RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1042
(567 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 220 bits (562), Expect = 5e-67
Identities = 96/386 (24%), Positives = 153/386 (39%), Gaps = 39/386 (10%)
Query: 111 EQDDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG---IEEPFFADVPGLAPLIS 167
+ T+D+II G G G +A +L+E K KVL++E G + + P I
Sbjct: 18 SKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIF 77
Query: 168 RSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-G 226
+ +D NY+T+P + N GK +GGS+ IN + R + D WE + G
Sbjct: 78 GTTVDQNYLTVPLIN------NRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFG 131
Query: 227 NEGWGYDEVLEYFKKSEDNEDKEI------YHKNPEYHGKGGYQTVEWLPYADKNLPVLI 280
EGW +D + EY KK+E + N HG G P++
Sbjct: 132 MEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMK 191
Query: 281 KAWKEKGYPERDLNAENQIG-----VMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILT 335
+ + G M + + R+ A++ P +R NL ILT
Sbjct: 192 ALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNY-QRSNLEILT 250
Query: 336 EAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLR-RARAKKEVISSAGAINSPKILMLSGI 394
V +++ +T + + A V F K + AK EV+ +AG+ SP IL SGI
Sbjct: 251 GQMVGKVLFKQTASGPQ---AVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307
Query: 395 GPKDHLTSLNIKTLVDLK--VGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKES 452
G K L N+ L+DL + + L G V+ D K + +
Sbjct: 308 GLKSVLDQANVTQLLDLPVGICSMMSREL---GGVV-------DATAKVYGTQGLRVIDG 357
Query: 453 RCGPLASTGPLQCGVFAKT-KLADSL 477
P + + + K+AD++
Sbjct: 358 SIPPTQVSSHVMTIFYGMALKVADAI 383
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 210 bits (536), Expect = 2e-63
Identities = 88/326 (26%), Positives = 132/326 (40%), Gaps = 25/326 (7%)
Query: 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP---FFADVPGLAPLISRSN 170
T D+II G G G A RL+E VL++E+G E + I S+
Sbjct: 14 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSS 73
Query: 171 IDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGN-EG 229
+D Y T+ A N G +GGS+ +N + R + D WE + EG
Sbjct: 74 VDHAYETVEL-----ATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEG 128
Query: 230 WGYDEVLEYFKKSE------DNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVL---I 280
W +D V Y ++E + ++ N HG G D P++ +
Sbjct: 129 WNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIVKALM 188
Query: 281 KAWKEKGYPE-RDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHV 339
A +++G P +D + GV T + S +R NL +LT +V
Sbjct: 189 SAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYV 248
Query: 340 TRIICDKTPNKHKKLVAKSVEFFYKK-KLRRARAKKEVISSAGAINSPKILMLSGIGPKD 398
+++ + + A VEF K AK EV+ +AG+ SP IL SGIG K
Sbjct: 249 GKVLLSQNGTTPR---AVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKS 305
Query: 399 HLTSLNIKTLVDLKVG--HNLQDHLT 422
L L I T+VDL VG + +
Sbjct: 306 ILEPLGIDTVVDLPVGLCSMMPKEMG 331
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 189 bits (481), Expect = 8e-56
Identities = 75/330 (22%), Positives = 129/330 (39%), Gaps = 33/330 (10%)
Query: 93 PEQSNEGYDKDHKNNNREEQDDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152
S+ + + + + + ++D++I+G G++GC LA LSE K+KVL+LE G
Sbjct: 2 ATTSDHDFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSL 59
Query: 153 EPFFADVPGLAPLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYA 212
+ +V + + + T E RG+V+GG+S IN +YA
Sbjct: 60 PTAYPNVLTADGFVYNLQQEDDGKTPVERFVS----EDGIDNVRGRVLGGTSIINAGVYA 115
Query: 213 RGNAEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYA 272
R N Y W D V + ++ ED + ++ +
Sbjct: 116 RANTSIYSASGVD----WDMDLVNQTYEWVEDTIVYKPNSQSWQSVT------------- 158
Query: 273 DKNLPVLIKAWKEKGYPERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLT 332
A+ E G + + + +T + + + NL
Sbjct: 159 -------KTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLN-KGNSNNLR 210
Query: 333 ILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLS 392
+ A V +II P + R+K EVI SAG I +P++L+LS
Sbjct: 211 VGVHASVEKIIFSNAPG-LTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLS 269
Query: 393 GIGPKDHLTSLNIKTLVDLK-VGHNLQDHL 421
G+GP+ +L+SLNI ++ VG L +
Sbjct: 270 GVGPESYLSSLNIPVVLSHPYVGQCLVGKV 299
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 182 bits (463), Expect = 6e-53
Identities = 34/342 (9%), Positives = 85/342 (24%), Gaps = 34/342 (9%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWN 174
D+ +D +I+G+G GC A L +KV + + G + +
Sbjct: 2 DIKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDK 60
Query: 175 YMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDE--------WEAMG 226
++ + + + + N E +G
Sbjct: 61 FVNVIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVG 120
Query: 227 NEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTV---EWLPYADKNLPVLIKAW 283
+ F + + + + Y ++
Sbjct: 121 GMSTHWTCATPRFDREQRPL-----LVKDDADADDAEWDRLYTKAESYFQTGTDQFKESI 175
Query: 284 KEKGYPER-DLNAENQIGV----MHLQTTTRHGERLSTNGAFIRPI-----RKKRKNLTI 333
+ + + Q + + S+ + +
Sbjct: 176 RHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNL 235
Query: 334 LTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRAR-AKKEVISSAGAINSPKILMLS 392
R++ + ++ +S+ R + +AGA+++ ++L+ S
Sbjct: 236 FPAVACERVVRNALNSE-----IESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNS 290
Query: 393 GIGPKDHLTSLNIKTLVDLKVGHNL-QDHLTSDGIVIAFPKT 433
G G N L+ H + D + V +
Sbjct: 291 GFGQLGRPNPTNPPELLPSLGSHRMGFDEKEDNCCVNTDSRV 332
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 167 bits (424), Expect = 2e-47
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 41/333 (12%)
Query: 114 DDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVP------------- 160
D ++IG+G G V A RL++ ++E G
Sbjct: 4 DGDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRS 62
Query: 161 ------GLAPLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARG 214
P+ + N + +G+ +GG S +N +
Sbjct: 63 MWLADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTP 122
Query: 215 NAEDYDEWEAMGNEGWGYDEVLEYFKKSED---NEDKEIYHKNPEYHGKGGYQTVEWLPY 271
++E + Y++ + + G +T + +
Sbjct: 123 KRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEWYKFARTGRKTAQRSGF 182
Query: 272 ADKNLPVLIKAWKEKGYPERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNL 331
