BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1043
(1306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/587 (42%), Positives = 343/587 (58%), Gaps = 48/587 (8%)
Query: 72 KAEPLYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDISDVPVLAAYLQLS 131
++EP Y EYDFIV+G GSAG+VVA+RLSE+ WK+LL+EAGGDE + +P + S
Sbjct: 58 RSEPDY-EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGS 116
Query: 132 GLDWSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPG 191
+D+ Y TEP +CL+ RC WPRGKV+GG+SVLN M+YVRGNR DY+ W + GNPG
Sbjct: 117 DIDYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPG 176
Query: 192 WGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYENR 251
W + L +FKKSEDN + T YH GG L V + P++ PL+ A ++ GEELG+
Sbjct: 177 WAYNDVLPFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVH 236
Query: 252 DINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAI 311
D+NG+ TGFM+AQ T RNG R S+++AFL+P + R NLHI L++ TK+LI P + +
Sbjct: 237 DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVL 296
Query: 312 GVEFVKNH-QRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GVE I +KEV+LS GAVNSP IL+LSG+GPKD L + ++T+ +L VG
Sbjct: 297 GVEVSDQFGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGK 356
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NL +HV T+ N I ++ + LN+A + + Y
Sbjct: 357 NLHNHV-----TYFTNFFID------DADTAPLNWA-------------------TAMEY 386
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASD----------GGNQIRKAHGLREDFYDEVYGPI 479
+ +G ++ G + A + T+YA GG A R E+
Sbjct: 387 LLFRDGLMSGTGISDVTAKLATRYADSPERPDLQLYFGGYLASCA---RTGQVGELLS-- 441
Query: 480 NNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSK 539
NN P +L PRSRG I LRS +PL+ PRI Y + D+ TL+EG+K ++ LS+
Sbjct: 442 NNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQ 501
Query: 540 TRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVV 599
T +QY R C +DAY+EC +R + H G+CKMGP D AVV
Sbjct: 502 TTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVV 561
Query: 600 DPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDW 646
+ LRVHGI LRV+D SIMP + SGNT+AP +MI EKG+ ++K+ W
Sbjct: 562 NHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW 608
Score = 246 bits (629), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 171/271 (63%), Gaps = 3/271 (1%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPLDWQYK 761
EYDF+V+GGGSAG+VVA RLSE WKVLL+EAGG+E + IP + S +D++Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 762 TEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTL 821
TEP ACL +R WPRGKV+GG+SVLN M+YVRGNR DYD W A GN GW+Y D L
Sbjct: 124 TEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVL 183
Query: 822 PYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVGDINGERQ 881
P+F KSE V + YH G L V +F Y P++ A +++ ELG+ V D+NG+
Sbjct: 184 PFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNS 243
Query: 882 TGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVV 941
TGF A T +NG+R S+A+A+LRP R NLH+ L++ A ++ P + GV V
Sbjct: 244 TGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVL---GVEV 300
Query: 942 KKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
+ ++EV+LSAGA+ SP + L+
Sbjct: 301 SDQFGSTRKILVKKEVVLSAGAVNSPHILLL 331
Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 124/220 (56%), Gaps = 21/220 (9%)
Query: 985 DGPEWPDIQLFF----ASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLL 1040
D PE PD+QL+F AS A G N+ SI + P +L
Sbjct: 412 DSPERPDLQLYFGGYLASCARTGQVGELLSNNS-----------------RSIQIFPAVL 454
Query: 1041 RPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHN 1100
PRSRG I LR+ADPL+ P I NYL E+D+KTLVEG K +++T +K++ L
Sbjct: 455 NPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDK 514
Query: 1101 VTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLR 1160
+ GCE SDAYWEC VR T H G+CKMGP DP AVV+ LRV G+ GLR
Sbjct: 515 TVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIRGLR 574
Query: 1161 VIDASIMPTIVSGNTNAPTIMIAEKACDLIKEDWGVMEGR 1200
V+D SIMP + SGNT+AP +MIAEK L+K WG R
Sbjct: 575 VMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAWGAKVUR 614
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/588 (42%), Positives = 345/588 (58%), Gaps = 50/588 (8%)
Query: 72 KAEPLYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDISDVPVLAAYLQLS 131
++EP Y EYDFIV+G GSAG+VVA+RLSE+ WK+LL+EAGGDE + +P + S
Sbjct: 58 RSEPDY-EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGS 116
Query: 132 GLDWSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPG 191
+D+ Y TEP +CL+ RC WPRGKV+GG+SV+N M+Y+RGNR DY+ W + GNPG
Sbjct: 117 DIDYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPG 176
Query: 192 WGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYENR 251
W + L +FKKSEDN T YH GG L V + P++ PL+ A ++ GEE+G+ +
Sbjct: 177 WSYQDVLPFFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQ 236
Query: 252 DINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAI 311
D+NG+ TGFM+AQ T RNG R S+++AFL+P + R NLHI L++ VTKVLI P + +
Sbjct: 237 DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKNVV 296
Query: 312 GVEFVKNH-QRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GVE I +KEVI+SGGAVNSPQIL+LSG+GPK+ L + ++ + L VG
Sbjct: 297 GVEVSDQFGSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGK 356
Query: 370 NLQDHVGLGGFT-FLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLN 428
NL +HV FT F I+ ++ + LN+A + +
Sbjct: 357 NLHNHVAY--FTNFFID----------DADTAPLNWA-------------------TAME 385
Query: 429 YAMMGNGPLTVMGGVEGLAFVNTKYASD----------GGNQIRKAHGLREDFYDEVYGP 478
Y + +G ++ G + A + T++A GG A R E+
Sbjct: 386 YLLFRDGLMSGTGISDVTAKMATRWADRPNLPDLQLYFGG---YLASCARTGQVGELLS- 441
Query: 479 INNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELS 538
NN P +L P+SRG I LRS +PLD PRI Y +D D+ TL+EG+K + LS
Sbjct: 442 -NNSRAIQIFPAVLNPKSRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLS 500
Query: 539 KTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAV 598
+T +QY R C +DAY+EC +R + H G+CKMGP D AV
Sbjct: 501 QTSPLKQYGMRLDKTVVKGCESHAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAV 560
Query: 599 VDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDW 646
V+ LRVHG+ LRV+D SIMP + +GNT+AP +MI EKG+ ++K+ W
Sbjct: 561 VNHELRVHGVRGLRVMDTSIMPKVTAGNTHAPAVMIAEKGAYLLKRAW 608
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 171/271 (63%), Gaps = 3/271 (1%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPLDWQYK 761
EYDF+V+GGGSAG+VVA RLSE WKVLL+EAGG+E + IP + S +D++Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 762 TEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTL 821
TEP ACL +R WPRGKV+GG+SV+N M+Y+RGNR DYD W A GN GWSY+D L
Sbjct: 124 TEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVL 183
Query: 822 PYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVGDINGERQ 881
P+F KSE V + YH G L V +F Y P++ A +++ E+G+ V D+NG+
Sbjct: 184 PFFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQDLNGQNS 243
Query: 882 TGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVV 941
TGF A T +NG+R S+A+A+LRP R NLH+ L++ +V PG GV V
Sbjct: 244 TGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTK---NVVGVEV 300
Query: 942 KKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
+ ++EVI+S GA+ SPQ+ L+
Sbjct: 301 SDQFGSMRKILVKKEVIVSGGAVNSPQILLL 331
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 124/220 (56%), Gaps = 21/220 (9%)
Query: 985 DGPEWPDIQLFF----ASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLL 1040
D P PD+QL+F AS A G N+ +I + P +L
Sbjct: 412 DRPNLPDLQLYFGGYLASCARTGQVGELLSNNS-----------------RAIQIFPAVL 454
Query: 1041 RPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHN 1100
P+SRG I LR+ADPLD P I NYL DE+D+KTLVEG K +++T +K++ L
Sbjct: 455 NPKSRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQTSPLKQYGMRLDK 514
Query: 1101 VTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLR 1160
+ GCE SDAYWEC VR T H G+CKMGP DP AVV+ LRV GV GLR
Sbjct: 515 TVVKGCESHAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGVRGLR 574
Query: 1161 VIDASIMPTIVSGNTNAPTIMIAEKACDLIKEDWGVMEGR 1200
V+D SIMP + +GNT+AP +MIAEK L+K WG R
Sbjct: 575 VMDTSIMPKVTAGNTHAPAVMIAEKGAYLLKRAWGAKVUR 614
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 215/577 (37%), Positives = 309/577 (53%), Gaps = 59/577 (10%)
Query: 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD-ISDVPVLAAYLQLSG-LDWSY 137
YD+I+VGAGSAG V+ANRLS + ++ LLEAG +T+ + +P+ A L S L+W++
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 138 KTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEA 197
+T P + WPRGK +GGSS +N M+Y+RG+ +DY+ WE WG A
Sbjct: 62 QTAPQQN----LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRA 117
Query: 198 LYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDINGE 256
L FK+ E NQ ++ +H G L V + + PL++AFV+ G E N D NGE
Sbjct: 118 LELFKRLE--CNQRFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGE 175
Query: 257 YQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFV 316
YQ G Q T +NG R S+++AFL V +RPNL I +H +K+L + +R A+GV ++
Sbjct: 176 YQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFE--DRKAVGVSYI 233
Query: 317 KNHQRHVIRARK--EVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQD 373
K + H ++ EV+LS GAV +P +LMLSG+G L + G+ + DL +VG NLQD
Sbjct: 234 KKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQD 293
Query: 374 HVGLGGFTFLI----NQPISLVQDRL-ESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLN 428
H+ + T + +PI + + V + +Y G LT + V+S
Sbjct: 294 HLDI---TLMCAANSREPIGVALSFIPRGVSGLFSYVFKREGFLTSNVAESGGFVKS--- 347
Query: 429 YAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAI 488
P ++ F+ T Y D G +I +G D
Sbjct: 348 ------SPDRDRPNLQ-FHFLPT-YLKDHGRKIAGGYGYTLHICD--------------- 384
Query: 489 PMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYES 548
L P+SRGRI L+S NPL P I P Y SDH D+ T+I G+KI R+ Q S
Sbjct: 385 ---LLPKSRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKI------GRAILQAPS 435
Query: 549 RFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGI 608
+ + TD IR + TIYHPVGTC+MG D +VVDP L++ G+
Sbjct: 436 MAKHFKHEVVPGQAVKTDDEIIEDIRRRAETIYHPVGTCRMG--KDPASVVDPCLKIRGL 493
Query: 609 GNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQD 645
N+RV+DASIMP +V+GNTNAP IMI E +++I ++
Sbjct: 494 ANIRVVDASIMPHLVAGNTNAPTIMIAENAAEIIMRN 530
Score = 306 bits (785), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 290/552 (52%), Gaps = 78/552 (14%)
Query: 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES-PLSDIPCTYPALQTSP-LDWQY 760
YD+++VG GSAG V+A RLS + +V LLEAG ++ PL +P L S L+W +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 761 KTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDT 820
+T P LNGR WPRGK +GGSS +NAM+Y+RG+ DY AWE A W +
Sbjct: 62 QTAPQQN----LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRA 117
Query: 821 LPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDINGE 879
L F + E S +HG G L+V + +Y +P+++AFV++ E GD NGE
Sbjct: 118 LELFKRLECNQ--RFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGE 175
Query: 880 RQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGV 939
Q G T KNG R S+A+A+L +++RPNL + +HA ++ FE +A GV
Sbjct: 176 YQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFE-----DRKAVGV 230
Query: 940 -VVKKGRKDPVLVRARREVILSAGAIGSPQVYLIPN-----EHTHYQVDLT-DGPE---- 988
+KK V + EV+LS GA+G+P + ++ E + V L D PE
Sbjct: 231 SYIKKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKN 290
Query: 989 ---WPDIQLFFASAADNDDG-----------GLFN---KRNNGLKDDYYAG--------- 1022
DI L A+ + G GLF+ KR L +
Sbjct: 291 LQDHLDITLMCAANSREPIGVALSFIPRGVSGLFSYVFKREGFLTSNVAESGGFVKSSPD 350
Query: 1023 --------VFEPILYRD---------SITLAPLLLRPRSRGRIKLRTADPLDHPMIRPNY 1065
F P +D TL L P+SRGRI L++A+PL P+I PNY
Sbjct: 351 RDRPNLQFHFLPTYLKDHGRKIAGGYGYTLHICDLLPKSRGRIGLKSANPLQPPLIDPNY 410
Query: 1066 LYDEKDLKTLVEGAKIGYAITRTKAM-KRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHY 1124
L D +D+KT++ G KIG AI + +M K F H V +PG D E +R
Sbjct: 411 LSDHEDIKTMIAGIKIGRAILQAPSMAKHFK---HEV-VPG--QAVKTDDEIIE-DIRRR 463
Query: 1125 TMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAE 1184
TIYHPVGTC+MG DP +VVDP L++RG+A +RV+DASIMP +V+GNTNAPTIMIAE
Sbjct: 464 AETIYHPVGTCRMG--KDPASVVDPCLKIRGLANIRVVDASIMPHLVAGNTNAPTIMIAE 521
Query: 1185 KACDLIKEDWGV 1196
A ++I + V
Sbjct: 522 NAAEIIMRNLDV 533
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 218/584 (37%), Positives = 299/584 (51%), Gaps = 79/584 (13%)
Query: 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD-ISDVPVLAAYLQLSG-LDWSY 137
YD+I+VGAGSAG V+ANRLS + ++ LLEAG +T+ + +P+ A L S L+W++
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 138 KTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEA 197
+T P + WPRGK +GGSS +N M+Y+RG+ DY WE G WG A
Sbjct: 62 QTAPQQH----LNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRA 117
Query: 198 LYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDINGE 256
FKK E NQ ++ YH + G L V + PL+++FV+ G E N D NG
Sbjct: 118 FALFKKLE--HNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGA 175
Query: 257 YQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFV 316
+Q G Q T ++G R S+++AFL V RPNL I +H TKVL + +R A+GV ++
Sbjct: 176 HQEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFE--DRKAVGVSYI 233
Query: 317 KN--HQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQD 373
+ HQ+ EVILS GAVN+PQ+LMLSG+G L + GI + DL +VG NLQD
Sbjct: 234 QKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQD 293
Query: 374 HVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMG 433
H+ + L A P+ V + + +Y
Sbjct: 294 HLDI-----------------------TLMCAANSRTPIGVAFSFIPRGLVGLFSYIFKR 330
Query: 434 NGPLTVMGGVEGLAFVNTK---------------YASDGGNQIRKAHGLREDFYDEVYGP 478
G LT G FV + Y D G +I +G D
Sbjct: 331 KGFLTSNVAESG-GFVKSSPERDRPNLQFHFLPTYLKDHGRKIAVGYGYTLHICD----- 384
Query: 479 INNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELS 538
L P+SRGRI L+S NP+D P I P Y SD D+ T+I G+KI +
Sbjct: 385 -------------LLPKSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIF 431
Query: 539 KTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAV 598
S ++ R +P P T +D IR + TIYHPVGTC+MG D +V
Sbjct: 432 DAPSMAKHFKR-EIVPGPAVT-----SDDEIVADIRSRAETIYHPVGTCRMG--KDPASV 483
Query: 599 VDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
VDP L+V G+ N+RV+DASIMP +V+GNTNAP IMI E +++I
Sbjct: 484 VDPCLQVRGLRNIRVVDASIMPNLVAGNTNAPTIMIAENAAEII 527
Score = 303 bits (777), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 284/545 (52%), Gaps = 76/545 (13%)
Query: 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES-PLSDIPCTYPALQTSP-LDWQY 760
YD+++VG GSAG V+A RLS + +V LLEAG ++ PL +P L S L+W +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 761 KTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDT 820
+T P LN R WPRGK +GGSS +NAM+Y+RG+ DY AWE AG E W ++
Sbjct: 62 QTAPQQH----LNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRA 117
Query: 821 LPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDINGE 879
F K E + S YHGT G L+V + + +P++++FV++ E GD NG
Sbjct: 118 FALFKKLE--HNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGA 175
Query: 880 RQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGV 939
Q G T K+G R S+A+A+L +I RPNL + +HA +V FE +A GV
Sbjct: 176 HQEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFE-----DRKAVGV 230
Query: 940 -VVKKGRKDPVLVRARREVILSAGAIGSPQVYLIPN-----EHTHYQVDLT-DGPE---- 988
++K V EVILS GA+ +PQ+ ++ E + + L D PE
Sbjct: 231 SYIQKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKN 290
Query: 989 ---WPDIQLFFASAADNDDG-----------GLFN---KRNNGLKDDYYAG--------- 1022
DI L A+ + G GLF+ KR L +
Sbjct: 291 LQDHLDITLMCAANSRTPIGVAFSFIPRGLVGLFSYIFKRKGFLTSNVAESGGFVKSSPE 350
Query: 1023 --------VFEPILYRD---------SITLAPLLLRPRSRGRIKLRTADPLDHPMIRPNY 1065
F P +D TL L P+SRGRI L++A+P+D P+I PNY
Sbjct: 351 RDRPNLQFHFLPTYLKDHGRKIAVGYGYTLHICDLLPKSRGRIGLKSANPMDDPLIDPNY 410
Query: 1066 LYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYT 1125
L D +D+KT++ G KIG AI +M + +PG T SD +R
Sbjct: 411 LSDPEDIKTMIAGIKIGRAIFDAPSMAKH---FKREIVPGPAVT---SDDEIVADIRSRA 464
Query: 1126 MTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEK 1185
TIYHPVGTC+MG DP +VVDP L+VRG+ +RV+DASIMP +V+GNTNAPTIMIAE
Sbjct: 465 ETIYHPVGTCRMG--KDPASVVDPCLQVRGLRNIRVVDASIMPNLVAGNTNAPTIMIAEN 522
Query: 1186 ACDLI 1190
A ++I
Sbjct: 523 AAEII 527
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 294/576 (51%), Gaps = 54/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET---------DISDVPVLAAYLQ 129
EY FIVVGAGSAG V+ANRL+E N ++LLLEAG + I L A L
Sbjct: 45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLC 104
Query: 130 LSGLDWSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGN 189
+W Y TE ++ WPRG+V GGSS LN M+Y+RG+ DYN W G
Sbjct: 105 DDKYNWYYHTEAQP----GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGA 160
Query: 190 PGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE 249
GW A L YF+K++ + L Y G L V + PL +AF++ + GY
Sbjct: 161 EGWDYAHCLPYFRKAQKHE---LGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYP 217
Query: 250 -NRDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNR 308
D+NG Q GF T+ G R ST+ A+L+P +RPNL + + V++VL +
Sbjct: 218 FTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--GT 275
Query: 309 MAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
A+GVE++K+ Q H +EVILSGGA+NSPQ+LMLSG+G D L +GI + L V
Sbjct: 276 RAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGV 335
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ + QPI+ L S Q L +G LE +
Sbjct: 336 GQNLQDHLEI-YIQHACTQPIT-----LHSAQKPLRKVCIG-----------LEWL---- 374
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ G+G +E F+ ++ + + H L D P ++ +
Sbjct: 375 -WRFTGDG---ATAHLETGGFIRSRPGVPHPD--IQFHFLPSQVIDHGRKP-TQQEAYQV 427
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R S G +KLRS NP D+P I P Y S D+ + VK+ E+ +F
Sbjct: 428 HVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAF---- 483
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
+ F +H+ +D + +R + + YHP TCKMG +D AVVD + RV G
Sbjct: 484 APFRGKELQPGSHV--QSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIG 541
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ NLRVIDASIMP++VSGN NAP IMI EK +D+IK
Sbjct: 542 VENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIK 577
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 159/282 (56%), Gaps = 25/282 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSD--------IPCTYPA-LQ 752
EY F+VVG GSAG V+A RL+E N +VLLLEAG ++ + +P A L
Sbjct: 45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLC 104
Query: 753 TSPLDWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGN 812
+W Y TE A GL+GR WPRG+V GGSS LNAM+Y+RG+ DY+ W G
Sbjct: 105 DDKYNWYYHTE----AQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGA 160
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYE 872
EGW Y LPYF K++ + + + Y G GPL V + P+ +AF+++A + GY
Sbjct: 161 EGWDYAHCLPYFRKAQKHELGANM---YRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYP 217
Query: 873 VG-DINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPD 931
D+NG +Q GF T+ G R STA AYLRP ++RPNL + + RV FE
Sbjct: 218 FTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE---- 273
Query: 932 GQMRATGV-VVKKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
RA GV +K G+ V REVILS GAI SPQ+ ++
Sbjct: 274 -GTRAVGVEYIKDGQSHKAYV--SREVILSGGAINSPQLLML 312
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
Query: 1040 LRPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLH 1099
+R S G +KLR+ +P DHPMI PNYL E D++ + K+ I A + F P
Sbjct: 432 MRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIF---AQEAFAPFRG 488
Query: 1100 NVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGL 1159
