Query psy10424
Match_columns 187
No_of_seqs 149 out of 956
Neff 5.7
Searched_HMMs 46136
Date Fri Aug 16 17:32:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10424.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10424hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3071|consensus 100.0 7E-50 1.5E-54 345.7 9.2 164 19-184 18-230 (274)
2 PF01151 ELO: GNS1/SUR4 family 100.0 7.7E-49 1.7E-53 334.6 11.6 155 27-185 1-213 (250)
3 PTZ00251 fatty acid elongase; 100.0 1.6E-48 3.4E-53 337.7 8.5 154 19-179 13-221 (272)
4 KOG3072|consensus 100.0 2.1E-40 4.6E-45 285.9 -0.3 153 20-179 28-227 (282)
5 KOG3187|consensus 64.3 71 0.0015 27.5 9.1 72 88-160 70-142 (223)
6 COG5548 Small integral membran 32.3 22 0.00047 26.9 0.9 14 48-61 69-82 (105)
7 PF06210 DUF1003: Protein of u 19.7 2.6E+02 0.0057 21.1 4.8 50 29-81 1-50 (108)
8 PF03605 DcuA_DcuB: Anaerobic 19.1 94 0.002 28.7 2.5 31 85-122 74-104 (364)
9 PF15206 FAM209: FAM209 family 18.1 1E+02 0.0022 24.9 2.3 27 20-47 30-56 (150)
10 PF11120 DUF2636: Protein of u 15.2 2.3E+02 0.005 19.6 3.2 24 160-183 2-29 (62)
No 1
>KOG3071|consensus
Probab=100.00 E-value=7e-50 Score=345.65 Aligned_cols=164 Identities=44% Similarity=0.766 Sum_probs=153.7
Q ss_pred cCcccccccCccCchHHHHHHHhhhheeeecccccccCCCCcccchhHHhHHHHHHHHHHHHHH----------------
Q psy10424 19 EDEEVDSRFFMSSWVPVTVTLVAYLVFVLYIGPKWMATRKPFQINRILMVYNLGQTLASLYVVS---------------- 82 (187)
Q Consensus 19 ~d~r~~~wpl~~s~~~~~~i~~~Yl~~V~~~g~~~M~~Rkp~~L~~~~~~~N~~l~~~S~~~~~---------------- 82 (187)
+|++++ ||++++|+++..++.+|+ +|...||++|+||||++||+++.+||++|++.|++++.
T Consensus 18 ~~~~v~-~~~l~s~~~~~~il~~yl-~v~~~G~~~m~nrkp~~l~~~~~vyN~~~vl~s~~i~~~~~~~~~~~~~y~l~c 95 (274)
T KOG3071|consen 18 PDDRVR-SPLLSSPWPLLSILLAYL-FVLKLGPKLMRNRKPLKLRGLSQVYNLGQVLLSAAIFLEGELWRWLKTAYNLRC 95 (274)
T ss_pred CCcccc-chhccCcHHHHHHHHHHH-HHHHhcHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccceEE
Confidence 677777 999999999999999999 77689999999999999999999999999999999665
Q ss_pred -------------------------------HHHHHHhcCCCceeEEeeecchhhhhhhhhhccccccchhHHHHHHHHH
Q psy10424 83 -------------------------------SVFFVLKKKQSHITFLHVYHHAAMLLTSWAYLRFIKGEQVIFLGALNCL 131 (187)
Q Consensus 83 -------------------------------Tvf~VLRKK~~qvsfLHvYHH~~~~~~~w~~~~~~~~~~~~~~~~~Ns~ 131 (187)
|+|+|||||++|+||||+|||++|+..+|.++++.++|++++.+.+|++
T Consensus 96 ~~~~~~~~~~~~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g~~~~~~~lNs~ 175 (274)
T KOG3071|consen 96 QPCFPSDHEPKLRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGGHGFFAILLNSF 175 (274)
T ss_pred EecCCCCCCcceeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCceeeeeeehhhh
Confidence 9999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHHHHhhCCCcccchhHHHHhhHHHHHHHhHHhHHHHHH-HHh-hhhh
Q psy10424 132 VHAIMYSYYFFASFGPKAQKYLWWKKYITKLQMVSTEVKNLVVRRA-WVQ-SLAT 184 (187)
Q Consensus 132 VH~iMY~YY~lsa~g~~~~~~~~~k~~iT~~QivQF~~~~~~~~~~-~~~-~~~~ 184 (187)
||++||+||++||+|++.++.+|||+++|..|++||++....+..+ +++ +|..
