BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10429
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O44451|ODPB_CAEEL Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2
Length = 352
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 160/200 (80%), Positives = 183/200 (91%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVRDALN A+DEE+ RD++VFL+GEEVA YDGAYK+S+GLWKK+GDKRV+DTPITE+GF
Sbjct: 25 MTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGF 84
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGIAVGAA AGLRP+CEFMTFNFSMQAID IINSAAKT+YMSAG V VPIVFRGPNGAA+
Sbjct: 85 AGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAA 144
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVAAQHSQ F AW+ CPGLKVV PY++EDAKGLLKAAIRD +PVVFLENE+LYG +P+
Sbjct: 145 GVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPV 204
Query: 181 GDEALSKDFVLPIGKAKVEK 200
GDE LS DFV+PIGKAK+E+
Sbjct: 205 GDEVLSDDFVVPIGKAKIER 224
>sp|P49432|ODPB_RAT Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Rattus norvegicus GN=Pdhb PE=1 SV=2
Length = 359
Score = 345 bits (884), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 183/201 (91%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+A+N +DEE+ RDEKVFLLGEEVA YDGAYKVSRGLWKKYGDKR++DTPI+E+GF
Sbjct: 33 LTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGF 92
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGIAVGAAMAGLRP+CEFMTFNFSMQAID +INSAAKT+YMSAG VPIVFRGPNGA++
Sbjct: 93 AGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASA 152
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVAAQHSQCF AW+ CPGLKVVSP+NSEDAKGL+K+AIRD +PVV LENEL+YGV + +
Sbjct: 153 GVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFEL 212
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
EA SKDF++PIGKAK+E+Q
Sbjct: 213 PTEAQSKDFLIPIGKAKIERQ 233
>sp|Q9D051|ODPB_MOUSE Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Mus musculus GN=Pdhb PE=1 SV=1
Length = 359
Score = 344 bits (883), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 183/201 (91%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+A+N +DEE+ RDEKVFLLGEEVA YDGAYKVSRGLWKKYGDKR++DTPI+E+GF
Sbjct: 33 LTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGF 92
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGIAVGAAMAGLRP+CEFMTFNFSMQAID +INSAAKT+YMSAG VPIVFRGPNGA++
Sbjct: 93 AGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASA 152
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVAAQHSQCF AW+ CPGLKVVSP+NSEDAKGL+K+AIRD +PVV LENEL+YGV + +
Sbjct: 153 GVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFEL 212
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
EA SKDF++PIGKAK+E+Q
Sbjct: 213 PAEAQSKDFLIPIGKAKIERQ 233
>sp|P11177|ODPB_HUMAN Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Homo sapiens GN=PDHB PE=1 SV=3
Length = 359
Score = 342 bits (876), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 181/201 (90%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVRDA+N +DEE+ RDEKVFLLGEEVA YDGAYKVSRGLWKKYGDKR++DTPI+E+GF
Sbjct: 33 VTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGF 92
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGIAVGAAMAGLRP+CEFMTFNFSMQAID +INSAAKT+YMS G VPIVFRGPNGA++
Sbjct: 93 AGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASA 152
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVAAQHSQCF AW+ CPGLKVVSP+NSEDAKGL+K+AIRD +PVV LENEL+YGV +
Sbjct: 153 GVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEF 212
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
EA SKDF++PIGKAK+E+Q
Sbjct: 213 PPEAQSKDFLIPIGKAKIERQ 233
>sp|Q5RE79|ODPB_PONAB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pongo abelii GN=PDHB PE=2 SV=1
Length = 359
Score = 342 bits (876), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 181/201 (90%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVRDA+N +DEE+ RDEKVFLLGEEVA YDGAYKVSRGLWKKYGDKR++DTPI+E+GF
Sbjct: 33 VTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGF 92
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGIAVGAAMAGLRP+CEFMTFNFSMQAID +INSAAKT+YMS G VPIVFRGPNGA++
Sbjct: 93 AGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASA 152
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVAAQHSQCF AW+ CPGLKVVSP+NSEDAKGL+K+AIRD +PVV LENEL+YGV +
Sbjct: 153 GVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEF 212
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
EA SKDF++PIGKAK+E+Q
Sbjct: 213 PPEAQSKDFLIPIGKAKIERQ 233
>sp|P11966|ODPB_BOVIN Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Bos taurus GN=PDHB PE=1 SV=2
Length = 359
Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 155/201 (77%), Positives = 183/201 (91%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+A+N +DEE+ RDEKVFLLGEEVA YDGAYKVSRGLWKKYGDKR++DTPI+E+GF
Sbjct: 33 VTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGF 92
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGIAVGAAMAGLRP+CEFMTFNFSMQAID +INSAAKT+YMS G +VPIVFRGPNGA++
Sbjct: 93 AGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASA 152
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVAAQHSQCF AW+ CPGLKVVSP++SEDAKGL+K+AIRD +PVV LENEL+YGV + +
Sbjct: 153 GVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEL 212
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
EA SKDF++PIGKAK+E+Q
Sbjct: 213 PSEAQSKDFLIPIGKAKIERQ 233
>sp|Q38799|ODPB1_ARATH Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2
Length = 363
Score = 323 bits (829), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 148/201 (73%), Positives = 174/201 (86%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVRDALNSA+DEEM+ D KVF++GEEV Y GAYK+++GL +KYG +RV DTPITE GF
Sbjct: 36 MTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGF 95
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
GI VGAA AGL+PV EFMTFNFSMQAIDHIINSAAK+ YMSAG +NVPIVFRGPNGAA+
Sbjct: 96 TGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAA 155
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GV AQHSQC+ AW+ PGLKV++PY++EDA+GLLKAAIRDPDPVVFLENELLYG +P+
Sbjct: 156 GVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPI 215
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+EAL F LPIGKAK+E++
Sbjct: 216 SEEALDSSFCLPIGKAKIERE 236
>sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os09g0509200 PE=2
SV=1
Length = 376
Score = 320 bits (819), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 170/201 (84%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVR+ALNSALDEEM+ D VFL+GEEV Y GAYK+S+GL KYG +RVLDTPITE GF
Sbjct: 43 MTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGF 102
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
GIAVGAA GLRPV EFMTFNFSMQAIDHIINSAAK+ YMSAG ++VPIVFRGPNGAA+
Sbjct: 103 TGIAVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAA 162
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GV AQHSQC+ AW+ PGLKV+ PY++EDA+GLLKAAIRDPDPVVFLENELLYG +P+
Sbjct: 163 GVGAQHSQCYAAWYAHVPGLKVLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPI 222
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
E L F LPIGKAK+E++
Sbjct: 223 SAEVLDSSFALPIGKAKIERE 243
>sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os08g0536000 PE=2
SV=1
Length = 374
Score = 319 bits (818), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 169/201 (84%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVR+ALNSALDEEM+ D VFL+GEEV Y GAYK+S+GL KYG RVLDTPITE GF
Sbjct: 41 MTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEAGF 100
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
GI VGAA GLRPV EFMTFNFSMQAIDHIINSAAK+ YMSAG +NVPIVFRGPNGAA+
Sbjct: 101 TGIGVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAA 160
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GV AQHSQC+ AW+ PGLKV++PY++EDA+GLLKAAIRDPDPVVFLENELLYG +P+
Sbjct: 161 GVGAQHSQCYAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPV 220
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
E L F LPIGKAK+E++
Sbjct: 221 SAEVLDSSFCLPIGKAKIEQE 241
>sp|Q09171|ODPB_SCHPO Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pdb1 PE=4 SV=1
Length = 366
Score = 317 bits (813), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 146/200 (73%), Positives = 171/200 (85%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVRDALNSA++EEM RD++VFL+GEEVA Y+GAYK+SRGL K+G KRV+DTPITE+GF
Sbjct: 38 MTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGF 97
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A GAA AGLRP+CEFMTFNFSMQAIDHI+NSAA+T YMS G PIVFRGPNG A+
Sbjct: 98 TGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAA 157
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
VAAQHSQ F W+ PGLKVVSPY++EDA+GLLKAAIRDP+PVV LENE+LYG +P+
Sbjct: 158 AVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPI 217
Query: 181 GDEALSKDFVLPIGKAKVEK 200
EALS+DFVLP G AKVE+
Sbjct: 218 SKEALSEDFVLPFGLAKVER 237
>sp|P26269|ODPB_ASCSU Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Ascaris suum PE=1 SV=1
Length = 361
Score = 310 bits (793), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 141/200 (70%), Positives = 171/200 (85%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVRDALN+ALDEE+ RD++VFL+GEEVA YDGAYK+S+GLWKKYGD R+ DTPITE+
Sbjct: 34 VTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAI 93
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG++VGAAM GLRP+CEFM+ NFSMQ IDHIINSAAK YMSAG +VPIVFRG NGAA