PG H SD + VR + YHP TCKMG SDP AVVD + RV GV L
Sbjct: 489 KELQPG-SHVQ--SDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVENL 545
Query: 1160 RVIDASIMPTIVSGNTNAPTIMIAEKACDLIK 1191
RVIDASIMP++VSGN NAPTIMIAEKA D+IK
Sbjct: 546 RVIDASIMPSVVSGNLNAPTIMIAEKAADVIK 577
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 307 bits (787), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 296/576 (51%), Gaps = 54/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET---------DISDVPVLAAYLQ 129
EY F+VVGAGSAG V+A+RL+E N ++LLLEAG + I L + L
Sbjct: 42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLC 101
Query: 130 LSGLDWSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGN 189
+W Y TEP M+ WPRG+V GGSS LN M+Y+RG+ DYN W G
Sbjct: 102 DDKYNWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGA 157
Query: 190 PGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE 249
GW A L YF+K++ + L Y G L V + PL +AF++ + GY
Sbjct: 158 EGWDYAHCLPYFRKAQRHE---LGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYP 214
Query: 250 -NRDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNR 308
D+NG Q GF TV G R ST+ A+L PV +RPNL + + V++VL +
Sbjct: 215 FTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE--GT 272
Query: 309 MAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
A+GVE++K+ QRH +EVILSGGA+NSPQ+LMLSG+G D L + I + L V
Sbjct: 273 RAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGV 332
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ + QPI+ L S Q L +G LE +
Sbjct: 333 GQNLQDHLEV-YVQQACTQPIT-----LHSAQKPLRKVCIG-----------LEWL---- 371
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
++ G+G +E F+ ++ + + H L D P ++ +
Sbjct: 372 -WSYTGDG---ATAHLETGGFIRSRPGVPHPDI--QFHFLPSQVIDHGRKP-TQQEAYQV 424
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R S G +KLRS NP D+P I P Y S D +E + + LS+ ++
Sbjct: 425 HVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETD----VEDFRQCVRLSREIFAQEAL 480
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
+ F +H+ +D + +R + + YHP TCKMG +D AVVD + +V G
Sbjct: 481 APFRGKELQPGSHV--QSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIG 538
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ NLRV+DASIMP++VSGN NAP +MI EK +D+IK
Sbjct: 539 VENLRVVDASIMPSVVSGNLNAPTVMIAEKAADIIK 574
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 160/282 (56%), Gaps = 25/282 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTY----PALQTSPL- 756
EY FVVVG GSAG V+A RL+E N +VLLLEAG ++ + + PA S L
Sbjct: 42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLC 101
Query: 757 ----DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGN 812
+W Y TEP G++ R WPRG+V GGSS LNAM+Y+RG+ DY+ W G
Sbjct: 102 DDKYNWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGA 157
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYE 872
EGW Y LPYF K++ + + + Y G GPL V + P+ +AF+++A + GY
Sbjct: 158 EGWDYAHCLPYFRKAQRHELGANM---YRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYP 214
Query: 873 VG-DINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPD 931
D+NG +Q GF T+ G R STA AYL P+++RPNL + + RV FE
Sbjct: 215 FTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE---- 270
Query: 932 GQMRATGV-VVKKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
RA GV +K G++ V REVILS GAI SPQ+ ++
Sbjct: 271 -GTRAVGVEYIKDGQRHKAYV--SREVILSGGAINSPQLLML 309
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 93/152 (61%), Gaps = 6/152 (3%)
Query: 1040 LRPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLH 1099
+R S G +KLR+A+P DHP+I PNYL E D++ + ++ I +A+ P
Sbjct: 429 MRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALA---PFRG 485
Query: 1100 NVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGL 1159
PG H SD + VR + YHP TCKMG SDP AVVD + +V GV L
Sbjct: 486 KELQPG-SHVQ--SDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENL 542
Query: 1160 RVIDASIMPTIVSGNTNAPTIMIAEKACDLIK 1191
RV+DASIMP++VSGN NAPT+MIAEKA D+IK
Sbjct: 543 RVVDASIMPSVVSGNLNAPTVMIAEKAADIIK 574
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 300 bits (769), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 212/576 (36%), Positives = 293/576 (50%), Gaps = 54/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET---------DISDVPVLAAYLQ 129
EY ++VVGAGSAG V+A RL+E ++LLLEAG + I L A L
Sbjct: 40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLC 99
Query: 130 LSGLDWSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGN 189
+W Y TE ++ WPRG+V GGSS LN M+YVRG+ DY W+ G
Sbjct: 100 DDRYNWCYHTEVQR----GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGA 155
Query: 190 PGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE 249
GW A L YF+K++ + L + Y + G L V + PL AF+ ++ GY
Sbjct: 156 RGWDYAHCLPYFRKAQGHE---LGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYP 212
Query: 250 -NRDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNR 308
D+NG Q GF T+ G R S + A+L P +R NL + V++VL +
Sbjct: 213 LTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFE--GT 270
Query: 309 MAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
A+GVE+VKN Q H A KEVILSGGA+NSPQ+LMLSGIG D L +GI + L V
Sbjct: 271 RAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGV 330
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ + +PI+ L S Q L +G LE +
Sbjct: 331 GQNLQDHLEI-YIQQACTRPIT-----LHSAQKPLRKVCIG-----------LEWL---- 369
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ G G +E F+ ++ + + H L D P ++ +
Sbjct: 370 -WKFTGEG---ATAHLETGGFIRSQPGVPHPDI--QFHFLPSQVIDHGRVP-TQQEAYQV 422
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R S G +KLRS NP D+P IQP Y S D IE ++ ++L++ ++
Sbjct: 423 HVGPMRGTSVGWLKLRSANPQDHPVIQPNYLSTETD----IEDFRLCVKLTREIFAQEAL 478
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
+ F +HI +D + +R + + YHP TCKMG +D AVVDP+ RV G
Sbjct: 479 APFRGKELQPGSHI--QSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLG 536
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ NLRV+DASIMP++VSGN NAP IMI EK +D+IK
Sbjct: 537 VENLRVVDASIMPSMVSGNLNAPTIMIAEKAADIIK 572
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 153/282 (54%), Gaps = 25/282 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTY----PALQTSPL- 756
EY +VVVG GSAG V+A RL+E +VLLLEAG ++ ++ PA + L
Sbjct: 40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLC 99
Query: 757 ----DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGN 812
+W Y TE GL+GR WPRG+V GGSS LNAM+YVRG+ DY+ W+ G
Sbjct: 100 DDRYNWCYHTEVQR----GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGA 155
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYE 872
GW Y LPYF K++ + + S Y G GPL V + P+ AF+E+ + GY
Sbjct: 156 RGWDYAHCLPYFRKAQGHELGA---SRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYP 212
Query: 873 VG-DINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPD 931
+ D+NG +Q GF T+ G R S A AYL P ++R NL + RV FE
Sbjct: 213 LTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFE---- 268
Query: 932 GQMRATGV-VVKKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
RA GV VK G+ A +EVILS GAI SPQ+ ++
Sbjct: 269 -GTRAVGVEYVKNGQSHRAY--ASKEVILSGGAINSPQLLML 307
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Query: 1040 LRPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLH 1099
+R S G +KLR+A+P DHP+I+PNYL E D++ K+ I +A+ P
Sbjct: 427 MRGTSVGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALA---PFRG 483
Query: 1100 NVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGL 1159
PG H SD + VR + YHP TCKMG SDP AVVDP+ RV GV L
Sbjct: 484 KELQPG-SHIQ--SDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENL 540
Query: 1160 RVIDASIMPTIVSGNTNAPTIMIAEKACDLIK 1191
RV+DASIMP++VSGN NAPTIMIAEKA D+IK
Sbjct: 541 RVVDASIMPSMVSGNLNAPTIMIAEKAADIIK 572
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 295/579 (50%), Gaps = 67/579 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAYLQLSGLDWSY 137
+ D++VVG GSAGAVVA+RLS ++ LEAG D+ VP + L S +DW Y
Sbjct: 4 QSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDY 63
Query: 138 KTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEA 197
TEP ++ WPRGKV+GGSS +N M++VRG +DY+ W + P W A+
Sbjct: 64 LTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADV 119
Query: 198 LYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTP-------LAEAFVRGGEELGYEN 250
L YF++ E+ +H G + P H + A++ E G+
Sbjct: 120 LGYFRRIEN------VTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAA 173
Query: 251 RDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
N GF T R GAR ST+ A+L+P R NL + + T+V+ID A
Sbjct: 174 ARPNSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVIDGDR--A 231
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGY 369
+GVE+ + Q ++ AR+EV+L GAVNSPQ+LMLSGIG +DHL + I T+ +VG
Sbjct: 232 VGVEYQSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGC 291
Query: 370 NLQDH-VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLN 428
NL DH V + GF + + E +++Y + G LT G+
Sbjct: 292 NLLDHLVTVLGFDVEKDSLFA-----AEKPGQLISYLLRRRGMLTSNVGE---------A 337
Query: 429 YAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAI 488
Y + + P + +E L F FYDE P V
Sbjct: 338 YGFVRSRPELKLPDLE-LIFAPAP------------------FYDEALVPPAGHGVVFG- 377
Query: 489 PMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHH--DMLTLIEGVKIILELSKTRSFRQY 546
P+L+ P+SRG+I LRS +P P I+P Y SD D ++ G++I +++ R R
Sbjct: 378 PILVAPQSRGQITLRSADPHAKPVIEPRYLSDLGGVDRAAMMAGLRICARIAQARPLRDL 437
Query: 547 ESRFHNIPFP-NCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRV 605
+I P N T + +A E + S T+YHP+GTC+MG +D +VVDP+LRV
Sbjct: 438 ---LGSIARPRNSTEL---DEATLELALATCSHTLYHPMGTCRMG--SDEASVVDPQLRV 489
Query: 606 HGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQ 644
G+ LRV DAS+MP+ V G+T+AP ++IGEK +D+I+
Sbjct: 490 RGVDGLRVADASVMPSTVRGHTHAPSVLIGEKAADLIRS 528
Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 275/544 (50%), Gaps = 68/544 (12%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG-GEESPLSDIPCTYPALQTSPLD 757
M + D+VVVG GSAGAVVA RLS V+ LEAG +++ +P + L S +D
Sbjct: 1 MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEID 60
Query: 758 WQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSY 817
W Y TEP L+GR WPRGKV+GGSS +NAM++VRG DYD W A WSY
Sbjct: 61 WDYLTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 818 RDTLPYFIKSESVNIS-SLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVGDI 876
D L YF + E+V + V G GPL + R VT A++ +A E G+
Sbjct: 117 ADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAARP 176
Query: 877 NGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRA 936
N R GF T + G R STA AYL+P + R NL V + A RV DG RA
Sbjct: 177 NSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVI----DGD-RA 231
Query: 937 TGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLIP--NEHTHY-QVDLTDGPEWPDI- 992
GV + + + V ARREV+L AGA+ SPQ+ ++ + H + D+ P++
Sbjct: 232 VGVEYQSDGQTRI-VYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVG 290
Query: 993 -----QLFFASAADNDDGGLFNKRNNG-----------------------------LKDD 1018
L D + LF G LK
Sbjct: 291 CNLLDHLVTVLGFDVEKDSLFAAEKPGQLISYLLRRRGMLTSNVGEAYGFVRSRPELKLP 350
Query: 1019 YYAGVFEPILYRDS---------ITLAPLLLRPRSRGRIKLRTADPLDHPMIRPNYLYDE 1069
+F P + D + P+L+ P+SRG+I LR+ADP P+I P YL D
Sbjct: 351 DLELIFAPAPFYDEALVPPAGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLSDL 410
Query: 1070 K--DLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYTMT 1127
D ++ G +I I + + ++ L ++ P ++T L +A E + + T
Sbjct: 411 GGVDRAAMMAGLRICARIAQARPLRDL---LGSIARP--RNSTELDEATLELALATCSHT 465
Query: 1128 IYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKAC 1187
+YHP+GTC+MG SD +VVDP+LRVRGV GLRV DAS+MP+ V G+T+AP+++I EKA
Sbjct: 466 LYHPMGTCRMG--SDEASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPSVLIGEKAA 523
Query: 1188 DLIK 1191
DLI+
Sbjct: 524 DLIR 527
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 295/579 (50%), Gaps = 67/579 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAYLQLSGLDWSY 137
+ D++VVG GSAGAVVA+RLS ++ LEAG D+ VP + L S +DW Y
Sbjct: 4 QSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDY 63
Query: 138 KTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEA 197
TEP ++ WPRGKV+GGSS +N M++VRG +DY+ W + P W A+
Sbjct: 64 LTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADV 119
Query: 198 LYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTP-------LAEAFVRGGEELGYEN 250
L YF++ E+ +H G + P H + A++ E G+
Sbjct: 120 LGYFRRIEN------VTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAA 173
Query: 251 RDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
N GF T R GAR ST+ A+L+P R NL + + T+V+ID A
Sbjct: 174 ARPNSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVIDGDR--A 231
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGY 369
+GVE+ + Q ++ AR+EV+L GAVNSPQ+LMLSGIG +DHL + I T+ +VG
Sbjct: 232 VGVEYQSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGC 291
Query: 370 NLQDH-VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLN 428
NL DH V + GF + + E +++Y + G LT G+
Sbjct: 292 NLLDHLVTVLGFDVEKDSLFA-----AEKPGQLISYLLRRRGMLTSNVGE---------A 337
Query: 429 YAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAI 488
Y + + P + +E L F FYDE P V
Sbjct: 338 YGFVRSRPELKLPDLE-LIFAPAP------------------FYDEALVPPAGHGVVFG- 377
Query: 489 PMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHH--DMLTLIEGVKIILELSKTRSFRQY 546
P+L+ P+SRG+I LRS +P P I+P Y SD D ++ G++I +++ R R
Sbjct: 378 PILVAPQSRGQITLRSADPHAKPVIEPRYLSDLGGVDRAAMMAGLRICARIAQARPLRDL 437
Query: 547 ESRFHNIPFP-NCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRV 605
+I P N T + +A E + S T+YHP+GTC+MG +D +VVDP+LRV
Sbjct: 438 ---LGSIARPRNSTEL---DEATLELALATCSHTLYHPMGTCRMG--SDEASVVDPQLRV 489
Query: 606 HGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQ 644
G+ LRV DAS+MP+ V G+T+AP ++IGEK +D+I+
Sbjct: 490 RGVDGLRVADASVMPSTVRGHTHAPSVLIGEKAADLIRS 528
Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 275/544 (50%), Gaps = 68/544 (12%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG-GEESPLSDIPCTYPALQTSPLD 757
M + D+VVVG GSAGAVVA RLS V+ LEAG +++ +P + L S +D
Sbjct: 1 MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEID 60
Query: 758 WQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSY 817
W Y TEP L+GR WPRGKV+GGSS +NAM++VRG DYD W A WSY
Sbjct: 61 WDYLTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 818 RDTLPYFIKSESVNIS-SLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVGDI 876
D L YF + E+V + V G GPL + R VT A++ +A E G+
Sbjct: 117 ADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAARP 176
Query: 877 NGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRA 936
N R GF T + G R STA AYL+P + R NL V + A RV DG RA
Sbjct: 177 NSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVI----DGD-RA 231
Query: 937 TGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLIP--NEHTHY-QVDLTDGPEWPDI- 992
GV + + + V ARREV+L AGA+ SPQ+ ++ + H + D+ P++
Sbjct: 232 VGVEYQSDGQTRI-VYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVG 290
Query: 993 -----QLFFASAADNDDGGLFNKRNNG-----------------------------LKDD 1018
L D + LF G LK
Sbjct: 291 CNLLDHLVTVLGFDVEKDSLFAAEKPGQLISYLLRRRGMLTSNVGEAYGFVRSRPELKLP 350
Query: 1019 YYAGVFEPILYRDS---------ITLAPLLLRPRSRGRIKLRTADPLDHPMIRPNYLYDE 1069
+F P + D + P+L+ P+SRG+I LR+ADP P+I P YL D
Sbjct: 351 DLELIFAPAPFYDEALVPPAGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLSDL 410
Query: 1070 K--DLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYTMT 1127
D ++ G +I I + + ++ L ++ P ++T L +A E + + T
Sbjct: 411 GGVDRAAMMAGLRICARIAQARPLRDL---LGSIARP--RNSTELDEATLELALATCSHT 465
Query: 1128 IYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKAC 1187
+YHP+GTC+MG SD +VVDP+LRVRGV GLRV DAS+MP+ V G+T+AP+++I EKA
Sbjct: 466 LYHPMGTCRMG--SDEASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPSVLIGEKAA 523
Query: 1188 DLIK 1191
DLI+
Sbjct: 524 DLIR 527
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 205/590 (34%), Positives = 287/590 (48%), Gaps = 92/590 (15%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE ++++E GG + I L+ L +S DW
Sbjct: 3 EADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWG 62
Query: 137 YKTEPS---STSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWG 193
+ +EP LA PRGKV+GGSS +N M+YVRG+ D++HW G GWG
Sbjct: 63 FASEPEPHLGGRVLAT-------PRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWG 115
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRD 252
A+ L YFK+ EDN E + GG L VQ PL AFV G + G+E D
Sbjct: 116 FADVLPYFKRMEDNDG---GEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDD 172
Query: 253 INGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIG 312
NG Q GF + T+ G R S + A+L+P R N+ + + +V+I+ N+ AIG
Sbjct: 173 YNGSKQEGFGPMEQTISGGRRWSAASAYLKPALKRKNVSL-VKGFARRVIIE--NQRAIG 229
Query: 313 VEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNL 371
VE + Q V++AR+EVI++ ++NSP+ILMLSGIGP +HL + GI + D VG NL
Sbjct: 230 VEIEAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNL 289
Query: 372 QDHVGLGGFTFLINQ----PISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
QDH+ L I Q PI+ L SV + + A++G L G
Sbjct: 290 QDHMEL-----YIQQESTKPIT-----LNSVLNPFSKALIGAQWLFFKSG---------- 329
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASD---------------GGNQIRKAHGLREDFY 472
L E AFV ++ D G K+HG +
Sbjct: 330 ---------LGATNHFEAAAFVRSRAGVDYPDIQYHFIPAAVRYDGKAAAKSHGFQAHV- 379
Query: 473 DEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVK 532
GP +R +SRG + LRS +P P I+ Y S D ++
Sbjct: 380 ----GP-------------MRSKSRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIR 422
Query: 533 IILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPE 592
+ E+ +F F +H+ +D + IR ++ + YHP GTCKMG
Sbjct: 423 LTREIFGQSAF----DAFRGQEISPGSHV--QSDDDLDVFIRDHAESAYHPCGTCKMGRA 476
Query: 593 TDSEAVVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
D +VVDP RV G+ LRV D+SI P + +GN NAP IM GEK SD I
Sbjct: 477 DDVTSVVDPECRVIGVDGLRVADSSIFPRVTNGNLNAPSIMTGEKASDHI 526
Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 259/550 (47%), Gaps = 87/550 (15%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYPA-LQTSPLDWQ 759
E DFV++G GSAG+ +A RLSE V+++E GG + PL +P L S DW
Sbjct: 3 EADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWG 62
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
+ +EP L GR PRGKVIGGSS +N M+YVRG+ RD+D W G GW + D
Sbjct: 63 FASEPEPH----LGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFAD 118
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDING 878
LPYF + E + + + G GPL V+ +P+ AFVE+ + G+E+ D NG
Sbjct: 119 VLPYFKRMEDNDGG---EDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNG 175
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T+ G R S A AYL+P + R N+ + + A RV E RA G
Sbjct: 176 SKQEGFGPMEQTISGGRRWSAASAYLKPALKRKNVSL-VKGFARRVIIE-----NQRAIG 229
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH------------------ 976
V + + K +V+ARREVI++A +I SP++ ++ P EH
Sbjct: 230 VEI-EAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRN 288
Query: 977 --THYQVDLTD--------------------GPEWPDIQLFFAS---AADNDDGGLFNKR 1011
H ++ + G +W LFF S A ++ + F +
Sbjct: 289 LQDHMELYIQQESTKPITLNSVLNPFSKALIGAQW----LFFKSGLGATNHFEAAAFVRS 344
Query: 1012 NNGLK--DDYYAGVFEPILYRDSIT---------LAPLLLRPRSRGRIKLRTADPLDHPM 1060
G+ D Y + + Y + P+ R +SRG + LR+ DP P+
Sbjct: 345 RAGVDYPDIQYHFIPAAVRYDGKAAAKSHGFQAHVGPM--RSKSRGSVTLRSPDPKAKPV 402
Query: 1061 IRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQ 1120
IR NY+ D ++ I A F I H SD +
Sbjct: 403 IRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFR----GQEISPGSHVQ--SDDDLDVF 456
Query: 1121 VRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTI 1180
+R + + YHP GTCKMG D +VVDP RV GV GLRV D+SI P + +GN NAP+I
Sbjct: 457 IRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADSSIFPRVTNGNLNAPSI 516
Query: 1181 MIAEKACDLI 1190
M EKA D I
Sbjct: 517 MTGEKASDHI 526
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 285/550 (51%), Gaps = 79/550 (14%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES-PLSDIPCTYPALQTSPLD 757
M +D++VVGGGSAG V+A RLSE + +V L+EAG ++ PL +P + + T P
Sbjct: 1 MTSGFDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHT 60
Query: 758 WQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSY 817
W TEP A N R+ + +G+++GG S +NA ++ RG+ D+D W A G +GWS+
Sbjct: 61 WDLLTEPQKHA----NNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSF 116
Query: 818 RDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DI 876
RD YFI+SE +++ +HGT GPL V +P + AFV+S E+G D
Sbjct: 117 RDVQKYFIRSEG---NAVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDF 173
Query: 877 NGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRA 936
NG Q G T++N RCSTA YLRP + R NL V + ++ F RA
Sbjct: 174 NGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFN-----GTRA 228
Query: 937 TGV-VVKKGRKDPVLVRARREVILSAGAIGSPQVYLIP---------------------- 973
TGV + G + A +E++++AGAIG+P++ ++
Sbjct: 229 TGVQYIANGTLN--TAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGV 286
Query: 974 --NEHTHYQVDLTDGPE---------------WPDIQ-LFFAS---AADNDDGGLF--NK 1010
N H+ VD+ + W ++ F S A++ +GG F +
Sbjct: 287 GENLQDHFGVDIVAELKTDESFDKYRKLHWMLWAGLEYTMFRSGPVASNVVEGGAFWYSD 346
Query: 1011 RNNGLKDDYY---------AGVFEPILYRDSITLAPLLLRPRSRGRIKLRTADPLDHPMI 1061
++G+ D + AGV ITL +LRP+SRG ++LR+ADP +PM+
Sbjct: 347 PSSGVPDLQFHFLAEAGAEAGVTSVPKGASGITLNSYVLRPKSRGTVRLRSADPRVNPMV 406
Query: 1062 RPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQV 1121
PN+L D DL+T EG ++ Y + ++++ + G + T + Y
Sbjct: 407 DPNFLGDPADLETSAEGVRLSYEMFSQPSLEKH--IRKTCFFSGKQPTMQMYRDY----A 460
Query: 1122 RHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIM 1181
R + T YHP TCKMG D +VVDPRL+V G+ G+R+ D+S+MP+++ NTNA TIM
Sbjct: 461 REHGRTSYHPTCTCKMGRDDM--SVVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIM 518
Query: 1182 IAEKACDLIK 1191
I+E+A D I+
Sbjct: 519 ISERAADFIQ 528
Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 298/572 (52%), Gaps = 56/572 (9%)
Query: 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD-ISDVPVLAAYLQLSGLDWSYK 138
+D+IVVG GSAG V+A RLSE + ++ L+EAG +T + +PV A + W
Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWDLL 64
Query: 139 TEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEAL 198
TEP + + + + +G+++GG S +N ++ RG+ +D++ W + G GW +
Sbjct: 65 TEPQKHA----NNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQ 120
Query: 199 YYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDINGEY 257
YF +SE N + +H + G L V P + AFV+ +E+G N D NG
Sbjct: 121 KYFIRSEGNA---VFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFNGAS 177
Query: 258 QTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK 317
Q G + Q T+RN RCST+ +L+P R NL + + V K++ + A GV+++
Sbjct: 178 QEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFN--GTRATGVQYIA 235
Query: 318 NHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQDHVG 376
N + A +E++++ GA+ +P+++MLSG+GP HL + GI +QDL VG NLQDH G
Sbjct: 236 NGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDHFG 295
Query: 377 LGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGP 436
+ +V + L++ +S Y + + + L Y M +GP
Sbjct: 296 -----------VDIVAE-LKTDESFDKYRKL------------HWMLWAGLEYTMFRSGP 331
Query: 437 LTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPM---LLR 493
+ VEG AF + +S G + H L E + G + S I + +LR
Sbjct: 332 V-ASNVVEGGAFWYSDPSS--GVPDLQFHFLAEAGAEA--GVTSVPKGASGITLNSYVLR 386
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY--ESRFH 551
P+SRG ++LRS +P P + P + D D+ T EGV++ E+ S ++ ++ F
Sbjct: 387 PKSRGTVRLRSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLEKHIRKTCFF 446
Query: 552 NIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNL 611
+ P + MY D R + T YHP TCKMG D +VVDPRL+VHG+ +
Sbjct: 447 SGKQPT---MQMYRD-----YAREHGRTSYHPTCTCKMG--RDDMSVVDPRLKVHGLEGI 496
Query: 612 RVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
R+ D+S+MP+++ NTNA IMI E+ +D I+
Sbjct: 497 RICDSSVMPSLLGSNTNAATIMISERAADFIQ 528
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 290/570 (50%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWS 136
+ D+++VG+GSAG+ +A RLSE + ++++EAGG + I LA + + +W
Sbjct: 2 QADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP +++ R PRGKV+GGSS +N ++YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEPN----LDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E + + E + + G L VQ P PL AF++ G + G+E D NG
Sbjct: 118 VLPYFKRME---HSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T+ NG R S + A+L+P R N+ + ++ KV+I+ N A+GVE
Sbjct: 175 SKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTL-VNGFARKVIIE--NGRAVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
+ + ++A +EVI+S + NSP++LMLSGIGP HL DMGI+ D VG NLQDH
Sbjct: 232 ERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMG-NGPLTVMGGDRLESVQSVLNYAMMG 433
+ F + +P+SL S L + G G ++ L + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG + +
Sbjct: 343 SAPGLKQPDIQ-YHFLPVAISYD-GKAAAKSHGFQAHVGYNL------------------ 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P D P I+ Y S D V++ E+ ++F + R I
Sbjct: 383 SKSRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDF--RGPEI 440
Query: 554 -PFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P N + TD + +R + + YHP GTC+MG D AVVDP RV G+ LR
Sbjct: 441 QPGEN-----IETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P + GN N P IM GEK +D I
Sbjct: 496 VADSSIFPHVTYGNLNGPSIMTGEKAADHI 525
Score = 193 bits (490), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 170/563 (30%), Positives = 238/563 (42%), Gaps = 113/563 (20%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ D+V+VG GSAG+ +A RLSE + V+++EAGG + P +P + +W
Sbjct: 2 QADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP L+ RR PRGKVIGGSS +N ++YVRG+ D++ WE G +GW+Y D
Sbjct: 62 YLSEPEPN----LDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 820 TLPYFIKSESVNISSL----VDSPYHGTQGPLSVEEFR----------------YYSPVT 859
LPYF + E + D P H +GP+S F Y
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQ 177
Query: 860 EAF--VESAGELGYEVGDINGERQTGFTRAHGTLKNGL--------------------RC 897
E F +E G N + R + TL NG R
Sbjct: 178 EGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIENGRAVGVEIERRGRV 237
Query: 898 STAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGR------------ 945
T KA I++ S +S + GP ++ G+ VK R
Sbjct: 238 ETVKANREVIVSAS----SFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHME 293
Query: 946 -------KDPVLVR----------ARREVILSAGAIGSPQVYLIPNEHTHYQVDLTDGPE 988
PV + A + +LS G +G+ + E + + G +
Sbjct: 294 FYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQF----EACAF-LRSAPGLK 348
Query: 989 WPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRI 1048
PDIQ F A + DG K + G + Y S +SRG +
Sbjct: 349 QPDIQYHFLPVAISYDGKAAAKSH---------GFQAHVGYNLS----------KSRGNV 389
Query: 1049 KLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRF-NPVLHNVTIPGCE 1107
LR+ADP D P+IR NY+ +D + ++ I KA F P + PG
Sbjct: 390 TLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQ----PGEN 445
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + + YHP GTC+MG +DP AVVDP RV GV GLRV D+SI
Sbjct: 446 IET---DEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIF 502
Query: 1168 PTIVSGNTNAPTIMIAEKACDLI 1190
P + GN N P+IM EKA D I
Sbjct: 503 PHVTYGNLNGPSIMTGEKAADHI 525
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 287/576 (49%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+VGAGSAG +A RL+E E +LLLEAGG + + + +P A+ LQ +
Sbjct: 4 EYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M+ R RGK +GGSS++N M Y+RGN DY++W L G W
Sbjct: 64 WAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLENWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTD 176
Query: 252 DINGEYQTGFMVAQGTV-RNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV +NG R ST++ +L K R L I H+ KVL + K A
Sbjct: 177 DLNGYQQEGFGPMDRTVTKNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFEGKR--A 234
Query: 311 IGVEFV--KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
+GV ++ +R RARKEV++ GA+ SPQ+L SG+GP L + I + DL V
Sbjct: 235 VGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + + NG T +G +
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWYNQPAIGAEWLFNG--TGIGASNQFEAGGFI 351
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ P F+ +G N + K HG +
Sbjct: 352 RSRPEFDWPNIQ------YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R SRGR++L+S+NP DYP I Y + D +G+++ E+ + + Y
Sbjct: 391 ----MRSPSRGRVQLKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPYR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R I + TD + IR ++ T +HP +CKMG TD AVVD RVHG
Sbjct: 447 GR------EISPGIDVQTDEQLDKFIREHAETAFHPSCSCKMG--TDEMAVVDGEGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 499 MQGLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 534
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 159/281 (56%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M EYD+++VG GSAG +A RL+E + VLLLEAGG + L D PA PL
Sbjct: 1 MSQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRL-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P ++GRR RGK +GGSS++N M Y+RGN DYD W + G
Sbjct: 60 RRYNWAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E W+Y D LPYF K+E+ +I + YHG +GP+SV + +P+ A VE+ + GY
Sbjct: 116 ENWTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF T+ KNG R STA+ YL R L + H+ +V FE
Sbjct: 173 PRTDDLNGYQQEGFGPMDRTVTKNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFE-- 230
Query: 930 PDGQMRATGVVVKKG-RKDPVLVRARREVILSAGAIGSPQV 969
RA GV G ++ V RAR+EV++ +GAI SPQ+
Sbjct: 231 ---GKRAVGVRYLIGAAEERVEARARKEVLVCSGAIASPQL 268
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP+IQ F A N +G +NG+K+ + +R SRGR
Sbjct: 358 DWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPSRGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
++L++ +P D+P I NY+ E+D + +G ++ I + A+ +P PG +
Sbjct: 399 VQLKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPAL---DPYRGREISPGID 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + T +HP +CKMG +D AVVD RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEQLDKFIREHAETAFHPSCSCKMG--TDEMAVVDGEGRVHGMQGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I +GN NAPTIMIAEK D I+
Sbjct: 511 PIITTGNLNAPTIMIAEKIADKIR 534
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 286/576 (49%), Gaps = 64/576 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAY-LQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE + ++++E G D + +P ++ + + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
+ +EP + PRGKV+GGSS +N M+YVRG+ D++HW G GW A+
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E+++ + + + G L VQ PL AFV G + G+E D NG
Sbjct: 118 VLPYFKRMENSQG---GQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
E Q GF + T+ NG R S + A+L+P RPN+ + + K++++ K A+GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKR--AVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
IRAR+EVI++ ++NSP++LMLSGIGP HL + GI + D VG NLQDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGD----RLESVQSVLNYA 430
+ + QPI+L S ++ + A +G L GD ES V + A
Sbjct: 292 LEV-YIQQECTQPITLY-----SKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKA 345
Query: 431 MMGNGPLTVMGGVE----GLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWS 486
GVE F+ D G ++HG + GP
Sbjct: 346 -----------GVEYPDIQYHFLPVAIRYD-GKAAAQSHGFQAHV-----GP-------- 380
Query: 487 AIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY 546
+R +SRG + LRS NP + P I+ Y S D V++ E+ +F Y
Sbjct: 381 -----MRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Query: 547 ESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606
H+ TD + IR + + +HP GTCKMG D AVVDP RV
Sbjct: 436 R----GAEIQPGAHV--QTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVI 489
Query: 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
G+ LRV D+SI P I +GN N P IM+GEK SD I
Sbjct: 490 GVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHI 525
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 269/551 (48%), Gaps = 89/551 (16%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPC--TYPALQTSPLDW 758
E DFV++G GSAG+ +A RLSE + V+++E G + PL +P ++P + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFP-MNMETYDW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
+ +EP + GR PRGKV+GGSS +N M+YVRG+ D+D W +G GW+Y
Sbjct: 61 GFSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDIN 877
D LPYF + E+ S + GT GPL V+ + +P+ AFVE+ + G+EV D N
Sbjct: 117 DVLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
GE+Q GF T+ NG R S A AYL+P + RPN+ + + A ++ E RA
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE-----GKRAV 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH-THYQVDLTD------- 985
GV ++ GR +RARREVI++A +I SP++ ++ P H + +DL
Sbjct: 228 GVEIEAGRTFST-IRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 986 --------------------------------GPEWPDIQLFFAS---AADNDDGGLFNK 1010
G EW L F + A ++ + F +
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEW----LLFKTGDGATNHFESAAFVR 342
Query: 1011 RNNGLKDDYYAGVFEPILYR-----------DSITLAPLLLRPRSRGRIKLRTADPLDHP 1059
G++ F P+ R + P+ + R G + LR+A+P + P
Sbjct: 343 SKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSR--GSVTLRSANPREKP 400
Query: 1060 MIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWEC 1119
+I+ NY+ E D ++ I A F+P PG T D +
Sbjct: 401 VIKFNYMSHEDDWADFRHCVRLTREIFGQAA---FDPYRGAEIQPGAHVQT---DDEIDN 454
Query: 1120 QVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPT 1179
+R + + +HP GTCKMG DP AVVDP RV GV GLRV D+SI P I +GN N P+
Sbjct: 455 FIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPS 514
Query: 1180 IMIAEKACDLI 1190
IM+ EKA D I
Sbjct: 515 IMVGEKASDHI 525
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 286/576 (49%), Gaps = 64/576 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAY-LQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE + ++++E G D + +P ++ + + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
+ +EP + PRGKV+GGSS +N M+YVRG+ D++HW G GW A+
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E+++ + + + G L VQ PL AFV G + G+E D NG
Sbjct: 118 VLPYFKRMENSQG---GQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
E Q GF + T+ NG R S + A+L+P RPN+ + + K++++ K A+GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKR--AVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
IRAR+EVI++ ++NSP++LMLSGIGP HL + GI + D VG NLQDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGD----RLESVQSVLNYA 430
+ + QPI+L S ++ + A +G L GD ES V + A
Sbjct: 292 LEV-YIQQECTQPITLY-----SKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKA 345
Query: 431 MMGNGPLTVMGGVE----GLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWS 486
GVE F+ D G ++HG + GP
Sbjct: 346 -----------GVEYPDIQYHFLPVAIRYD-GKAAAQSHGFQAHV-----GP-------- 380
Query: 487 AIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY 546
+R +SRG + LRS NP + P I+ Y S D V++ E+ +F Y
Sbjct: 381 -----MRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Query: 547 ESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606
H+ TD + IR + + +HP GTCKMG D AVVDP RV
Sbjct: 436 R----GAEIQPGAHV--QTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVI 489
Query: 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
G+ LRV D+SI P I +GN N P IM+GEK SD I
Sbjct: 490 GVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHI 525
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 269/551 (48%), Gaps = 89/551 (16%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPC--TYPALQTSPLDW 758
E DFV++G GSAG+ +A RLSE + V+++E G + PL +P ++P + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFP-MNMETYDW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
+ +EP + GR PRGKV+GGSS +N M+YVRG+ D+D W +G GW+Y
Sbjct: 61 GFSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDIN 877
D LPYF + E+ S + GT GPL V+ + +P+ AFVE+ + G+EV D N
Sbjct: 117 DVLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
GE+Q GF T+ NG R S A AYL+P + RPN+ + + A ++ E RA
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE-----GKRAV 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH-THYQVDLTD------- 985
GV ++ GR +RARREVI++A +I SP++ ++ P H + +DL
Sbjct: 228 GVEIEAGRTFST-IRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 986 --------------------------------GPEWPDIQLFFAS---AADNDDGGLFNK 1010
G EW L F + A ++ + F +
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEW----LLFKTGDGATNHFESAAFVR 342
Query: 1011 RNNGLKDDYYAGVFEPILYR-----------DSITLAPLLLRPRSRGRIKLRTADPLDHP 1059
G++ F P+ R + P+ + R G + LR+A+P + P
Sbjct: 343 SKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSR--GSVTLRSANPREKP 400
Query: 1060 MIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWEC 1119
+I+ NY+ E D ++ I A F+P PG T D +
Sbjct: 401 VIKFNYMSHEDDWADFRHCVRLTREIFGQAA---FDPYRGAEIQPGAHVQT---DDEIDN 454
Query: 1120 QVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPT 1179
+R + + +HP GTCKMG DP AVVDP RV GV GLRV D+SI P I +GN N P+
Sbjct: 455 FIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPS 514
Query: 1180 IMIAEKACDLI 1190
IM+ EKA D I
Sbjct: 515 IMVGEKASDHI 525
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 286/576 (49%), Gaps = 64/576 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAY-LQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE + ++++E G D + +P ++ + + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
+ +EP + PRGKV+GGSS +N M+YVRG+ D++HW G GW A+
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E+++ + + + G L VQ PL AFV G + G+E D NG
Sbjct: 118 VLPYFKRMENSQG---GQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
E Q GF + T+ NG R S + A+L+P RPN+ + + K++++ K A+GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKR--AVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
IRAR+EVI++ ++NSP++LMLSGIGP HL + GI + D VG NLQDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGD----RLESVQSVLNYA 430
+ + QPI+L S ++ + A +G L GD ES V + A
Sbjct: 292 LEV-YIQQECTQPITLY-----SELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKA 345
Query: 431 MMGNGPLTVMGGVE----GLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWS 486
GVE F+ D G ++HG + GP
Sbjct: 346 -----------GVEYPDIQYHFLPVAIRYD-GKAAAQSHGFQAHV-----GP-------- 380
Query: 487 AIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY 546
+R +SRG + LRS NP + P I+ Y S D V++ E+ +F Y
Sbjct: 381 -----MRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Query: 547 ESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606
H+ TD + IR + + +HP GTCKMG D AVVDP RV
Sbjct: 436 R----GAEIQPGAHV--QTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVI 489
Query: 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
G+ LRV D+SI P I +GN N P IM+GEK SD I
Sbjct: 490 GVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHI 525
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 272/547 (49%), Gaps = 81/547 (14%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPC--TYPALQTSPLDW 758
E DFV++G GSAG+ +A RLSE + V+++E G + PL +P ++P + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFP-MNMETYDW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
+ +EP + GR PRGKV+GGSS +N M+YVRG+ D+D W +G GW+Y
Sbjct: 61 GFSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDIN 877
D LPYF + E+ S + GT GPL V+ + +P+ AFVE+ + G+EV D N
Sbjct: 117 DVLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
GE+Q GF T+ NG R S A AYL+P + RPN+ + + A ++ E RA
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE-----GKRAV 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH-THYQVDLT-DGPE--- 988