+P + + + G+ + + S + ++ L
Sbjct: 183 TTAFVPNVYDFE---YMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAA-ATGKL 238
Query: 332 TILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILML 391
TI T VT++ + + ++ + V +AG++ + K+L+
Sbjct: 239 TITTLHRVTKVAPA--TGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVS 296
Query: 392 SGIGPKDHLTSLNIKTLVDL--KVGHNLQDHLT 422
L +L +VG L
Sbjct: 297 MK----------AQGHLPNLSSQVGEGWGVLLN 319
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 160 bits (406), Expect = 5e-45
Identities = 64/330 (19%), Positives = 103/330 (31%), Gaps = 40/330 (12%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNI----- 171
+D+II+GAG G + A+RLSE KVLLLE G +AP + S +
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 172 ---DWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNE 228
+ T P G ++GG +++N +Y N D+
Sbjct: 61 PGLFESLFTDSNPFWW----CKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW--- 113
Query: 229 GWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGY 288
+ Y K G + + L+K
Sbjct: 114 PSSWTNHAPYTSKLSSR-----LPSTDHPSTDGQRYLEQSFNVVSQ----LLKGQGYNQA 164
Query: 289 PERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTRIICDKTP 348
D + +G+R +++ R N T T V+ ++ +
Sbjct: 165 TINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTAL-ARPNFTFKTNVMVSNVVRN--- 220
Query: 349 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIK-- 406
V + K VI SAGA + +IL SGIGP D + ++
Sbjct: 221 GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPT 280
Query: 407 ---------TLVDLKVGHNLQDHLTSDGIV 427
++L VG +V
Sbjct: 281 AAAALPPQNQWINLPVGMTTIGSSPQSAVV 310
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 154 bits (389), Expect = 2e-42
Identities = 48/339 (14%), Positives = 89/339 (26%), Gaps = 60/339 (17%)
Query: 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG----IEEPFFADVPGLAPLISRSNIDWN 174
++IG G V A RL E + L+LE G P G+ RS+ N
Sbjct: 4 PAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKN 62
Query: 175 YMTMP----------------EPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAED 218
P + G+ +GG S +N +
Sbjct: 63 RTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSY 122
Query: 219 YDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPV 278
++E + YF ++ K V
Sbjct: 123 FEEILPR---VDSSEMYDRYFPRANS-----------MLRVNHIDTKWFEDTEWYKFARV 168
Query: 279 LIKAWKEKGYPERDLNAENQIG--------------VMHLQTTTRHGERLSTNGAFIRPI 324
+ + G + G + + + S + ++
Sbjct: 169 SREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAA 228
Query: 325 RKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAIN 384
+TI T V I + L + + K + + + + AG++
Sbjct: 229 L-GTGKVTIQTLHQVKTIRQT--KDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLG 285
Query: 385 SPKILMLSGIGPKDHLTSLNIKTLVDLKVGHNLQDHLTS 423
S ++L+ + L +LN +VG L
Sbjct: 286 STELLVRARD--TGTLPNLNS------EVGAGWGCVLGK 316
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 196
Score = 72.9 bits (178), Expect = 2e-15
Identities = 24/157 (15%), Positives = 41/157 (26%), Gaps = 27/157 (17%)
Query: 416 NLQDHL------------TSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPL 463
N+QD G + F + A + ++ A +
Sbjct: 1 NMQDQTTTTVSSRASSAGAGQGQAVFFANFT--ETFGDYAPQARDLLNTKLDQWAEE-TV 57
Query: 464 QCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLK 523
G F + + W+ + I L
Sbjct: 58 ARGGFHNV--TALKVQYENYRN--------WL--LDEDVAFAELFMDTEGKINFDLWDLI 105
Query: 524 PKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVA 560
P +RG + + ++DP PKFF + DL A
Sbjct: 106 PFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAA 142
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger
[TaxId: 5061]}
Length = 196
Score = 70.9 bits (173), Expect = 9e-15
Identities = 27/157 (17%), Positives = 41/157 (26%), Gaps = 27/157 (17%)
Query: 416 NLQDHL------------TSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPL 463
NLQD G F + A E ++ A +
Sbjct: 1 NLQDQTTATVRSRITSAGAGQGQAAWFATFN--ETFGDYSEKAHELLNTKLEQWAE-EAV 57
Query: 464 QCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLK 523
G F T L + + V S + + L
Sbjct: 58 ARGGFHNT--TALLIQYENYRDWIV-------NHNVAYSELFLDTA---GVASFDVWDLL 105
Query: 524 PKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVA 560
P +RGY+ + DP P++F + DL A
Sbjct: 106 PFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAA 142
>d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome
cellobiose dehydrogenase (CDH), substrate-binding domain
{Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
Length = 181
Score = 57.1 bits (137), Expect = 3e-10
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 18/149 (12%)
Query: 416 NLQDHLTSDGIV----IAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKT 471
N QD+ + + + I + D + +DA +Y ++ G A P + +
Sbjct: 1 NAQDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASP-KLNFWRAY 59
Query: 472 KLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQ 531
+D Q P + + P NAS + Y +SRG I
Sbjct: 60 SGSDGFT-RYAQGTVRPGAASVNSSLPYNASQI-FTITVYL--------STGIQSRGRIG 109
Query: 532 LNATDPLWGPPLIFPKFFTKKPDLDVFVA 560
++A ++ P + D V +
Sbjct: 110 IDAALR---GTVLTPPWLVNPVDKTVLLQ 135
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 56.4 bits (134), Expect = 3e-09
Identities = 32/300 (10%), Positives = 67/300 (22%), Gaps = 44/300 (14%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA--------------GIEEPFFADVP 160
D +D I++G G C+L+ LS KVL ++ + E F +
Sbjct: 3 DTDYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI 61
Query: 161 GLAPLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKV---MGGSSTINYMIYARGNAE 217
S+ D ++ P A V + ++ +G
Sbjct: 62 SKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY 121
Query: 218 DYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKN-- 275
E + K + H K
Sbjct: 122 KVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGL 181
Query: 276 ------------LPVLIKAWKEKGYPERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRP 323
+ ++ + + + + G +
Sbjct: 182 GNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQG 241
Query: 324 IRK--KRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAG 381
+ T + + + ++ K K + + K F VI+
Sbjct: 242 FARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPL----------VIADPT 291