Sbjct: 94 AGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAV 153
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GVA QHSQ F AWF CPG+KVV PY+ EDA+GLLKAA+RD +PV+ LENE+LYG+++P+
Sbjct: 154 GVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPV 213
Query: 181 GDEALSKDFVLPIGKAKVEK 200
EA S DFVLP G+AK+++
Sbjct: 214 SPEAQSPDFVLPFGQAKIQR 233
>sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 359
Score = 306 bits (784), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 168/201 (83%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVRDALNSALD EM+ D KVFL+GEEV Y GAYKV++GL +KYG +RVLDTPITE GF
Sbjct: 26 MTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGF 85
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
GI VGAA GL+PV EFMTFNFSMQAIDHIINSAAK+ YMSAG ++VPIVFRG NG A+
Sbjct: 86 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAA 145
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GV AQHS C+ +W+ CPGLKV+ P+++EDA+GLLKAAIRDPDPVVFLENELLYG +P+
Sbjct: 146 GVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPV 205
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
E L F LPIGKAK+E++
Sbjct: 206 SAEVLDSSFWLPIGKAKIERE 226
>sp|Q86HX0|ODPB_DICDI Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1
Length = 356
Score = 295 bits (755), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 133/201 (66%), Positives = 170/201 (84%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVRDA+NSALDEE+ARDEKVF++GEEVA Y+GAYK+++GL+ KYG R++DTPITE GF
Sbjct: 29 VTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGF 88
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AGI VGAAMAG RP+ EFMTFNF+MQAIDHIINS+AKT YMS G V PIV+RGPNG +
Sbjct: 89 AGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPT 148
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
V AQHSQCF AW+ PGLKVV+P+++ D +GLLK+AIRD +PVV+LE+ELLY ++ +
Sbjct: 149 AVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDL 208
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
D+ K++++PIGKAKVE++
Sbjct: 209 SDQEQDKEYLVPIGKAKVERE 229
>sp|P32473|ODPB_YEAST Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDB1 PE=1 SV=2
Length = 366
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVR+ALNSA+ EE+ RD+ VFL+GEEVA Y+GAYKVS+GL ++G++RV+DTPITE GF
Sbjct: 39 MTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGF 98
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+AVGAA+ GL+P+ EFM+FNFSMQAIDH++NSAAKT YMS GT +VFRGPNGAA
Sbjct: 99 TGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAV 158
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
GV AQHSQ F W+ PGLKV+ PY++EDA+GLLKAAIRDP+PVVFLENELLYG + +
Sbjct: 159 GVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEI 218
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+EALS +F LP KAK+E++
Sbjct: 219 SEEALSPEFTLPY-KAKIERE 238
>sp|Q9R9N4|ODPB_RHIME Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium
meliloti (strain 1021) GN=pdhB PE=3 SV=2
Length = 460
Score = 283 bits (725), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 163/202 (80%), Gaps = 7/202 (3%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MTVR+AL A+ EEM +E VF++GEEVA Y GAYKV++GL +++G +RV+DTPITE GF
Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGF 197
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+ VGAAM GLRP+ EFMTFNF+MQAID IINSAAKT YMS G + PIVFRGP+GAA+
Sbjct: 198 AGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAA 257
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQY-- 178
VAAQHSQC+ AW++ PGLKVV PY + DAKGLLKAAIRDP+PV+FLENE+LYG +
Sbjct: 258 RVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEV 317
Query: 179 PMGDEALSKDFVLPIGKAKVEK 200
P D DFVLPIGKA++ +
Sbjct: 318 PKLD-----DFVLPIGKARIHR 334
>sp|O66113|ODPB_ZYMMO Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhB PE=3 SV=2
Length = 462
Score = 270 bits (690), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 158/200 (79%), Gaps = 3/200 (1%)
Query: 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFA 61
T+R+AL A+ EEM RD++VF++GEEVA Y GAYKV++GL +++G +RV+DTPI+E GF+
Sbjct: 140 TLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFS 199
Query: 62 GIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASG 121
GI VGAAM GLRPV EFMT NFSMQAIDHIINSAAKT YMS G V PIVFRGPNGAA
Sbjct: 200 GIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPR 259
Query: 122 VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
V AQH+Q FG W+ PGL V++PY++ DAKGLLKAAIR DPVVFLE ELLYG +
Sbjct: 260 VGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTF--- 316
Query: 182 DEALSKDFVLPIGKAKVEKQ 201
D DFVLPIGKA++ ++
Sbjct: 317 DVPKMDDFVLPIGKARIIRE 336