GV ++ GR +RARREVI++A +I SP++ ++ P H + +DL D P
Sbjct: 228 GVEIEAGRTFST-IRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 989 --------------------WPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVF---- 1024
+ ++ LF S A L K +G + + + F
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSELNLF--SKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 1025 EPILYRD-SITLAPLLLR--------------------PRSRGRIKLRTADPLDHPMIRP 1063
+ Y D P+ +R +SRG + LR+A+P + P+I+
Sbjct: 345 AGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKF 404
Query: 1064 NYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRH 1123
NY+ E D ++ I A F+P PG T D + +R
Sbjct: 405 NYMSHEDDWADFRHCVRLTREIFGQAA---FDPYRGAEIQPGAHVQT---DDEIDNFIRE 458
Query: 1124 YTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIA 1183
+ + +HP GTCKMG DP AVVDP RV GV GLRV D+SI P I +GN N P+IM+
Sbjct: 459 HVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVG 518
Query: 1184 EKACDLI 1190
EKA D I
Sbjct: 519 EKASDHI 525
>sp|A9M9H8|BETA_BRUC2 Choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=betA PE=3 SV=1
Length = 549
Score = 277 bits (708), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 286/576 (49%), Gaps = 64/576 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAY-LQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE + ++++E G D + +P ++ + + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
+ +EP + PRGKV+GGSS +N M+YVRG+ D++HW G GW A+
Sbjct: 62 FSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E+++ + + + G L VQ PL AFV G + G+E D NG
Sbjct: 118 VLPYFKRMENSQG---GQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
E Q GF + T+ NG R S + A+L+P RPN+ + + K++++ K A+GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKR--AVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
IRAR+EVI++ ++NSP++LMLSGIGP HL + GI + D VG NLQDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGD----RLESVQSVLNYA 430
+ + QPI+L S ++ + A +G L GD ES V + A
Sbjct: 292 LEV-YIQQECTQPITLY-----SELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKA 345
Query: 431 MMGNGPLTVMGGVE----GLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWS 486
GVE F+ D G ++HG + GP
Sbjct: 346 -----------GVEYPDIQYHFLPVAIRYD-GKAAAQSHGFQAHV-----GP-------- 380
Query: 487 AIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY 546
+R +SRG + LRS NP + P I+ Y S D V++ E+ +F Y
Sbjct: 381 -----MRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Query: 547 ESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606
H+ TD + IR + + +HP GTCKMG D AVVDP RV
Sbjct: 436 R----GAEIQPGAHV--QTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVI 489
Query: 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
G+ LRV D+SI P I +GN N P IM+GEK SD I
Sbjct: 490 GVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHI 525
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 272/547 (49%), Gaps = 81/547 (14%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPC--TYPALQTSPLDW 758
E DFV++G GSAG+ +A RLSE + V+++E G + PL +P ++P + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFP-MNMETYDW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
+ +EP + GR PRGKV+GGSS +N M+YVRG+ D+D W +G GW+Y
Sbjct: 61 GFSSEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DIN 877
D LPYF + E+ S + GT GPL V+ + +P+ AFVE+ + G+EV D N
Sbjct: 117 DVLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
GE+Q GF T+ NG R S A AYL+P + RPN+ + + A ++ E RA
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE-----GKRAV 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH-THYQVDL-TDGPE--- 988
GV ++ GR +RARREVI++A +I SP++ ++ P H + +DL D P
Sbjct: 228 GVEIEAGRTFST-IRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 989 --------------------WPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVF---- 1024
+ ++ LF S A L K +G + + + F
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSELNLF--SKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 1025 EPILYRD-SITLAPLLLR--------------------PRSRGRIKLRTADPLDHPMIRP 1063
+ Y D P+ +R +SRG + LR+A+P + P+I+
Sbjct: 345 AGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKF 404
Query: 1064 NYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRH 1123
NY+ E D ++ I A F+P PG T D + +R
Sbjct: 405 NYMSHEDDWADFRHCVRLTREIFGQAA---FDPYRGAEIQPGAHVQT---DDEIDNFIRE 458
Query: 1124 YTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIA 1183
+ + +HP GTCKMG DP AVVDP RV GV GLRV D+SI P I +GN N P+IM+
Sbjct: 459 HVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVG 518
Query: 1184 EKACDLI 1190
EKA D I
Sbjct: 519 EKASDHI 525
>sp|A4JJG6|BETA_BURVG Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=betA PE=3 SV=1
Length = 566
Score = 276 bits (707), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 290/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E N +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHQGLERWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFRKAE---TRDVGPNDYHGGDGPVSVTTSKPGANPLFEAMVEAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L KTRPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVAYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P D+P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCR-----SDKELDTFVRARAETAFHPSCSCKMG--YDDMAVVDDEGRVHGLD 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADRIR 533
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E N VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHQGLERW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA VE+ + GY
Sbjct: 120 TYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGANPLFEAMVEAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVAYLRG-SERATAHARREVLVCSGAIASPQL 267
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP DHP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCR---SDKELDTFVRARAETAFHPSCSCKMG--YDDMAVVDDEGRVHGLDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADRIR 533
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 285/576 (49%), Gaps = 64/576 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAY-LQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE + ++++E G D + +P ++ + + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
+ +EP + PRGKV+GGSS +N M+YVRG+ D++HW G GW A+
Sbjct: 62 FSSEPEPH----IRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E+++ + + + G L VQ PL AFV G + G+E D NG
Sbjct: 118 VLPYFKRMENSQG---GQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
E Q GF + T+ NG R S + A+L+P RPN+ + + K++++ K A+GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKR--AVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
IRAR+EVI++ ++NSP++LMLSGIGP HL + GI + D VG NLQDH
Sbjct: 232 EAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGD----RLESVQSVLNYA 430
+ + QPI+L S ++ + A +G L GD ES V + A
Sbjct: 292 LEV-YIQQECTQPITLY-----SKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKA 345
Query: 431 MMGNGPLTVMGGVE----GLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWS 486
GVE F+ D G ++HG + GP
Sbjct: 346 -----------GVEYPDIQYHFLPVAIRYD-GKAAAQSHGFQAHV-----GP-------- 380
Query: 487 AIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY 546
+R +SRG + LRS NP + P I+ Y S D V++ E+ +F Y
Sbjct: 381 -----MRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPY 435
Query: 547 ESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606
H+ TD + IR + + +HP GTCKMG D AVVDP RV
Sbjct: 436 R----GAEIQPGAHV--QTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVI 489
Query: 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
G+ LRV D+SI P I +GN N P IM+GEK S I
Sbjct: 490 GVEGLRVADSSIFPRITNGNLNGPSIMVGEKASGHI 525
Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 268/551 (48%), Gaps = 89/551 (16%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPC--TYPALQTSPLDW 758
E DFV++G GSAG+ +A RLSE + V+++E G + PL +P ++P + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFP-MNMETYDW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
+ +EP + GR PRGKV+GGSS +N M+YVRG+ D+D W +G GW+Y
Sbjct: 61 GFSSEPEPH----IRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDIN 877
D LPYF + E+ S + GT GPL V+ + +P+ AFVE+ + G+EV D N
Sbjct: 117 DVLPYFKRMEN---SQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
GE+Q GF T+ NG R S A AYL+P + RPN+ + + A ++ E RA
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE-----GKRAV 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH-THYQVDLTD------- 985
GV ++ GR +RARREVI++A +I SP++ ++ P H + +DL
Sbjct: 228 GVEIEAGRTFST-IRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 986 --------------------------------GPEWPDIQLFFAS---AADNDDGGLFNK 1010
G EW L F + A ++ + F +
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEW----LLFKTGDGATNHFESAAFVR 342
Query: 1011 RNNGLKDDYYAGVFEPILYR-----------DSITLAPLLLRPRSRGRIKLRTADPLDHP 1059
G++ F P+ R + P+ + R G + LR+A+P + P
Sbjct: 343 SKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSR--GSVTLRSANPREKP 400
Query: 1060 MIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWEC 1119
+I+ NY+ E D ++ I A F+P PG T D +
Sbjct: 401 VIKFNYMSHEDDWADFRHCVRLTREIFGQAA---FDPYRGAEIQPGAHVQT---DDEIDN 454
Query: 1120 QVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPT 1179
+R + + +HP GTCKMG DP AVVDP RV GV GLRV D+SI P I +GN N P+
Sbjct: 455 FIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPS 514
Query: 1180 IMIAEKACDLI 1190
IM+ EKA I
Sbjct: 515 IMVGEKASGHI 525
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 284/570 (49%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWS 136
+ DF+++G+GSAG+ +A RLSE +++LE GG + I LA + ++ +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + R PRGKV+GGSS +N M+YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L Y+K+ E + E + + G L VQ P PL AF+ G+E G+E D NG
Sbjct: 118 VLPYYKRMEHSHG---GEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T G R S + A+L+P RPN+ + + K++I+ N A GVE
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVEL-IRCFARKIVIE--NGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
+ + V++A +EVI+S + NSP++LMLSGIGP HL +MGI D VG NLQDH
Sbjct: 232 ERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL-NYAMMG 433
+ F + +P+SL S L + G + R + + + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLFFKRGLGISNQFESCAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG +V+ N
Sbjct: 343 SAPGVKQPDIQ-YHFLPVAISYD-GKAAAKSHGF------QVHVGYN------------L 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P I+ Y S D V++ E+ ++F Y
Sbjct: 383 SKSRGNVSLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYRG----- 437
Query: 554 PFPNCT-HIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P + TD + +R + + YHP GTCKMG + D AVVDP RV G+ LR
Sbjct: 438 --PEIQPGEKVQTDEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P I GN NAP IM GEK +D I
Sbjct: 496 VADSSIFPHITYGNLNAPSIMTGEKSADHI 525
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 158/274 (57%), Gaps = 17/274 (6%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ DFV++G GSAG+ +A RLSE V++LE GG + P +P + + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D++ WE G +GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYAD 117
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DING 878
LPY+ + E S + + GT GPL V+ +P+ AF+E+ E G+EV D NG
Sbjct: 118 VLPYYKRMEH---SHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNG 174
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T G R S A AYLRP + RPN+ + + A ++ E G RATG
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVEL-IRCFARKIVIENG-----RATG 228
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
V +++G + V V+A REVI+SA + SP++ ++
Sbjct: 229 VEIERGGRIEV-VKANREVIVSASSFNSPKLLML 261
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 1043 RSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRF-NPVLHNV 1101
+SRG + LR++DP P+IR NY+ +D + ++ I KA + P +
Sbjct: 384 KSRGNVSLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYRGPEIQ-- 441
Query: 1102 TIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRV 1161
PG + T D + +R + + YHP GTCKMG DP AVVDP RV GV GLRV
Sbjct: 442 --PGEKVQT---DEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRV 496
Query: 1162 IDASIMPTIVSGNTNAPTIMIAEKACDLI 1190
D+SI P I GN NAP+IM EK+ D I
Sbjct: 497 ADSSIFPHITYGNLNAPSIMTGEKSADHI 525
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 285/570 (50%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWS 136
+ DF+++G+GSAG+ +A RLSE +++LE GG + I LA + ++ +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + R PRGKV+GGSS +N M+YVRG+ D++ WE LG GW A+
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L Y+K+ E + + E + + G L VQ P PL AF+ G++ G+E D NG
Sbjct: 118 VLPYYKRME---HSHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T G R S + A+L+P RPN+ + + K++I+ N A GVE
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVEL-VRCFARKIVIE--NGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDH 374
+ + V+RA +EVI+S + NSP++LMLSGIGP HL +MGI D VG NLQDH
Sbjct: 232 ERGGRTEVVRANREVIVSASSFNSPKLLMLSGIGPAAHLQEMGIDVKADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL-NYAMMG 433
+ F + +P+SL S L + G + R + + + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLFFKRGLGISNQFESCAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG +V+ N
Sbjct: 343 SAPGVKQPDIQ-YHFLPVAISYD-GKAAAKSHGF------QVHVGYNLS----------- 383
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P I+ Y S D V++ E+ ++F Y
Sbjct: 384 -KSRGDVTLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYRG----- 437
Query: 554 PFPNCT-HIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P + TD + +R + + YHP GTCKMG + D AVVDP RV G+ LR
Sbjct: 438 --PEIQPGEKVRTDEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P I GN NAP IM GEK +D I
Sbjct: 496 VADSSIFPHITYGNLNAPSIMTGEKAADHI 525
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 158/274 (57%), Gaps = 17/274 (6%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ DFV++G GSAG+ +A RLSE V++LE GG + P +P + + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D+D WE G +GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYAD 117
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DING 878
LPY+ + E S + + GT GPL V+ +P+ AF+E+ + G+EV D NG
Sbjct: 118 VLPYYKRMEH---SHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNG 174
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T G R S A AYLRP + RPN+ + + A ++ E G RATG
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVEL-VRCFARKIVIENG-----RATG 228
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI 972
V +++G + V VRA REVI+SA + SP++ ++
Sbjct: 229 VEIERGGRTEV-VRANREVIVSASSFNSPKLLML 261
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 1043 RSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRF-NPVLHNV 1101
+SRG + LR++DP P+IR NY+ +D + ++ I KA + P +
Sbjct: 384 KSRGDVTLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYRGPEIQ-- 441
Query: 1102 TIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRV 1161
PG + T D + +R + + YHP GTCKMG DP AVVDP RV GV GLRV
Sbjct: 442 --PGEKVRT---DEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRV 496
Query: 1162 IDASIMPTIVSGNTNAPTIMIAEKACDLI 1190
D+SI P I GN NAP+IM EKA D I
Sbjct: 497 ADSSIFPHITYGNLNAPSIMTGEKAADHI 525
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 291/570 (51%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG-DETDISDVPVLAAY-LQLSGLDWS 136
+ DF+++G+GSAG+ +A RLSE ++++EAGG D +P A+ + + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + + R PRGKV+GGSS +N M+YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEAN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E + E + + G L VQ + PL +AFV G++ G+E D NG
Sbjct: 118 VLPYFKRMEHSHG---GEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T+ G R S + A+L+P R N+ I ++ +++I+ + A GVE
Sbjct: 175 SKQEGFGLMEQTIFGGRRWSAANAYLKPALKRDNVKI-VYGLAQRIVIE--DGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQDH 374
+N + V++A +EVI+S + NSP++LMLSGIGP HL DMGI D VG NLQDH
Sbjct: 232 ERNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMG-NGPLTVMGGDRLESVQSVLNYAMMG 433
+ F + +P+SL S L + G G ++ L + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLLSRGGLGASNQFEACAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG +V+ N
Sbjct: 343 SAPGLKQPDIQ-YHFLPVAISYD-GKAAAKSHGF------QVHVGYN------------L 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P ++ Y S D V++ E+ F Q S FH+
Sbjct: 383 SKSRGSVSLRSADPKADPVLRFNYMSHAEDWEKFRHCVRLTREI-----FGQ--SAFHDY 435
Query: 554 PFPNCT-HIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P + +D + +R + + YHP GTC+MG + D AVVDP+ RV GI LR
Sbjct: 436 RGPEIQPGEGVQSDEEIDAFLREHLESAYHPCGTCRMGAKDDPMAVVDPQTRVIGIDGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P + GN N P IM GEK +D I
Sbjct: 496 VADSSIFPHVTYGNLNGPSIMTGEKAADHI 525
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 267/554 (48%), Gaps = 95/554 (17%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCT--YPALQTSPLDW 758
+ DFV++G GSAG+ +A RLSE V+++EAGG + P +P +P + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWP-MSMKRYNW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D++ WE G GW+Y
Sbjct: 61 GYLSEPEAN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DIN 877
D LPYF + E S + + GT GPL V+ + +P+ +AFVE+ + G+E D N
Sbjct: 117 DVLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
G +Q GF T+ G R S A AYL+P + R N+ + ++ A R+ E G RAT
Sbjct: 174 GSKQEGFGLMEQTIFGGRRWSAANAYLKPALKRDNVKI-VYGLAQRIVIEDG-----RAT 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLIPNEHTHYQVDLTDGPEWPDIQLFFA 997
GV +++ + V V+A REVI+SA + SP++ ++ + G D+ +
Sbjct: 228 GVEIERNGRIEV-VKANREVIVSASSFNSPKLLMLSG--------IGPGQHLQDMGI--- 275
Query: 998 SAADNDDGGLFNKRNNGLKDDYYAGVFEPI-------LYRDSITLAPLLLRPRSRGRIK- 1049
A D G+ + ++ + +P+ + + A LL SRG +
Sbjct: 276 -AVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLL---SRGGLGA 331
Query: 1050 ---------LRTADPLDHPMIRPNYL-----YDEK-DLKTLVEGAKIGYAITRTKA---- 1090
LR+A L P I+ ++L YD K K+ +GY +++++
Sbjct: 332 SNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVSL 391
Query: 1091 ---------MKRFNPVLHNVTIPGCEHTTPL-------------------------SDAY 1116
+ RFN + H H L SD
Sbjct: 392 RSADPKADPVLRFNYMSHAEDWEKFRHCVRLTREIFGQSAFHDYRGPEIQPGEGVQSDEE 451
Query: 1117 WECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTN 1176
+ +R + + YHP GTC+MG DP AVVDP+ RV G+ GLRV D+SI P + GN N
Sbjct: 452 IDAFLREHLESAYHPCGTCRMGAKDDPMAVVDPQTRVIGIDGLRVADSSIFPHVTYGNLN 511
Query: 1177 APTIMIAEKACDLI 1190
P+IM EKA D I
Sbjct: 512 GPSIMTGEKAADHI 525
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 204/584 (34%), Positives = 285/584 (48%), Gaps = 79/584 (13%)
Query: 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG-DETDISDVPVLAAY-LQLSGLDWSY 137
YD+I+VGAGSAG V+A+RLSE + +LLLEAGG D++ +P +Y + W +
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKYAWQF 64
Query: 138 KTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEA 197
+T+ + ++ R + PRGKV+GGSS +N M+YVRG+ D++ WE G GW
Sbjct: 65 ETDAEAD----LDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQAC 120
Query: 198 LYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHT--PLAEAFVRGGEELGY-ENRDIN 254
L YF+++E N E Y G L+ T PL AF+ G+E GY E D N
Sbjct: 121 LPYFRRAE---NWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYN 177
Query: 255 GEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVE 314
G Q GF TV+NG R STS A+L K R N + V ++L++ K A+GVE
Sbjct: 178 GYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEKR--AVGVE 235
Query: 315 FVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQD 373
F + A+ EVI S G++ S Q+L LSGIGPK L G+ + L VG NLQD
Sbjct: 236 FELAGELRTCFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVGQNLQD 295
Query: 374 HVGLGGFTFLINQPISL------VQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