>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus
dulcis) [TaxId: 3755]}
Length = 170
Score = 52.4 bits (125), Expect = 1e-08
Identities = 12/102 (11%), Positives = 27/102 (26%), Gaps = 12/102 (11%)
Query: 459 STGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVR 518
+ + S + F P ++ P
Sbjct: 19 EPTIVTVLGISNDFYQCSF--SSLPFTTPPFGFFP----------SSSYPLPNSTFAHFA 66
Query: 519 PILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVA 560
+ P S G + L ++ + P + +++ DL V+
Sbjct: 67 SKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVS 108
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 50.8 bits (120), Expect = 1e-07
Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 8/140 (5%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNY 175
M +D I+IG G +G + A +E + VLLL+ G + G IS
Sbjct: 1 MHYDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKG-------NKLGRKLAISGGGRCNVT 52
Query: 176 MTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEV 235
+P K P + + + I G ++ M V
Sbjct: 53 NRLPLDEIVKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSV 112
Query: 236 LEYFKKSEDNEDKEIYHKNP 255
++ + +I P
Sbjct: 113 VDALLTRLKDLGVKIRTNTP 132
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 49.1 bits (115), Expect = 7e-07
Identities = 34/356 (9%), Positives = 83/356 (23%), Gaps = 44/356 (12%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG----------IEEPFFADV---PG 161
D +D I++G G C+L+ +S KVL ++
Sbjct: 4 DEEYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 62
Query: 162 LAPLISRSNIDW------NYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGN 215
P DW ++ + KV+ GS +
Sbjct: 63 GPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 122
Query: 216 AEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKN 275
+ + + + + ++ + ++ + + V ++
Sbjct: 123 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQD 182
Query: 276 LPVLIKAWKEKGYPERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILT 335
+ Y D + + ++ ++ P+ +
Sbjct: 183 VIDFTGHA-LALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFA 241
Query: 336 EAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 395
+ + V S +++
Sbjct: 242 RLSAIYGGTYMLNKPVDDI------------IMENGKVVGVKSEGEVARCKQLICDPSYV 289
Query: 396 PKDHLTSLNIKTLVDLKVGHNLQDHLTSDGIVIAFPKTATD--RMYKKKVSDAFEY 449
P ++ V ++ H F T D +YK+ AF++
Sbjct: 290 PDRVPIDDGSESQVFCSCSYDATTH---------FETTCNDIKDIYKRMAGSAFDF 336
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 47.7 bits (112), Expect = 2e-06
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 8/118 (6%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWN 174
T D +++G+G AG A ++ KV+L+E V G ++ ++
Sbjct: 14 HDTVDVVVVGSGGAGFSAAISATD-SGAKVILIEKE-------PVIGGNAKLAAGGMNAA 65
Query: 175 YMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGY 232
+ + P + + + + + D AMG +
Sbjct: 66 WTDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTDV 123
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 46.4 bits (109), Expect = 4e-06
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 84 YDNTGHKKRPEQSNEGYDKDHKNNNREEQDDDMTFDFIIIGAGSAGCVLANRLSEIKKWK 143
YD P + + ++ + D +++GAGSAG A +S+ +
Sbjct: 1 YDLNAFTFDPIKESI-VSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQ 59
Query: 144 VLLLEAG 150
V ++E
Sbjct: 60 VAIIEQS 66
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 44.1 bits (103), Expect = 1e-05
Identities = 26/201 (12%), Positives = 56/201 (27%), Gaps = 23/201 (11%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNY 175
+ + +++GAG G V A R +++ + KV ++E G ++ G+ +
Sbjct: 2 IETETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG-------NLGGVCLNVGCIPSKALI 53
Query: 176 MTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW----EAMGNEGWG 231
K + + + + +G
Sbjct: 54 SASHRYEQAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEA 113
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNPEY-HGKGGYQTVEWLPYADK-NLPVLIKAWKEKGYP 289
Y + + + KN G + V P D+ L + +G
Sbjct: 114 YFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELVGRRPNTDELGLEQIGIKMTNRGLI 173
Query: 290 ERDLNAENQIGVMHLQTTTRH 310
E D +T+ +
Sbjct: 174 EVD---------QQCRTSVPN 185
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 43.7 bits (102), Expect = 2e-05
Identities = 19/145 (13%), Positives = 40/145 (27%), Gaps = 13/145 (8%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNY 175
++D+++IG GS G A R +E+ + ++E+ + G + +
Sbjct: 2 ASYDYLVIGGGSGGLASARRAAELGA-RAAVVESHK-------LGGTCVNVGCVPKKVMW 53
Query: 176 MTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEV 235
T + GK + R N + E+
Sbjct: 54 NTAVHSEFMHDHADYGFPSCEGKFN-----WRVIKEKRDAYVSRLNAIYQNNLTKSHIEI 108
Query: 236 LEYFKKSEDNEDKEIYHKNPEYHGK 260
+ + I +Y
Sbjct: 109 IRGHAAFTSDPKPTIEVSGKKYTAP 133
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 43.1 bits (100), Expect = 3e-05
Identities = 22/154 (14%), Positives = 36/154 (23%), Gaps = 2/154 (1%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMT 177
FD I+IGAG G V A + ++ K L+E + G L +
Sbjct: 4 FDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKY-KGKEGKTALGGTCLNVGCIPSKALLD 61
Query: 178 MPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLE 237
+ G+V T+ + G E
Sbjct: 62 SSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHG 121
Query: 238 YFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPY 271
+ E + + P
Sbjct: 122 KLLAGKKVEVTAADGSSQVLDTENVILASGSKPV 155
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 43.6 bits (102), Expect = 3e-05
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149
+D+II+G+G G V AN L + KVL++E
Sbjct: 2 YDYIIVGSGLFGAVCANELKK-LNKKVLVIEK 32
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 43.1 bits (100), Expect = 5e-05
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 5/136 (3%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA---GIEEPFFADVPGLAPLISRSNIDWN 174
+D I+IG GS G A R + KV L+E G VP + S D
Sbjct: 2 YDLIVIGGGSGGMAAARRAARHNA-KVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDIL 60
Query: 175 YMTMPEPHACKARPNGRCYWAR-GKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYD 233
+ K N R K + + I ++ + Y+ + +E
