Query psy10429
Match_columns 207
No_of_seqs 102 out of 1082
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 17:38:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w85_B Pyruvate dehydrogenase 100.0 9.4E-49 3.2E-53 340.9 18.8 204 1-207 3-206 (324)
2 1ik6_A Pyruvate dehydrogenase; 100.0 4.6E-49 1.6E-53 348.4 17.0 203 2-207 52-254 (369)
3 2ozl_B PDHE1-B, pyruvate dehyd 100.0 5E-49 1.7E-53 345.0 16.4 207 1-207 15-221 (341)
4 1umd_B E1-beta, 2-OXO acid deh 100.0 2.8E-48 9.5E-53 337.8 18.0 204 1-207 4-207 (324)
5 1qs0_B 2-oxoisovalerate dehydr 100.0 6E-48 2E-52 337.5 18.2 207 1-207 5-224 (338)
6 2bfd_B 2-oxoisovalerate dehydr 100.0 1.3E-47 4.3E-52 336.2 17.4 203 1-207 21-224 (342)
7 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 1.2E-37 4.2E-42 291.7 19.8 187 1-207 322-510 (629)
8 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 2.9E-37 9.8E-42 288.9 19.3 187 1-207 319-508 (621)
9 3kom_A Transketolase; rossmann 100.0 5E-37 1.7E-41 288.7 18.1 187 2-207 356-554 (663)
10 3l84_A Transketolase; TKT, str 100.0 6.7E-37 2.3E-41 286.4 16.5 184 2-207 339-530 (632)
11 3uk1_A Transketolase; structur 100.0 7.4E-37 2.5E-41 289.1 15.0 187 2-207 396-602 (711)
12 3m49_A Transketolase; alpha-be 100.0 4E-37 1.4E-41 290.2 12.1 186 2-207 380-581 (690)
13 2jgd_A 2-oxoglutarate dehydrog 100.0 1.6E-36 5.3E-41 293.2 14.5 198 2-206 592-815 (933)
14 3mos_A Transketolase, TK; thia 100.0 4E-36 1.4E-40 280.9 16.7 185 1-207 313-503 (616)
15 3rim_A Transketolase, TK; TPP, 100.0 1.1E-36 3.9E-41 287.2 13.1 188 2-207 376-589 (700)
16 1gpu_A Transketolase; transfer 100.0 7.5E-36 2.6E-40 281.7 15.9 188 1-207 356-559 (680)
17 2r8o_A Transketolase 1, TK 1; 100.0 2.1E-35 7.2E-40 278.3 15.2 188 1-207 355-554 (669)
18 2yic_A 2-oxoglutarate decarbox 100.0 1.5E-35 5.2E-40 284.8 11.9 189 13-207 529-754 (868)
19 1itz_A Transketolase; calvin c 100.0 2.4E-34 8.1E-39 271.3 17.9 188 1-207 366-567 (675)
20 1r9j_A Transketolase; domains, 100.0 1.2E-34 3.9E-39 273.3 15.6 188 1-207 352-551 (673)
21 2e6k_A Transketolase; structur 100.0 2.5E-34 8.5E-39 270.3 14.5 188 1-207 349-546 (651)
22 2xt6_A 2-oxoglutarate decarbox 100.0 1.6E-34 5.6E-39 283.4 13.1 191 11-207 772-999 (1113)
23 2qtc_A Pyruvate dehydrogenase 100.0 2.9E-28 9.9E-33 234.7 17.0 192 2-207 493-728 (886)
24 3ahc_A Phosphoketolase, xylulo 99.9 7.6E-24 2.6E-28 201.8 15.9 190 4-207 432-664 (845)
25 1yd7_A 2-keto acid:ferredoxin 99.5 1.8E-13 6.2E-18 121.6 9.6 123 44-178 62-194 (395)
26 2c42_A Pyruvate-ferredoxin oxi 98.9 1.4E-08 4.8E-13 101.2 13.3 120 44-174 50-175 (1231)
27 1t9b_A Acetolactate synthase, 96.1 0.048 1.6E-06 51.2 11.5 149 6-168 465-632 (677)
28 1v5e_A Pyruvate oxidase; oxido 96.0 0.021 7.1E-07 52.6 8.7 113 52-175 47-167 (590)
29 1ozh_A ALS, acetolactate synth 95.5 0.29 1E-05 44.6 14.2 126 36-174 39-172 (566)
30 3hww_A 2-succinyl-5-enolpyruvy 95.0 0.46 1.6E-05 43.1 13.7 150 6-171 9-170 (556)
31 1ybh_A Acetolactate synthase, 94.9 0.39 1.3E-05 43.9 13.1 126 37-174 41-174 (590)
32 1q6z_A BFD, BFDC, benzoylforma 94.7 0.45 1.5E-05 42.8 12.8 115 49-174 40-163 (528)
33 2pan_A Glyoxylate carboligase; 94.6 0.43 1.5E-05 43.9 12.5 126 36-173 55-189 (616)
34 1t9b_A Acetolactate synthase, 94.5 0.52 1.8E-05 44.1 13.1 115 49-174 122-244 (677)
35 2nxw_A Phenyl-3-pyruvate decar 94.5 0.73 2.5E-05 41.9 13.7 128 36-175 49-189 (565)
36 2wvg_A PDC, pyruvate decarboxy 94.4 0.8 2.7E-05 41.6 13.7 126 36-174 31-171 (568)
37 2uz1_A Benzaldehyde lyase; thi 94.3 0.17 5.9E-06 46.0 9.0 124 36-172 32-164 (563)
38 4feg_A Pyruvate oxidase; carba 94.1 1.2 4E-05 40.9 14.3 128 36-174 39-173 (603)
39 2iht_A Carboxyethylarginine sy 94.1 0.33 1.1E-05 44.3 10.4 116 48-174 49-173 (573)
40 2pgn_A Cyclohexane-1,2-dione h 94.0 0.56 1.9E-05 42.9 11.8 127 36-174 32-167 (589)
41 3eya_A Pyruvate dehydrogenase 93.9 1.5 5E-05 39.7 14.4 127 36-174 31-164 (549)
42 2x7j_A 2-succinyl-5-enolpyruvy 93.3 0.85 2.9E-05 41.8 11.8 127 36-173 59-199 (604)
43 2c31_A Oxalyl-COA decarboxylas 93.1 1.5 5.1E-05 39.8 13.0 125 37-174 39-173 (568)
44 1ybh_A Acetolactate synthase, 93.0 0.38 1.3E-05 44.0 8.9 112 47-168 416-553 (590)
45 3lq1_A 2-succinyl-5-enolpyruvy 92.9 1.1 3.8E-05 40.8 11.9 149 7-171 13-177 (578)
46 2q28_A Oxalyl-COA decarboxylas 92.8 2 6.7E-05 38.9 13.4 125 37-174 37-171 (564)
47 2q28_A Oxalyl-COA decarboxylas 92.7 0.67 2.3E-05 42.0 10.1 111 47-168 411-539 (564)
48 1q6z_A BFD, BFDC, benzoylforma 92.3 0.28 9.6E-06 44.2 6.9 112 47-168 392-520 (528)
49 2vk8_A Pyruvate decarboxylase 92.2 0.76 2.6E-05 41.6 9.8 114 49-174 44-172 (563)
50 2vbi_A Pyruvate decarboxylase; 92.1 0.94 3.2E-05 41.1 10.2 125 37-174 32-171 (566)
51 3eya_A Pyruvate dehydrogenase 91.9 0.41 1.4E-05 43.4 7.6 112 47-168 396-524 (549)
52 3hww_A 2-succinyl-5-enolpyruvy 91.8 0.4 1.4E-05 43.6 7.4 97 61-168 422-534 (556)
53 1ozh_A ALS, acetolactate synth 91.6 0.42 1.4E-05 43.5 7.4 112 47-168 410-538 (566)
54 2vbf_A Branched-chain alpha-ke 91.3 4 0.00014 36.9 13.6 112 51-174 66-192 (570)
55 4feg_A Pyruvate oxidase; carba 90.5 0.6 2.1E-05 42.8 7.4 112 47-168 410-541 (603)
56 1v5e_A Pyruvate oxidase; oxido 90.4 0.85 2.9E-05 41.7 8.2 112 47-168 403-534 (590)
57 2pan_A Glyoxylate carboligase; 90.0 1.5 5E-05 40.3 9.5 112 47-168 432-575 (616)
58 1ovm_A Indole-3-pyruvate decar 89.7 4.7 0.00016 36.2 12.5 116 50-174 45-172 (552)
59 3lq1_A 2-succinyl-5-enolpyruvy 89.6 0.93 3.2E-05 41.3 7.8 97 60-168 441-555 (578)
60 2c31_A Oxalyl-COA decarboxylas 89.3 1 3.5E-05 40.8 7.8 111 47-168 416-542 (568)
61 2uz1_A Benzaldehyde lyase; thi 89.2 0.29 1E-05 44.5 4.1 111 47-168 409-541 (563)
62 2x7j_A 2-succinyl-5-enolpyruvy 88.6 0.3 1E-05 44.9 3.7 98 59-168 459-575 (604)
63 1ovm_A Indole-3-pyruvate decar 88.6 1 3.5E-05 40.6 7.2 112 47-168 398-527 (552)
64 2iht_A Carboxyethylarginine sy 88.5 0.98 3.4E-05 41.1 7.1 112 47-168 426-556 (573)
65 3uk1_A Transketolase; structur 86.1 1.8 6.1E-05 40.9 7.5 100 60-169 160-283 (711)
66 3m49_A Transketolase; alpha-be 85.6 3.1 0.00011 39.0 8.9 100 60-169 145-269 (690)
67 2vbi_A Pyruvate decarboxylase; 84.5 1.1 3.8E-05 40.6 5.1 111 48-168 400-528 (566)
68 3l84_A Transketolase; TKT, str 84.5 3 0.0001 38.8 8.1 99 60-169 119-238 (632)
69 2o1s_A 1-deoxy-D-xylulose-5-ph 84.5 3.7 0.00013 37.9 8.7 30 139-168 247-279 (621)
70 2e6k_A Transketolase; structur 83.3 4.8 0.00016 37.4 9.0 100 60-169 123-246 (651)
71 2vbf_A Branched-chain alpha-ke 83.1 2.8 9.7E-05 37.9 7.2 101 58-168 428-546 (570)
72 3kom_A Transketolase; rossmann 83.1 3.3 0.00011 38.6 7.8 107 52-169 114-245 (663)
73 2wvg_A PDC, pyruvate decarboxy 83.0 2.1 7.1E-05 38.8 6.3 101 58-168 416-536 (568)
74 2pgn_A Cyclohexane-1,2-dione h 82.2 1.2 4.2E-05 40.6 4.5 112 47-168 414-542 (589)
75 2o1x_A 1-deoxy-D-xylulose-5-ph 82.0 4.7 0.00016 37.2 8.4 30 139-168 252-284 (629)
76 1r9j_A Transketolase; domains, 81.4 9.2 0.00031 35.7 10.1 86 74-169 150-246 (673)
77 1w85_A Pyruvate dehydrogenase 80.6 3.8 0.00013 35.4 6.8 102 59-170 146-264 (368)
78 2nxw_A Phenyl-3-pyruvate decar 78.9 2.4 8.2E-05 38.4 5.2 142 6-167 378-536 (565)
79 1itz_A Transketolase; calvin c 78.3 9.1 0.00031 35.7 9.0 100 60-169 132-257 (675)
80 2bfd_A 2-oxoisovalerate dehydr 77.0 4.6 0.00016 35.2 6.3 65 105-170 210-284 (400)
81 1gpu_A Transketolase; transfer 75.7 9.3 0.00032 35.6 8.3 100 60-169 121-246 (680)
82 2r8o_A Transketolase 1, TK 1; 75.1 9.5 0.00033 35.5 8.2 101 59-169 118-243 (669)
83 2vk8_A Pyruvate decarboxylase 74.1 2.6 8.7E-05 38.1 4.0 100 59-168 417-537 (563)
84 3rim_A Transketolase, TK; TPP, 72.5 8.5 0.00029 36.2 7.2 65 105-170 194-266 (700)
85 2ozl_A PDHE1-A type I, pyruvat 68.0 18 0.00062 31.0 7.9 63 105-169 188-259 (365)
86 1qs0_A 2-oxoisovalerate dehydr 66.7 11 0.00039 32.8 6.4 64 105-169 229-303 (407)
87 2c42_A Pyruvate-ferredoxin oxi 65.6 28 0.00095 34.9 9.5 39 130-168 1024-1065(1231)
88 1umd_A E1-alpha, 2-OXO acid de 61.7 12 0.00043 31.9 5.6 63 105-169 192-265 (367)
89 3mos_A Transketolase, TK; thia 56.5 18 0.00061 33.3 6.0 97 60-169 126-238 (616)
90 2jgd_A 2-oxoglutarate dehydrog 53.8 34 0.0012 33.2 7.6 109 51-170 318-453 (933)
91 4bby_A Alkyldihydroxyacetoneph 49.3 15 0.0005 34.1 4.2 38 132-170 200-237 (658)
92 3irs_A Uncharacterized protein 40.9 1.3E+02 0.0045 24.1 8.4 99 38-146 82-190 (291)
93 1hsk_A UDP-N-acetylenolpyruvoy 36.7 32 0.0011 28.8 4.1 30 141-170 51-80 (326)
94 3tx1_A UDP-N-acetylenolpyruvoy 34.9 38 0.0013 28.5 4.2 29 141-169 57-85 (322)
95 2qtc_A Pyruvate dehydrogenase 32.1 2E+02 0.0068 27.7 9.1 23 147-169 365-388 (886)
96 1uxy_A MURB, uridine diphospho 30.1 52 0.0018 27.8 4.3 29 141-169 17-45 (340)
97 3rja_A Carbohydrate oxidase; p 25.7 65 0.0022 28.4 4.3 31 140-170 38-68 (473)
98 3pm9_A Putative oxidoreductase 24.4 53 0.0018 29.1 3.4 30 141-170 54-83 (476)
99 2a6q_A Antitoxin YEFM; YEFM, a 24.2 45 0.0015 22.0 2.3 31 138-168 2-33 (86)
100 3fw9_A Reticuline oxidase; BI- 23.8 70 0.0024 28.5 4.1 31 140-170 47-77 (495)
101 2qas_A SSPB, hypothetical prot 23.7 84 0.0029 23.8 3.9 73 3-80 24-107 (157)
102 3pop_A GILR oxidase; FAD bindi 23.2 75 0.0026 28.3 4.2 34 136-170 33-66 (501)
103 2y3s_A TAML; oxidoreductase; H 21.6 85 0.0029 28.1 4.3 31 140-170 60-90 (530)
104 1wvf_A 4-cresol dehydrogenase 20.9 71 0.0024 28.4 3.6 30 140-169 58-87 (520)
105 2nys_A AGR_C_3712P; SSPB, stri 20.8 1.3E+02 0.0043 23.2 4.4 73 3-80 16-99 (176)
106 1e8g_A Vanillyl-alcohol oxidas 20.8 66 0.0023 29.0 3.4 36 134-170 67-102 (560)
107 1f0x_A DLDH, D-lactate dehydro 20.3 86 0.0029 28.5 4.0 31 140-170 47-77 (571)
108 2bvf_A 6-hydroxy-D-nicotine ox 20.2 76 0.0026 27.7 3.6 31 140-170 40-70 (459)
109 3kyj_B CHEY6 protein, putative 20.1 1.8E+02 0.0061 19.7 5.1 38 8-46 49-87 (145)
110 3i99_A UDP-N-acetylenolpyruvoy 20.1 51 0.0017 28.2 2.3 29 141-169 33-61 (357)
111 3tsh_A Pollen allergen PHL P 4 20.1 89 0.003 27.5 4.0 31 140-170 54-84 (500)
112 8abp_A L-arabinose-binding pro 20.0 1.5E+02 0.0052 23.1 5.2 40 130-169 50-89 (306)
No 1
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=100.00 E-value=9.4e-49 Score=340.88 Aligned_cols=204 Identities=38% Similarity=0.661 Sum_probs=185.2
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
+++|++++++|.+++++||+++++++|++.++|+++.+++|+++|||+||+|+||+|++|+++|+|+|++|++||+++++
T Consensus 3 ~~~~~a~~~~L~~l~~~~~~vv~~~~d~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~t~ 82 (324)
T 1w85_B 3 MTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQF 82 (324)
T ss_dssp ECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEBCSS
T ss_pred chHHHHHHHHHHHHHhHCcCEEEEcCcccccCCcchhHHHHHHHhCCCcEEEcchhHHHHHHHHHHHHhCCCEEEEEecc
Confidence 47999999999999999999999999998888998888999999977999999999999999999999999999999655
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR 160 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~ 160 (207)
..|++|++|||++++++++|+++|++++|++++.+.|....+++||+++++++++++|||+|++|+|+.|+++++++|++
T Consensus 83 ~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~l~V~~Psd~~e~~~~l~~a~~ 162 (324)
T 1w85_B 83 FGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIR 162 (324)
T ss_dssp GGGGGGTHHHHHTTGGGHHHHTTTSSCCCCEEEEEECSSSCCCTTSSCCCHHHHTTSTTCEEECCSSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhhhccCCCcCCEEEEEeccCCCCCCCcccccHHHHHccCCCCEEEeeCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999976555555678999999999999999999999999999999999999
Q ss_pred CCCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 161 DPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 161 ~~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
.++|++||+||.+++...+ .++++++.+++||++++++|+|++|
T Consensus 163 ~~~Pv~i~~p~~l~r~~~~---~~~~~~~~~~~Gk~~~~~~g~dv~i 206 (324)
T 1w85_B 163 DNDPVIFLEHLKLYRSFRQ---EVPEGEYTIPIGKADIKREGKDITI 206 (324)
T ss_dssp SSSCEEEEEETTTSSSCCE---ECCSSCCCCCTTCCEEEECCSSEEE
T ss_pred cCCCEEEEechHhcCCCCC---CCCCccccccCCceEEEecCCCEEE
Confidence 9999999999999875221 2345667799999999999999986
No 2
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=100.00 E-value=4.6e-49 Score=348.43 Aligned_cols=203 Identities=44% Similarity=0.687 Sum_probs=159.7
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEechh
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMTF 81 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~~ 81 (207)
++|++++++|.+++++|++++++++|++.++++|+.+.+|+++|||+||+|+||+|++|+++|+|||++|++||+++++.
T Consensus 52 ~~~~a~~~aL~~l~~~d~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rpv~~~tf~ 131 (369)
T 1ik6_A 52 NMAKAINMALHEEMERDERVVVLGEDVGKKGGVFLVTEGLYERFGPERVIDTPLNEGGILGFAMGMAMAGLKPVAEIQFV 131 (369)
T ss_dssp CHHHHHHHHHHHHHHHCTTEEEEEC---------CTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred cHHHHHHHHHHHHHccCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECcccHHHHHHHHHHHHHCCCeeEEEecch
Confidence 68999999999999999999999999988888887789999999889999999999999999999999999999996555
Q ss_pred hHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcC
Q psy10429 82 NFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRD 161 (207)
Q Consensus 82 ~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~ 161 (207)
.|++|++|||++++|+++|++||+.++||+++++.|+..++++||++.++++|+++|||+|++|+|+.|++.++++|++.
T Consensus 132 ~Fl~~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs~~~~a~l~~iPnl~V~~Psd~~e~~~ll~~A~~~ 211 (369)
T 1ik6_A 132 DFIWLGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSNSPEAIFVHTPGLVVVMPSTPYNAKGLLKAAIRG 211 (369)
T ss_dssp ----CCHHHHHHHHHHHHC------CCCCEEEEEECC-----------HHHHHHTCTTCEEECCCSHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccccccHHHHHcCCCCcEEEecCCHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999987776677789999999999999999999999999999999999999
Q ss_pred CCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 162 PDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 162 ~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
++|++||+||.+++...+ .++++++.+++||++++|+|+|++|
T Consensus 212 ~~Pv~i~~p~~l~r~~~~---~v~~~~~~~~~G~~~v~~~g~dv~I 254 (369)
T 1ik6_A 212 DDPVVFLEPKILYRAPRE---EVPEGDYVVEIGKARVAREGDDVTL 254 (369)
T ss_dssp SSCEEEEEEGGGSSCCCE---EEECSSCCCCTTCCEEEECCSSEEE
T ss_pred CCCEEEEEehhhhccCCC---CcCCCcccccCCceEEEEcCCCEEE
Confidence 999999999999976211 2334567799999999999999986
No 3
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=100.00 E-value=5e-49 Score=344.98 Aligned_cols=207 Identities=76% Similarity=1.251 Sum_probs=185.4
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
+++|++++++|.+++++|++++++++|++..+++|+.+++|+++|||+||+|+||+|++|+++|+|+|++|++||+++++
T Consensus 15 ~~~~~a~~~~L~~l~~~~~~vv~~~~D~~~~g~~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rp~~~~~f 94 (341)
T 2ozl_B 15 VTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMT 94 (341)
T ss_dssp EEHHHHHHHHHHHHHHHCTTEEEEETTSSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999999999998777877778999999988999999999999999999999999999999766
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR 160 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~ 160 (207)
.+|++|++|||+++++|++||+||++++||+++++.|...+.|++|||..+++++++|||+|++|+|+.|++.++++|++
T Consensus 95 ~~F~~~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~G~~g~~G~tHs~~~ea~l~~iP~l~V~~Psd~~e~~~~l~~a~~ 174 (341)
T 2ozl_B 95 FNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIR 174 (341)
T ss_dssp GGGGGGGHHHHHTTTTTHHHHTTSSCCCCCEEEEECSCCSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCEEEEEcCcCCCCCCcchhhHHHHHhccCCCCEEEEeCCHHHHHHHHHHHHh
Confidence 68889999999999999999999999999999998764434577777877799999999999999999999999999999
Q ss_pred CCCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 161 DPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 161 ~~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
.++|++||++|.+|+.+.++.+.++++++.+++||++++++|.|++|
T Consensus 175 ~~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~Gk~~v~~~g~dv~i 221 (341)
T 2ozl_B 175 DNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITV 221 (341)
T ss_dssp SSSCEEEEECHHHHTCEEECCHHHHSTTCCCCTTCCEEEECCSSEEE
T ss_pred cCCCEEEEEChhhhcCCCCcCCccCCccccccCCceEEeccCCCEEE
Confidence 99999999999988765444112345677899999999999999876
No 4
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=100.00 E-value=2.8e-48 Score=337.81 Aligned_cols=204 Identities=46% Similarity=0.684 Sum_probs=185.2
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
+++|++++++|.+++++|++++++++|++.++|+++.+++|+++|||+||+|+||+|++++++|+|+|++|++||+++++
T Consensus 4 ~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~~p~~~~t~ 83 (324)
T 1umd_B 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQF 83 (324)
T ss_dssp ECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CcHHHHHHHHHHHHHhcCCCEEEECCcccccCCcchhhHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEecc
Confidence 37999999999999999999999999998888888888999999977999999999999999999999999999999655
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR 160 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~ 160 (207)
..|++|++|||++++++++|++||++++|++++.+.|....+++||+++++++++++|||+|++|+|+.|++.++++|++
T Consensus 84 ~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~ 163 (324)
T 1umd_B 84 ADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIR 163 (324)
T ss_dssp GGGCGGGHHHHHHTTTTHHHHTTTSSCCCCEEEEEECSSSSCGGGSSCCCHHHHHTSTTCEEEECCSHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHhhcCCCCcCCEEEEEcCCCCCCCCCccchhHHHHHhcCCCCEEEEeCCHHHHHHHHHHHHh
Confidence 56689999999999999999999999999999987555555688999999999999999999999999999999999999
Q ss_pred CCCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 161 DPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 161 ~~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
.++|++||+||.+++...+ .++++++.+++||++++++|+|++|
T Consensus 164 ~~~Pv~i~~p~~l~~~~~~---~~~~~~~~~~~Gk~~~~~~g~dv~i 207 (324)
T 1umd_B 164 DEDPVVFLEPKRLYRSVKE---EVPEEDYTLPIGKAALRREGKDLTL 207 (324)
T ss_dssp CSSCEEEEEEGGGSSSCCE---ECCSSCCCCCTTCCEEEECCSSEEE
T ss_pred cCCCEEEEechHhcCCCCC---CcCCCCccccCCcceEEecCCCEEE
Confidence 9999999999999876321 3445667799999999999999986
No 5
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=100.00 E-value=6e-48 Score=337.47 Aligned_cols=207 Identities=38% Similarity=0.575 Sum_probs=186.3
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
+++|++++++|.+++++|++++++++|++.++|+|+.+++|+++|||+||+|+||+|++|+++|+|+|++|++||+++++
T Consensus 5 ~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gisE~~~~~~a~G~A~~G~rp~~~~t~ 84 (338)
T 1qs0_B 5 MTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQF 84 (338)
T ss_dssp CCHHHHHHHHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEECSC
T ss_pred chHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEEccccHHHHHHHHHHHHhCCCEEEEEecc
Confidence 47999999999999999999999999998888888888999999988999999999999999999999999999998655
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR 160 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~ 160 (207)
..|++|++|||++++|+++|++||+.++||+++++.|+...+++||+++|+++||++|||+|+.|+|+.|++.++++|++
T Consensus 85 ~~F~~~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g~~~G~th~s~~d~~~l~~iP~l~V~~Psd~~e~~~~l~~A~~ 164 (338)
T 1qs0_B 85 ADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIE 164 (338)
T ss_dssp GGGCGGGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSCCSSSSCCCHHHHTTSTTCEEECCCSHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCCCCCCcccccccHHHHHhcCCCCEEEeeCCHHHHHHHHHHHHh
Confidence 56789999999999999999999999999999998766555678999999999999999999999999999999999999
Q ss_pred CCCcEEEEECcccccccCC---CCc----------ccCCCCccccCCceEEEEeCCceec
Q psy10429 161 DPDPVVFLENELLYGVQYP---MGD----------EALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 161 ~~~P~~i~~~k~l~~~~~~---~~~----------~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
.++|++||+||.+++...+ ..+ .++++++.+++||++++|+|+|++|
T Consensus 165 ~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~i 224 (338)
T 1qs0_B 165 CDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSV 224 (338)
T ss_dssp SSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEECCSSCEE
T ss_pred cCCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCceeEecCCCCEEE
Confidence 9999999999999876322 000 2344567789999999999999886
No 6
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=100.00 E-value=1.3e-47 Score=336.16 Aligned_cols=203 Identities=35% Similarity=0.617 Sum_probs=184.2
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
+++|++++++|.+++++||+++++++|++ .+|+|+.+.+|+++|||+||+|+||+|++|+++|+|+|++|++||+++++
T Consensus 21 ~~~~~a~~~aL~~l~~~~~~vv~~~~D~~-~~gt~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~tf 99 (342)
T 2bfd_B 21 MNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQF 99 (342)
T ss_dssp ECHHHHHHHHHHHHHHHCTTCEEEETTTT-TTCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCccC-CCcccchHHHHHHHhCCCeEEEcCcCHHHHHHHHHHHHHCCCeeEEEecc
Confidence 36999999999999999999999999998 67788888999999988999999999999999999999999999998655
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccC-CEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHH
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNV-PIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAI 159 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~-pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~ 159 (207)
..|++|++|||++++++++||++|+.++ ||+++++.|+...+++||+++|++++|++|||+|++|+|+.|++.++++|+
T Consensus 100 ~~F~~~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~~~G~th~~~~d~~~l~~iP~l~V~~Psd~~e~~~~l~~a~ 179 (342)
T 2bfd_B 100 ADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCI 179 (342)
T ss_dssp GGGCGGGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCSSCGGGSSCCCHHHHHTSTTCEEECCSSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCCCCCcchhhHhHHHHHhcCCCcEEEeeCCHHHHHHHHHHHH
Confidence 5678899999999999999999999999 999998865544567899999999999999999999999999999999999
Q ss_pred cCCCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 160 RDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 160 ~~~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
+.++|++||+||.++|...+ .++.+++.+++||++++++|+|++|
T Consensus 180 ~~~~Pv~i~~p~~l~r~~~~---~~~~~~~~~~~G~~~v~~~g~dv~i 224 (342)
T 2bfd_B 180 EDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTL 224 (342)
T ss_dssp HSSSCEEEEEEGGGTTSCCE---EEESSCCCCCSSCCEEEECCSSEEE
T ss_pred hcCCcEEEEecchhcCCCCC---CCCCcccceeCCceEEeccCCCEEE
Confidence 99999999999999876422 3445667899999999999999986
No 7
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=100.00 E-value=1.2e-37 Score=291.73 Aligned_cols=187 Identities=20% Similarity=0.217 Sum_probs=161.9
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
.+|+++|+++|.+++++|++++++++|+.. ++ + +.+|+++| |+||+|+||+|++|+++|+|+|++|++||+++++
T Consensus 322 ~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~--~~-~-~~~f~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~~~ 396 (629)
T 2o1x_A 322 YSWSAAFGEAVTEWAKTDPRTFVVTPAMRE--GS-G-LVEFSRVH-PHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIYS 396 (629)
T ss_dssp CBHHHHHHHHHHHHHHHCTTEEEEESSCTT--TT-T-CHHHHHHC-GGGEEECCSCHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred HHHHHHHHHHHHHHhhhCcCEEEEeccccC--Cc-C-hHHHHHhc-CcceEeccccHHHHHHHHHHHHHcCCEEEEEecH
Confidence 479999999999999999999999999853 32 3 37899999 7999999999999999999999999999999977
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHH
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAA 158 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a 158 (207)
.|++||+|||++++| ++++||++++..|+..| +.+||+.+++++||++|||+|++|+|+.|+++++++|
T Consensus 397 -~F~~~a~dqi~~~~a--------~~~~pvv~~~~~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~a 467 (629)
T 2o1x_A 397 -TFLQRAYDQVLHDVA--------IEHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYA 467 (629)
T ss_dssp -HHHGGGHHHHHHTTT--------TTTCCCEEEEESBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh--------hcCCCEEEEEECCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHHH
Confidence 568899999999999 67999999997644344 3457777889999999999999999999999999999
Q ss_pred HcCCCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 159 IRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 159 ~~~~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
++.++|++||++|..+.. ++ . ++.+.+++||++++|+|+|+||
T Consensus 468 ~~~~~Pv~i~~~r~~~~~---~~--~-~~~~~~~~G~~~~~~~g~dv~i 510 (629)
T 2o1x_A 468 QTHDGPFAIRYPRGNTAQ---VP--A-GTWPDLKWGEWERLKGGDDVVI 510 (629)
T ss_dssp HHSSSCEEEECCSSBCCC---CC--T-TCCCCCCTTCCEEEECCSSEEE
T ss_pred HhCCCCEEEEecCCCCCC---Cc--c-cccccccCCceEEEeeCCCEEE
Confidence 999999999998654421 11 1 3456789999999999999986
No 8
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.9e-37 Score=288.89 Aligned_cols=187 Identities=18% Similarity=0.258 Sum_probs=161.1
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCCccEEEech
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMT 80 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~ 80 (207)
.+|+++|+++|.+++++|++++++++|+.. ++ + +.+|+++| |+||+|+||+|++|+++|+|+|++|++||+++++
T Consensus 319 ~~~~~~~~~~l~~~~~~d~~v~~~~~d~~~--~~-~-~~~~~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~~~ 393 (621)
T 2o1s_A 319 PSYSKIFGDWLCETAAKDNKLMAITPAMRE--GS-G-MVEFSRKF-PDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYS 393 (621)
T ss_dssp CBHHHHHHHHHHHHHHHCTTEEEEESSCTT--TT-T-CHHHHHHC-TTTEEECCSCHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHHHHHHhhCcCEEEEeCcccC--Cc-C-hHHHHHhC-CCceEecCcCHHHHHHHHHHHHHCCCEEEEEehH
Confidence 379999999999999999999999999853 32 3 37899999 7999999999999999999999999999999977
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCC-CC-CCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHH
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASG-VA-AQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAA 158 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g-~~-~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a 158 (207)
.|++||+|||++++| ++++||+++++.++..| .+ +||..+++++||++|||+|+.|+|+.|+++++++|
T Consensus 394 -~F~~~a~dqi~~~~a--------~~~~pvv~~~~~~g~~g~~G~tH~~~~d~~~~~~iP~l~v~~P~d~~e~~~~l~~a 464 (621)
T 2o1s_A 394 -TFLQRAYDQVLHDVA--------IQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTG 464 (621)
T ss_dssp -TGGGGGHHHHHHTTT--------TTTCCCEEEEESCBCCCTTCGGGCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHH--------hcCCCEEEEEECCccCCCCCCccCchHHHHHHhcCCCCEEEecCCHHHHHHHHHHH
Confidence 467899999999999 68999999998655444 34 46666788999999999999999999999999999
Q ss_pred HcC-CCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCceec
Q psy10429 159 IRD-PDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIMKTL 207 (207)
Q Consensus 159 ~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~dvti 207 (207)
++. ++|++||++|..+.. .+ +.+ ++.+++||++++|+|+|+||
T Consensus 465 ~~~~~~Pv~i~~~r~~~~~-~~----~~~-~~~~~~G~~~~~~~g~dv~i 508 (621)
T 2o1s_A 465 YHYNDGPSAVRYPRGNAVG-VE----LTP-LEKLPIGKGIVKRRGEKLAI 508 (621)
T ss_dssp HHCCSSCEEEECCSSBCCC-CC----CCC-CCCCCTTCCEEEECCSSEEE
T ss_pred HHcCCCCEEEEeCCCCCCC-CC----CCc-cccccCCceEEeecCCCEEE
Confidence 998 999999998765532 11 112 26789999999999999986
No 9
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=100.00 E-value=5e-37 Score=288.67 Aligned_cols=187 Identities=17% Similarity=0.161 Sum_probs=156.5
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCccCCc-hhhchhhh-hhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEe
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGA-YKVSRGLW-KKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEF 78 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~-~~~~~~l~-~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~ 78 (207)