H+ + F + +PI+L L + +L +G + ES +
Sbjct: 296 HLEV-YFQYHCQKPITLNGKLDWFSKGLIGTEWILTRKGLG-------ATNHFESCAFIR 347
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKY------ASDGGNQIRKAHGLREDFYDEVYGPINN 481
+ A GL + N +Y G HG + GP N
Sbjct: 348 SRA--------------GLKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHV-----GP--N 386
Query: 482 KDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFS---DHHDMLTLIEGVKIILELS 538
K P SRGR+++ S NPLD P+IQ Y S D D I + IL
Sbjct: 387 K-----------PESRGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQP 435
Query: 539 KTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAV 598
FR E + I + TDA + ++ + YHP +CKMG + D AV
Sbjct: 436 AMDEFRGEEIQ---------PGINVATDAEIDQWVKENVESAYHPSCSCKMGADDDPMAV 486
Query: 599 VDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
+D RV GI NLRV+D+S+ PTI +GN NAP IM+ E+ +D+I
Sbjct: 487 LDEECRVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLI 530
Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 158/279 (56%), Gaps = 24/279 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG-EESPLSDIPC--TYPALQTSP 755
M YD+++VG GSAG V+A RLSE + VLLLEAGG ++S +P +YP + +
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYP-MNSEK 59
Query: 756 LDWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGW 815
WQ++T+ A L+GRR + PRGKV+GGSS +N M+YVRG+ D+D WE G +GW
Sbjct: 60 YAWQFETD----AEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGW 115
Query: 816 SYRDTLPYFIKSESVNISSLVD--SPYHGTQGPLSVEEFRYYS--PVTEAFVESAGELGY 871
+Y+ LPYF ++E + +D Y G GPLS + P+ AF+++ E GY
Sbjct: 116 NYQACLPYFRRAE-----NWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGY 170
Query: 872 -EVGDINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGP 930
E D NG +Q GF H T+KNG+R ST+ AYL R N + R+ E
Sbjct: 171 PETSDYNGYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLE--- 227
Query: 931 DGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA GV + + A+ EVI SAG+IGS Q+
Sbjct: 228 --EKRAVGVEFELAGELRTCF-AKNEVISSAGSIGSVQL 263
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 108/205 (52%), Gaps = 25/205 (12%)
Query: 986 GPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSR 1045
G +WP+IQ F AA DG F+ ++ + + P +P SR
Sbjct: 351 GLKWPNIQYHFLPAAMRYDG---------------QAAFDGHGFQ--VHVGPN--KPESR 391
Query: 1046 GRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPG 1105
GR+++ +A+PLD P I+ NYL E+D + + ++ I AM F PG
Sbjct: 392 GRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFR---GEEIQPG 448
Query: 1106 CEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDAS 1165
T DA + V+ + YHP +CKMG D DP AV+D RVRG+ LRV+D+S
Sbjct: 449 INVAT---DAEIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEECRVRGITNLRVVDSS 505
Query: 1166 IMPTIVSGNTNAPTIMIAEKACDLI 1190
+ PTI +GN NAPTIM+AE+A DLI
Sbjct: 506 VFPTIPNGNLNAPTIMVAERAADLI 530
>sp|A0B2F7|BETA_BURCH Choline dehydrogenase OS=Burkholderia cenocepacia (strain HI2424)
GN=betA PE=3 SV=1
Length = 566
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 289/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E + +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P D+P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCK-----SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLD 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E + VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERATAHARREVLVCSGAIASPQL 267
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP DHP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCK---SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|Q1BQE2|BETA_BURCA Choline dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054)
GN=betA PE=3 SV=1
Length = 566
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 289/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E + +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P D+P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCK-----SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLD 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E + VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERATAHARREVLVCSGAIASPQL 267
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP DHP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCK---SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|B4EHJ2|BETA_BURCJ Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=betA PE=3 SV=1
Length = 566
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 288/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E + +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKARPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L + I + DL VG
Sbjct: 236 SGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKALDIPVVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P D+P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C TD + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCK-----TDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLD 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 158/277 (57%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E + VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL ARPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKARPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERATAHARREVLVCSGAIASPQL 267
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP DHP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + T D + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCKT---DKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|B1K707|BETA_BURCC Choline dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3)
GN=betA PE=3 SV=1
Length = 566
Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 289/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E + +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P D+P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCK-----SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLD 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E + VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERATAHARREVLVCSGAIASPQL 267
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP DHP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCK---SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 274 bits (700), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 291/569 (51%), Gaps = 50/569 (8%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG-DETDISDVPVLAAY-LQLSGLDWS 136
+ DF+++G+GSAG+ +A RLSE +L++EAGG D +P A+ + + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + R PRGKV+GGSS +N M+YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E + E + + G L VQ + PL AFV G++ G+E D NG
Sbjct: 118 VLPYFKRMEHSHG---GEEGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T+ +G R S + A+L+P R N+ I ++ +++I+ + A GVE
Sbjct: 175 SKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVEI-IYGFAQRIVIE--DGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQDH 374
+ + V++A +EVI+S + NSP++LMLSGIGP +HL +MGI+ D VG NLQDH
Sbjct: 232 ERGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMG-NGPLTVMGGDRLESVQSVLNYAMMG 433
+ F + +P+SL S L + G G ++ L + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG +V+ N
Sbjct: 343 SAPGLKQPDIQ-YHFLPVAISYD-GKAAAKSHGF------QVHVGYN------------L 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P ++ Y S D V++ EL +F Y R I
Sbjct: 383 SKSRGSVTLRSPDPKADPVLRFNYMSHAEDWEKFRHCVRLTRELFGQAAFDDY--RGAEI 440
Query: 554 PFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLRV 613
P + + +D + +R + + YHP GTCKMG + D AVVDP+ RV G+ LRV
Sbjct: 441 Q-PGES---VQSDEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVEALRV 496
Query: 614 IDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
D+SI P + GN N P IM GEK +D I
Sbjct: 497 ADSSIFPHVTYGNLNGPSIMTGEKAADHI 525
Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 269/548 (49%), Gaps = 83/548 (15%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCT--YPALQTSPLDW 758
+ DFV++G GSAG+ +A RLSE VL++EAGG + P +P +P + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWP-MSMKRYNW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D++ WE G GW+Y
Sbjct: 61 GYLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DIN 877
D LPYF + E S + + GT GPL V+ + +P+ AFVE+ + G+E D N
Sbjct: 117 DVLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
G +Q GF T+ +G R S A AYL+P + R N+ + ++ A R+ E G RAT
Sbjct: 174 GSKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVEI-IYGFAQRIVIEDG-----RAT 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEHTHYQVDLTDGPEWPDIQ 993
GV +++G K V V+A REVI+SA + SP++ ++ P EH ++ + + P +
Sbjct: 228 GVEIERGGKIEV-VKANREVIVSASSFNSPKLLMLSGIGPGEHLK-EMGIEVKADRPGV- 284
Query: 994 LFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRIK---- 1049
A D + ++ + Y+ + P ++ + A LL G
Sbjct: 285 ----GANLQDHMEFYFQQVSTKPVSLYSWL--PWFWQ-GVAGAQWLLSKGGLGASNQFEA 337
Query: 1050 ---LRTADPLDHPMIRPNYL-----YDEK-DLKTLVEGAKIGYAITRTKA---------- 1090
LR+A L P I+ ++L YD K K+ +GY +++++
Sbjct: 338 CAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPK 397
Query: 1091 ---MKRFNPVLHNVTIPGCEHTTPLS---------DAYWECQV----------------R 1122
+ RFN + H H L+ D Y ++ R
Sbjct: 398 ADPVLRFNYMSHAEDWEKFRHCVRLTRELFGQAAFDDYRGAEIQPGESVQSDEEIDAFLR 457
Query: 1123 HYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMI 1182
+ + YHP GTCKMG DP AVVDP+ RV GV LRV D+SI P + GN N P+IM
Sbjct: 458 EHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVEALRVADSSIFPHVTYGNLNGPSIMT 517
Query: 1183 AEKACDLI 1190
EKA D I
Sbjct: 518 GEKAADHI 525
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 273 bits (698), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 283/576 (49%), Gaps = 64/576 (11%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GDETDISDVPVLAAY-LQLSGLDWS 136
E DF+++G+GSAG+ +A RLSE + ++++E G D + +P ++ + + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
+ TEP + PRGKV+GGSS +N M+YVRG+ DY+HW G GW A+
Sbjct: 62 FSTEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E N + + + G L +Q PL AFV G E G+E D NG
Sbjct: 118 VLPYFKRME---NSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
E Q GF + T+ NG R S + A+L+P RPN+ + + K++++ K A+GVE
Sbjct: 175 EKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGLARKIVLEGKR--AVGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQDH 374
IRAR+EVI++ ++NSP++LMLSGIGP L + GI+ + D VG NLQDH
Sbjct: 232 EAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGD----RLESVQSVLNYA 430
+ + QPI+L S ++ + A +G L GD ES + + A
Sbjct: 292 LEV-YIQQECTQPITLY-----SKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRSKA 345
Query: 431 MMGNGPLTVMGGVE----GLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWS 486
GVE F+ D G ++HG + GP
Sbjct: 346 -----------GVEYPDIQYHFLPVAIRYD-GKAAAQSHGFQAHV-----GP-------- 380
Query: 487 AIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQY 546
+R +SRG + LRS NP + P I+ Y S D V++ E+ +F Y
Sbjct: 381 -----MRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPY 435
Query: 547 ESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606
H+ +D + I+ + + +HP GTCKMG D AVVD RV
Sbjct: 436 R----GAEIQPGAHV--QSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVI 489
Query: 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
G+ LRV D+SI P I +GN N P IM+GEK SD I
Sbjct: 490 GVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHI 525
Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 272/549 (49%), Gaps = 85/549 (15%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPC--TYPALQTSPLDW 758
E DFV++G GSAG+ +A RLSE + V+++E G + PL +P ++P + DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFP-MNMETYDW 60
Query: 759 QYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYR 818
+ TEP + GR PRGKV+GGSS +N M+YVRG+ RDYD W +G GW+Y
Sbjct: 61 GFSTEPEPH----IGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYA 116
Query: 819 DTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DIN 877
D LPYF + E+ SS + GT GPL ++ + +P+ AFVE+ E G+EV D N
Sbjct: 117 DVLPYFKRMEN---SSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYN 173
Query: 878 GERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRAT 937
GE+Q GF T+ NG R S A AYL+P + RPN+ + + A ++ E RA
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGLARKIVLE-----GKRAV 227
Query: 938 GVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLIP------------------------ 973
GV ++ GR +RARREVI++A +I SP++ ++
Sbjct: 228 GVEIEAGRSFST-IRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQ 286
Query: 974 NEHTHYQVDLTD--------------------GPEWPDIQLFFAS---AADNDDGGLFNK 1010
N H +V + G EW LFF + A ++ + F +
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSKLNLFSKAKIGAEW----LFFKTGDGATNHFESAAFLR 342
Query: 1011 RNNGLKDDYYAGVFEPILYRDSITLAPLL---------LRPRSRGRIKLRTADPLDHPMI 1061
G++ F P+ R A +R +SRG + LR+A+P + P+I
Sbjct: 343 SKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVI 402
Query: 1062 RPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQV 1121
+ NY+ E D ++ I A FNP PG H SD + +
Sbjct: 403 KFNYMSHEDDWADFRHCVRLTREIFGQAA---FNPYRGAEIQPGA-HVQ--SDDEIDNFI 456
Query: 1122 RHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIM 1181
+ + + +HP GTCKMG DP AVVD RV GV GLRV D+SI P I +GN N P+IM
Sbjct: 457 KEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRVADSSIFPRITNGNLNGPSIM 516
Query: 1182 IAEKACDLI 1190
+ EKA D I
Sbjct: 517 VGEKASDHI 525
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 273 bits (698), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 281/570 (49%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWS 136
+ DF+++G+GSAG+ +A+RLSE +++LE GG + I LA + + +W
Sbjct: 2 QADFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + R PRGKV+GGSS +N M+YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEPQ----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E + E + + G L V+ PL AF+ G++ G+E D NG
Sbjct: 118 VLPYFKRMEHSHG---GEEGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEATEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T G R S + A+L+P RPN+ + + KV+I+ N A GVE
Sbjct: 175 GKQEGFGLMEQTTWMGRRWSAATAYLKPALKRPNVEL-IRCFARKVVIE--NGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKT-IQDLKVGYNLQDH 374
+ + +++A EVI+S + NSP++LMLSGIGP HL +MGI+ I VG NLQDH
Sbjct: 232 ERGGKIEIVKANSEVIVSASSFNSPKLLMLSGIGPGQHLQEMGIEVKIDRPGVGANLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMG-NGPLTVMGGDRLESVQSVLNYAMMG 433
+ F +P+SL S L + M G G + L + A +
Sbjct: 292 MEF-YFQQTSLKPVSLY--------SWLPWYMQGIVGAQWMFFKSGLGTSNQFEACAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG + +
Sbjct: 343 SAPGVKQPDIQ-YHFLPVAISYD-GKAAAKSHGFQAHVGYNL------------------ 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P I+ Y S D V++ E+ ++F Y
Sbjct: 383 SKSRGAVTLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDYRG----- 437
Query: 554 PFPNCTHIP-MYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P P + TD + +R + + YHP GTCKMG + D AVVDP RV G+ LR
Sbjct: 438 --PEIQPGPDVQTDDQIDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPDTRVIGVEGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P++ GN N P IM GEK +D I
Sbjct: 496 VADSSIFPSLTYGNLNGPSIMTGEKAADHI 525
Score = 233 bits (594), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 262/548 (47%), Gaps = 83/548 (15%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ DFV++G GSAG+ +A RLSE V++LE GG + P +P + +W
Sbjct: 2 QADFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP + LN RR PRGKVIGGSS +N M+YVRG+ D++ WE G +GW+Y D
Sbjct: 62 YLSEPEPQ----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DING 878
LPYF + E S + + GT GPL V +P+ AF+E+ + G+E D NG
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEATEDYNG 174
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T G R S A AYL+P + RPN+ + + A +V E G RATG
Sbjct: 175 GKQEGFGLMEQTTWMGRRWSAATAYLKPALKRPNVEL-IRCFARKVVIENG-----RATG 228
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEHTHYQVDLTDGPEWPDIQL 994
V +++G K + V+A EVI+SA + SP++ ++ P +H ++ + + P +
Sbjct: 229 VEIERGGKIEI-VKANSEVIVSASSFNSPKLLMLSGIGPGQHLQ-EMGIEVKIDRPGV-- 284
Query: 995 FFASAADNDDGGLFNKRNNGLKD-DYYAGVFEPILYRDSITLAPLLLRPRSRGRIK---- 1049
A+ D F + LK Y+ + Y I A + G
Sbjct: 285 ----GANLQDHMEFYFQQTSLKPVSLYSWL---PWYMQGIVGAQWMFFKSGLGTSNQFEA 337
Query: 1050 ---LRTADPLDHPMIRPNYL-----YDEK-DLKTLVEGAKIGYAITRTKA---------- 1090
LR+A + P I+ ++L YD K K+ A +GY +++++
Sbjct: 338 CAFLRSAPGVKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGAVTLRSSDPK 397
Query: 1091 ---MKRFNPVLHNVTIPGCEHTTPL-------------------------SDAYWECQVR 1122
+ RFN + H H L +D + +R
Sbjct: 398 ADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDYRGPEIQPGPDVQTDDQIDAFLR 457
Query: 1123 HYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMI 1182
+ + YHP GTCKMG DP AVVDP RV GV GLRV D+SI P++ GN N P+IM
Sbjct: 458 EHLESAYHPCGTCKMGSKDDPMAVVDPDTRVIGVEGLRVADSSIFPSLTYGNLNGPSIMT 517
Query: 1183 AEKACDLI 1190
EKA D I
Sbjct: 518 GEKAADHI 525
>sp|Q88CW6|BETA_PSEPK Choline dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betA
PE=3 SV=1
Length = 565
Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 291/576 (50%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+VGAGSAG +A RL+E +LLLEAGG + + +P A+ LQ +
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M+ R RGK +GGSS++N M Y+RGN D++ W L G W
Sbjct: 64 WAYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTE 176
Query: 252 DINGEYQTGFMVAQGTV-RNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV +NG R ST++ +L K RPNL I H+ +VL D K A
Sbjct: 177 DLNGYQQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKR--A 234
Query: 311 IGVEFV--KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
IGV ++ + +R RARKEVI+S GA+ SPQ+L SG+GP+ L + I + DL V
Sbjct: 235 IGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + M NG + ++ E+
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWWNQPAIGAEWMFNG-TGIGASNQFEAG---- 348
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ P ++ F+ +G N + K HG +
Sbjct: 349 --GFIRTRPEFKWPNIQ-YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R +RGRI+++S++P +P I Y S D +G+++ E+ + Y
Sbjct: 391 ----MRSPARGRIQVKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R + P + TD + IR ++ T +HP +CKMG TD AVVD RVHG
Sbjct: 447 GREIS---PGAD---VQTDEQLDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I++GN NA IMI EK SD I+
Sbjct: 499 MKGLRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 162/281 (57%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M E+D+++VG GSAG +A RL+E VLLLEAGG + D PA PL
Sbjct: 1 MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRF-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P ++GRR RGK +GGSS++N M Y+RGN D+D W E G
Sbjct: 60 RRYNWAYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E W+Y D LPYF K+E+ +I + YHG +GP+SV + +P+ A VE+ + GY
Sbjct: 116 EDWTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF T+ KNG R STA+ YL RPNL + H+ RV F
Sbjct: 173 PRTEDLNGYQQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLF--- 229
Query: 930 PDGQMRATGVVVKKG-RKDPVLVRARREVILSAGAIGSPQV 969
DG+ RA GV G ++ V RAR+EVI+S+GAI SPQ+
Sbjct: 230 -DGK-RAIGVTYLVGDSEERVEARARKEVIVSSGAIASPQL 268
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP+IQ F A N +G +NG+K+ + +R +RGR
Sbjct: 358 KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPARGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
I++++ DP HP I NY+ E+D + +G ++ I A+ +P PG +
Sbjct: 399 IQVKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPAL---DPYRGREISPGAD 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + T +HP +CKMG +D AVVD RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEQLDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHGMKGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I++GN NA TIMIAEK D I+
Sbjct: 511 PLIITGNLNATTIMIAEKISDKIR 534
