD-FVFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp HHHHHHH-HTTCEEESSCEEEEEEECT-TS-----BEEEEEEEETTEEEEEECS-CEEECCCCEECCHHHHHHHTCC
T ss_pred HHHHHHH-hCCcEEEECCEEEEEEEcC-CC-----ceEEEEEEECCCcEEEEcC-EEEECcCCccCCccCHHHcCCc
Confidence 4555555 5899999999999998653 23 5655555433222368997 6999999876666 67777763
No 139
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.65 E-value=2.7e-05 Score=82.74 Aligned_cols=35 Identities=37% Similarity=0.500 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..||+||||||++|+++|.+|++. |++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 469999999999999999999998 99999999974
No 140
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.65 E-value=2.9e-05 Score=82.84 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHHhcCC--CeEEEEecCCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGIEEP 154 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G--~~VlVLE~G~~~~ 154 (567)
.+||||||||++|+++|++|+++ | .+|+|||+.+..+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLG 42 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSB
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCC
Confidence 47999999999999999999998 8 9999999976653
No 141
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.65 E-value=2.4e-05 Score=79.50 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=32.5
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
...+||||||+|++|+++|..|++. |++|+|||+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 3569999999999999999999998 9999999975
No 142
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.64 E-value=3.5e-05 Score=82.21 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..|||||||||++|+++|.+|++. |++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 468999999999999999999998 99999999983
No 143
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.63 E-value=2.9e-05 Score=83.29 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=34.1
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
+..|||||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 3469999999999999999999998 9999999996543
No 144
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.62 E-value=2.6e-05 Score=83.47 Aligned_cols=37 Identities=27% Similarity=0.415 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
..|||||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCc
Confidence 469999999999999999999998 9999999996543
No 145
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.62 E-value=2.5e-05 Score=84.32 Aligned_cols=34 Identities=32% Similarity=0.492 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHHh---cCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae---~~G~~VlVLE~G~ 151 (567)
.+||||||||++|+++|+.|++ . |.+|+|||+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCC
Confidence 3799999999999999999999 8 99999999864
No 146
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.62 E-value=3.4e-05 Score=77.21 Aligned_cols=63 Identities=14% Similarity=0.099 Sum_probs=46.2
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHHhC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLS 392 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl~S 392 (567)
+..+.+ ..|++|++++.|++|..+ ++ ++.+|.+.. +|+..++.++ .||+|+|......+|..+
T Consensus 185 ~~~l~~-~~gv~v~~~~~v~~i~~~--~~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 185 LEHAKN-NDKIEFLTPYVVEEIKGD--AS-----GVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp HHHHHT-CTTEEEETTEEEEEEEEE--TT-----EEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred HHHHhh-CCCeEEEeCCEEEEEECC--CC-----cEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 333434 479999999999999865 24 677888875 6666789997 799999965555555544
No 147
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.61 E-value=3.7e-05 Score=82.38 Aligned_cols=35 Identities=37% Similarity=0.603 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..|||||||||++|+++|.+|++. |++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 469999999999999999999998 99999999974
No 148
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.59 E-value=0.00018 Score=75.86 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=44.2
Q ss_pred HHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 318 GAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 318 ~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
..++...++ +.|+++++++.|++|.- + + +.+.. +|...++.++ .||+++|. ..+.++..+|.+
T Consensus 203 ~~~l~~~l~-~~GV~~~~~~~v~~v~~----~-----~---~~~~~~~g~~~~i~~d-~vi~~~G~-~~~~~~~~~~~~ 266 (430)
T 3hyw_A 203 KRLVEDLFA-ERNIDWIANVAVKAIEP----D-----K---VIYEDLNGNTHEVPAK-FTMFMPSF-QGPEVVASAGDK 266 (430)
T ss_dssp HHHHHHHHH-HTTCEEECSCEEEEECS----S-----E---EEEECTTSCEEEEECS-EEEEECEE-ECCHHHHTTCTT
T ss_pred HHHHHHHHH-hCCeEEEeCceEEEEeC----C-----c---eEEEeeCCCceEeecc-eEEEeccC-CCchHHHhcccc
Confidence 345666666 68999999999999842 2 2 33333 4556789997 79999984 456777877643
No 149
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.58 E-value=4.7e-05 Score=81.29 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
.|||||||||++|+++|.+|++. |++|+|||+++..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 48999999999999999999998 9999999998654
No 150
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.58 E-value=3.5e-05 Score=76.94 Aligned_cols=62 Identities=16% Similarity=0.238 Sum_probs=46.5
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe-CCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~-~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
++..+.+ +.|+++++++.|++|..+ ++ ++.+|.+.. +|+..++.++ .||+|+|....+.++.
T Consensus 188 ~~~~~~~-~~gv~~~~~~~v~~i~~~--~~-----~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 188 TVEKVKK-NEKIELITSASVDEVYGD--KM-----GVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHHHHH-CTTEEEECSCEEEEEEEE--TT-----EEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGGB
T ss_pred HHHHHHh-cCCeEEEeCcEEEEEEcC--CC-----cEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhhh
Confidence 4455555 689999999999999866 44 788888873 5666689997 6999999655554443
No 151
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.58 E-value=4.5e-05 Score=78.46 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
+||||||||.+|+.+|..||+. |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCc
Confidence 6999999999999999999999 9999999987643
No 152
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.57 E-value=4.5e-05 Score=78.24 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
.|||||||||++|+++|.+|++. |. +|+|||+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 58999999999999999999998 99 999999986
No 153
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.57 E-value=4.7e-05 Score=80.96 Aligned_cols=36 Identities=33% Similarity=0.517 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
+|||||||||++|+++|.+|++. |++|+|||+++..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 38999999999999999999998 9999999998644
No 154
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.57 E-value=5.7e-05 Score=81.08 Aligned_cols=39 Identities=33% Similarity=0.319 Sum_probs=35.1
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCC-CeEEEEecCCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEEPF 155 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G~~~~~ 155 (567)
..+||+|||||++|+++|++|+++ | .+|+|||+.+..++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGG 47 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCC
Confidence 468999999999999999999998 8 79999999877643
No 155
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.57 E-value=5.5e-05 Score=80.69 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
..||+||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 469999999999999999999999 9999999998654
No 156
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.57 E-value=5.6e-05 Score=78.62 Aligned_cols=38 Identities=24% Similarity=0.361 Sum_probs=34.6
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
++|++|||||++|+++|.+|++. |.+|+|+|+.+..++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCC
Confidence 37999999999999999999998 999999999877643
No 157
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.57 E-value=5.2e-05 Score=81.41 Aligned_cols=38 Identities=32% Similarity=0.324 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||||||||++|+++|+.|++. |.+|+|||+.+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCC
Confidence 457999999999999999999999 99999999987654
No 158
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.55 E-value=4.6e-05 Score=81.46 Aligned_cols=37 Identities=24% Similarity=0.438 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
..||+||||||++|+++|.+|++. |++|+|||+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCc
Confidence 469999999999999999999998 9999999998654
No 159
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.55 E-value=5.2e-05 Score=78.56 Aligned_cols=34 Identities=35% Similarity=0.670 Sum_probs=31.4
Q ss_pred cEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
||||||||++|+++|..|++. ||.+|+|||+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 899999999999999999985 6999999999754
No 160
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.55 E-value=5e-05 Score=81.81 Aligned_cols=34 Identities=38% Similarity=0.579 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 48999999999999999999998 99999999985
No 161
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.55 E-value=6.4e-05 Score=81.85 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=34.4
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
..+||||||||++|+++|.+|++. |.+|+|||+++..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDV 51 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 469999999999999999999998 9999999998754
No 162
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.54 E-value=5.2e-05 Score=82.70 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHHh---cCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae---~~G~~VlVLE~G~ 151 (567)
..+||||||||++|+++|..|++ . |.+|+|||+..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCC
Confidence 46899999999999999999999 7 99999999864
No 163
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.54 E-value=4.7e-05 Score=76.10 Aligned_cols=54 Identities=17% Similarity=0.239 Sum_probs=42.0
Q ss_pred CCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 329 KNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 329 ~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
.|++|+++++|++|..+ ++ ++.+|++.+ +|+..++.++ .||+|+|....+.+|.
T Consensus 193 ~gv~v~~~~~v~~i~~~--~~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGD--GS-----KVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWLE 248 (310)
T ss_dssp TTEEEESSEEEEEEEES--SS-----SEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred CCeEEecCCceEEEEcC--CC-----cEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHHh
Confidence 69999999999999865 34 688898876 3666789997 7999999655445553
No 164
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.52 E-value=5.4e-05 Score=81.50 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=31.6
Q ss_pred CCcccEEEECCChhHHHHHHHHHh-cCCCeEEEEec
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSE-IKKWKVLLLEA 149 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae-~~G~~VlVLE~ 149 (567)
...|||||||||++|+++|.+|++ . |++|+|||+
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 39 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDV 39 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred ccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEec
Confidence 346999999999999999999999 9 999999993
No 165
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.52 E-value=6.3e-05 Score=78.09 Aligned_cols=33 Identities=36% Similarity=0.411 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.|||||||++|+++|..|++. |++|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 599999999999999999999 999999998643
No 166
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=5.3e-05 Score=80.56 Aligned_cols=33 Identities=33% Similarity=0.572 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.||+||||||++|+++|.+|++. |++|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 58999999999999999999998 9999999997
No 167
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.51 E-value=4.5e-05 Score=76.53 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=44.2
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeC---CEEEEEEcCcEEEEcCCCCccHHHH
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYK---KKLRRARAKKEVISSAGAINSPKIL 389 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~---g~~~~v~A~k~VVLAAGa~~Tp~LL 389 (567)
+...++ +.|++|+++++|++|..+ ++ ++.+|++.+. |+..++.++ .||+|+|.-..+.+|
T Consensus 190 l~~~l~-~~gv~i~~~~~v~~i~~~--~~-----~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 190 LMDKVE-NGNIILHTNRTLEEVTGD--QM-----GVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHHHHH-TSSEEEECSCEEEEEEEC--SS-----SEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred HHHhcc-cCCeEEEcCceeEEEEcC--CC-----ceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 334445 689999999999999866 33 6888988752 545678997 799999965554444
No 168
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.51 E-value=6.2e-05 Score=80.91 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=30.6
Q ss_pred CcccEEEECCChhHHHHHHHHHh-cCCCeEEEEe
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSE-IKKWKVLLLE 148 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae-~~G~~VlVLE 148 (567)
..|||||||||++|+++|.+|++ . |++|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEe
Confidence 35999999999999999999999 9 99999999
No 169
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.51 E-value=5.9e-05 Score=81.80 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=32.1
Q ss_pred CcccEEEECCChhHHHHHHHHHh------------cCCCeEEEEecCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSE------------IKKWKVLLLEAGI 151 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae------------~~G~~VlVLE~G~ 151 (567)
..+||||||||++|+++|..|++ . |.+|+|||+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-KLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-CCeEEEEeCCC
Confidence 35899999999999999999999 7 99999999854
No 170
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.49 E-value=5.9e-05 Score=80.41 Aligned_cols=33 Identities=27% Similarity=0.572 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.|||||||||++|+++|.+|++. |++|+|||+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 48999999999999999999998 9999999997
No 171
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.49 E-value=5e-05 Score=76.73 Aligned_cols=60 Identities=10% Similarity=0.126 Sum_probs=44.3
Q ss_pred HHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHH
Q psy1042 323 PIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKIL 389 (567)
Q Consensus 323 ~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LL 389 (567)
..++ +.|++|++++.|++|..++++. ++.+|.+.. +|+..++.++ .||+|+|.-....+|
T Consensus 203 ~~~~-~~gv~i~~~~~v~~i~~~~~~~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 203 RALS-NPKIDVIWNSSVVEAYGDGERD-----VLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFL 264 (333)
T ss_dssp HHHT-CTTEEEECSEEEEEEEESSSSS-----SEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred HHHh-CCCeeEecCCceEEEeCCCCcc-----ceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHh
Confidence 4445 6899999999999998663222 467788875 4666689997 799999976555554
No 172
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.48 E-value=6.3e-05 Score=80.07 Aligned_cols=34 Identities=29% Similarity=0.503 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
..||+||||||++|+++|.+|++. |++|+|+|++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccC
Confidence 458999999999999999999998 9999999994
No 173
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.44 E-value=8.3e-05 Score=79.34 Aligned_cols=38 Identities=37% Similarity=0.436 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~~~ 154 (567)
..+||||||+|++|+++|++|++. |. +|+|||+++..+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCC
Confidence 458999999999999999999998 98 899999987654
No 174
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.43 E-value=8e-05 Score=83.12 Aligned_cols=35 Identities=37% Similarity=0.506 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHHh-----cCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSE-----IKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae-----~~G~~VlVLE~G~~ 152 (567)
++||||||||++|+++|..|++ . |++|+||||.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCC
Confidence 5899999999999999999999 8 999999998643
No 175
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.42 E-value=8.8e-05 Score=79.10 Aligned_cols=34 Identities=44% Similarity=0.696 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.||+||||||++|+++|.+|++. |++|+|||++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 59999999999999999999998 99999999986
No 176
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.42 E-value=0.00012 Score=80.41 Aligned_cols=42 Identities=24% Similarity=0.256 Sum_probs=38.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 113 DDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 113 ~~~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
.++.+|||||||+|..|+++|..|++. |++||+|||.+..+.