Sbjct: 61 ENSRHYGFDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILI 120
Query: 234 EVLEYFKKSEDNEDKE 249
+ + ++ E
Sbjct: 121 KGTKDNNNKDNGPLNE 136
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 42.8 bits (99), Expect = 6e-05
Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 15/165 (9%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA--------------GIEEPFFADVPGLA 163
FD I++GAGS G +L++ + K LL++A I + +
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYV 62
Query: 164 PLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWE 223
PL RS W + H + + +G+ + T+ + + E
Sbjct: 63 PLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDE 122
Query: 224 AMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEW 268
++ + Y + +
Sbjct: 123 INKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEARGAKV 167
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 42.4 bits (98), Expect = 8e-05
Identities = 18/113 (15%), Positives = 29/113 (25%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMT 177
D +I GAG G A L + KV LLE+ E + P + +
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGP 61
Query: 178 MPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGW 230
A + V + + E + +
Sbjct: 62 ALAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAV 114
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/211 (13%), Positives = 61/211 (28%), Gaps = 16/211 (7%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
FD ++IGAGS G A + + K +V +++ + S + +
Sbjct: 3 IFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVH----------GPPFFSALGGTCV 52
Query: 177 TMPEPHACKARPNGRCYWARGKVMG-GSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEV 235
+ + + G G + A + EA+ N YDE+
Sbjct: 53 NVGCVPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEM 112
Query: 236 LEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERDLNA 295
+ E + + + + +L+ + P
Sbjct: 113 FRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNGRSPR 172
Query: 296 ENQIGVMHLQTTTRHG-----ERLSTNGAFI 321
+ + + ++G E TN + I
Sbjct: 173 TKDLQLQNAGVMIKNGGVQVDEYSRTNVSNI 203
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 41.9 bits (97), Expect = 1e-04
Identities = 12/84 (14%), Positives = 27/84 (32%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
+D ++IGAGS G + + K +V +++ ++ + M
Sbjct: 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLM 62
Query: 177 TMPEPHACKARPNGRCYWARGKVM 200
+ R + W +
Sbjct: 63 VTGANYMDTIRESAGFGWELDRES 86
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 41.5 bits (96), Expect = 1e-04
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 92 RPEQSNEGYDKDHKNNNREEQDDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
R ++ E D N +E +D +D I IG G+AG + L + + L+++
Sbjct: 18 RIDEILEAPDGGEVIYNVDE-NDPREYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRW 74
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 40.6 bits (94), Expect = 2e-04
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
+ D +IIG G AG V A + ++ + +E + G +
Sbjct: 5 SHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKR------GKLGGTCLNVGCIPSKALLN 57
Query: 177 TMPEPHACKARPNGR 191
H R
Sbjct: 58 NSHLFHQMHTEAQKR 72
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 40.5 bits (93), Expect = 3e-04
Identities = 15/143 (10%), Positives = 44/143 (30%), Gaps = 8/143 (5%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
++ ++IG G G +A L++ + L E+G + G + + +
Sbjct: 4 HYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESG-------TMGGRTTSAAAGMLGAHAE 55
Query: 177 TMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVL 236
+ + + + + + G E + D++
Sbjct: 56 CEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLD 115
Query: 237 EYFKKSEDNEDKEIYHKNPEYHG 259
S++ ++ + + + G
Sbjct: 116 SVSWYSKEEVLEKEPYASGDIFG 138
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 40.7 bits (94), Expect = 3e-04
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
+ + D +IIG+G+AG LA RL++ + +V++L G
Sbjct: 5 EHSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKG 38
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 40.3 bits (93), Expect = 3e-04
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 9/93 (9%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
+ IIIGAG+AG A +L++ V + + G G L+S N+
Sbjct: 4 YSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNG-------KKIGRKILMS-GGGFCNFT 54
Query: 177 TMPEPHACKARPNGRCYWARGKVMGGSSTINYM 209
+ A N + I+ +
Sbjct: 55 NLEVTPAHYLSQNPHFVKSALARYTNWDFISLV 87
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 39.9 bits (92), Expect = 4e-04
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
+D+I IG GS G NR + + K L+EA
Sbjct: 3 YDYIAIGGGSGGIASINRAAMYGQ-KCALIEAK 34
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 40.1 bits (92), Expect = 5e-04
Identities = 40/296 (13%), Positives = 75/296 (25%), Gaps = 39/296 (13%)
Query: 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG---------IEEP----------FFADV 159
+ ++G G +G +A+ L + +LLE+ F
Sbjct: 2 NVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDRE 60
Query: 160 PGLAPLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDY 219
P L + N++ R R + + I G
Sbjct: 61 PATRALAAALNLEGRIRAADPAAKR--RYVYTRGRLRSVPASPPAFLASDILPLGARLRV 118
Query: 220 DEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVL 279
G DE L F + + G + P+L
Sbjct: 119 AGELFSRRAPEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQL--SVAATFPML 176
Query: 280 IKAWKEKG----YPERDLNAENQIGVMHLQTTTRHGERLSTNGAFIRPIRKKRKNL--TI 333
+K +E R A+ Q + G + +G I +L
Sbjct: 177 VKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAA 236
Query: 334 LTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKIL 389
A V + + + + + + V+ +A A + K+L
Sbjct: 237 HVGARVEGLAREDGGWR--------LIIEEHGRRAELSVAQ-VVLAAPAHATAKLL 283
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 40.0 bits (92), Expect = 5e-04
Identities = 23/205 (11%), Positives = 47/205 (22%), Gaps = 14/205 (6%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPE 180
+++G+G G A L+ K + V +L + P A + +N
Sbjct: 10 VVLGSGVIGLSSALILAR-KGYSVHILAR--DLPEDVSSQTFASPWAGANWTPFMTLTDG 66
Query: 181 PHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYFK 240
P K + W + + E W D Y