++|+|++++|.++++++|+++++++|++.++++ ++.+.+|. ++| |+||+|+||+|++|+++|+|||+. |++||+++
T Consensus 356 a~r~a~~~aL~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~~d~GIaE~~~v~~a~GlA~~gG~~P~~~t 434 (663)
T 3kom_A 356 ATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSGSVWLNNTQE-GANYLSYGVREFGMAAIMNGLSLYGGIKPYGGT 434 (663)
T ss_dssp EHHHHHHHHHHHHHHHCTTEEEEECCC--CCSCCCTTCCBTTTCST-TCCEEECCSCHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEecccCCCCCcccccccccccccC-CCCeEecCccHHHHHHHHHHHHHcCCCEEEEEe
Confidence 689999999999999999999999999877765 45667885 999 699999999999999999999999 99999999
Q ss_pred chhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe-CCCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHH
Q psy10429 79 MTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG-PNGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLL 155 (207)
Q Consensus 79 ~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~-~~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll 155 (207)
|+ .|+.++++|||+ ++ ++++||++++ .+|...| +.+||+++++++||++|||+|++|+|+.|++.++
T Consensus 435 f~-~F~~~~~~~ir~-~a--------~~~lpvv~~~t~~g~g~G~dG~THq~~ed~a~lr~iPnl~V~~Pad~~e~~~~l 504 (663)
T 3kom_A 435 FL-VFSDYSRNAIRM-SA--------LMKQPVVHVMSHDSIGLGEDGPTHQPIEHVPSLRLIPNLSVWRPADTIETMIAW 504 (663)
T ss_dssp EG-GGHHHHHHHHHH-HH--------HTTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCCSHHHHHHHH
T ss_pred hH-HHHHHHHHHHHH-HH--------hcCCCEEEEEeCCccccCCCCCCcCCHHHHHHHhcCCCcEEEeeCCHHHHHHHH
Confidence 77 567899999984 66 6899999996 4454444 5679999999999999999999999999999999
Q ss_pred HHHHc-CCCcEEEEECcccccccCCCCcccCCCC---ccccCCceEEEEe--CCceec
Q psy10429 156 KAAIR-DPDPVVFLENELLYGVQYPMGDEALSKD---FVLPIGKAKVEKQ--VIMKTL 207 (207)
Q Consensus 156 ~~a~~-~~~P~~i~~~k~l~~~~~~~~~~~~~~~---~~~~~Gka~v~r~--G~dvti 207 (207)
++|++ .++|+|||.+|. +++ .++.++ +.++.|+ .++|+ |+||||
T Consensus 505 ~~A~~~~~~Pv~ir~~r~------~~p-~~~~~~~~~~~~~~G~-~vl~~~~g~dvti 554 (663)
T 3kom_A 505 KEAVKSKDTPSVMVLTRQ------NLM-PVVQTQHQVANIARGG-YLVKDNPDAKLTI 554 (663)
T ss_dssp HHHHHCSSCCEEEECCSS------EEC-CCCCCHHHHHHHTTTC-EEEECCTTCSCEE
T ss_pred HHHHHhCCCCEEEEccCc------cCC-CcCccccchhcccCce-EEEEecCCCCEEE
Confidence 99999 799999997632 222 233232 3577884 67787 899986
No 10
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=100.00 E-value=6.7e-37 Score=286.39 Aligned_cols=184 Identities=14% Similarity=0.042 Sum_probs=154.4
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEech
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMT 80 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~ 80 (207)
.+|+++.++|.++++.+|+++++++|++.++.+. ..+.++|+|+||||+||+||+|+++|+|||+. |++||+++|+
T Consensus 339 a~r~a~~~~l~~l~~~~p~~v~~~aDl~~s~~~~---~~~~~~f~p~R~~d~GIaE~~~v~~a~GlA~~gG~~P~~~~f~ 415 (632)
T 3l84_A 339 ATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTE---LHSMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSATFF 415 (632)
T ss_dssp CHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCC---CTTSCBTTTSSEEECCSCHHHHHHHHHHHHHHSSCEEEEEEEG
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEecccCCccCcc---hhcccccCCCCeEEeCccHHHHHHHHHHHHHcCCCEEEEEecH
Confidence 5799999999999999999999999997555431 12346897799999999999999999999999 9999999977
Q ss_pred hhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHH
Q psy10429 81 FNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKA 157 (207)
Q Consensus 81 ~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~ 157 (207)
.|+.++++|||+ ++ ++++||++++. +|...| +.+||+++++++||+||||+|++|+|+.|+++++++
T Consensus 416 -~F~~~~~~~ir~-~a--------~~~~pv~~~~t~~g~g~G~dG~THq~~ed~a~lr~iP~l~V~~P~d~~e~~~~l~~ 485 (632)
T 3l84_A 416 -IFSEYLKPAARI-AA--------LMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQI 485 (632)
T ss_dssp -GGHHHHHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCGGGSCSSHHHHHHHSSSCEEECCSSHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH-Hh--------ccCCCEEEEEECCCcCCCCCCCCCCCHhHHHHHhcCCCCEEEecCCHHHHHHHHHH
Confidence 557899999984 67 67999999974 454444 557999999999999999999999999999999999
Q ss_pred HHcCCCcEEEEECcccccccCCCCcccCCC-CccccCCce-EEEEe--CCceec
Q psy10429 158 AIRDPDPVVFLENELLYGVQYPMGDEALSK-DFVLPIGKA-KVEKQ--VIMKTL 207 (207)
Q Consensus 158 a~~~~~P~~i~~~k~l~~~~~~~~~~~~~~-~~~~~~Gka-~v~r~--G~dvti 207 (207)
|++.++|+|||++|... ++.+ ++..+++|+ +|+|+ |+||||
T Consensus 486 A~~~~~Pv~ir~~r~~~---------~~~~~~~~~~~~~g~~vl~~~~g~dvti 530 (632)
T 3l84_A 486 ALNADIPSAFVLSRQKL---------KALNEPVFGDVKNGAYLLKESKEAKFTL 530 (632)
T ss_dssp HHHCSSCEEEECCSSCB---------CCCCCCSBCCGGGSSEEEECCTTCSEEE
T ss_pred HHhCCCCEEEEEcCCCC---------CCCccccccccccccEEEEecCCCCEEE
Confidence 99999999999764211 1222 244677776 89999 899986
No 11
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=100.00 E-value=7.4e-37 Score=289.06 Aligned_cols=187 Identities=16% Similarity=0.152 Sum_probs=157.6
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCccCCch-hhchhhhhh---cCC---CceeeccchhHHHHHHHHHHHhc-CCc
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGAY-KVSRGLWKK---YGD---KRVLDTPITEIGFAGIAVGAAMA-GLR 73 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~-~~~~~l~~~---~g~---~r~~~~gIaE~~~vg~A~GlA~~-G~~ 73 (207)
++|+|++++|.++++++|+++++++|++.+++++ +.+.+|+++ | | +||||+||+||+|+++|+|||+. |++
T Consensus 396 atR~A~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~-p~~~~R~~d~GIaE~~mv~~AaGlA~~~G~~ 474 (711)
T 3uk1_A 396 ATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANADGP-GVQWGNHINYGVREFGMSAAINGLVLHGGYK 474 (711)
T ss_dssp EHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCEECSSSS-SEECCSEEECCSCHHHHHHHHHHHHHHSSCE
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEeccccCcCCcccccchhhhhhhccC-CCCCCcEEEeCccHHHHHHHHHHHHHcCCCE
Confidence 5899999999999999999999999998766653 345689888 9 6 99999999999999999999995 999
Q ss_pred cEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHH
Q psy10429 74 PVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSED 150 (207)
Q Consensus 74 pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e 150 (207)
||+++|+ .|+.++++|||+ ++ ++++||++++. +|...| +.+||+++++++||+||||+|++|+|+.|
T Consensus 475 Pv~~~f~-~F~~~~~~~ir~-~a--------~~~lpv~~v~thdg~gvG~dG~THq~~ed~a~lr~iPnl~V~~Pad~~E 544 (711)
T 3uk1_A 475 PFGGTFL-TFSDYSRNALRV-AA--------LMKVPSIFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVE 544 (711)
T ss_dssp EEEEEEG-GGHHHHHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHH
T ss_pred EEEEEhH-HHHHHHHHHHHH-hh--------hcCCCEEEEEECCCcCcCCCCCccCChhHHHHHhcCCCCEEEecCCHHH
Confidence 9999977 568899999985 66 67999999985 344334 56799999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcEEEEECcccccccCCCCcccCCCC---ccccCCceEEEEe--C----Cceec
Q psy10429 151 AKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKD---FVLPIGKAKVEKQ--V----IMKTL 207 (207)
Q Consensus 151 ~~~ll~~a~~~~~P~~i~~~k~l~~~~~~~~~~~~~~~---~~~~~Gka~v~r~--G----~dvti 207 (207)
+++++++|++.++|+|||++|. +++ .++.++ +.+++|++ ++|+ | +||||
T Consensus 545 ~~~~l~~Ai~~~~Pv~ir~~r~------~~p-~~~~~~~~~~~i~~G~~-vl~~~~G~~~~~dvti 602 (711)
T 3uk1_A 545 TAVAWTYAVAHQHPSCLIFSRQ------NLA-FNARTDAQLANVEKGGY-VLRDWDEEIVARKIIL 602 (711)
T ss_dssp HHHHHHHHHHSSSCEEEECCSS------EEC-CCCCCHHHHHHGGGSSE-EEECCCSSCCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeeCC------CCC-CCCCccccccccCCCeE-EEEecCCCCCCCCEEE
Confidence 9999999999999999997642 222 222332 57889985 6674 8 79986
No 12
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=100.00 E-value=4e-37 Score=290.18 Aligned_cols=186 Identities=13% Similarity=0.126 Sum_probs=155.8
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCccCCch-hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEec
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGAY-KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFM 79 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~-~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~ 79 (207)
++|++++++|.++++++|+++++++|++.+++++ +.+++|+++|+|+||||+||+||+|+++|+|||+. |++||+++|
T Consensus 380 a~R~a~g~~L~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~R~~d~GIaE~~mv~~A~GlA~~gG~~P~~~tf 459 (690)
T 3m49_A 380 ATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMNGIALHGGLKTYGGTF 459 (690)
T ss_dssp EHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTSCBCBTTBTTCCEEECCSCHHHHHHHHHHHHHHSSCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEeCcccccCCccccccccchhhcCCCceEEcCchHHHHHHHHHHHHHcCCCEEEEEec
Confidence 6899999999999999999999999998777664 56789999988999999999999999999999999 999999987
Q ss_pred hh--hHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCC-CCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHH
Q psy10429 80 TF--NFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGA-ASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGL 154 (207)
Q Consensus 80 ~~--~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~-~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~l 154 (207)
.. +|+++ ||| +++ ++++||++++..++ ..| +.+||+++++++||+||||+|++|+|+.|++++
T Consensus 460 ~~Fs~f~~~---air-~~a--------l~~lpVv~v~~~~gigvG~dG~THq~ied~a~lr~iPnl~V~~Pad~~E~~~~ 527 (690)
T 3m49_A 460 FVFSDYLRP---AIR-LAA--------LMQLPVTYVFTHDSIAVGEDGPTHEPIEQLAALRAMPNVSVIRPADGNESVAA 527 (690)
T ss_dssp GGGGGGGHH---HHH-HHH--------HHTCCCEEEEECCSGGGCTTCGGGCCSSHHHHHHTSTTCEEECCSSHHHHHHH
T ss_pred HHHHHHHHH---HHH-HHH--------hcCCCcEEEEECCCcCCCCCCCccCCHHHHHHHhcCCCCEEEeeCCHHHHHHH
Confidence 54 44454 566 466 67999999987533 244 457999999999999999999999999999999
Q ss_pred HHHHHcC-CCcEEEEECcccccccCCCCcccCCC----CccccCCceEEEEeCC----ceec
Q psy10429 155 LKAAIRD-PDPVVFLENELLYGVQYPMGDEALSK----DFVLPIGKAKVEKQVI----MKTL 207 (207)
Q Consensus 155 l~~a~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~----~~~~~~Gka~v~r~G~----dvti 207 (207)
+++|++. ++|++||++|.-. + .++.+ .+.+++|+ .|+|+|+ ||||
T Consensus 528 l~~Ai~~~~~Pv~ir~~R~~~------p-~~~~~~~~~~~~~~~G~-~vlr~g~~g~~dvti 581 (690)
T 3m49_A 528 WRLALESTNKPTALVLTRQDL------P-TLEGAKDDTYEKVAKGA-YVVSASKKETADVIL 581 (690)
T ss_dssp HHHHHHCSSSCEEEECCSSEE------E-CCHHHHTTHHHHHHTSC-EEEECCSSSSCSEEE
T ss_pred HHHHHHcCCCCEEEEeecccC------C-CCCccccccccccCCCe-EEEEecCCCCCCEEE
Confidence 9999998 7999999774322 1 12122 25789998 7899986 8986
No 13
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.6e-36 Score=293.17 Aligned_cols=198 Identities=20% Similarity=0.225 Sum_probs=169.3
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCc--------------cCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHH
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVAL--------------YDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGA 67 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~--------------~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~Gl 67 (207)
+|..+...+|.+++++|++|+++|+|++. .+++|..+.+|.++|||+||+|+||+|++++|+|+|+
T Consensus 592 dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d~~~g~~~~~l~~l~~~~gp~rv~ds~IaE~~~vg~a~G~ 671 (933)
T 2jgd_A 592 DWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGY 671 (933)
T ss_dssp CHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEECSSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhcccccCCceeechHHHHHHcCCCeEEECCcCHHHHHHHHHHH
Confidence 46778899999999999999999999975 3566677889999998899999999999999999999
Q ss_pred HhcCCc--cEEEechhhHHH---HHHHHHHHHH-hhhhhhccCCccCCEEEEeCCCCCCCCCCCCchhHhHHHcCC--CC
Q psy10429 68 AMAGLR--PVCEFMTFNFSM---QAIDHIINSA-AKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQCFGAWFTQC--PG 139 (207)
Q Consensus 68 A~~G~~--pi~~~~~~~~~~---ra~dqi~~~~-a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~~~a~~~~i--Pg 139 (207)
|++|++ |+++.++.+|+. |+||||++++ +|+ .+++||+++++.|....+..|||+.++++++.+ ||
T Consensus 672 A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~------~~~~~vv~~l~~G~~g~G~~Hss~~~E~~l~~~~~pn 745 (933)
T 2jgd_A 672 ATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKW------GRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQN 745 (933)
T ss_dssp HHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHH------CCCCCCEEEEECCCSSSCTTSSCCCHHHHHHTCCTTC
T ss_pred HhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHH------ccCCCEEEEEeCCCCCCCcccccchHHHHHHHhCCCC
Confidence 999998 999988888887 9999999988 765 568999999998765445678888899888755 99
Q ss_pred cEEEeeCCHHHHHHHHHHH-HcC-CCcEEEEECcccccccCCCCc--ccCCCCccccCCceEEEEeCCcee
Q psy10429 140 LKVVSPYNSEDAKGLLKAA-IRD-PDPVVFLENELLYGVQYPMGD--EALSKDFVLPIGKAKVEKQVIMKT 206 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a-~~~-~~P~~i~~~k~l~~~~~~~~~--~~~~~~~~~~~Gka~v~r~G~dvt 206 (207)
|+|+.|+||.|+++||+++ ++. ++|++||+||.++|.+..++. .+++.++.+++||+++++ |+|||
T Consensus 746 m~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~~~~~f~~~ig~~~~~~-g~dV~ 815 (933)
T 2jgd_A 746 MQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELD-PKGVK 815 (933)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHHHHCCCCSEECCCSCCC-GGGCC
T ss_pred eEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCccccCCCceeecCCcceEee-cCcce
Confidence 9999999999999999998 475 899999999999987654431 122356778999999888 99985
No 14
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=100.00 E-value=4e-36 Score=280.85 Aligned_cols=185 Identities=21% Similarity=0.221 Sum_probs=156.9
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhcCC-ccEEEec
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMAGL-RPVCEFM 79 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~-~pi~~~~ 79 (207)
+++|++++++|.+++++||+++++++|++. ++ .+..|+++| |+||+|+||+|++|+++|+|||++|. +|++.++
T Consensus 313 ~a~r~a~~~~L~~l~~~d~~vv~~~aD~~~--~~--~~~~~~~~~-p~R~~d~gIaE~~~v~~a~G~A~~G~~~~~~~~f 387 (616)
T 3mos_A 313 IATRKAYGQALAKLGHASDRIIALDGDTKN--ST--FSEIFKKEH-PDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTF 387 (616)
T ss_dssp CCHHHHHHHHHHHHHHHCTTEEEEESSCHH--HH--SHHHHHHHC-GGGEEECCSCHHHHHHHHHHHHGGGCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEeCCcCC--Cc--chhhHHHhC-CCCeEEcCccHHHHHHHHHHHHHcCCCCEEEEeh
Confidence 368999999999999999999999999963 33 358999999 69999999999999999999999998 6777777
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHH
Q psy10429 80 TFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLK 156 (207)
Q Consensus 80 ~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~ 156 (207)
+ .|++|++|||++. + .+++||++++.. |...| +.+||+++++++|+++|||+|++|+|+.|++.+++
T Consensus 388 ~-~Fl~~a~dqi~~~-a--------~~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a~l~~iP~l~V~~P~d~~e~~~~l~ 457 (616)
T 3mos_A 388 A-AFFTRAFDQIRMA-A--------ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVE 457 (616)
T ss_dssp G-GGGGGGHHHHHHH-H--------HTTCCEEEEEESBSGGGCTTCGGGCBSSHHHHHHTSTTEEEECCCSHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHH-H--------HhCCCeEEEEECCCccccCCCCcccCHHHHHHhcCCCCCEEEecCCHHHHHHHHH
Confidence 7 5678999999975 5 457888888764 44344 35799999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEECcccccccCCCCcccCCCCccccCCceEEEEeCCc--eec
Q psy10429 157 AAIRDPDPVVFLENELLYGVQYPMGDEALSKDFVLPIGKAKVEKQVIM--KTL 207 (207)
Q Consensus 157 ~a~~~~~P~~i~~~k~l~~~~~~~~~~~~~~~~~~~~Gka~v~r~G~d--vti 207 (207)
++++.++|+++|.++ . +.+ .++..++.+++||++++|+|+| +||
T Consensus 458 ~a~~~~gp~~ir~~r----~--~~p-~~~~~~~~~~~Gka~vl~eg~d~dv~i 503 (616)
T 3mos_A 458 LAANTKGICFIRTSR----P--ENA-IIYNNNEDFQVGQAKVVLKSKDDQVTV 503 (616)
T ss_dssp HHHTCCSEEEEECCS----S--CCB-CCSCTTCCCCTTCCEEEECCSSEEEEE
T ss_pred HHHhcCCCEEEEEeC----C--CCC-ccCCCcccccCCeEEEEEeCCCCCEEE
Confidence 999999999998653 2 222 3455667889999999999988 875
No 15
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-36 Score=287.20 Aligned_cols=188 Identities=13% Similarity=0.047 Sum_probs=158.3
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCccCCch-hhchhhhhhc------CC---CceeeccchhHHHHHHHHHHHhc-
Q psy10429 2 TVRDALNSALDEEMARDEKVFLLGEEVALYDGAY-KVSRGLWKKY------GD---KRVLDTPITEIGFAGIAVGAAMA- 70 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~-~~~~~l~~~~------g~---~r~~~~gIaE~~~vg~A~GlA~~- 70 (207)
++|++++++|.+++++||+++++++|++.+++++ +.+.+|+++| |. +||||+||+||+|+++|+|||+.
T Consensus 376 atr~a~~~~L~~l~~~~p~vv~~saDl~~s~~t~~~~~~~f~~~~~~~~~~p~~~~~R~id~GIaE~~mv~~A~GlA~~g 455 (700)
T 3rim_A 376 ATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHAMGAILSGIVLHG 455 (700)
T ss_dssp EHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEESCGGGCCSSCCEETTCCEEECCSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEeCCccCCCCcccccchhhcccccccccCCcccCCceeecCccHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999998776653 3457899998 54 69999999999999999999999
Q ss_pred CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCC
Q psy10429 71 GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYN 147 (207)
Q Consensus 71 G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~ 147 (207)
|++||+++|..| +.++++|||. ++ ++++||++++. +|...| +.+||+++++++||+||||+|++|+|
T Consensus 456 G~~Pv~~tF~~F-~d~~~~~ir~-~a--------l~~lpvv~v~thdg~gvG~dG~THq~ied~a~lr~iPnl~V~~Pad 525 (700)
T 3rim_A 456 PTRAYGGTFLQF-SDYMRPAVRL-AA--------LMDIDTIYVWTHDSIGLGEDGPTHQPIEHLSALRAIPRLSVVRPAD 525 (700)
T ss_dssp SCEEEEEEEGGG-GGGGHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCTTTSCSSHHHHHHTSTTCEEECCSS
T ss_pred CCEEEEEecHHH-HHHHHHHHHH-hc--------CCCCCEEEEEeCCCcccCCCCCccCChhHHHHHhcCCCCEEEeCCC
Confidence 999999988754 5667888884 67 67999999985 444344 56799999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC---CcEEEEECcccccccCCCCcccCCC-CccccCCceEEEEeCC--------ceec
Q psy10429 148 SEDAKGLLKAAIRDP---DPVVFLENELLYGVQYPMGDEALSK-DFVLPIGKAKVEKQVI--------MKTL 207 (207)
Q Consensus 148 ~~e~~~ll~~a~~~~---~P~~i~~~k~l~~~~~~~~~~~~~~-~~~~~~Gka~v~r~G~--------dvti 207 (207)
+.|+++++++|++++ +|++||.+|.- ++ .++.+ .+.+++|+ +|+|+|+ ||||
T Consensus 526 ~~e~~~~l~~Ai~~~~~~~Pv~ir~~r~~------~~-~~~~~~~~~~~~G~-~vlr~g~~~~~~~~~dvti 589 (700)
T 3rim_A 526 ANETAYAWRTILARRNGSGPVGLILTRQG------VP-VLDGTDAEGVARGG-YVLSDAGGLQPGEEPDVIL 589 (700)
T ss_dssp HHHHHHHHHHHHTTTTCSSCEEEECCSSE------EC-CCTTCCHHHHHHSC-EEEECCSCCCTTCCCSEEE
T ss_pred HHHHHHHHHHHHHccCCCCCEEEEecccc------CC-CcCcccccccCCCc-EEEecCCccccCCCCCEEE
Confidence 999999999999986 59999977422 22 23333 47799998 7999997 8986
No 16
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=7.5e-36 Score=281.73 Aligned_cols=188 Identities=14% Similarity=0.139 Sum_probs=157.7
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCch-hhchhhhh------hcCCCceeeccchhHHHHHHHHHHHhcC-C
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAY-KVSRGLWK------KYGDKRVLDTPITEIGFAGIAVGAAMAG-L 72 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~-~~~~~l~~------~~g~~r~~~~gIaE~~~vg~A~GlA~~G-~ 72 (207)
+++|++++++|.++++++|+++++++|++.+++++ +-+..|++ +| |+||||+||+|++|+++|+|||+.| +
T Consensus 356 ~a~r~a~~~~L~~~~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~~~~~~-p~R~~d~gIaE~~~vg~a~GlA~~Gg~ 434 (680)
T 1gpu_A 356 VATRKLSETVLEDVYNQLPELIGGSADLTPSNLTRWKEALDFQPPSSGSGNY-SGRYIRYGIREHAMGAIMNGISAFGAN 434 (680)
T ss_dssp BCHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEECCTTTSSEET-TCCEEECCSCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEecccccccccccccccccccccccccCC-CCceecCCccHHHHHHHHHHHHhcCCC
Confidence 36899999999999999999999999998777654 11245777 99 7999999999999999999999998 9
Q ss_pred c-cEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCH
Q psy10429 73 R-PVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNS 148 (207)
Q Consensus 73 ~-pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~ 148 (207)
+ ||+.+|+.| +.++++|||+ ++ ++++||++++. +|...| +.+||+.+++++||+||||+|++|+|+
T Consensus 435 ~~P~~~~f~~F-~~~~~~air~-~a--------~~~lpvv~v~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~ 504 (680)
T 1gpu_A 435 YKPYGGTFLNF-VSYAAGAVRL-SA--------LSGHPVIWVATHDSIGVGEDGPTHQPIETLAHFRSLPNIQVWRPADG 504 (680)
T ss_dssp CEEEEEEEHHH-HGGGHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSSSCEEECCCSH
T ss_pred ceEEEeehHHH-HHHHHHHHHH-HH--------hcCCCEEEEEeCCccccCCCCCccCCHHHHHHhcCCCCCEEEecCCH
Confidence 9 999998754 5689999986 67 67999999975 454444 456889999999999999999999999
Q ss_pred HHHHHHHHHHHcC-CCcEEEEECcccccccCCCCcccCCCCcc-ccCCceEEEEeC--Cceec
Q psy10429 149 EDAKGLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDFV-LPIGKAKVEKQV--IMKTL 207 (207)
Q Consensus 149 ~e~~~ll~~a~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~~~~-~~~Gka~v~r~G--~dvti 207 (207)
.|+++++++|++. ++|+|||++|. +.+ .++.+++. +++| ++|+|+| +||||
T Consensus 505 ~e~~~~l~~A~~~~~~Pv~i~~~r~------~~~-~~~~~~~~~~~~G-~~vl~~g~~~dvti 559 (680)
T 1gpu_A 505 NEVSAAYKNSLESKHTPSIIALSRQ------NLP-QLEGSSIESASKG-GYVLQDVANPDIIL 559 (680)
T ss_dssp HHHHHHHHHHHHCSSCCEEEECCSS------CBC-CCTTCCHHHHTTS-CEEEECCSSCSEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEEecCC------CCC-CCCCcchhhccCC-CEEEecCCCCCEEE
Confidence 9999999999998 99999998753 222 23334455 8898 5899998 89986
No 17
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=100.00 E-value=2.1e-35 Score=278.29 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=159.6
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCch-hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEe
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAY-KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEF 78 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~-~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~ 78 (207)
+++|++++++|.++++++|+++++++|++.+++++ +.+.+|+++| |+||+|+||+|++|+++|+|||+. |++||+.+
T Consensus 355 ~~~r~a~~~~L~~l~~~~p~v~~~~aDl~~s~~~~~~~~~~f~~~~-p~R~id~GIaE~~~v~~a~GlA~~gG~~P~~~t 433 (669)
T 2r8o_A 355 IASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDA-AGNYIHYGVREFGMTAIANGISLHGGFLPYTST 433 (669)
T ss_dssp EEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCCCTTCCBTTTCT-TCSEEECCSCHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEecCcccccccccccccccccccC-CCCeeecchhHHHHHHHHHHHHHcCCCeEEEee
Confidence 36899999999999999999999999998777765 4457899999 799999999999999999999999 89999998
Q ss_pred chhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHH
Q psy10429 79 MTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLL 155 (207)
Q Consensus 79 ~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll 155 (207)
|+.| +.++++|||+ ++ ++++||+++++. |...| +.+||+.+++++||++|||+|++|+|+.|++.++
T Consensus 434 f~~F-~~~~~~~ir~-~a--------~~~lpvv~~~t~~g~~~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~~~~l 503 (669)
T 2r8o_A 434 FLMF-VEYARNAVRM-AA--------LMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAW 503 (669)
T ss_dssp EGGG-GGTTHHHHHH-HH--------HTTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHHHHHH
T ss_pred hHHH-HHHHHHHHHH-HH--------hcCCCEEEEEeCCCcCcCCCCCccCCHHHHHHhcCCCCCEEEecCCHHHHHHHH
Confidence 8855 5599999996 66 679999999863 44444 4568889999999999999999999999999999
Q ss_pred HHHHcC-CCcEEEEECcccccccCCCCcccCCCCc---cccCCceEEEEe--C-Cceec
Q psy10429 156 KAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF---VLPIGKAKVEKQ--V-IMKTL 207 (207)
Q Consensus 156 ~~a~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~~~---~~~~Gka~v~r~--G-~dvti 207 (207)
++|++. ++|+|||++|..+. .++.+++ .+++| +.++|+ | +||||
T Consensus 504 ~~a~~~~~~Pv~i~~~r~~~~-------~~~~~~~~~~~~~~G-~~vl~~~~g~~dv~i 554 (669)
T 2r8o_A 504 KYGVERQDGPTALILSRQNLA-------QQERTEEQLANIARG-GYVLKDCAGQPELIF 554 (669)
T ss_dssp HHHHHCSSSCEEEECCSSEEC-------CCCCCHHHHHHGGGS-CEEEECCSSSCSEEE
T ss_pred HHHHHhCCCcEEEEeCCCCCC-------CCCCccchhhhccCC-CEEEeccCCCCCEEE
Confidence 999998 99999998865442 2222322 37888 478898 8 89986
No 18
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.5e-35 Score=284.78 Aligned_cols=189 Identities=16% Similarity=0.163 Sum_probs=158.5
Q ss_pred HHHhcCCcEEEEecCCCcc--------------CCchhhchhh------hhhcCCCceeeccchhHHHHHHHHHHHhcCC
Q psy10429 13 EEMARDEKVFLLGEEVALY--------------DGAYKVSRGL------WKKYGDKRVLDTPITEIGFAGIAVGAAMAGL 72 (207)
Q Consensus 13 ~~~~~~~~vv~~~~D~~~~--------------~g~~~~~~~l------~~~~g~~r~~~~gIaE~~~vg~A~GlA~~G~ 72 (207)
+++.++++|+++|+|++.. +|+|..+.+| .++++|+||+|+||+|++++|+|+|||++|+
T Consensus 529 ~l~~~~~~V~~~G~Dv~~~Tfs~rh~v~~d~~~g~~~~~~~~l~~~~~~~~~~~p~Rv~ds~IsE~~~vG~a~G~A~~G~ 608 (868)
T 2yic_A 529 SLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNP 608 (868)
T ss_dssp HHHHTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCT
T ss_pred HHHhcCCCEEEEcCcCCccchhhcchhccccCCCceecchhhhcccccchhhcCCcEEEECCccHHHHHHHHHHHHccCC
Confidence 6699999999999999863 7788889999 7766689999999999999999999999994
Q ss_pred --ccEEEechhhHHHHH---HHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchh-HhHHH--cCCCCcEEEe
Q psy10429 73 --RPVCEFMTFNFSMQA---IDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQC-FGAWF--TQCPGLKVVS 144 (207)
Q Consensus 73 --~pi~~~~~~~~~~ra---~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~-~~a~~--~~iPgl~v~~ 144 (207)
+|+++.+|.+|+.+| +||+++++ .++|+ +++||+++++.|+ .|.|++||+. +++++ +++|||+|++
T Consensus 609 ~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~---~~k~~--~~~~vvi~~p~G~-~G~Gp~Hs~~~~E~~l~l~~~pnm~V~~ 682 (868)
T 2yic_A 609 DAMVLWEAQFGDFVNGAQSIIDEFISSG---EAKWG--QLSDVVLLLPHGH-EGQGPDHTSGRIERFLQLWAEGSMTIAM 682 (868)
T ss_dssp TSEEEEECSSGGGGGGGHHHHHHTTTTH---HHHHC--CCCCCEEEEECCC-SSSCTTSSCCCHHHHHHHCCTTSCEEEC
T ss_pred CCceEEEEehHHHHhhHHHHHHHHHHHH---HHHhC--CCCCEEEEecCCC-CCCChhhcCCcHHHHHhcCCCCCCEEEE
Confidence 678899999999988 99999776 34554 3899999999877 5667777765 77777 9999999999
Q ss_pred eCCHHHHHHHHHHHHcCC--CcEEEEECcccccccCCCCccc-C-CCCccccCCceEE---EEeCCce--ec
Q psy10429 145 PYNSEDAKGLLKAAIRDP--DPVVFLENELLYGVQYPMGDEA-L-SKDFVLPIGKAKV---EKQVIMK--TL 207 (207)
Q Consensus 145 P~~~~e~~~ll~~a~~~~--~P~~i~~~k~l~~~~~~~~~~~-~-~~~~~~~~Gka~v---~r~G~dv--ti 207 (207)
|+||.|+++||++++..+ +|+||++||.|||.+.+++... + +..+..++||+++ +++|+|| ||
T Consensus 683 Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk~llR~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~I 754 (868)
T 2yic_A 683 PSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLL 754 (868)
T ss_dssp CCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTSCBCHHHHHSCCCCSEECCHHHHTSSCCGGGCCEEE
T ss_pred eCCHHHHHHHHHHHHhcCCCCcEEEEechHHhCCCCCCCCccccCCCCceecCCcceeecccccCCceeEEE
Confidence 999999999999988765 9999999999998876543210 1 1234448999998 8899999 65
No 19
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=2.4e-34 Score=271.33 Aligned_cols=188 Identities=12% Similarity=0.116 Sum_probs=157.3
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchh-hchhhhh-hcCCCceeeccchhHHHHHHHHHHHhcC--CccEE
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYK-VSRGLWK-KYGDKRVLDTPITEIGFAGIAVGAAMAG--LRPVC 76 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~-~~~~l~~-~~g~~r~~~~gIaE~~~vg~A~GlA~~G--~~pi~ 76 (207)
+++|++++++|.++++++|+++++++|++.++++.. .+..|++ +| |+||+|+||+|++|+++|+|||+.| ++||+
T Consensus 366 ~a~r~a~~~~L~~i~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~-~~R~id~gIaE~~~v~~a~GlA~~G~~~~P~~ 444 (675)
T 1itz_A 366 DATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTA-EERNVRFGVREHGMGAICNGIALHSPGFVPYC 444 (675)
T ss_dssp BCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCCTTCT-TCCBCCCCSCHHHHHHHHHHHHTTCTTCEEEE
T ss_pred hHHHHHHHHHHHHHHHhCCCEEEEeccccccccccccccccccccCC-CCCeEeecccHHHHHHHHHHHHhcCCCCEEEE
Confidence 368999999999999999999999999987665531 1234886 99 7999999999999999999999999 99999
Q ss_pred EechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHH
Q psy10429 77 EFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKG 153 (207)
Q Consensus 77 ~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ 153 (207)
++|+.| +.++++||++ ++ ++++||++++. +|...| +.+||+.+++++||+||||+|++|+|++|++.