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGG 45 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccC
Confidence 345689999999999999999999999 999999999988754
No 177
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.41 E-value=0.00014 Score=81.64 Aligned_cols=39 Identities=28% Similarity=0.421 Sum_probs=35.4
Q ss_pred CCcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 115 ~~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
...+||||||||++|+++|..|++. |++|+|||+++...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~G 427 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDLG 427 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCC
Confidence 4568999999999999999999999 99999999987653
No 178
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.39 E-value=0.00012 Score=82.99 Aligned_cols=39 Identities=38% Similarity=0.352 Sum_probs=35.1
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF 155 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 155 (567)
..+||||||+|++|+++|..|++. |++|+|||+++..+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 358999999999999999999999 999999999876543
No 179
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.38 E-value=0.00013 Score=77.65 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||+|||||++|+++|..|++. |++|+|+|+.+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCC
Confidence 457999999999999999999999 99999999987653
No 180
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.33 E-value=0.00012 Score=80.71 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
..|||||||||+||+++|.+|++. |++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 569999999999999999999999 9999999974
No 181
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.00014 Score=78.27 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHHhc-C-CCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEI-K-KWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~-~-G~~VlVLE~G~ 151 (567)
.|||||||||++|+++|.+|++. + |++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 38999999999999999999996 3 89999999986
No 182
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.29 E-value=0.00015 Score=75.08 Aligned_cols=64 Identities=6% Similarity=0.032 Sum_probs=45.7
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
..+...++ +.|++|+++++|++|..+ ++ . ..|.+. +|+ ++.++ .||+|+|......+|..+|+-
T Consensus 191 ~~l~~~l~-~~gv~i~~~~~v~~i~~~--~~-----~-~~v~~~-~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 191 KAVQAGLE-GLGVRFHLGPVLASLKKA--GE-----G-LEAHLS-DGE--VIPCD-LVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHHH-TTTCEEEESCCEEEEEEE--TT-----E-EEEEET-TSC--EEEES-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHH-HcCCEEEeCCEEEEEEec--CC-----E-EEEEEC-CCC--EEECC-EEEECcCCCcCHHHHHHCCCC
Confidence 34555566 689999999999999865 22 2 344443 343 58897 799999987666688888764
No 183
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.28 E-value=0.00019 Score=75.78 Aligned_cols=66 Identities=18% Similarity=0.193 Sum_probs=47.2
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
.+...++ +.|++|++++.|++|..+.+++ ++.+|.+.+ | .++.++ .||+|+|......+|..+|+-
T Consensus 196 ~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~~-G--~~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 196 FYEHLHR-EAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCED-G--TRLPAD-LVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHH-HHTCEEECSCCEEEEEECTTTC-----CEEEEEETT-S--CEEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHH-hCCeEEEeCCEEEEEEeccCCC-----cEEEEEeCC-C--CEEEcC-EEEECCCCCcCcchhhccCCC
Confidence 4444455 5799999999999998620123 577777654 3 258896 799999977666788888764
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.26 E-value=0.00017 Score=78.07 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=45.2
Q ss_pred hHHHHhcC-CCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--CCEEEEEEcCcEEEEcCCCCccHHHHH
Q psy1042 321 IRPIRKKR-KNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 390 (567)
Q Consensus 321 L~~a~~~~-~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--~g~~~~v~A~k~VVLAAGa~~Tp~LLl 390 (567)
+...+. + .|++|++++.|++|.-+ ++ ++++|.+.+ +|+..++.++ .||+|+|......+|.
T Consensus 396 l~~~l~-~~~gV~v~~~~~v~~i~~~--~~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 396 LQDKVR-SLKNVDIILNAQTTEVKGD--GS-----KVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWLE 459 (521)
T ss_dssp HHHHHT-TCTTEEEECSEEEEEEEEC--SS-----SEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGGT
T ss_pred HHHHHh-cCCCcEEEeCCEEEEEEcC--CC-----cEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHHh
Confidence 444444 4 69999999999999865 34 688999876 4666789997 7999999654444543
No 185
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.19 E-value=0.00024 Score=75.33 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 153 (567)
+|+||||||++|+++|.+|++. +|.+|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999985 58999999998753
No 186
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.15 E-value=0.00031 Score=74.56 Aligned_cols=37 Identities=22% Similarity=0.235 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEEP 154 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~~ 154 (567)
.||||||||++|+++|.+|++. +|.+|+|||+++...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999985 589999999987653
No 187
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.14 E-value=0.0003 Score=78.40 Aligned_cols=38 Identities=37% Similarity=0.379 Sum_probs=34.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||+|||||++|+++|..|++. |++|+|+|+.+..+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCC
Confidence 458999999999999999999998 99999999987654
No 188
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.13 E-value=0.00027 Score=72.83 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-|+||||||+||+++|.+|++. | +|+|||+++..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCC
Confidence 5999999999999999999998 8 99999998754
No 189
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.11 E-value=0.00025 Score=76.11 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=32.9
Q ss_pred cccEEEECCChhHHHHHHHHHhcCC---CeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKK---WKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G---~~VlVLE~G~~~ 153 (567)
.+||||||||++|+++|.+|++. | .+|+|||+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCC
Confidence 48999999999999999999998 6 999999998753
No 190
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.11 E-value=0.00038 Score=78.55 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||||||||++|+++|..|++. |++|+|+|+.+...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~G 425 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIG 425 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcC
Confidence 458999999999999999999999 99999999987653
No 191
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.11 E-value=0.00038 Score=74.80 Aligned_cols=63 Identities=8% Similarity=0.219 Sum_probs=45.4
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
.+...++ +.|++|++++.|++|..+ ++ ++ .|++. +|+ ++.++ .||+|+|......||..+|+.
T Consensus 231 ~~~~~l~-~~GV~v~~~~~V~~i~~~--~~-----~~-~v~l~-dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 231 WTMEKVR-REGVKVMPNAIVQSVGVS--SG-----KL-LIKLK-DGR--KVETD-HIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHHH-TTTCEEECSCCEEEEEEE--TT-----EE-EEEET-TSC--EEEES-EEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHHH-hcCCEEEeCCEEEEEEec--CC-----eE-EEEEC-CCC--EEECC-EEEECCCCCccHHHHHHcCCc
Confidence 4555556 689999999999999764 33 33 45543 343 68897 799999987666677777763
No 192
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.10 E-value=0.00038 Score=77.73 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||||||||++|+.+|..|++. |++|+|+|+.+...
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~g 409 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIG 409 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCC
Confidence 468999999999999999999998 99999999987653
No 193
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.10 E-value=0.00034 Score=73.84 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHHh---cCCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae---~~G~~VlVLE~G~~~ 153 (567)
..||||||||++|+++|.+|++ . |.+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCC
Confidence 4699999999999999999999 6 9999999998753
No 194
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.09 E-value=0.00033 Score=73.15 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHHh---cCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae---~~G~~VlVLE~G~~~ 153 (567)
.||||||||++|+++|.+|++ . |.+|+|||+.+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCc
Confidence 379999999999999999999 7 9999999998753
No 195
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.08 E-value=0.00036 Score=73.49 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHHh--cCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSE--IKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae--~~G~~VlVLE~G~~~ 153 (567)
+||||||||++|+++|.+|++ . |++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCC
Confidence 589999999999999999999 6 8999999998754
No 196
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.06 E-value=0.00043 Score=73.33 Aligned_cols=37 Identities=32% Similarity=0.517 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 153 (567)
.+||||||||++|+++|.+|++. +|.+|+|||+++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 37999999999999999999985 57899999998754
No 197
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.06 E-value=0.00035 Score=74.50 Aligned_cols=64 Identities=17% Similarity=0.198 Sum_probs=45.7
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
..+...++ +.|++|+++++|++|..+ ++ +++ |.+.+ |+ ++.++ .||+|+|....+.|+..+|+-
T Consensus 206 ~~l~~~l~-~~GV~i~~~~~v~~i~~~--~~-----~v~-v~~~~-g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 206 QMLRHDLE-KNDVVVHTGEKVVRLEGE--NG-----KVA-RVITD-KR--TLDAD-LVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHHHHHHH-HTTCEEECSCCEEEEEES--SS-----BEE-EEEES-SC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHH-hcCCEEEeCCEEEEEEcc--CC-----eEE-EEEeC-CC--EEEcC-EEEECCCCCcCHHHHHhCCcc
Confidence 34555555 689999999999999874 23 454 55544 43 68897 799999987666677776763
No 198
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.05 E-value=0.00026 Score=76.08 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=42.1
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
+.|++|++++.|++|..+ + ++.+|... +| .++.++ .||+|+|..-...|+..+|+.
T Consensus 269 ~~GV~v~~~~~v~~i~~~--~------~v~~v~~~-~g--~~i~aD-~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN--E------KVERVIDM-NN--HEYKVD-ALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHTCEEEECSSEEEEECS--S------SCCEEEET-TC--CEEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred hCCcEEEeCCeeEEEecC--C------ceEEEEeC-CC--eEEEeC-EEEECCCcCcCchHHHhcCCC
Confidence 479999999999999754 2 34556543 33 368897 799999987777788888763
No 199
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.04 E-value=0.00042 Score=72.47 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCC--eEEEEecCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGIEE 153 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~~~ 153 (567)
..+|+||||+|++|+++|.+|++. |. +|+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCC
Confidence 458999999999999999999998 87 59999998654
No 200
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.04 E-value=0.00038 Score=80.92 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=45.6
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe------CCEEEEEEcCcEEEEcCCCCccHHHHHhCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY------KKKLRRARAKKEVISSAGAINSPKILMLSG 393 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~------~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SG 393 (567)
+.|++|++++.|++|..++ ++ ++.+|++.+ +|+..++.++ .||+|+|-.-...|+...|
T Consensus 328 ~~GV~v~~~~~v~~i~~~~-~~-----~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 328 ADGVQVISGSVVVDTEADE-NG-----ELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HTTCCEEETEEEEEEEECT-TS-----CEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred hCCeEEEeCCEeEEEeccC-CC-----CEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 4899999999999998631 13 688888876 3555689997 7999999776667776664
No 201
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.04 E-value=0.0055 Score=66.12 Aligned_cols=33 Identities=6% Similarity=0.138 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecC
Confidence 4699999999999999999998 99999999764
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.04 E-value=0.00042 Score=74.12 Aligned_cols=37 Identities=27% Similarity=0.412 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 153 (567)
.+||||||||++|+++|.+|++. +|.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 36999999999999999999985 48999999998754
No 203
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.03 E-value=0.00049 Score=78.52 Aligned_cols=38 Identities=37% Similarity=0.379 Sum_probs=34.8
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
..+||+|||+|++|+++|+.|++. |++|+|+|+....+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCC
Confidence 457999999999999999999998 99999999987654
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.01 E-value=0.00047 Score=72.97 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 153 (567)
+||||||||++|+++|.+|++. +|.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4899999999999999999985 58999999998754
No 205
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.00 E-value=0.0028 Score=63.34 Aligned_cols=32 Identities=28% Similarity=0.378 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-.++|||+|..|+-+|..|++. |.+|.++++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~ 187 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYM 187 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcC
Confidence 3699999999999999999998 9999999975
No 206
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.98 E-value=0.0036 Score=66.50 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 3799999999999999999998 99999999763
No 207
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.87 E-value=0.0058 Score=63.06 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCc
Confidence 4799999999999999999998 99999999864
No 208
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.86 E-value=0.007 Score=61.58 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||+|..|+-+|..|++. |.+|.|+++++
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~ 196 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKN-AASVTLVHRGH 196 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTT-SSEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 699999999999999999998 99999999764
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.86 E-value=0.00077 Score=71.71 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHHhcCC--CeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G--~~VlVLE~G~~~ 153 (567)
.+||||||+|++|+.+|..|++. | .+|+|+|+.+..