Sbjct: 67 PRQAKWEESTFKKWVE-------LVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRP 119
Query: 241 KSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERDLNAENQIG 300
+ + ++L + L + + A+
Sbjct: 120 LPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQAFDGAD---- 175
Query: 301 VMHLQTTTRHGERLSTNGAFIRPIR 325
++ T + R
Sbjct: 176 LVVNATGLGAKSIAGIDDQARGGPR 200
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 40.2 bits (93), Expect = 5e-04
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 101 DKDHKNNNREEQDDDMTFDFIIIGAGSAGCVLANRLSEIKK-----WKVLLLEAGIE 152
D+D + + D +I+GAG AG A RL ++ +V L+E
Sbjct: 16 DQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 40.0 bits (92), Expect = 6e-04
Identities = 29/197 (14%), Positives = 51/197 (25%), Gaps = 18/197 (9%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWN 174
T D +IIG+G AG A + KV+LLE +PG ++
Sbjct: 21 KETTDVVIIGSGGAGLAAAVSARD-AGAKVILLEKE-------PIPGGN---TKLAAGGM 69
Query: 175 YMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDE 234
+P A + + + GG + + + + + W
Sbjct: 70 NAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDPELV------KVLANNSSDSIDWLTSM 123
Query: 235 VLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERDLN 294
+ P G + L I+ D
Sbjct: 124 GADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED-A 182
Query: 295 AENQIGVMHLQTTTRHG 311
+ GV+ T +
Sbjct: 183 SGKVTGVLVKGEYTGYY 199
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 39.7 bits (91), Expect = 6e-04
Identities = 22/152 (14%), Positives = 37/152 (24%), Gaps = 10/152 (6%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
T +IIGAG G LA+ L + +L+ G + + +
Sbjct: 1 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQG--------PLNMPGGSTSHAPGLVFQ 52
Query: 177 TMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVL 236
T P G S + A + +
Sbjct: 53 TNPSKTMASFAKYTVEKLLSLTEDGVS--CFNQVGGLEVATTETRLADLKRKLGYAAAWG 110
Query: 237 EYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEW 268
+ E +E+Y + GG
Sbjct: 111 IEGRLLSPAECQELYPLLDGENILGGLHVPSD 142
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 39.3 bits (90), Expect = 7e-04
Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFA-DVPGLAPLISRSNIDWNYM 176
FD IIIG GS G A ++ KV++L+ P G +
Sbjct: 4 FDLIIIGGGSGGLAAAKEAAK-FDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKLMH 62
Query: 177 TMPEPHACKARPNGRCYWARGKV 199
+ V
Sbjct: 63 QAALLGQALKDSRNYGWKLEDTV 85
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 39.1 bits (90), Expect = 7e-04
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
D +D +++G G G A ++ KV ++E
Sbjct: 4 DAEYDVVVLGGGPGGYSAAFAAADEGL-KVAIVERY 38
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 38.8 bits (89), Expect = 9e-04
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
+ +IIG G G V A R ++ +L+E
Sbjct: 4 IQTTLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ 37
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 38.4 bits (88), Expect = 0.001
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 98 EGYDKDHKNNNREEQDDDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
+G+D+D K T +++GAGSAG + + V+L++
Sbjct: 1 DGWDQD-KIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKK-AGANVILVDKA 51
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 38.3 bits (88), Expect = 0.001
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
D +IIG G G V A + ++ +K +E
Sbjct: 4 NDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKR 35
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 38.2 bits (87), Expect = 0.002
Identities = 12/117 (10%), Positives = 26/117 (22%), Gaps = 6/117 (5%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYM 176
T ++G +G A L + V + E P G ++ + +
Sbjct: 4 TDRIAVVGGSISGLTAALMLRD-AGVDVDVYER---SPQPLSGFGTGIVVQPELVHYLLE 59
Query: 177 --TMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWG 231
+ + + G+ +G E
Sbjct: 60 QGVELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTS 116
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 38.0 bits (87), Expect = 0.002
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLA 163
M IIGAG +G +L L + ++LE + +
Sbjct: 1 MKTQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLGRIRAGV 47
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 37.0 bits (84), Expect = 0.002
Identities = 21/160 (13%), Positives = 41/160 (25%), Gaps = 4/160 (2%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMT 177
+D +I+G+G AG A + + L+ V +
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARKGI-RTGLMGERFGGQILDTVDIENYISVPKTEGQKLAG 60
Query: 178 MPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLE 237
+ H + + + K++ + + + G
Sbjct: 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKLPNTNW 120
Query: 238 YFKKSEDNEDKEIYHK-NPEYHGKGGY--QTVEWLPYADK 274
E N EI E + KG + +PY
Sbjct: 121 LEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQI 160
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 38.0 bits (86), Expect = 0.002
Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 13/162 (8%)
Query: 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSN---IDWNY 175
I++GAG +G A RLSE +L+LEA D G + ++
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEA-------TDHIGGRMHKTNFAGINVELGA 54
Query: 176 MTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEV 235
+ + K P + K+ + + Y N D + E+
Sbjct: 55 NWVEGVNGGKMNPIWPIVNSTLKLR---NFRSDFDYLAQNVYKEDGGVYDEDYVQKRIEL 111
Query: 236 LEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLP 277
+ ++ + ++ + Q + P
Sbjct: 112 ADSVEEMGEKLSATLHASGRDDMSILAMQRLNEHQPNGPATP 153
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 37.9 bits (87), Expect = 0.002
Identities = 26/247 (10%), Positives = 61/247 (24%), Gaps = 28/247 (11%)
Query: 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
+I+GAG +G V+ +L+E K +V +++ + G + S +
Sbjct: 5 ILIVGAGFSGAVIGRQLAE-KGHQVHIIDQR------DHIGGNSYDARDSETNVMVHVYG 57
Query: 180 EPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYF 239
Y + M + + + ++F
Sbjct: 58 PHIFHTDNETVWNYVNKHAEMMPYVNRVKATVNGQ----------VFSLPINLHTINQFF 107
Query: 240 KKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERDLNAENQI 299
K+ ++ QT E + +K + +