>sp|Q1RJX3|ODPB_RICBR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
bellii (strain RML369-C) GN=pdhB PE=3 SV=1
Length = 325
Score = 269 bits (688), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 161/201 (80%), Gaps = 4/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+AL A+ EEM RD+KVF++GEEVA Y GAYKV++GL +++G KRV+DTPITE GF
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+AVGAA AGLRP+ EFMTFNF+MQA+DHI+NSAAKT YMS G V PIVFRGPNGAAS
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAAS 122
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
VAAQHSQ + A ++ PGLKVV+PY++ED KGL+ AIRD +PV+FLENE+LYG + +
Sbjct: 123 RVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFDI 182
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+ +P GKAKV K+
Sbjct: 183 SENVEP----IPFGKAKVLKE 199
>sp|Q9ZDR3|ODPB_RICPR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhB PE=3 SV=1
Length = 326
Score = 268 bits (684), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 159/201 (79%), Gaps = 4/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+AL A+ EEM RDEKVF++GEEVA Y GAYKV++GL +++G KRV+DTPITE GF
Sbjct: 3 ITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGF 62
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+AVGAA AGLRP+ EFMTFNF+MQA DHI+NSAAKT YMS G V PIVFRGPNGAAS
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAAS 122
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
VAAQHSQ + A ++ PGLKVV+PY++ED KGL+ AIRD +PV+FLENE+LYG + +
Sbjct: 123 RVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDV 182
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
D +P KAK+ K+
Sbjct: 183 PDIIEP----IPFSKAKILKE 199
>sp|Q68XA8|ODPB_RICTY Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhB PE=3
SV=1
Length = 326
Score = 266 bits (680), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 159/201 (79%), Gaps = 4/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+AL A+ EEM RD+KVF++GEEVA Y GAYKV++GL +++G KRV+DTPITE GF
Sbjct: 3 ITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGF 62
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+AVGAA AGLRP+ EFMTFNF+MQA DHI+NSAAKT YMS G V PIVFRGPNGAAS
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAAS 122
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
VAAQHSQ + A ++ PGLKVV+PY++ED KGL+ AIRD +PV+FLENE+LYG + +
Sbjct: 123 RVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDV 182
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
D +P KAK+ K+
Sbjct: 183 PDIIEP----IPFSKAKILKE 199
>sp|Q92IS2|ODPB_RICCN Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhB PE=3
SV=1
Length = 326
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 160/203 (78%), Gaps = 8/203 (3%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+AL A+ EEM RD+KVF++GEEVA Y GAYKV++GL +++G KRV+DTPITE GF
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+AVGAA AGLRP+ EFMTFNF+MQA DHI+NSAAKT YMS G V PIVFRGPNGAAS
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAAS 122
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQY-- 178
VAAQHSQ + A ++ PGLKVV+PY++ED KGL+ AIRD +PVVFLENE+LYG +
Sbjct: 123 RVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFDV 182
Query: 179 PMGDEALSKDFVLPIGKAKVEKQ 201
P E +P G+AK+ ++
Sbjct: 183 PKTIEP------IPFGQAKILRE 199
>sp|Q4UKQ7|ODPB_RICFE Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhB PE=3
SV=1
Length = 326
Score = 263 bits (673), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 159/201 (79%), Gaps = 4/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+TVR+AL A+ EEM RD+KVF++GEEVA Y GAYKV++GL +++G KRV+DTPITE GF
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+AVGAA AGLRP+ EFMTFNF+MQA DHI+NSAAKT YMS G PIVFRGPNGAAS
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAAS 122
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
VAAQHSQ + A ++ PGLKVV+PY++ED KGL+ AIRD +PV+FLENE+LYG + +
Sbjct: 123 RVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDV 182
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+ +P G+AK+ ++
Sbjct: 183 PETIEP----IPFGQAKILRE 199
>sp|Q85FX1|ODPB_CYAME Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon
merolae GN=pdhB PE=3 SV=1
Length = 326
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 138/200 (69%), Gaps = 10/200 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL A+DEEMARD++VF+LGE+V Y G+YKV++ L KYGD RVLDTPI E F G+A
Sbjct: 9 EALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMA 68
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAAM GL+PV E M +F + A + I N+A Y S G ++P+V RGP G ++A
Sbjct: 69 IGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIPLVIRGPGGIGKQLSA 128
