Query psy1043
Match_columns 1306
No_of_seqs 730 out of 4694
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:42:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1043.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1043hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 5.6E-87 1.9E-91 821.9 40.0 532 79-645 2-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 2.4E-84 8.1E-89 798.8 41.5 537 78-647 18-580 (583)
3 3q9t_A Choline dehydrogenase a 100.0 5.6E-83 1.9E-87 788.0 40.9 529 78-648 5-575 (577)
4 1gpe_A Protein (glucose oxidas 100.0 1.2E-78 4.2E-83 757.0 29.8 531 78-648 23-585 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 1.6E-74 5.6E-79 715.4 45.0 508 78-648 12-532 (546)
6 3t37_A Probable dehydrogenase; 100.0 3.5E-74 1.2E-78 716.8 43.4 499 78-643 16-521 (526)
7 3fim_B ARYL-alcohol oxidase; A 100.0 2.3E-68 7.7E-73 656.5 37.2 481 702-1193 2-565 (566)
8 3qvp_A Glucose oxidase; oxidor 100.0 3.2E-67 1.1E-71 646.5 40.1 483 701-1195 18-580 (583)
9 1ju2_A HydroxynitrIle lyase; f 100.0 4.6E-66 1.6E-70 638.3 32.1 476 77-645 24-516 (536)
10 3q9t_A Choline dehydrogenase a 100.0 2.7E-64 9.1E-69 621.7 33.5 472 701-1196 5-575 (577)
11 1kdg_A CDH, cellobiose dehydro 100.0 2.3E-62 8E-67 610.5 29.1 498 78-647 6-544 (546)
12 1gpe_A Protein (glucose oxidas 100.0 4E-61 1.4E-65 599.4 37.0 482 701-1195 23-584 (587)
13 3t37_A Probable dehydrogenase; 100.0 1.5E-60 5.2E-65 593.8 39.9 467 701-1192 16-522 (526)
14 2jbv_A Choline oxidase; alcoho 100.0 1.3E-60 4.4E-65 591.0 38.2 475 701-1195 12-531 (546)
15 1n4w_A CHOD, cholesterol oxida 100.0 4.1E-59 1.4E-63 573.6 26.5 456 78-648 4-502 (504)
16 1coy_A Cholesterol oxidase; ox 100.0 7.7E-58 2.6E-62 562.1 25.9 454 77-647 9-506 (507)
17 1ju2_A HydroxynitrIle lyase; f 100.0 1.7E-52 5.9E-57 517.1 33.4 454 700-1196 24-520 (536)
18 1n4w_A CHOD, cholesterol oxida 100.0 4.1E-49 1.4E-53 484.7 33.3 437 701-1195 4-501 (504)
19 1coy_A Cholesterol oxidase; ox 100.0 1.7E-49 5.9E-54 487.9 29.7 436 700-1194 9-505 (507)
20 1kdg_A CDH, cellobiose dehydro 100.0 6.4E-49 2.2E-53 489.4 32.5 455 701-1195 6-544 (546)
21 3pl8_A Pyranose 2-oxidase; sub 100.0 6.2E-45 2.1E-49 455.6 28.2 503 76-648 43-615 (623)
22 3pl8_A Pyranose 2-oxidase; sub 100.0 8.8E-36 3E-40 372.9 31.0 449 698-1201 42-620 (623)
23 4at0_A 3-ketosteroid-delta4-5a 99.5 2.9E-13 9.9E-18 166.5 15.4 66 900-971 204-271 (510)
24 4at0_A 3-ketosteroid-delta4-5a 99.4 5.5E-12 1.9E-16 155.1 20.1 64 281-345 208-272 (510)
25 4dgk_A Phytoene dehydrogenase; 99.4 1E-11 3.4E-16 153.0 19.2 61 902-972 225-285 (501)
26 1y0p_A Fumarate reductase flav 99.2 2.5E-11 8.5E-16 151.4 13.4 190 701-966 125-318 (571)
27 1qo8_A Flavocytochrome C3 fuma 99.2 1.7E-11 5.7E-16 152.8 11.7 192 701-968 120-315 (566)
28 2bs2_A Quinol-fumarate reducta 99.1 2E-10 6.9E-15 143.9 15.8 55 904-966 164-221 (660)
29 2h88_A Succinate dehydrogenase 99.1 3.6E-10 1.2E-14 140.6 16.6 56 903-966 160-218 (621)
30 3dme_A Conserved exported prot 99.1 3.6E-11 1.2E-15 141.4 7.3 60 903-971 155-214 (369)
31 1y0p_A Fumarate reductase flav 99.1 4.4E-10 1.5E-14 140.1 16.6 61 281-343 261-323 (571)
32 2wdq_A Succinate dehydrogenase 99.1 4.6E-10 1.6E-14 139.6 16.3 56 903-966 148-207 (588)
33 1qo8_A Flavocytochrome C3 fuma 99.1 4.3E-10 1.5E-14 140.0 15.2 59 283-343 258-317 (566)
34 1y56_B Sarcosine oxidase; dehy 99.1 4E-10 1.4E-14 133.4 12.9 56 903-970 154-209 (382)
35 3dje_A Fructosyl amine: oxygen 99.1 2.1E-10 7.3E-15 138.4 10.3 57 903-970 166-225 (438)
36 1chu_A Protein (L-aspartate ox 99.1 6.7E-10 2.3E-14 136.8 14.2 60 904-966 144-209 (540)
37 1d4d_A Flavocytochrome C fumar 99.0 4.4E-10 1.5E-14 139.8 11.9 64 900-970 257-323 (572)
38 3nyc_A D-arginine dehydrogenas 99.0 7.5E-10 2.6E-14 130.8 13.1 55 903-970 159-213 (381)
39 3ps9_A TRNA 5-methylaminomethy 99.0 6.3E-10 2.1E-14 141.7 11.6 55 904-970 423-477 (676)
40 3gyx_A Adenylylsulfate reducta 99.0 6.8E-10 2.3E-14 139.0 11.1 58 904-966 172-234 (662)
41 2gag_B Heterotetrameric sarcos 99.0 6E-10 2E-14 133.0 10.1 56 903-970 179-234 (405)
42 1kf6_A Fumarate reductase flav 99.0 2.1E-09 7E-14 134.0 14.4 57 903-967 139-199 (602)
43 2bs2_A Quinol-fumarate reducta 99.0 3.2E-09 1.1E-13 133.0 15.6 52 285-339 168-221 (660)
44 2h88_A Succinate dehydrogenase 99.0 6.3E-09 2.1E-13 129.4 17.7 53 284-339 164-218 (621)
45 2oln_A NIKD protein; flavoprot 98.9 2.3E-09 7.8E-14 127.6 12.6 35 701-736 3-37 (397)
46 2wdq_A Succinate dehydrogenase 98.9 5.6E-09 1.9E-13 129.8 15.8 54 284-339 152-207 (588)
47 1jnr_A Adenylylsulfate reducta 98.9 5.1E-09 1.8E-13 131.7 15.2 60 902-966 155-219 (643)
48 1d4d_A Flavocytochrome C fumar 98.9 8.1E-09 2.8E-13 128.4 16.7 63 281-345 261-325 (572)
49 2i0z_A NAD(FAD)-utilizing dehy 98.9 4E-09 1.4E-13 127.3 13.4 58 901-968 137-194 (447)
50 3pvc_A TRNA 5-methylaminomethy 98.9 4.1E-09 1.4E-13 134.2 14.1 99 621-736 180-297 (689)
51 3dme_A Conserved exported prot 98.9 1.3E-09 4.3E-14 128.2 8.2 60 284-348 159-219 (369)
52 1y56_B Sarcosine oxidase; dehy 98.9 2E-09 7E-14 127.2 9.7 57 284-348 158-214 (382)
53 1chu_A Protein (L-aspartate ox 98.9 1.1E-08 3.9E-13 125.8 16.3 52 287-339 151-209 (540)
54 1pj5_A N,N-dimethylglycine oxi 98.9 3.4E-09 1.2E-13 138.0 12.0 56 903-970 156-211 (830)
55 1ryi_A Glycine oxidase; flavop 98.9 1.5E-09 5.2E-14 128.3 7.1 37 699-736 14-50 (382)
56 2gf3_A MSOX, monomeric sarcosi 98.9 1.3E-08 4.4E-13 120.6 15.1 34 702-736 3-36 (389)
57 3nyc_A D-arginine dehydrogenas 98.9 1.3E-08 4.4E-13 120.2 15.0 196 78-348 8-218 (381)
58 3axb_A Putative oxidoreductase 98.9 1.2E-09 4.2E-14 132.1 6.2 35 700-735 21-56 (448)
59 3da1_A Glycerol-3-phosphate de 98.8 7.7E-09 2.6E-13 128.1 12.7 59 904-971 176-237 (561)
60 4dgk_A Phytoene dehydrogenase; 98.8 1.2E-08 4.3E-13 125.2 14.4 57 283-345 229-285 (501)
61 2rgh_A Alpha-glycerophosphate 98.8 9.8E-09 3.3E-13 127.4 13.2 56 906-970 196-254 (571)
62 3da1_A Glycerol-3-phosphate de 98.8 1.1E-08 3.6E-13 126.8 12.9 62 284-349 179-242 (561)