T Consensus 445 ~t~~~F-~~~~~~~ir~-~a--------~~~lpvv~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~e~~~ 514 (675)
T 1itz_A 445 ATFFVF-TDYMRGAMRI-SA--------LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNETAG 514 (675)
T ss_dssp EEEGGG-HHHHHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHSSSSCEEECCCSHHHHHH
T ss_pred EEHHHH-HHHHHHHHHH-HH--------hcCCCEEEEEECCccccCCCCCCcCcHHHHHHhccCCCeEEEECCCHHHHHH
Confidence 998754 5689999986 66 67999999984 444444 45688899999999999999999999999999
Q ss_pred HHHHHHcC-CCcEEEEECcccccccCCCCcccCCCCc-cccCCceEEEEe---C--Cceec
Q psy10429 154 LLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF-VLPIGKAKVEKQ---V--IMKTL 207 (207)
Q Consensus 154 ll~~a~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~~~-~~~~Gka~v~r~---G--~dvti 207 (207)
++++|++. ++|+|||++|. +.+ .++.+++ .+++| ++++|+ | .||||
T Consensus 515 ~l~~a~~~~~~Pv~i~~~r~------~~p-~~~~~~~~~~~~G-a~vl~~~~~G~~~dv~i 567 (675)
T 1itz_A 515 AYKVAVLNRKRPSILALSRQ------KLP-HLPGTSIEGVEKG-GYTISDNSTGNKPDLIV 567 (675)
T ss_dssp HHHHHHHCTTSCEEEEECSS------CBC-CCTTCCHHHHTTS-SEEEEECCSTTCCSEEE
T ss_pred HHHHHHHhCCCcEEEEecCC------CCC-CCCCccccccccC-CEEEecccCCCCCCEEE
Confidence 99999998 99999998752 222 2333444 58999 789998 8 89986
No 20
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=1.2e-34 Score=273.33 Aligned_cols=188 Identities=13% Similarity=0.117 Sum_probs=157.7
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchh-h--chhhhh-hcCCCceeeccchhHHHHHHHHHHHhc-CCccE
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYK-V--SRGLWK-KYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPV 75 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~-~--~~~l~~-~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi 75 (207)
+++|++++++|.++++++|+++++++|++.+++++. - +..|++ +| |+||+|+||+|++|+++|+|||+. |++||
T Consensus 352 ~a~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~~~f~~~~~-~~R~id~GIaE~~~~~~a~GlA~~GG~~P~ 430 (673)
T 1r9j_A 352 IATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASANLVDFSSSSK-EGRYIRFGVREHAMCAILNGLDAHDGIIPF 430 (673)
T ss_dssp EEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCSCGGGCCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSCEEE
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEeccccccccccccCcccccccccCC-CCCeEecCccHHHHHHHHHHHHhcCCCEEE
Confidence 368999999999999999999999999987776641 0 244887 99 799999999999999999999999 69999
Q ss_pred EEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHH
Q psy10429 76 CEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAK 152 (207)
Q Consensus 76 ~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~ 152 (207)
+++|+.| +.++++||++ ++ ++++||++++. +|...| +.+||+.++++++|+||||+|+.|+|+.|++
T Consensus 431 ~~~~~~F-~~~~~~~ir~-~a--------~~~~pvv~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~e~~ 500 (673)
T 1r9j_A 431 GGTFLNF-IGYALGAVRL-AA--------ISHHRVIYVATHDSIGVGEDGPTHQPVELVAALRAMPNLQVIRPSDQTETS 500 (673)
T ss_dssp EEEEGGG-GGGGHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHHSTTCEEECCSSHHHHH
T ss_pred EEehHHH-HHHHHHHHHH-HH--------hcCCCEEEEEECCccCcCCCCcccCCHHHHHHHcCCCCCEEEeCCCHHHHH
Confidence 9998755 5589999986 67 67999999974 444444 4568888999999999999999999999999
Q ss_pred HHHHHHHcC-CCcEEEEECcccccccCCCCcccCCCCc-cccCCceEEEEeC--Cceec
Q psy10429 153 GLLKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF-VLPIGKAKVEKQV--IMKTL 207 (207)
Q Consensus 153 ~ll~~a~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~~~-~~~~Gka~v~r~G--~dvti 207 (207)
.++++|++. ++|+|||++|.-+ + .++.+++ .+++| +.|+|+| .||||
T Consensus 501 ~~l~~a~~~~~~Pv~i~~~r~~~----~---~~~~~~~~~~~~G-a~vl~~g~~~dv~l 551 (673)
T 1r9j_A 501 GAWAVALSSIHTPTVLCLSRQNT----E---PQSGSSIEGVRHG-AYSVVDVPDLQLVI 551 (673)
T ss_dssp HHHHHHHHCTTCCEEEECCSSEE----C---CCTTCCHHHHHTS-CEEEECCTTCSEEE
T ss_pred HHHHHHHHhCCCeEEEEEcCCCC----C---CCCCcccccccCC-CEEEeeCCCCCEEE
Confidence 999999997 9999999875322 1 2333444 58999 7899999 89986
No 21
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-34 Score=270.26 Aligned_cols=188 Identities=18% Similarity=0.089 Sum_probs=156.7
Q ss_pred CcHHHHHHHHHHHHHhcCCcEEEEecCCCccCCchh-hchhhhh-hcCCCceeeccchhHHHHHHHHHHHhcC-CccEEE
Q psy10429 1 MTVRDALNSALDEEMARDEKVFLLGEEVALYDGAYK-VSRGLWK-KYGDKRVLDTPITEIGFAGIAVGAAMAG-LRPVCE 77 (207)
Q Consensus 1 ~~~~~a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~-~~~~l~~-~~g~~r~~~~gIaE~~~vg~A~GlA~~G-~~pi~~ 77 (207)
+++|++++++|.++++++|+++++++|++.+++++. .+.+|++ +| |+||+|+||+|++|+++|+|||+.| ++||++
T Consensus 349 ~~~r~a~~~~L~~~~~~~p~~~~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~i~~gIaE~~~~~~a~GlA~~Gg~~P~~~ 427 (651)
T 2e6k_A 349 IATRAASGRALNLLAPRLPELLGGSADLTPSNNTKAEGMEDFSRANP-LGRYLHFGVREHAMGAILNGLNLHGGYRAYGG 427 (651)
T ss_dssp BCHHHHHHHHHHHHGGGCTTEEEEESSCHHHHTCSCTTCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSCEEEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEEeCccccccccccccccccCccCC-CCceEecCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 368999999999999999999999999987766542 4567987 99 7999999999999999999999998 999999
Q ss_pred echhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe-CCCCCCC--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHH
Q psy10429 78 FMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG-PNGAASG--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGL 154 (207)
Q Consensus 78 ~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~-~~G~~~g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~l 154 (207)
++.+|. .++++|||. ++ ++++||++++ .+|...| +.+||+.++++++|++|||+|++|+|+.|++.+
T Consensus 428 t~~~F~-~~~~~air~-~a--------~~~lpvv~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~~~~ 497 (651)
T 2e6k_A 428 TFLVFS-DYMRPAIRL-AA--------LMGVPTVFVFTHDSIALGEDGPTHQPVEHLMSLRAMPNLFVIRPADAYETFYA 497 (651)
T ss_dssp EEGGGG-GGSHHHHHH-HH--------HHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHHHHH
T ss_pred eHHHHH-HHHHHHHHH-HH--------hcCCCEEEEEECCccccCCCcCccccHHHHHHhcCCCCcEEEecCCHHHHHHH
Confidence 998654 477888875 66 6799999996 4454444 456888889999999999999999999999999
Q ss_pred HHHHHcC-CCcEEEEECcccccccCCCCcccCCCCc-cccCCceEEEEeC--Cceec
Q psy10429 155 LKAAIRD-PDPVVFLENELLYGVQYPMGDEALSKDF-VLPIGKAKVEKQV--IMKTL 207 (207)
Q Consensus 155 l~~a~~~-~~P~~i~~~k~l~~~~~~~~~~~~~~~~-~~~~Gka~v~r~G--~dvti 207 (207)
+++|++. ++|+|||++|..+. .++.+++ .++.| +.++++| .||||
T Consensus 498 l~~A~~~~~~Pv~i~~~r~~~~-------~~~~~~~~~~~~G-~~vl~~g~~~dv~i 546 (651)
T 2e6k_A 498 WLVALRRKEGPTALVLTRQAVP-------LLSPEKARGLLRG-GYVLEDVEEPQGVL 546 (651)
T ss_dssp HHHHHHCCSSCEEEECCSSCBC-------CCCHHHHGGGGGS-SEEEECCSSCSEEE
T ss_pred HHHHHHcCCCCEEEEEeCCCCC-------CCCcchhhhhcCC-CEEEeeCCCCCEEE
Confidence 9999998 89999998864331 2222223 47788 5889998 88886
No 22
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.6e-34 Score=283.42 Aligned_cols=191 Identities=17% Similarity=0.173 Sum_probs=159.9
Q ss_pred HHHHHhcCCcEEEEecCCCcc--------------CCchhhchhh------hhhcCCCceeeccchhHHHHHHHHHHHhc
Q psy10429 11 LDEEMARDEKVFLLGEEVALY--------------DGAYKVSRGL------WKKYGDKRVLDTPITEIGFAGIAVGAAMA 70 (207)
Q Consensus 11 L~~~~~~~~~vv~~~~D~~~~--------------~g~~~~~~~l------~~~~g~~r~~~~gIaE~~~vg~A~GlA~~ 70 (207)
..+++.++++|+++|+|++.. +++|..+.+| .++++|+||+|+||+|++++|+|+|||+.
T Consensus 772 ~~~ll~~~~~V~l~GeDv~rgtfs~rh~v~~d~~~g~~~~~l~~l~~~~~~~~~~~p~rv~ds~IsE~~~vg~a~G~A~~ 851 (1113)
T 2xt6_A 772 LGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVG 851 (1113)
T ss_dssp HHHHHHTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcccCCCccchhcchheecccCCceecchhccccccccchhcCCcEEEECCCCHHHHHHHHHHHHhc
Confidence 445699999999999999752 6778888999 77676899999999999999999999999
Q ss_pred C--CccEEEechhhHHHHH---HHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCCCCCCchh-HhHHH--cCCCCcEE
Q psy10429 71 G--LRPVCEFMTFNFSMQA---IDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGVAAQHSQC-FGAWF--TQCPGLKV 142 (207)
Q Consensus 71 G--~~pi~~~~~~~~~~ra---~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~~~hhs~~-~~a~~--~~iPgl~v 142 (207)
| .+|+++.++.+|+.+| +||+++++ +++|+ +++||+++.+.|+ .|.|++||+. +++++ +++|||+|
T Consensus 852 G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~---~~k~~--~~~~vv~~lp~G~-~G~G~~Hs~~~~E~~l~l~~~pnm~V 925 (1113)
T 2xt6_A 852 NPDAMVLWEAQFGDFVNGAQSIIDEFISSG---EAKWG--QLSDVVLLLPHGH-EGQGPDHTSGRIERFLQLWAEGSMTI 925 (1113)
T ss_dssp CTTSEEEEECSSGGGGGGGHHHHHHTTTTH---HHHHC--CCCCCEEEEECCC-SSSCTTSSCCCHHHHHHHCCTTSCEE
T ss_pred CCCCceEEEEEEHHHHhhhHHHHHHHHHHH---HHHhC--CCCCEEEEeCCCC-CCCChhhhcccHHHHHhcCCCCCcEE
Confidence 9 5678899999999888 99999876 34564 3899999999877 5677777765 88888 99999999
Q ss_pred EeeCCHHHHHHHHHHHHcCC--CcEEEEECcccccccCCCCccc-CC-CCccccCCceEE---EEeCCce--ec
Q psy10429 143 VSPYNSEDAKGLLKAAIRDP--DPVVFLENELLYGVQYPMGDEA-LS-KDFVLPIGKAKV---EKQVIMK--TL 207 (207)
Q Consensus 143 ~~P~~~~e~~~ll~~a~~~~--~P~~i~~~k~l~~~~~~~~~~~-~~-~~~~~~~Gka~v---~r~G~dv--ti 207 (207)
++|+||.|+++||++++..+ +|++|++||.|||.+.+++... +. ..+..++||+++ +++|+|| ||
T Consensus 926 ~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk~L~R~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~i 999 (1113)
T 2xt6_A 926 AMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLL 999 (1113)
T ss_dssp ECCSSHHHHHHHHHHHHHSSCCCCEEEEECSGGGSCSSSCBCHHHHHSCCCCSEECCHHHHTSCCCSTTCCEEE
T ss_pred EecCCHHHHHHHHHHHHhccCCCCEEEEechHHhCCCCCCCcccccCCCCccccCCcceeeccccCccccCEEE
Confidence 99999999999999988764 9999999999998876543210 11 134448999998 8999999 65
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.96 E-value=2.9e-28 Score=234.74 Aligned_cols=192 Identities=10% Similarity=0.045 Sum_probs=148.4
Q ss_pred cHHHHHHHHHHHHHhcC---CcEEEEecCCCc-cCC-----chhh----chhhh-----------hhcCCCceeeccchh
Q psy10429 2 TVRDALNSALDEEMARD---EKVFLLGEEVAL-YDG-----AYKV----SRGLW-----------KKYGDKRVLDTPITE 57 (207)
Q Consensus 2 ~~~~a~~~~L~~~~~~~---~~vv~~~~D~~~-~~g-----~~~~----~~~l~-----------~~~g~~r~~~~gIaE 57 (207)
++|+++.++|.++++++ +++|.+++|++. .|+ +.++ ...|. +.| |+||+|+||+|
T Consensus 493 atr~afg~~L~~l~~~~~~~~~iV~i~pd~~~~~G~~dl~~S~~i~~~~~~~f~~~d~~~~~~~~e~~-~~R~~d~GIaE 571 (886)
T 2qtc_A 493 STTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDE-KGQILQEGINE 571 (886)
T ss_dssp CHHHHHHHHHHHHTTCTTTTTTEEEEESSCSGGGTCHHHHHHHCBBCC-----------------CBT-TCCBEECCSCH
T ss_pred hHHHHHHHHHHHHHhhcccCCcEEEEcCccccccCcccccccccccccCCcccccccchhhhhhhhcC-CCceeeeccCc
Confidence 68999999999999998 999999999652 221 1111 12343 677 79999999999
Q ss_pred HHH-H---HHHHHHHhcC--CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC-C-CCC-CCCch
Q psy10429 58 IGF-A---GIAVGAAMAG--LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA-S-GVA-AQHSQ 128 (207)
Q Consensus 58 ~~~-v---g~A~GlA~~G--~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~-~-g~~-~hhs~ 128 (207)
+++ + |+|+|||+.| ++||+.+++.|.++||+|||+++++ +++.++++.+..+.. . +.| +||+.
T Consensus 572 ~~a~~~~~g~a~GlA~~G~~~~P~~~~ys~F~~qRa~Dqi~~~~d--------~~~~~v~l~~~~~~~~~g~dG~tHq~~ 643 (886)
T 2qtc_A 572 LGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGD--------QQARGFLIGGTSGRTTLNGEGLQHEDG 643 (886)
T ss_dssp HHHHHHHHHHHTHHHHTSCCCEEEEEEEGGGSHHHHHHHHHHHHH--------TTCCCEEEEESCSTTTSTTTCTTTCCS
T ss_pred hhhhhHHHHHHHHHHhcCCCceEEEEEehHHHHHHHHHHHHHHHH--------HhcCCEEEEEecCcccCCCCCCccCCc
Confidence 994 6 7999999999 8999988887768999999999998 678898887764332 2 334 56666
Q ss_pred hHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcC-CCc----EEEEECcccccccCCCC-cccCCCC-ccccCCceEEEEe
Q psy10429 129 CFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRD-PDP----VVFLENELLYGVQYPMG-DEALSKD-FVLPIGKAKVEKQ 201 (207)
Q Consensus 129 ~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~-~~P----~~i~~~k~l~~~~~~~~-~~~~~~~-~~~~~Gka~v~r~ 201 (207)
+++++++++|||+|+.|+|+.|++.++++|++. ++| ++++.++.. .+.. +.++++. +.+ +|+++++|+
T Consensus 644 ~~~a~lr~iPnl~V~~Pada~E~~~~l~~al~~~~gP~~e~v~i~~~r~~----~~~~~p~~~~~~~~~~-~gga~vlr~ 718 (886)
T 2qtc_A 644 HSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLN----ENYHMPAMPEGAEEGI-RKGIYKLET 718 (886)
T ss_dssp CHHHHHTTSTTEEEECCSSHHHHHHHHHHHHHHHHSTTCCCCEEEEECCS----CCBCCCCCCTTCHHHH-HHTCEEEEE
T ss_pred chHHHHhhCCCCEEEecCCHHHHHHHHHHHHHhcCCCCCceEEEEEeCCc----cccCCCCCCcchhhhc-cCceEEEEe
Confidence 999999999999999999999999999999997 779 999987532 1110 1222222 345 899999999
Q ss_pred C----Cceec
Q psy10429 202 V----IMKTL 207 (207)
Q Consensus 202 G----~dvti 207 (207)
| +||||
T Consensus 719 g~~~~~dVtL 728 (886)
T 2qtc_A 719 IEGSKGKVQL 728 (886)
T ss_dssp ECCSSEEEEE
T ss_pred cCCCCCCEEE
Confidence 8 78886
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.91 E-value=7.6e-24 Score=201.84 Aligned_cols=190 Identities=7% Similarity=0.018 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHhcCCc-EEEEecCCCccCCchhhchhhhhh---------cC-C--------CceeeccchhHHHHHHH
Q psy10429 4 RDALNSALDEEMARDEK-VFLLGEEVALYDGAYKVSRGLWKK---------YG-D--------KRVLDTPITEIGFAGIA 64 (207)
Q Consensus 4 ~~a~~~~L~~~~~~~~~-vv~~~~D~~~~~g~~~~~~~l~~~---------~g-~--------~r~~~~gIaE~~~vg~A 64 (207)
+++++++|.++++++|+ ++++++|+..++.+ ..|.+. ++ | +||++ ||+|++|+|++
T Consensus 432 tra~g~~L~~l~~~~p~~~vv~sADl~~Sn~t----~~f~~~t~~~~~~~~~~~P~d~~~~~~GR~i~-GI~Eh~M~gia 506 (845)
T 3ahc_A 432 PRALGAYCRDIIKNNPDSFRIFGPDETASNRL----NATYEVTDKQWDNGYLSGLVDEHMAVTGQVTE-QLSEHQCEGFL 506 (845)
T ss_dssp HHHHHHHHHHHHHHSTTTEEEEESSCTTTTTC----GGGGGTCCEECCSCCCCTTTCCSEESSCSEEE-CSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEecCCCccccH----HHHHhhcccccccccccCCcccccCCCCcEee-eecHHHHHHHH
Confidence 56788999999999999 99999999866654 333333 41 3 89999 99999999999
Q ss_pred HHHHhcCCccEEEechhhHH--HHHHHH----HHHHHhhhhhhccCCccCCEEEEeCC-CCCCC--CCCCCchhHh--HH
Q psy10429 65 VGAAMAGLRPVCEFMTFNFS--MQAIDH----IINSAAKTFYMSAGTVNVPIVFRGPN-GAASG--VAAQHSQCFG--AW 133 (207)
Q Consensus 65 ~GlA~~G~~pi~~~~~~~~~--~ra~dq----i~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~g--~~~hhs~~~~--a~ 133 (207)
+|||+.|..||+.++.+|+. .|+++| ||+.++.+.||.. ..++++++.. |...| +.+||..+++ ..
T Consensus 507 ~Glal~G~~~f~~t~atFl~~~~~a~~q~akwiR~a~a~~~wr~~---~~~v~~v~Th~si~~GeDGpTHQ~~e~~d~l~ 583 (845)
T 3ahc_A 507 EAYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVREIPWRKP---ISSVNLLVSSHVWRQDHNGFSHQDPGVTSLLI 583 (845)
T ss_dssp HHHHHTTCEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHCTTSCC---CBCEEEEEESCGGGCTTTCGGGCCCTHHHHHG
T ss_pred HHHHhcCCCCceecchhhhchhhhHHHHHHHHHHhhHHhhhhccc---CCceEEEEeCCceeecCCCCCCCCcHHHHHHH
Confidence 99999999999999987766 999999 9988565544332 2257777653 44444 3458874444 44
Q ss_pred Hc---CCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEEECcccccccCCCCcccCCCCc---cccCCceEEE---Ee--C
Q psy10429 134 FT---QCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLENELLYGVQYPMGDEALSKDF---VLPIGKAKVE---KQ--V 202 (207)
Q Consensus 134 ~~---~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~k~l~~~~~~~~~~~~~~~~---~~~~Gka~v~---r~--G 202 (207)
++ .+|||+|+.|+|+.|+..+++.|+++++|+++|.- - |.+.| ++++.+. .+..|++.++ ++ |
T Consensus 584 ~~r~~~iPn~~V~~PaDanet~~a~~~al~~~~~~~v~v~---s--Rq~~p-~~~~~~~a~~~~~~G~~v~~~as~d~~g 657 (845)
T 3ahc_A 584 NKTFNNDHVTNIYFATDANMLLAISEKCFKSTNKINAIFA---G--KQPAP-TWVTLDEARAELEAGAAEWKWASNAENN 657 (845)
T ss_dssp GGCCTTCCCEEEEECCSHHHHHHHHHHHHHCBSCEEEEEC---C--CSCEE-ECSCHHHHHHHHHHSEEECTTTCCCSST
T ss_pred HhhccCCCCeEEEeCCCHHHHHHHHHHHHHcCCCeEEEEe---c--CCCCC-ccCCchhhhhhhcCCeEEEEeecccccC
Confidence 44 77999999999999999999999999888877641 1 22333 3444443 4778988887 56 6
Q ss_pred --Cceec
Q psy10429 203 --IMKTL 207 (207)
Q Consensus 203 --~dvti 207 (207)
.||+|
T Consensus 658 ~~~DVvL 664 (845)
T 3ahc_A 658 DEVQVVL 664 (845)
T ss_dssp TTCSEEE
T ss_pred CCCCEEE
Confidence 78875
No 25
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.45 E-value=1.8e-13 Score=121.58 Aligned_cols=123 Identities=20% Similarity=0.224 Sum_probs=86.7
Q ss_pred hcCCCceeeccchhHHHHHHHHHHHhcCCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCC--
Q psy10429 44 KYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASG-- 121 (207)
Q Consensus 44 ~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g-- 121 (207)
+++ .+|+.+. +|++++++|.|+|+.|.||++++.+++|. +++|||.+ ++ ..++|++++.+.++..+
T Consensus 62 ~~g-~~~i~~e-~E~~a~~~a~Gaa~aG~r~~~~ts~~G~~-~~~d~l~~-aa--------~~~~P~Vi~~~~~~~~~~g 129 (395)
T 1yd7_A 62 LVD-GVVIQME-DEIASIAAAIGASWAGAKAMTATSGPGFS-LMQENIGY-AV--------MTETPVVIVDVQRSGPSTG 129 (395)
T ss_dssp GGT-CEEEECS-CHHHHHHHHHHHHHTTCCEEEEEETTHHH-HHTTTCC-------------CCCCEEEEEEC-------
T ss_pred hcC-cEEEEeC-CHHHHHHHHHHHHHhCCcEEEEeCchHHH-HHHHHHHH-HH--------hcCCCEEEEEeeCCCCCCC
Confidence 674 7899988 99999999999999999999999998765 59999974 44 57999999987655433
Q ss_pred --CCCCCchhHhHHHcCCC--CcEEEeeCCHHHHHHHHHHHH----cCCCcEEEEECcccccccC
Q psy10429 122 --VAAQHSQCFGAWFTQCP--GLKVVSPYNSEDAKGLLKAAI----RDPDPVVFLENELLYGVQY 178 (207)
Q Consensus 122 --~~~hhs~~~~a~~~~iP--gl~v~~P~~~~e~~~ll~~a~----~~~~P~~i~~~k~l~~~~~ 178 (207)
...+|++...+++.+.| ++.++.|++++|++.++.+|+ +.+.||++++++.+++.+.