T Consensus 176 VHviMY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~~~~~~~~~~~~~~~~c~~ 230 (274)
T KOG3071|consen 176 VHVIMYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFLILFVHTLYVHLFKPGCCF 230 (274)
T ss_pred HHHHHHHHHHHHhhCcCccccchHHHHHHHHHHHHHHHHHHHHhheeeecCCCCC
Confidence 9999999999999999999999999999999999999997777666 677 6754
No 2
>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established. The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane
Probab=100.00 E-value=7.7e-49 Score=334.61 Aligned_cols=155 Identities=42% Similarity=0.767 Sum_probs=144.0
Q ss_pred cCccCchHHHHHHHhhhheeeecccccccCCCCcccchhHHhHHHHHHHHHHHHHH------------------------
Q psy10424 27 FFMSSWVPVTVTLVAYLVFVLYIGPKWMATRKPFQINRILMVYNLGQTLASLYVVS------------------------ 82 (187)
Q Consensus 27 pl~~s~~~~~~i~~~Yl~~V~~~g~~~M~~Rkp~~L~~~~~~~N~~l~~~S~~~~~------------------------ 82 (187)
.|++||++++.++++|+++| +.||++||||||++||+++.+||++|+++|+++++
T Consensus 1 Wl~~~~~~~~~~~~~Yl~~V-~~g~~~m~~Rkp~~Lk~~~~~~N~~l~~~S~~~~~~~~~~~~~~~~~~g~~~~~C~~~~ 79 (250)
T PF01151_consen 1 WLMSNPWFPILIVVLYLLFV-FLGPRFMKNRKPFNLKTLIIVYNLFLVVFSAYMFYGILPALFSSLFKGGLYSSFCQPVD 79 (250)
T ss_pred CcccCCHHHHHHHHHHHHHH-HHHHHHHhhCCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC
Confidence 16799999999999999999 88999999999999999999999999999999887
Q ss_pred ----------------------------HHHHHHhcCCCceeEEeeecchhhhhhhhhhccccccchhHHHHHHHHHHHH
Q psy10424 83 ----------------------------SVFFVLKKKQSHITFLHVYHHAAMLLTSWAYLRFIKGEQVIFLGALNCLVHA 134 (187)
Q Consensus 83 ----------------------------Tvf~VLRKK~~qvsfLHvYHH~~~~~~~w~~~~~~~~~~~~~~~~~Ns~VH~ 134 (187)
|+|+||||| |+||||||||+++++++|.++++.++|+.++++.+|++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~fylSK~~EllDTvflvLrkK--~lsfLHvYHH~~~~~~~w~~~~~~~~~~~~~~~~~N~~VH~ 157 (250)
T PF01151_consen 80 FDPDSYSSGRVGFWYWLFYLSKYYELLDTVFLVLRKK--QLSFLHVYHHASTLLYCWISYKYGPGGQIWFIAALNSFVHV 157 (250)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhCC--CcchhHHhhhhhhhhhhhheeeeccccchhHHHHHHHHHHH
Confidence 999999999 59999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHhhCCCcccchhHHHHhhHHHHHHHhHHhHHHHHHHHh------hhhhc
Q psy10424 135 IMYSYYFFASFGPKAQKYLWWKKYITKLQMVSTEVKNLVVRRAWVQ------SLATR 185 (187)
Q Consensus 135 iMY~YY~lsa~g~~~~~~~~~k~~iT~~QivQF~~~~~~~~~~~~~------~~~~~ 185 (187)
+||+||+++|+|.|. .+.||||+||.+||+||+++++.+.++.+. +|++|
T Consensus 158 iMY~YY~l~a~g~~~-~~~~~k~~IT~~Qi~QF~~~~~~~~~~~~~~~~~~~~C~~~ 213 (250)
T PF01151_consen 158 IMYSYYFLSALGIRK-VPRWWKKYITSLQIVQFVIGIVHTVYALYYYFFPGGDCDTS 213 (250)
T ss_pred HHHHHHHHHhccccc-chhHHHHHHhHHhhhhhHHHHHHHHHHhheeccCCCCCCcc
Confidence 999999999999751 236999999999999999999998888776 89665