Sbjct: 108 SKTCSPDEARALIAEKGDSTIADPQTFEEEALRFIGKELYEAFFKGYTIKQWGMQPSELP 167
Query: 300 GVMHLQTTTRHGERLSTNGAFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSV 359
+ + R + + + K + N V
Sbjct: 168 ASILKRLPVRFNYDDNYFNHKFQGMPKCGYT-----------QMIKSILNHENIKVDLQR 216
Query: 360 EFFYKKK 366
EF +++
Sbjct: 217 EFIVEER 223
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 37.5 bits (86), Expect = 0.002
Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 7/122 (5%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAG--IEEPFFADVPGLAPLISRSNID-WNYMT 177
++IGAG G A + E + VL + F P ++ +
Sbjct: 4 VVIGAGVIGLSTALCIHE-RYHSVLQPLDVKVYADRFT---PFTTTDVAAGLWQPYTSEP 59
Query: 178 MPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLE 237
A + + ++ + + + G+ ++
Sbjct: 60 SNPQEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDPYWKDMVLGFRKLTP 119
Query: 238 YF 239
Sbjct: 120 RE 121
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 37.8 bits (86), Expect = 0.003
Identities = 29/166 (17%), Positives = 47/166 (28%), Gaps = 12/166 (7%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPE 180
+I+GAG AG A L+ +V +LEA + PG R+ Y +
Sbjct: 34 VIVGAGMAGLSAAYVLAG-AGHQVTVLEAS-------ERPGGRVRTYRNEEAGWYANLGP 85
Query: 181 PHACKARPNGRCYWARGKVMG---GSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLE 237
+ R Y + + N + + + E + Y
Sbjct: 86 MRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDP-GLLKYPVKPS 144
Query: 238 YFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAW 283
KS +E K E + + LIK
Sbjct: 145 EAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTKEYLIKEG 190
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 37.4 bits (85), Expect = 0.003
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149
D +++G G +G A L + V++LEA
Sbjct: 1 DVVVVGGGISGMAAAKLLHD-SGLNVVVLEA 30
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 35.5 bits (80), Expect = 0.009
Identities = 17/140 (12%), Positives = 36/140 (25%), Gaps = 13/140 (9%)
Query: 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEEPFF------------ADVPGLAPL 165
+ +I+G G AG +A L + + L+ P A L
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLR 64
Query: 166 ISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM 225
+ N + + + + R + + A
Sbjct: 65 TPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPLIPNCELASAA 124
Query: 226 GNEGWGYDEVLEYFKKSEDN 245
G + + E+ + S+
Sbjct: 125 GLQVDNGIVINEHMQTSDPL 144
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 36.3 bits (82), Expect = 0.009
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
D ++IG G AG A + K ++L
Sbjct: 4 QYCDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLI 37
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 36.1 bits (82), Expect = 0.011
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 110 EEQDDDMTFDFIIIGAGSAGCVLANRLSEIKKW---KVLLLEAG 150
E + + D +IIG G +GC A + K KV L+E
Sbjct: 14 EVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 57
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 36.0 bits (81), Expect = 0.011
Identities = 34/341 (9%), Positives = 75/341 (21%), Gaps = 35/341 (10%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAG---------IEEP----------FFADVPG 161
+IGAG +G A +L V + EA + +
Sbjct: 5 AVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGD 63
Query: 162 LAPLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDE 221
+ LI + + NG + + ++
Sbjct: 64 VTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPI 123
Query: 222 WEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIK 281
D + + KE+ + G + P L
Sbjct: 124 LWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWN 183
Query: 282 AWKEKGYPERDLNAENQIG-----------VMHLQTTTRHGERLSTNGAFIRPIRKKRKN 330
K G + + L I K +
Sbjct: 184 LEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLRE 243
Query: 331 LTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILM 390
+ + V + + + + + S+ K + + + + K +
Sbjct: 244 DELRLNSRVLEL--SCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMK 301
Query: 391 LSGIGPKDHLTSLNIKTLVDL-KVGHNLQDHLTS-DGIVIA 429
++ G L + + V + + G+ A
Sbjct: 302 IAKRGNPFLLNFIPEVYGHNYDSVLDAIDKMEKNLPGLFYA 342
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 35.7 bits (80), Expect = 0.015
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150
IIIG+G +G A +L V LLEA
Sbjct: 9 IIIGSGVSGLAAARQLQS-FGMDVTLLEAR 37
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 35.0 bits (79), Expect = 0.016
Identities = 17/155 (10%), Positives = 40/155 (25%), Gaps = 13/155 (8%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSE--IKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDW 173
+T +I+G G AG A + + +V +++ + G A L
Sbjct: 1 VT-RIVILGGGPAGYEAALVAATSHPETTQVTVIDCD-------GIGGAAVLDDCVPSKT 52
Query: 174 NYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYD 233
+ + P+ + ++ + +
Sbjct: 53 FIASTGLRTELRRAPHLGFHI---DFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGV 109
Query: 234 EVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEW 268
+V+ + D+ H+ G E
Sbjct: 110 QVIAGRGELIDSTPGLARHRIKATAADGSTSEHEA 144
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 35.1 bits (79), Expect = 0.019
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKK----WKVLLLEAGIEEPFFADVPGLAP 164
+ D +I+GAG AG + A LSE + KV +++ + + GL
Sbjct: 5 ESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQC 58
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 34.0 bits (76), Expect = 0.026
Identities = 13/151 (8%), Positives = 35/151 (23%), Gaps = 3/151 (1%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPE 180
++GAG A A+ L+ + + + E + + +++ M +
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD 67
Query: 181 PHACKARPN--GRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEY 238
+ ++ + + + L
Sbjct: 68 LGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEVLRDPKVKEALSPIKFNRWDLPE 127
Query: 239 FKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL 269
+ + G TVE +
Sbjct: 128 VDPETMQTSEPWVFAGGDIVG-MANTTVESV 157
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 34.2 bits (77), Expect = 0.031
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAG 150
D I+GAG AG A ++ K+ L+