T Consensus 130 ~~~~~~~sd~~~~~~~~~g~~g~~vl~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~~l~h~~~ 194 (395)
T 1yd7_A 130 QPTLPAQGDIMQAIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAEVGHMRE 194 (395)
T ss_dssp -------------------CCCCEEECCCSHHHHHHHHHHHHHHHHHHTSEEEEEECHHHHHCEE
T ss_pred CCcccchhHHHHHHhccCCCcceEEEeCCCHHHHHHHHHHHHHHHHHHCCCEEEEcchhHhCeec
Confidence 23466666677888877 999999999999999999998 5689999999998776654
No 26
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=98.88 E-value=1.4e-08 Score=101.21 Aligned_cols=120 Identities=17% Similarity=0.178 Sum_probs=91.9
Q ss_pred hcCCCceeeccchhHHHHHHHHHHHhcCCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCC--C
Q psy10429 44 KYGDKRVLDTPITEIGFAGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS--G 121 (207)
Q Consensus 44 ~~g~~r~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~--g 121 (207)
.||..++++...+|..+++++.|+|++|.|+++.+.++.+. ...|.|. . +++ ..+|+||+.+.++.+ |
T Consensus 50 ~~G~~~~v~~~esE~aA~~aaiGAa~aGaR~~t~Ts~~Gl~-lm~e~l~-~------~ag--~~~P~Vi~va~R~g~~~g 119 (1231)
T 2c42_A 50 IFGQTLTIREMQSEAGAAGAVHGALAAGALTTTFTASQGLL-LMIPNMY-K------ISG--ELLPGVFHVTARAIAAHA 119 (1231)
T ss_dssp TTSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHH-HHHHHHH-H------HHH--TTCCCEEEEEECCCCSSS
T ss_pred hcCCceEEEecCChHHHHHHHHHHHHcCChHhhhccHHHHH-HHHHHHH-H------HhC--CCCCEEEEECCCCccCCC
Confidence 47767899999999999999999999999999998776543 3445543 2 333 378999998764443 2
Q ss_pred CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHH----HcCCCcEEEEECcccc
Q psy10429 122 VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAA----IRDPDPVVFLENELLY 174 (207)
Q Consensus 122 ~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a----~~~~~P~~i~~~k~l~ 174 (207)
.+.+-.|++. +....+|+.|++|+|++|++.++..| .+...||+++.+..++
T Consensus 120 lsi~~~hsd~-~~ar~~G~~vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~ 175 (1231)
T 2c42_A 120 LSIFGDHQDI-YAARQTGFAMLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT 175 (1231)
T ss_dssp BCCSCCSHHH-HTTTTSSCEEEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT
T ss_pred CcCCCchhhH-HHHhcCCcEEEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Confidence 2322233332 56788999999999999999998887 6679999999987655
No 27
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=96.07 E-value=0.048 Score=51.15 Aligned_cols=149 Identities=16% Similarity=0.108 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccc--hhHHHHHHHHHHHhcC-CccEEEechh-
Q psy10429 6 ALNSALDEEMARDEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPI--TEIGFAGIAVGAAMAG-LRPVCEFMTF- 81 (207)
Q Consensus 6 a~~~~L~~~~~~~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gI--aE~~~vg~A~GlA~~G-~~pi~~~~~~- 81 (207)
.+...|.+.+...++-++++.|.+... .+ ...-+.-.. |.+|+..|. +=-..++.|+|+|+.. -++++.+..-
T Consensus 465 ~v~~~L~~~l~~~~~~~iv~~~vg~~~-~~-~~~~~~~~~-p~~~~~sg~~G~mG~~lpaAiGaalA~p~~~Vv~i~GDG 541 (677)
T 1t9b_A 465 TVIKKLSKVANDTGRHVIVTTGVGQHQ-MW-AAQHWTWRN-PHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDIDGDA 541 (677)
T ss_dssp HHHHHHHHHHHTTCSCEEEEECSSHHH-HH-HHHHSCCCS-TTCEECCCSSCCTTCHHHHHHHHHHHCTTSEEEEEEEHH
T ss_pred HHHHHHHHHhhcCCCCEEEEeCCchHH-HH-HHHhcccCC-CCeEEeCCCcchhhchHHHHHHHHHhCCCCeEEEEEeeh
Confidence 455666776654234444556653110 11 011122233 567887765 2233678888888763 2555555532
Q ss_pred hHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC----------CC---CC-CCchhHhHHHcCCCCcEEEeeC
Q psy10429 82 NFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS----------GV---AA-QHSQCFGAWFTQCPGLKVVSPY 146 (207)
Q Consensus 82 ~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~----------g~---~~-hhs~~~~a~~~~iPgl~v~~P~ 146 (207)
.|.+ .++.+. .++ +.++|++++.. +++.. .. ++ .+..++..+.+.+ |++-+...
T Consensus 542 sf~~-~~~eL~-ta~--------~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~-G~~~~~v~ 610 (677)
T 1t9b_A 542 SFNM-TLTELS-SAV--------QAGTPVKILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAM-GLKGLRVK 610 (677)
T ss_dssp HHHH-HGGGHH-HHH--------HHTCCCEEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHT-TCEEEEEC
T ss_pred HHhc-cHHHHH-HHH--------HhCCCeEEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHc-CCeEEEEC
Confidence 2222 343332 334 56788776654 33221 00 11 1234556666666 88888889
Q ss_pred CHHHHHHHHHHHHcCCCcEEEE
Q psy10429 147 NSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 147 ~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+.+|+...++.+++.++|++|-
T Consensus 611 ~~~el~~al~~a~~~~gp~lIe 632 (677)
T 1t9b_A 611 KQEELDAKLKEFVSTKGPVLLE 632 (677)
T ss_dssp SHHHHHHHHHHHHHCSSCEEEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEE
Confidence 9999999999999999999884
No 28
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=96.04 E-value=0.021 Score=52.56 Aligned_cols=113 Identities=16% Similarity=-0.076 Sum_probs=77.1
Q ss_pred eccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC--CCCCCCCch
Q psy10429 52 DTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA--SGVAAQHSQ 128 (207)
Q Consensus 52 ~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~--~g~~~hhs~ 128 (207)
-....|+++..+|.|+|+. |...++...+..-+..++.-|. ++. ..+.||+++..+-+. .+.+.+|..
T Consensus 47 i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~gl~-~A~--------~~~vPll~Itg~~p~~~~g~~~~Q~~ 117 (590)
T 1v5e_A 47 LQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLINGLY-DAA--------MDNIPVVAILGSRPQRELNMDAFQEL 117 (590)
T ss_dssp EECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHHHHH-HHH--------HHTCCEEEEEEECCGGGTTTTCTTCC
T ss_pred EeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHHHHH-HHH--------hcCCCEEEEcCCCCcccCCCCccccc
Confidence 3468999999999999998 5444544444344455566554 333 458999998765332 233445544
Q ss_pred hHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----C-CCcEEEEECccccc
Q psy10429 129 CFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----D-PDPVVFLENELLYG 175 (207)
Q Consensus 129 ~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~-~~P~~i~~~k~l~~ 175 (207)
+..++++.+-.. .+.+.+++++..+++.|++ . ++||+| .|+....
T Consensus 118 d~~~~~~~~tk~-~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l-iP~dv~~ 167 (590)
T 1v5e_A 118 NQNPMYDHIAVY-NRRVAYAEQLPKLVDEAARMAIAKRGVAVLE-VPGDFAK 167 (590)
T ss_dssp CCHHHHHTTCSE-EEECCSGGGHHHHHHHHHHHHHHTTSEEEEE-EETTGGG
T ss_pred CHHHHHHhhccE-EEEeCCHHHHHHHHHHHHHHHhcCCCceEEE-Eccchhh
Confidence 567899999776 6667788888777776654 3 599999 9876653
No 29
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=95.53 E-value=0.29 Score=44.56 Aligned_cols=126 Identities=15% Similarity=0.089 Sum_probs=76.9
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+ +.-|++.+ ..|+++.-+|.|+|+. |...++...+..-+..++.-|. ++. ..+.||+++.
T Consensus 39 ~l~~al~~--~~i~~v~~-~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~l~-~A~--------~~~vPll~it 106 (566)
T 1ozh_A 39 KVFDSLLD--SSIRIIPV-RHEANAAFMAAAVGRITGKAGVALVTSGPGCSNLITGMA-TAN--------SEGDPVVALG 106 (566)
T ss_dssp HHHHHGGG--SSSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHHHHH-HHH--------HHTCCEEEEE
T ss_pred HHHHHHHh--CCCcEEEe-CCHHHHHHHHHHHHHHHCCCEEEEEccChHHHHHHHHHH-HHH--------hcCCCEEEEe
Confidence 34455544 22456654 8999999999999996 6544444443333444555544 333 4589999887
Q ss_pred CCCCC--CCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHH----cC-CCcEEEEECcccc
Q psy10429 115 PNGAA--SGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAI----RD-PDPVVFLENELLY 174 (207)
Q Consensus 115 ~~G~~--~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~----~~-~~P~~i~~~k~l~ 174 (207)
.+-.. .+.+.+|..+..++++.+.-... ...+++++...++.|+ .. ++||+|-.|..+.
T Consensus 107 g~~~~~~~~~~~~Q~~d~~~~~~~~tk~~~-~v~~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~dv~ 172 (566)
T 1ozh_A 107 GAVKRADKAKQVHQSMDTVAMFSPVTKYAI-EVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVV 172 (566)
T ss_dssp EECCTTTC------CCCHHHHHGGGCSEEE-ECCSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHHH
T ss_pred CCCccccCCCCcccccCHHHHHHHHhheEE-EcCCHHHHHHHHHHHHHHHhcCCCCeEEEEeChhhh
Confidence 65333 24455666677899999876654 4456666666555544 33 6999998876544
No 30
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=94.98 E-value=0.46 Score=43.13 Aligned_cols=150 Identities=10% Similarity=0.031 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhcC-CcEEEEecCCCccCCc-hhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhh
Q psy10429 6 ALNSALDEEMARD-EKVFLLGEEVALYDGA-YKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFN 82 (207)
Q Consensus 6 a~~~~L~~~~~~~-~~vv~~~~D~~~~~g~-~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~ 82 (207)
...+.|.+.+++. -+.++... |+. ..+.+.|.+ .+.-|++- ...|+++.-+|-|+|+. |...++..-+.-
T Consensus 9 ~~a~~lv~~L~~~GV~~vFg~P-----G~~~~~l~dal~~-~~~i~~i~-~~hE~~Aa~~AdGyAr~tG~pgv~~~TsGp 81 (556)
T 3hww_A 9 RWAAVILEALTRHGVRHICIAP-----GSRSTLLTLAAAE-NSAFIHHT-HFDERGLGHLALGLAKVSKQPVAVIVTSGT 81 (556)
T ss_dssp HHHHHHHHHHHTTTCCEEEECC-----CTTSHHHHHHHHH-CTTCEEEE-CSCHHHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred HHHHHHHHHHHHCCCCEEEEcC-----CCCcHHHHHHHhh-CCCceEEE-ecCCcHHHHHHHHHHHhhCCCEEEEECCCc
Confidence 3556666666544 33333222 221 234455543 32235554 56899999999999996 654444444333
Q ss_pred HHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC--CCCCCCCchhHhHHHcCCCCcEEEeeCC-----HHHHHHHH
Q psy10429 83 FSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA--SGVAAQHSQCFGAWFTQCPGLKVVSPYN-----SEDAKGLL 155 (207)
Q Consensus 83 ~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~--~g~~~hhs~~~~a~~~~iPgl~v~~P~~-----~~e~~~ll 155 (207)
-...++.-|- ++. ..+.||++++.+-.. .+.+.+|..+..++++.+--.....+.. +++...++
T Consensus 82 G~~N~~~gia-~A~--------~d~vPll~itG~~~~~~~g~~~~Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~i~~~i 152 (556)
T 3hww_A 82 AVANLYPALI-EAG--------LTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTI 152 (556)
T ss_dssp HHHTTHHHHH-HHH--------HHCCCEEEEEEECCGGGSSSSCTTCCCCTTTTTTCSSEEEECCCCCTTSCHHHHHHHH
T ss_pred HHHhhhHHHH-HHH--------HhCCCeEEEeCCCCHHHhccCCCccccHHHHHhhheeEEEecCCCcccccHHHHHHHH
Confidence 3444454443 333 468999998754333 2445566666678888887766555432 45688899
Q ss_pred HHHHcC--CCcEEEEECc
Q psy10429 156 KAAIRD--PDPVVFLENE 171 (207)
Q Consensus 156 ~~a~~~--~~P~~i~~~k 171 (207)
+.|+.. ++||+|-.|+
T Consensus 153 ~~A~~~~r~GPV~i~iP~ 170 (556)
T 3hww_A 153 DHALGTLHAGGVHINCPF 170 (556)
T ss_dssp HHHHHSCCSSCEEEEEEC
T ss_pred HHHHhcCCCCCEEEeCCc
Confidence 988864 6899998775
No 31
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=94.93 E-value=0.39 Score=43.91 Aligned_cols=126 Identities=17% Similarity=0.109 Sum_probs=81.4
Q ss_pred hchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC
Q psy10429 37 VSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP 115 (207)
Q Consensus 37 ~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~ 115 (207)
+.+.|.+ .+.-|++ ....|+++..+|.|+|+. |...++..-+.--...++.-|- ++. ..+.||+++..
T Consensus 41 l~~al~~-~~~i~~i-~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~gv~-~A~--------~~~vPll~itg 109 (590)
T 1ybh_A 41 IHQALTR-SSSIRNV-LPRHEQGGVFAAEGYARSSGKPGICIATSGPGATNLVSGLA-DAL--------LDSVPLVAITG 109 (590)
T ss_dssp HHHHHHH-CSSCEEC-CCSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHH-HHH--------HHTCCEEEEEE
T ss_pred HHHHHhc-cCCccEE-eeCCHHHHHHHHHHHHHHHCCCEEEEeccCchHHHHHHHHH-HHH--------hhCCCEEEEeC
Confidence 4444543 2223444 467999999999999997 6544444443333444454443 323 46899998865
Q ss_pred CCCC--CCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc-----CCCcEEEEECcccc
Q psy10429 116 NGAA--SGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR-----DPDPVVFLENELLY 174 (207)
Q Consensus 116 ~G~~--~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~-----~~~P~~i~~~k~l~ 174 (207)
+-.. .+.+.+|..+..++++.+-... +...+++++..+++.|++ .++||+|-.|....
T Consensus 110 ~~~~~~~g~~~~Q~~d~~~~~~~~~k~~-~~v~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~dv~ 174 (590)
T 1ybh_A 110 QVPRRMIGTDAFQETPIVEVTRSITKHN-YLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDIQ 174 (590)
T ss_dssp ECCGGGTTTTCTTCCCHHHHHGGGSSEE-EECCCGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHHH
T ss_pred cCCccccCCCcccccCHHHHHHHHhCeE-EecCCHHHHHHHHHHHHHHHhhCCCceEEEEeCcchh
Confidence 4322 2445566666779999998764 445678888888887775 36899998776543
No 32
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=94.73 E-value=0.45 Score=42.81 Aligned_cols=115 Identities=16% Similarity=0.091 Sum_probs=73.3
Q ss_pred ceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC--CCCCCC
Q psy10429 49 RVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA--SGVAAQ 125 (207)
Q Consensus 49 r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~--~g~~~h 125 (207)
|++ ....|+++..+|.|+|+. |...++...+..-+..++.-|. ++. ..+.||+++..+-.. .+.+..
T Consensus 40 ~~i-~~~~E~~Aa~~A~Gyar~tg~~~v~~~tsGpG~~N~~~~l~-~A~--------~~~~Pll~itg~~~~~~~~~~~~ 109 (528)
T 1q6z_A 40 RYI-LALQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMGALS-NAW--------NSHSPLIVTAGQQTRAMIGVEAL 109 (528)
T ss_dssp EEE-ECSSHHHHHHHHHHHHHHHTSCEEEEEEHHHHHHHTHHHHH-HHH--------HTTCCEEEEEEECCHHHHTTTCT
T ss_pred cEE-EECcHHHHHHHHHHHHHHhCCCEEEEEcCChHHHHHHHHHH-HHh--------hcCCCEEEEeCCCcccccCCCcc
Confidence 444 567999999999999997 6655555555344555666665 333 469999988654222 133333
Q ss_pred Cc-hhHhHHHcCCCCcEEEeeCCHHHHHHHHHHH----HcC-CCcEEEEECcccc
Q psy10429 126 HS-QCFGAWFTQCPGLKVVSPYNSEDAKGLLKAA----IRD-PDPVVFLENELLY 174 (207)
Q Consensus 126 hs-~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a----~~~-~~P~~i~~~k~l~ 174 (207)
|. .+..++++.+-..... +.+++++...++.| ... ++||+|-.|....
T Consensus 110 q~~~d~~~~~~~~~k~~~~-v~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d~~ 163 (528)
T 1q6z_A 110 LTNVDAANLPRPLVKWSYE-PASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDDW 163 (528)
T ss_dssp TCCTTGGGSSTTSCSCEEC-CSSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGGGT
T ss_pred cccccHHHHHHHhhHhhhc-CCCHHHHHHHHHHHHHHHhcCCCCcEEEEechhhh
Confidence 33 4667888888766544 44555555555544 433 6899998776544
No 33
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=94.59 E-value=0.43 Score=43.86 Aligned_cols=126 Identities=15% Similarity=0.042 Sum_probs=80.7
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEE-echhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEE
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCE-FMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFR 113 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~-~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~ 113 (207)
.+.+.|.+ .+.-|++ ....|+++..+|.|+|+. |-+|-+. ..+.--...++.-|. ++. ..+.||+++
T Consensus 55 ~l~~al~~-~~~i~~i-~~~~E~~Aa~~A~GyAr~tgg~~~v~~~TsGpG~~N~~~~l~-~A~--------~~~vPlvvI 123 (616)
T 2pan_A 55 PFYSAMRK-HGGIRHI-LARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALY-SAS--------ADSIPILCI 123 (616)
T ss_dssp HHHHHHHH-HCCCEEE-ECSSHHHHHHHHHHHHHHSTTCCEEEEECSTHHHHTSHHHHH-HHH--------HTTCCEEEE
T ss_pred HHHHHHHh-cCCCcEE-eeCCHHHHHHHHHHHHHhcCCCceEEEeCCCchHHHHHHHHH-HHH--------hcCCCEEEE
Confidence 34455544 3223444 568999999999999997 4565543 333233344555554 444 469999998
Q ss_pred eCCCCC--CCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc-----CCCcEEEEECccc
Q psy10429 114 GPNGAA--SGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR-----DPDPVVFLENELL 173 (207)
Q Consensus 114 ~~~G~~--~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~-----~~~P~~i~~~k~l 173 (207)
+.+-+. .+.+.+|..+..++++.+--...-. .++++...+++.|++ .++||+|-.|...
T Consensus 124 tg~~p~~~~~~~~~Q~~d~~~~~~~~tk~~~~v-~~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~d~ 189 (616)
T 2pan_A 124 TGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTV-REAALVPRVLQQAFHLMRSGRPGPVLVDLPFDV 189 (616)
T ss_dssp EEECCGGGTTTTCTTCCCHHHHHGGGSSEEEEC-CSGGGHHHHHHHHHHHHHSSSCCCEEEEEEHHH
T ss_pred ecCCcccccCcccccccCHHHHHHHHHHhhccc-CCHHHHHHHHHHHHHHHhcCCCceEEEEcchhh
Confidence 754332 2344455556678999987776544 567788887777765 2699999777544
No 34
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=94.54 E-value=0.52 Score=44.08 Aligned_cols=115 Identities=18% Similarity=0.145 Sum_probs=76.9
Q ss_pred ceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC--CCCCCC
Q psy10429 49 RVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA--SGVAAQ 125 (207)
Q Consensus 49 r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~--~g~~~h 125 (207)
|++ ....|+++.-+|.|+|+. |...++..-+.--...++.-|- ++. ..+.||+++..+-.. .+.+.+
T Consensus 122 ~~v-~~~hE~~Aa~aAdGyAr~tGkpgvv~~TsGpG~~N~~~gia-~A~--------~d~vPllvItG~~~~~~~g~~a~ 191 (677)
T 1t9b_A 122 NFV-LPKHEQGAGHMAEGYARASGKPGVVLVTSGPGATNVVTPMA-DAF--------ADGIPMVVFTGQVPTSAIGTDAF 191 (677)
T ss_dssp EEE-CCSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHHHHH-HHH--------HHTCCEEEEEEECCTTTTTSCCT
T ss_pred eEE-EeCChHHHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHHH-HHH--------HcCCCEEEEeCCCChhhcCCCCc
Confidence 455 468999999999999996 6544444444333444555544 333 468999988654332 244556
Q ss_pred CchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc-----CCCcEEEEECcccc
Q psy10429 126 HSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR-----DPDPVVFLENELLY 174 (207)
Q Consensus 126 hs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~-----~~~P~~i~~~k~l~ 174 (207)
|..+..++++.+--..... .+++++...++.|++ .++||+|-.|+-+.
T Consensus 192 Q~~Dq~~i~~~~tk~~~~v-~~~~~i~~~i~~A~~~A~~grpGPV~l~lP~Dv~ 244 (677)
T 1t9b_A 192 QEADVVGISRSCTKWNVMV-KSVEELPLRINEAFEIATSGRPGPVLVDLPKDVT 244 (677)
T ss_dssp TCCCHHHHTGGGSSEEEEC-CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHHH
T ss_pred cccCHHHHhhhheeEEEEc-CCHHHHHHHHHHHHHHHhhCCCceEEEEcCHHHh
Confidence 6666778999887765554 567788877777765 37999998775543
No 35
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=94.52 E-value=0.73 Score=41.92 Aligned_cols=128 Identities=13% Similarity=-0.002 Sum_probs=74.9
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+ . +.+.+=....|+++.-+|.|+|+. |...++...+..-...++.-|- ++. ..+.||+++.
T Consensus 49 ~l~~al~~-~-~~~~~i~~~~E~~Aa~~A~GyAr~tgkp~v~~~TsGpG~~N~~~gv~-~A~--------~~~vPll~it 117 (565)
T 2nxw_A 49 PFFKVAEE-T-QILPLHTLSHEPAVGFAADAAARYSSTLGVAAVTYGAGAFNMVNAVA-GAY--------AEKSPVVVIS 117 (565)
T ss_dssp HHHHHHHH-H-CSSCEEECSSHHHHHHHHHHHHHHHTSCEEEEECTTHHHHTTHHHHH-HHH--------HTTCCEEEEE
T ss_pred HHHHHHHh-C-CCcEEEecCcHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHH-HHH--------hhCCCEEEEe
Confidence 34455543 3 244556789999999999999997 6544444443333444454443 333 4689999987
Q ss_pred CCCCC--CCCCC--CC-chh---HhHHHcCCCCcEEEeeCCHHH----HHHHHHHHHcCCCcEEEEECccccc
Q psy10429 115 PNGAA--SGVAA--QH-SQC---FGAWFTQCPGLKVVSPYNSED----AKGLLKAAIRDPDPVVFLENELLYG 175 (207)
Q Consensus 115 ~~G~~--~g~~~--hh-s~~---~~a~~~~iPgl~v~~P~~~~e----~~~ll~~a~~~~~P~~i~~~k~l~~ 175 (207)
.+-.. .+.+. || .|+ ..++++.+--..... .++++ ...+++.|...++||+|-.|+-+.+
T Consensus 118 g~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~~~~v-~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~Dv~~ 189 (565)
T 2nxw_A 118 GAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVAQARL-DDPAKAPAEIARVLGAARAQSRPVYLEIPRNMVN 189 (565)
T ss_dssp EECCTTCC--CCCC-------CHHHHHHTTSCSCEEEC-CCTTTHHHHHHHHHHHHHHHTCCEEEEEEGGGTT
T ss_pred CCCChhhhccCcceeeeccchhhHHHHHHhhheEEEEe-CCHHHHHHHHHHHHHHHHhCCCCEEEECChhhhc
Confidence 65322 22222 33 232 358999887665444 34444 4445555554589999988866553
No 36
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=94.39 E-value=0.8 Score=41.59 Aligned_cols=126 Identities=17% Similarity=0.118 Sum_probs=76.9
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+. +.-|++- ...|+++..+|.|+|+. | ..++..-+..-...++.-|. ++. ..+.||++++
T Consensus 31 ~l~~al~~~-~~i~~i~-~~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia-~A~--------~~~vPll~it 98 (568)
T 2wvg_A 31 VLLDNLLLN-KNMEQVY-CCNELNCGFSAEGYARAKG-AAAAVVTYSVGALSAFDAIG-GAY--------AENLPVILIS 98 (568)
T ss_dssp HHHHHHHTC-TTSEEEE-CSSHHHHHHHHHHHHHHHS-CEEEEECTTTTHHHHHHHHH-HHH--------HTTCCEEEEE
T ss_pred HHHHHHhcc-CCceEec-cCcHHHHHHHHHHHHHhhC-CeEEEEeCCCCHHHHHHHHH-HHh--------hhCCCEEEEe
Confidence 344455443 2235665 48999999999999986 8 44444433333445666655 333 5689999987
Q ss_pred CCCCC--CCCC--CCCc----h--hHhHHHcCCCCcEEEeeCCHHHHHHHHHH----HHcCCCcEEEEECcccc
Q psy10429 115 PNGAA--SGVA--AQHS----Q--CFGAWFTQCPGLKVVSPYNSEDAKGLLKA----AIRDPDPVVFLENELLY 174 (207)
Q Consensus 115 ~~G~~--~g~~--~hhs----~--~~~a~~~~iPgl~v~~P~~~~e~~~ll~~----a~~~~~P~~i~~~k~l~ 174 (207)
.+-+. .+.+ .||. + +..++++.+--... ...+++++...++. |...++||+|-.|....
T Consensus 99 g~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~~-~v~~~~~~~~~l~~A~~~A~~~~GPV~l~iP~dv~ 171 (568)
T 2wvg_A 99 GAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAE-AIYTPEEAPAKIDHVIKTALREKKPVYLEIACNIA 171 (568)
T ss_dssp EECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSCEE-EECSGGGHHHHHHHHHHHHHHHTCCEEEEEEGGGT
T ss_pred CCCChhHhccCcceeeeccccchHHHHHHHHhhEeEEE-EeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhHh
Confidence 54332 1222 2442 2 35699999977744 44556655555544 44457999998876543
No 37
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.30 E-value=0.17 Score=45.99 Aligned_cols=124 Identities=18% Similarity=0.060 Sum_probs=80.3
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+. + -|++. ...|+++..+|.|+|+. |...++..-+.--+..++.-|- ++. ..+.||+++.
T Consensus 32 ~l~~al~~~-~-i~~i~-~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~l~-~A~--------~~~~Pll~it 99 (563)
T 2uz1_A 32 TIFQACLDH-D-VPIID-TRHEAAAGHAAEGYARAGAKLGVALVTAGGGFTNAVTPIA-NAW--------LDRTPVLFLT 99 (563)
T ss_dssp HHHHHHHHH-T-CCEEE-CSSHHHHHHHHHHHHHHHTSCEEEEECTTHHHHTTHHHHH-HHH--------HHTCCEEEEE
T ss_pred HHHHHHHhc-C-CcEEe-eCCHHHHHHHHHHHHHHhCCCEEEEEccCccHHHHHHHHH-HHH--------hcCCCEEEEe
Confidence 344555443 3 46665 58999999999999997 6544444444333445555554 333 4689999886
Q ss_pred CCCCC--CCCCCCCc-hhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----C-CCcEEEEECcc
Q psy10429 115 PNGAA--SGVAAQHS-QCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----D-PDPVVFLENEL 172 (207)
Q Consensus 115 ~~G~~--~g~~~hhs-~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~-~~P~~i~~~k~ 172 (207)
.+-.. .+.+.+|. .+..++++.+--.. ....+++++..+++.|++ . ++||+|-.|..
T Consensus 100 g~~~~~~~~~~~~Q~~~d~~~~~~~~tk~~-~~v~~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 100 GSGALRDDETNTLQAGIDQVAMAAPITKWA-HRVMATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp EECCGGGTTSCCTTCCCCHHHHHGGGCSEE-EECCCGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred CCCCcccCCchhhhhhccHHHHhhhhhceE-EEcCCHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 54332 24455666 66779999987654 444567777766666554 3 69999987765
No 38
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=94.11 E-value=1.2 Score=40.88 Aligned_cols=128 Identities=13% Similarity=-0.002 Sum_probs=77.0
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+.-+.-|++ ....|+++.-+|.|+|+. |...++...+.--...++.-|- ++. ..+.||++++
T Consensus 39 ~l~dal~~~~~~i~~i-~~~hE~~Aa~aA~GyAr~tg~~gv~~~TsGpG~~N~~~gia-~A~--------~~~vPvl~it 108 (603)
T 4feg_A 39 SIMDALSAERDRIHYI-QVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHLMNGLY-DAR--------EDHVPVLALI 108 (603)
T ss_dssp HHHHHHHHTTTTSEEE-ECSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHH-HHH--------HTTCCEEEEE
T ss_pred HHHHHHHhccCCCeEE-EecChHHHHHHHHHHHHHhCCceEEEecCCchHHHHHHHHH-HHH--------HcCCCEEEEe
Confidence 3445555432123555 467999999999999986 6544444443333444555543 333 4689999887
Q ss_pred CCCCCC--CCCCCCchhHhHHHcCCCCcEEEeeCCHHHH----HHHHHHHHcCCCcEEEEECcccc
Q psy10429 115 PNGAAS--GVAAQHSQCFGAWFTQCPGLKVVSPYNSEDA----KGLLKAAIRDPDPVVFLENELLY 174 (207)
Q Consensus 115 ~~G~~~--g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~----~~ll~~a~~~~~P~~i~~~k~l~ 174 (207)
.+-... +.+..|..+..++++.+--..... .+++++ ..+++.|...++||+|-.|+...