No 3
>PTZ00251 fatty acid elongase; Provisional
Probab=100.00 E-value=1.6e-48 Score=337.73 Aligned_cols=154 Identities=27% Similarity=0.466 Sum_probs=137.9
Q ss_pred cCcccccccCccCchHHHHHHHhhhheeeeccccccc----CCCCcc-cchhHHhHHHHHHHHHHHHHH-----------
Q psy10424 19 EDEEVDSRFFMSSWVPVTVTLVAYLVFVLYIGPKWMA----TRKPFQ-INRILMVYNLGQTLASLYVVS----------- 82 (187)
Q Consensus 19 ~d~r~~~wpl~~s~~~~~~i~~~Yl~~V~~~g~~~M~----~Rkp~~-L~~~~~~~N~~l~~~S~~~~~----------- 82 (187)
..+|+++| +++||++++.++++|+++|+ .||++|| +|||++ ||+++++||++|+++|+++++
T Consensus 13 ~~~~~~~w-l~~~~~~~~~i~~~Yl~~V~-~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~~~~~~~~~ 90 (272)
T PTZ00251 13 DGHAVQKW-LASNVDICVYIAAAYLTFVF-KGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVVPPLLNNLR 90 (272)
T ss_pred CcHHHHHH-HHhCCHHHHHHHHHHHHHHH-HHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999 89999999999999999995 8999997 499999 999999999999999998876
Q ss_pred --------------------------------------HHHHHHhcCCCceeEEeeecchhhhhhhhhhccccccchhH-
Q psy10424 83 --------------------------------------SVFFVLKKKQSHITFLHVYHHAAMLLTSWAYLRFIKGEQVI- 123 (187)
Q Consensus 83 --------------------------------------Tvf~VLRKK~~qvsfLHvYHH~~~~~~~w~~~~~~~~~~~~- 123 (187)
|+|+||||| |+||||||||++|++.+|.++. ++++..
T Consensus 91 ~~g~~~~~C~~~~~~~~~~~~~~~~~~f~lsK~~El~DTvF~VLRKK--qvsFLHvYHH~~~~~~~w~~~~--~g~~~~~ 166 (272)
T PTZ00251 91 KYGLHDTLCTFREDEFYTGKVGVAMGLFSISKVPEFGDTFFLIMGGK--KLPFLSWFHHVTIFLYAWMSYQ--QGSSIWI 166 (272)
T ss_pred hcCcceeeecCCCCcchhHHHHHHHHHHHHHHHHHHHhHhhhhhcCC--CchHHHHHHHHHHHHHHHHHHh--CCCcHHH
Confidence 999999999 5999999999999999999864 333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcccchhHHHHhhHHHHHHHhHHhHHHHHHHH
Q psy10424 124 FLGALNCLVHAIMYSYYFFASFGPKAQKYLWWKKYITKLQMVSTEVKNLVVRRAWV 179 (187)
Q Consensus 124 ~~~~~Ns~VH~iMY~YY~lsa~g~~~~~~~~~k~~iT~~QivQF~~~~~~~~~~~~ 179 (187)
+++.+|++||++||+||+++|+|+|. ...+|||+||.+||+||+++++++.+..+
T Consensus 167 ~~~~lNs~VH~iMY~YY~lsa~g~~~-~~~~~kk~IT~lQi~Qfv~~~~~~~~~~~ 221 (272)
T PTZ00251 167 CAAAMNYFVHSIMYFYFALSEAGFKK-LVKPFAMYITLLQITQMVGGLFVSGYVIV 221 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36999999999999999999999872 23469999999999999999999877764
No 4
>KOG3072|consensus
Probab=100.00 E-value=2.1e-40 Score=285.94 Aligned_cols=153 Identities=31% Similarity=0.490 Sum_probs=136.2
Q ss_pred CcccccccCccCchHHHHHHHhhhheeeecccccccCCCCcccchhHHhHHHHHHHHHHHHHH-----------------
Q psy10424 20 DEEVDSRFFMSSWVPVTVTLVAYLVFVLYIGPKWMATRKPFQINRILMVYNLGQTLASLYVVS----------------- 82 (187)
Q Consensus 20 d~r~~~wpl~~s~~~~~~i~~~Yl~~V~~~g~~~M~~Rkp~~L~~~~~~~N~~l~~~S~~~~~----------------- 82 (187)
+++++.| +-+.+...+.++++|++++ +.|+++|+|||||+|++++.+||.+++++|+.+++