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcC
Confidence 47999999999999999999998 7 999999998754
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.85 E-value=0.0073 Score=60.13 Aligned_cols=33 Identities=27% Similarity=0.252 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++++.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 178 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRD 178 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 3699999999999999999998 99999999753
No 211
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.84 E-value=0.0061 Score=64.48 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~ 202 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGA 202 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcC
Confidence 4799999999999999999998 9999999975
No 212
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.82 E-value=0.00083 Score=78.59 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~~~ 154 (567)
..+||+|||||+||+++|.+|++. |+ +|+|+|+.+...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYVG 224 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCCC
Confidence 358999999999999999999999 99 799999976543
No 213
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.77 E-value=0.0093 Score=59.15 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++++++
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 176 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRD 176 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCC
Confidence 4699999999999999999998 99999999753
No 214
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.77 E-value=0.0031 Score=65.80 Aligned_cols=56 Identities=11% Similarity=0.055 Sum_probs=43.5
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
+.|++|++++.|++|..+ + ++.+|++.++ + ++.++ .||+|+|......+|..+|+.
T Consensus 197 ~~GV~i~~~~~v~~i~~~--~------~~~~v~~~dg-~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 197 ELGVQVELGTGVVGFSGE--G------QLEQVMASDG-R--SFVAD-SALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHTCEEECSCCEEEEECS--S------SCCEEEETTS-C--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HCCCEEEeCCEEEEEecc--C------cEEEEEECCC-C--EEEcC-EEEEeeCCeecHHHHHhCCCc
Confidence 478999999999999754 2 3566776543 2 68897 799999987777888888874
No 215
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.77 E-value=0.0051 Score=64.67 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~ 182 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAA 182 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 4699999999999999999998 99999999764
No 216
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.75 E-value=0.0085 Score=63.73 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 4799999999999999999998 99999999763
No 217
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.70 E-value=0.012 Score=58.25 Aligned_cols=32 Identities=34% Similarity=0.385 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||+|..|+-+|..|++. |.+|.++++.+
T Consensus 146 ~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 177 (310)
T 1fl2_A 146 RVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAP 177 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-BSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCc
Confidence 699999999999999999998 99999999763
No 218
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.69 E-value=0.0012 Score=68.94 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCe--EEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWK--VLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~--VlVLE~G~~~ 153 (567)
.||||||+|++|+++|.+|++. |.+ |+|+|+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCC
Confidence 4899999999999999999998 877 9999998754
No 219
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.63 E-value=0.013 Score=58.66 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~ 192 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRD 192 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCC
Confidence 3699999999999999999998 99999999763
No 220
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.62 E-value=0.0013 Score=71.69 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 153 (567)
.||||||||++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4899999999999999999986 47899999998765
No 221
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.62 E-value=0.0012 Score=70.04 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=32.9
Q ss_pred cccEEEECCChhHHHHHHHHHh-c-C----CCeEEEEecCCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSE-I-K----KWKVLLLEAGIEE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae-~-~----G~~VlVLE~G~~~ 153 (567)
.+||||||||++|+.+|..|++ . + |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4799999999999999999998 5 3 8999999998654
No 222
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.62 E-value=0.0037 Score=66.76 Aligned_cols=33 Identities=33% Similarity=0.482 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.-+++|||+|..|+-+|..|++. |.+|.|+|++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~ 218 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERN 218 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCG
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeC
Confidence 35799999999999999999998 9999999975
No 223
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.57 E-value=0.001 Score=73.99 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHHhcCC--------CeEEEEecCC-CC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKK--------WKVLLLEAGI-EE 153 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G--------~~VlVLE~G~-~~ 153 (567)
..+|+|||+|++|+++|++|++. | ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 47899999999999999999998 8 9999999987 54
No 224
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.56 E-value=0.015 Score=58.25 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++++++
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~ 185 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRP 185 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCC
Confidence 3699999999999999999998 99999999763
No 225
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.53 E-value=0.015 Score=58.20 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+++++
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 185 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRD 185 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 3699999999999999999998 99999999753
No 226
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.45 E-value=0.0021 Score=66.69 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
-|||||||+||+++|.+|++. ++.+|+|||+.+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 399999999999999999886 3579999998764
No 227
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.41 E-value=0.012 Score=62.34 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 204 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLP 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999763
No 228
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.40 E-value=0.0021 Score=67.77 Aligned_cols=33 Identities=15% Similarity=0.443 Sum_probs=29.7
Q ss_pred EEEECCChhHHHHHHHHHhcCC--CeEEEEecCCCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGIEE 153 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G--~~VlVLE~G~~~ 153 (567)
|||||||+||+++|.+|++. | .+|+|||+++..
T Consensus 3 VvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDM 37 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCS
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCC
Confidence 89999999999999999997 6 679999998654
No 229
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.40 E-value=0.019 Score=61.88 Aligned_cols=33 Identities=33% Similarity=0.340 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~ 388 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAP 388 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-BSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCc
Confidence 3799999999999999999998 99999999763
No 230
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.39 E-value=0.015 Score=61.84 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccC
Confidence 3699999999999999999998 99999999763
No 231
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.34 E-value=0.022 Score=60.92 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 3699999999999999999998 99999999763
No 232
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.0075 Score=64.29 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 218 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGE 218 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCC
Confidence 3699999999999999999998 99999999763
No 233
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.30 E-value=0.02 Score=60.74 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 207 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAP 207 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCC
Confidence 3699999999999999999998 99999999763
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.21 E-value=0.023 Score=60.25 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++..|.+|.++|+++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 4799999999999999999884489999999764
No 235
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.19 E-value=0.0039 Score=64.62 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 154 (567)
+..-|||||||+||+++|.+|... +.+|+|||+.+...
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCCC
Confidence 456799999999999999999665 99999999987643
No 236
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.17 E-value=0.011 Score=62.80 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 210 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFAS 210 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 3799999999999999999998 99999999763
No 237
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.06 E-value=0.16 Score=53.42 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
.-.|+|||+|..|+-+|..|++. +|.+|.++++.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 35799999999999999999986 6889999998764
No 238
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.05 E-value=0.025 Score=55.78 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~ 180 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRD 180 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCC
Confidence 4699999999999999999998 99999999753
No 239
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.05 E-value=0.035 Score=59.23 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 231 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL-GAKVTVVEFLD 231 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEeccc
Confidence 3699999999999999999998 99999999753
No 240
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.97 E-value=0.019 Score=60.58 Aligned_cols=32 Identities=31% Similarity=0.471 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 182 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHE 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred eEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 699999999999999999998 99999999753
No 241
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.89 E-value=0.041 Score=59.68 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCC
Confidence 699999999999999999998 99999999753
No 242
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.87 E-value=0.075 Score=56.27 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 213 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMD 213 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCC
Confidence 3699999999999999999998 99999999753
No 243
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.86 E-value=0.0057 Score=65.67 Aligned_cols=34 Identities=15% Similarity=0.308 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..|||||||.||+.+|.+|++. +++|+|||+.+.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 4799999999999999999988 999999998754
No 244
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.74 E-value=0.073 Score=56.68 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~ 217 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGI-GLDTTVMMRS 217 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEcC
Confidence 599999999999999999998 9999999964
No 245
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.61 E-value=0.08 Score=56.22 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||+|..|+-+|..|++. |.+|.|+++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 219 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGL-GYEPTVMVRS 219 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCEEEEEeCC
Confidence 699999999999999999998 9999999963
No 246
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.61 E-value=0.037 Score=60.46 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=39.8
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCCC
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGIG 395 (567)
+.|++|++++.|++|..+ ++ +|.+. +|+ ++.++ .||+|+|......+|..+|+-
T Consensus 240 ~~GV~i~~~~~v~~i~~~--~~--------~v~~~-~g~--~i~~D-~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 240 NHDVELVFEDGVDALEEN--GA--------VVRLK-SGS--VIQTD-MLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HTTCEEECSCCEEEEEGG--GT--------EEEET-TSC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HcCCEEEECCeEEEEecC--CC--------EEEEC-CCC--EEEcC-EEEEccCCCCChHHHHhcCce
Confidence 478999999999999754 22 34443 333 68897 799999987777788877764
No 247
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.57 E-value=0.078 Score=55.80 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 180 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLE 180 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccC
Confidence 3699999999999999999998 99999999753
No 248
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.53 E-value=0.073 Score=56.43 Aligned_cols=32 Identities=28% Similarity=0.270 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 220 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHD 220 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCC
Confidence 699999999999999999998 99999999753
No 249
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.51 E-value=0.045 Score=58.49 Aligned_cols=32 Identities=31% Similarity=0.302 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHHhc---CCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEI---KKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~---~G~~VlVLE~G 150 (567)
.++|||+|..|+-+|..|++. .|.+|.++|+.
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~ 216 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPE 216 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecC
Confidence 699999999999999999872 27899999965
No 250
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.50 E-value=0.056 Score=53.67 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++++++
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~-~~~v~~~~~~~ 187 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPI-AKEVSIIHRRD 187 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-BSEEEEECSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhh-CCeEEEEEecC
Confidence 3699999999999999999998 99999999763
No 251
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.46 E-value=0.038 Score=58.42 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 4799999999999999999998 99999999753
No 252
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.38 E-value=0.029 Score=60.03 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 215 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQD 215 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999753
No 253
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.34 E-value=0.033 Score=59.31 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCC
Confidence 4799999999999999999998 99999999763
No 254
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.08 E-value=0.053 Score=57.83 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHHhc--CCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEI--KKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~--~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. +|.+|.|+|+++
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 3799999999999999999885 289999999753
No 255
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.05 E-value=0.064 Score=57.31 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHHhc--CCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEI--KKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~--~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. +|.+|.|+|+++
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN 227 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC
Confidence 3699999999999999999885 289999999753
No 256
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.95 E-value=0.23 Score=58.02 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
.|||||||..|+-+|..|++. |. +|.|+++.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~ 365 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRK 365 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEec
Confidence 799999999999999999998 86 89999975
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=94.17 E-value=0.24 Score=52.94 Aligned_cols=52 Identities=10% Similarity=0.102 Sum_probs=33.4
Q ss_pred HHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCE--EEEEEcCcEEEEcCCCCccH
Q psy1042 324 IRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKK--LRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 324 a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~--~~~v~A~k~VVLAAGa~~Tp 386 (567)
.++ +.|++|+++++|++|.-+ + .+..+.. .+|+ ..+|.++ .||.|+|.-.+|
T Consensus 281 ~L~-~~GV~v~~~~~v~~v~~~---~-----~~~~~~~-~dg~~~~~~i~ad-~viwa~Gv~~~~ 334 (502)
T 4g6h_A 281 HLE-NTSIKVHLRTAVAKVEEK---Q-----LLAKTKH-EDGKITEETIPYG-TLIWATGNKARP 334 (502)
T ss_dssp HHH-HTTCEEETTEEEEEECSS---E-----EEEEEEC-TTSCEEEEEEECS-EEEECCCEECCH
T ss_pred HHH-hcceeeecCceEEEEeCC---c-----eEEEEEe-cCcccceeeeccC-EEEEccCCcCCH
Confidence 344 579999999999998422 1 2222222 2232 3579997 799999965554
No 258
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.07 E-value=0.045 Score=57.54 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 116 ~~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
...+++|||+|.+|+.+|..|++. |.+|+|+|+++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCcc
Confidence 346899999999999999999998 999999998753
No 259
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.93 E-value=0.18 Score=58.53 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||+|..|+-+|..|++. |.+|.|||+.