63 3v76_A Flavoprotein; structura 98.8 3.3E-09 1.1E-13 126.1 7.6 58 900-969 134-191 (417)
64 2oln_A NIKD protein; flavoprot 98.8 2.8E-08 9.6E-13 118.1 15.0 35 78-113 3-37 (397)
65 1kf6_A Fumarate reductase flav 98.8 4.8E-08 1.6E-12 121.7 17.7 52 286-340 146-199 (602)
66 3dje_A Fructosyl amine: oxygen 98.8 4.8E-09 1.6E-13 126.5 8.4 54 283-343 169-225 (438)
67 2gag_B Heterotetrameric sarcos 98.8 7.6E-09 2.6E-13 123.3 9.5 57 284-348 183-239 (405)
68 2qcu_A Aerobic glycerol-3-phos 98.8 2.2E-08 7.5E-13 122.6 13.3 57 904-970 155-214 (501)
69 2e5v_A L-aspartate oxidase; ar 98.8 1.4E-08 4.7E-13 123.2 11.0 52 904-965 125-176 (472)
70 2uzz_A N-methyl-L-tryptophan o 98.8 2.9E-08 1E-12 116.8 13.6 34 702-736 2-35 (372)
71 3gyx_A Adenylylsulfate reducta 98.8 1.3E-08 4.6E-13 127.3 10.9 50 289-339 182-234 (662)
72 2gqf_A Hypothetical protein HI 98.8 1.3E-08 4.3E-13 120.7 9.7 36 700-736 2-37 (401)
73 1pj5_A N,N-dimethylglycine oxi 98.7 2E-08 7E-13 130.7 12.5 57 284-348 160-216 (830)
74 2rgh_A Alpha-glycerophosphate 98.7 2.6E-08 9E-13 123.6 12.6 60 285-348 198-259 (571)
75 3ka7_A Oxidoreductase; structu 98.7 4.5E-08 1.5E-12 117.4 13.9 59 902-971 200-258 (425)
76 3nlc_A Uncharacterized protein 98.7 5.9E-08 2E-12 118.5 14.1 55 902-966 224-278 (549)
77 1jnr_A Adenylylsulfate reducta 98.7 5.7E-08 1.9E-12 122.2 14.2 50 289-339 166-219 (643)
78 2gf3_A MSOX, monomeric sarcosi 98.7 1E-07 3.5E-12 112.8 15.4 34 79-113 3-36 (389)
79 1rp0_A ARA6, thiazole biosynth 98.7 5.6E-08 1.9E-12 109.6 11.5 36 701-736 38-73 (284)
80 3oz2_A Digeranylgeranylglycero 98.7 5.3E-08 1.8E-12 115.3 11.5 60 899-967 103-163 (397)
81 3axb_A Putative oxidoreductase 98.6 2E-08 7E-13 121.4 7.1 34 78-112 22-56 (448)
82 3cgv_A Geranylgeranyl reductas 98.6 7.2E-08 2.5E-12 114.4 10.6 59 899-965 103-162 (397)
83 3ps9_A TRNA 5-methylaminomethy 98.6 9.1E-08 3.1E-12 121.7 11.7 35 78-113 271-305 (676)
84 2i0z_A NAD(FAD)-utilizing dehy 98.6 2E-08 7E-13 121.1 5.2 52 283-340 142-193 (447)
85 3p1w_A Rabgdi protein; GDI RAB 98.6 4.9E-08 1.7E-12 116.6 7.3 52 903-964 261-313 (475)
86 3jsk_A Cypbp37 protein; octame 98.6 1.7E-07 5.8E-12 106.6 11.2 35 702-736 79-114 (344)
87 3pvc_A TRNA 5-methylaminomethy 98.5 1E-07 3.4E-12 121.5 9.7 35 78-113 263-297 (689)
88 3nrn_A Uncharacterized protein 98.5 3.6E-07 1.2E-11 109.4 13.4 57 902-971 193-249 (421)
89 2uzz_A N-methyl-L-tryptophan o 98.5 5.7E-07 2E-11 105.6 14.9 34 79-113 2-35 (372)
90 1ryi_A Glycine oxidase; flavop 98.5 2.3E-08 7.7E-13 118.2 2.7 36 77-113 15-50 (382)
91 3v76_A Flavoprotein; structura 98.5 3.6E-08 1.2E-12 117.1 4.5 37 77-114 25-61 (417)
92 1rp0_A ARA6, thiazole biosynth 98.5 1.6E-07 5.5E-12 105.8 9.5 36 78-113 38-73 (284)
93 3ces_A MNMG, tRNA uridine 5-ca 98.5 1.4E-07 4.9E-12 115.7 9.5 54 902-966 128-182 (651)
94 3cgv_A Geranylgeranyl reductas 98.5 3.7E-07 1.3E-11 108.2 12.8 64 280-348 107-170 (397)
95 3oz2_A Digeranylgeranylglycero 98.5 2.3E-07 7.9E-12 109.8 10.9 57 280-340 107-163 (397)
96 2e5v_A L-aspartate oxidase; ar 98.5 2.8E-07 9.6E-12 111.6 11.6 48 285-338 129-176 (472)
97 2zxi_A TRNA uridine 5-carboxym 98.5 1.4E-07 4.8E-12 115.4 8.6 57 901-968 126-183 (637)
98 2qcu_A Aerobic glycerol-3-phos 98.5 4.6E-07 1.6E-11 110.9 12.7 56 284-344 158-215 (501)
99 2bcg_G Secretory pathway GDP d 98.5 2.2E-07 7.5E-12 112.2 9.3 42 698-740 7-48 (453)
100 3i3l_A Alkylhalidase CMLS; fla 98.5 6.7E-07 2.3E-11 110.9 13.7 59 899-965 129-188 (591)
101 3atr_A Conserved archaeal prot 98.5 4.2E-07 1.4E-11 109.8 11.5 59 900-966 102-163 (453)
102 2gjc_A Thiazole biosynthetic e 98.5 4.8E-07 1.7E-11 102.3 11.1 35 701-736 64-100 (326)
103 4a9w_A Monooxygenase; baeyer-v 98.4 4E-07 1.4E-11 106.0 10.5 60 900-970 78-137 (357)
104 3c4n_A Uncharacterized protein 98.4 1.5E-07 5.1E-12 112.1 6.4 34 702-736 36-71 (405)
105 3nlc_A Uncharacterized protein 98.4 3.3E-07 1.1E-11 111.9 9.4 35 78-113 106-140 (549)
106 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 3.7E-07 1.3E-11 105.9 9.4 33 703-736 2-37 (342)
107 2cul_A Glucose-inhibited divis 98.4 4.8E-07 1.6E-11 98.7 9.7 54 901-965 71-125 (232)
108 3jsk_A Cypbp37 protein; octame 98.4 1.7E-06 5.8E-11 98.4 14.2 36 78-113 78-114 (344)
109 2gmh_A Electron transfer flavo 98.4 5.6E-07 1.9E-11 111.9 11.0 61 899-966 145-218 (584)
110 3cp8_A TRNA uridine 5-carboxym 98.4 5.1E-07 1.7E-11 110.9 10.0 55 902-967 121-176 (641)
111 1yvv_A Amine oxidase, flavin-c 98.4 6.1E-07 2.1E-11 103.7 10.1 34 702-736 2-35 (336)
112 3e1t_A Halogenase; flavoprotei 98.4 8.5E-07 2.9E-11 108.9 11.3 59 899-965 112-172 (512)
113 3nix_A Flavoprotein/dehydrogen 98.4 1.1E-06 3.8E-11 105.1 12.0 59 900-965 108-166 (421)
114 3k7m_X 6-hydroxy-L-nicotine ox 98.3 4.3E-07 1.5E-11 109.1 7.9 33 703-736 2-34 (431)
115 2gqf_A Hypothetical protein HI 98.3 5.6E-07 1.9E-11 106.5 7.8 35 78-113 3-37 (401)
116 3ka7_A Oxidoreductase; structu 98.3 1.5E-06 5.1E-11 104.1 11.2 54 284-344 205-258 (425)
117 2gjc_A Thiazole biosynthetic e 98.3 1.2E-06 4.2E-11 99.0 9.2 35 78-113 64-100 (326)
118 3atr_A Conserved archaeal prot 98.3 2.2E-06 7.6E-11 103.5 11.8 54 281-337 106-161 (453)
119 4fk1_A Putative thioredoxin re 98.3 2E-06 6.9E-11 97.9 10.8 37 699-736 3-39 (304)
120 3ihg_A RDME; flavoenzyme, anth 98.3 8.6E-06 2.9E-10 100.6 17.0 35 701-736 4-38 (535)
121 2x3n_A Probable FAD-dependent 98.2 1.3E-06 4.3E-11 103.8 8.8 61 900-970 109-171 (399)
122 3rp8_A Flavoprotein monooxygen 98.2 1.6E-06 5.6E-11 103.1 8.9 36 700-736 21-56 (407)
123 3nks_A Protoporphyrinogen oxid 98.2 2E-06 6.9E-11 104.6 9.9 57 903-970 239-295 (477)
124 3ces_A MNMG, tRNA uridine 5-ca 98.2 1.6E-06 5.4E-11 106.6 8.5 35 78-113 27-61 (651)
125 2zxi_A TRNA uridine 5-carboxym 98.2 1.6E-06 5.3E-11 106.2 8.0 35 78-113 26-60 (637)
126 3lov_A Protoporphyrinogen oxid 98.2 5.5E-06 1.9E-10 100.7 12.9 37 701-738 3-41 (475)
127 4ap3_A Steroid monooxygenase; 98.2 3.7E-06 1.3E-10 103.5 11.1 63 899-970 100-164 (549)
128 2qa1_A PGAE, polyketide oxygen 98.2 5.7E-06 1.9E-10 100.9 12.5 38 698-736 7-44 (500)