T Consensus 28 ~~~~~~~-~~~~~~~si~is~~Y~v~i-f~~q~fM~~RkpF~L~~pL~lWn~~La~FSi~g~lr~~~~~~~~~~~~Gf~~ 105 (282)
T KOG3072|consen 28 SESVVKF-FQEHWPLSIHISIAYLVLI-FGGQNFMKNRKPFQLTKPLNLWNFCLAAFSILGALRTIPEFLAVFRAAGFKG 105 (282)
T ss_pred hHHHHHH-HHhccchhHHHHHHHHHHH-HHHHHHHhcCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 4445555 3355566789999999999 88999999999999999999999999999999887
Q ss_pred ------------------------------HHHHHHhcCCCceeEEeeecchhhhhhhhhhccccccchhHHHHHHHHHH
Q psy10424 83 ------------------------------SVFFVLKKKQSHITFLHVYHHAAMLLTSWAYLRFIKGEQVIFLGALNCLV 132 (187)
Q Consensus 83 ------------------------------Tvf~VLRKK~~qvsfLHvYHH~~~~~~~w~~~~~~~~~~~~~~~~~Ns~V 132 (187)
|+|+|||||| ++|||||||+++++++|.++.... +.+.+++.+|.+|
T Consensus 106 s~C~~~~~~~~~~~fW~~~fvlSK~~ElgDT~FiVLRKrP--liFlHWYHHi~~~iy~~~~y~~~~-a~~rw~i~mNy~v 182 (282)
T KOG3072|consen 106 SYCDANNLGLSVSGFWSWLFVLSKAPELGDTIFIVLRKRP--LIFLHWYHHILVLIYAWHSYIEKV-AWGRWFIWMNYLV 182 (282)
T ss_pred eeeecccCCcchHHHHHHHHHHHhhhhhhceeEEEeccCc--cEEEechhhheeeeeeeeecccCC-cCceEEEEEehhH
Confidence 9999999999 999999999999999999987544 5567899999999
Q ss_pred HHHHHHHHHHHhhCCCcccchhHHHHhhHHHHHHHhHHhHHHHHHHH
Q psy10424 133 HAIMYSYYFFASFGPKAQKYLWWKKYITKLQMVSTEVKNLVVRRAWV 179 (187)
Q Consensus 133 H~iMY~YY~lsa~g~~~~~~~~~k~~iT~~QivQF~~~~~~~~~~~~ 179 (187)
|++||+||+++|+|.|.|+ +.++.||.+||+||++++.+..++.+
T Consensus 183 Ha~MY~YY~lrsl~ir~Pk--~vam~iTtlQi~Qm~i~~~i~~~v~~ 227 (282)
T KOG3072|consen 183 HAFMYSYYALRSLGIRLPK--SVAMAITTLQIVQMVIGCYIGTHVYY 227 (282)
T ss_pred HHHHHHHHHHHHcCCCCCh--HHHHHHHHHHHHHHHHHHheeeEEEE
Confidence 9999999999999999874 79999999999999999999866543
No 5
>KOG3187|consensus
Probab=64.31 E-value=71 Score=27.47 Aligned_cols=72 Identities=28% Similarity=0.420 Sum_probs=47.6
Q ss_pred HhcCCCceeEEeeecchhhhhhhhhhccccccch-hHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhHHHHhh
Q psy10424 88 LKKKQSHITFLHVYHHAAMLLTSWAYLRFIKGEQ-VIFLGALNCLVHAIMYSYYFFASFGPKAQKYLWWKKYIT 160 (187)
Q Consensus 88 LRKK~~qvsfLHvYHH~~~~~~~w~~~~~~~~~~-~~~~~~~Ns~VH~iMY~YY~lsa~g~~~~~~~~~k~~iT 160 (187)
+-|.+.=+++.|+-|-..+++..-.......+.. .......=+..-.+=|+||+.+..|- .++..-|-||=+
T Consensus 70 ~v~S~~v~t~~Qv~sRl~il~~i~~~~~~~~~~~~~~~l~~~ws~tEIiRY~fY~f~~~~~-~p~~l~wlRYt~ 142 (223)
T KOG3187|consen 70 LVKSSPVVTLFQVSSRLFILWGIFHMCSIIQASAVVFFLLIAWSLTEIIRYSFYAFNLLGV-LPKLLTWLRYTL 142 (223)
T ss_pred cccCCceeeeeeecccceehhhhhhccchhhccchHHHHHHHHHHHHHHHHHHHHHHhccC-CchhhhHhhhhh
Confidence 3455555677888887776665555544433222 33344566888899999999999997 455566777744
No 6
>COG5548 Small integral membrane protein [Function unknown]
Probab=32.26 E-value=22 Score=26.89 Aligned_cols=14 Identities=21% Similarity=0.577 Sum_probs=12.3