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~ 316 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAAT-GGVVAVIDAR 316 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGG-TCCSEEEESC
T ss_pred eEEEEcCCHHHHHHHHHHHHc-CCcEEEEECC
Confidence 599999999999999999998 9999999975
No 260
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.61 E-value=0.064 Score=46.47 Aligned_cols=31 Identities=32% Similarity=0.553 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|+|+|..|..+|..|++. |++|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECC
Confidence 599999999999999999998 9999999975
No 261
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.59 E-value=0.067 Score=47.34 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3599999999999999999998 99999999754
No 262
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.59 E-value=0.065 Score=46.58 Aligned_cols=32 Identities=19% Similarity=0.448 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||.|..|..+|..|.+. |++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999998 99999999754
No 263
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.50 E-value=0.29 Score=54.52 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=29.0
Q ss_pred cEEEEC--CChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIG--AGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVG--sG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++||| +|..|+-+|..|++. |.+|.|+|+.
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~ 557 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPG 557 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecc
Confidence 599999 999999999999998 9999999975
No 264
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.38 E-value=0.079 Score=45.40 Aligned_cols=31 Identities=35% Similarity=0.547 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||+|..|..+|..|++. |.+|.++|+.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 599999999999999999998 9999999974
No 265
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.36 E-value=0.065 Score=55.29 Aligned_cols=35 Identities=20% Similarity=0.023 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 3699999999999999999999 9999999998653
No 266
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.29 E-value=0.068 Score=52.90 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++|||||..|+-+|..|++. |.+|.|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEecccc
Confidence 699999999999999999998 999999998754
No 267
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.89 E-value=0.084 Score=55.71 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCc
Confidence 3799999999999999999998 999999998754
No 268
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.76 E-value=0.1 Score=46.01 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|||+|..|..+|..|.+. |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 499999999999999999998 9999999974
No 269
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.55 E-value=0.1 Score=54.86 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|.+|+-+|..|++. |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCc
Confidence 3699999999999999999998 999999998754
No 270
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.33 E-value=0.1 Score=53.28 Aligned_cols=34 Identities=38% Similarity=0.499 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCe
Confidence 3699999999999999999998 999999998753
No 271
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=92.12 E-value=0.12 Score=50.96 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccc
Confidence 3699999999999999999998 99999999764
No 272
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.10 E-value=0.13 Score=42.49 Aligned_cols=31 Identities=23% Similarity=0.462 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCC-CeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G 150 (567)
.++|+|+|..|..+|..|.+. | .+|.++++.
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~ 38 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHD 38 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCC
Confidence 599999999999999999998 8 899999975
No 273
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=91.63 E-value=0.16 Score=53.49 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCc
Confidence 3799999999999999999998 999999998754
No 274
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.50 E-value=0.15 Score=43.84 Aligned_cols=31 Identities=26% Similarity=0.514 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|+|+|..|..+|..|.+. |.+|.++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 499999999999999999998 9999999974
No 275
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=91.22 E-value=0.19 Score=52.02 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPR 179 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCc
Confidence 4799999999999999999998 999999998754
No 276
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=90.64 E-value=0.23 Score=52.80 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDT 228 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccc
Confidence 4699999999999999999998 999999998754
No 277
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.54 E-value=0.2 Score=50.51 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.|+|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCC
Confidence 699999999999999999998 999999998754
No 278
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=90.49 E-value=0.23 Score=52.37 Aligned_cols=33 Identities=30% Similarity=0.307 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCc
Confidence 699999999999999999998 999999998743
No 279
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=90.16 E-value=0.24 Score=52.50 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCc
Confidence 4799999999999999999998 999999998754
No 280
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.03 E-value=0.22 Score=46.70 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=29.0
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|||+|..|..+|..|.+. |++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 89999999999999999998 99999999753
No 281
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.97 E-value=0.23 Score=49.61 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|.|||+|..|...|..+|.+ |++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECC
Confidence 499999999999999999999 9999999964
No 282
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=89.94 E-value=0.28 Score=51.36 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDK 181 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeecc
Confidence 699999999999999999999 999999998754
No 283
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=89.88 E-value=0.29 Score=51.23 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGER 182 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCc
Confidence 799999999999999999998 999999998754
No 284
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.79 E-value=0.28 Score=49.05 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 489999999999999999998 99999999864
No 285
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.42 E-value=0.28 Score=48.79 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 489999999999999999998 99999999864
No 286
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.20 E-value=0.32 Score=51.86 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL-GIDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHc-CCeEEEEecCCc
Confidence 3699999999999999999998 999999998754
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.08 E-value=0.28 Score=51.38 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCe-EEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWK-VLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~-VlVLE~G~~ 152 (567)
-.|+|||+|..|+-+|..|++. |.+ |.|+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCC
Confidence 3699999999999999999998 888 999998754
No 288
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=88.85 E-value=0.33 Score=51.24 Aligned_cols=33 Identities=9% Similarity=0.085 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.|+|||+|..|+-+|..|++. |.+|.|+++.+.
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~ 231 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTA 231 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred EEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCC
Confidence 699999999999999999998 999999998754
No 289
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=88.72 E-value=0.34 Score=52.20 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.|+|||+|..|+-+|..|++. |.+|.|+++.+.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQY 213 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCCC
T ss_pred ceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 4799999999999999999998 9999999998763
No 290
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.67 E-value=0.36 Score=47.71 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|.|||+|..|..+|..|+++ |++|+++++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 399999999999999999998 9999999975
No 291
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.66 E-value=0.32 Score=52.48 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.|+|||+|..|+-+|..|++. +.+|.|+++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCCc
Confidence 3699999999999999999998 9999999998763
No 292
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.56 E-value=0.37 Score=47.16 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|..+|..|+++ |++|++.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 489999999999999999999 99999999753
No 293
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=88.38 E-value=0.41 Score=50.38 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNTL 210 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCc
Confidence 3699999999999999999998 999999998753
No 294
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.35 E-value=0.4 Score=46.09 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
..|+|||+|..|+.+|..|++. |. +|.|++....
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCCc
Confidence 4699999999999999999999 97 8999997643
No 295
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=88.29 E-value=0.38 Score=51.99 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.|+|||+|..|+-+|..|++. +.+|.|+++.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 3699999999999999999998 9999999998753
No 296
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.25 E-value=0.45 Score=46.30 Aligned_cols=31 Identities=16% Similarity=0.153 Sum_probs=28.9
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+.|||+|..|...|..|+++ |++|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 78999999999999999998 99999999764
No 297
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.11 E-value=0.42 Score=45.11 Aligned_cols=31 Identities=6% Similarity=0.164 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEec
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~ 149 (567)
--|+|||+|-.|...|..|.+. |.+|+|+..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE-GAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG-CCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEECC
Confidence 3599999999999999999999 999999984
No 298
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.02 E-value=0.51 Score=43.96 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..+.|||+|..|...|..|+++ |.+|.++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3599999999999999999998 99999998754
No 299
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=87.96 E-value=0.43 Score=47.56 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCc
Confidence 4699999999999999999998 999999998643
No 300
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=87.92 E-value=0.49 Score=48.88 Aligned_cols=35 Identities=31% Similarity=0.309 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 3699999999999999999998 9999999998764
No 301
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.85 E-value=0.34 Score=47.76 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 489999999999999999999 99999999863
No 302
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=87.84 E-value=0.48 Score=48.77 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcc
Confidence 3699999999999999999998 9999999998754
No 303
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.75 E-value=0.4 Score=48.17 Aligned_cols=31 Identities=32% Similarity=0.469 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-+.|||+|..|+..|..|+++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 489999999999999999998 9999999975
No 304
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.61 E-value=0.35 Score=47.22 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~ 45 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPT-GCKLTLVSPD 45 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGG-TCEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 599999999999999999999 9999999853
No 305
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=87.32 E-value=0.52 Score=49.59 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCc
Confidence 3699999999999999999998 999999998754
No 306
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.05 E-value=0.48 Score=42.83 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||.|..|..+|..|.+..|++|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 599999999999999999873289999999754
No 307
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=86.98 E-value=0.52 Score=46.58 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 3699999999999999999998 9999999998654
No 308
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=86.93 E-value=0.48 Score=51.64 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||||..|+-+|..|++. |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 599999999999999999998 9999999976
No 309
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.75 E-value=0.57 Score=46.57 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
-+.|||+|..|..+|..|++. |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 599999999999999999998 98 999999864
No 310
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.59 E-value=0.56 Score=46.16 Aligned_cols=31 Identities=29% Similarity=0.311 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-+.|||+|..|...|..|+++ |++|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECC
Confidence 489999999999999999998 9999999874
No 311
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.31 E-value=0.56 Score=49.73 Aligned_cols=33 Identities=33% Similarity=0.549 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.-+.|||.|..|+.+|..|+++ |++|+++++..
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 4689999999999999999999 99999999753
No 312
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.31 E-value=0.59 Score=46.37 Aligned_cols=31 Identities=32% Similarity=0.370 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||+|..|+..|..|+ + |.+|.++.|..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 4899999999999999999 8 99999999864
No 313
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.99 E-value=0.62 Score=46.44 Aligned_cols=31 Identities=32% Similarity=0.638 Sum_probs=28.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-.+.|||+|..|+..|..|+++ |.+|.++ +-
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 3599999999999999999998 9999999 53
No 314
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.93 E-value=1.3 Score=46.54 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-|.|||+|..|...|..|+++ |++|+++|+...
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 599999999999999999999 999999997543
No 315
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.57 E-value=0.65 Score=46.42 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|...|..|+++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999999 99999999753
No 316
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=85.46 E-value=0.77 Score=44.94 Aligned_cols=35 Identities=26% Similarity=0.153 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCC
Confidence 4799999999999999999998 9999999998654
No 317
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.27 E-value=0.44 Score=50.24 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-+||+|+|-.|..+|..|++. |++|+|||+.+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~~ 37 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDGD 37 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 499999999999999999998 999999998643
No 318
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.19 E-value=0.69 Score=48.01 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.|||||.|..|..+|..|.+. |..|+|||+.+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~ 38 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPD 38 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 499999999999999999998 999999997644
No 319
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=84.74 E-value=0.73 Score=45.94 Aligned_cols=29 Identities=28% Similarity=0.374 Sum_probs=27.9
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEec
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~ 149 (567)
+.|||+|..|...|..|+++ |++|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 78999999999999999998 999999997
No 320
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.73 E-value=0.79 Score=46.87 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
.-|||+|+|.+|..+|..|... |. +|.|+|+-+
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 5699999999999999999998 98 999999864
No 321
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=84.69 E-value=0.79 Score=49.36 Aligned_cols=31 Identities=13% Similarity=0.225 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||||..|+=.|..+++. |.+|+|+++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~ 255 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSL-GYDVTVAVRS 255 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEeccc
Confidence 599999999999999999998 9999999974
No 322
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=84.49 E-value=0.84 Score=44.32 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-++|+|+|.+|..+|..|++. |.+|.|+.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 499999999999999999999 99999998753
No 323
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=84.42 E-value=1.1 Score=44.67 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-+.|||+|..|..+|..|+.+ |+ +|.|+++..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 599999999999999999998 98 999999864
No 324
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.40 E-value=0.46 Score=41.15 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-++|||+|..|..+|..|++. |.+|.++++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 599999999999999999997 99999999753
No 325
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=84.33 E-value=0.79 Score=49.04 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.++|||+|..|+-+|..|++. |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 499999999999999999998 9999999974
No 326
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.32 E-value=0.82 Score=46.01 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.+.|||+|..|...|..|++. |++|.++++.