129 3i3l_A Alkylhalidase CMLS; fla 98.2 5.4E-06 1.8E-10 102.8 12.3 54 280-336 133-186 (591)
130 1d5t_A Guanine nucleotide diss 98.2 2.1E-06 7.1E-11 102.9 8.2 41 698-739 2-42 (433)
131 3e1t_A Halogenase; flavoprotei 98.2 4.3E-06 1.5E-10 102.5 11.0 55 280-337 116-171 (512)
132 2gmh_A Electron transfer flavo 98.2 2.5E-06 8.5E-11 106.1 8.9 58 280-339 149-218 (584)
133 3uox_A Otemo; baeyer-villiger 98.1 5.4E-06 1.8E-10 102.0 11.2 65 900-973 89-155 (545)
134 3alj_A 2-methyl-3-hydroxypyrid 98.1 6E-06 2E-10 97.2 11.1 35 701-736 10-44 (379)
135 3ab1_A Ferredoxin--NADP reduct 98.1 8.7E-06 3E-10 95.0 11.8 37 699-736 11-47 (360)
136 2qa2_A CABE, polyketide oxygen 98.1 8.4E-06 2.9E-10 99.4 11.9 36 700-736 10-45 (499)
137 3i6d_A Protoporphyrinogen oxid 98.1 1.9E-05 6.5E-10 95.7 14.9 48 913-971 248-295 (470)
138 3nix_A Flavoprotein/dehydrogen 98.1 3.7E-06 1.3E-10 100.5 8.4 35 78-113 4-38 (421)
139 1k0i_A P-hydroxybenzoate hydro 98.1 1.1E-06 3.9E-11 104.0 3.8 34 702-736 2-35 (394)
140 1s3e_A Amine oxidase [flavin-c 98.1 4.6E-06 1.6E-10 102.7 9.4 37 701-738 3-39 (520)
141 3ihg_A RDME; flavoenzyme, anth 98.1 2.2E-05 7.6E-10 96.9 15.5 35 78-113 4-38 (535)
142 2vou_A 2,6-dihydroxypyridine h 98.1 1.3E-05 4.4E-10 95.0 12.9 35 701-736 4-38 (397)
143 3fmw_A Oxygenase; mithramycin, 98.1 3.3E-06 1.1E-10 104.5 7.9 35 701-736 48-82 (570)
144 3c4n_A Uncharacterized protein 98.1 5.9E-07 2E-11 106.8 1.1 35 78-113 35-71 (405)
145 3lzw_A Ferredoxin--NADP reduct 98.1 1E-05 3.6E-10 92.9 11.5 34 702-736 7-40 (332)
146 3f8d_A Thioredoxin reductase ( 98.1 1.1E-05 3.8E-10 92.2 11.5 33 702-735 15-47 (323)
147 3nrn_A Uncharacterized protein 98.1 6.2E-06 2.1E-10 98.6 9.3 34 81-115 2-35 (421)
148 2ivd_A PPO, PPOX, protoporphyr 98.1 1.7E-05 5.8E-10 96.5 13.3 37 701-738 15-51 (478)
149 3cp8_A TRNA uridine 5-carboxym 98.1 4.3E-06 1.5E-10 102.7 7.9 35 78-113 20-54 (641)
150 3o0h_A Glutathione reductase; 98.0 6.6E-06 2.3E-10 100.2 9.3 52 902-964 236-287 (484)
151 3gwf_A Cyclohexanone monooxyge 98.0 4.2E-06 1.4E-10 102.8 7.6 62 900-970 89-152 (540)
152 2bry_A NEDD9 interacting prote 98.0 3.2E-06 1.1E-10 103.1 6.3 35 701-736 91-125 (497)
153 1w4x_A Phenylacetone monooxyge 98.0 9.2E-06 3.2E-10 100.3 10.2 35 701-736 15-49 (542)
154 2q7v_A Thioredoxin reductase; 98.0 1.2E-05 4.1E-10 92.3 10.4 34 701-735 7-40 (325)
155 3itj_A Thioredoxin reductase 1 98.0 8.1E-06 2.8E-10 94.2 8.7 36 700-736 20-55 (338)
156 3cty_A Thioredoxin reductase; 98.0 1.8E-05 6.1E-10 90.6 11.5 37 698-735 12-48 (319)
157 1yvv_A Amine oxidase, flavin-c 98.0 4.6E-06 1.6E-10 96.2 6.5 34 79-113 2-35 (336)
158 1fl2_A Alkyl hydroperoxide red 98.0 2E-05 6.9E-10 89.7 11.7 33 702-735 1-33 (310)
159 2zbw_A Thioredoxin reductase; 98.0 2.3E-05 7.9E-10 90.3 11.7 35 701-736 4-38 (335)
160 2q0l_A TRXR, thioredoxin reduc 98.0 2.4E-05 8.1E-10 89.1 11.5 32 703-735 2-34 (311)
161 2xdo_A TETX2 protein; tetracyc 98.0 2.9E-05 9.9E-10 92.0 12.4 36 700-736 24-59 (398)
162 2qa1_A PGAE, polyketide oxygen 97.9 2.5E-05 8.4E-10 95.3 11.8 37 76-113 8-44 (500)
163 2r0c_A REBC; flavin adenine di 97.9 3.7E-05 1.3E-09 95.0 13.4 35 701-736 25-59 (549)
164 3c96_A Flavin-containing monoo 97.9 1.8E-05 6.2E-10 94.1 10.3 36 700-736 2-38 (410)
165 4gut_A Lysine-specific histone 97.9 4.1E-05 1.4E-09 97.5 13.5 36 701-737 335-370 (776)
166 3fmw_A Oxygenase; mithramycin, 97.9 2.6E-05 9E-10 96.4 11.5 35 78-113 48-82 (570)
167 2gv8_A Monooxygenase; FMO, FAD 97.9 3E-05 1E-09 93.4 11.5 35 701-736 5-41 (447)
168 3d1c_A Flavin-containing putat 97.9 1.9E-05 6.6E-10 92.3 9.5 35 701-736 3-38 (369)
169 3kkj_A Amine oxidase, flavin-c 97.9 5.8E-06 2E-10 92.0 4.8 34 702-736 2-35 (336)
170 2aqj_A Tryptophan halogenase, 97.9 1.5E-05 5E-10 98.5 8.2 56 899-964 166-221 (538)
171 3qj4_A Renalase; FAD/NAD(P)-bi 97.9 1E-05 3.5E-10 93.7 6.0 34 80-113 2-37 (342)
172 3l8k_A Dihydrolipoyl dehydroge 97.8 3.2E-05 1.1E-09 93.6 10.1 35 701-736 3-37 (466)
173 2bry_A NEDD9 interacting prote 97.8 9.2E-06 3.2E-10 99.0 5.3 35 78-113 91-125 (497)
174 4a9w_A Monooxygenase; baeyer-v 97.8 2.2E-05 7.5E-10 91.2 8.2 34 79-113 3-36 (357)
175 3kkj_A Amine oxidase, flavin-c 97.8 8.8E-06 3E-10 90.5 4.4 35 79-114 2-36 (336)
176 2qa2_A CABE, polyketide oxygen 97.8 6E-05 2E-09 91.8 11.4 35 78-113 11-45 (499)
177 2xve_A Flavin-containing monoo 97.8 7E-05 2.4E-09 90.4 12.0 69 898-973 101-174 (464)
178 2dkh_A 3-hydroxybenzoate hydro 97.8 3.1E-05 1.1E-09 97.4 9.1 36 700-736 30-66 (639)
179 3s5w_A L-ornithine 5-monooxyge 97.8 6.7E-05 2.3E-09 90.8 11.8 35 701-736 29-68 (463)
180 3lxd_A FAD-dependent pyridine 97.8 0.00012 4E-09 87.2 13.7 61 900-970 196-256 (415)
181 2ywl_A Thioredoxin reductase r 97.8 7.4E-05 2.5E-09 77.5 10.4 33 703-736 2-34 (180)
182 2e4g_A Tryptophan halogenase; 97.8 4.2E-05 1.4E-09 94.5 9.9 55 900-964 196-251 (550)
183 3r9u_A Thioredoxin reductase; 97.8 8.4E-05 2.9E-09 84.5 11.6 54 903-964 188-243 (315)
184 3itj_A Thioredoxin reductase 1 97.8 1.6E-05 5.5E-10 91.6 5.6 56 285-343 219-276 (338)
185 2pyx_A Tryptophan halogenase; 97.8 6.5E-05 2.2E-09 92.4 11.1 55 900-964 177-232 (526)
186 1k0i_A P-hydroxybenzoate hydro 97.7 7.9E-06 2.7E-10 96.7 2.6 34 79-113 2-35 (394)
187 2x3n_A Probable FAD-dependent 97.7 2.4E-05 8.1E-10 92.7 6.7 35 78-113 5-39 (399)
188 1v59_A Dihydrolipoamide dehydr 97.7 1.6E-05 5.4E-10 96.7 4.7 35 701-736 4-38 (478)
189 3lov_A Protoporphyrinogen oxid 97.7 7.5E-05 2.6E-09 90.6 10.8 36 79-115 4-41 (475)
190 1trb_A Thioredoxin reductase; 97.7 7.2E-05 2.5E-09 85.5 9.7 34 701-735 4-37 (320)
191 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.0001 3.5E-09 90.3 11.5 34 701-735 211-244 (521)
192 1ojt_A Surface protein; redox- 97.7 8.3E-05 2.8E-09 90.4 10.4 37 699-736 3-39 (482)
193 2a87_A TRXR, TR, thioredoxin r 97.7 8E-05 2.7E-09 85.8 9.7 36 699-735 11-46 (335)
194 2r0c_A REBC; flavin adenine di 97.7 0.00016 5.6E-09 89.2 12.9 35 78-113 25-59 (549)