Q ss_pred ecccccccCCCCcc
Q psy10424 48 YIGPKWMATRKPFQ 61 (187)
Q Consensus 48 ~~g~~~M~~Rkp~~ 61 (187)
+.++|+||.|||.+
T Consensus 69 ~~~~R~~~sRKpvP 82 (105)
T COG5548 69 FFALRLVRSRKPVP 82 (105)
T ss_pred hcchhccccCCCcc
Confidence 56899999999985
No 7
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=19.68 E-value=2.6e+02 Score=21.11 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=28.5
Q ss_pred ccCchHHHHHHHhhhheeeecccccccCCCCcccchhHHhHHHHHHHHHHHHH
Q psy10424 29 MSSWVPVTVTLVAYLVFVLYIGPKWMATRKPFQINRILMVYNLGQTLASLYVV 81 (187)
Q Consensus 29 ~~s~~~~~~i~~~Yl~~V~~~g~~~M~~Rkp~~L~~~~~~~N~~l~~~S~~~~ 81 (187)
++||.+....++...+-+ ....+.-.+++||--+ .++-|+++++.+++.+
T Consensus 1 ~GS~~Fi~~~~~~~~~Wi--~~N~~~~~~~~fDpyP-FilLnl~lS~~Aa~~a 50 (108)
T PF06210_consen 1 GGSWTFIIIFTVFLAVWI--LLNILAPPRPAFDPYP-FILLNLVLSLEAAYQA 50 (108)
T ss_pred CCcHHHHHHHHHHHHHHH--HHHhhccccCCCCCcc-HHHHHHHHHHHHHHHH
Confidence 356766655555544433 2233333334555444 6677998888887764
No 8
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=19.12 E-value=94 Score=28.66 Aligned_cols=31 Identities=26% Similarity=0.330 Sum_probs=21.4
Q ss_pred HHHHhcCCCceeEEeeecchhhhhhhhhhccccccchh
Q psy10424 85 FFVLKKKQSHITFLHVYHHAAMLLTSWAYLRFIKGEQV 122 (187)
Q Consensus 85 f~VLRKK~~qvsfLHvYHH~~~~~~~w~~~~~~~~~~~ 122 (187)
==+|||+|+|++|| ..+.+|.-.-....|+.
T Consensus 74 ek~LRk~Pk~It~l-------AP~vt~~~T~~~GTgh~ 104 (364)
T PF03605_consen 74 EKILRKNPKYITFL-------APLVTYLFTFLAGTGHV 104 (364)
T ss_pred HHHHHhCCCcEEEe-------hhHHHHHHHHHhcccHH
Confidence 45899999999998 45666765444444444
No 9
>PF15206 FAM209: FAM209 family
Probab=18.09 E-value=1e+02 Score=24.86 Aligned_cols=27 Identities=19% Similarity=0.427 Sum_probs=19.4
Q ss_pred CcccccccCccCchHHHHHHHhhhheee
Q psy10424 20 DEEVDSRFFMSSWVPVTVTLVAYLVFVL 47 (187)
Q Consensus 20 d~r~~~wpl~~s~~~~~~i~~~Yl~~V~ 47 (187)
.+.+++| |.+.|...+.++++|+++=+
T Consensus 30 pehaqgW-LgsKwlWL~Fvv~lyvilKf 56 (150)
T PF15206_consen 30 PEHAQGW-LGSKWLWLLFVVVLYVILKF 56 (150)
T ss_pred hhhhcch-hhhHHHHHHHHHHHHheeEe
Confidence 4567889 65666667778888887763
No 10
>PF11120 DUF2636: Protein of unknown function (DUF2636); InterPro: IPR019995 Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=15.17 E-value=2.3e+02 Score=19.60 Aligned_cols=24 Identities=4% Similarity=-0.060 Sum_probs=16.3
Q ss_pred hHHHHHHHhHHhHHH----HHHHHhhhh
Q psy10424 160 TKLQMVSTEVKNLVV----RRAWVQSLA 183 (187)
Q Consensus 160 T~~QivQF~~~~~~~----~~~~~~~~~ 183 (187)
+..||+|.++-|++. .+++.+.|+
T Consensus 2 ~i~DiiQii~l~AlI~~pLGyl~~~~~~ 29 (62)
T PF11120_consen 2 NISDIIQIIILCALIFFPLGYLARRWLP 29 (62)
T ss_pred CHHHHHHHHHHHHHHHHhHHHHHHHHhH
Confidence 567999988887776 335555443
Done!