Sbjct: 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKV 39
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 34.5 bits (78), Expect = 0.032
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLE 148
FD ++IGAG AG A ++S+ LL
Sbjct: 8 FDAVVIGAGGAGMRAALQISQ-SGQTCALLS 37
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 34.1 bits (77), Expect = 0.035
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 110 EEQDDDMTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152
++ D D II+GAGS+G A +++ KV ++E+ +
Sbjct: 43 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 86
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 33.5 bits (76), Expect = 0.047
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLE 148
+ +I+GAG +G A L++ +V LL
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQKGV-RVGLLT 32
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 32.9 bits (73), Expect = 0.062
Identities = 20/154 (12%), Positives = 43/154 (27%), Gaps = 4/154 (2%)
Query: 121 IIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
I++G+ G L + ++ E G F + G+ + D N +
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLS--AGMQLYLEGKVKDVNSVRYM 61
Query: 180 EPHACKARP-NGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEY 238
++R N + + G + + + + G E+
Sbjct: 62 TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDGV 121
Query: 239 FKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYA 272
+ + H N +T E +A
Sbjct: 122 RPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFA 155
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 33.3 bits (75), Expect = 0.075
Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 27/111 (24%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMT 177
D +++GAG +G RL E V ++E DV G+ W +
Sbjct: 8 VDVLVVGAGFSGLYALYRLRE-LGRSVHVIETA------GDVGGV----------WYWNR 50
Query: 178 MP--------EPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYD 220
P + W + I + Y A+ +D
Sbjct: 51 YPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI--LRYINFVADKFD 99
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 32.0 bits (71), Expect = 0.090
Identities = 21/152 (13%), Positives = 40/152 (26%), Gaps = 20/152 (13%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPE 180
+I+G G G LA +LS+ ++V +++ ++ +
Sbjct: 4 VIVGNGPGGFELAKQLSQ--TYEVTVIDKEPVPY------------------YSKPMLSH 43
Query: 181 PHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYFK 240
A N ++ I A+ E VL
Sbjct: 44 YIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGA 103
Query: 241 KSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYA 272
+ D + H ++T YA
Sbjct: 104 PNVDLARRSGIHTGRGILIDDNFRTSAKDVYA 135
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 31.8 bits (71), Expect = 0.12
Identities = 12/108 (11%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Query: 122 IIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPE- 180
++G G+ G + L + + +V + ++ I ++ N
Sbjct: 5 VLGCGALGQLWLTALCK-QGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLAT 63
Query: 181 ----PHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEA 224
KA + + ++ I + G E+ +
Sbjct: 64 SDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ 111
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 30.0 bits (66), Expect = 0.50
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEEPF 155
F++IG G+A A + +VL++ E P+
Sbjct: 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY 43
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 30.0 bits (66), Expect = 0.55
Identities = 11/88 (12%), Positives = 22/88 (25%), Gaps = 1/88 (1%)
Query: 122 IIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPEP 181
I+GAG+ G L+ L + +V + + +
Sbjct: 5 ILGAGAMGSALSVPLVD-NGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPE 63
Query: 182 HACKARPNGRCYWARGKVMGGSSTINYM 209
K N G ++ +
Sbjct: 64 QLEKCLENAEVVLLGVSTDGVLPVMSRI 91
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 29.8 bits (65), Expect = 0.70
Identities = 19/156 (12%), Positives = 39/156 (25%), Gaps = 6/156 (3%)
Query: 121 IIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
+++G G+ G A + +V L+E + + + +
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYYTCYLSNEVIGGDRKLESIKHGYDGL 65
Query: 180 EPHA---CKARPNGRCYWARGKVMGGSSTINYM--IYARGNAEDYDEWEAMGNEGWGYDE 234
H G + G + Y + A G YD+ E +
Sbjct: 66 RAHGIQVVHDSATGIDPDKKLVKTAGGAEFGYDRCVVAPGIELIYDKIEQRAGKIAQIAG 125
Query: 235 VLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLP 270
+ + + H G +P
Sbjct: 126 LTNDAGWCPVDIKTFESSIHKGIHVIGDASIANPMP 161
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 28.7 bits (63), Expect = 0.79
Identities = 14/121 (11%), Positives = 31/121 (25%), Gaps = 14/121 (11%)
Query: 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
F +IG G G + L +VL ++ E+ S +
Sbjct: 3 FAVIGLGRFGGSIVKELHR-MGHEVLAVDINEEKVNAY----------ASYATHAVIANA 51
Query: 180 EPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDY-DEWEAMGNEGWGYDEVLEY 238
++ + I ++ + + + + +VLE
Sbjct: 52 TEENELLSLG--IRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEK 109
Query: 239 F 239
Sbjct: 110 I 110
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 29.3 bits (64), Expect = 0.98
Identities = 18/202 (8%), Positives = 45/202 (22%), Gaps = 24/202 (11%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNY 175
+ +++GAG A L + + L+ G R
Sbjct: 2 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVG-------------DEAERPYDRPPL 47
Query: 176 MTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEV 235
H + C A + + + + + + G V
Sbjct: 48 SKDFMAHGDAEKIRLDCKRAPEVEW-----LLGVTAQSFDPQAHTVALSDGRTLPYGTLV 102
Query: 236 LEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERDLNA 295
L + + G + ++ L + +R+ +
Sbjct: 103 LATGAAPRAVLANDALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTR-----QRNPLS 157
Query: 296 ENQIGVMHLQTTTRHGERLSTN 317
+ G ++ +
Sbjct: 158 GRFERIETWSNAQNQGIAVARH 179
>d1nsta_ c.37.1.5 (A:) Heparan sulfate
N-deacetylase/N-sulfotransferase domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 301
Score = 29.1 bits (64), Expect = 1.5
Identities = 39/286 (13%), Positives = 72/286 (25%), Gaps = 18/286 (6%)
Query: 93 PEQSNEGYDKDHKNNNREEQDDDMTFDFIIIGAGSAGC-VLANRLSEIKKWKVLLLEAGI 151