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 599999999999999999998 9999999874
No 327
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.31 E-value=0.82 Score=46.42 Aligned_cols=33 Identities=36% Similarity=0.312 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.+.|||+|.-|.+.|..|+++ |.+|.+..+.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3599999999999999999999 99999999854
No 328
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=84.26 E-value=0.8 Score=48.09 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|+.+|..|+++ |++|+++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 489999999999999999999 99999999764
No 329
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=84.23 E-value=1.7 Score=40.91 Aligned_cols=56 Identities=18% Similarity=0.269 Sum_probs=39.8
Q ss_pred HhhHHHHhcC-CCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHH
Q psy1042 319 AFIRPIRKKR-KNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPK 387 (567)
Q Consensus 319 ~~L~~a~~~~-~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~ 387 (567)
.+|...++ + +|++++ +++|++|..+ ++ ++.+|.+.+ |. +++|+ .||+|+|.+...+
T Consensus 72 ~~l~~~~~-~~~gv~i~-~~~v~~i~~~--~~-----~v~~v~~~~-g~--~i~a~-~VV~A~G~~s~~~ 128 (232)
T 2cul_A 72 ARAKYLLE-GLRPLHLF-QATATGLLLE--GN-----RVVGVRTWE-GP--PARGE-KVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHHHHH-TCTTEEEE-ECCEEEEEEE--TT-----EEEEEEETT-SC--CEECS-EEEECCTTCSSCE
T ss_pred HHHHHHHH-cCCCcEEE-EeEEEEEEEe--CC-----EEEEEEECC-CC--EEECC-EEEECCCCChhhc
Confidence 45555555 4 499999 6799999876 34 777887643 33 68896 7999999865443
No 330
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=84.14 E-value=0.82 Score=44.18 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. | +|.+++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCC
Confidence 4799999999999999999998 8 999999764
No 331
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.00 E-value=0.79 Score=48.33 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|..+|..|+++ |++|+++++..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999753
No 332
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=83.99 E-value=0.8 Score=47.85 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=28.8
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+.|||.|..|+..|..|+++ |++|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999998 99999999753
No 333
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.96 E-value=0.88 Score=45.59 Aligned_cols=33 Identities=36% Similarity=0.491 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.-+.|||+|..|+..|..|+++ |.+|.++.+.+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-GEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 4599999999999999999999 99999998753
No 334
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=83.95 E-value=0.96 Score=45.39 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-+.|||+|..|.++|..|+.. |+ +|.|+|...
T Consensus 11 kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 599999999999999999998 88 999999764
No 335
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.85 E-value=1 Score=46.46 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
--|+|||+|.+|+.+|..|... |.+|+++++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4699999999999999999888 99999999754
No 336
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.80 E-value=0.91 Score=46.31 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
+.-|||+|+|.+|..+|..|... |. +|.|+++-+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~Gl 227 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKGI 227 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCc
Confidence 35699999999999999999998 88 8999998643
No 337
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.38 E-value=1 Score=45.25 Aligned_cols=34 Identities=24% Similarity=0.533 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
.-|+|||+|..|+.+|..|+.. |. ++.|++....
T Consensus 35 ~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~V 69 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 69 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCEe
Confidence 5699999999999999999998 86 6889987644
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=83.32 E-value=0.99 Score=44.68 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=28.5
Q ss_pred EEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
+.|||+|..|.++|..|+.. |. .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 78999999999999999998 88 999999753
No 339
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=83.23 E-value=0.97 Score=44.55 Aligned_cols=31 Identities=29% Similarity=0.412 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|...|..|+ + |++|.+.++.+
T Consensus 14 ~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 4899999999999999999 8 99999999754
No 340
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.21 E-value=0.99 Score=47.34 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||.|.+|+++|..|.+. |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 599999999999999999998 99999999865
No 341
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=83.17 E-value=1.1 Score=41.46 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=28.1
Q ss_pred EEEEC-CChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIG-AGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVG-sG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
+.||| +|..|..+|..|++. |++|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATL-GHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 78999 999999999999998 9999999875
No 342
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=83.09 E-value=1 Score=47.51 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
.+.|||.|..|+.+|..|++++|+ +|+++++...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 599999999999999999997689 9999998765
No 343
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=82.98 E-value=1 Score=47.34 Aligned_cols=34 Identities=12% Similarity=0.036 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
-.|+|||+|..|+-+|..|.+. |. +|.|+++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCc
Confidence 3699999999999999999998 87 5999998643
No 344
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=82.90 E-value=1.1 Score=46.81 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
...+.|||.|..|+.+|..|+++ |++|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 46789999999999999999999 999999998754
No 345
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.82 E-value=1.1 Score=46.87 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
...+.|||.|..|+.+|..||+. |++|+.+|-..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 45799999999999999999999 99999998643
No 346
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=82.79 E-value=1.2 Score=44.66 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-+.|||+|..|..+|..|+.. |+ +|.|+|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 599999999999999999998 88 999999764
No 347
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.75 E-value=1 Score=47.47 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|+|+|..|..+|..|+.. |.+|++.|+.
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~ 297 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQA-GARVIVTEID 297 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 489999999999999999999 9999999864
No 348
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=82.63 E-value=1 Score=47.35 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=37.8
Q ss_pred CCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe--------------CCEEEEEEcCcEEEEcCCCCccH
Q psy1042 328 RKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY--------------KKKLRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 328 ~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~--------------~g~~~~v~A~k~VVLAAGa~~Tp 386 (567)
+.|++|++++.+++|.-+++++ ++.+|++.+ +|+..++.++ .||+|+|--..+
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~~-----~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDGR-----RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTSS-----SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCCc-----eEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 3789999999999997652221 366777653 3455689997 799999965554
No 349
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=82.51 E-value=1.2 Score=42.40 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
--+.|||.|..|..+|..|+++ |++|++.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 3589999999999999999999 99999999754
No 350
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.40 E-value=1.2 Score=41.53 Aligned_cols=31 Identities=29% Similarity=0.356 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-+.|||+|..|...|..|++. |++|.++++.
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~ 60 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGS-GFKVVVGSRN 60 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEEccCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 499999999999999999998 9999999875
No 351
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=82.31 E-value=1.1 Score=45.88 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
--|+|||+|..|..+|..|... |.+|+++++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999888 99999999754
No 352
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=81.84 E-value=1.2 Score=43.72 Aligned_cols=34 Identities=35% Similarity=0.542 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
..-|+|||+|..|+.+|..|+.. |. ++.|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 45799999999999999999999 86 799998653
No 353
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.77 E-value=1.3 Score=42.59 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
.-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 4799999999999999999998 87 788998653
No 354
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.69 E-value=1.2 Score=45.24 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|+|+|+|..|..+|..|... |.+|+++++.
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~ 198 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGM-GAQVTILDVN 198 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 599999999999999999998 9999999964
No 355
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=81.52 E-value=1.1 Score=44.38 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.++|||+|..|+-+|..|++. | +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 3799999999999999999998 7 799999763
No 356
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=81.39 E-value=1.3 Score=43.19 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-+.|||.|..|...|..|+++ |++|.+.++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 388999999999999999998 999999997643
No 357
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=81.37 E-value=1.3 Score=44.96 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
--|+|+|+|.+|..+|..|... |.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3699999999999999999988 9999999975
No 358
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.36 E-value=1.5 Score=42.52 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
--++|||+|.+|.++|..|++. |.+|.|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ-GLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 3599999999999999999999 899999988643
No 359
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=80.82 E-value=1.3 Score=44.09 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=28.6
Q ss_pred EEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
+.|||+|..|.++|..|++. |. .|.++++..
T Consensus 3 I~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 78999999999999999998 98 999999753
No 360
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=80.81 E-value=0.88 Score=46.16 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||+|..|...|..|+++ |++|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999998 99999998753
No 361
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.80 E-value=1.4 Score=43.57 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 599999999999999999999 99999999754
No 362
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=80.74 E-value=1.4 Score=43.40 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 599999999999999999998 99999998754
No 363
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=80.73 E-value=0.98 Score=47.20 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-|.|||.|.+|+++|..|++. |++|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCC
Confidence 389999999999999999888 999999998654
No 364
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=80.68 E-value=1.1 Score=43.57 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-++|+|+|.+|..+|..|++. |.+|.|+.|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 499999999999999999999 89999998763
No 365
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.68 E-value=1.2 Score=47.06 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|...|..|+++ |++|++.++..
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 489999999999999999999 99999999754
No 366
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.62 E-value=0.75 Score=43.38 Aligned_cols=31 Identities=16% Similarity=0.098 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+||||+|..|..+|..|.+. |. |+++|+.+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 599999999999999999998 99 99999754
No 367
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=80.52 E-value=1.4 Score=45.53 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
--|+|||+|.+|+.+|..|... |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3699999999999999998887 99999999753
No 368
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=80.13 E-value=1.1 Score=46.17 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=27.1
Q ss_pred cEEEECCChhHHHHHHHHHh-cCCCeEEEEe
Q psy1042 119 DFIIIGAGSAGCVLANRLSE-IKKWKVLLLE 148 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae-~~G~~VlVLE 148 (567)
.+.|||+|..|+..|..|++ + |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 48999999999999999998 6 99999998
No 369
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=80.08 E-value=1.3 Score=43.14 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+.|||.|..|...|..|++. |++|.+.++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 388999999999999999999 999999997643
No 370
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=80.03 E-value=1.4 Score=43.34 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.+.|||.|..|...|..|+++ |++|.+.++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 3599999999999999999999 999999997654
No 371
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=79.82 E-value=1.5 Score=43.45 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCC--CeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G--~~VlVLE~G~ 151 (567)
-+.|||+|..|..+|..|+++ | ..|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 388999999999999999998 8 6999999854
No 372
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=79.79 E-value=1.5 Score=43.20 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
.++|||+|.+|..+|..|++. |. +|.|+.|.