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 284/584 (48%), Gaps = 79/584 (13%)
Query: 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG-DETDISDVPVLAAY-LQLSGLDWSY 137
YD+I+VGAGSAG V+A+RLSE + +LLLEAGG D++ +P +Y + W +
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKYAWQF 64
Query: 138 KTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEA 197
+T+ + ++ R + PRGKV+GGSS +N M+YVRG+ D++ WE G GW
Sbjct: 65 ETDAEAD----LDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQAC 120
Query: 198 LYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHT--PLAEAFVRGGEELGY-ENRDIN 254
L YF+++E N E Y G L+ T PL AF+ G+E GY E D N
Sbjct: 121 LPYFRRAE---NWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYN 177
Query: 255 GEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVE 314
G Q GF TV+NG R STS A+L K R N + V ++L++ K A+GVE
Sbjct: 178 GYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEKR--AVGVE 235
Query: 315 FVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQD 373
F + A+ EVI S G++ S Q+L LSGIGPK L G+ + L VG NLQD
Sbjct: 236 FELAGELRTCFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVHHLPGVGQNLQD 295
Query: 374 HVGLGGFTFLINQPISL------VQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
H+ + F + +PI+L L + +L +G + ES +
Sbjct: 296 HLEV-YFQYHCQKPITLNGKLDWFSKGLIGAEWILTRKGLG-------ATNHFESCAFIR 347
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKY------ASDGGNQIRKAHGLREDFYDEVYGPINN 481
+ A GL + N +Y G HG + GP N
Sbjct: 348 SRA--------------GLKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHV-----GP--N 386
Query: 482 KDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFS---DHHDMLTLIEGVKIILELS 538
K P SRGR+++ S NP D P+IQ Y S D D I + IL
Sbjct: 387 K-----------PESRGRVEIVSANPSDKPKIQFNYLSTERDRQDWRDCIRLTREILAQP 435
Query: 539 KTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAV 598
FR E + I + TDA + ++ + YHP +CKMG + D AV
Sbjct: 436 AMDEFRGEEIQ---------PGINVATDAEIDQWVKENVESAYHPSCSCKMGADDDPMAV 486
Query: 599 VDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
+D RV GI NLRV+D+S+ PTI +GN NAP IM+ E+ +D+I
Sbjct: 487 LDEECRVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLI 530
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 158/279 (56%), Gaps = 24/279 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG-EESPLSDIPC--TYPALQTSP 755
M YD+++VG GSAG V+A RLSE + VLLLEAGG ++S +P +YP + +
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYP-MNSEK 59
Query: 756 LDWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGW 815
WQ++T+ A L+GRR + PRGKV+GGSS +N M+YVRG+ D+D WE G +GW
Sbjct: 60 YAWQFETD----AEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGW 115
Query: 816 SYRDTLPYFIKSESVNISSLVD--SPYHGTQGPLSVEEFRYYS--PVTEAFVESAGELGY 871
+Y+ LPYF ++E + +D Y G GPLS + P+ AF+++ E GY
Sbjct: 116 NYQACLPYFRRAE-----NWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGY 170
Query: 872 -EVGDINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGP 930
E D NG +Q GF H T+KNG+R ST+ AYL R N + R+ E
Sbjct: 171 PETSDYNGYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLE--- 227
Query: 931 DGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA GV + + A+ EVI SAG+IGS Q+
Sbjct: 228 --EKRAVGVEFELAGELRTCF-AKNEVISSAGSIGSVQL 263
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 986 GPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSR 1045
G +WP+IQ F AA DG F+ ++ + + P +P SR
Sbjct: 351 GLKWPNIQYHFLPAAMRYDG---------------QAAFDGHGFQ--VHVGPN--KPESR 391
Query: 1046 GRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPG 1105
GR+++ +A+P D P I+ NYL E+D + + ++ I AM F PG
Sbjct: 392 GRVEIVSANPSDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFR---GEEIQPG 448
Query: 1106 CEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDAS 1165
T W V+ + YHP +CKMG D DP AV+D RVRG+ LRV+D+S
Sbjct: 449 INVATDAEIDQW---VKENVESAYHPSCSCKMGADDDPMAVLDEECRVRGITNLRVVDSS 505
Query: 1166 IMPTIVSGNTNAPTIMIAEKACDLI 1190
+ PTI +GN NAPTIM+AE+A DLI
Sbjct: 506 VFPTIPNGNLNAPTIMVAERAADLI 530
>sp|A9AMZ9|BETA_BURM1 Choline dehydrogenase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=betA PE=3 SV=1
Length = 566
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 289/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E N +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHQGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDIGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTE 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L KTRPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ ++R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGNERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P +P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P + +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN---PGAD---LKSDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDNEGRVHGLE 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 176 bits (447), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E N VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHQGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ +I + YHG GP+SV + +P+ EA VE+ + GY
Sbjct: 120 TYLDCLPYFKKAETRDIGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 EDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-NERATAHARREVLVCSGAIASPQL 267
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP HP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADLK---SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDNEGRVHGLEGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|Q39A44|BETA_BURS3 Choline dehydrogenase OS=Burkholderia sp. (strain 383) GN=betA PE=3
SV=1
Length = 566
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 294/586 (50%), Gaps = 78/586 (13%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E + +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGNGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+S L N +G L +
Sbjct: 296 NLQDHLEMY-IQYECKEPVS-----LYPALKWWNQPKIG------------------LEW 331
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEV---YGPIN-NKDVW 485
+ G G L E F+ T+ +D + + + P+ N +
Sbjct: 332 MLNGTG-LGASNHFEAGGFIRTR---------------DDDLWPNIQYHFLPVAINYNGS 375
Query: 486 SAIPM--------LLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILEL 537
+AI M +R SRGR+KLRSR+P D+P I Y ++ D + ++ E+
Sbjct: 376 NAIEMHGFQAHVGSMRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREI 435
Query: 538 SKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEA 597
+ + +Y R N P +C +D + +R + T +HP +CKMG D A
Sbjct: 436 MRQPALDRYRGRELN-PGADCK-----SDKELDAFVRARAETAFHPSCSCKMG--YDDMA 487
Query: 598 VVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
VVD RVHG+ LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 488 VVDEEGRVHGLEGLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E + VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGNGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERATAHARREVLVCSGAIASPQL 267
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 989 WPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRI 1048
WP+IQ F A N +N N + A V +R SRGR+
Sbjct: 358 WPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPSRGRV 398
Query: 1049 KLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEH 1108
KLR+ DP DHP I NY+ + D + + + I R A+ R+ N PG +
Sbjct: 399 KLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---PGADC 455
Query: 1109 TTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMP 1168
SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DASIMP
Sbjct: 456 K---SDKELDAFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLEGLRVVDASIMP 510
Query: 1169 TIVSGNTNAPTIMIAEKACDLIK 1191
I +GN NAPTIMIAEK D I+
Sbjct: 511 IITTGNLNAPTIMIAEKIADKIR 533
>sp|B2FQ89|BETA_STRMK Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
K279a) GN=betA PE=3 SV=1
Length = 560
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 287/574 (50%), Gaps = 52/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I++GAGSAG V+A RL+E + +LLLEAGG + + + +P A+ LQ +
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 65
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+YKT+P M + R + RGK +GGSS++N M Y+RGN DY++W S+ G W
Sbjct: 66 WAYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDWT 121
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G L V + L A V G + GY
Sbjct: 122 YLDCLPYFRKAE---TRDIGPNDYHGGDGPLRVTTPKAGNNELFAAMVEAGVQAGYPRTD 178
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L K A
Sbjct: 179 DLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNLTIVTHALTDRILFSGKR--A 236
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
+GV++++N Q AR+EV+L GGA+ SPQIL SG+GP D L + I + L VG
Sbjct: 237 VGVQWLRNDQPQRATARREVLLCGGAIASPQILQRSGVGPADLLRSLDIDLVHHLPGVGA 296
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL + N +G +
Sbjct: 297 NLQDHLEM-YLQYECKKPVSLA-----PALKLYNQPAIG------------------AEW 332
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+G G + E F+ + D N + H L PI +
Sbjct: 333 LFLGTG-IGASNQFEAGGFIRSDAEFDWPNL--QYHFLPVAINYNGSNPIKAHSFQMHVG 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+ P SRGRI +RS++P ++P I Y S D ++I E+ + Y R
Sbjct: 390 SMRSP-SRGRIHVRSKDPREHPSILFNYMSHEQDWREFRAAIRITREIFAQPALAPYSGR 448
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
+ P + TDA + +R ++ T YHP + KMG D AVVD + RVHG+
Sbjct: 449 EIS---PGSA---LQTDAQIDAFVREHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLE 502
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LR++DASIMP +V+GN NAP IM+ EK +D+I+
Sbjct: 503 GLRIVDASIMPQVVTGNLNAPTIMMAEKLADVIR 536
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 152/277 (54%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD++++G GSAG V+A RL+E + VLLLEAGG + L D PA PL
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRL-DFRTQMPAALAFPLQGKRY 64
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAA-GNEGW 815
+W YKT+P +N RR + RGK +GGSS++N M Y+RGN DYD W + G E W
Sbjct: 65 NWAYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDW 120
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ +I + YHG GPL V + + + A VE+ + GY
Sbjct: 121 TYLDCLPYFRKAETRDIGP---NDYHGGDGPLRVTTPKAGNNELFAAMVEAGVQAGYPRT 177
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ R+ F
Sbjct: 178 DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNLTIVTHALTDRILFS----- 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
RA GV + + P ARREV+L GAI SPQ+
Sbjct: 233 GKRAVGVQWLRNDQ-PQRATARREVLLCGGAIASPQI 268
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 25/204 (12%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP++Q F A N +G +N +K S + +R SRGR
Sbjct: 358 DWPNLQYHFLPVAINYNG------SNPIK-------------AHSFQMHVGSMRSPSRGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
I +R+ DP +HP I NY+ E+D + +I I A+ P PG
Sbjct: 399 IHVRSKDPREHPSILFNYMSHEQDWREFRAAIRITREIFAQPALA---PYSGREISPGSA 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T DA + VR + T YHP + KMG DP AVVD + RV G+ GLR++DASIM
Sbjct: 456 LQT---DAQIDAFVREHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLEGLRIVDASIM 512
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P +V+GN NAPTIM+AEK D+I+
Sbjct: 513 PQVVTGNLNAPTIMMAEKLADVIR 536
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 287/570 (50%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG-DETDISDVPVLAAY-LQLSGLDWS 136
+ DF+++G+GSAG+ +A RLSE +L++EAGG D +P A+ + + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + R PRGKV+GGSS +N M+YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDING 255
L YFK+ E + E + + G L VQ + PL AF+ G++ G+E D NG
Sbjct: 118 VLPYFKRMEHSHG---GEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T+ G R S + A+L+P R N+ I ++ +++I+ N A GVE
Sbjct: 175 SKQEGFGLMEQTIFAGRRWSAANAYLKPALKRDNVGI-VYGLARRIVIE--NGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQDH 374
+ + V++A +EVI+S + NSP++LMLSGIGP HL +MGI+ D VG NLQDH
Sbjct: 232 ERGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMG-NGPLTVMGGDRLESVQSVLNYAMMG 433
+ F + +P+SL S L + G G ++ L + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG +V+ N
Sbjct: 343 SAPGLKQPDIQ-YHFLPVAISYD-GKAAAKSHGF------QVHVGYN------------L 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P ++ Y S D V++ E+ ++F Y
Sbjct: 383 SKSRGSVTLRSPDPKADPVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAYRG----- 437
Query: 554 PFPNCT-HIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P + +D + +R + + YHP GTCKMG + D AVVDP+ RV G+ LR
Sbjct: 438 --PEIQPGEGVQSDEQIDSFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P + GN N P IM GEK +D I
Sbjct: 496 VADSSIFPHVTYGNLNGPSIMTGEKAADHI 525
Score = 236 bits (602), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 268/547 (48%), Gaps = 81/547 (14%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ DFV++G GSAG+ +A RLSE VL++EAGG + P +P + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D++ WE G GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEVG-DING 878
LPYF + E S + + GT GPL V+ + +P+ AF+E+ + G+E D NG
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNG 174
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T+ G R S A AYL+P + R N+ + ++ A R+ E G RATG
Sbjct: 175 SKQEGFGLMEQTIFAGRRWSAANAYLKPALKRDNVGI-VYGLARRIVIENG-----RATG 228
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEHTHYQVDLTDGPEWPDIQL 994
V +++G + V V+A REVI+SA + SP++ ++ P +H ++ + + P +
Sbjct: 229 VEIERGGRTEV-VKANREVIVSASSFNSPKLLMLSGIGPAKHLK-EMGIEVKADRPGV-- 284
Query: 995 FFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRIK----- 1049
A D + ++ + Y+ + P ++ + A LL G
Sbjct: 285 ---GANLQDHMEFYFQQVSTKPVSLYS--WLPWFWQ-GVAGAQWLLSKGGLGASNQFEAC 338
Query: 1050 --LRTADPLDHPMIRPNYL-----YDEK-DLKTLVEGAKIGYAITRTKA----------- 1090
LR+A L P I+ ++L YD K K+ +GY +++++
Sbjct: 339 AFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKA 398
Query: 1091 --MKRFNPVLHNVTIPGCEHTTPLS---------DAYWECQV----------------RH 1123
+ RFN + H H L+ DAY ++ R
Sbjct: 399 DPVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAYRGPEIQPGEGVQSDEQIDSFLRE 458
Query: 1124 YTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIA 1183
+ + YHP GTCKMG DP AVVDP+ RV GV GLRV D+SI P + GN N P+IM
Sbjct: 459 HLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLNGPSIMTG 518
Query: 1184 EKACDLI 1190
EKA D I
Sbjct: 519 EKAADHI 525
>sp|Q0B711|BETA_BURCM Choline dehydrogenase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=betA PE=3 SV=1
Length = 566
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 288/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E N +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGNGPVSVTTSKPGANPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGSERASAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P +P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCK-----SDKELDTFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLE 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E N VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGNGPVSVTTSKPGANPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERASAHARREVLVCSGAIASPQL 267
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP HP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCK---SDKELDTFVRARAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLEGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 292/583 (50%), Gaps = 70/583 (12%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I++GAGSAG V+A RL+E + ++LLLEAGG + + +P AY LQ +
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYN 65
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+++T+P M + R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 66 WAFETDPEPY----MNNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDWN 121
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YFK++E + + YH G ++V + L AF+R G E GY
Sbjct: 122 YLQCLPYFKRAE---TRDIGPNDYHGGDGPVSVATPKEGNNELYGAFIRAGIEAGYPATE 178
Query: 252 DINGEYQTGFM-VAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF + + T NG R ST++ +L K RPNL ++ +H T +I+ + + A
Sbjct: 179 DVNGYQQEGFGPMDRTTTPNGRRASTARGYLDIAKQRPNL--TIETHATTDVIEFEGKRA 236
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
+GV + + Q +RAR+EV+L GA+ SPQIL SG+G +HL + I + +L VG
Sbjct: 237 VGVSYERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHELPGVGE 296
Query: 370 NLQDHVGLGGFTFLINQPISLV-------QDRLESVQSVLNYAMMGNGPLTVMGGDRLES 422
NLQDH+ + + +PISL Q ++ + + + G R
Sbjct: 297 NLQDHLEM-YIQYECKKPISLYPALKWYNQPKIGAEWLFFGKGIGASNQFEAAGFIRTND 355
Query: 423 VQS--VLNYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPIN 480
+ L Y + P+ + S G +AHG +
Sbjct: 356 QEEWPNLQYHFL---PIAI---------------SYNGKSAVQAHGFQAHV--------- 388
Query: 481 NKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKT 540
++ + R R R L SR+P P I Y S D + ++I E+ +
Sbjct: 389 -----GSMRSMSRGRIR----LTSRDPKAAPSILFNYMSHDKDWQEFRDAIRITREIIEQ 439
Query: 541 RSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVD 600
+ +Y R P PN +DA + +R ++ T YHP G+CKMG D+ AVVD
Sbjct: 440 PTMDEYRGR-EISPGPNVQ-----SDAELDEFVRQHAETAYHPAGSCKMGSADDAMAVVD 493
Query: 601 PRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
RVHG+ LRVIDASIMP I +GN NAP IMI EK +D ++
Sbjct: 494 GAGRVHGLEGLRVIDASIMPVIATGNLNAPTIMIAEKMADKVR 536
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 265/551 (48%), Gaps = 81/551 (14%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD++++G GSAG V+A RL+E + +VLLLEAGG + D PA PL
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRF-DFRTQMPAALAYPLQGKRY 64
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGNEGW 815
+W ++T+P +N RR RGK +GGSS++N M Y+RGN DYD W + G E W
Sbjct: 65 NWAFETDPEPY----MNNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDW 120
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY-EV 873
+Y LPYF ++E+ +I + YHG GP+SV + + + AF+ + E GY
Sbjct: 121 NYLQCLPYFKRAETRDIGP---NDYHGGDGPVSVATPKEGNNELYGAFIRAGIEAGYPAT 177
Query: 874 GDINGERQTGF-TRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T NG R STA+ YL RPNL + H+ + FE
Sbjct: 178 EDVNGYQQEGFGPMDRTTTPNGRRASTARGYLDIAKQRPNLTIETHATTDVIEFE----- 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREV-----------ILSAGAIGSPQ---------VYLI 972
RA GV ++ + VRARREV IL +G+P+ V+ +
Sbjct: 233 GKRAVGVSYER-KGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHEL 291
Query: 973 P----NEHTHYQ----------VDLTDGPEW---PDIQ---LFFAS---AADNDDGGLFN 1009
P N H + + L +W P I LFF A++ + F
Sbjct: 292 PGVGENLQDHLEMYIQYECKKPISLYPALKWYNQPKIGAEWLFFGKGIGASNQFEAAGFI 351
Query: 1010 KRNNGLKDDYYAGVFEPILY----RDSITLAPLL-----LRPRSRGRIKLRTADPLDHPM 1060
+ N+ + F PI + ++ +R SRGRI+L + DP P
Sbjct: 352 RTNDQEEWPNLQYHFLPIAISYNGKSAVQAHGFQAHVGSMRSMSRGRIRLTSRDPKAAPS 411
Query: 1061 IRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQ 1120
I NY+ +KD + + +I I M + PG SDA +
Sbjct: 412 ILFNYMSHDKDWQEFRDAIRITREIIEQPTMDEYR---GREISPG---PNVQSDAELDEF 465
Query: 1121 VRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTI 1180
VR + T YHP G+CKMG D AVVD RV G+ GLRVIDASIMP I +GN NAPTI
Sbjct: 466 VRQHAETAYHPAGSCKMGSADDAMAVVDGAGRVHGLEGLRVIDASIMPVIATGNLNAPTI 525
Query: 1181 MIAEKACDLIK 1191
MIAEK D ++
Sbjct: 526 MIAEKMADKVR 536
>sp|B4SHV9|BETA_STRM5 Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=betA PE=3 SV=1
Length = 560
Score = 271 bits (692), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 286/574 (49%), Gaps = 52/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I++GAGSAG V+A RL+E + +LLLEAGG + + + +P A+ LQ +
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 65
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+YKT+P M + R + RGK +GGSS++N M Y+RGN DY++W S+ G W
Sbjct: 66 WAYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDWT 121
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G L V + L A V G + GY