T Consensus 109 G~~~~~~~~~~~~Q~~d~~~~~~~~tk~~~~v-~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~dv~ 173 (603)
T 4feg_A 109 GQFGTTGMNMDTFQEMNENPIYADVADYNVTA-VNAATLPHVIDEAIRRAYAHQGVAVVQIPVDLP 173 (603)
T ss_dssp EECCTTTTTSCCTTCCCCGGGGTTTCSEEEEC-CCSTTHHHHHHHHHHHHHHHTSEEEEEEETTGG
T ss_pred cCCcccccCCCccccccHHHHhhhhceEEEEc-CCHHHHHHHHHHHHHHHhcCCCCEEEEeChhhh
Confidence 543332 334444445568888886654443 344444 44555555568999998776444
No 39
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=94.08 E-value=0.33 Score=44.28 Aligned_cols=116 Identities=12% Similarity=-0.030 Sum_probs=76.9
Q ss_pred CceeeccchhHHHHHHHHHHHhcCCcc-EEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC--CCC-C
Q psy10429 48 KRVLDTPITEIGFAGIAVGAAMAGLRP-VCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA--SGV-A 123 (207)
Q Consensus 48 ~r~~~~gIaE~~~vg~A~GlA~~G~~p-i~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~--~g~-~ 123 (207)
-|++- ...|+++.-+|.|+|+.--+| ++..-+..-...++.-|. ++. ..+.||+++..+-.. .+. +
T Consensus 49 i~~i~-~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~v~-~A~--------~~~~Pll~itg~~~~~~~~~~~ 118 (573)
T 2iht_A 49 IDFVL-TRHEFTAGVAADVLARITGRPQACWATLGPGMTNLSTGIA-TSV--------LDRSPVIALAAQSESHDIFPND 118 (573)
T ss_dssp CEEEE-CSSHHHHHHHHHHHHHHHCSCEEEEECTTHHHHHHHHHHH-HHH--------HHTCCEEEEEEESCGGGCCTTT
T ss_pred CeEEe-eCCHHHHHHHHHHHHHHHCCCEEEEEccCchHHHHHHHHH-HHH--------hhCCCEEEEcccCcccccCCcC
Confidence 35554 589999999999999974444 443333334455565554 333 468999998754332 244 6
Q ss_pred CCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----C-CCcEEEEECcccc
Q psy10429 124 AQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----D-PDPVVFLENELLY 174 (207)
Q Consensus 124 ~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~-~~P~~i~~~k~l~ 174 (207)
.||..+..++++.+--.... ..+++++...++.|++ . ++||+|-.|....
T Consensus 119 ~~Q~~d~~~~~~~~~k~~~~-v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~ 173 (573)
T 2iht_A 119 THQCLDSVAIVAPMSKYAVE-LQRPHEITDLVDSAVNAAMTEPVGPSFISLPVDLL 173 (573)
T ss_dssp STTCCCHHHHHGGGSSEEEE-CCSGGGHHHHHHHHHHHHTBSSCCCEEEEEEHHHH
T ss_pred ccccCCHHHHHHhHhhEEEE-cCCHHHHHHHHHHHHHHHhcCCCceEEEEecchHh
Confidence 67777778999999866544 4556666666665553 3 5999998886654
No 40
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=93.97 E-value=0.56 Score=42.89 Aligned_cols=127 Identities=20% Similarity=0.135 Sum_probs=77.3
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+.-+.=|++. ...|+++.-+|-|+|+. |...++..-+..-...++.-|. ++. ..+.||++++
T Consensus 32 ~l~~al~~~~~~i~~v~-~~hE~~Aa~~A~GyAr~tg~p~v~~~TsGpG~~N~~~gv~-~A~--------~~~vPll~it 101 (589)
T 2pgn_A 32 FVADAFSKSHLGKRVIN-PATELGGAWMVNGYNYVKDRSAAVGAWHCVGNLLLHAAMQ-EAR--------TGRIPAVHIG 101 (589)
T ss_dssp HHHHHHHTSTTSTTCBC-CSSHHHHHHHHHHHHHHHTSCCEEEEEEGGGGGGCHHHHH-HHH--------HTTCCEEEEE
T ss_pred HHHHHHHhcCCCCeEEE-eCcHHHHHHHHHHHHHHHCCCEEEEEecCchHHHHHHHHH-HHH--------hcCCCEEEEe
Confidence 34445543201235554 48999999999999996 5433333333233334454443 333 5689999887
Q ss_pred CCCCC--CCCC-CCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----C-CCcEEEEECcccc
Q psy10429 115 PNGAA--SGVA-AQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----D-PDPVVFLENELLY 174 (207)
Q Consensus 115 ~~G~~--~g~~-~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~-~~P~~i~~~k~l~ 174 (207)
.+-.. .+.+ .||..+..+ ++.+--... ...+++++...++.|++ . ++||+|-.|....
T Consensus 102 g~~~~~~~~~~~~~Q~~d~~~-~~~~tk~~~-~v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~ 167 (589)
T 2pgn_A 102 LNSDGRLAGRSEAAQQVPWQS-FTPIARSTQ-RVERLDKVGEAIHEAFRVAEGHPAGPAYVDIPFDLT 167 (589)
T ss_dssp EESCGGGTTCTTCSSCCCGGG-GTTTSSEEE-ECCSGGGHHHHHHHHHHHHTSSSCCEEEEEEETHHH
T ss_pred cCCcccccCCCCcccccChhh-ccccEEEEe-ecCCHHHHHHHHHHHHHHHhcCCCccEEEEeCHhhh
Confidence 54332 2445 677666667 888876554 44566666666665553 3 5999998776543
No 41
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=93.91 E-value=1.5 Score=39.69 Aligned_cols=127 Identities=16% Similarity=0.089 Sum_probs=78.3
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+. +.-|++ ....|+++.-+|-|+|+. |...++...+.--...++.-|- ++. ..+.||++++
T Consensus 31 ~l~dal~~~-~~i~~i-~~~~E~~Aa~~A~GyAr~tg~~~v~~~TsGpG~~N~~~gi~-~A~--------~~~vPvl~it 99 (549)
T 3eya_A 31 GLSDSLNRM-GTIEWM-STRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLF-DCH--------RNHVPVLAIA 99 (549)
T ss_dssp HHHHHHHHH-CSSEEE-ECSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHH-HHH--------HTTCCEEEEE
T ss_pred HHHHHHHhc-CCCeEE-EeCChHHHHHHHHHHHHHhCCCEEEEeCCCCcHhhhHHHHH-HHH--------hhCCCEEEEe
Confidence 344555443 223555 457999999999999996 6544444333333444555444 333 5689999987
Q ss_pred CCCCC--CCCCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHH----HHHcCCCcEEEEECcccc
Q psy10429 115 PNGAA--SGVAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLK----AAIRDPDPVVFLENELLY 174 (207)
Q Consensus 115 ~~G~~--~g~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~----~a~~~~~P~~i~~~k~l~ 174 (207)
.+-.. .+.+.+|..+..++++.+--.... ..+++++...++ .|...++|++|-.|.-..
T Consensus 100 g~~~~~~~~~~~~Q~~d~~~~~~~~tk~~~~-v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~dv~ 164 (549)
T 3eya_A 100 AHIPSSEIGSGYFQETHPQELFRECSHYCEL-VSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVA 164 (549)
T ss_dssp EESCGGGTTSCCTTCCCHHHHTSTTCSEEEE-CCSGGGHHHHHHHHHHHHHHTTSEEEEEEEHHHH
T ss_pred CCCchhhcCCCCCCccCHHHHHhhhhheEEE-eCCHHHHHHHHHHHHHHHhhCCCCEEEEeChhHh
Confidence 54332 244455556677899988765444 345555555544 444568999998776444
No 42
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=93.30 E-value=0.85 Score=41.80 Aligned_cols=127 Identities=17% Similarity=-0.009 Sum_probs=76.6
Q ss_pred hhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEe
Q psy10429 36 KVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRG 114 (207)
Q Consensus 36 ~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~ 114 (207)
.+.+.|.+ .+.=|++-+ ..|+++.-+|-|+|+. |...++..-+..-...++.-|- ++. ..+.||++++
T Consensus 59 ~l~dal~~-~~~i~~i~~-~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~~N~~~gia-~A~--------~~~vPlv~It 127 (604)
T 2x7j_A 59 PLAVLCAA-HPDISVHVQ-IDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYPAVV-EAH--------YSRVPIIVLT 127 (604)
T ss_dssp HHHHHHHH-CTTCEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEECSSHHHHTTHHHHH-HHH--------HHTCCEEEEE
T ss_pred HHHHHHHh-CCCceEEEe-cChHHHHHHHHHHHHhhCCCEEEEECChhHHHHHHHHHH-HHh--------hcCCCEEEEe
Confidence 34455543 222466654 8999999999999997 5443444333333444444443 333 4589999987
Q ss_pred CCCCC--CCCCCCCchhHhHHHcCCCCcEEEe--eCC--------HHHHHHHHHHHHc-CCCcEEEEECccc
Q psy10429 115 PNGAA--SGVAAQHSQCFGAWFTQCPGLKVVS--PYN--------SEDAKGLLKAAIR-DPDPVVFLENELL 173 (207)
Q Consensus 115 ~~G~~--~g~~~hhs~~~~a~~~~iPgl~v~~--P~~--------~~e~~~ll~~a~~-~~~P~~i~~~k~l 173 (207)
.+-.. .+.+.+|..+..++++.+--..... |.+ +.....+++.|.. .++||+|-.|+..
T Consensus 128 G~~~~~~~g~~~~Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d~ 199 (604)
T 2x7j_A 128 ADRPHELREVGAPQAINQHFLFGNFVKFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLRE 199 (604)
T ss_dssp EECCGGGSSSCCTTCCCCTTTTGGGSSCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECCS
T ss_pred CCCCHHHhCCCCCCcCcHHHHhhhheeeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccCc
Confidence 54332 2334455555567888886665444 443 3445556666665 5899999877543
No 43
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=93.08 E-value=1.5 Score=39.78 Aligned_cols=125 Identities=13% Similarity=-0.001 Sum_probs=77.7
Q ss_pred hchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC
Q psy10429 37 VSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP 115 (207)
Q Consensus 37 ~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~ 115 (207)
+.+.+.+ . .-|++. ...|+++.-+|-|+|+. |...++..-+..-...++.-|- ++. ..+.||++++.
T Consensus 39 l~~al~~-~-~i~~i~-~~~E~~Aa~~A~GyAr~tg~pgv~~~TsGpG~~N~~~~i~-~A~--------~~~vPll~itg 106 (568)
T 2c31_A 39 LARMWQD-D-GQRFYS-FRHEQHAGYAASIAGYIEGKPGVCLTVSAPGFLNGVTSLA-HAT--------TNCFPMILLSG 106 (568)
T ss_dssp HHHHHHH-T-TCEEEE-CSSHHHHHHHHHHHHHHHSSCEEEEECSHHHHHHHHHHHH-HHH--------HHTCCEEEEEE
T ss_pred HHHHHHh-C-CCcEEE-eCcHHHHHHHHHHHHHHhCCCEEEEEcCCccHHHHHHHHH-HHH--------hcCCCEEEEcc
Confidence 3444543 2 246665 48999999999999997 5543444444334455555554 333 46899998875
Q ss_pred CCCCC--C--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHH----HHHc-CCCcEEEEECcccc
Q psy10429 116 NGAAS--G--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLK----AAIR-DPDPVVFLENELLY 174 (207)
Q Consensus 116 ~G~~~--g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~----~a~~-~~~P~~i~~~k~l~ 174 (207)
+-... + .+.+|..+..++++.+--..... .+++++...++ .|.. .++||+|-.|..+.
T Consensus 107 ~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~~~v-~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~ 173 (568)
T 2c31_A 107 SSEREIVDLQQGDYEEMDQMNVARPHCKASFRI-NSIKDIPIGIARAVRTAVSGRPGGVYVDLPAKLF 173 (568)
T ss_dssp ECCHHHHHTTCCCTTCCCHHHHSGGGSSEEEEC-CSGGGHHHHHHHHHHHHHSSSCCEEEEEEETHHH
T ss_pred CCCccccCCCCCcccccCHHHHHHhhhheeeec-CCHHHHHHHHHHHHHHhcCCCCceEEEeCCHHHh
Confidence 43321 2 24455556678899887765444 45555555444 4444 57999998887654
No 44
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=93.00 E-value=0.38 Score=44.02 Aligned_cols=112 Identities=13% Similarity=0.088 Sum_probs=67.8
Q ss_pred CCceeeccc--hhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCC-C-
Q psy10429 47 DKRVLDTPI--TEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAA-S- 120 (207)
Q Consensus 47 ~~r~~~~gI--aE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~-~- 120 (207)
|.+|++.+- +--..++.|.|+|+.. -++++.+..-.-++..++.+. .++ +.++|++++.- ++.. .
T Consensus 416 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i~GDGs~~~~~~~L~-ta~--------~~~l~~~ivv~NN~~~~~~ 486 (590)
T 1ybh_A 416 PRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELA-TIR--------VENLPVKVLLLNNQHLGMV 486 (590)
T ss_dssp TTSEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEEEHHHHHHTTTHHH-HHH--------HTTCCEEEEEEECSBCHHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCcEEEEEccchhhccHHHHH-HHH--------HhCCCcEEEEEECCcchHH
Confidence 578888753 2334778899988863 356666553211122343332 334 56889776654 3322 0
Q ss_pred --------CC---C----CC-----CchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 --------GV---A----AQ-----HSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 --------g~---~----~h-----hs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+. . .. ...++..+.+.+ |++.+...+++|++.+++.+++.++|++|-
T Consensus 487 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 553 (590)
T 1ybh_A 487 MQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAAC-GIPAARVTKKADLREAIQTMLDTPGPYLLD 553 (590)
T ss_dssp HHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHT-TCCEEEECBHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHhcCCccccccccccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 00 0 11 123455565655 666667789999999999999999999884
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=92.94 E-value=1.1 Score=40.83 Aligned_cols=149 Identities=14% Similarity=0.047 Sum_probs=85.5
Q ss_pred HHHHHHHHHhcC-CcEEEEecCCCccCCc-hhhchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhH
Q psy10429 7 LNSALDEEMARD-EKVFLLGEEVALYDGA-YKVSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNF 83 (207)
Q Consensus 7 ~~~~L~~~~~~~-~~vv~~~~D~~~~~g~-~~~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~ 83 (207)
..+.|.+.+++. -+.++... |+. ..+.+.|.+ .+.-|++-+ ..|+++.-+|-|+|+. |...++...+.--
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~P-----G~~~~~l~dal~~-~~~i~~i~~-~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG 85 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISP-----GSRSTPLALMMAE-HPILKIYVD-VDERSAGFFALGLAKASKRPVVLLCTSGTA 85 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECC-----CTTTHHHHHHHHH-CSSCEEEEC-SSHHHHHHHHHHHHHHHCCCEEEEECSSHH
T ss_pred HHHHHHHHHHHcCCCEEEECC-----CCccHHHHHHHHh-CCCceEEEe-cCcHHHHHHHHHHHHhhCCCEEEEECCchh
Confidence 456666655543 33333322 222 234455544 323466654 5999999999999986 6544444443333
Q ss_pred HHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCC--CCCCCCCchhHhHHHcCCCCcEEE--eeCCHH--------HH
Q psy10429 84 SMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAA--SGVAAQHSQCFGAWFTQCPGLKVV--SPYNSE--------DA 151 (207)
Q Consensus 84 ~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~--~g~~~hhs~~~~a~~~~iPgl~v~--~P~~~~--------e~ 151 (207)
...++.-|- ++. ..+.||++++.+-.. .+.+.+|..+..++++.+--.... .|.+.. .+
T Consensus 86 ~~N~~~gia-~A~--------~d~vPll~itG~~p~~~~g~~~~Qe~d~~~~~~~~tk~~~~v~~~~~~~~~~~~i~~~l 156 (578)
T 3lq1_A 86 AANYFPAVA-EAN--------LSQIPLIVLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHG 156 (578)
T ss_dssp HHTTHHHHH-HHH--------HTTCCEEEEEEECCGGGTTSSCTTCCCCTTTTGGGSSEEEECCCCCCSHHHHHHHHHHH
T ss_pred hhhhhHHHH-HHH--------hcCCCeEEEeCCCCHHhhcCCCCCCcCHhhHHhhheeeEeecCCCCCchHHHHHHHHHH
Confidence 444444443 333 568999998754332 244455555566788887666444 355533 24
Q ss_pred HHHHHHHHcC-CCcEEEEECc
Q psy10429 152 KGLLKAAIRD-PDPVVFLENE 171 (207)
Q Consensus 152 ~~ll~~a~~~-~~P~~i~~~k 171 (207)
+.+++.|..- ++||+|-.|+
T Consensus 157 ~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 157 SRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp HHHHHHHHSSSCCCEEEEEEC
T ss_pred HHHHHHhhCCCCCcEEEECcc
Confidence 4455555543 8999998774
No 46
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=92.80 E-value=2 Score=38.91 Aligned_cols=125 Identities=9% Similarity=0.001 Sum_probs=77.6
Q ss_pred hchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC
Q psy10429 37 VSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP 115 (207)
Q Consensus 37 ~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~ 115 (207)
+.+.+.+ . .-|++.+ ..|+++.-+|-|+|+. |...++..-+..-...++.-|- ++. ..+.||++++.
T Consensus 37 l~~al~~-~-~i~~i~~-~hE~~Aa~~A~Gyar~tg~pgv~~~TsGpG~~N~~~gi~-~A~--------~~~vPll~itg 104 (564)
T 2q28_A 37 MARHAQA-E-GIRYIGF-RHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALA-NAT--------VNGFPMIMISG 104 (564)
T ss_dssp HHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECSHHHHHHHHHHHH-HHH--------HHTCCEEEEEE
T ss_pred HHHHHHh-C-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEEccCchHHHHHHHHH-HHH--------hcCCCEEEEeC
Confidence 3444543 2 2466654 8999999999999997 5443444444333445555554 333 46899998875
Q ss_pred CCCCC--C--CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHH----HHHc-CCCcEEEEECcccc
Q psy10429 116 NGAAS--G--VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLK----AAIR-DPDPVVFLENELLY 174 (207)
Q Consensus 116 ~G~~~--g--~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~----~a~~-~~~P~~i~~~k~l~ 174 (207)
+-... + .+.+|..+..++++.+--..... .+++++...++ .|.. .++||+|-.|..+.
T Consensus 105 ~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~~~v-~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv~ 171 (564)
T 2q28_A 105 SSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRV-NQPQDLGIALARAIRVSVSGRPGGVYLDLPANVL 171 (564)
T ss_dssp ECCHHHHHTTSCCTTCCCHHHHHGGGSSEEEEC-CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHHH
T ss_pred CCCccccCCCCCccccccHHHHHHHhhheeeec-CCHHHHHHHHHHHHHHHhcCCCceEEEEcCHHHh
Confidence 43321 2 24455556678999887765554 44555555444 4444 47999998876654
No 47
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=92.68 E-value=0.67 Score=42.01 Aligned_cols=111 Identities=17% Similarity=0.182 Sum_probs=65.8
Q ss_pred CCceeeccc--hhHHHHHHHHHHHhcCCccEEEechhhHHH-HHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCC-CC
Q psy10429 47 DKRVLDTPI--TEIGFAGIAVGAAMAGLRPVCEFMTFNFSM-QAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAA-SG 121 (207)
Q Consensus 47 ~~r~~~~gI--aE~~~vg~A~GlA~~G~~pi~~~~~~~~~~-ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~-~g 121 (207)
|.++++.|. +-...++.|.|+|+..-++++.+.. |-.+ -.+..+ ..+. +.++|++++.. +++. .+
T Consensus 411 p~~~~~~g~~g~~G~~l~~AiGaa~a~~~~vv~i~G-DGsf~~~~~el-~ta~--------~~~l~~~ivv~NN~~~~~~ 480 (564)
T 2q28_A 411 PRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEG-DSAFGFSGMEI-ETIC--------RYNLPVTIVIFNNGGIYRG 480 (564)
T ss_dssp SSCEEESTTTTCTTCHHHHHHHHHHHHCSCEEEEEE-HHHHHTTGGGH-HHHH--------HTTCCEEEEEEECSBSSCS
T ss_pred CCeEecCCCCCcccchHHHHHHHhhcCCCcEEEEEc-chHhhccHHHH-HHHH--------HhCCCeEEEEEeCchhHHH
Confidence 567776543 2223578888888763455665553 2221 122222 2333 56889777754 3331 11
Q ss_pred CC------C-------CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 122 VA------A-------QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 122 ~~------~-------hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
.. . .+..++..+.+.+ |++-+...+++|++..++.+++.++|++|-
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~lie 539 (564)
T 2q28_A 481 DGVDLSGAGAPSPTDLLHHARYDKLMDAF-RGVGYNVTTTDELRHALTTGIQSRKPTIIN 539 (564)
T ss_dssp CCCCTTSSCCCCTTBCCTTCCGGGGGGGG-TCEEEEECSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHhccCCccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 10 0 1112344555555 788888899999999999999889999884
No 48
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=92.26 E-value=0.28 Score=44.18 Aligned_cols=112 Identities=21% Similarity=0.155 Sum_probs=66.9
Q ss_pred CCceeecc-chhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCC-C--
Q psy10429 47 DKRVLDTP-ITEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAA-S-- 120 (207)
Q Consensus 47 ~~r~~~~g-IaE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~-~-- 120 (207)
+.+|+..+ -+=-..++.|.|+|+.- -++++.+..-.-++..++.+. .++ +.++|++++.. ++.. .
T Consensus 392 ~~~~~~~~gg~~G~~l~~A~G~a~a~~~~~vv~~~GDG~~~~~~~~l~-~a~--------~~~l~~~ivv~nN~~~~~~~ 462 (528)
T 1q6z_A 392 PGSYYFCAAGGLGFALPAAIGVQLAEPERQVIAVIGDGSANYSISALW-TAA--------QYNIPTIFVIMNNGTYGALR 462 (528)
T ss_dssp SSCEEECTTCCTTSHHHHHHHHHHHCTTSCEEEEEEHHHHTTTGGGHH-HHH--------HHTCCCEEEEEECSBCHHHH
T ss_pred CCcEECCCCccccchHHHHHHHHHhCCCCcEEEEECCcHHHhhHHHHH-HHH--------HhCCCeEEEEEeCCcchHhH
Confidence 45666532 23345577888888763 356666553211122243332 333 45788777654 3322 1
Q ss_pred C------C----CC-CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 G------V----AA-QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 g------~----~~-hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
. . +. .+..++..+.+.+ |++-+...+++|.+..++.+++.++|++|-
T Consensus 463 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 520 (528)
T 1q6z_A 463 WFAGVLEAENVPGLDVPGIDFRALAKGY-GVQALKADNLEQLKGSLQEALSAKGPVLIE 520 (528)
T ss_dssp HHHHHHTCCSCCSCBCCCCCHHHHHHHH-TCEEEEESSHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHhcCCCcccCCCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCcEEEE
Confidence 0 0 01 1334555666666 788888899999999999999999999884
No 49
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=92.17 E-value=0.76 Score=41.64 Aligned_cols=114 Identities=14% Similarity=0.044 Sum_probs=72.0
Q ss_pred ceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCC----CCC
Q psy10429 49 RVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS----GVA 123 (207)
Q Consensus 49 r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~----g~~ 123 (207)
|++- ...|+++.-+|.|+|+. | .+++...+..-...++.-|- ++. ..+.||++++.+-... +..
T Consensus 44 ~~v~-~~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia-~A~--------~~~~Pll~itg~~~~~~~~~~~~ 112 (563)
T 2vk8_A 44 RWAG-NANELNAAYAADGYARIKG-MSCIITTFGVGELSALNGIA-GSY--------AEHVGVLHVVGVPSISAQAKQLL 112 (563)
T ss_dssp EECC-CSSHHHHHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHH-HHH--------HHTCCEEEEEEECCHHHHHTTCC
T ss_pred eEEc-cCchHHHHHHHHHHHHhhC-CcEEEEcCCCcHHHHHHHHH-HHH--------hhCCCEEEEECCCChHHhhcccc
Confidence 4544 68999999999999996 7 55555444333444555554 333 4689999986543321 112
Q ss_pred CCCc------hhHhHHHcCCCCcEEEeeCC----HHHHHHHHHHHHcCCCcEEEEECcccc
Q psy10429 124 AQHS------QCFGAWFTQCPGLKVVSPYN----SEDAKGLLKAAIRDPDPVVFLENELLY 174 (207)
Q Consensus 124 ~hhs------~~~~a~~~~iPgl~v~~P~~----~~e~~~ll~~a~~~~~P~~i~~~k~l~ 174 (207)
.||. |+...+++.+--..... .+ +.....+++.|...++||+|-.|+.+.
T Consensus 113 ~~~~~g~~~~q~~~~~~~~~~k~~~~v-~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d~~ 172 (563)
T 2vk8_A 113 LHHTLGNGDFTVFHRMSANISETTAMI-TDIATAPAEIDRCIRTTYVTQRPVYLGLPANLV 172 (563)
T ss_dssp CTTSCSSSCSSHHHHHHHTTCSEEEEC-CCTTTHHHHHHHHHHHHHHHTSCEEEEEETTGG
T ss_pred cccccCCcchHHHHHHhhhhEEEEEEe-CCHHHHHHHHHHHHHHHHhCCCCEEEEechhhh
Confidence 2332 34578999987655444 44 345556666666557999998886654
No 50
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=92.06 E-value=0.94 Score=41.09 Aligned_cols=125 Identities=15% Similarity=0.125 Sum_probs=75.4
Q ss_pred hchhhhhhcCCCceeeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC
Q psy10429 37 VSRGLWKKYGDKRVLDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP 115 (207)
Q Consensus 37 ~~~~l~~~~g~~r~~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~ 115 (207)
+.+.|.+. +.-|++ ....|+++..+|.|+|+. | ..++...+..-...++.-|.+ +. ..+.||++++.
T Consensus 32 l~~al~~~-~~i~~v-~~~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~-A~--------~~~vPll~itg 99 (566)
T 2vbi_A 32 LLDQLLLN-KDMKQI-YCCNELNCGFSAEGYARSNG-AAAAVVTFSVGAISAMNALGG-AY--------AENLPVILISG 99 (566)
T ss_dssp HHHHHHTC-TTSEEE-ECSSHHHHHHHHHHHHHHHS-CEEEEECTTTTHHHHHHHHHH-HH--------HTTCCEEEEEE
T ss_pred HHHHHhcC-CCCeEE-eeCcHHHHHHHHHHHHhhcC-CeEEEEeCCCCHHHHHHHHHH-HH--------hhCCCEEEEEC
Confidence 34445432 223454 478999999999999986 8 555554443334456666553 33 46899999875
Q ss_pred CCCC--CCCC--CCCc----h--hHhHHHcCCCCcEEEeeCCHHHHHH----HHHHHHcCCCcEEEEECcccc
Q psy10429 116 NGAA--SGVA--AQHS----Q--CFGAWFTQCPGLKVVSPYNSEDAKG----LLKAAIRDPDPVVFLENELLY 174 (207)
Q Consensus 116 ~G~~--~g~~--~hhs----~--~~~a~~~~iPgl~v~~P~~~~e~~~----ll~~a~~~~~P~~i~~~k~l~ 174 (207)
+-+. .+.+ .||. + +..++++.+--... .+.+++++.. +++.|...++||+|-.|....
T Consensus 100 ~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~~-~v~~~~~~~~~l~~A~~~a~~~~GPV~l~iP~d~~ 171 (566)
T 2vbi_A 100 APNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAE-SITDAHSAPAKIDHVIRTALRERKPAYLDIACNIA 171 (566)
T ss_dssp ECCGGGTTTTCBCTTSCSSSCCTHHHHHHHTTCSEEE-EECSSSSHHHHHHHHHHHHHHHTCCEEEEEETTTT
T ss_pred CCChHHhccCceeeeeccCcchHHHHHHHhhhEeEEE-EeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhhc
Confidence 4332 1222 2442 2 34699999866543 3344444444 444555457999998776544
No 51
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=91.91 E-value=0.41 Score=43.38 Aligned_cols=112 Identities=16% Similarity=0.146 Sum_probs=66.1
Q ss_pred CCceeeccc--hhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCC-C-
Q psy10429 47 DKRVLDTPI--TEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAA-S- 120 (207)
Q Consensus 47 ~~r~~~~gI--aE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~-~- 120 (207)
+.+++..+- +=-..++.|.|+++.. -++++.+..-.-++-.++.+- .++ +.++|++++.. +++. .
T Consensus 396 ~~~~~~~~~~g~mG~~l~~AiGaala~~~~~vv~i~GDGs~~~~~~~L~-ta~--------~~~l~~~ivv~nN~~~g~~ 466 (549)
T 3eya_A 396 KRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFL-SVV--------QMKLPVKIVVFNNSVLGFV 466 (549)
T ss_dssp SCEEECCTTTCCTTCHHHHHHHHHHHSTTSCEEEEEEHHHHHHTGGGHH-HHH--------HTTCCCEEEEEECSBCCCC
T ss_pred CCcEEeCCCCchhhhHHHHHHHHHHhCCCCcEEEEEccchhhccHHHHH-HHH--------HhCCCeEEEEEeCCccHHH
Confidence 456664311 1124678888888874 456666654211112233332 333 56788766644 3222 1
Q ss_pred -C----------CCCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 -G----------VAAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 -g----------~~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
. +...+..++..+.+.+ |++-+...+++|++..++.+++.++|++|-
T Consensus 467 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 524 (549)
T 3eya_A 467 AMEMKAGGYLTDGTELHDTNFARIAEAC-GITGIRVEKASEVDEALQRAFSIDGPVLVD 524 (549)
T ss_dssp ------------CCBCCCCCHHHHHHHT-TSEEEEECSGGGHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHhcCCCCcCCcCCCCCHHHHHHHc-CCcEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 0011223455666665 788888899999999999999999999884
No 52
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=91.78 E-value=0.4 Score=43.57 Aligned_cols=97 Identities=19% Similarity=0.226 Sum_probs=59.2
Q ss_pred HHHHHHHHhcCCccEEEechhhHH-HHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCC-C-CC------------CC
Q psy10429 61 AGIAVGAAMAGLRPVCEFMTFNFS-MQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAA-S-GV------------AA 124 (207)
Q Consensus 61 vg~A~GlA~~G~~pi~~~~~~~~~-~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~-~-g~------------~~ 124 (207)
++.|.|+++.--++++.+.. |-. +-.+..|- .+. +.++|++++.-+ ++. . +. ..