195 3fbs_A Oxidoreductase; structu 97.7 0.00015 5.1E-09 81.6 11.6 34 702-736 2-35 (297)
196 4gcm_A TRXR, thioredoxin reduc 97.7 2E-05 6.9E-10 89.9 4.3 34 702-736 6-39 (312)
197 4a5l_A Thioredoxin reductase; 97.6 2.1E-05 7.3E-10 89.6 4.2 37 699-736 1-37 (314)
198 3fpz_A Thiazole biosynthetic e 97.6 2.6E-05 8.9E-10 89.6 4.9 36 701-736 64-100 (326)
199 3f8d_A Thioredoxin reductase ( 97.6 0.0001 3.6E-09 84.0 9.8 65 280-348 195-261 (323)
200 1vdc_A NTR, NADPH dependent th 97.6 8.1E-05 2.8E-09 85.6 8.5 33 701-734 7-39 (333)
201 3fg2_P Putative rubredoxin red 97.6 9.8E-05 3.3E-09 87.5 9.3 61 900-970 186-246 (404)
202 2dkh_A 3-hydroxybenzoate hydro 97.6 0.00023 7.7E-09 89.5 13.1 37 77-113 30-66 (639)
203 4gde_A UDP-galactopyranose mut 97.6 2.8E-05 9.7E-10 95.4 3.8 39 702-740 10-48 (513)
204 1c0p_A D-amino acid oxidase; a 97.5 4.9E-05 1.7E-09 88.7 5.4 36 700-736 4-39 (363)
205 3lxd_A FAD-dependent pyridine 97.5 0.00026 9E-09 84.1 11.8 64 280-349 199-262 (415)
206 3s5w_A L-ornithine 5-monooxyge 97.5 0.00018 6E-09 87.0 10.4 36 78-114 29-69 (463)
207 4gcm_A TRXR, thioredoxin reduc 97.5 3.3E-05 1.1E-09 88.0 3.8 34 79-113 6-39 (312)
208 3fpz_A Thiazole biosynthetic e 97.5 4E-05 1.4E-09 88.0 4.3 37 78-114 64-101 (326)
209 4fk1_A Putative thioredoxin re 97.5 3.8E-05 1.3E-09 87.2 3.6 35 78-113 5-39 (304)
210 4a5l_A Thioredoxin reductase; 97.5 4.1E-05 1.4E-09 87.2 3.6 36 77-113 2-37 (314)
211 4hb9_A Similarities with proba 97.5 0.0003 1E-08 83.3 11.1 32 704-736 3-34 (412)
212 2bcg_G Secretory pathway GDP d 97.5 6.5E-05 2.2E-09 90.4 5.1 41 76-117 8-48 (453)
213 3uox_A Otemo; baeyer-villiger 97.5 0.00012 4E-09 90.1 7.3 35 78-113 8-42 (545)
214 3gwf_A Cyclohexanone monooxyge 97.4 0.00016 5.4E-09 88.8 7.6 35 78-113 7-42 (540)
215 1v0j_A UDP-galactopyranose mut 97.4 8.6E-05 3E-09 87.7 4.9 39 699-738 4-43 (399)
216 4b63_A L-ornithine N5 monooxyg 97.4 0.00063 2.2E-08 82.8 12.5 62 899-963 146-212 (501)
217 1c0p_A D-amino acid oxidase; a 97.3 0.00011 3.6E-09 85.8 4.9 36 77-113 4-39 (363)
218 4gde_A UDP-galactopyranose mut 97.3 6.7E-05 2.3E-09 92.0 3.3 40 78-117 9-48 (513)
219 3rp8_A Flavoprotein monooxygen 97.3 0.00012 4.1E-09 86.9 4.7 36 77-113 21-56 (407)
220 1y56_A Hypothetical protein PH 97.3 0.00052 1.8E-08 83.5 10.3 34 701-736 107-140 (493)
221 3iwa_A FAD-dependent pyridine 97.3 0.0004 1.4E-08 84.0 9.1 35 702-736 3-38 (472)
222 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00013 4.4E-09 87.1 4.4 42 75-117 16-57 (475)
223 3fg2_P Putative rubredoxin red 97.3 0.0013 4.6E-08 77.7 13.2 63 281-349 190-252 (404)
224 3g3e_A D-amino-acid oxidase; F 97.3 0.00012 4.1E-09 84.9 4.0 32 704-736 2-39 (351)
225 2xve_A Flavin-containing monoo 97.2 0.00046 1.6E-08 83.2 8.8 62 280-343 106-171 (464)
226 1i8t_A UDP-galactopyranose mut 97.2 0.00018 6E-09 84.0 4.8 35 702-737 1-35 (367)
227 3k7m_X 6-hydroxy-L-nicotine ox 97.2 0.00014 4.8E-09 87.0 4.0 34 80-114 2-35 (431)
228 3urh_A Dihydrolipoyl dehydroge 97.2 0.00015 5.1E-09 88.3 4.2 36 700-736 23-58 (491)
229 3ics_A Coenzyme A-disulfide re 97.2 0.00058 2E-08 85.1 9.4 36 701-736 35-71 (588)
230 4b1b_A TRXR, thioredoxin reduc 97.2 0.0002 6.8E-09 87.5 4.9 35 701-736 41-75 (542)
231 3oc4_A Oxidoreductase, pyridin 97.2 0.00089 3E-08 80.5 10.4 34 703-736 3-37 (452)
232 3hdq_A UDP-galactopyranose mut 97.1 0.00026 8.9E-09 82.8 5.1 37 701-738 28-64 (397)
233 1v0j_A UDP-galactopyranose mut 97.1 0.0002 6.8E-09 84.6 4.1 39 76-115 4-43 (399)
234 2jae_A L-amino acid oxidase; o 97.1 0.00033 1.1E-08 85.2 6.2 39 700-739 9-47 (489)
235 2cul_A Glucose-inhibited divis 97.1 0.00024 8.2E-09 77.1 4.0 34 79-113 3-36 (232)
236 3lad_A Dihydrolipoamide dehydr 97.1 0.00023 7.9E-09 86.3 3.8 35 701-736 2-36 (476)
237 2e1m_A L-glutamate oxidase; L- 97.1 0.00044 1.5E-08 80.1 6.0 37 701-738 43-80 (376)
238 2b9w_A Putative aminooxidase; 97.1 0.00038 1.3E-08 83.0 5.6 38 701-739 5-43 (424)
239 1sez_A Protoporphyrinogen oxid 97.0 0.00043 1.5E-08 84.6 5.8 40 699-739 10-49 (504)
240 1rsg_A FMS1 protein; FAD bindi 97.0 0.00026 9E-09 86.7 3.9 38 701-739 7-45 (516)
241 3hdq_A UDP-galactopyranose mut 97.0 0.00036 1.2E-08 81.6 4.5 37 78-115 28-64 (397)
242 1i8t_A UDP-galactopyranose mut 97.0 0.00033 1.1E-08 81.6 4.2 36 79-115 1-36 (367)
243 3g3e_A D-amino-acid oxidase; F 97.0 0.00027 9.2E-09 81.9 3.4 32 81-113 2-39 (351)
244 2xdo_A TETX2 protein; tetracyc 97.0 0.00048 1.7E-08 81.3 5.4 35 78-113 25-59 (398)
245 4dna_A Probable glutathione re 97.0 0.00037 1.3E-08 84.1 4.4 33 702-735 5-37 (463)
246 1d5t_A Guanine nucleotide diss 96.9 0.00051 1.7E-08 82.0 5.2 41 76-117 3-43 (433)
247 2jae_A L-amino acid oxidase; o 96.9 0.00064 2.2E-08 82.7 6.2 39 77-116 9-47 (489)
248 2vvm_A Monoamine oxidase N; FA 96.9 0.00057 1.9E-08 83.3 5.7 36 702-738 39-74 (495)
249 3ntd_A FAD-dependent pyridine 96.9 0.0014 4.7E-08 81.3 9.2 34 703-736 2-36 (565)
250 3dgh_A TRXR-1, thioredoxin red 96.9 0.00047 1.6E-08 83.7 4.7 35 701-736 8-42 (483)
251 3dk9_A Grase, GR, glutathione 96.9 0.00036 1.2E-08 84.7 3.6 36 700-736 18-53 (478)
252 2yg5_A Putrescine oxidase; oxi 96.9 0.00048 1.6E-08 82.9 4.7 37 701-738 4-40 (453)
253 1s3e_A Amine oxidase [flavin-c 96.9 0.00043 1.5E-08 84.9 4.3 37 78-115 3-39 (520)
254 3lad_A Dihydrolipoamide dehydr 96.9 0.00035 1.2E-08 84.7 3.4 35 78-113 2-36 (476)
255 3ihm_A Styrene monooxygenase A 96.9 0.00044 1.5E-08 82.5 4.2 34 702-736 22-55 (430)
256 2r9z_A Glutathione amide reduc 96.9 0.00047 1.6E-08 83.2 4.4 35 701-736 3-37 (463)
257 4b1b_A TRXR, thioredoxin reduc 96.9 0.00048 1.6E-08 84.1 4.5 35 78-113 41-75 (542)
258 3qfa_A Thioredoxin reductase 1 96.9 0.00052 1.8E-08 84.0 4.8 36 700-736 30-65 (519)
259 3cty_A Thioredoxin reductase; 96.9 0.00041 1.4E-08 79.2 3.6 36 76-112 13-48 (319)
260 3c96_A Flavin-containing monoo 96.9 0.00039 1.3E-08 82.5 3.6 35 78-113 3-38 (410)
261 1ges_A Glutathione reductase; 96.9 0.00046 1.6E-08 82.9 4.2 35 701-736 3-37 (450)
262 3alj_A 2-methyl-3-hydroxypyrid 96.9 0.00057 1.9E-08 80.1 4.9 34 79-113 11-44 (379)