Sbjct: 122 YLDCLPYFRKAE---TRDIGPNDYHGGEGPLRVTTPKAGNNELFAAMVEAGVQAGYPRTD 178
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L K A
Sbjct: 179 DLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNLTIVTHALTDRILFSGKR--A 236
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
+GV+++ N Q AR+EV+L GGA+ SPQIL SG+GP D L + I + L VG
Sbjct: 237 VGVQWLHNDQPQRATARREVLLCGGAIASPQILQRSGVGPADLLRSLDIDLVHHLPGVGA 296
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL + N +G +
Sbjct: 297 NLQDHLEM-YLQYECKKPVSLA-----PALKLYNQPAIG------------------AEW 332
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+G G + E F+ + D N + H L PI +
Sbjct: 333 LFLGTG-IGASNQFEAGGFIRSDTEFDWPNL--QYHFLPVAINYNGSNPIKAHSFQMHVG 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+ P SRGRI +RS++P ++P I Y S D ++I E+ + Y R
Sbjct: 390 SMRSP-SRGRIHVRSKDPREHPSILFNYMSHDQDWREFRAAIRITREIFAQPALAPYSGR 448
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
+ P + TDA + +R ++ T YHP + KMG D AVVD + RVHG+
Sbjct: 449 EIS---PGSA---LQTDAQIDAFVREHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLE 502
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LR++DASIMP +V+GN NAP IMI EK +D+I+
Sbjct: 503 GLRIVDASIMPQVVTGNLNAPTIMIAEKLADVIR 536
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 152/277 (54%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD++++G GSAG V+A RL+E + VLLLEAGG + L D PA PL
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRL-DFRTQMPAALAFPLQGKRY 64
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAA-GNEGW 815
+W YKT+P +N RR + RGK +GGSS++N M Y+RGN DYD W + G E W
Sbjct: 65 NWAYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDW 120
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ +I + YHG +GPL V + + + A VE+ + GY
Sbjct: 121 TYLDCLPYFRKAETRDIGP---NDYHGGEGPLRVTTPKAGNNELFAAMVEAGVQAGYPRT 177
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ R+ F
Sbjct: 178 DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNLTIVTHALTDRILFS----- 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
RA GV + P ARREV+L GAI SPQ+
Sbjct: 233 GKRAVGVQWLHNDQ-PQRATARREVLLCGGAIASPQI 268
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 25/204 (12%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP++Q F A N +G +N +K S + +R SRGR
Sbjct: 358 DWPNLQYHFLPVAINYNG------SNPIK-------------AHSFQMHVGSMRSPSRGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
I +R+ DP +HP I NY+ ++D + +I I A+ P PG
Sbjct: 399 IHVRSKDPREHPSILFNYMSHDQDWREFRAAIRITREIFAQPALA---PYSGREISPGSA 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T DA + VR + T YHP + KMG DP AVVD + RV G+ GLR++DASIM
Sbjct: 456 LQT---DAQIDAFVREHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLEGLRIVDASIM 512
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P +V+GN NAPTIMIAEK D+I+
Sbjct: 513 PQVVTGNLNAPTIMIAEKLADVIR 536
>sp|B1Z034|BETA_BURA4 Choline dehydrogenase OS=Burkholderia ambifaria (strain MC40-6)
GN=betA PE=3 SV=1
Length = 566
Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 288/574 (50%), Gaps = 54/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+ GAGSAG V+A RL+E N +LLLEAGG + + +P AY LQ +
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M++ R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWT 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YFKK+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFKKAE---TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K RPNL I H+ ++L D K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFDGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV +++ +R AR+EV++ GA+ SPQ+L SG+GP L ++ I + DL VG
Sbjct: 236 SGVTYLRGSERANAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVGQ 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQYECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KLRSR+P +P I Y ++ D + ++ E+ + + +Y R
Sbjct: 390 --MRSPSRGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P +C +D + +R + T +HP +CKMG D AVVD RVHG+
Sbjct: 448 ELN-PGADCK-----SDKELDTFVRSRAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLE 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I +GN NAP IMI EK +D I+
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIR 533
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 157/277 (56%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
EYD+++ G GSAG V+A RL+E N VLLLEAGG + D PA PL
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P ++ RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA V++ + GY
Sbjct: 120 TYLDCLPYFKKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL RPNL + H+ A R+ F DG
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILF----DG 232
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
+ RA+GV +G + ARREV++ +GAI SPQ+
Sbjct: 233 K-RASGVTYLRG-SERANAHARREVLVCSGAIASPQL 267
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KLR+ DP HP I NY+ + D + + + I R A+ R+ N P
Sbjct: 395 RGRVKLRSRDPNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADCK---SDKELDTFVRSRAETAFHPSCSCKMG--YDDMAVVDEEGRVHGLEGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIK 1191
SIMP I +GN NAPTIMIAEK D I+
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIR 533
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 285/570 (50%), Gaps = 52/570 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWS 136
+ DF+++G+GSAG+ +A RLSE +L++EAGG + I LA + + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 137 YKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAE 196
Y +EP + + R PRGKV+GGSS +N M+YVRG+ D+N WE LG GW A+
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 197 ALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYENR-DING 255
L YFK+ E + E + + G L VQ + PL AF+ G++ G+E D NG
Sbjct: 118 VLPYFKRMEHSHG---GEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNG 174
Query: 256 EYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEF 315
Q GF + + T+ +G R S + A+L+P R N+ + ++ K++I+ + A GVE
Sbjct: 175 SKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVGM-VYGLARKIVIE--DGRATGVEI 231
Query: 316 VKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDL-KVGYNLQDH 374
+ + V++A +EVI+S + NSP++LMLSGIGP HL DMGI D VG NLQDH
Sbjct: 232 ERGGKVEVVKATREVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDH 291
Query: 375 VGLGGFTFLINQPISLVQDRLESVQSVLNYAMMG-NGPLTVMGGDRLESVQSVLNYAMMG 433
+ F + +P+SL S L + G G ++ L + A +
Sbjct: 292 MEF-YFQQVSTKPVSLY--------SWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLR 342
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLR 493
+ P ++ F+ + D G K+HG +V+ N
Sbjct: 343 SAPGLKQPDIQ-YHFLPVAISYD-GKAAAKSHGF------QVHVGYN------------L 382
Query: 494 PRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNI 553
+SRG + LRS +P P ++ Y S D V++ E+ +F Y
Sbjct: 383 SKSRGSVTLRSPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYRG----- 437
Query: 554 PFPNCT-HIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLR 612
P + +D + +R + + YHP GTCKMG + D AVVDP+ RV G+ LR
Sbjct: 438 --PEIQPGEGVQSDEQIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLR 495
Query: 613 VIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
V D+SI P + GN N P IM GEK +D I
Sbjct: 496 VADSSIFPHVTYGNLNGPSIMTGEKAADHI 525
Score = 237 bits (605), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 265/554 (47%), Gaps = 95/554 (17%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ DFV++G GSAG+ +A RLSE VL++EAGG + P +P + +W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D++ WE G GW+Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYE-VGDING 878
LPYF + E S + + GT GPL V+ + +P+ AF+E+ + G+E D NG
Sbjct: 118 VLPYFKRMEH---SHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNG 174
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T+ +G R S A AYL+P + R N+ + ++ A ++ E G RATG
Sbjct: 175 SKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVGM-VYGLARKIVIEDG-----RATG 228
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEHTHYQVDLTDGPEWPDIQL 994
V +++G K V V+A REVI+SA + SP++ ++ P +H L D
Sbjct: 229 VEIERGGKVEV-VKATREVIVSASSFNSPKLLMLSGIGPGQH------LND--------- 272
Query: 995 FFASAADNDDGGLFNKRNNGLKDDYYAGVFEPI-------LYRDSITLAPLLLRPRSRGR 1047
A D G+ + ++ + +P+ + + A LL G
Sbjct: 273 -MGIAVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGA 331
Query: 1048 IK-------LRTADPLDHPMIRPNYL-----YDEK-DLKTLVEGAKIGYAITRTKA---- 1090
LR+A L P I+ ++L YD K K+ +GY +++++
Sbjct: 332 SNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTL 391
Query: 1091 ---------MKRFNPVLHNVTIPGCEHTTPLS---------DAY---------------- 1116
+ RFN + H H L+ DAY
Sbjct: 392 RSPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYRGPEIQPGEGVQSDEQ 451
Query: 1117 WECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTN 1176
+ +R + + YHP GTCKMG DP AVVDP+ RV GV GLRV D+SI P + GN N
Sbjct: 452 IDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLN 511
Query: 1177 APTIMIAEKACDLI 1190
P+IM EKA D I
Sbjct: 512 GPSIMTGEKAADHI 525
>sp|A5WA97|BETA_PSEP1 Choline dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=betA PE=3 SV=1
Length = 565
Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 289/576 (50%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+VGAGSAG +A RL+E +LLLEAGG + + +P A+ LQ +
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M+ R RGK +GGSS++N M Y+RGN D++ W L G W
Sbjct: 64 WAYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGDGPVSVATPKAGNNPLFHAMVEAGVQAGYPRTE 176
Query: 252 DINGEYQTGFM-VAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF + + +NG R ST++ +L K RPNL I H+ +VL D K A
Sbjct: 177 DLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKR--A 234
Query: 311 IGVEFV--KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
+GV ++ + +R RARKEVI+S GA+ SPQ+L SG+GP+ L + I + DL V
Sbjct: 235 VGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + + NG + ++ E+
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWWNQPAIGAEWLFNG-TGIGASNQFEAG---- 348
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ P ++ F+ +G N + K HG +
Sbjct: 349 --GFIRTRPEFKWPNIQ-YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R +RGRI+ +S++P +P I Y S D +G+++ E+ + Y
Sbjct: 391 ----MRSPARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R H+ TD + IR ++ T +HP +CKMG TD AVVD RVHG
Sbjct: 447 GR----EISPGAHV--QTDEELDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I++GN NA IMI EK SD I+
Sbjct: 499 MKGLRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 161/281 (57%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M E+D+++VG GSAG +A RL+E VLLLEAGG + D PA PL
Sbjct: 1 MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRF-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P ++GRR RGK +GGSS++N M Y+RGN D+D W E G
Sbjct: 60 RRYNWAYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E W+Y D LPYF K+E+ +I + YHG GP+SV + +P+ A VE+ + GY
Sbjct: 116 EDWTYLDCLPYFRKAETRDIGP---NDYHGGDGPVSVATPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF ++ KNG R STA+ YL RPNL + H+ RV F
Sbjct: 173 PRTEDLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLF--- 229
Query: 930 PDGQMRATGVVVKKG-RKDPVLVRARREVILSAGAIGSPQV 969
DG+ RA GV G ++ V RAR+EVI+S+GAI SPQ+
Sbjct: 230 -DGK-RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQL 268
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP+IQ F A N +G +NG+K+ + +R +RGR
Sbjct: 358 KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPARGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
I+ ++ DP HP I NY+ E+D + +G ++ I A+ +P PG
Sbjct: 399 IQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPAL---DPYRGREISPGAH 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + T +HP +CKMG +D AVVD RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEELDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHGMKGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I++GN NA TIMIAEK D I+
Sbjct: 511 PLIITGNLNATTIMIAEKISDKIR 534
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 284/576 (49%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
EYD+I+VGAGSAG +A RL+E E +LLLEAGG + + +P A+ LQ +
Sbjct: 4 EYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M R RGK +GGSS++N M Y+RGN DY+ W L G W
Sbjct: 64 WAYETDPEPH----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTE 176
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L K R L I H+ K+L + K A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPKGRRASTARGYLDTAKKRSTLTIVTHALTDKILFEGKR--A 234
Query: 311 IGVEFVK--NHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
+GV +++ +R RARKEVI+S GA+ SPQ+L SG+GP+ L + I + DL V
Sbjct: 235 VGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + + NG T +G +
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWWNQPAIGAEWLFNG--TGIGASNQFEAGGFI 351
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
P F+ +G N + K HG +
Sbjct: 352 RTREEFEWPNIQ------YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R SRGR++L+S++P +P I Y + D +G+++ E+ + + +
Sbjct: 391 ----MRSPSRGRVQLKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPFR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R I + TD + +R ++ T +HP +CKMG TD AVVD + RVHG
Sbjct: 447 GR------EISPGIEVQTDEQLDKFVREHAETAFHPSCSCKMG--TDDMAVVDGQGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I +GN NAP IM+ EK +D I+
Sbjct: 499 MQGLRVVDASIMPIITTGNLNAPTIMMAEKIADKIR 534
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 158/281 (56%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M EYD+++VG GSAG +A RL+E + VLLLEAGG + D PA PL
Sbjct: 1 MAQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRF-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P +NGRR RGK +GGSS++N M Y+RGN DYD W + G
Sbjct: 60 RRYNWAYETDPEPH----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E W+Y D LPYF K+E+ +I + YHG +GP+SV + +P+ A VE+ + GY
Sbjct: 116 EDWTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF T+ G R STA+ YL R L + H+ ++ FE
Sbjct: 173 PRTEDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDTAKKRSTLTIVTHALTDKILFE-- 230
Query: 930 PDGQMRATGVVVKKGR-KDPVLVRARREVILSAGAIGSPQV 969
RA GV +G ++ V RAR+EVI+S+GAI SPQ+
Sbjct: 231 ---GKRAVGVSYLQGSTEERVEARARKEVIVSSGAIASPQL 268
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 108/204 (52%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
EWP+IQ F A N +G +NG+K+ + +R SRGR
Sbjct: 358 EWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPSRGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
++L++ DP HP I NY+ E+D + +G ++ I + A+ +P PG E
Sbjct: 399 VQLKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPAL---DPFRGREISPGIE 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + VR + T +HP +CKMG +D AVVD + RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEQLDKFVREHAETAFHPSCSCKMG--TDDMAVVDGQGRVHGMQGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I +GN NAPTIM+AEK D I+
Sbjct: 511 PIITTGNLNAPTIMMAEKIADKIR 534
>sp|B0KN19|BETA_PSEPG Choline dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betA
PE=3 SV=1
Length = 565
Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 289/576 (50%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+VGAGSAG +A RL+E +LLLEAGG + + +P A+ LQ +
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M+ R RGK +GGSS++N M Y+RGN D++ W L G W
Sbjct: 64 WAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLQDWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGYPRTE 176
Query: 252 DINGEYQTGFM-VAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF + + +NG R ST++ +L K RPNL I H+ +VL D K A
Sbjct: 177 DLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFDGKR--A 234
Query: 311 IGVEFV--KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
+GV ++ + +R RARKEVI+S GA+ SPQ+L SG+GP+ L + I + DL V
Sbjct: 235 VGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + M G + ++ E+
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWWNQPAIGAEWMFKG-TGIGASNQFEAG---- 348
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ P ++ F+ +G N + K HG +
Sbjct: 349 --GFIRTRPEFKWPNIQ-YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R +RGRI+ +S++P +P I Y S D +G+++ E+ + Y
Sbjct: 391 ----MRSPARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R + P + TD + IR ++ T +HP +CKMG TD AVVD RVHG
Sbjct: 447 GREIS---PGAD---VQTDEQLDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I++GN NA IMI EK SD I+
Sbjct: 499 MKGLRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 163/281 (58%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M E+D+++VG GSAG +A RL+E VLLLEAGG + D PA PL
Sbjct: 1 MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRF-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P ++GRR RGK +GGSS++N M Y+RGN D+D W E G
Sbjct: 60 RRYNWAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
+ W+Y D LPYF K+E+ +I + YHG +GP+SV + +P+ A VE+ + GY
Sbjct: 116 QDWTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF ++ KNG R STA+ YL RPNL + H+ + RV F
Sbjct: 173 PRTEDLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLF--- 229
Query: 930 PDGQMRATGVVVKKG-RKDPVLVRARREVILSAGAIGSPQV 969
DG+ RA GV G ++ V RAR+EVI+S+GAI SPQ+
Sbjct: 230 -DGK-RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQL 268
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP+IQ F A N +G +NG+K+ + +R +RGR
Sbjct: 358 KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPARGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
I+ ++ DP HP I NY+ E+D + +G ++ I A+ +P PG +
Sbjct: 399 IQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPAL---DPYRGREISPGAD 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + T +HP +CKMG +D AVVD RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEQLDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHGMKGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I++GN NA TIMIAEK D I+
Sbjct: 511 PLIITGNLNATTIMIAEKISDKIR 534
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 286/580 (49%), Gaps = 72/580 (12%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDIS---DVPVLAAY-LQLSGLD 134
+ D+I++G+GSAG+ +A+RLSE +++LE GG TDI +P A+ + ++ +
Sbjct: 2 QADYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGG--TDIGPFIQMPAALAWPMSMNRYN 59
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGA 194
W Y +EP + + R PRGKV+GGSS +N M+YVRG+ D++ WE LG GW
Sbjct: 60 WGYLSEPEPH----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAY 115
Query: 195 AEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGYE-NRDI 253
A+ L YFK+ E + E + + G L VQ P PL AFV G++ G+E D
Sbjct: 116 ADVLPYFKRMEHSHG---GEDGWRGTDGPLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDY 172
Query: 254 NGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGV 313
NG Q GF + + T G R S + A+L+P RPN+ + + K++I+ N A GV
Sbjct: 173 NGSKQEGFGLMEQTTWRGRRWSAASAYLKPALKRPNVQL-IRCFARKIVIE--NGRATGV 229
Query: 314 EFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLKVGYNLQD 373
E + + V++A +EVI+S + NSP++LMLSGIGP HL D+GI D+KV D
Sbjct: 230 EIERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGI----DVKV-----D 280
Query: 374 HVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMG 433
G+G +QD +E + + P+ S+ S L + G
Sbjct: 281 RPGVG----------QNLQDHME-----FYFQQISTKPV---------SLYSWLPWFWQG 316
Query: 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPI----------NNKD 483
+ GL N A +R A G+++ + P+ N
Sbjct: 317 VAGAQWLFFKSGLGISNQFEAC---AFLRSAPGVKQPDIQYHFLPVAIRYDGKAAANTHG 373
Query: 484 VWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSF 543
+ L +SRG + LR+ +P P I+ Y S D V++ E+ ++F
Sbjct: 374 FQVHVGYNLS-KSRGSVTLRASDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAF 432
Query: 544 RQYESRFHNIPFPNCTHIP-MYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPR 602
QY P + TD + +R + + YHP GTCKMG + D AVVDP
Sbjct: 433 DQYRG-------PEIQPGERVQTDEEIDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPE 485