T Consensus 422 l~~A~Gaa~a~~~~vv~i~G-DGsf~~~~~eL~-ta~--------~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~ 491 (556)
T 3hww_A 422 LSTAAGVQRASGKPTLAIVG-DLSALYDLNALA-LLR--------QVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLM 491 (556)
T ss_dssp HHHHHHHHHHHCCCEEEEEE-HHHHHHTGGGHH-HHT--------TCSSCEEEEEEESCC-----------------CCC
T ss_pred HHHHHHHHhcCCCcEEEEEc-cHHhhhcchhhH-hhc--------ccCCCcEEEEEECCCCCcccCCCCcchhHHHhccC
Confidence 78888888863355665553 222 11222221 223 678998877543 331 1 10 01
Q ss_pred CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 125 QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 125 hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
.+..++..+.+.+ |++-+...+++|++.+++.+++.++|++|-
T Consensus 492 ~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 534 (556)
T 3hww_A 492 PQNVHFEHAAAMF-ELKYHRPQNWQELETAFADAWRTPTTTVIE 534 (556)
T ss_dssp CCCCCSHHHHHHT-TCEEECCSSHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCCCCHHHHHHHc-CCcEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 1222334454544 788888999999999999999999999883
No 53
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=91.62 E-value=0.42 Score=43.50 Aligned_cols=112 Identities=17% Similarity=0.061 Sum_probs=68.6
Q ss_pred CCceeecc--chhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCC--
Q psy10429 47 DKRVLDTP--ITEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAAS-- 120 (207)
Q Consensus 47 ~~r~~~~g--IaE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~-- 120 (207)
|.+++..+ -+=-..++.|+|+|+.- -++++.+..-.-++..++.+. .++ +.++|++++..+ ++..
T Consensus 410 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i~GDG~~~~~~~~L~-ta~--------~~~l~~~ivv~nN~~~~~~ 480 (566)
T 1ozh_A 410 ARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVSGDGGFLQSSMELE-TAV--------RLKANVLHLIWVDNGYNMV 480 (566)
T ss_dssp CSEEECCCTTCCTTCHHHHHHHHHHHSTTSEEEEEEEHHHHHHHTTHHH-HHH--------HHTCCEEEEEEECSBCHHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCCEEEEEcChHHhccHHHHH-HHH--------HhCCCcEEEEEECCchhHH
Confidence 56777532 12234577888888763 255665553211122344432 334 468897777543 3221
Q ss_pred C----------C-CCCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 G----------V-AAQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 g----------~-~~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+ . ...+..++..+.+.+ |++-+...+++|.+..++.+++.++|++|-
T Consensus 481 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 538 (566)
T 1ozh_A 481 AIQEEKKYQRLSGVEFGPMDFKAYAESF-GAKGFAVESAEALEPTLRAAMDVDGPAVVA 538 (566)
T ss_dssp HHHHHHHHSSCCSCBCCCCCHHHHHHTT-TSEEEECCSGGGHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHhcCCCccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 0 112234556777777 888888899999999999999999999884
No 54
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=91.27 E-value=4 Score=36.90 Aligned_cols=112 Identities=15% Similarity=0.070 Sum_probs=69.6
Q ss_pred eeccchhHHHHHHHHHHHhc-CCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCC----CCCCC
Q psy10429 51 LDTPITEIGFAGIAVGAAMA-GLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS----GVAAQ 125 (207)
Q Consensus 51 ~~~gIaE~~~vg~A~GlA~~-G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~----g~~~h 125 (207)
+-....|+++..+|.|+|+. | ..++...+..-...++.-|. ++. ..+.||++++.+-... +...|
T Consensus 66 ~i~~~~E~~A~~~A~GyAr~tG-~~v~~~tsGpG~~N~~~gi~-~A~--------~~~vPlv~itg~~~~~~~~~~~~~~ 135 (570)
T 2vbf_A 66 WIGNANELNASYMADGYARTKK-AAAFLTTFGVGELSAINGLA-GSY--------AENLPVVEIVGSPTSKVQNDGKFVH 135 (570)
T ss_dssp EEECSSHHHHHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHH-HHH--------HTTCCEEEEEEECCHHHHHHTCCCT
T ss_pred EECcCcHHHHHHHHHHHHHHhC-CeEEEEcCCCCHHHHHHHHH-HHh--------hhCCCEEEEeCCCCHHHhhccccce
Confidence 34578999999999999964 8 54444444344445566554 333 4689999987543321 11224
Q ss_pred Cc------hhHhHHHcCCCCcEEEeeCCHHHHHHH----HHHHHcCCCcEEEEECcccc
Q psy10429 126 HS------QCFGAWFTQCPGLKVVSPYNSEDAKGL----LKAAIRDPDPVVFLENELLY 174 (207)
Q Consensus 126 hs------~~~~a~~~~iPgl~v~~P~~~~e~~~l----l~~a~~~~~P~~i~~~k~l~ 174 (207)
|. ++...+++.+.-.....+. +++... ++.|...++||+|-.|....
T Consensus 136 ~~~~~~~~~~~~~~~~~~tk~~~~v~~--~~~~~~l~~A~~~A~~~~GPV~l~iP~d~~ 192 (570)
T 2vbf_A 136 HTLADGDFKHFMKMHEPVTAARTLLTA--ENATYEIDRVLSQLLKERKPVYINLPVDVA 192 (570)
T ss_dssp TSCSSSCCCHHHHHTGGGCSEEEECCT--TTHHHHHHHHHHHHHHHCCCEEEEEEHHHH
T ss_pred eeccccchHHHHHHhhhhEEEEEEECc--ccHHHHHHHHHHHHhhCCCCEEEEcchhhh
Confidence 42 1245888888766665554 555544 44555457999998776543
No 55
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=90.55 E-value=0.6 Score=42.85 Aligned_cols=112 Identities=11% Similarity=0.032 Sum_probs=68.1
Q ss_pred CCceeeccc--hhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCC-C-
Q psy10429 47 DKRVLDTPI--TEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAA-S- 120 (207)
Q Consensus 47 ~~r~~~~gI--aE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~-~- 120 (207)
+.+|+..+. +=...++.|.|+++.. -++++.+..-.-++..++.+ +.++ ..++|++++..+ +.. .
T Consensus 410 ~~~~~~~~~~g~~G~~l~~A~Gaala~~~~~vv~~~GDG~~~~~~~~l-~~a~--------~~~lp~~~vv~nN~~~~~~ 480 (603)
T 4feg_A 410 SNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDL-ATQV--------QYHLPVINVVFTNCQYGFI 480 (603)
T ss_dssp TCEEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEEEHHHHHHHGGGH-HHHH--------HTTCCCEEEEEECSBCHHH
T ss_pred CCceecCcccccccchhHHHhhHHHhCCCCcEEEEeccHHHhhhHHHH-HHHH--------HHCcCeEEEEEECCchHHH
Confidence 466776542 2234678888888875 35666555321122234443 2444 568898777543 322 1
Q ss_pred -----------CCC-CCCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHH--cCCCcEEEE
Q psy10429 121 -----------GVA-AQHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAI--RDPDPVVFL 168 (207)
Q Consensus 121 -----------g~~-~hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~--~~~~P~~i~ 168 (207)
..+ ..+..++..+.+.. |++-+.+.+++|++..++.+. +.++|++|-
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~~~gP~lIe 541 (603)
T 4feg_A 481 KDEQEDTNQNDFIGVEFNDIDFSKIADGV-HMQAFRVNKIEQLPDVFEQAKAIAQHEPVLID 541 (603)
T ss_dssp HHHHHHHCSSCCCSSBCCCCCHHHHHHHT-TCEEEEECBGGGHHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHhcCCCcccCcCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 001 11233445555555 777778889999999999999 889999883
No 56
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=90.37 E-value=0.85 Score=41.74 Aligned_cols=112 Identities=13% Similarity=-0.022 Sum_probs=66.1
Q ss_pred CCceeec-c-chhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCC-C-
Q psy10429 47 DKRVLDT-P-ITEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAA-S- 120 (207)
Q Consensus 47 ~~r~~~~-g-IaE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~-~- 120 (207)
|.+|+.. + =+=-..++.|.|+|++- -++++.+..-.-++..++.+. .++ +.++|++++.-+ +.. .
T Consensus 403 ~~~~~~~~~~g~mG~~l~~AiGaala~~~~~vv~i~GDG~~~~~~~~L~-ta~--------~~~l~~~ivv~NN~~~~~~ 473 (590)
T 1v5e_A 403 KNMWRTSPLFATMGIAIPGGLGAKNTYPDRQVWNIIGDGAFSMTYPDVV-TNV--------RYNMPVINVVFSNTEYAFI 473 (590)
T ss_dssp TSEEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEEEHHHHHHHGGGHH-HHH--------HTTCCCEEEEEECSSCTTG
T ss_pred CCeEEcCCCCCcccChHHHHHHHHHhCCCCeEEEEEechHHhchHHHHH-HHH--------HhCCCCEEEEEECCchHHH
Confidence 4667742 1 12234567888888763 355665553211222344332 334 567887777543 222 1
Q ss_pred C-C--C-------C-CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcC---CCcEEEE
Q psy10429 121 G-V--A-------A-QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRD---PDPVVFL 168 (207)
Q Consensus 121 g-~--~-------~-hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~---~~P~~i~ 168 (207)
. . . . .+..++..+.+.+ |++-+...+++|....++.+++. ++|++|-
T Consensus 474 ~~~q~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~gp~lie 534 (590)
T 1v5e_A 474 KNKYEDTNKNLFGVDFTDVDYAKIAEAQ-GAKGFTVSRIEDMDRVMAEAVAANKAGHTVVID 534 (590)
T ss_dssp GGTTSSSCCSCCCCCCCCCCHHHHHHHT-TSEEEEECBHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhcCCCccccCCCCCHHHHHHHc-CCEEEEECCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 1 0 0 0 1223455666666 88888889999999999999887 8999874
No 57
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=90.03 E-value=1.5 Score=40.28 Aligned_cols=112 Identities=17% Similarity=0.041 Sum_probs=67.9
Q ss_pred CCceeeccc-h-hHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC--
Q psy10429 47 DKRVLDTPI-T-EIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS-- 120 (207)
Q Consensus 47 ~~r~~~~gI-a-E~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~-- 120 (207)
|.+|++.|- . --..++.|.|+|+.- -++++.+..-.-++..++.+. .++ +.++|++++.. ++...
T Consensus 432 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i~GDGs~~~~~~~L~-ta~--------~~~l~~~ivv~NN~~~~~~ 502 (616)
T 2pan_A 432 DRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELA-VGA--------QFNIPYIHVLVNNAYLGLI 502 (616)
T ss_dssp TTSEEECTTTCCTTCHHHHHHHHHHHCTTCEEEEEEEHHHHHHTGGGHH-HHH--------HTTCCCEEEEEECSBCHHH
T ss_pred CCeEEcCCCcccccchHHHHHHHHHhCCCCcEEEEEcchhhhCCHHHHH-HHH--------HhCCCeEEEEEECCcchHH
Confidence 567888654 2 233788899988863 355665553211122344332 333 56788766643 33220
Q ss_pred --------CC--------C---CCC---chhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----CCCcEEEE
Q psy10429 121 --------GV--------A---AQH---SQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----DPDPVVFL 168 (207)
Q Consensus 121 --------g~--------~---~hh---s~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~~~P~~i~ 168 (207)
+. . ..| ..++..+.+.+ |++-+...+++|+...++.+++ .++|++|-
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~~gp~lIe 575 (616)
T 2pan_A 503 RQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGL-GCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVE 575 (616)
T ss_dssp HHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHT-TCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEEE
T ss_pred HHHHHHhcCCccccccccccccccCCCCCCCHHHHHHHc-CCeEEEECCHHHHHHHHHHHHhhcccCCCcEEEE
Confidence 00 0 011 13445666666 7888888999999999999998 79999873
No 58
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=89.67 E-value=4.7 Score=36.23 Aligned_cols=116 Identities=13% Similarity=0.020 Sum_probs=70.8
Q ss_pred eeeccchhHHHHHHHHHHHhcCCccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCC----CCCCC
Q psy10429 50 VLDTPITEIGFAGIAVGAAMAGLRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAAS----GVAAQ 125 (207)
Q Consensus 50 ~~~~gIaE~~~vg~A~GlA~~G~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~----g~~~h 125 (207)
-+-....|+++..+|.|+|+..-.+++...+..-...++.-|. ++. ..+.||++++.+-+.. +...|
T Consensus 45 ~~i~~~~E~~A~~~A~Gyar~tg~~v~~~tsGpG~~N~~~gv~-~A~--------~~~~Pll~itg~~p~~~~~~~~~~~ 115 (552)
T 1ovm_A 45 CWVGCANELNASYAADGYARCKGFAALLTTFGVGELSAMNGIA-GSY--------AEHVPVLHIVGAPGTAAQQRGELLH 115 (552)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHSCEEEEEETTHHHHHTHHHHH-HHH--------HTTCCEEEEEEECCHHHHHHTCCCT
T ss_pred eEEeeCcHHHHHHHHHHHHHhhCCcEEEEccCCcHHHHHHHHH-HHh--------hhcCCEEEEECCCCHHHHhcccccc
Confidence 3446789999999999999863355544444333444555544 333 5689999986542221 11223
Q ss_pred Cc------hhHhHHHcCCCCcEEEeeCC--HHHHHHHHHHHHcCCCcEEEEECcccc
Q psy10429 126 HS------QCFGAWFTQCPGLKVVSPYN--SEDAKGLLKAAIRDPDPVVFLENELLY 174 (207)
Q Consensus 126 hs------~~~~a~~~~iPgl~v~~P~~--~~e~~~ll~~a~~~~~P~~i~~~k~l~ 174 (207)
|. |+...+++.+--.....+.+ +.....+++.|...++||+|-.|+...
T Consensus 116 ~~~g~~~~q~~~~~~~~~tk~~~~v~~~~~~~~i~~A~~~a~~~~GPV~l~iP~d~~ 172 (552)
T 1ovm_A 116 HTLGDGEFRHFYHMSEPITVAQAVLTEQNACYEIDRVLTTMLRERRPGYLMLPADVA 172 (552)
T ss_dssp TSCSSSCCSHHHHHTGGGCSEEEECCTTTHHHHHHHHHHHHHHHTCCEEEEEEHHHH
T ss_pred cccCCCcHHHHHHHHHhheeEEEEEccccHHHHHHHHHHHHHhCCCCEEEEeehhhc
Confidence 32 34467888887776666541 344445555555446999998886554
No 59
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=89.65 E-value=0.93 Score=41.32 Aligned_cols=97 Identities=11% Similarity=0.101 Sum_probs=57.7
Q ss_pred HHHHHHHHHhcCCccEEEechh-hHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCCCCCCCC-C-C-C----------
Q psy10429 60 FAGIAVGAAMAGLRPVCEFMTF-NFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPNGAASGV-A-A-Q---------- 125 (207)
Q Consensus 60 ~vg~A~GlA~~G~~pi~~~~~~-~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~G~~~g~-~-~-h---------- 125 (207)
.++.|+|+|+.+ ++++.+..- .|.+ .+..+- .+. +.++|++++.-+-..+|. . . +
T Consensus 441 ~l~~AiGaa~~~-~~vv~i~GDGsf~~-~~~eL~-ta~--------~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~ 509 (578)
T 3lq1_A 441 VVSSALGASVVF-QPMFLLIGDLSFYH-DMNGLL-MAK--------KYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESL 509 (578)
T ss_dssp HHHHHHHHTTTS-SSEEEEEEHHHHHH-TGGGGH-HHH--------HTTCCEEEEEECCC--------------------
T ss_pred HHHHHHHHhcCC-CCEEEEEchHHHHh-hHHHHH-hhc--------cCCCCeEEEEEECCcCccccccccccccchhhhh
Confidence 478899998765 455555531 2221 222221 223 568898877654221111 0 0 0
Q ss_pred ----CchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 126 ----HSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 126 ----hs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+..++..+.+.+ |++-+...+++|++.+++.+++.++|++|-
T Consensus 510 ~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 555 (578)
T 3lq1_A 510 FGTSTELDFRFAAAFY-DADYHEAKSVDELEEAIDKASYHKGLDIIE 555 (578)
T ss_dssp -----CCCTHHHHHHT-TCEEEECCSHHHHHHHHHHHTTSSSEEEEE
T ss_pred ccCCCCCCHHHHHHHc-CCceEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 112333444444 778888899999999999999999999884
No 60
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=89.27 E-value=1 Score=40.84 Aligned_cols=111 Identities=18% Similarity=0.125 Sum_probs=66.5
Q ss_pred CCceeeccch--hHHHHHHHHHHHhcCCccEEEechhhHH-HHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCC-CC
Q psy10429 47 DKRVLDTPIT--EIGFAGIAVGAAMAGLRPVCEFMTFNFS-MQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAA-SG 121 (207)
Q Consensus 47 ~~r~~~~gIa--E~~~vg~A~GlA~~G~~pi~~~~~~~~~-~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~-~g 121 (207)
|.++++.|.. -...++.|.|+|+..-++++.+.. |-. +-.++.+- .+. +.++|++++.. +++. .+
T Consensus 416 p~~~~~~g~~g~~G~~l~~AiGaala~~~~vv~i~G-DGsf~~~~~el~-ta~--------~~~l~~~ivv~NN~~~~~~ 485 (568)
T 2c31_A 416 PRKRLDSGTWGVMGIGMGYCVAAAAVTGKPVIAVEG-DSAFGFSGMELE-TIC--------RYNLPVTVIIMNNGGIYKG 485 (568)
T ss_dssp TTCEEESTTTTCSSCHHHHHHHHHHHHCSCEEEEEE-HHHHHTTGGGHH-HHH--------HTTCCEEEEEEESSBSSCS
T ss_pred CCeEEcCCCCccccccHHHHHHHHhCCCCcEEEEEc-chHhhccHHHHH-HHH--------HhCCCeEEEEEeCchhHHH
Confidence 5667665431 223477888888763455665553 221 11222222 233 56889877754 3432 11
Q ss_pred CCC-----------CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 122 VAA-----------QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 122 ~~~-----------hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
... .+..++..+.+.+ |++-+...+++|++..++.+++.++|++|-
T Consensus 486 ~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~lie 542 (568)
T 2c31_A 486 NEADPQPGVISCTRLTRGRYDMMMEAF-GGKGYVANTPAELKAALEEAVASGKPCLIN 542 (568)
T ss_dssp CCCCSBTTBCCTTBCCCCCHHHHHHTT-TCEEEEESSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHhhcCCcccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 110 1223445566655 888888899999999999999889999884
No 61
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=89.21 E-value=0.29 Score=44.47 Aligned_cols=111 Identities=14% Similarity=0.016 Sum_probs=67.5
Q ss_pred CCceeec---cchhHHHHHHHHHHHhcC---CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCC
Q psy10429 47 DKRVLDT---PITEIGFAGIAVGAAMAG---LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAA 119 (207)
Q Consensus 47 ~~r~~~~---gIaE~~~vg~A~GlA~~G---~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~ 119 (207)
|.+++.. |.- -..++.|.|+|+.- -++++.+..-.-++..++.+. .++ +.++|++++.. ++..
T Consensus 409 ~~~~~~~~g~g~~-G~~l~~AiGaa~a~~~~~~~vv~i~GDG~~~~~~~~L~-ta~--------~~~l~~~ivv~nN~~~ 478 (563)
T 2uz1_A 409 PGGFLCHGYLGSM-GVGFGTALGAQVADLEAGRRTILVTGDGSVGYSIGEFD-TLV--------RKQLPLIVIIMNNQSW 478 (563)
T ss_dssp CSEEECCCTTCCT-TTHHHHHHHHHHHHHHHTCEEEEEEEHHHHGGGTTHHH-HHH--------HHTCCCEEEEEECSBC
T ss_pred CCeEECCCCCccc-cChHHHHHHHHHHhhCCCCeEEEEEccHHHhCCHHHHH-HHH--------HhCCCeEEEEEeCCcc
Confidence 5678762 222 35667888888753 355665553211112343332 333 45788776654 3322
Q ss_pred C----------CC-C---C-CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 120 S----------GV-A---A-QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 120 ~----------g~-~---~-hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
. +. . . .+..++..+.+.+ |++-+...+++|.+..++.+++.++|++|-
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 541 (563)
T 2uz1_A 479 GATLHFQQLAVGPNRVTGTRLENGSYHGVAAAF-GADGYHVDSVESFSAALAQALAHNRPACIN 541 (563)
T ss_dssp HHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHT-TCEEEEECSHHHHHHHHHHHHHSSSCEEEE
T ss_pred hHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCCEEEE
Confidence 0 00 0 0 1334556666666 888888899999999999999999999884
No 62
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=88.58 E-value=0.3 Score=44.88 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhcCCccEEEechh-hHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCCCC--CC----------
Q psy10429 59 GFAGIAVGAAMAGLRPVCEFMTF-NFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAASGV--AA---------- 124 (207)
Q Consensus 59 ~~vg~A~GlA~~G~~pi~~~~~~-~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~g~--~~---------- 124 (207)
..++.|+|+|+.--++++.+..- .|.+ .++.+ ..++ +.++|++++..+ ++. +. ..
T Consensus 459 ~~l~~AiGaala~~~~vv~i~GDGsf~~-~~~eL-~ta~--------~~~lp~~ivv~NN~~~-~i~~~~~~~q~~~~~~ 527 (604)
T 2x7j_A 459 GVVSSAMGVCEGTKAPVTLVIGDLSFYH-DLNGL-LAAK--------KLGIPLTVILVNNDGG-GIFSFLPQASEKTHFE 527 (604)
T ss_dssp SHHHHHHHHHHHHTSCEEEEEEHHHHHH-TGGGG-HHHH--------HHCCCEEEEEEECSSC-GGGGGSGGGSCHHHHH
T ss_pred cHHHHHHHHHhcCCCcEEEEEccHHHHh-HHHHH-HHhh--------hcCCCeEEEEEeCCCC-cccccCCCCccchhhH
Confidence 46788888888744566655532 1222 23322 2333 568898877643 322 11 00
Q ss_pred -----CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 125 -----QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 125 -----hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
.+..++..+.+.+ |++-+...+++|++..++.+++.++|++|-
T Consensus 528 ~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 575 (604)
T 2x7j_A 528 DLFGTPTGLDFKHAAALY-GGTYSCPASWDEFKTAYAPQADKPGLHLIE 575 (604)
T ss_dssp HHTTCCCCCCTHHHHHHT-TCEEECCSSHHHHHHHCCCCCSSCCEEEEE
T ss_pred hhccCCCCCCHHHHHHHc-CCeEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 1122344555555 888899999999999999998889999883
No 63
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=88.56 E-value=1 Score=40.64 Aligned_cols=112 Identities=13% Similarity=-0.021 Sum_probs=64.0
Q ss_pred CCceeecc--chhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC--
Q psy10429 47 DKRVLDTP--ITEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS-- 120 (207)
Q Consensus 47 ~~r~~~~g--IaE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~-- 120 (207)
+.+|+..+ -+=-..++.|.|+|+.. -++++.+..-.-++-.++.+- .++ +.++|++++.. ++...
T Consensus 398 ~~~~~~~~~~g~mG~~l~~A~G~a~a~~~~~vv~~~GDG~~~~~~~el~-ta~--------~~~l~~~ivv~nN~~~~~~ 468 (552)
T 1ovm_A 398 DVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELG-SML--------RDKQHPIILVLNNEGYTVE 468 (552)
T ss_dssp SCEEECCTTTCCTTHHHHHHHHHHHHCTTSCEEEEEEHHHHHHHTTHHH-HHH--------HTTCCCEEEEEESSSCHHH
T ss_pred CCeEEechhhHhhhhHHHHHHHHHHhCCCCcEEEEECchHHHhHHHHHH-HHH--------HhCCCCEEEEEECCCCeEE
Confidence 34565422 12234567888888763 255555553211122343333 333 56788777654 33321
Q ss_pred ----CCC----CCCchhHhHHHcCCCCc----EEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 ----GVA----AQHSQCFGAWFTQCPGL----KVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 ----g~~----~hhs~~~~a~~~~iPgl----~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+.. ..+..++..+.+.+ |+ +.+...+++|.+..++.+++.++|++|-
T Consensus 469 ~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~~~~~v~~~~~l~~al~~a~~~~gp~lie 527 (552)
T 1ovm_A 469 RAIHGAEQRYNDIALWNWTHIPQAL-SLDPQSECWRVSEAEQLADVLEKVAHHERLSLIE 527 (552)
T ss_dssp HHHSCTTCGGGCCCCCCGGGSTTTS-CSSCCEEEEEECBHHHHHHHHHHHTTCSSEEEEE
T ss_pred EeeccCCCCcccCCCCCHHHHHHHh-CCCcCCCEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 111 11223344555555 77 7788889999999999999889998873
No 64
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=88.50 E-value=0.98 Score=41.08 Aligned_cols=112 Identities=18% Similarity=0.064 Sum_probs=66.7
Q ss_pred CCceeec-cc-hhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC--
Q psy10429 47 DKRVLDT-PI-TEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS-- 120 (207)
Q Consensus 47 ~~r~~~~-gI-aE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~-- 120 (207)
|.+|+.. +. +=-..++.|.|+|+.. -++++.+..-.-++..++.+. .++ +.++|++++.. ++...
T Consensus 426 ~~~~~~~~g~g~mG~~l~~AiGaa~a~~~~~vv~i~GDG~~~~~~~~L~-~a~--------~~~l~~~ivv~NN~~~~~~ 496 (573)
T 2iht_A 426 PFGFLTSAGCSSFGYGIPAAIGAQMARPDQPTFLIAGDGGFHSNSSDLE-TIA--------RLNLPIVTVVVNNDTNGLI 496 (573)
T ss_dssp TTSEECCSSSCCTTCHHHHHHHHHHHSTTSCEEEEEEHHHHHHTGGGHH-HHH--------HHTCCCEEEEEECSBCHHH
T ss_pred CCeEEcCCCCcccccHHHHHHHHHHhCCCCcEEEEEccHHHHhHHHHHH-HHH--------HhCCCeEEEEEECCcchhh
Confidence 4677764 21 1234678888888763 255665553211122333332 333 46788766654 33221
Q ss_pred C--------C--C--CC-CchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 G--------V--A--AQ-HSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 g--------~--~--~h-hs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+ . + .. ...++..+.+.+ |++-+...+.+|++..++.+++.++|++|-
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 556 (573)
T 2iht_A 497 ELYQNIGHHRSHDPAVKFGGVDFVALAEAN-GVDATRATNREELLAALRKGAELGRPFLIE 556 (573)
T ss_dssp HHHHHHHHSSCCGGGTBCCCCCHHHHHHHT-TCEEEECCSHHHHHHHHHHHHTSSSCEEEE
T ss_pred HHHHHHhcCCCcCccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 1 0 0 11 112455666666 888888899999999999999999999884
No 65
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=86.12 E-value=1.8 Score=40.87 Aligned_cols=100 Identities=15% Similarity=0.114 Sum_probs=61.1
Q ss_pred HHHHHHHHHhcC---------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCC
Q psy10429 60 FAGIAVGAAMAG---------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAAS 120 (207)
Q Consensus 60 ~vg~A~GlA~~G---------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~ 120 (207)
-++.|.|+|++- -+.++.+..-.-++ -++|.+ +.++ ..++| ++++.-+ +...
T Consensus 160 gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal-~~A~--------~~~L~~livI~dnN~~~i 230 (711)
T 3uk1_A 160 GLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEAC-SLAG--------TLKLNKLIALYDDNGISI 230 (711)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHH-HHHH--------HTTCTTEEEEEEECSEET
T ss_pred HHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHH-HHHH--------HhCCCcEEEEEECCCccc
Confidence 366777777642 23455455422222 355655 3556 56887 6666544 3222
Q ss_pred CC--CCCCchhHhHHHcCCCCcEEEee---CCHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 121 GV--AAQHSQCFGAWFTQCPGLKVVSP---YNSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 121 g~--~~hhs~~~~a~~~~iPgl~v~~P---~~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
.+ +.....+....++.+ |++++.| .|.++...+++.|.+.++|++|.-
T Consensus 231 ~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~Al~~A~~~~~P~lI~v 283 (711)
T 3uk1_A 231 DGDVVNWFHDDTPKRFEAY-GWNVIPNVNGHDVDAIDAAIAKAKRSDKPSLICC 283 (711)
T ss_dssp TEEGGGTCCCCHHHHHHHT-TCEEEEEEETTCHHHHHHHHHHHTTCSSCEEEEE
T ss_pred ccchhhhcCCCHHHHHHHc-CCcEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 11 111234556778777 8888876 478999999999988899998853
No 66
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=85.64 E-value=3.1 Score=39.03 Aligned_cols=100 Identities=16% Similarity=0.081 Sum_probs=61.2
Q ss_pred HHHHHHHHHhcC---------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCC
Q psy10429 60 FAGIAVGAAMAG---------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAAS 120 (207)
Q Consensus 60 ~vg~A~GlA~~G---------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~ 120 (207)
-++.|.|+|++- -+.++.+..-.-++ -++|.+. .++ ..++| ++++.-+ +.+.
T Consensus 145 gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~-~A~--------~~~L~~livI~dnN~~~i 215 (690)
T 3m49_A 145 GIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASS-LAA--------HLQLGRLVVLYDSNDISL 215 (690)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHH-HHH--------HTTCTTEEEEEEECSBCS
T ss_pred cHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHH-HHH--------HhCCCeEEEEEECCCeec
Confidence 367777777752 23344445422222 3556553 555 56776 5555443 3332
Q ss_pred CCCC--CCchhHhHHHcCCCCcEEEee---CCHHHHHHHHHHHHc-CCCcEEEEE
Q psy10429 121 GVAA--QHSQCFGAWFTQCPGLKVVSP---YNSEDAKGLLKAAIR-DPDPVVFLE 169 (207)
Q Consensus 121 g~~~--hhs~~~~a~~~~iPgl~v~~P---~~~~e~~~ll~~a~~-~~~P~~i~~ 169 (207)
.... ....+....++.+ |++++.+ .|.++...+++.|.+ .++|++|.-
T Consensus 216 ~~~~~~~~~~d~~~~~~a~-G~~~~~v~DG~d~~~l~~Al~~a~~~~~~P~lI~v 269 (690)
T 3m49_A 216 DGDLNRSFSESVEDRYKAY-GWQVIRVEDGNDIEAIAKAIEEAKADEKRPTLIEV 269 (690)
T ss_dssp SSBGGGTCCCCHHHHHHHH-TCEEEEESCTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred ccchhhccchhHHHHHHHc-CCcEEEEecCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2211 2233455677777 9999999 688999999999988 699998853
No 67
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=84.54 E-value=1.1 Score=40.64 Aligned_cols=111 Identities=10% Similarity=-0.040 Sum_probs=61.9
Q ss_pred Cceeecc--chhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC--C
Q psy10429 48 KRVLDTP--ITEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS--G 121 (207)
Q Consensus 48 ~r~~~~g--IaE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~--g 121 (207)
.+|+..+ -+=-..++.|.|+|++- -++++.+..-.-++..++.+. .++ +.++|++++.. +++.. .