263 1zk7_A HGII, reductase, mercur 96.9 0.00062 2.1E-08 82.2 5.2 36 700-736 2-37 (467)
264 3o0h_A Glutathione reductase; 96.9 0.00045 1.5E-08 83.9 3.9 34 78-112 25-58 (484)
265 3g5s_A Methylenetetrahydrofola 96.9 0.00063 2.1E-08 77.6 4.6 34 703-737 2-35 (443)
266 3klj_A NAD(FAD)-dependent dehy 96.8 0.0032 1.1E-07 73.7 10.9 35 701-736 8-42 (385)
267 2bi7_A UDP-galactopyranose mut 96.8 0.00071 2.4E-08 79.3 5.3 37 701-738 2-38 (384)
268 3ic9_A Dihydrolipoamide dehydr 96.8 0.00052 1.8E-08 83.5 4.2 34 702-736 8-41 (492)
269 3l8k_A Dihydrolipoyl dehydroge 96.8 0.00044 1.5E-08 83.5 3.4 35 78-113 3-37 (466)
270 1mo9_A ORF3; nucleotide bindin 96.8 0.0007 2.4E-08 83.0 5.2 37 699-736 40-76 (523)
271 2b9w_A Putative aminooxidase; 96.8 0.00073 2.5E-08 80.5 5.1 37 78-115 5-42 (424)
272 2hqm_A GR, grase, glutathione 96.8 0.00056 1.9E-08 82.9 4.1 35 701-736 10-44 (479)
273 3urh_A Dihydrolipoyl dehydroge 96.8 0.00054 1.8E-08 83.4 3.9 35 78-113 24-58 (491)
274 3dgz_A Thioredoxin reductase 2 96.8 0.0006 2.1E-08 82.9 4.3 35 701-736 5-39 (488)
275 2ivd_A PPO, PPOX, protoporphyr 96.8 0.00068 2.3E-08 82.2 4.7 37 78-115 15-51 (478)
276 2vou_A 2,6-dihydroxypyridine h 96.8 0.00074 2.5E-08 79.7 4.9 35 78-113 4-38 (397)
277 2e1m_A L-glutamate oxidase; L- 96.8 0.00081 2.8E-08 77.9 5.0 36 78-114 43-79 (376)
278 3nks_A Protoporphyrinogen oxid 96.8 0.00079 2.7E-08 81.6 5.2 35 80-115 3-39 (477)
279 4dna_A Probable glutathione re 96.8 0.00064 2.2E-08 82.0 4.2 34 78-112 4-37 (463)
280 1sez_A Protoporphyrinogen oxid 96.8 0.00094 3.2E-08 81.6 5.6 40 76-116 10-49 (504)
281 3ic9_A Dihydrolipoamide dehydr 96.7 0.00067 2.3E-08 82.5 4.1 34 79-113 8-41 (492)
282 3ab1_A Ferredoxin--NADP reduct 96.7 0.00071 2.4E-08 78.6 4.1 36 77-113 12-47 (360)
283 3dgh_A TRXR-1, thioredoxin red 96.7 0.0007 2.4E-08 82.2 4.1 35 78-113 8-42 (483)
284 3i6d_A Protoporphyrinogen oxid 96.7 0.00051 1.7E-08 83.0 2.8 36 79-115 5-46 (470)
285 2a8x_A Dihydrolipoyl dehydroge 96.7 0.00069 2.4E-08 81.8 3.9 34 702-736 3-36 (464)
286 2ywl_A Thioredoxin reductase r 96.7 0.00076 2.6E-08 69.7 3.6 33 80-113 2-34 (180)
287 3c4a_A Probable tryptophan hyd 96.7 0.00082 2.8E-08 78.8 4.3 32 704-736 2-35 (381)
288 3ihm_A Styrene monooxygenase A 96.7 0.0007 2.4E-08 80.8 3.8 34 79-113 22-55 (430)
289 1rsg_A FMS1 protein; FAD bindi 96.7 0.00063 2.1E-08 83.4 3.4 38 78-116 7-45 (516)
290 1ges_A Glutathione reductase; 96.7 0.00075 2.6E-08 81.1 4.1 35 78-113 3-37 (450)
291 4b63_A L-ornithine N5 monooxyg 96.7 0.0033 1.1E-07 76.5 9.6 57 278-335 148-211 (501)
292 2r9z_A Glutathione amide reduc 96.7 0.00076 2.6E-08 81.3 3.9 35 78-113 3-37 (463)
293 2weu_A Tryptophan 5-halogenase 96.7 0.00065 2.2E-08 83.2 3.3 55 900-964 175-229 (511)
294 2yg5_A Putrescine oxidase; oxi 96.7 0.00082 2.8E-08 80.8 4.1 37 78-115 4-40 (453)
295 2qae_A Lipoamide, dihydrolipoy 96.7 0.0009 3.1E-08 80.9 4.4 34 702-736 2-35 (468)
296 3dgz_A Thioredoxin reductase 2 96.6 0.00076 2.6E-08 82.0 3.7 35 78-113 5-39 (488)
297 2q7v_A Thioredoxin reductase; 96.6 0.00081 2.8E-08 76.9 3.7 34 78-112 7-40 (325)
298 3fbs_A Oxidoreductase; structu 96.6 0.00083 2.8E-08 75.4 3.7 34 79-113 2-35 (297)
299 3g5s_A Methylenetetrahydrofola 96.6 0.00095 3.3E-08 76.1 4.1 34 80-114 2-35 (443)
300 2vvm_A Monoamine oxidase N; FA 96.6 0.00085 2.9E-08 81.7 3.9 37 78-115 38-74 (495)
301 3qfa_A Thioredoxin reductase 1 96.6 0.00096 3.3E-08 81.6 4.3 36 77-113 30-65 (519)
302 2zbw_A Thioredoxin reductase; 96.6 0.00087 3E-08 76.9 3.7 35 78-113 4-38 (335)
303 1onf_A GR, grase, glutathione 96.6 0.001 3.5E-08 81.0 4.5 34 702-736 2-35 (500)
304 2yqu_A 2-oxoglutarate dehydrog 96.6 0.00098 3.3E-08 80.2 4.2 34 702-736 1-34 (455)
305 1zk7_A HGII, reductase, mercur 96.6 0.0011 3.8E-08 80.0 4.7 35 78-113 3-37 (467)
306 1mo9_A ORF3; nucleotide bindin 96.6 0.0012 4.1E-08 80.9 4.9 38 75-113 39-76 (523)
307 1vg0_A RAB proteins geranylger 96.6 0.0016 5.4E-08 80.2 5.6 40 699-739 5-44 (650)
308 3lzw_A Ferredoxin--NADP reduct 96.6 0.001 3.5E-08 76.1 3.8 34 79-113 7-40 (332)
309 2iid_A L-amino-acid oxidase; f 96.6 0.0014 4.7E-08 80.0 5.1 37 701-738 32-68 (498)
310 1xdi_A RV3303C-LPDA; reductase 96.5 0.001 3.5E-08 81.1 3.7 34 702-736 2-38 (499)
311 3dk9_A Grase, GR, glutathione 96.5 0.001 3.6E-08 80.5 3.7 35 78-113 19-53 (478)
312 1fec_A Trypanothione reductase 96.5 0.0011 3.7E-08 80.5 3.9 33 701-734 2-35 (490)
313 1dxl_A Dihydrolipoamide dehydr 96.5 0.0011 3.9E-08 80.0 4.0 35 701-736 5-39 (470)
314 1zmd_A Dihydrolipoyl dehydroge 96.5 0.0011 3.7E-08 80.3 3.8 35 701-736 5-39 (474)
315 2bi7_A UDP-galactopyranose mut 96.5 0.0016 5.6E-08 76.2 5.2 36 79-115 3-38 (384)
316 4dsg_A UDP-galactopyranose mut 96.5 0.0013 4.6E-08 79.6 4.6 37 701-738 8-45 (484)
317 1ojt_A Surface protein; redox- 96.5 0.00098 3.4E-08 80.8 3.2 36 77-113 4-39 (482)
318 2eq6_A Pyruvate dehydrogenase 96.5 0.0012 4E-08 79.7 3.8 34 702-736 6-39 (464)
319 1fl2_A Alkyl hydroperoxide red 96.5 0.0014 4.8E-08 74.2 4.3 32 79-111 1-32 (310)
320 2hqm_A GR, grase, glutathione 96.5 0.0011 3.6E-08 80.5 3.4 35 78-113 10-44 (479)
321 3c4a_A Probable tryptophan hyd 96.5 0.0013 4.5E-08 77.0 4.1 33 81-114 2-36 (381)
322 1ebd_A E3BD, dihydrolipoamide 96.5 0.0013 4.3E-08 79.3 3.9 34 702-736 3-36 (455)
323 2qae_A Lipoamide, dihydrolipoy 96.5 0.0013 4.3E-08 79.6 3.9 34 79-113 2-35 (468)
324 2wpf_A Trypanothione reductase 96.5 0.001 3.4E-08 80.9 3.0 36 699-735 4-40 (495)
325 1v59_A Dihydrolipoamide dehydr 96.4 0.00086 2.9E-08 81.3 2.3 35 78-113 4-38 (478)
326 2q0l_A TRXR, thioredoxin reduc 96.4 0.0012 4.2E-08 74.8 3.5 32 80-112 2-34 (311)
327 1pn0_A Phenol 2-monooxygenase; 96.4 0.0014 4.8E-08 82.5 4.2 34 702-736 8-46 (665)
328 2yqu_A 2-oxoglutarate dehydrog 96.4 0.0013 4.4E-08 79.2 3.7 34 79-113 1-34 (455)
329 1onf_A GR, grase, glutathione 96.4 0.0014 4.7E-08 79.9 3.9 34 79-113 2-35 (500)
330 3k30_A Histamine dehydrogenase 96.4 0.002 6.9E-08 81.7 5.6 37 700-737 389-425 (690)