P + DK HK+ +E+ D +IIG G L L L
Sbjct: 2 PLWQDPCEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPD----LSSNYP 57
Query: 152 EEPFFADVPGLAPLISRSNIDWNYMTMPEPHACKAR------PNGRCYWARGKVMGGSST 205
F ++ IDW P P + N +
Sbjct: 58 SSETFEEIQFFNGHNYHKGIDWYMEFFPIPSNTTSDFYFEKSANYFDSEVAPRRAAALLP 117
Query: 206 INYMIYARGNAED-----YDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGK 260
++ N D Y A + E D K +N
Sbjct: 118 KAKVLTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPG 177
Query: 261 GGYQTVE-WLPYADKNLPVLIKAWKEKGYPERDLN-AENQIGVMHLQTTTRHGERLSTNG 318
+E WL N +++ + P + ++ + +GV + + G
Sbjct: 178 WYATHIERWLSAYHANQILVLDGKLLRTEPAKVMDMVQKFLGVTNTIDYHKTLAFDPKKG 237
Query: 319 AFIRPIRKKRKNLTILTEAHVTRIICDKTPNKHKKLVAKSVEFFYK 364
+ + + + ++ + + K K
Sbjct: 238 FWCQLLEGGKTKCLGKSKGRKYPEMDLDSRAFLKDYYRDHNIELSK 283
>d1tuba2 d.79.2.1 (A:246-440) Tubulin alpha-subunit {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 195
Score = 28.4 bits (63), Expect = 1.8
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Query: 155 FFADVPGLAPLISRSNIDWNYMTMPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARG 214
F + AP+IS +++ E P + + G ++Y RG
Sbjct: 22 FP--LATYAPVISAEKAYHEQLSVAEITNACFEPANQM--VKCDPRHGKYMACCLLY-RG 76
Query: 215 NAEDYDEWEAMGNE 228
+ D A+
Sbjct: 77 DVVPKDVNAAIATI 90
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex,
C-terminal domain {Thermus aquaticus [TaxId: 271]}
Length = 126
Score = 27.1 bits (60), Expect = 2.6
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 121 IIIGAGSAGCVLANRLSEIKKWKV 144
I+G G G LA+ + +++
Sbjct: 7 CIVGMGRLGSALADYPGFGESFEL 30
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 258
Score = 28.0 bits (61), Expect = 2.6
Identities = 16/166 (9%), Positives = 38/166 (22%), Gaps = 8/166 (4%)
Query: 119 DFIIIGAGSAGC-VLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMT 177
IIIG G L LS + A E F D + +
Sbjct: 7 QTIIIGVRKGGTRALLEMLSLHPD-----VAAAENEVHFFDWEEHYSQGLGWYLTQMPFS 61
Query: 178 MPEPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAED--YDEWEAMGNEGWGYDEV 235
P + P + + + ++ + + ++ + +
Sbjct: 62 SPHQLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKP 121
Query: 236 LEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIK 281
+ + + + WL + ++
Sbjct: 122 YPPIEDLLMRDGRLNLDYKALNRSLYHAHMLNWLRFFPLGHIHIVD 167
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic
enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}
Length = 298
Score = 28.0 bits (62), Expect = 3.0
Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Query: 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
+ GAG A +AN + + + + E I+ + D G LI +
Sbjct: 28 VLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKG---LIVKGRASL--TPEK 82
Query: 180 EPHACKARPNGRCYWARGKVMG 201
E A + +
Sbjct: 83 EHFAHEHCEMKNLEDIVKDIKP 104
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 28.1 bits (61), Expect = 3.0
Identities = 23/141 (16%), Positives = 33/141 (23%), Gaps = 25/141 (17%)
Query: 121 IIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
IIGAG +G V A L K +V L E G+ WNY +
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERR------GSPGGV----------WNYTSTL 51
Query: 180 EPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGW--------G 231
N +Y E ++ +
Sbjct: 52 SNKLPVPSTNPILTTEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPH 111
Query: 232 YDEVLEYFKKSEDNEDKEIYH 252
+ EY + I
Sbjct: 112 RHTIQEYQRIYAQPLLPFIKL 132
>d2e2dc1 b.40.3.1 (C:1001-1180) TIMP-2 {Cow (Bos taurus) [TaxId:
9913]}
Length = 180
Score = 27.6 bits (61), Expect = 3.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 183 ACKARPNGRCYWARG 197
AC R +G C W RG
Sbjct: 166 ACIKRSDGSCAWYRG 180
>d1tq1a_ c.46.1.3 (A:) Thiosulfate
sulfurtransferase/Senescence-associated protein {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 119
Score = 26.4 bits (57), Expect = 4.3
Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Query: 211 YARGNAED--YDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGG-YQTVE 267
+++G+A + G G + S + I +
Sbjct: 34 FSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLL 93
Query: 268 WLPYAD-KNLPVLIKAWKEKGYP 289
+ K++ AW + G P
Sbjct: 94 HAGFTGVKDIVGGYSAWAKNGLP 116
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic
enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Length = 308
Score = 27.2 bits (60), Expect = 5.1
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMP 179
++ GAG+A +A + + + + E + D+ GL +R ++ ++
Sbjct: 28 YLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGL-VTKNRKEMNPRHVQFA 86
Query: 180 EPHACKAR-PNGRCYWARGKVMGGSS 204
+ G ++G S+
Sbjct: 87 KDMPETTSILEVIRAARPGALIGAST 112
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 26.8 bits (58), Expect = 5.6
Identities = 10/73 (13%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Query: 122 IIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPEP 181
++G G+ G A L+ K VL + + G + +
Sbjct: 6 VLGLGNGGHAFAAYLAL-KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTS 64
Query: 182 HACKARPNGRCYW 194
A +
Sbjct: 65 DIGLAVKDADVIL 77
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 491
Score = 26.6 bits (58), Expect = 8.8
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVL 145
FD I+IG G ++A S + +VL
Sbjct: 6 DFDVIVIGTGLPESIIAAACSRSGQ-RVL 33
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 26.3 bits (57), Expect = 9.0
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 122 IIGAGSAGCVLANRLSEIKKWKVLLL---EAGIEEPFFADVPGLAPLISRSNIDWNYMTM 178
+ G+G+ G LA LS+ K +V + E + L + + + +
Sbjct: 12 VFGSGAFGTALAMVLSK-KCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSD 70
Query: 179 PEPHACKA 186
E A
Sbjct: 71 VEKAYNGA 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,158,598
Number of extensions: 104052
Number of successful extensions: 445
Number of sequences better than 10.0: 1
Number of HSP's gapped: 412
Number of HSP's successfully gapped: 92
Length of query: 567
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 477
Effective length of database: 1,171,896
Effective search space: 558994392
Effective search space used: 558994392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)