T Consensus 400 ~~~~~~~~~g~mG~~l~~A~G~ala~~~~~vv~~~GDG~~~~~~~eL~-ta~--------~~~l~~~ivv~nN~~~~~~~ 470 (566)
T 2vbi_A 400 ARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVA-QMV--------RYELPVIIFLINNRGYVIEI 470 (566)
T ss_dssp CEEECCTTTCCTTTHHHHHHHHHHTCTTSEEEEEEEHHHHHHHGGGHH-HHH--------HTTCCCEEEEEECSSCHHHH
T ss_pred CEEEecCcccchhhHHHHHHHHHHhCCCCcEEEEEcchHHHhhHHHHH-HHH--------HhCCCcEEEEEECCcceEEE
Confidence 4566421 12334568888888763 255665553211122343332 333 46788776654 33321 0
Q ss_pred C------CCCCchhHhHHHcCCCCc-----EEEeeCCHHHHHHHHHHHHcC-CCcEEEE
Q psy10429 122 V------AAQHSQCFGAWFTQCPGL-----KVVSPYNSEDAKGLLKAAIRD-PDPVVFL 168 (207)
Q Consensus 122 ~------~~hhs~~~~a~~~~iPgl-----~v~~P~~~~e~~~ll~~a~~~-~~P~~i~ 168 (207)
. ...+..++..+.+.+ |+ +-+...+++|.+..++.+++. ++|++|-
T Consensus 471 ~~~~~~~~~~~~~d~~~~a~a~-G~~~~~~~~~~v~~~~el~~al~~a~~~~~gp~lie 528 (566)
T 2vbi_A 471 AIHDGPYNYIKNWDYAGLMEVF-NAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIE 528 (566)
T ss_dssp TTSCCGGGCCCCCCTTTHHHHH-HTTTCCCEEEEECSHHHHHHHHHHHHHCCSSCEEEE
T ss_pred eeccCCccCCCCCCHHHHHHHc-CCCCCCccEEEeCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 0 011112333333333 44 666778999999999999987 9999884
No 68
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=84.53 E-value=3 Score=38.78 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=60.4
Q ss_pred HHHHHHHHHhcC------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCCCC-
Q psy10429 60 FAGIAVGAAMAG------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAASGV- 122 (207)
Q Consensus 60 ~vg~A~GlA~~G------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~g~- 122 (207)
-++.|.|+|++- -+.++.+..-.-++ -++|.+. .++ ..++| ++++.-+ +.+..+
T Consensus 119 gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~-~A~--------~~~L~~livi~nnN~~~i~~~ 189 (632)
T 3l84_A 119 GVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACS-LAG--------LHKLDNFILIYDSNNISIEGD 189 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHH-HHH--------HTTCTTEEEEEEECSEETTEE
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHH-HHH--------HcCCCcEEEEEECCCcccccc
Confidence 466777777642 23444455422222 4566653 555 56776 6655543 332211
Q ss_pred -CCCCchhHhHHHcCCCCcEEEeeC---CHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 123 -AAQHSQCFGAWFTQCPGLKVVSPY---NSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 123 -~~hhs~~~~a~~~~iPgl~v~~P~---~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
......+....++.+ |++++ +. |.++...+++.|.+.++|++|.-
T Consensus 190 ~~~~~~~d~~~~~~a~-G~~~~-~vdGhd~~~l~~al~~A~~~~~P~lI~v 238 (632)
T 3l84_A 190 VGLAFNENVKMRFEAQ-GFEVL-SINGHDYEEINKALEQAKKSTKPCLIIA 238 (632)
T ss_dssp GGGTCCCCHHHHHHHT-TCEEE-EEETTCHHHHHHHHHHHHTCSSCEEEEE
T ss_pred hhhhcChhHHHHHHHc-CCeEE-EEeeCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 112234556778887 99988 55 68889999999998899998853
No 69
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=84.51 E-value=3.7 Score=37.86 Aligned_cols=30 Identities=13% Similarity=0.071 Sum_probs=23.9
Q ss_pred CcEEE---eeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 139 GLKVV---SPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 139 gl~v~---~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
|++.+ ...|.++....++.|.+.++|++|.
T Consensus 247 G~~~~g~vdG~d~~~l~~al~~A~~~~gP~lI~ 279 (621)
T 2o1s_A 247 GFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLH 279 (621)
T ss_dssp TCEEEEEEETTCHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCeEeeeeCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 45544 4468999999999999999999874
No 70
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=83.33 E-value=4.8 Score=37.39 Aligned_cols=100 Identities=14% Similarity=0.032 Sum_probs=60.3
Q ss_pred HHHHHHHHHhcC---------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCC
Q psy10429 60 FAGIAVGAAMAG---------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAAS 120 (207)
Q Consensus 60 ~vg~A~GlA~~G---------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~ 120 (207)
-++.|.|+|++- -+.++.+..-.-++ -++|.+. .++ ..++| ++++.-+ +...
T Consensus 123 gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~-~A~--------~~~L~~li~i~~nN~~~i 193 (651)
T 2e6k_A 123 GISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAAS-LAG--------HWGLSKLIVFWDDNRISI 193 (651)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHH-HHH--------HTTCTTEEEEEEECCEET
T ss_pred hHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHH-HHH--------HcCCCeEEEEEECCCccc
Confidence 456677777651 23455455422233 3566553 555 46776 6666544 3322
Q ss_pred CC--CCCCchhHhHHHcCCCCcEEEeeC---CHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 121 GV--AAQHSQCFGAWFTQCPGLKVVSPY---NSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 121 g~--~~hhs~~~~a~~~~iPgl~v~~P~---~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
.. +.+.+.+....++.. |++++.+. |..+...+++.|.+.++|++|.-
T Consensus 194 ~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~al~~a~~~~~P~lI~~ 246 (651)
T 2e6k_A 194 DGPTDLAFTEDVLARYRAY-GWQTLRVEDVNDLEALRKAIKLAKLDERPTLIAV 246 (651)
T ss_dssp TEEGGGTCCSCHHHHHHHT-TCEEEEESCTTCHHHHHHHHHHHHHSSSCEEEEE
T ss_pred ccccccccCccHHHHHHhC-CCeEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 11 112234556777777 99988443 68899999999988899998753
No 71
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=83.05 E-value=2.8 Score=37.91 Aligned_cols=101 Identities=8% Similarity=-0.092 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhcCC-ccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC------CCC----CC
Q psy10429 58 IGFAGIAVGAAMAGL-RPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS------GVA----AQ 125 (207)
Q Consensus 58 ~~~vg~A~GlA~~G~-~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~------g~~----~h 125 (207)
-..++.|+|+|+.-. ++++.+..-.-++..++.+. .++ +.++|++++.. +++.. +.. ..
T Consensus 428 G~~l~~A~Gaala~~~~~vv~~~GDG~~~~~~~eL~-ta~--------~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~ 498 (570)
T 2vbf_A 428 GYTFPAALGSQIADKESRHLLFIGDGSLQLTVQELG-LSI--------REKLNPICFIINNDGYTVEREIHGPTQSYNDI 498 (570)
T ss_dssp TTHHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHH-HHH--------HTTCCCEEEEEESSSCHHHHHHSCTTCGGGCC
T ss_pred hhhHHHHHHHHHhCCCCcEEEEEcchhhhcCHHHHH-HHH--------HcCCCCEEEEEECCchHHHHHHhccCCCccCC
Confidence 345778888887632 55665553211122343332 333 56788777654 33321 101 11
Q ss_pred CchhHhHHHcCCCCcE-----EEeeCCHHHHHHHHHH-HHcCCCcEEEE
Q psy10429 126 HSQCFGAWFTQCPGLK-----VVSPYNSEDAKGLLKA-AIRDPDPVVFL 168 (207)
Q Consensus 126 hs~~~~a~~~~iPgl~-----v~~P~~~~e~~~ll~~-a~~~~~P~~i~ 168 (207)
+..++..+.+.+ |++ .+...+.+|++..++. +.+.++|++|-
T Consensus 499 ~~~d~~~~a~a~-G~~~~~~~~~~v~~~~el~~al~~a~~~~~~p~lie 546 (570)
T 2vbf_A 499 PMWNYSKLPETF-GATEDRVVSKIVRTENEFVSVMKEAQADVNRMYWIE 546 (570)
T ss_dssp CCCCGGGHHHHT-TCCTTTEEEEEECBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCHHHHHHHc-CCCcCCcceEEecCHHHHHHHHHHHHhcCCCcEEEE
Confidence 223444555554 555 6667899999999998 46779999883
No 72
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=83.05 E-value=3.3 Score=38.64 Aligned_cols=107 Identities=15% Similarity=0.060 Sum_probs=61.9
Q ss_pred eccchhHHHHHHHHHHHhcC---------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEE
Q psy10429 52 DTPITEIGFAGIAVGAAMAG---------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFR 113 (207)
Q Consensus 52 ~~gIaE~~~vg~A~GlA~~G---------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~ 113 (207)
.+|.-=+ -++.|.|+|++- -+.++.+..-.-++ -++|.+ +.++ ..++| ++++
T Consensus 114 ~tG~lG~-gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal-~~A~--------~~~L~~livi 183 (663)
T 3kom_A 114 TTGPLGQ-GVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEAC-SLAG--------TLGLNKLVAF 183 (663)
T ss_dssp CCCSTTH-HHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHH-HHHH--------HHTCTTEEEE
T ss_pred CCcchhh-HHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHH-HHHH--------HhCCCeEEEE
Confidence 4444433 356777777752 13455455422222 355555 3555 56887 5555
Q ss_pred eCC-CCCCCC--CCCCchhHhHHHcCCCCcEEEeeC---CHHHHHHHHHHHHc-CCCcEEEEE
Q psy10429 114 GPN-GAASGV--AAQHSQCFGAWFTQCPGLKVVSPY---NSEDAKGLLKAAIR-DPDPVVFLE 169 (207)
Q Consensus 114 ~~~-G~~~g~--~~hhs~~~~a~~~~iPgl~v~~P~---~~~e~~~ll~~a~~-~~~P~~i~~ 169 (207)
.-+ +.+..+ ......+....++.. |++++-+. |.++...+++.|.+ .++|++|.-
T Consensus 184 ~dnN~~~i~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~al~~A~~~~~~P~lI~~ 245 (663)
T 3kom_A 184 WDDNNISIDGDTKGWFSDNTPERFRAY-GWHVIENVDGHDFVAIEKAINEAHSQQQKPTLICC 245 (663)
T ss_dssp EEECC-----CGGGTCCCCHHHHHHHT-TCEEEEEEETTCHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred EECCCcccccchhhhcchhHHHHHHHC-CCeEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 443 333211 112234556778877 99988444 78899999999988 699998853
No 73
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=82.97 E-value=2.1 Score=38.80 Aligned_cols=101 Identities=10% Similarity=0.025 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCC---CC-----CCCCc
Q psy10429 58 IGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAAS---GV-----AAQHS 127 (207)
Q Consensus 58 ~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~---g~-----~~hhs 127 (207)
-..++.|.|+|++- -++++.+..-.-++..++.+. .+. +.++|++++..+ ++.. .. ...+.
T Consensus 416 G~~l~~A~G~ala~~~~~vv~i~GDGs~~~~~~el~-ta~--------~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~ 486 (568)
T 2wvg_A 416 GWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVA-QMV--------RLKLPVIIFLINNYGYTIEVMIHDGPYNNIKN 486 (568)
T ss_dssp TTHHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHH-HHH--------HTTCCCEEEEEECSSCHHHHTTSCCGGGCCCC
T ss_pred hhHHHHHHHHHHhCCCCcEEEEEcChhHhccHHHHH-HHH--------HcCCCcEEEEEECCcceEeeeeccCCCcCCCC
Confidence 35677888888763 355665553211122344433 333 467887766543 3321 00 01122
Q ss_pred hhHhHHHcCCCCc---------EEEeeCCHHHHHHHHHHHHcC-CCcEEEE
Q psy10429 128 QCFGAWFTQCPGL---------KVVSPYNSEDAKGLLKAAIRD-PDPVVFL 168 (207)
Q Consensus 128 ~~~~a~~~~iPgl---------~v~~P~~~~e~~~ll~~a~~~-~~P~~i~ 168 (207)
.++..+.+.+ |+ ..+...+.+|++..++.+++. ++|++|-
T Consensus 487 ~d~~~~a~a~-G~~~~~~~~~~~~~~v~~~~el~~al~~a~~~~~gp~lie 536 (568)
T 2wvg_A 487 WDYAGLMEVF-NGNGGYDSGAGKGLKAKTGGELAEAIKVALANTDGPTLIE 536 (568)
T ss_dssp CCHHHHHHHH-HCTTSSSCCCCEEEEESBHHHHHHHHHHHHHCCSSCEEEE
T ss_pred CCHHHHHHHh-CCCcccccCCcceEEeCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 2344444443 44 666778999999999999987 9999883
No 74
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=82.23 E-value=1.2 Score=40.58 Aligned_cols=112 Identities=14% Similarity=0.002 Sum_probs=65.4
Q ss_pred CCceeec-c-chhHHHHHHHHHHHhcC-CccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCC--
Q psy10429 47 DKRVLDT-P-ITEIGFAGIAVGAAMAG-LRPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAAS-- 120 (207)
Q Consensus 47 ~~r~~~~-g-IaE~~~vg~A~GlA~~G-~~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~-- 120 (207)
|.+|+.. | -+=-..++.|+|+|+.. -++++.+..-.-++..++.+. .++ +.++|++++..+ +...
T Consensus 414 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i~GDG~~~~~~~~L~-ta~--------~~~l~~~ivv~nN~~~~~~ 484 (589)
T 2pgn_A 414 PRRLVTSMAEGILGCGFPMALGAQLAEPNSRVFLGTGDGALYYHFNEFR-VAV--------EHKLPVITMVFTNESYGAN 484 (589)
T ss_dssp TTCEESCTTTCCTTCHHHHHHHHHHHCTTSCEEEEEEHHHHHHHGGGHH-HHH--------HTTCCCEEEEEECSBCHHH
T ss_pred CCcEECCCCcchhhhHHHHHHHHHHhCCCCcEEEEEeeHHHHhhHHHHH-HHH--------HhCCCeEEEEEECCCcccc
Confidence 4677764 2 11233568888888763 255665553211122343332 333 567887776543 3221
Q ss_pred C-------CC---C-CCchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 121 G-------VA---A-QHSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 121 g-------~~---~-hhs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+ .. . ....++..+.+.+ |++-+...+++|.+..++.+++.++|++|-
T Consensus 485 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 542 (589)
T 2pgn_A 485 WTLMNHQFGQNNWTEFMNPDWVGIAKAF-GAYGESVRETGDIAGALQRAIDSGKPALIE 542 (589)
T ss_dssp HHHHHHHHSSCCSCBCCCCCHHHHHHHH-TCEEEECTTTCCHHHHHHHHHHHCSCEEEE
T ss_pred hHHHHhhcCCCccccCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 00 1 1112344555555 777778889999999999999889999884
No 75
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=82.03 E-value=4.7 Score=37.19 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=23.9
Q ss_pred CcEEE---eeCCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 139 GLKVV---SPYNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 139 gl~v~---~P~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
|++.+ ...|.++....++.|.+.++|++|.
T Consensus 252 G~~~~g~vdG~d~~~l~~al~~A~~~~~P~lI~ 284 (629)
T 2o1x_A 252 GVRYVGPVDGHNVQELVWLLERLVDLDGPTILH 284 (629)
T ss_dssp TCEEEEEEESSCHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCeEEeeECCcCHHHHHHHHHHHHhcCCCEEEE
Confidence 45544 4458999999999998889999884
No 76
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=81.39 E-value=9.2 Score=35.67 Aligned_cols=86 Identities=9% Similarity=0.073 Sum_probs=52.5
Q ss_pred cEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCCCC--CCCCchhHhHHHcCCCCcEEE-ee-
Q psy10429 74 PVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAASGV--AAQHSQCFGAWFTQCPGLKVV-SP- 145 (207)
Q Consensus 74 pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~g~--~~hhs~~~~a~~~~iPgl~v~-~P- 145 (207)
.++.+..-.-++ .++|.+. .++ ..++| ++++.-+ +....+ ......+....++.. |+.++ .-
T Consensus 150 ~v~~~~GDG~~~eG~~~Eal~-~A~--------~~~L~~li~i~d~N~~~i~~~~~~~~~~d~~~~~~a~-G~~~~~~vd 219 (673)
T 1r9j_A 150 YTYVYCGDGCLMEGVCQEALS-LAG--------HLALEKLIVIYDSNYISIDGSTSLSFTEQCHQKYVAM-GFHVIEVKN 219 (673)
T ss_dssp CEEEEECHHHHHSHHHHHHHH-HHH--------HHTCTTEEEEEEECSBCSSSBGGGTCCCCHHHHHHHT-TCEEEEESC
T ss_pred EEEEEECcchhcccHHHHHHH-HHH--------HhCCCcEEEEEECCCCccccchhhccCHhHHHHHHHC-CCeEEEEeC
Confidence 444445432233 3466553 555 46776 6666543 333222 112234556777776 99998 44
Q ss_pred --CCHHHHHHHHHHHHc-CCCcEEEEE
Q psy10429 146 --YNSEDAKGLLKAAIR-DPDPVVFLE 169 (207)
Q Consensus 146 --~~~~e~~~ll~~a~~-~~~P~~i~~ 169 (207)
.|.++...+++.|.+ .++|++|.-
T Consensus 220 G~~d~~~l~~Al~~A~~~~~~P~lI~~ 246 (673)
T 1r9j_A 220 GDTDYEGLRKALAEAKATKGKPKMIVQ 246 (673)
T ss_dssp TTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 688999999999987 689998853
No 77
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=80.59 E-value=3.8 Score=35.38 Aligned_cols=102 Identities=20% Similarity=0.170 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhc----C-CccEEEechh-hHHH-HHHHHHHHHHhhhhhhccCCccCCEEEEeCC-CCCCCC--CCCCc-
Q psy10429 59 GFAGIAVGAAMA----G-LRPVCEFMTF-NFSM-QAIDHIINSAAKTFYMSAGTVNVPIVFRGPN-GAASGV--AAQHS- 127 (207)
Q Consensus 59 ~~vg~A~GlA~~----G-~~pi~~~~~~-~~~~-ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~~-G~~~g~--~~hhs- 127 (207)
.-+..|+|+|++ | -++++.+..- .|.+ ..+|.+ +.++ ..++|++++..+ +..... ....+
T Consensus 146 ~~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal-~~A~--------~~~lpvi~vv~NN~~gi~~~~~~~~~~ 216 (368)
T 1w85_A 146 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGI-NFAG--------AFKAPAIFVVQNNRFAISTPVEKQTVA 216 (368)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHH-HHHH--------HTTCCEEEEEEECSEETTEEGGGTCSC
T ss_pred ccccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHH-HHHH--------HHCcCEEEEEEcCCccceeccccccCC
Confidence 445667777765 2 2344444421 1221 233443 3455 568899888754 322111 11111
Q ss_pred hhHhHH--HcCCCCcEEEeeCCHHHHHHHHHHHHc----CCCcEEEEEC
Q psy10429 128 QCFGAW--FTQCPGLKVVSPYNSEDAKGLLKAAIR----DPDPVVFLEN 170 (207)
Q Consensus 128 ~~~~a~--~~~iPgl~v~~P~~~~e~~~ll~~a~~----~~~P~~i~~~ 170 (207)
.+.... --.+|++.| .=.|+.++...++.|++ .++|++|-..
T Consensus 217 ~d~~~~a~a~G~~~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lIe~~ 264 (368)
T 1w85_A 217 KTLAQKAVAAGIPGIQV-DGMDPLAVYAAVKAARERAINGEGPTLIETL 264 (368)
T ss_dssp SCSGGGGGGTTCCEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCHHHHHHHCCCCEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 112222 235666654 33479999999999986 6899998543
No 78
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=78.94 E-value=2.4 Score=38.44 Aligned_cols=142 Identities=8% Similarity=0.040 Sum_probs=75.5
Q ss_pred HHHHHHHHHHhc--CCcEEEEecCCCccCCchhhchhhhhhcCCCceeeccc--hhHHHHHHHHHHHhcC-CccEEEech
Q psy10429 6 ALNSALDEEMAR--DEKVFLLGEEVALYDGAYKVSRGLWKKYGDKRVLDTPI--TEIGFAGIAVGAAMAG-LRPVCEFMT 80 (207)
Q Consensus 6 a~~~~L~~~~~~--~~~vv~~~~D~~~~~g~~~~~~~l~~~~g~~r~~~~gI--aE~~~vg~A~GlA~~G-~~pi~~~~~ 80 (207)
.+...|.+.+.. +. ++ +..|++.+. +. ...+ .+.+|+..+- +=-..++.|+|+|+.- -++++.+..
T Consensus 378 ~v~~~l~~~l~~~~~~-iv-~~~d~G~~~--~~-~~~~----~~~~~~~~~~~g~mG~~l~~A~G~ala~~~~~vv~i~G 448 (565)
T 2nxw_A 378 DIARAVNDRVRAGQEP-LL-IAADMGDCL--FT-AMDM----IDAGLMAPGYYAGMGFGVPAGIGAQCVSGGKRILTVVG 448 (565)
T ss_dssp HHHHHHHHHHHTTCCC-CE-EEECSSHHH--HH-HTTS----CCSCEECCTTTCCTTCHHHHHHHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHHhcccccCC-EE-EEecchHHH--HH-HHhC----CCcEEEccCccccccccchHHHHHHHhCCCCcEEEEEe
Confidence 455667777765 33 32 244654321 11 1111 2456664321 1123466788887652 355555554
Q ss_pred hhHHHH-HHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC-----CC----CCCCchhHhHHHcCCCCcEEEeeCCHH
Q psy10429 81 FNFSMQ-AIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS-----GV----AAQHSQCFGAWFTQCPGLKVVSPYNSE 149 (207)
Q Consensus 81 ~~~~~r-a~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~-----g~----~~hhs~~~~a~~~~iPgl~v~~P~~~~ 149 (207)
|-.+. ..+.+ ..++ +.++|++++.. +++.. .. ...+..++..+.+.+ |++-+...+++
T Consensus 449 -DG~~~~~~~~l-~ta~--------~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~ 517 (565)
T 2nxw_A 449 -DGAFQMTGWEL-GNCR--------RLGIDPIVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGM-GGDGVRVRTRA 517 (565)
T ss_dssp -HHHHHHHGGGG-GGHH--------HHTCCCEEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGG-TSEEEEECBHH
T ss_pred -chHHHhhHHHH-HHHH--------HhCCCCEEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHc-CCCEEEeCCHH
Confidence 32221 12111 1222 45788776654 33321 00 011223455565655 78888889999
Q ss_pred HHHHHHHHHHcCCCcE-EE
Q psy10429 150 DAKGLLKAAIRDPDPV-VF 167 (207)
Q Consensus 150 e~~~ll~~a~~~~~P~-~i 167 (207)
|.+.+++.+++.++|+ +|
T Consensus 518 el~~al~~a~~~~gp~~li 536 (565)
T 2nxw_A 518 ELKAALDKAFATRGRFQLI 536 (565)
T ss_dssp HHHHHHHHHHHCCSSCEEE
T ss_pred HHHHHHHHHHhcCCCeEEE
Confidence 9999999999988998 44
No 79
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=78.28 E-value=9.1 Score=35.68 Aligned_cols=100 Identities=14% Similarity=0.056 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcC---------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccC-CEEEEeCC-CCCC
Q psy10429 60 FAGIAVGAAMAG---------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNV-PIVFRGPN-GAAS 120 (207)
Q Consensus 60 ~vg~A~GlA~~G---------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~-pvvi~~~~-G~~~ 120 (207)
-++.|.|+|++- -+.++.+..-.-++ -+++.+. .++ ..++ |++++.-+ +...
T Consensus 132 gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~-~A~--------~~~L~~li~i~~nN~~~i 202 (675)
T 1itz_A 132 GIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACS-LAG--------HWGLGKLIAFYDDNHISI 202 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHH-HHH--------HTTCTTEEEEEEECSEET
T ss_pred HHHHHHHHHHHhhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHH-HHH--------HhCCCcEEEEEECCCccC
Confidence 456677777652 23444455422233 3566653 555 4576 56666544 3322
Q ss_pred CC--CCCCchhHhHHHcCCCCcEEEeeC----CHHHHHHHHHHHHc-CCCcEEEEE
Q psy10429 121 GV--AAQHSQCFGAWFTQCPGLKVVSPY----NSEDAKGLLKAAIR-DPDPVVFLE 169 (207)
Q Consensus 121 g~--~~hhs~~~~a~~~~iPgl~v~~P~----~~~e~~~ll~~a~~-~~~P~~i~~ 169 (207)
.. +.+.+.+....++.. |++++.+. |.++...+++.|.+ .++|++|.-
T Consensus 203 ~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~~d~~~l~~al~~a~~~~~~P~lI~~ 257 (675)
T 1itz_A 203 DGDTEIAFTEDVSTRFEAL-GWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKV 257 (675)
T ss_dssp TEEGGGTCCSCHHHHHHHT-TCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred CCChhhhcChhHHHHHHhC-CCEEEEEecCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 11 112244556777777 99998443 78899999999987 689998853
No 80
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=77.02 E-value=4.6 Score=35.24 Aligned_cols=65 Identities=22% Similarity=0.197 Sum_probs=36.9
Q ss_pred CccCCEEEEeCC-CCCCCCC--CCCchh-HhHHHcCCCCcEEEe--eCCHHHHHHHHHHHHc----CCCcEEEEEC
Q psy10429 105 TVNVPIVFRGPN-GAASGVA--AQHSQC-FGAWFTQCPGLKVVS--PYNSEDAKGLLKAAIR----DPDPVVFLEN 170 (207)
Q Consensus 105 ~~~~pvvi~~~~-G~~~g~~--~hhs~~-~~a~~~~iPgl~v~~--P~~~~e~~~ll~~a~~----~~~P~~i~~~ 170 (207)
..++|++++..+ +...... ...+.. ........ |+.++. =.|+.++..+++.|++ .++|++|-..
T Consensus 210 ~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~-G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~ 284 (400)
T 2bfd_A 210 TLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAM 284 (400)
T ss_dssp HTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGG-TCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 457899888754 3222111 111212 22333332 555543 2478899999988886 6899988543
No 81
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=75.70 E-value=9.3 Score=35.65 Aligned_cols=100 Identities=12% Similarity=0.028 Sum_probs=58.6
Q ss_pred HHHHHHHHHhc----C-----------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCC
Q psy10429 60 FAGIAVGAAMA----G-----------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAAS 120 (207)
Q Consensus 60 ~vg~A~GlA~~----G-----------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~ 120 (207)
-++.|.|+|++ | -+.++.+..-.-++ -++|.+. .++ ..++| ++++.-+ +...
T Consensus 121 gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~-~A~--------~~~L~~li~i~~nN~~~i 191 (680)
T 1gpu_A 121 GISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASS-LAG--------HLKLGNLIAIYDDNKITI 191 (680)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHH-HHH--------HTTCTTEEEEEEECSEET
T ss_pred hHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHH-HHH--------HhCCCcEEEEEECCCceE
Confidence 45667777765 1 23444455422233 3556543 555 56776 6666543 3322
Q ss_pred CC--CCCCchhHhHHHcCCCCcEEEeeC----CHHHHHHHHHHHHc-CCCcEEEEE
Q psy10429 121 GV--AAQHSQCFGAWFTQCPGLKVVSPY----NSEDAKGLLKAAIR-DPDPVVFLE 169 (207)
Q Consensus 121 g~--~~hhs~~~~a~~~~iPgl~v~~P~----~~~e~~~ll~~a~~-~~~P~~i~~ 169 (207)
.. +...+.+....++.. |++++.+. |..+...+++.|.+ .++|++|.-
T Consensus 192 ~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~~d~~~l~~al~~A~~~~~~P~lI~~ 246 (680)
T 1gpu_A 192 DGATSISFDEDVAKRYEAY-GWEVLYVENGNEDLAGIAKAIAQAKLSKDKPTLIKM 246 (680)
T ss_dssp TEEGGGTCCCCHHHHHHHH-TCEEEEESCTTTCHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred ecccccccCccHHHHHHhc-CCeEEEEecCCCCHHHHHHHHHHHHHCCCCCEEEEE
Confidence 11 111233455677766 99988443 78899999999987 689998753
No 82
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=75.11 E-value=9.5 Score=35.49 Aligned_cols=101 Identities=17% Similarity=0.122 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhcC---------------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCC
Q psy10429 59 GFAGIAVGAAMAG---------------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAA 119 (207)
Q Consensus 59 ~~vg~A~GlA~~G---------------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~ 119 (207)
.-++.|.|+|+.- -+.++.+..-.-++ -++|.+. .++ ..++| ++++.-+ +..
T Consensus 118 ~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~-~A~--------~~~L~~li~i~~nN~~~ 188 (669)
T 2r8o_A 118 QGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCS-LAG--------TLKLGKLIAFYDDNGIS 188 (669)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHH-HHH--------HTTCTTEEEEEEECSEE
T ss_pred chHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHH-HHH--------HcCCCcEEEEEECCCcE
Confidence 3456666766641 23444455422233 3566653 555 46776 6666544 332
Q ss_pred CCC--CCCCchhHhHHHcCCCCcEEEee---CCHHHHHHHHHHHHc-CCCcEEEEE
Q psy10429 120 SGV--AAQHSQCFGAWFTQCPGLKVVSP---YNSEDAKGLLKAAIR-DPDPVVFLE 169 (207)
Q Consensus 120 ~g~--~~hhs~~~~a~~~~iPgl~v~~P---~~~~e~~~ll~~a~~-~~~P~~i~~ 169 (207)
... +...+.+....++.. |++++.+ .|..+...+++.|.+ .++|++|.-
T Consensus 189 i~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~al~~a~~~~~~P~lI~~ 243 (669)
T 2r8o_A 189 IDGHVEGWFTDDTAMRFEAY-GWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMC 243 (669)
T ss_dssp TTEEGGGTCCCCHHHHHHHT-TCEEEEEEETTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred eccccccccCccHHHHHHHC-CCeEEeEECCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 211 112234555677776 8888733 378999999999988 689998753
No 83
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=74.10 E-value=2.6 Score=38.13 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcC-C----ccEEEechhhHHHHHHHHHHHHHhhhhhhccCCccCCEEEEeC-CCCCC------CCC---
Q psy10429 59 GFAGIAVGAAMAG-L----RPVCEFMTFNFSMQAIDHIINSAAKTFYMSAGTVNVPIVFRGP-NGAAS------GVA--- 123 (207)
Q Consensus 59 ~~vg~A~GlA~~G-~----~pi~~~~~~~~~~ra~dqi~~~~a~~~~~~~~~~~~pvvi~~~-~G~~~------g~~--- 123 (207)
..++.|.|+|+.- . ++++.+..-.-++..++.+ ..++ +.++|++++.. +++.. +..