331 2gv8_A Monooxygenase; FMO, FAD 96.4 0.0022 7.6E-08 76.9 5.6 36 78-114 5-42 (447)
332 3d1c_A Flavin-containing putat 96.4 0.0014 4.9E-08 76.2 3.8 34 79-113 4-38 (369)
333 1lvl_A Dihydrolipoamide dehydr 96.4 0.0014 4.9E-08 78.8 3.8 34 701-735 4-37 (458)
334 1vg0_A RAB proteins geranylger 96.4 0.0022 7.5E-08 78.9 5.2 40 76-116 5-44 (650)
335 1w4x_A Phenylacetone monooxyge 96.3 0.0018 6.3E-08 79.6 4.5 36 78-114 15-50 (542)
336 2aqj_A Tryptophan halogenase, 96.3 0.0018 6.1E-08 79.7 4.3 36 78-113 4-41 (538)
337 1xdi_A RV3303C-LPDA; reductase 96.3 0.0014 4.8E-08 79.8 3.3 34 79-113 2-38 (499)
338 1trb_A Thioredoxin reductase; 96.3 0.0017 5.7E-08 73.9 3.7 34 78-112 4-37 (320)
339 1dxl_A Dihydrolipoamide dehydr 96.3 0.0016 5.3E-08 78.8 3.6 35 78-113 5-39 (470)
340 2a87_A TRXR, TR, thioredoxin r 96.3 0.0015 5.2E-08 75.0 3.2 35 77-112 12-46 (335)
341 2v3a_A Rubredoxin reductase; a 96.3 0.0024 8.2E-08 74.9 5.0 58 901-969 190-247 (384)
342 1ebd_A E3BD, dihydrolipoamide 96.3 0.0016 5.4E-08 78.4 3.4 34 78-112 2-35 (455)
343 2a8x_A Dihydrolipoyl dehydroge 96.3 0.0017 5.8E-08 78.3 3.5 33 79-112 3-35 (464)
344 1b37_A Protein (polyamine oxid 96.3 0.0022 7.5E-08 77.5 4.5 37 701-738 3-40 (472)
345 1zmd_A Dihydrolipoyl dehydroge 96.2 0.0018 6E-08 78.4 3.4 35 78-113 5-39 (474)
346 2weu_A Tryptophan 5-halogenase 96.2 0.0015 5.3E-08 79.8 2.9 35 79-113 2-38 (511)
347 4hb9_A Similarities with proba 96.2 0.0027 9.2E-08 75.0 4.9 32 81-113 3-34 (412)
348 3r9u_A Thioredoxin reductase; 96.2 0.0014 4.9E-08 74.2 2.4 34 78-112 3-37 (315)
349 2iid_A L-amino-acid oxidase; f 96.2 0.0022 7.6E-08 78.1 4.3 37 78-115 32-68 (498)
350 2vdc_G Glutamate synthase [NAD 96.2 0.0029 1E-07 75.7 5.2 36 701-737 121-156 (456)
351 1vdc_A NTR, NADPH dependent th 96.2 0.0016 5.5E-08 74.6 2.8 33 78-111 7-39 (333)
352 1q1r_A Putidaredoxin reductase 96.2 0.0033 1.1E-07 75.0 5.6 59 902-970 195-255 (431)
353 4dsg_A UDP-galactopyranose mut 96.2 0.0023 7.9E-08 77.5 4.2 37 78-115 8-45 (484)
354 2e4g_A Tryptophan halogenase; 96.2 0.0029 9.8E-08 78.0 5.0 37 78-114 24-62 (550)
355 2x8g_A Thioredoxin glutathione 96.2 0.0026 8.7E-08 79.4 4.5 34 701-735 106-139 (598)
356 1lvl_A Dihydrolipoamide dehydr 96.1 0.0021 7.3E-08 77.2 3.4 34 78-112 4-37 (458)
357 2eq6_A Pyruvate dehydrogenase 96.1 0.0023 7.7E-08 77.2 3.5 34 79-113 6-39 (464)
358 1m6i_A Programmed cell death p 96.1 0.0027 9.2E-08 77.1 4.1 40 698-737 7-47 (493)
359 2pyx_A Tryptophan halogenase; 96.1 0.0029 9.8E-08 77.6 4.5 36 78-113 6-52 (526)
360 1b37_A Protein (polyamine oxid 96.1 0.003 1E-07 76.4 4.1 37 78-115 3-40 (472)
361 3kd9_A Coenzyme A disulfide re 96.1 0.0034 1.2E-07 75.3 4.6 38 701-738 2-40 (449)
362 4ap3_A Steroid monooxygenase; 96.0 0.0027 9.4E-08 77.9 3.8 35 78-113 20-54 (549)
363 2cdu_A NADPH oxidase; flavoenz 96.0 0.003 1E-07 75.8 4.1 35 703-737 1-36 (452)
364 4gut_A Lysine-specific histone 96.0 0.0033 1.1E-07 80.0 4.5 37 78-115 335-371 (776)
365 3k30_A Histamine dehydrogenase 96.0 0.0041 1.4E-07 78.9 5.2 37 77-114 389-425 (690)
366 2v3a_A Rubredoxin reductase; a 96.0 0.0045 1.5E-07 72.6 4.9 35 78-113 3-39 (384)
367 2wpf_A Trypanothione reductase 95.9 0.0025 8.5E-08 77.4 2.8 36 76-112 4-40 (495)
368 1fec_A Trypanothione reductase 95.9 0.0029 1E-07 76.7 3.3 33 78-111 2-35 (490)
369 2x8g_A Thioredoxin glutathione 95.9 0.0034 1.2E-07 78.3 3.9 34 78-112 106-139 (598)
370 2z3y_A Lysine-specific histone 95.9 0.0058 2E-07 77.0 5.8 37 701-738 106-142 (662)
371 1pn0_A Phenol 2-monooxygenase; 95.9 0.0035 1.2E-07 78.9 3.6 35 79-113 8-46 (665)
372 2vdc_G Glutamate synthase [NAD 95.8 0.0039 1.3E-07 74.6 3.7 36 78-114 121-156 (456)
373 1q1r_A Putidaredoxin reductase 95.8 0.0054 1.9E-07 73.0 5.0 36 78-114 3-40 (431)
374 1o94_A Tmadh, trimethylamine d 95.8 0.0071 2.4E-07 77.0 6.2 36 701-737 388-423 (729)
375 1xhc_A NADH oxidase /nitrite r 95.8 0.0056 1.9E-07 71.2 4.8 33 702-736 8-40 (367)
376 2cdu_A NADPH oxidase; flavoenz 95.8 0.004 1.4E-07 74.8 3.6 34 80-113 1-35 (452)
377 1hyu_A AHPF, alkyl hydroperoxi 95.8 0.0043 1.5E-07 75.8 4.0 33 78-111 211-243 (521)
378 3h28_A Sulfide-quinone reducta 95.7 0.0066 2.2E-07 72.3 5.2 34 703-737 3-38 (430)
379 2xag_A Lysine-specific histone 95.7 0.0085 2.9E-07 76.8 6.4 37 701-738 277-313 (852)
380 2bc0_A NADH oxidase; flavoprot 95.7 0.0046 1.6E-07 75.1 3.7 34 702-736 35-71 (490)
381 1ps9_A 2,4-dienoyl-COA reducta 95.7 0.01 3.5E-07 74.9 7.1 37 701-738 372-408 (671)
382 1xhc_A NADH oxidase /nitrite r 95.6 0.0072 2.5E-07 70.3 4.9 33 79-113 8-40 (367)
383 3sx6_A Sulfide-quinone reducta 95.6 0.0066 2.3E-07 72.5 4.6 34 702-736 4-40 (437)
384 3cgb_A Pyridine nucleotide-dis 95.6 0.0063 2.2E-07 73.6 4.4 36 702-737 36-72 (480)
385 3h8l_A NADH oxidase; membrane 95.6 0.0061 2.1E-07 72.1 4.0 33 703-736 2-37 (409)
386 1nhp_A NADH peroxidase; oxidor 95.6 0.0061 2.1E-07 73.0 4.0 35 703-737 1-36 (447)
387 2gag_A Heterotetrameric sarcos 95.6 0.006 2.1E-07 80.1 4.2 36 701-737 127-162 (965)
388 1y56_A Hypothetical protein PH 95.5 0.0053 1.8E-07 74.5 3.2 34 78-113 107-140 (493)
389 3oc4_A Oxidoreductase, pyridin 95.5 0.007 2.4E-07 72.6 4.2 35 80-114 3-38 (452)
390 2bc0_A NADH oxidase; flavoprot 95.4 0.006 2E-07 74.0 3.2 34 79-113 35-71 (490)
391 1ps9_A 2,4-dienoyl-COA reducta 95.4 0.0098 3.4E-07 75.1 5.3 37 78-115 372-408 (671)
392 2z3y_A Lysine-specific histone 95.4 0.0091 3.1E-07 75.2 4.9 37 78-115 106-142 (662)
393 2gqw_A Ferredoxin reductase; f 95.4 0.008 2.7E-07 71.0 4.0 36 701-737 6-43 (408)
394 3kd9_A Coenzyme A disulfide re 95.3 0.0085 2.9E-07 71.8 4.1 35 79-113 3-38 (449)
395 1o94_A Tmadh, trimethylamine d 95.3 0.01 3.5E-07 75.6 4.9 36 78-114 388-423 (729)
396 1m6i_A Programmed cell death p 95.3 0.0086 2.9E-07 72.6 4.0 38 77-114 9-47 (493)
397 3iwa_A FAD-dependent pyridine 95.3 0.0077 2.6E-07 72.7 3.5 36 79-114 3-39 (472)
398 1nhp_A NADH peroxidase; oxidor 95.3 0.0078 2.7E-07 72.1 3.5 34 80-113 1-35 (447)