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ A+F PGLK+V +PYN AKGLLKAAIRD +PV+FLE+ LLY ++
Sbjct: 129 EHSQRIEAYFQAVPGLKIVACSTPYN---AKGLLKAAIRDNNPVLFLEHVLLYNLK---- 181
Query: 182 DEALSKDFVLPIGKAKVEKQ 201
E +++VLP+ KA+V ++
Sbjct: 182 QEIPKQEYVLPLDKAQVVRE 201
>sp|Q6B8T1|ODPB_GRATL Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria
tenuistipitata var. liui GN=pdhB PE=3 SV=1
Length = 323
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 128/197 (64%), Gaps = 10/197 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
DAL A DEEM D VF+LGE+V Y G+YKV++ L KYGD RVLDTPI E F G+A
Sbjct: 8 DALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMGMA 67
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAA+ GLRP+ E M +F + A + I N+A Y S G +PIV RGP G + A
Sbjct: 68 IGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIPIVIRGPGGVGRQLGA 127
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ A+F PGLK+V +PYN AKGLLK+AIRD +PV+F E+ LLY ++
Sbjct: 128 EHSQRLEAYFQAIPGLKIVACSTPYN---AKGLLKSAIRDNNPVIFFEHVLLYNLK---- 180
Query: 182 DEALSKDFVLPIGKAKV 198
DE + ++ LP+ KA++
Sbjct: 181 DELPNDEYFLPLDKAEL 197
>sp|P51266|ODPB_PORPU Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
purpurea GN=pdhB PE=3 SV=1
Length = 331
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 10/200 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
DAL +A DEEM +D V ++GE+V Y G+YKV++ L KYGD RVLDTPI E F G+A
Sbjct: 8 DALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMA 67
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAA+ GLRP+ E M +F + A + I N+A Y S G +P+V RGP G + A
Sbjct: 68 IGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGA 127
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ A+F PGLK+V +PYN AKGLLK+AIRD +PVVF E+ LLY +Q
Sbjct: 128 EHSQRLEAYFQAIPGLKIVACSTPYN---AKGLLKSAIRDNNPVVFFEHVLLYNLQ---- 180
Query: 182 DEALSKDFVLPIGKAKVEKQ 201
+E ++++P+ KA+V ++
Sbjct: 181 EEIPEDEYLIPLDKAEVVRK 200
>sp|Q1XDM1|ODPB_PORYE Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
yezoensis GN=pdhB PE=3 SV=1
Length = 331
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 128/196 (65%), Gaps = 10/196 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
DAL +A DEEMA+D V ++GE+V Y G+YKV++ L KYGD RVLDTPI E F G+A
Sbjct: 8 DALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMA 67
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAA+ GLRP+ E M +F + A + I N+A Y S G +P+V RGP G + A
Sbjct: 68 IGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGA 127
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ A+F PGLK+V +PYN AKGLLK+AIRD +PVVF E+ LLY +Q
Sbjct: 128 EHSQRLEAYFQAIPGLKIVACSTPYN---AKGLLKSAIRDNNPVVFFEHVLLYNLQ---- 180
Query: 182 DEALSKDFVLPIGKAK 197
+E +++ LP+ K +
Sbjct: 181 EEIPQEEYFLPLNKVE 196
>sp|P86222|ODPB_MESAU Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
(Fragments) OS=Mesocricetus auratus GN=PDHB PE=1 SV=1
Length = 211
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 120/199 (60%), Gaps = 58/199 (29%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+A+N +DEE+ RDEKVFLLGEEVA YDGAYKVSR +
Sbjct: 1 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRTYYMS-------------------- 40
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
AGL+PV PIVFRGPNGA++GVAA
Sbjct: 41 -----AGLQPV---------------------------------PIVFRGPNGASAGVAA 62
Query: 125 QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEA 184
QHSQCF AW+ CPGLKVVSP+NSEDAKGL+K+AIRD +PVV LENEL+YGV + + EA
Sbjct: 63 QHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEA 122
Query: 185 LSKDFVLPIGKAKVEKQVI 203
SKDF++PIGK +E +VI
Sbjct: 123 QSKDFLIPIGKEGIECEVI 141
>sp|Q1ACL0|ODPB_CHAVU Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris
GN=pdhB PE=3 SV=1
Length = 326
Score = 183 bits (465), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 130/197 (65%), Gaps = 10/197 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+ALN + EE+ RD KVF++GE++ Y G+YKV++GL++KYG+ R+LDTPI E F GIA
Sbjct: 8 EALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIA 67
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAAM GLRP+ E M F + A + I N+A Y S G P+V RGP G + A
Sbjct: 68 IGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGGVGRQLGA 127
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ ++F PGL++V +PYN AKGL+K+AIR +P++F E+ LLY ++
Sbjct: 128 EHSQRLESYFQSVPGLQMVACSTPYN---AKGLIKSAIRSQNPIIFFEHVLLYNIK---- 180
Query: 182 DEALSKDFVLPIGKAKV 198
+ K++++P+ KA++
Sbjct: 181 ENIPQKEYLVPLEKAEL 197
>sp|Q9MUR4|ODPB_MESVI Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma
viride GN=pdhB PE=3 SV=1
Length = 327
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 132/207 (63%), Gaps = 13/207 (6%)
Query: 1 MTVR---DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITE 57