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~ 174 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLST-AAERIDMANRT 174 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECSS
T ss_pred EEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 599999999999999999998 97 99999875
No 373
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=79.63 E-value=1.6 Score=41.78 Aligned_cols=30 Identities=17% Similarity=0.461 Sum_probs=28.1
Q ss_pred EEEECCChhHHHHHHHHHhcCC-CeEEEEecC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKK-WKVLLLEAG 150 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G 150 (567)
+.|||+|..|...|..|++. | .+|.++++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~ 33 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRG 33 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHH-CSCEEEEECSS
T ss_pred EEEECchHHHHHHHHHHHHC-CCCeEEEECCC
Confidence 78999999999999999998 9 999999875
No 374
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.62 E-value=1.8 Score=41.82 Aligned_cols=33 Identities=30% Similarity=0.413 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-|+|.|+|..|..++.+|.++ |++|.++.|...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 389999999999999999999 999999998643
No 375
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=79.62 E-value=1.9 Score=39.52 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=28.3
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|+|+ |..|..++.+|+++ |++|.++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 799995 99999999999999 99999999864
No 376
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=79.57 E-value=1.2 Score=45.26 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCC-------CeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK-------WKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G-------~~VlVLE~G~~ 152 (567)
-+.|||+|..|+..|..|+++ | .+|.++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 499999999999999999998 8 99999998654
No 377
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=79.53 E-value=1.5 Score=43.06 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=29.2
Q ss_pred cEEEEC-CChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIG-AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVG-sG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+.||| .|..|.+.|..|++. |++|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 499999 999999999999998 99999998653
No 378
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.46 E-value=1.6 Score=42.91 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+.|||.|..|...|..|++. |++|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 489999999999999999998 99999998753
No 379
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=79.38 E-value=1.7 Score=43.17 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
-++|+|+|.+|.++|..|++. |. +|.|+.|.
T Consensus 156 ~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 156 KMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred EEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 599999999999999999998 98 89999875
No 380
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=79.35 E-value=1.5 Score=45.63 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
..-|||.|..|+.+|..|+++ |++|+++++.+.
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~ 45 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQ 45 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred ccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHH
Confidence 478999999999999999999 999999997653
No 381
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=79.27 E-value=1.7 Score=43.29 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
-+.|||+|..|..+|..|+.. |+ .|.++|..
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 499999999999999999998 99 99999976
No 382
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=79.23 E-value=1.7 Score=44.43 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
--|+|||+|..|..+|..|... |.+|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM-GATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3599999999999999999988 9999999964
No 383
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=79.23 E-value=1.2 Score=46.62 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=38.1
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAI 383 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~ 383 (567)
|...++ +.|++|+++++|++|..+.+++ ++++|.+ +|+ ++.|+ .||+|+|.+
T Consensus 248 l~~~~~-~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~--~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 248 FARLSA-IYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT--KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHHHHH-HTTCEEECSCCCCEEEEETTTT-----EEEEEEE--TTE--EEECS-CEEECGGGC
T ss_pred HHHHHH-HcCCEEECCCEEEEEEEECCCC-----eEEEEEE--CCe--EEECC-EEEECCCcc
Confidence 333444 4799999999999998762124 7888876 343 58896 699999976
No 384
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=79.23 E-value=1.4 Score=49.33 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=29.9
Q ss_pred cEEEEC--CChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIG--AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVG--sG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.|+||| +|..|+-+|..|++. |.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 699998 999999999999998 99999999864
No 385
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=79.20 E-value=1.9 Score=42.71 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=28.9
Q ss_pred EEEECCChhHHHHHHHHHhc-CCCeEEEEecCCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 152 (567)
+.|||+|..|..+|..|++. .|..|.++|+...
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 78999999999999999985 2789999998643
No 386
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.17 E-value=1.7 Score=41.99 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=28.4
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+.|||+|..|...|..|++. |++|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999998 99999998753
No 387
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=79.09 E-value=1.8 Score=44.26 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.|+|||+|.+|+.+|..|... |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999988887 99999999753
No 388
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.09 E-value=1.6 Score=43.41 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|++. |++|.+.++.+
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 599999999999999999998 99999998754
No 389
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=78.96 E-value=1.7 Score=43.91 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
..-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 35699999999999999999999 87 799999654
No 390
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=78.92 E-value=1.2 Score=44.80 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCC-------CeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK-------WKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G-------~~VlVLE~G~~ 152 (567)
-+.|||+|..|...|..|+++ | .+|.++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 599999999999999999998 8 89999998654
No 391
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=78.92 E-value=1.4 Score=43.08 Aligned_cols=30 Identities=23% Similarity=0.431 Sum_probs=27.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|+|+|..|..+|..|++. | +|.|+.|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 499999999999999999999 9 99999874
No 392
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=78.92 E-value=1.8 Score=42.26 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=28.5
Q ss_pred cEEEEC-CChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIG-AGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVG-sG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|+| +|.+|..+|..|++. |.+|.++.|.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 489999 999999999999999 9999999874
No 393
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=78.92 E-value=1.8 Score=42.38 Aligned_cols=31 Identities=23% Similarity=0.332 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
-++|+|+|.+|.++|..|++. |. +|.|+.|.
T Consensus 129 ~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~ 160 (283)
T 3jyo_A 129 SVVQVGAGGVGNAVAYALVTH-GVQKLQVADLD 160 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 599999999999999999998 98 69999875
No 394
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.73 E-value=1.4 Score=42.17 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=27.5
Q ss_pred EEEECC-C-hhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIGA-G-SAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVGs-G-~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
++|.|+ | ..|..+|.+|+++ |++|+++.+.
T Consensus 25 vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~ 56 (266)
T 3o38_A 25 VLVTAAAGTGIGSTTARRALLE-GADVVISDYH 56 (266)
T ss_dssp EEESSCSSSSHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCCCchHHHHHHHHHHC-CCEEEEecCC
Confidence 899998 7 5999999999999 9999999875
No 395
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=78.69 E-value=2 Score=38.82 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=28.6
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|+|+ |..|..++.+|+++ |++|.++.|..
T Consensus 6 ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 899998 99999999999998 99999999754
No 396
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.67 E-value=1.9 Score=41.58 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|+|+|+|..|..++.+|.++ |++|.++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 499999999999999999999 99999998864
No 397
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=78.64 E-value=1.7 Score=46.96 Aligned_cols=34 Identities=24% Similarity=0.533 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
.-|+|||+|..|+.+|..|+.. |. ++.|++....
T Consensus 327 arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~V 361 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 361 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCCC
Confidence 5799999999999999999998 86 7999997644
No 398
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=78.53 E-value=2 Score=39.61 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=28.6
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|+|+ |..|..+|.+|+++ |++|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 899998 99999999999999 99999998753
No 399
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=78.45 E-value=2 Score=40.12 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=29.7
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-++|.|+ |..|..+|.+|++. |++|.++.|...
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~ 56 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEE 56 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGG
T ss_pred eEEEECCCChHHHHHHHHHHhC-CCeEEEEECChH
Confidence 4899998 99999999999998 999999998643
No 400
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.42 E-value=1.7 Score=42.90 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|++. |.+|.++++..
T Consensus 32 ~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 32 KIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred eEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 599999999999999999998 99999998753
No 401
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=78.22 E-value=1.1 Score=41.99 Aligned_cols=32 Identities=31% Similarity=0.575 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEE-EecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLL-LEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlV-LE~G~ 151 (567)
-+.|||+|..|...|..|+++ |++|.+ .++..
T Consensus 25 kI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 599999999999999999998 999998 77653
No 402
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=78.22 E-value=2.4 Score=42.25 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-+.|||+|..|..+|..|+.. |+ +|.|+|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 599999999999999999998 88 999999754
No 403
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=78.15 E-value=1.8 Score=41.96 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-++|||+|..|..+|..|++. |.+|.+.++..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 89999998753
No 404
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=77.84 E-value=1.8 Score=46.73 Aligned_cols=34 Identities=24% Similarity=0.533 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
.-|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 328 ~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~V 362 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 362 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSBC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 5799999999999999999998 87 7999996543
No 405
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=77.67 E-value=1.8 Score=42.97 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCC-CeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G-~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|+++ | ++|.+.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 499999999999999999999 9 9999999864
No 406
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=77.24 E-value=2.2 Score=41.03 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-++|||+|.+|.++|..|++. |. +|.|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 699999999999999999998 88 899998753
No 407
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=77.21 E-value=2 Score=42.51 Aligned_cols=32 Identities=31% Similarity=0.426 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-+.|||+|..|..+|..|+.. |. +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 489999999999999999998 86 899999753
No 408
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.20 E-value=2 Score=41.94 Aligned_cols=31 Identities=16% Similarity=0.311 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.+.|||.|..|...|..|++. |++|.++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 599999999999999999998 9999999875
No 409
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=77.11 E-value=2 Score=42.56 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
-+.|||.|..|...|..|+++ |+ +|.+.++.
T Consensus 26 ~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 26 KLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 599999999999999999999 99 99999974
No 410
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=76.93 E-value=2.1 Score=41.36 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=27.8
Q ss_pred EEEECCChhHHHHHHHHHhcCCC--eEEEEecC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G 150 (567)
+.|||.|..|...|..|++. |+ +|++.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence 88999999999999999998 88 89999865
No 411
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=76.83 E-value=2.2 Score=41.69 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-.++|+|+|.+|.++|..|++. |. +|.|+-|-.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 3699999999999999999998 98 899998753
No 412
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=76.74 E-value=2.3 Score=41.66 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+.|||.|..|..+|..|... |.+|++.++..
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999988 99999999753
No 413
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.74 E-value=2.1 Score=41.60 Aligned_cols=31 Identities=19% Similarity=0.442 Sum_probs=28.9
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-+.|||+ |..|...|..|++. |++|.++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4999999 99999999999998 9999999875
No 414
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=76.72 E-value=2.7 Score=39.50 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=27.9
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|.|+ |..|..+|.+|+++ |++|+++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 788887 99999999999998 99999998753
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.71 E-value=2.2 Score=42.42 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
-+.|||.|..|.+.|..|++. |+ +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 599999999999999999998 99 999998753
No 416
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=76.70 E-value=2.1 Score=45.90 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 153 (567)
-.|+|||+|..|+-+|..|++. |.+|.|+++.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCcc
Confidence 3699999999999999999998 9999999987643
No 417
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=76.68 E-value=2.2 Score=41.62 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=28.5
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+.|||.|..|...|..|++. |++|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999999999999999998 99999998753
No 418
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=76.63 E-value=2.3 Score=41.30 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 122 ~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~~ 154 (272)
T 3pwz_A 122 RVLLLGAGGAVRGALLPFLQA-GPSELVIANRDM 154 (272)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-CCSEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 599999999999999999998 95 999998753
No 419
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=76.54 E-value=2.2 Score=46.01 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-.+||||.|-.|..+|..|.+. |..|++||+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 4699999999999999999998 999999998654
No 420
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=76.42 E-value=2.4 Score=41.71 Aligned_cols=32 Identities=16% Similarity=0.285 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
--+.|||.|..|..+|..|... |.+|++.++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~ 189 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL-GANVKVGARS 189 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCEEEEEECC
Confidence 3599999999999999999988 9999999975
No 421
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=76.30 E-value=1.8 Score=42.24 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-++|||+|.+|..+|..|++. |. +|.|+.|..
T Consensus 119 ~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 119 YILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 599999999999999999998 98 899998754
No 422
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=76.10 E-value=2.3 Score=43.19 Aligned_cols=31 Identities=16% Similarity=0.280 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|+|+|.|..|..+|..|.+. |.+|++.++.
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 499999999999999999999 9999999854
No 423
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=76.09 E-value=2.1 Score=44.95 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|+|||+|..|...|..|.+. |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 499999999999999999999 9999999963
No 424
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=76.04 E-value=2.5 Score=41.97 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
--++|+|+|.+|.++|..|++. |. +|.|+-|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 3599999999999999999998 98 89999875
No 425
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=76.02 E-value=2.1 Score=43.10 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
..|+|||.|..|+.+|..|+.. |. ++.|+|-..
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 5799999999999999999998 87 799998553
No 426
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=75.99 E-value=1.9 Score=48.16 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|..+|..|+++ |+.|+++++.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 499999999999999999999 99999999754
No 427
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=75.84 E-value=2.5 Score=41.31 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 128 ~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 160 (281)
T 3o8q_A 128 TILLIGAGGAARGVLKPLLDQ-QPASITVTNRTF 160 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSH
T ss_pred EEEEECchHHHHHHHHHHHhc-CCCeEEEEECCH
Confidence 599999999999999999998 95 999998753
No 428
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=75.68 E-value=2.5 Score=42.88 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999999753
No 429
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.47 E-value=2.4 Score=41.35 Aligned_cols=31 Identities=23% Similarity=0.197 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
.+.|||.|..|...|..|++. |++|.++++.