T Consensus 417 ~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~~~el-~ta~--------~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 487 (563)
T 2vk8_A 417 FTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEI-STMI--------RWGLKPYLFVLNNDGYTIQKLIHGPKAQY 487 (563)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHHGGGH-HHHH--------HTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred hHHHHHHHHHHhCcccCCCCCEEEEEcchHhhccHHHH-HHHH--------HcCCCcEEEEEECCcchhhhhhhCCCCCc
Confidence 4567777777652 1 5566555321112234433 2334 56888777654 33321 111
Q ss_pred -CCCchhHhHHHcCCCCcE---EEeeCCHHHHHHHHH-HHHcCC-CcEEEE
Q psy10429 124 -AQHSQCFGAWFTQCPGLK---VVSPYNSEDAKGLLK-AAIRDP-DPVVFL 168 (207)
Q Consensus 124 -~hhs~~~~a~~~~iPgl~---v~~P~~~~e~~~ll~-~a~~~~-~P~~i~ 168 (207)
..+..++..+.+.+ |++ .+.-.+++|...+++ .+++.+ +|++|-
T Consensus 488 ~~~~~~d~~~~a~a~-G~~~~~~~~v~~~~el~~al~~~a~~~~~~p~lie 537 (563)
T 2vk8_A 488 NEIQGWDHLSLLPTF-GAKDYETHRVATTGEWDKLTQDKSFNDNSKIRMIE 537 (563)
T ss_dssp GCCCCCCGGGHHHHT-TCSSEEEEEECBHHHHHHHHTCTTTTSCSSEEEEE
T ss_pred ccCCCCCHHHHHHHh-CCCCCcEEEecCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 01222344444444 555 777789999999999 788765 688873
No 84
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=72.53 E-value=8.5 Score=36.18 Aligned_cols=65 Identities=9% Similarity=-0.004 Sum_probs=43.0
Q ss_pred CccCC-EEEEeCC-CCCCCC--CCCCchhHhHHHcCCCCcEEEee---CCHHHHHHHHHHHHc-CCCcEEEEEC
Q psy10429 105 TVNVP-IVFRGPN-GAASGV--AAQHSQCFGAWFTQCPGLKVVSP---YNSEDAKGLLKAAIR-DPDPVVFLEN 170 (207)
Q Consensus 105 ~~~~p-vvi~~~~-G~~~g~--~~hhs~~~~a~~~~iPgl~v~~P---~~~~e~~~ll~~a~~-~~~P~~i~~~ 170 (207)
.+++| ++++.-+ +.+..+ ......+....++.. |+.++.- .|..+...+++.|.+ .++|++|.-.
T Consensus 194 ~~~L~nli~i~d~N~~si~~~~~~~~~~~~~~~~~a~-G~~~~~V~DG~D~~al~~Al~~A~~~~~~P~lI~~~ 266 (700)
T 3rim_A 194 VQQLGNLIVFYDRNQISIEDDTNIALCEDTAARYRAY-GWHVQEVEGGENVVGIEEAIANAQAVTDRPSFIALR 266 (700)
T ss_dssp HTTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHH-TCEEEEEECTTCHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred HcCCCcEEEEEECCCcccccchhhccchhHHHHHHHc-CCeEEEECCCCCHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 57886 7776543 333221 112234555677776 8888876 478888889999987 6899998543
No 85
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=68.02 E-value=18 Score=31.04 Aligned_cols=63 Identities=17% Similarity=0.193 Sum_probs=36.6
Q ss_pred CccCCEEEEeCCCCCCCCCCC-----CchhHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----CCCcEEEEE
Q psy10429 105 TVNVPIVFRGPNGAASGVAAQ-----HSQCFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----DPDPVVFLE 169 (207)
Q Consensus 105 ~~~~pvvi~~~~G~~~g~~~h-----hs~~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~~~P~~i~~ 169 (207)
..++|++++..+... |.++. .+.++.+-.-.+|++.| .=.|+.++..+++.|++ .++|++|-.
T Consensus 188 ~~~lpvi~vv~NN~~-g~~t~~~~~~~~~~~~~ra~g~p~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lIe~ 259 (365)
T 2ozl_A 188 LWKLPCIFICENNRY-GMGTSVERAAASTDYYKRGDFIPGLRV-DGMDILCVREATRFAAAYCRSGKGPILMEL 259 (365)
T ss_dssp HTTCCEEEEEEECSE-ETTEEHHHHCSCCCGGGTTTTSCEEEE-ETTCHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHCcCEEEEEECCCc-ccCCCcccccCCCCHHHHhCCCCEEEE-eCCCHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 568899988765321 21110 01112111124666554 33478999998888874 589999843
No 86
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=66.67 E-value=11 Score=32.84 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=35.3
Q ss_pred CccCCEEEEeCCCC-CCCCCC--C--CchhHhHHH--cCCCCcEEEeeCCHHHHHHHHHHHHc----CCCcEEEEE
Q psy10429 105 TVNVPIVFRGPNGA-ASGVAA--Q--HSQCFGAWF--TQCPGLKVVSPYNSEDAKGLLKAAIR----DPDPVVFLE 169 (207)
Q Consensus 105 ~~~~pvvi~~~~G~-~~g~~~--h--hs~~~~a~~--~~iPgl~v~~P~~~~e~~~ll~~a~~----~~~P~~i~~ 169 (207)
..++|++++..+.. ...... . .+.+..... -.+|++.| .=.|+.++...++.|++ .++|++|-.
T Consensus 229 ~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~V-dG~D~~av~~a~~~A~~~ar~~~gP~lIe~ 303 (407)
T 1qs0_A 229 VYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRV-DGNDFVAVYAASRWAAERARRGLGPSLIEW 303 (407)
T ss_dssp HHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred HHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 46889888765432 211111 1 111222222 24555443 23478888888888875 589998854
No 87
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=65.61 E-value=28 Score=34.89 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=30.4
Q ss_pred HhHHHcC--CCCcEEEee-CCHHHHHHHHHHHHcCCCcEEEE
Q psy10429 130 FGAWFTQ--CPGLKVVSP-YNSEDAKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 130 ~~a~~~~--iPgl~v~~P-~~~~e~~~ll~~a~~~~~P~~i~ 168 (207)
+..+.+. ++++....+ .++.|+...++.|++.++|++|-
T Consensus 1024 ~~~iA~a~G~~~va~~~v~~~~~~l~~al~eAl~~~GP~lI~ 1065 (1231)
T 2c42_A 1024 LARMVMTYGYVYVATVSMGYSKQQFLKVLKEAESFPGPSLVI 1065 (1231)
T ss_dssp HHHHHHTTSSSEEEEECTTTCHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHCCCCEEEEEeccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4444444 466666678 59999999999999999999873
No 88
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=61.68 E-value=12 Score=31.94 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=34.9
Q ss_pred CccCCEEEEeCCCCCCCCCCC----C-chhHhHHHc--CCCCcEEEeeCCHHHHHHHHHHHHc----CCCcEEEEE
Q psy10429 105 TVNVPIVFRGPNGAASGVAAQ----H-SQCFGAWFT--QCPGLKVVSPYNSEDAKGLLKAAIR----DPDPVVFLE 169 (207)
Q Consensus 105 ~~~~pvvi~~~~G~~~g~~~h----h-s~~~~a~~~--~iPgl~v~~P~~~~e~~~ll~~a~~----~~~P~~i~~ 169 (207)
..++|++++..+.. ++.++. . +.+...+.+ .+|++.| .-.|..++..+++.|++ .++|++|-.
T Consensus 192 ~~~lpvi~vv~NN~-~gi~~~~~~~~~~~d~~~~a~a~G~~~~~V-dg~d~~av~~a~~~A~~~a~~~~gP~lIe~ 265 (367)
T 1umd_A 192 VQGAPAVFIAENNF-YAISVDYRHQTHSPTIADKAHAFGIPGYLV-DGMDVLASYYVVKEAVERARRGEGPSLVEL 265 (367)
T ss_dssp HTTCSEEEEEEECS-EETTEEHHHHCSSSCSGGGGGGTTSCEEEE-ETTCHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HhCcCEEEEEecCC-eeeccChhhccCCCCHHHHHHHcCCcEEEe-CCCCHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 56889888776432 232211 1 112223333 4566654 45677777666666554 689998854
No 89
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=56.48 E-value=18 Score=33.33 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=52.7
Q ss_pred HHHHHHHHHhcC------CccEEEechhhHHH--HHHHHHHHHHhhhhhhccCCccCC-EEEEeCC-CCCCCC--CCCCc
Q psy10429 60 FAGIAVGAAMAG------LRPVCEFMTFNFSM--QAIDHIINSAAKTFYMSAGTVNVP-IVFRGPN-GAASGV--AAQHS 127 (207)
Q Consensus 60 ~vg~A~GlA~~G------~~pi~~~~~~~~~~--ra~dqi~~~~a~~~~~~~~~~~~p-vvi~~~~-G~~~g~--~~hhs 127 (207)
-++.|.|+|++. -+.++.+..-.-++ -++|.+ +.++ ..++| ++++.-+ +..... ....+
T Consensus 126 gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~~~eG~~~Eal-~~A~--------~~~l~~livi~nnN~~~i~~~~~~~~~ 196 (616)
T 3mos_A 126 GLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAM-AFAS--------IYKLDNLVAILDINRLGQSDPAPLQHQ 196 (616)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCEEEEEETGGGGSHHHHHHH-HHHH--------HTTCTTEEEEEEECSBCSSSBCTTTTC
T ss_pred ccHHHHHHHHHHHHhCCCCCEEEEEECccccccCcHHHHH-HHHH--------HcCCCcEEEEEECCCCCCcCCcccccC
Confidence 467777877752 13445455321122 455554 3555 56776 4444433 333222 11222
Q ss_pred -hhHhHHHcCCCCcEEEeeC---CHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 128 -QCFGAWFTQCPGLKVVSPY---NSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 128 -~~~~a~~~~iPgl~v~~P~---~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
.+....++.+ |++++ +. |.++...+++.+ .++|++|.-
T Consensus 197 ~~~~~~~~~a~-G~~~~-~VdG~d~~~l~~al~~~--~~~P~lI~v 238 (616)
T 3mos_A 197 MDIYQKRCEAF-GWHAI-IVDGHSVEELCKAFGQA--KHQPTAIIA 238 (616)
T ss_dssp HHHHHHHHHHT-TCEEE-EEETTCHHHHHHHHHSC--CSSCEEEEE
T ss_pred hHHHHHHHHHc-CCeEE-EEcCCCHHHHHHHHHhc--CCCCEEEEE
Confidence 2345677777 88877 54 566766666554 588998853
No 90
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=53.76 E-value=34 Score=33.24 Aligned_cols=109 Identities=13% Similarity=-0.005 Sum_probs=57.1
Q ss_pred eeccchhHHHHHHHHHHHhc----C-----CccEEEechhhHHH----HHHHHHHHHHhhhhhhccCCccCC---EEEEe
Q psy10429 51 LDTPITEIGFAGIAVGAAMA----G-----LRPVCEFMTFNFSM----QAIDHIINSAAKTFYMSAGTVNVP---IVFRG 114 (207)
Q Consensus 51 ~~~gIaE~~~vg~A~GlA~~----G-----~~pi~~~~~~~~~~----ra~dqi~~~~a~~~~~~~~~~~~p---vvi~~ 114 (207)
+|.+..++. +.+|.|+|++ + ...++..+..|-.. .++|.+ |.++ ..++| ++++.
T Consensus 318 ~~~shlg~~-~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Eal-n~A~--------~~~lp~gg~I~vv 387 (933)
T 2jgd_A 318 FNPSHLEIV-SPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETL-NMSK--------ARGYEVGGTVRIV 387 (933)
T ss_dssp CCCSSTTCH-HHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHH-HHTT--------STTTCCSCCEEEE
T ss_pred ccCcccccc-cCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHH-HHhh--------ccCCCCCceEEEE
Confidence 455555554 6778888875 1 22233333334332 445554 3455 66888 77665
Q ss_pred CC-CCCCCC-CCC--Cch---hHhHHHcCCCCcEEEeeCCHHHHHHHHHHHHc----CCCcEEEEEC
Q psy10429 115 PN-GAASGV-AAQ--HSQ---CFGAWFTQCPGLKVVSPYNSEDAKGLLKAAIR----DPDPVVFLEN 170 (207)
Q Consensus 115 ~~-G~~~g~-~~h--hs~---~~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~----~~~P~~i~~~ 170 (207)
.+ +..... ... .+. .+.+-.-.+|.+.| -=.|++++..+++.|.+ .++|++|-..
T Consensus 388 ~nN~~~ist~~~~~~~~~~~~~~~a~a~g~p~~~V-dG~D~~av~~a~~~A~e~~r~~~~P~lIe~~ 453 (933)
T 2jgd_A 388 INNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHV-NADDPEAVAFVTRLALDFRNTFKRDVFIDLV 453 (933)
T ss_dssp EECC---------------CGGGGGGTTTCCEEEE-ETTCHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EeCCccccCCCHHhcccchhHHHHHHHcCCCEEEE-CCCCHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 54 433222 111 221 22233345666555 56678888888888874 4889887543
No 91
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=49.27 E-value=15 Score=34.08 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=32.0
Q ss_pred HHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 132 AWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 132 a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
+.++.+|.. |+.|.+.+|+..+++.|-+.+-|++.|-.
T Consensus 200 g~~~~~P~a-VV~P~s~eeV~~iv~~A~~~~ipVvprGg 237 (658)
T 4bby_A 200 GMFERIPDI-VLWPTCHDDVVKIVNLACKYNLCIIPIGG 237 (658)
T ss_dssp SCCSCCCSE-EEECCSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CcccCCcCE-EEeeCCHHHHHHHHHHHHHCCCeEEEECC
Confidence 345567754 88999999999999999999999999843
No 92
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=40.90 E-value=1.3e+02 Score=24.11 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=54.9
Q ss_pred chhhhhhcCCCceeec-cch----hHHHHHHHHHHHhcCCccEEEech----hh-HHHHHHHHHHHHHhhhhhhccCCcc
Q psy10429 38 SRGLWKKYGDKRVLDT-PIT----EIGFAGIAVGAAMAGLRPVCEFMT----FN-FSMQAIDHIINSAAKTFYMSAGTVN 107 (207)
Q Consensus 38 ~~~l~~~~g~~r~~~~-gIa----E~~~vg~A~GlA~~G~~pi~~~~~----~~-~~~ra~dqi~~~~a~~~~~~~~~~~ 107 (207)
..++.++| |+||+-+ +|. |...--+.- +...|++-+-.... .. .-...++.+..-+. ..+
T Consensus 82 ~~~~~~~~-p~r~~~~~~v~p~~~~~a~~eL~~-~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~--------e~g 151 (291)
T 3irs_A 82 VAAVAKAY-PDKFHPVGSIEAATRKEAMAQMQE-ILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCE--------DNG 151 (291)
T ss_dssp HHHHHHHS-TTTEEEEEECCCSSHHHHHHHHHH-HHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHH--------HTT
T ss_pred HHHHHHHC-CCcEEEEEecCccCHHHHHHHHHH-HHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH--------HcC
Confidence 45677899 6887643 121 333333334 45557766655421 11 12356666665555 578
Q ss_pred CCEEEEeCCCCCCCCCCCCchhHhHHHcCCCCcEEEeeC
Q psy10429 108 VPIVFRGPNGAASGVAAQHSQCFGAWFTQCPGLKVVSPY 146 (207)
Q Consensus 108 ~pvvi~~~~G~~~g~~~hhs~~~~a~~~~iPgl~v~~P~ 146 (207)
+||++.............+......+++..|+++++..-
T Consensus 152 lpv~iH~~~~~~~~~~~~~p~~~~~v~~~~P~l~ivl~H 190 (291)
T 3irs_A 152 IPVIMMTGGNAGPDITYTNPEHIDRVLGDFPDLTVVSSH 190 (291)
T ss_dssp CCEEEECSSSCSSSGGGGCHHHHHHHHHHCTTCCEEEEG
T ss_pred CeEEEeCCCCCCCCCccCCHHHHHHHHHHCCCCEEEeec
Confidence 999887643211111111223456899999999987643
No 93
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=36.73 E-value=32 Score=28.81 Aligned_cols=30 Identities=27% Similarity=0.499 Sum_probs=27.0
Q ss_pred EEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 141 KVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 141 ~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
-|+.|.|.+|+..+++.|-+.+-|++++-.
T Consensus 51 ~vv~P~s~eev~~~l~~a~~~~~pv~~~Gg 80 (326)
T 1hsk_A 51 FYITPTKNEEVQAVVKYAYQNEIPVTYLGN 80 (326)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 588999999999999999999999998743
No 94
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=34.88 E-value=38 Score=28.47 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=26.9
Q ss_pred EEEeeCCHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 141 KVVSPYNSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 141 ~v~~P~~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
-++.|.+.+|+..+++.|-+.+-|++++-
T Consensus 57 ~vv~P~s~eev~~~v~~a~~~~~pv~v~G 85 (322)
T 3tx1_A 57 VFVMPKTIEEAQEVVAYCHQNKIPLTILG 85 (322)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 68999999999999999999999999874
No 95
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=32.10 E-value=2e+02 Score=27.69 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHHHcC-CCcEEEEE
Q psy10429 147 NSEDAKGLLKAAIRD-PDPVVFLE 169 (207)
Q Consensus 147 ~~~e~~~ll~~a~~~-~~P~~i~~ 169 (207)
|..+...+++.|.+. ++|++|.-
T Consensus 365 D~~~l~~a~~~A~~~~~~PtlI~~ 388 (886)
T 2qtc_A 365 DPKKIYAAFKKAQETKGKATVILA 388 (886)
T ss_dssp CHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCEEEEE
Confidence 677777788888875 58998853
No 96
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=30.07 E-value=52 Score=27.82 Aligned_cols=29 Identities=17% Similarity=0.283 Sum_probs=26.3
Q ss_pred EEEeeCCHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 141 KVVSPYNSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 141 ~v~~P~~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
.++.|.|.+|+..++++|-+.+-|++++-
T Consensus 17 ~~v~p~s~eel~~~l~~a~~~~~pv~vlG 45 (340)
T 1uxy_A 17 HIVCAEDEQQLLNAWQYATAEGQPVLILG 45 (340)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCCEEEES
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 57899999999999999999999998863
No 97
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=25.68 E-value=65 Score=28.41 Aligned_cols=31 Identities=6% Similarity=-0.016 Sum_probs=28.2
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
.-|+.|.+.+|+..+++.|-+.+-|+.+|-.
T Consensus 38 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 38 TAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3689999999999999999999999999854
No 98
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=24.42 E-value=53 Score=29.08 Aligned_cols=30 Identities=20% Similarity=0.146 Sum_probs=27.2
Q ss_pred EEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 141 KVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 141 ~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
-|+.|.+.+|+..+++.|-+.+-|++++-.
T Consensus 54 ~vv~P~s~eeV~~~v~~a~~~~~pv~~~Gg 83 (476)
T 3pm9_A 54 LVLRPGSTEEVVAICKLANEARVALVPQGG 83 (476)
T ss_dssp CEECCCSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred EEEecCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 578999999999999999999999999843
No 99
>2a6q_A Antitoxin YEFM; YEFM, antitoxin, addiction modules, RNAse, inhibitor, toxin inhibitor/toxin complex; 2.05A {Escherichia coli} SCOP: d.306.1.1
Probab=24.20 E-value=45 Score=21.96 Aligned_cols=31 Identities=16% Similarity=0.386 Sum_probs=24.2
Q ss_pred CCcEEEeeCCHHH-HHHHHHHHHcCCCcEEEE
Q psy10429 138 PGLKVVSPYNSED-AKGLLKAAIRDPDPVVFL 168 (207)
Q Consensus 138 Pgl~v~~P~~~~e-~~~ll~~a~~~~~P~~i~ 168 (207)
|+|+++..++... +..+++.+.++..|++|.
T Consensus 2 ~~M~~v~~~e~r~~l~~~~~~v~~~~epviIt 33 (86)
T 2a6q_A 2 PHMRTISYSEARQNLSATMMKAVEDHAPILIT 33 (86)
T ss_dssp CCSEEEEHHHHHHTHHHHHHHHHHHTCCEEEE
T ss_pred CCCeEECHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 6788887777654 677888888878899885
No 100
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=23.79 E-value=70 Score=28.47 Aligned_cols=31 Identities=6% Similarity=0.141 Sum_probs=28.3
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
.-|+.|.+.+|+..+++.|.+.+-|+.+|..
T Consensus 47 ~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 47 SAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp SEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4689999999999999999999999999854
No 101
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function, hydrolase activator; 2.55A {Caulobacter vibrioides} PDB: 2qaz_A
Probab=23.70 E-value=84 Score=23.77 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhcC----CcEEEEecCCCccCCchhhchhhhhhcCC-------CceeeccchhHHHHHHHHHHHhcC
Q psy10429 3 VRDALNSALDEEMARD----EKVFLLGEEVALYDGAYKVSRGLWKKYGD-------KRVLDTPITEIGFAGIAVGAAMAG 71 (207)
Q Consensus 3 ~~~a~~~~L~~~~~~~----~~vv~~~~D~~~~~g~~~~~~~l~~~~g~-------~r~~~~gIaE~~~vg~A~GlA~~G 71 (207)
||..+.++|.+..+.. ...+.++=+.. .-|+ .+.+.|+++||. .+|+|.-+.|.+ ...+|+-.|
T Consensus 24 lrgVvr~vL~~va~~g~LPg~HHFyITF~T~-~pGV-~i~d~L~~~YP~EMTIVLQhQF~dL~V~e~~---FsV~LsFgg 98 (157)
T 2qas_A 24 LRGVVKAALKKAAAPGGLPEPHHLYITFKTK-AAGV-SGPQDLLSKYPDEMTIVLQHQYWDLAPGETF---FSVTLKFGG 98 (157)
T ss_dssp HHHHHHHHHHHHSSTTCSCTTCCEEEEEETT-STTC-BCCHHHHHHSSSEEEEEESSSCEEEEECSSE---EEEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCCCCccEEEEEEecC-CCCc-cCCHHHHhhCCCceEEEEEeeecCcEEecCc---EEEEEEeCC
Confidence 7888999999988876 44677776543 3355 577899999954 589999999987 667777777
Q ss_pred CccEEEech
Q psy10429 72 LRPVCEFMT 80 (207)
Q Consensus 72 ~~pi~~~~~ 80 (207)
..--+.+.+
T Consensus 99 ~pe~L~IPf 107 (157)
T 2qas_A 99 QPKRLSVPY 107 (157)
T ss_dssp EEEEEEEEG
T ss_pred eeeEEEeeh
Confidence 644444443
No 102
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=23.20 E-value=75 Score=28.29 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=29.4
Q ss_pred CCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 136 QCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 136 ~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
..|. -|+.|.+.+|+..+++.|.+.+-|+.+|-.
T Consensus 33 ~~P~-~vv~P~s~~dV~~~v~~a~~~~~~v~vrgg 66 (501)
T 3pop_A 33 VEPE-EFFLPATPDDVVASLQKAVTEGRGVACRSG 66 (501)
T ss_dssp CCCS-EEEECSSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCC-EEEEeCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 3454 588999999999999999999999999854
No 103
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=21.57 E-value=85 Score=28.09 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=28.0
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
.-|+.|.+.+|+..+++.|.+.+-|+.+|-.
T Consensus 60 ~~vv~p~s~~dv~~~v~~a~~~~~~v~v~gg 90 (530)
T 2y3s_A 60 EEIHLVGSAAEIEQVLSRAVRSGKRVAVRSG 90 (530)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 4588999999999999999999999999854
No 104
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=20.92 E-value=71 Score=28.40 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=27.1
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
--|+.|.+.+|+..+++.|-+.+-|++++-
T Consensus 58 ~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g 87 (520)
T 1wvf_A 58 SAAVTATTVEQVQGVVKICNEHKIPIWTIS 87 (520)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHTCCEEEES
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 358899999999999999999999999974
No 105
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=20.83 E-value=1.3e+02 Score=23.23 Aligned_cols=73 Identities=21% Similarity=0.332 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHhcC----CcEEEEecCCCccCCchhhchhhhhhcCC-------CceeeccchhHHHHHHHHHHHhcC
Q psy10429 3 VRDALNSALDEEMARD----EKVFLLGEEVALYDGAYKVSRGLWKKYGD-------KRVLDTPITEIGFAGIAVGAAMAG 71 (207)
Q Consensus 3 ~~~a~~~~L~~~~~~~----~~vv~~~~D~~~~~g~~~~~~~l~~~~g~-------~r~~~~gIaE~~~vg~A~GlA~~G 71 (207)
||..+.++|.+..+.. ...+.++=+.. .-|+ .+...|+++||. .+|+|.-+.|.+ ...+|+-.|
T Consensus 16 lrgVvr~vL~~va~~g~LPg~HHFyITF~T~-~pGV-~i~~~L~~~YP~EMTIVLQhQF~dL~V~e~~---FsV~LsFgg 90 (176)
T 2nys_A 16 LRGVIRKVLGEVAATGRLPGDHHFFITFLTG-APGV-RISQHLKSKYAEQMTIVIQHQFWDMKVTETG---FEIGLSFSD 90 (176)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTCCEEEEEESS-STTC-BCCHHHHHHSSSEEEEEESSSCEEEEECSSE---EEEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCCCCccEEEEEEecC-CCCc-cCCHHHHhhCCCceEEEEEeeecCcEEecCc---EEEEEEeCC
Confidence 7888999999998877 44577776543 3355 577899999953 589999999987 677888888
Q ss_pred CccEEEech
Q psy10429 72 LRPVCEFMT 80 (207)
Q Consensus 72 ~~pi~~~~~ 80 (207)
..--+.+.+
T Consensus 91 ~pe~L~IPf 99 (176)
T 2nys_A 91 TPEKLVIPY 99 (176)
T ss_dssp EEEEEEEEG
T ss_pred eeeEEEeeh
Confidence 754444444
No 106
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=20.82 E-value=66 Score=28.98 Aligned_cols=36 Identities=17% Similarity=0.112 Sum_probs=30.0
Q ss_pred HcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 134 FTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 134 ~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
....|. -|+.|.|.+|...+++.|-+.+-|+++|-.
T Consensus 67 ~~~~p~-~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~ 102 (560)
T 1e8g_A 67 DYFLAS-AIVAPRNVADVQSIVGLANKFSFPLWPISI 102 (560)
T ss_dssp TSSCCS-EEECCSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred cccCCc-EEEeCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 344554 578999999999999999999999999743
No 107
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=20.31 E-value=86 Score=28.51 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=27.8
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
.-|+.|.+.+|...+++.|.+.+-|++++-.
T Consensus 47 ~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~Gg 77 (571)
T 1f0x_A 47 LAVVFPGSLLELWRVLKACVTADKIILMQAA 77 (571)
T ss_dssp SEEECCSSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred cEEEeeCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4588999999999999999999999999754
No 108
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=20.23 E-value=76 Score=27.66 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=27.7
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
--|+.|.+.+|+..+++.|-+.+-|+.++-.
T Consensus 40 ~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 70 (459)
T 2bvf_A 40 SLIARCLSAGDVAKSVRYACDNGLEISVRSG 70 (459)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCcEEEEcC
Confidence 3588999999999999999999999999854
No 109
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=20.12 E-value=1.8e+02 Score=19.71 Aligned_cols=38 Identities=29% Similarity=0.320 Sum_probs=24.5
Q ss_pred HHHHHHHHhc-CCcEEEEecCCCccCCchhhchhhhhhcC
Q psy10429 8 NSALDEEMAR-DEKVFLLGEEVALYDGAYKVSRGLWKKYG 46 (207)
Q Consensus 8 ~~~L~~~~~~-~~~vv~~~~D~~~~~g~~~~~~~l~~~~g 46 (207)
.+++..+... .+++++++-++....|. .+.+.+++..+
T Consensus 49 ~~al~~l~~~~~~dlvilD~~l~~~~g~-~~~~~lr~~~~ 87 (145)
T 3kyj_B 49 QEALDKLAAQPNVDLILLDIEMPVMDGM-EFLRHAKLKTR 87 (145)
T ss_dssp HHHHHHHHHCTTCCEEEECTTSCCCTTC-HHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCCCCHH-HHHHHHHhcCC
Confidence 3455555556 79999998776544443 55667777763
No 110
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=20.10 E-value=51 Score=28.19 Aligned_cols=29 Identities=21% Similarity=0.226 Sum_probs=26.7
Q ss_pred EEEeeCCHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 141 KVVSPYNSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 141 ~v~~P~~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
.++.|.|.+|+..++++|-+.+-|++++-
T Consensus 33 ~vv~p~s~eel~~~v~~a~~~~ipv~vlG 61 (357)
T 3i99_A 33 QLVVAESIDDLKALYCSAEWASLPKLIIG 61 (357)
T ss_dssp EEEEECSHHHHHHHHSSSTTTTSCEEEES
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCEEEEC
Confidence 68899999999999999999999999874
No 111
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=20.08 E-value=89 Score=27.54 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=28.3
Q ss_pred cEEEeeCCHHHHHHHHHHHHcCCCcEEEEEC
Q psy10429 140 LKVVSPYNSEDAKGLLKAAIRDPDPVVFLEN 170 (207)
Q Consensus 140 l~v~~P~~~~e~~~ll~~a~~~~~P~~i~~~ 170 (207)
.-|+.|.+.+|...+++.|-+.+-|+.+|..
T Consensus 54 ~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~g 84 (500)
T 3tsh_A 54 LYIITPTQVSHIQSAVVCGRRHSVRIRVRSG 84 (500)
T ss_dssp SEEECCSSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCCcEEEEcC
Confidence 4689999999999999999999999999854
No 112
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=20.01 E-value=1.5e+02 Score=23.06 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=32.0
Q ss_pred HhHHHcCCCCcEEEeeCCHHHHHHHHHHHHcCCCcEEEEE
Q psy10429 130 FGAWFTQCPGLKVVSPYNSEDAKGLLKAAIRDPDPVVFLE 169 (207)
Q Consensus 130 ~~a~~~~iPgl~v~~P~~~~e~~~ll~~a~~~~~P~~i~~ 169 (207)
...++..=++-.|+.|.+.......++.+.+.+-|+++..
T Consensus 50 i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 50 IDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeC
Confidence 3456656577888999998888888888888899999875
Done!