MTVR +ALN A+DEEMAR++KV LLGE++ Y G+YKV++ L+ KYG+ RV+DTPI E
Sbjct: 1 MTVRFLFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAE 60
Query: 58 IGFAGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNG 117
F G A+GAAM GL V E M F + A I N+ S G ++PIV RGP G
Sbjct: 61 NSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQISNNMGMLSATSGGHYHIPIVLRGPGG 120
Query: 118 AASGVAAQHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLY 174
+ A+HSQ +F PGL++V +PYN AKGLLK+AIR +P+ FLE+ LLY
Sbjct: 121 VGKQLGAEHSQRLECYFQSVPGLQIVACSTPYN---AKGLLKSAIRSKNPIFFLEHVLLY 177
Query: 175 GVQYPMGDEALSKDFVLPIGKAKVEKQ 201
++ + D D+VLP+ KA++ +Q
Sbjct: 178 NLKAEVPD----NDYVLPLEKAEIVRQ 200
>sp|Q8MA03|ODPB_CHAGL Pyruvate dehydrogenase E1 component subunit beta
OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1
Length = 326
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 127/197 (64%), Gaps = 10/197 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL ALDEEM RD V ++GE+V Y G+YKV++G +KYGD R+LDTPI E F G+A
Sbjct: 8 EALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMA 67
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAAM GLRP+ E M F + A + I N+A Y S G +PIV RGP G + A
Sbjct: 68 IGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIPIVIRGPGGVGRQLGA 127
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ ++F PGL++V +PYN KGLLK+AIR+ +PV+F E+ LLY +
Sbjct: 128 EHSQRLESYFQSVPGLQMVACSTPYN---GKGLLKSAIRNDNPVIFFEHVLLYN----LN 180
Query: 182 DEALSKDFVLPIGKAKV 198
+ + ++++L + KA+V
Sbjct: 181 ENLIEQEYLLCLEKAEV 197
>sp|Q9TLS3|ODPB_CYACA Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium
caldarium GN=pdhB PE=3 SV=1
Length = 327
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 4/198 (2%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
M + +AL +A+DEEM +D VF++GE+V Y G+YKV++ L KYGD RVLD PI E F
Sbjct: 4 MFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAENSF 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+GAAM GLRP+ E M F + A + I N+ + Y S G N+P+V RGP G
Sbjct: 64 TGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGGIGK 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
+AA+HSQ + F PGL++V+ + +AKGLLK+AI + P++FLE+ LLY ++ +
Sbjct: 124 QLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYNLKGFV 183
Query: 181 GDEALSKDFVLPIGKAKV 198
DE ++ LP+ KA+V
Sbjct: 184 PDE----EYYLPLDKAEV 197
>sp|P37941|ODBB_BACSU 2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis
(strain 168) GN=bfmBAB PE=1 SV=1
Length = 327
Score = 180 bits (456), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
M+ DA+N A+ EEM RD +VF+LGE+V G +K + GL++++G++RV+DTP+ E
Sbjct: 4 MSYIDAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
AG+ +GAAM G+RP+ E +F M A++ II+ AAK Y S + PIV R P G
Sbjct: 64 AGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
A HSQ A F PGLK+V P DAKGLLKAA+RD DPV+F E++ Y + +
Sbjct: 124 HGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRL---I 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
E + D+VLPIGKA V+++
Sbjct: 181 KGEVPADDYVLPIGKADVKRE 201
>sp|Q32RM2|ODPB_ZYGCR Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema
circumcarinatum GN=pdhB PE=3 SV=2
Length = 325
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 124/194 (63%), Gaps = 4/194 (2%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL L EEM RD +V ++GE+V Y G+YKV++G ++YGD R+LDTPI E F G+A
Sbjct: 8 EALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMA 67
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAAM GLRPV E M F + A + I N+A Y S G +PIV RGP G + A
Sbjct: 68 IGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIPIVIRGPGGVGRQLGA 127
Query: 125 QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEA 184
+HSQ ++F PGL++V+ +AKGL+K+AIR +P++ E+ LLY ++ + +E
Sbjct: 128 EHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYNLKEDLAEE- 186
Query: 185 LSKDFVLPIGKAKV 198
++++ + KA+V
Sbjct: 187 ---EYLVCLEKAEV 197
>sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum
punctulatum GN=pdhB PE=3 SV=1
Length = 328
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
M + +AL L EEM RD KV ++GE+V Y G+YKV++G +KYGD R+LDTPI E F
Sbjct: 4 MLLFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSF 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+GAAM GLRPV E M F + A + I N+A Y S +PIV RGP G
Sbjct: 64 TGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIPIVIRGPGGVGR 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
+ A+HSQ ++F PGL++V+ +AKGL+K++IR +PV+ E+ LLY ++ +
Sbjct: 124 QLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLKETI 183
Query: 181 GDEALSKDFVLPIGKAKV 198
D ++++ + KA++
Sbjct: 184 PD----NEYLVCLEKAEI 197
>sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 BETA PE=2 SV=1
Length = 406
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 123/197 (62%), Gaps = 10/197 (5%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL L+EEM RD V ++GE+V Y G+YKV++GL K+GD RVLDTPI E F G+
Sbjct: 90 EALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTGMG 149
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAAM GLRPV E M F + A + I N+ Y S G +P+V RGP G + A
Sbjct: 150 IGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGVGRQLGA 209
Query: 125 QHSQCFGAWFTQCPGLKVV---SPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMG 181
+HSQ ++F PG+++V +PYN AKGL+KAAIR +PV+ E+ LLY ++ +
Sbjct: 210 EHSQRLESYFQSIPGIQMVACSTPYN---AKGLMKAAIRSENPVILFEHVLLYNLKEKIP 266
Query: 182 DEALSKDFVLPIGKAKV 198
DE D+V + +A++
Sbjct: 267 DE----DYVCNLEEAEM 279
>sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Arabidopsis thaliana GN=E1-BETA-2 PE=1 SV=1
Length = 406
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 113/179 (63%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL L+EEM RD V ++GE+V Y G+YKV++GL K+GD RVLDTPI E F G+
Sbjct: 90 EALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTGMG 149
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
+GAAM GLRPV E M F + A + I N+ Y S G +P+V RGP G + A
Sbjct: 150 IGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGVGRQLGA 209
Query: 125 QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDE 183
+HSQ ++F PG+++V+ +AKGL+KAAIR +PV+ E+ LLY ++ + DE
Sbjct: 210 EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKESIPDE 268
>sp|Q2QM55|ODPB3_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os12g0616900 PE=2
SV=1
Length = 391
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 112/179 (62%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL AL EEM D V + GE+V Y G+YKV++GL + +GD RVLDTPI E FAG+
Sbjct: 75 EALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAENSFAGMG 134
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
VGAAM GLRP+ E M F + A + I N+ Y S G +PIV RGP G + A
Sbjct: 135 VGAAMKGLRPIVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKIPIVIRGPGGVGRQLGA 194
Query: 125 QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDE 183
+HSQ ++F PGL++V+ +AKGL+KAAIR +PVV E+ LLY ++ + DE
Sbjct: 195 EHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYNLKEKIPDE 253
>sp|Q10G39|ODPB4_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os03g0645100 PE=2
SV=1
Length = 400
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 4/194 (2%)
Query: 5 DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIA 64
+AL AL EEM D V + GE+V Y G+YKV++GL + +GD RVLDTPI E F G+
Sbjct: 84 EALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAENSFTGMG 143
Query: 65 VGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAA 124
VGAAM GLRPV E M F + A + I N+ Y S G +PIV RGP G + A
Sbjct: 144 VGAAMKGLRPVVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKIPIVIRGPGGVGRQLGA 203
Query: 125 QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEA 184
+HSQ ++F PGL++V+ +AKGL+KAAIR +PVV E+ LLY ++ + DE
Sbjct: 204 EHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYNLKEKIPDE- 262
Query: 185 LSKDFVLPIGKAKV 198
++VL + +A++
Sbjct: 263 ---EYVLCLEEAEM 273
>sp|Q5SLR3|ODBB_THET8 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1
SV=1
Length = 324
Score = 163 bits (413), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 119/201 (59%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ ALN ALDEEMA+D +V +LGE+V G + V+ GL +KYG RV+DTP++E
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G A+G A GLRPV E ++ D +++ AK Y S G P+V R P+G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
HSQ A F GLKVV+ DAKGLLKAAIRD DPVVFLE + LY +
Sbjct: 124 RGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLY---RSV 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +D+ LPIGKA + ++
Sbjct: 181 KEEVPEEDYTLPIGKAALRRE 201
>sp|Q72GU2|ODBB_THET2 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3
SV=1
Length = 324
Score = 160 bits (404), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 118/201 (58%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ ALN ALDEEMA+D +V +LGE+V G + V+ GL +KYG RV+DTP++E
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G A+G A GLRPV E ++ D +++ AK Y S G P+V R P+G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
HSQ A F GLKVV+ DAKGLLKAAIRD DPVVFLE + LY +
Sbjct: 124 RGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLY---RSV 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +D+ L IGKA + ++
Sbjct: 181 KEEVPEEDYTLSIGKAALRRE 201
>sp|A2CI50|ODPB_CHLAT Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus
atmophyticus GN=pdhB PE=3 SV=1