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 36 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKE-GVTVYAFDLM 36 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 599999999999999999998 9999999875
No 430
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=75.47 E-value=2.6 Score=41.94 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=27.9
Q ss_pred cEEEECCChhHHH-HHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCV-LANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~-aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+.|||.|.+|++ +|..|.+. |++|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 4899999999997 77778888 99999999764
No 431
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=75.44 E-value=2.4 Score=41.87 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 11 ~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 11 DVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999998 99999998753
No 432
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=75.15 E-value=1.1 Score=46.53 Aligned_cols=50 Identities=18% Similarity=0.182 Sum_probs=37.8
Q ss_pred hHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCC
Q psy1042 321 IRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAI 383 (567)
Q Consensus 321 L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~ 383 (567)
|...++ +.|++|+++++|++|..+ ++ ++++|.. +|+ ++.|+ .||+|+|..
T Consensus 240 l~~~~~-~~G~~i~~~~~V~~I~~~--~~-----~v~~v~~--~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 240 FARLSA-IYGGTYMLNKPVDDIIME--NG-----KVVGVKS--EGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHHHH-HHTCCCBCSCCCCEEEEE--TT-----EEEEEEE--TTE--EEECS-EEEECGGGC
T ss_pred HHHHHH-HcCCEEECCCEEEEEEEe--CC-----EEEEEEE--CCe--EEECC-EEEECCCCC
Confidence 443444 478999999999999886 35 7888873 443 58896 799999976
No 433
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=75.06 E-value=2.9 Score=38.61 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=27.4
Q ss_pred EEEEC-CChhHHHHHHHHH-hcCCCeEEEEecC
Q psy1042 120 FIIIG-AGSAGCVLANRLS-EIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVG-sG~aG~~aA~~La-e~~G~~VlVLE~G 150 (567)
++|+| +|..|..+|.+|+ +. |++|.++.|.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQ 39 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESS
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecC
Confidence 89999 5999999999999 77 9999999875
No 434
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=75.03 E-value=2.5 Score=42.27 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC--eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G 150 (567)
-+.|||+|..|.++|..|+.. |. .|.++|..
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 489999999999999999998 87 89999974
No 435
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.81 E-value=2.3 Score=40.64 Aligned_cols=29 Identities=28% Similarity=0.232 Sum_probs=26.8
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEec
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~ 149 (567)
+.|||.|..|...|..|++. |++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 78999999999999999998 999999765
No 436
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=74.74 E-value=2.6 Score=41.48 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=28.3
Q ss_pred EEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
+.|||+|..|.++|..|+.. |. .|.|+++..
T Consensus 3 I~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 78999999999999999998 87 899999754
No 437
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=74.70 E-value=2.4 Score=40.42 Aligned_cols=32 Identities=16% Similarity=0.307 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCC----CeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK----WKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G----~~VlVLE~G~ 151 (567)
-+.|||.|..|...|..|+++ | .+|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCc
Confidence 489999999999999999998 8 6899998753
No 438
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=74.63 E-value=0.98 Score=47.29 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=38.4
Q ss_pred hhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHH
Q psy1042 320 FIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKIL 389 (567)
Q Consensus 320 ~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LL 389 (567)
.|...+. +.|++|+++++|++|..++ + ++..|.+ ++. ++.|+ .||+|+++....+||
T Consensus 239 ~l~~~l~-~~g~~i~~~~~V~~i~~~~--~-----~~~~v~~--~~~--~~~ad-~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 239 ALETHLT-SRGVSVLRGQPVCGLSLQA--E-----GRWKVSL--RDS--SLEAD-HVISAIPASVLSELL 295 (477)
T ss_dssp HHHHHHH-HTTCEEECSCCCCEEEECG--G-----GCEEEEC--SSC--EEEES-EEEECSCHHHHHHHS
T ss_pred HHHHHHH-hcCCEEEeCCEEEEEEEcC--C-----ceEEEEE--CCe--EEEcC-EEEECCCHHHHHHhc
Confidence 3444444 4699999999999998763 2 2234433 332 58896 699999976555553
No 439
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=74.58 E-value=1.9 Score=42.33 Aligned_cols=31 Identities=16% Similarity=0.228 Sum_probs=28.0
Q ss_pred cEEEECCChhHHHHHHHHHhcC----C-CeEEEEec
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIK----K-WKVLLLEA 149 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~----G-~~VlVLE~ 149 (567)
.+.|||+|..|...|..|++++ | .+|.++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5999999999999999999862 7 89999987
No 440
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=74.39 E-value=3.1 Score=41.47 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
-+.|||+|..|.++|..|+.. |+ .|.|+|....
T Consensus 9 kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAEG 42 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCch
Confidence 599999999999999999998 88 9999997543
No 441
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=74.34 E-value=2.5 Score=44.70 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|+++ |++|.+.++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 589999999999999999998 99999998753
No 442
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=74.06 E-value=2.7 Score=41.57 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
.-+.|||+|..|..+|..|+.. |. .|.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 3599999999999999999998 88 999999754
No 443
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=74.06 E-value=2.4 Score=44.79 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-++.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 3699999999999999999998 99999998753
No 444
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=74.02 E-value=2.8 Score=40.29 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.++|||+|..|..+|..|.+. |.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 699999999999999999998 88999998753
No 445
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=73.92 E-value=2.8 Score=38.59 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=28.4
Q ss_pred EEEEC-CChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIG-AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVG-sG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|.| +|..|..++.+|+++ |++|.++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTS-SCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCc
Confidence 78999 799999999999998 99999999864
No 446
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=73.83 E-value=2.6 Score=41.85 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=28.7
Q ss_pred ccEEEECCC-hhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAG-SAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG-~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-.++|||+| +.|..+|..|+.. |.+|.|+++.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 579999999 6799999999998 9999999864
No 447
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=73.80 E-value=1.2 Score=42.18 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEec
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~ 149 (567)
.+.|||.|..|.+.|..|.++ |++|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHT-TCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHC-CCEEEEecC
Confidence 589999999999999999999 999999886
No 448
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=73.68 E-value=2.7 Score=40.24 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCe-EEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWK-VLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~-VlVLE~G 150 (567)
-+.|||+|..|...|..|++. |++ |.++++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRK-GFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCC
Confidence 499999999999999999998 998 8899864
No 449
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=73.62 E-value=2.7 Score=44.02 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=36.4
Q ss_pred CCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEe---------------CCEEEEEEcCcEEEEcCCCCccH
Q psy1042 329 KNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFY---------------KKKLRRARAKKEVISSAGAINSP 386 (567)
Q Consensus 329 ~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~---------------~g~~~~v~A~k~VVLAAGa~~Tp 386 (567)
.+++|++++.+.+|.-+ + ++.+|++.+ +|+..++.++ .||+|+|--..+
T Consensus 265 ~gv~i~~~~~~~~i~~~---~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---R-----KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS---S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC---C-----cEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 68999999999999754 2 466676652 3555679997 799999966555
No 450
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=73.58 E-value=2.8 Score=44.27 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
.+.|||.|..|...|..|+++ |++|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 589999999999999999998 99999999754
No 451
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.24 E-value=2.8 Score=43.69 Aligned_cols=34 Identities=26% Similarity=0.578 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 117 ~yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
..-|+|||+|..|+.+|..||.. |. ++.|+|...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCE
Confidence 35799999999999999999998 87 799999654
No 452
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=73.24 E-value=2.9 Score=41.84 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC--eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G 150 (567)
-+.|||+|..|.++|..|+.. |. .|.++|..
T Consensus 23 kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 23 KITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp EEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 599999999999999999998 87 89999964
No 453
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=73.17 E-value=2.6 Score=44.49 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhc-CCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~-~G~~VlVLE~G~ 151 (567)
-+.|||.|..|+..|..|+++ +|++|+++++..
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 599999999999999999997 268999998753
No 454
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=73.13 E-value=2.9 Score=42.06 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+.|||.|..|.+.|..|.+. |++|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999753
No 455
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=73.00 E-value=2.7 Score=43.72 Aligned_cols=29 Identities=31% Similarity=0.452 Sum_probs=27.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC---eEEEEe
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW---KVLLLE 148 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~---~VlVLE 148 (567)
-++|+|+|.+|..+|..|.+. |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 599999999999999999998 97 899999
No 456
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=72.98 E-value=3.3 Score=39.82 Aligned_cols=31 Identities=13% Similarity=-0.005 Sum_probs=27.8
Q ss_pred EEEECC---ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA---GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs---G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|.|+ |..|..+|.+|++. |++|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 899997 68999999999999 99999998754
No 457
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=72.93 E-value=2.6 Score=43.41 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=27.4
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+.|||.|..|+.+|..|++ |++|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 7899999999999999997 89999998753
No 458
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=72.92 E-value=2.3 Score=45.48 Aligned_cols=31 Identities=35% Similarity=0.447 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|+|+|.+|.++|..|++. |.+|.|+.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~-G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEK-GAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 599999999999999999999 9999999875
No 459
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=72.79 E-value=2.2 Score=47.49 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|.|||+|..|..+|..|+++ |++|+++|+..
T Consensus 316 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASK-GTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhC-CCEEEEEECCH
Confidence 499999999999999999999 99999999753
No 460
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=72.74 E-value=2.7 Score=46.91 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|-|||+|..|.-.|..+|.+ |+.|+|+|..+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 599999999999999999999 99999999654
No 461
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.65 E-value=3.4 Score=36.67 Aligned_cols=59 Identities=15% Similarity=0.108 Sum_probs=39.5
Q ss_pred HhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCCCCccHHHHHhCCC
Q psy1042 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGI 394 (567)
Q Consensus 319 ~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAGa~~Tp~LLl~SGI 394 (567)
.++...++ +.|++++++ +|++|..++ + . ..|.+ .+| ++.++ .||+|+|.. |.++...|+
T Consensus 60 ~~l~~~~~-~~gv~v~~~-~v~~i~~~~--~-----~-~~v~~-~~g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 60 RRLEAHAR-RYGAEVRPG-VVKGVRDMG--G-----V-FEVET-EEG---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHH-HTTCEEEEC-CCCEEEECS--S-----S-EEEEC-SSC---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHH-HcCCEEEeC-EEEEEEEcC--C-----E-EEEEE-CCC---EEEEC-EEEECCCCC--CCccccCCC
Confidence 34555555 579999999 999998753 2 1 22333 233 68895 799999975 466666665
No 462
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=72.55 E-value=3.1 Score=41.32 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
.-+.|||+|..|.++|..|+.. |. .|.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4699999999999999999998 77 899999754
No 463
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=72.50 E-value=3.2 Score=42.97 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
--++|||.|..|..+|..|... |.+|++.|+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 3699999999999999999988 9999999964
No 464
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=72.44 E-value=3.3 Score=43.99 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..+.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999998764
No 465
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=72.38 E-value=3.7 Score=40.84 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-+.|||+|..|.++|..|+.. |. .|.|+|...
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 489999999999999999997 77 999999754
No 466
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=72.13 E-value=3.6 Score=38.49 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=27.2
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
++|.|+ |..|..+|.+|+++ |++|+++.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHAS-GAKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788887 88999999999998 9999999875
No 467
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=72.10 E-value=3.5 Score=40.17 Aligned_cols=33 Identities=27% Similarity=0.247 Sum_probs=30.0
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
-|+|.|+ |..|..++.+|.++ |++|.++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 4899998 99999999999999 999999998654
No 468
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=71.95 E-value=3.4 Score=41.33 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC--eEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G 150 (567)
--+.|||+|..|.++|..|+.. |. .|.|+|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 3599999999999999999998 77 89999964
No 469
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=71.76 E-value=3.3 Score=43.87 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-|+|||.|..|..+|..|... |.+|+++|+.