399 3cgb_A Pyridine nucleotide-dis 95.3 0.0084 2.9E-07 72.5 3.8 35 79-113 36-71 (480)
400 2gag_A Heterotetrameric sarcos 95.2 0.0084 2.9E-07 78.7 3.7 37 78-115 127-163 (965)
401 2xag_A Lysine-specific histone 95.1 0.014 4.8E-07 74.8 5.3 37 78-115 277-313 (852)
402 1cjc_A Protein (adrenodoxin re 95.0 0.014 4.7E-07 70.0 4.5 34 702-736 6-41 (460)
403 1lqt_A FPRA; NADP+ derivative, 94.9 0.01 3.5E-07 71.1 3.2 36 701-736 2-43 (456)
404 2gqw_A Ferredoxin reductase; f 94.9 0.012 4E-07 69.5 3.5 35 78-113 6-42 (408)
405 1gte_A Dihydropyrimidine dehyd 94.8 0.014 4.9E-07 77.0 4.4 36 701-737 186-222 (1025)
406 3h28_A Sulfide-quinone reducta 94.8 0.017 5.8E-07 68.7 4.6 34 80-113 3-37 (430)
407 3ics_A Coenzyme A-disulfide re 94.8 0.016 5.4E-07 72.1 4.3 38 78-115 35-73 (588)
408 3h8l_A NADH oxidase; membrane 94.6 0.015 5.1E-07 68.7 3.5 33 81-113 3-37 (409)
409 3ayj_A Pro-enzyme of L-phenyla 94.6 0.013 4.5E-07 73.0 3.1 36 702-738 56-100 (721)
410 3sx6_A Sulfide-quinone reducta 94.5 0.02 6.9E-07 68.2 4.3 35 79-113 4-40 (437)
411 3ef6_A Toluene 1,2-dioxygenase 94.5 0.02 6.8E-07 67.6 4.2 59 901-970 188-246 (410)
412 1cjc_A Protein (adrenodoxin re 94.5 0.018 6.3E-07 68.9 3.9 36 78-114 5-42 (460)
413 1gte_A Dihydropyrimidine dehyd 94.2 0.021 7.2E-07 75.5 3.9 36 78-114 186-222 (1025)
414 3ntd_A FAD-dependent pyridine 94.0 0.026 8.8E-07 69.8 4.0 36 80-115 2-38 (565)
415 3vrd_B FCCB subunit, flavocyto 93.9 0.041 1.4E-06 64.7 5.2 32 705-736 5-37 (401)
416 1lqt_A FPRA; NADP+ derivative, 93.8 0.024 8.3E-07 67.8 3.1 36 79-114 3-44 (456)
417 3ef6_A Toluene 1,2-dioxygenase 93.8 0.031 1.1E-06 65.9 3.9 62 281-349 191-252 (410)
418 3ayj_A Pro-enzyme of L-phenyla 93.8 0.022 7.5E-07 71.0 2.6 34 79-113 56-97 (721)
419 3vrd_B FCCB subunit, flavocyto 93.4 0.049 1.7E-06 64.0 4.7 32 82-113 5-37 (401)
420 4eqs_A Coenzyme A disulfide re 93.3 0.034 1.1E-06 66.2 3.2 32 705-737 3-36 (437)
421 3klj_A NAD(FAD)-dependent dehy 93.1 0.065 2.2E-06 62.5 5.0 36 78-114 8-43 (385)
422 4g6h_A Rotenone-insensitive NA 92.9 0.064 2.2E-06 64.9 4.8 35 702-737 42-76 (502)
423 4eqs_A Coenzyme A disulfide re 92.6 0.046 1.6E-06 65.0 2.9 31 82-113 3-35 (437)
424 3hyw_A Sulfide-quinone reducta 92.6 0.069 2.4E-06 63.4 4.3 34 704-737 4-38 (430)
425 4g6h_A Rotenone-insensitive NA 92.2 0.1 3.5E-06 63.1 5.2 35 78-113 41-75 (502)
426 3hyw_A Sulfide-quinone reducta 92.0 0.097 3.3E-06 62.1 4.6 33 81-113 4-37 (430)
427 2g1u_A Hypothetical protein TM 86.3 0.55 1.9E-05 46.6 4.5 33 703-736 20-52 (155)
428 3llv_A Exopolyphosphatase-rela 85.5 0.55 1.9E-05 45.7 4.0 32 704-736 8-39 (141)
429 1lss_A TRK system potassium up 85.4 0.68 2.3E-05 44.7 4.6 32 704-736 6-37 (140)
430 3fwz_A Inner membrane protein 85.4 0.59 2E-05 45.5 4.1 32 704-736 9-40 (140)
431 3fwz_A Inner membrane protein 84.8 0.53 1.8E-05 45.8 3.5 32 81-113 9-40 (140)
432 2g1u_A Hypothetical protein TM 84.5 0.67 2.3E-05 46.0 4.1 33 80-113 20-52 (155)
433 3llv_A Exopolyphosphatase-rela 84.4 0.57 2E-05 45.5 3.5 31 81-112 8-38 (141)
434 1lss_A TRK system potassium up 84.3 0.7 2.4E-05 44.6 4.1 31 81-112 6-36 (140)
435 3ic5_A Putative saccharopine d 82.4 0.99 3.4E-05 41.9 4.2 32 704-736 7-39 (118)
436 1id1_A Putative potassium chan 81.8 0.82 2.8E-05 45.2 3.5 31 81-112 5-35 (153)
437 1id1_A Putative potassium chan 80.6 1.3 4.6E-05 43.6 4.5 31 704-735 5-35 (153)
438 3ic5_A Putative saccharopine d 79.2 1.3 4.4E-05 41.1 3.7 32 81-113 7-39 (118)
439 3ado_A Lambda-crystallin; L-gu 79.0 1.3 4.5E-05 49.5 4.3 32 704-736 8-39 (319)
440 2hmt_A YUAA protein; RCK, KTN, 78.6 1.2 4.1E-05 43.1 3.4 32 704-736 8-39 (144)
441 3i83_A 2-dehydropantoate 2-red 77.2 1.9 6.5E-05 48.5 5.0 32 704-736 4-35 (320)
442 3c85_A Putative glutathione-re 76.9 1.3 4.5E-05 45.2 3.3 32 704-736 41-73 (183)
443 2hmt_A YUAA protein; RCK, KTN, 76.2 1.3 4.5E-05 42.7 2.9 31 81-112 8-38 (144)
444 3c85_A Putative glutathione-re 75.9 1.3 4.4E-05 45.2 2.8 32 81-113 41-73 (183)
445 1f0y_A HCDH, L-3-hydroxyacyl-C 75.5 2.2 7.7E-05 47.4 5.0 32 704-736 17-48 (302)
446 3hn2_A 2-dehydropantoate 2-red 74.5 2 6.7E-05 48.2 4.1 32 704-736 4-35 (312)
447 3ado_A Lambda-crystallin; L-gu 74.4 1.7 5.9E-05 48.5 3.6 32 81-113 8-39 (319)
448 3i83_A 2-dehydropantoate 2-red 74.4 2.1 7.3E-05 48.1 4.4 32 81-113 4-35 (320)
449 3l4b_C TRKA K+ channel protien 74.0 1.7 6E-05 45.7 3.4 31 705-736 3-33 (218)
450 1jw9_B Molybdopterin biosynthe 72.9 2.4 8.3E-05 45.7 4.2 34 702-736 31-65 (249)
451 3l4b_C TRKA K+ channel protien 72.9 1.7 5.9E-05 45.7 3.0 31 82-113 3-33 (218)
452 1ks9_A KPA reductase;, 2-dehyd 72.8 3 0.0001 45.8 5.1 31 705-736 3-33 (291)
453 2raf_A Putative dinucleotide-b 72.4 3.4 0.00012 43.2 5.1 33 703-736 20-52 (209)
454 3hn2_A 2-dehydropantoate 2-red 72.1 2.2 7.5E-05 47.8 3.8 32 81-113 4-35 (312)
455 2y0c_A BCEC, UDP-glucose dehyd 71.6 2.9 9.9E-05 49.8 4.9 34 702-736 8-41 (478)
456 4e12_A Diketoreductase; oxidor 71.3 3.8 0.00013 45.0 5.5 32 704-736 6-37 (283)
457 3ghy_A Ketopantoate reductase 71.0 2.7 9.1E-05 47.6 4.2 31 704-735 5-35 (335)
458 1f0y_A HCDH, L-3-hydroxyacyl-C 70.8 2.8 9.6E-05 46.6 4.3 31 82-113 18-48 (302)
459 1lld_A L-lactate dehydrogenase 70.6 3.4 0.00012 46.3 5.0 32 704-736 9-42 (319)
460 4e12_A Diketoreductase; oxidor 70.3 3 0.0001 45.9 4.3 32 81-113 6-37 (283)
461 1ks9_A KPA reductase;, 2-dehyd 69.7 3.5 0.00012 45.3 4.7 31 82-113 3-33 (291)
462 2raf_A Putative dinucleotide-b 69.5 3.8 0.00013 42.8 4.7 33 80-113 20-52 (209)
463 2ew2_A 2-dehydropantoate 2-red 68.9 3.8 0.00013 45.7 4.9 32 704-736 5-36 (316)
464 3ego_A Probable 2-dehydropanto 68.7 4.1 0.00014 45.4 5.1 31 704-736 4-34 (307)
465 4g65_A TRK system potassium up 68.3 3 0.0001 49.5 3.9 31 82-113 6-36 (461)
466 2dpo_A L-gulonate 3-dehydrogen 68.2 3.5 0.00012 46.2 4.3 32 704-736 8-39 (319)
467 3ghy_A Ketopantoate reductase 67.8 2.9 0.0001 47.3 3.6 31 81-112 5-35 (335)
468 3dfz_A SIRC, precorrin-2 dehyd 67.8 3.8 0.00013 43.2 4.2 33 702-735 31-63 (223)
469 3k6j_A Protein F01G10.3, confi 67.8 4.1 0.00014 48.0 4.9 32 704-736 56-87 (460)