Length = 335
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 7/204 (3%)
Query: 1 MTVR---DALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITE 57
M VR +AL A+DEEM R+++V L+GE++ Y G+YKV++GL+ KYG RV+DTPI E
Sbjct: 1 MAVRFLFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAE 60
Query: 58 IGFAGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNG 117
F G AVGAA GL PV E M F + A I N+ S G VP+V RGP G
Sbjct: 61 YSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGG 120
Query: 118 AASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQ 177
+ A+HSQ ++F PGL++V+ +AKGLLK+AIR +P++F+E+ LLY ++
Sbjct: 121 IGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYNLK 180
Query: 178 YPMGDEALSKDFVLPIGKAKVEKQ 201
E D++LP+ KA++ ++
Sbjct: 181 ----GEVPDNDYLLPLEKAELVRE 200
>sp|P35488|ODPB_ACHLA Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma
laidlawii GN=pdhB PE=1 SV=1
Length = 327
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 116/203 (57%), Gaps = 7/203 (3%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
+T+ +A+N A+D+ M +DE + + GE+ G ++V+ GL KKYG+ RV DTPI E
Sbjct: 4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G AVG A+ GL+P+ E F ++ AA+ S G VP+V R P+G
Sbjct: 64 VGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVPMVLRLPHGGGI 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLY--GVQY 178
HS+ F PGLKVV+P DAKGLL AAI DPDPVVFLE + +Y G Q
Sbjct: 124 RALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQ- 182
Query: 179 PMGDEALSKDFVLPIGKAKVEKQ 201
E ++ + +PIGKAKV KQ
Sbjct: 183 ----EVPAEMYEIPIGKAKVVKQ 201
>sp|Q5HGZ0|ODPB_STAAC Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain COL) GN=pdhB PE=3 SV=1
Length = 325
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ RGP G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRGPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|P0A0A2|ODPB_STAAW Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MW2) GN=pdhB PE=3 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ R P G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|P0A0A3|ODPB_STAAU Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus GN=pdhB PE=1 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ R P G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|Q6GAC0|ODPB_STAAS Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=pdhB PE=3 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ R P G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|Q6GHZ1|ODPB_STAAR Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=pdhB PE=3 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ R P G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|P99063|ODPB_STAAN Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain N315) GN=pdhB PE=1 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ R P G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|P0A0A1|ODPB_STAAM Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ D+ V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D I A+T + S GT P+ R P G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++IR DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYTIDIGKANVKKE 201
>sp|Q8CPN2|ODPB_STAES Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 112/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ RDE V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D + A+T + S GT P+ R P G
Sbjct: 64 GGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++I+ DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYKIDIGKANVKKE 201
>sp|Q5HQ75|ODPB_STAEQ Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3
SV=1
Length = 325
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 112/201 (55%), Gaps = 3/201 (1%)
Query: 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGF 60
MT+ A+N AL E+ RDE V + GE+V + G ++V+ GL K++G+ RV DTP+ E G
Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 61 AGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS 120
G+A+G A+ G RPV E F + D + A+T + S GT P+ R P G
Sbjct: 64 GGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGV 123
Query: 121 GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPM 180
H+ Q PGLKVV P DAKGLL ++I+ DPVV+LE+ LY
Sbjct: 124 HTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY---RSF 180
Query: 181 GDEALSKDFVLPIGKAKVEKQ 201
+E +++ + IGKA V+K+
Sbjct: 181 REEVPEEEYKIDIGKANVKKE 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,271,452
Number of Sequences: 539616
Number of extensions: 3106598
Number of successful extensions: 7683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 7586
Number of HSP's gapped (non-prelim): 153
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)