T Consensus 276 tV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~ 306 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQ-GARVSVTEID 306 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEEccCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 599999999999999999888 9999999964
No 470
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=71.68 E-value=3.2 Score=40.26 Aligned_cols=31 Identities=13% Similarity=0.297 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G 150 (567)
.++|||+|.+|..+|..|++. |. +|.|+-|-
T Consensus 121 ~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHT-TCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 599999999999999999998 86 79999875
No 471
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=71.64 E-value=3.6 Score=40.21 Aligned_cols=30 Identities=23% Similarity=0.153 Sum_probs=27.1
Q ss_pred EEEECCC---hhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIGAG---SAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVGsG---~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
+||.|++ ..|..+|.+|++. |.+|+++.+.
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~ 65 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLS 65 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCC
Confidence 8889985 7899999999999 9999999875
No 472
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=71.60 E-value=3.4 Score=41.28 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=28.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC--eEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G 150 (567)
-+.|||+|..|.++|..|+.. |. .|.|+|..
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 489999999999999999998 77 89999974
No 473
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=71.49 E-value=3 Score=38.54 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=28.9
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-++|+|+ |..|..++.+|+++ |++|.++.|..
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 4899995 99999999999998 99999999864
No 474
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=71.12 E-value=3.6 Score=39.21 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=27.7
Q ss_pred EEEECC---ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA---GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs---G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|.|+ |..|..+|.+|++. |++|+++.+..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 899997 68999999999999 99999998753
No 475
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=71.11 E-value=4.1 Score=38.82 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=26.3
Q ss_pred EEEECCC-h--hHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIGAG-S--AGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVGsG-~--aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
+||.|++ . .|..+|.+|++. |.+|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEA-GARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCc
Confidence 8888874 4 799999999999 9999999875
No 476
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=71.10 E-value=3.1 Score=41.26 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCC----CeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKK----WKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G----~~VlVLE~G~ 151 (567)
.+.|||+|..|...|..|+++ | .+|.+.++..
T Consensus 24 kI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 499999999999999999998 8 7999998753
No 477
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=71.05 E-value=4.4 Score=38.36 Aligned_cols=32 Identities=13% Similarity=0.463 Sum_probs=27.6
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
++|.|+ |..|..+|.+|+++ |++|+++.+...
T Consensus 25 vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~ 57 (251)
T 3orf_A 25 ILVLGGSGALGAEVVKFFKSK-SWNTISIDFREN 57 (251)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 788886 67899999999999 999999997643
No 478
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=71.01 E-value=3.3 Score=43.06 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
.+.|||.|..|+.+|..|++ |++|+++++.+.
T Consensus 38 kIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~ 69 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ--NHEVVALDIVQA 69 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT--TSEEEEECSCHH
T ss_pred EEEEECcCHHHHHHHHHHHc--CCeEEEEecCHH
Confidence 59999999999999999985 899999997643
No 479
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=70.88 E-value=4.1 Score=38.11 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=27.1
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
++|.|+ |..|..+|.+|++. |.+|+++.+.
T Consensus 10 vlITGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHAT-GARVVAVSRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788887 89999999999998 9999999875
No 480
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=70.83 E-value=3.5 Score=39.54 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=27.2
Q ss_pred EEEEC---CChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 120 FIIIG---AGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 120 vIVVG---sG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
+||.| +|..|..+|.+|++. |++|+++.+.
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~ 42 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFD 42 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECS
T ss_pred EEEECCCCCCchHHHHHHHHHHC-CCEEEEEecC
Confidence 88999 488999999999999 9999999875
No 481
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=70.49 E-value=4.2 Score=40.37 Aligned_cols=31 Identities=23% Similarity=0.437 Sum_probs=28.2
Q ss_pred EEEECCChhHHHHHHHHHhcCCC--eEEEEecCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 151 (567)
+.|||+|..|.++|..|+.. |. .|.|+|...
T Consensus 3 v~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 35 (314)
T 3nep_X 3 VTVIGAGNVGATVAECVARQ-DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCSSEEEEECSST
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCch
Confidence 78999999999999999998 77 899999754
No 482
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=70.46 E-value=4 Score=40.90 Aligned_cols=31 Identities=29% Similarity=0.254 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-+.|||.|..|.+.|..|++. |.+|++.++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECC
Confidence 399999999999999999998 9999998864
No 483
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=70.44 E-value=4 Score=38.91 Aligned_cols=31 Identities=19% Similarity=0.286 Sum_probs=26.5
Q ss_pred EEEECCC---hhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGAG---SAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGsG---~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
+||-|++ ..|..+|.+|+++ |.+|++..+..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCH
Confidence 7888853 5799999999999 99999998753
No 484
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=70.42 E-value=4.5 Score=37.68 Aligned_cols=32 Identities=31% Similarity=0.420 Sum_probs=28.7
Q ss_pred EEEEC-CChhHHHHHHHHHhcCCC--eEEEEecCCC
Q psy1042 120 FIIIG-AGSAGCVLANRLSEIKKW--KVLLLEAGIE 152 (567)
Q Consensus 120 vIVVG-sG~aG~~aA~~Lae~~G~--~VlVLE~G~~ 152 (567)
++|.| +|..|..+|.+|+++ |. +|.++.|...
T Consensus 21 vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 21 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKL 55 (242)
T ss_dssp EEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCC
T ss_pred EEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCC
Confidence 89999 599999999999999 99 9999988643
No 485
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=70.40 E-value=3.5 Score=43.22 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC---eEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW---KVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~---~VlVLE~G~ 151 (567)
--|+|||+|..|.++|..|+++++. .|+|+++-.
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 4599999999999999999998666 799998644
No 486
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=70.19 E-value=4.4 Score=40.73 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=28.1
Q ss_pred EEEECCChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 120 vIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
++|||||.-|..+|..+.+. |++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 89999999999998888777 999999986543
No 487
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=70.19 E-value=3.5 Score=43.14 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|+|+|..|..+|..|++. |.+|.++.+.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDS-GIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEECC
Confidence 389999999999999999997 9999999875
No 488
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=70.08 E-value=3.5 Score=44.94 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCC-eEEEEecCCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 152 (567)
.-|+|||+|..|+.+|..|+.. |. ++.|++....
T Consensus 18 s~VlVVGaGGLGsevak~La~a-GVG~ItlvD~D~V 52 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-GFSHIDLIDLDTI 52 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEEECCBC
T ss_pred CeEEEECcCHHHHHHHHHHHHc-CCCeEEEecCCEE
Confidence 5699999999999999999998 87 7999997654
No 489
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=70.07 E-value=3.7 Score=39.16 Aligned_cols=31 Identities=10% Similarity=0.043 Sum_probs=27.5
Q ss_pred EEEECC---ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA---GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs---G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|.|+ |..|..+|.+|+++ |++|+++.+..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcH
Confidence 788887 58999999999999 99999998753
No 490
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=69.99 E-value=3.3 Score=38.71 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=28.6
Q ss_pred cEEEEC-CChhHHHHHHHHHhcCC-CeEEEEecCC
Q psy1042 119 DFIIIG-AGSAGCVLANRLSEIKK-WKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVG-sG~aG~~aA~~Lae~~G-~~VlVLE~G~ 151 (567)
-++|.| +|..|..+|.+|+++ | ++|.++.|..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADK-QTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcCh
Confidence 489999 699999999999998 8 8999998764
No 491
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=69.97 E-value=3.1 Score=40.43 Aligned_cols=29 Identities=21% Similarity=0.286 Sum_probs=27.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEe
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLE 148 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE 148 (567)
-+.|||.|..|...|..|++. |++|.+++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 489999999999999999998 99999987
No 492
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=69.96 E-value=3.6 Score=42.37 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHHhcCCC-eEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 151 (567)
-++|||+|..|..+|..|... |. +|+++++..
T Consensus 169 ~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~~ 201 (404)
T 1gpj_A 169 TVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRTY 201 (404)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCSEEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 599999999999999999988 98 999998754
No 493
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=69.96 E-value=4.4 Score=39.37 Aligned_cols=32 Identities=22% Similarity=0.513 Sum_probs=29.0
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGIE 152 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~~ 152 (567)
++|.|+ |..|..++.+|+++ |++|.++.+...
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 35 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSS 35 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSS
T ss_pred EEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCC
Confidence 789998 99999999999998 999999987644
No 494
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=69.94 E-value=4.4 Score=40.50 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-+.|||.|..|..+|.+|+.. |.+|++.++..
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~ 183 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGF-NMRILYYSRTR 183 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHhC-CCEEEEECCCc
Confidence 599999999999999999998 99999998753
No 495
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=69.84 E-value=4.7 Score=37.51 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=26.9
Q ss_pred EEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 120 vIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
++|.|+ |..|..+|.+|+++ |++|+++.+..
T Consensus 5 vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~ 36 (242)
T 1uay_A 5 ALVTGGASGLGRAAALALKAR-GYRVVVLDLRR 36 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHH-TCEEEEEESSC
T ss_pred EEEeCCCChHHHHHHHHHHHC-CCEEEEEccCc
Confidence 778875 77899999999999 99999998754
No 496
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.83 E-value=4.3 Score=40.22 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=29.4
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 119 DvIVVGs-G~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
-|+|.|| |..|..++.+|+++ |++|.++.+..
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~ 53 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRP 53 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 4999998 99999999999999 99999998764
No 497
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=69.82 E-value=4.3 Score=44.44 Aligned_cols=56 Identities=14% Similarity=-0.014 Sum_probs=38.7
Q ss_pred hhHHhhHHHHhcCCCeEEecceEEEEEEeCCCCCCCCccEEEEEEEEeCCEEEEEEcCcEEEEcCC
Q psy1042 316 TNGAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAG 381 (567)
Q Consensus 316 ~~~~~L~~a~~~~~gv~I~~~t~V~~I~~d~~~~~~~~~rv~GV~~~~~g~~~~v~A~k~VVLAAG 381 (567)
.+...|.++++ ..|.+|++++.|++|+.+++.+ +|+||.. .+|+ +++|+ .||.++.
T Consensus 379 ~L~qaL~r~~~-~~Gg~i~l~~~V~~I~~~~~~g-----~v~gV~~-~~Ge--~i~A~-~VVs~~~ 434 (650)
T 1vg0_A 379 ELPQCFCRMCA-VFGGIYCLRHSVQCLVVDKESR-----KCKAVID-QFGQ--RIISK-HFIIEDS 434 (650)
T ss_dssp HHHHHHHHHHH-HTTCEEESSCCEEEEEEETTTC-----CEEEEEE-TTSC--EEECS-EEEEEGG
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEeeEEEEeCCCC-----eEEEEEe-CCCC--EEEcC-EEEEChh
Confidence 33334545555 6899999999999999874325 7999883 3343 57895 5777554
No 498
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=69.74 E-value=3.9 Score=41.26 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=28.8
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
--|+|+|.|..|..+|..|.+. |.+|++.|..
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVvvsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLLVADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 3599999999999999999998 9999998853
No 499
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=69.66 E-value=3.7 Score=43.30 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHhcCCCeEEEEecCC
Q psy1042 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (567)
Q Consensus 118 yDvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 151 (567)
..+.|||.|..|...|..|+++ |++|.+.++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 3699999999999999999998 99999998753
No 500
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=69.59 E-value=3.2 Score=43.62 Aligned_cols=32 Identities=13% Similarity=0.230 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHHhcCCCeEEEEecC
Q psy1042 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (567)
Q Consensus 119 DvIVVGsG~aG~~aA~~Lae~~G~~VlVLE~G 150 (567)
-++|||+|..|..+|..|++.+|.+|.|+.|.
T Consensus 25 ~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 25 NVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred EEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 59999999999999999998757899999875
Done!