Query: 603 LRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMI 642
RV G+ LRV D+SI P + GN NAP IM GEK +D I
Sbjct: 486 TRVIGVDGLRVADSSIFPHVTYGNLNAPSIMTGEKAADHI 525
Score = 257 bits (657), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 270/547 (49%), Gaps = 81/547 (14%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE-SPLSDIPCTYP-ALQTSPLDWQ 759
+ D++++G GSAG+ +A RLSE V++LE GG + P +P + + +W
Sbjct: 2 QADYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWG 61
Query: 760 YKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRD 819
Y +EP LN RR PRGKVIGGSS +N M+YVRG+ D+D WE G +GW+Y D
Sbjct: 62 YLSEPEPH----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYAD 117
Query: 820 TLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYEV-GDING 878
LPYF + E S + + GT GPL V+ +P+ AFVE+ + G+E+ D NG
Sbjct: 118 VLPYFKRMEH---SHGGEDGWRGTDGPLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYNG 174
Query: 879 ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938
+Q GF T G R S A AYL+P + RPN+ + + A ++ E G RATG
Sbjct: 175 SKQEGFGLMEQTTWRGRRWSAASAYLKPALKRPNVQL-IRCFARKIVIENG-----RATG 228
Query: 939 VVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI----PNEH-----THYQVD------- 982
V +++G + V V+A REVI+SA + SP++ ++ P H +VD
Sbjct: 229 VEIERGGRIEV-VKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQN 287
Query: 983 LTDGPEWPDIQL-------------FFASAADNDDGGLFNKRNNGLKDDYYAGVF---EP 1026
L D E+ Q+ F+ A LF K G+ + + A F P
Sbjct: 288 LQDHMEFYFQQISTKPVSLYSWLPWFWQGVAGAQ--WLFFKSGLGISNQFEACAFLRSAP 345
Query: 1027 ILYRDSIT--LAPLLLR--------------------PRSRGRIKLRTADPLDHPMIRPN 1064
+ + I P+ +R +SRG + LR +DP P+IR N
Sbjct: 346 GVKQPDIQYHFLPVAIRYDGKAAANTHGFQVHVGYNLSKSRGSVTLRASDPKADPVIRFN 405
Query: 1065 YLYDEKDLKTLVEGAKIGYAITRTKAMKRF-NPVLHNVTIPGCEHTTPLSDAYWECQVRH 1123
Y+ +D + ++ I KA ++ P + PG T D + +R
Sbjct: 406 YMSHPEDWEKFRHCVRLTREIFGQKAFDQYRGPEIQ----PGERVQT---DEEIDAFLRE 458
Query: 1124 YTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIA 1183
+ + YHP GTCKMG DP AVVDP RV GV GLRV D+SI P + GN NAP+IM
Sbjct: 459 HLESAYHPCGTCKMGSKDDPMAVVDPETRVIGVDGLRVADSSIFPHVTYGNLNAPSIMTG 518
Query: 1184 EKACDLI 1190
EKA D I
Sbjct: 519 EKAADHI 525
>sp|Q1IG70|BETA_PSEE4 Choline dehydrogenase OS=Pseudomonas entomophila (strain L48)
GN=betA PE=3 SV=1
Length = 565
Score = 266 bits (681), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 289/576 (50%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+VGAGSAG +A RL+E + +LLLEAGG + + +P A+ LQ +
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M+ R RGK +GGSS++N M Y+RGN D++ W L G W
Sbjct: 64 WAYETDPEPF----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGYPRTE 176
Query: 252 DINGEYQTGFM-VAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF + + + G R ST++ +L K RPNL I H+ +VL D K A
Sbjct: 177 DLNGYQQEGFGPMDRSVTKKGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFDGKR--A 234
Query: 311 IGVEFV--KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
+GV ++ + +R RARKEVI+S GA+ SPQ+L SG+GP+ L + I + DL V
Sbjct: 235 VGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + + NG + ++ E+
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWWNQPAIGAEWLFNG-TGIGASNQFEAG---- 348
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ P ++ F+ +G N + K HG +
Sbjct: 349 --GFIRTRPEFKWPNIQ-YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R +RGRI+ +S++P +P I Y S D +G+++ E+ + +
Sbjct: 391 ----MRSPARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDAFR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R H+ TD + IR ++ T +HP +CKMG TD AVVD RVHG
Sbjct: 447 GR----EISPGAHV--QTDEELDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I++GN NA IMI EK SD I+
Sbjct: 499 MQGLRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 163/281 (58%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M E+D+++VG GSAG +A RL+E + VLLLEAGG + D PA PL
Sbjct: 1 MSKEFDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGGPDYRF-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P ++GRR RGK +GGSS++N M Y+RGN D+D W E G
Sbjct: 60 RRYNWAYETDPEPF----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E W+Y D LPYF K+E+ +I + YHG +GP+SV + +P+ A VE+ + GY
Sbjct: 116 EDWTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF ++ K G R STA+ YL RPNL + H+ + RV F
Sbjct: 173 PRTEDLNGYQQEGFGPMDRSVTKKGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLF--- 229
Query: 930 PDGQMRATGVVVKKG-RKDPVLVRARREVILSAGAIGSPQV 969
DG+ RA GV G ++ V RAR+EVI+S+GAI SPQ+
Sbjct: 230 -DGK-RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQL 268
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
+WP+IQ F A N +G +NG+K+ + +R +RGR
Sbjct: 358 KWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPARGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
I+ ++ DP HP I NY+ E+D + +G ++ I A+ F PG
Sbjct: 399 IQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDAFR---GREISPGAH 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + T +HP +CKMG +D AVVD RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEELDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHGMQGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I++GN NA TIMIAEK D I+
Sbjct: 511 PLIITGNLNATTIMIAEKISDKIR 534
>sp|Q3K5H3|BETA_PSEPF Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=betA PE=3 SV=1
Length = 567
Score = 266 bits (680), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 286/576 (49%), Gaps = 56/576 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+VGAGSAG +A RL+E E +LLLEAGG + + +P A+ LQ +
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWG 193
W+Y+T+P M+ R RGK +GGSS++N M Y+RGN DY+ W L G W
Sbjct: 64 WAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWS 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + PL A V G + GY
Sbjct: 120 YLDCLPYFRKAE---TRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTE 176
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV NG R ST++ +L K R L I H+ KVL + K A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPNGRRASTARGYLDVAKKRSTLTIVTHALTDKVLFEGKR--A 234
Query: 311 IGVEFV--KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-V 367
+GV ++ +R RARKEVI+ GA+ SPQ+L SG+GP L + I + DL V
Sbjct: 235 VGVRYLVGAAEERVEARARKEVIVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPGV 294
Query: 368 GYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVL 427
G NLQDH+ L + QP+SL L Q + + NG + ++ E+
Sbjct: 295 GENLQDHLEL-YLQYACTQPVSLYPSLLWYNQPAIGAEWLFNG-TGIGASNQFEAG---- 348
Query: 428 NYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSA 487
+ P ++ F+ +G N + K HG +
Sbjct: 349 --GFIRTRPEFEWPNIQ-YHFLPVAINYNGSNGV-KEHGFQAHMGS-------------- 390
Query: 488 IPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYE 547
+R SRGR++++S++P +P I Y + D +G+++ E+ + + +
Sbjct: 391 ----MRSPSRGRVQVKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDAFR 446
Query: 548 SRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHG 607
R I + TD + IR ++ T +HP +CKMG TD AVVD RVHG
Sbjct: 447 GR------EISPGIEVQTDEQLDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHG 498
Query: 608 IGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
+ LRV+DASIMP I +GN NAP IM+ EK +D I+
Sbjct: 499 MQGLRVVDASIMPIITTGNLNAPTIMMAEKIADKIR 534
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 156/281 (55%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M E+D+++VG GSAG +A RL+E + VLLLEAGG + D PA PL
Sbjct: 1 MSQEFDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRF-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P ++GRR RGK +GGSS++N M Y+RGN DYD W + G
Sbjct: 60 RRYNWAYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E WSY D LPYF K+E+ +I + YHG GP+SV + +P+ A VE+ + GY
Sbjct: 116 EDWSYLDCLPYFRKAETRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF T+ NG R STA+ YL R L + H+ +V FE
Sbjct: 173 PRTEDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDVAKKRSTLTIVTHALTDKVLFE-- 230
Query: 930 PDGQMRATGVVVKKG-RKDPVLVRARREVILSAGAIGSPQV 969
RA GV G ++ V RAR+EVI+ +GAI SPQ+
Sbjct: 231 ---GKRAVGVRYLVGAAEERVEARARKEVIVCSGAIASPQL 268
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 988 EWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGR 1047
EWP+IQ F A N +G +NG+K+ + +R SRGR
Sbjct: 358 EWPNIQYHFLPVAINYNG------SNGVKEHGFQAHMGS-------------MRSPSRGR 398
Query: 1048 IKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCE 1107
+++++ DP HP I NY+ E+D + +G ++ I + A+ F PG E
Sbjct: 399 VQVKSKDPRQHPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDAFR---GREISPGIE 455
Query: 1108 HTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIM 1167
T D + +R + T +HP +CKMG +D AVVD RV G+ GLRV+DASIM
Sbjct: 456 VQT---DEQLDKFIREHAETAFHPSCSCKMG--TDDMAVVDGEGRVHGMQGLRVVDASIM 510
Query: 1168 PTIVSGNTNAPTIMIAEKACDLIK 1191
P I +GN NAPTIM+AEK D I+
Sbjct: 511 PIITTGNLNAPTIMMAEKIADKIR 534
>sp|Q3JLL7|BETA_BURP1 Choline dehydrogenase OS=Burkholderia pseudomallei (strain 1710b)
GN=betA PE=3 SV=1
Length = 565
Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 284/575 (49%), Gaps = 54/575 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+ GAGSAG V+A RL+E +LLLEAGG + + +P AY LQ +
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M H R RGK +GGSS++N M Y+RGN DY++W + G W
Sbjct: 65 WAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKGLEDWA 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFRKAE---TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L + RPNL I H+ ++L K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFSGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV F+ R AR+EV++ GA+ SPQ+L SG+GP + L ++ I + DL VG
Sbjct: 236 TGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVGR 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + F +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQFECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KL+SR+P +P I Y ++ D + ++ E+ + + ++ R
Sbjct: 390 --MRSPSRGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRFRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P + +D + +R + T +HP +CKMG D AVVD RVHGI
Sbjct: 448 ELN---PGAD---LKSDNELDTFVRARAETAFHPSCSCKMG--YDDMAVVDNEGRVHGID 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQ 644
LRV+DASIMP I +GN NAP IMI EK +D I++
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADRIRK 534
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 153/277 (55%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
E+D+++ G GSAG V+A RL+E VLLLEAGG + D PA PL
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P +N RR RGK +GGSS++N M Y+RGN DYD W G E W
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKGLEDW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA VE+ + GY
Sbjct: 120 AYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL ARPNL + H+ A R+ F
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFS----- 231
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
RATGV G V ARREV++ +GAI SPQ+
Sbjct: 232 GKRATGVTFLHGSAR-VTAHARREVLVCSGAIASPQL 267
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 101/208 (48%), Gaps = 27/208 (12%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KL++ DP HP I NY+ + D + + + I R A+ RF N P
Sbjct: 395 RGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRFRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADLK---SDNELDTFVRARAETAFHPSCSCKMGYDD--MAVVDNEGRVHGIDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIKE 1192
SIMP I +GN NAPTIMIAEK D I++
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADRIRK 534
>sp|Q63KK7|BETA_BURPS Choline dehydrogenase OS=Burkholderia pseudomallei (strain K96243)
GN=betA PE=3 SV=1
Length = 565
Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 283/575 (49%), Gaps = 54/575 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I+ GAGSAG V+A RL+E +LLLEAGG + + +P AY LQ +
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWG 193
W+Y+T+P M H R RGK +GGSS++N M Y+RGN DY++W + W
Sbjct: 65 WAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKALEDWA 120
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEA-PWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E + + YH G ++V + P PL EA V G + GY
Sbjct: 121 YLDCLPYFRKAE---TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTD 177
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L + RPNL I H+ ++L K A
Sbjct: 178 DLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFSGKR--A 235
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
GV F+ R AR+EV++ GA+ SPQ+L SG+GP + L ++ I + DL VG
Sbjct: 236 TGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRELDIPVVLDLPGVGR 295
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + F +P+SL Q + M NG T +G +
Sbjct: 296 NLQDHLEM-YIQFECKEPVSLYPALKWWNQPKIGLEWMLNG--TGLGASNHFEAGGFIR- 351
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P + F+ +G N I + HG +
Sbjct: 352 -TRDDDPWPNI----QYHFLPVAINYNGSNAI-EMHGFQAHVGS---------------- 389
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGR+KL+SR+P +P I Y ++ D + ++ E+ + + ++ R
Sbjct: 390 --MRSPSRGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRFRGR 447
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
N P + +D + +R + T +HP +CKMG D AVVD RVHGI
Sbjct: 448 ELN---PGAD---LKSDNELDTFVRARAETAFHPSCSCKMG--YDDMAVVDNEGRVHGID 499
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQ 644
LRV+DASIMP I +GN NAP IMI EK +D I+Q
Sbjct: 500 GLRVVDASIMPIITTGNLNAPTIMIAEKIADRIRQ 534
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 152/277 (54%), Gaps = 23/277 (8%)
Query: 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL----- 756
E+D+++ G GSAG V+A RL+E VLLLEAGG + D PA PL
Sbjct: 5 EFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRF-DFRTQMPAALAYPLQGRRY 63
Query: 757 DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGW 815
+W Y+T+P +N RR RGK +GGSS++N M Y+RGN DYD W E W
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKALEDW 119
Query: 816 SYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSPVTEAFVESAGELGY-EV 873
+Y D LPYF K+E+ ++ + YHG GP+SV + +P+ EA VE+ + GY
Sbjct: 120 AYLDCLPYFRKAETRDVGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 874 GDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDG 932
D+NG +Q GF T+ G R STA+ YL ARPNL + H+ A R+ F
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILFS----- 231
Query: 933 QMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969
RATGV G V ARREV++ +GAI SPQ+
Sbjct: 232 GKRATGVTFLHGSAR-VTAHARREVLVCSGAIASPQL 267
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 101/208 (48%), Gaps = 27/208 (12%)
Query: 985 DGPEWPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRS 1044
D WP+IQ F A N +N N + A V +R S
Sbjct: 354 DDDPWPNIQYHFLPVAIN-----YNGSNAIEMHGFQAHVGS--------------MRSPS 394
Query: 1045 RGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIP 1104
RGR+KL++ DP HP I NY+ + D + + + I R A+ RF N P
Sbjct: 395 RGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRFRGRELN---P 451
Query: 1105 GCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDA 1164
G + SD + VR T +HP +CKMG D AVVD RV G+ GLRV+DA
Sbjct: 452 GADLK---SDNELDTFVRARAETAFHPSCSCKMG--YDDMAVVDNEGRVHGIDGLRVVDA 506
Query: 1165 SIMPTIVSGNTNAPTIMIAEKACDLIKE 1192
SIMP I +GN NAPTIMIAEK D I++
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADRIRQ 534
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 286/574 (49%), Gaps = 52/574 (9%)
Query: 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI---SDVPVLAAY-LQLSGLD 134
E+D+I++GAGSAG V+A RL+E + +LLLEAGG + + + +P A+ LQ +
Sbjct: 4 EFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYN 63
Query: 135 WSYKTEPSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHW-ESLGNPGWG 193
W+Y+T+P M + R RGK +GGSS++N M Y+RGN D+++W ++ G W
Sbjct: 64 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLEDWT 119
Query: 194 AAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQE-APWHTPLAEAFVRGGEELGY-ENR 251
+ L YF+K+E ++ + YH G ++V + PL A V G + GY
Sbjct: 120 YHDCLPYFRKAE---SRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTD 176
Query: 252 DINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMA 310
D+NG Q GF TV G R ST++ +L + RPNL I H+ ++L D K
Sbjct: 177 DLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILFDGKRASG 236
Query: 311 IGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGY 369
+ + RAR+EV+L GA+ SPQIL SG+GP L ++ I + +L VG
Sbjct: 237 VSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLRELDIALVHELPGVGQ 296
Query: 370 NLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNY 429
NLQDH+ + + QP+SL +LN G G + G+ + +
Sbjct: 297 NLQDHLEM-YLQYACTQPVSLY-----PALKLLNQP--GIGAQWLFTGNGIGASNQFEAG 348
Query: 430 AMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIP 489
+ P ++ F+ +G N + + HG +
Sbjct: 349 GFIRTRPEFAWPNIQ-FHFLPVAINYNGSNAVNE-HGFQAHVGS---------------- 390
Query: 490 MLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESR 549
+R SRGRI+L+S++P +P I Y S D + ++I E+ + Y R
Sbjct: 391 --MRSPSRGRIQLKSKDPRQHPSILFNYMSHEQDWQEFRDAIRITREIMAQPALDSYRGR 448
Query: 550 FHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIG 609
P +C +DA + IR ++ T +HP +CKMG D AVVD + RVHG+
Sbjct: 449 -EISPGIDCQ-----SDAELDAFIREHAETAFHPSCSCKMG--EDDMAVVDGQGRVHGVQ 500
Query: 610 NLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIK 643
LRV+DASIMP I++GN NA IM+ EK +D I+
Sbjct: 501 GLRVVDASIMPEIITGNLNATTIMMAEKIADRIR 534
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 160/281 (56%), Gaps = 23/281 (8%)
Query: 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPL-- 756
M E+D++++G GSAG V+A RL+E + VLLLEAGG + L D PA PL
Sbjct: 1 MSHEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRL-DFRTQMPAALAFPLQG 59
Query: 757 ---DWQYKTEPNDRACLGLNGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAW-EAAGN 812
+W Y+T+P +N RR RGK +GGSS++N M Y+RGN D+D W +A G
Sbjct: 60 RRYNWAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGL 115
Query: 813 EGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRY-YSPVTEAFVESAGELGY 871
E W+Y D LPYF K+ES +I + YHG GP+SV + +P+ A VE+ + GY
Sbjct: 116 EDWTYHDCLPYFRKAESRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGY 172
Query: 872 -EVGDINGERQTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPG 929
D+NG +Q GF T+ G R STA+ YL RPNL + H+ R+ F
Sbjct: 173 PRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILF--- 229
Query: 930 PDGQMRATGVVVKKGR-KDPVLVRARREVILSAGAIGSPQV 969
DG+ RA+GV G D RARREV+L AGAI SPQ+
Sbjct: 230 -DGK-RASGVSYLIGNANDATEARARREVLLCAGAIASPQI 268
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 989 WPDIQLFFASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRI 1048
WP+IQ F A N +N N + + A V +R SRGRI
Sbjct: 359 WPNIQFHFLPVAIN-----YNGSNAVNEHGFQAHVGS--------------MRSPSRGRI 399
Query: 1049 KLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEH 1108
+L++ DP HP I NY+ E+D + + +I I A+ + PG +
Sbjct: 400 QLKSKDPRQHPSILFNYMSHEQDWQEFRDAIRITREIMAQPALDSYR---GREISPGIDC 456
Query: 1109 TTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMP 1168
SDA + +R + T +HP +CKMG D AVVD + RV GV GLRV+DASIMP
Sbjct: 457 Q---SDAELDAFIREHAETAFHPSCSCKMGEDD--MAVVDGQGRVHGVQGLRVVDASIMP 511
Query: 1169 TIVSGNTNAPTIMIAEKACDLIKE 1192
I++GN NA TIM+AEK D I++
Sbjct: 512 EIITGNLNATTIMMAEKIADRIRD 535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 523,116,003
Number of Sequences: 539616
Number of extensions: 23960832
Number of successful extensions: 62871
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 59778
Number of HSP's gapped (non-prelim): 1327
length of query: 1306
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1176
effective length of database: 121,419,379
effective search space: 142789189704
effective search space used: 142789189704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)