470 3g17_A Similar to 2-dehydropan 67.3 2.3 7.9E-05 47.1 2.6 32 704-736 4-35 (294)
471 3hwr_A 2-dehydropantoate 2-red 67.2 4.1 0.00014 45.6 4.7 31 703-735 20-50 (318)
472 3gg2_A Sugar dehydrogenase, UD 67.0 4.3 0.00015 47.9 5.0 32 704-736 4-35 (450)
473 1zcj_A Peroxisomal bifunctiona 66.9 4.4 0.00015 48.1 5.0 32 704-736 39-70 (463)
474 3rui_A Ubiquitin-like modifier 66.6 4.8 0.00017 45.2 4.9 34 702-736 34-68 (340)
475 3g79_A NDP-N-acetyl-D-galactos 66.6 4.2 0.00014 48.2 4.7 32 704-736 20-53 (478)
476 1kyq_A Met8P, siroheme biosynt 66.5 3.1 0.00011 45.3 3.3 32 703-735 14-45 (274)
477 1bg6_A N-(1-D-carboxylethyl)-L 66.4 4.6 0.00016 46.0 5.0 33 703-736 5-37 (359)
478 4g65_A TRK system potassium up 66.3 3.2 0.00011 49.2 3.6 31 705-736 6-36 (461)
479 3vtf_A UDP-glucose 6-dehydroge 66.2 4.1 0.00014 47.6 4.4 34 702-736 21-54 (444)
480 1jw9_B Molybdopterin biosynthe 66.1 3.4 0.00012 44.5 3.6 34 79-113 31-65 (249)
481 2ew2_A 2-dehydropantoate 2-red 65.8 4.1 0.00014 45.4 4.3 31 81-112 5-35 (316)
482 1lld_A L-lactate dehydrogenase 65.7 4.3 0.00015 45.5 4.4 32 81-113 9-42 (319)
483 2y0c_A BCEC, UDP-glucose dehyd 65.7 3.9 0.00013 48.6 4.3 33 79-112 8-40 (478)
484 1nyt_A Shikimate 5-dehydrogena 65.2 5.2 0.00018 43.7 4.9 32 704-736 121-152 (271)
485 1mv8_A GMD, GDP-mannose 6-dehy 65.1 4.4 0.00015 47.7 4.5 31 705-736 3-33 (436)
486 3hwr_A 2-dehydropantoate 2-red 65.0 4.1 0.00014 45.6 4.1 31 80-112 20-50 (318)
487 3oj0_A Glutr, glutamyl-tRNA re 64.9 3 0.0001 40.5 2.6 32 704-736 23-54 (144)
488 3dfz_A SIRC, precorrin-2 dehyd 64.7 4.4 0.00015 42.7 3.9 32 79-111 31-62 (223)
489 1zej_A HBD-9, 3-hydroxyacyl-CO 64.6 5.6 0.00019 43.9 4.9 32 703-736 13-44 (293)
490 4a7p_A UDP-glucose dehydrogena 64.4 5.6 0.00019 46.7 5.2 34 702-736 8-41 (446)
491 1pzg_A LDH, lactate dehydrogen 64.3 4.7 0.00016 45.4 4.4 32 704-736 11-43 (331)
492 3g17_A Similar to 2-dehydropan 64.2 2.4 8.3E-05 47.0 2.0 32 81-113 4-35 (294)
493 1z82_A Glycerol-3-phosphate de 64.2 5.3 0.00018 45.1 4.9 34 702-736 14-47 (335)
494 1kyq_A Met8P, siroheme biosynt 64.2 3.4 0.00012 45.0 3.1 32 80-112 14-45 (274)
495 2v6b_A L-LDH, L-lactate dehydr 64.1 5.5 0.00019 44.3 4.9 31 705-736 3-35 (304)
496 2hjr_A Malate dehydrogenase; m 64.0 5.9 0.0002 44.6 5.1 32 704-736 16-48 (328)
497 3k96_A Glycerol-3-phosphate de 63.3 5.3 0.00018 45.5 4.6 33 703-736 30-62 (356)
498 1zcj_A Peroxisomal bifunctiona 63.3 5.4 0.00019 47.3 4.9 32 81-113 39-70 (463)
499 3oj0_A Glutr, glutamyl-tRNA re 63.1 3.7 0.00013 39.9 2.8 32 81-113 23-54 (144)
500 2ewd_A Lactate dehydrogenase,; 63.1 5.9 0.0002 44.3 4.9 32 704-736 6-38 (317)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=5.6e-87 Score=821.86 Aligned_cols=532 Identities=32% Similarity=0.536 Sum_probs=439.5
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC--CCCCcchhhHHhhh-cCCCCCccccccCcccccccCCCeee
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE--TDISDVPVLAAYLQ-LSGLDWSYKTEPSSTSCLAMEHNRCN 155 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~--~~~~~~p~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~ 155 (1306)
+|||||||||+|||++|.||||+++++|||||+|+.. .....+|....... ++.++|.|.++|+.. +.++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 6999999999999999999999889999999999865 23345666555444 478999999999975 6889999
Q ss_pred ecCcccccCcccccceEEecCChhhHHHHHhc-CCCCCChhhHHHHHHHhccCCCCCC-------CCCCCCCCCCceeee
Q psy1043 156 WPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWGAAEALYYFKKSEDNRNQYL-------AETPYHNSGGYLTVQ 227 (1306)
Q Consensus 156 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~~~~y~~~~e~~~~~~~-------~~~~~~~~~g~l~~~ 227 (1306)
|+||++|||+|++|+|+|.|+++.||+.|++. |+++|+|++++|||+++|++..+.. .+..+|+.+|++.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 9999999999999999999875421 134678999999999
Q ss_pred cCCCccHHHHHHHHHHHHc--CCC-CCCCCCCCccceeeecccccCCcccchhhhccccccCCCCeEEEeccEEEEEEec
Q psy1043 228 EAPWHTPLAEAFVRGGEEL--GYE-NRDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLID 304 (1306)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~--G~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~I~~~~~V~~I~~d 304 (1306)
...+..++...|.++++++ |++ ..|+|+....|++.++.++.+|.|+++..+||.++.+++|++|++++.|+||+++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 9988899999999999999 998 5688888889999999888899999999999999989999999999999999998
Q ss_pred ---CCCCeEEEEEEEeC-C-eEEEEEEcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccc-cccccccccCCc
Q psy1043 305 ---PKNRMAIGVEFVKN-H-QRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDHVGLG 378 (1306)
Q Consensus 305 ---~~~~~~~GV~~~~~-g-~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlp-VG~nL~dH~~~~ 378 (1306)
++.++|+||++... + +.++|+|+||||||||+|+||+|||+|||||+++|+++||+++.||| ||+|||||+.+.
T Consensus 238 ~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~~ 317 (566)
T 3fim_B 238 GTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLP 317 (566)
T ss_dssp EEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEEC
T ss_pred cCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccce
Confidence 22248999999874 5 77889999999999999999999999999999999999999999999 999999998755
Q ss_pred eEEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEEEEeecCCCCC--
Q psy1043 379 GFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGLAFVNTKYASD-- 456 (1306)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~-- 456 (1306)
. .|..+.+..... .+... ......+.+|...+.||++..+ .+..+|.++.....
T Consensus 318 ~-~~~~~~~~~~~~-~~~~~---------------------~~~~~~~~~~~~~~~G~l~~~~-~~~~~f~~~~~~~~~~ 373 (566)
T 3fim_B 318 A-AFFVNSNQTFDN-IFRDS---------------------SEFNVDLDQWTNTRTGPLTALI-ANHLAWLRLPSNSSIF 373 (566)
T ss_dssp C-EEEESCSCSSGG-GGTCH---------------------HHHHHHHHHHHHHSCSGGGCCS-CSEEEEECCCTTCGGG
T ss_pred E-EEEeCCCcccch-hhcCh---------------------HHHHHHHHHHHhcCCCCcccCh-hhheeeeccccchhhh
Confidence 4 566655432110 00000 0112345778889999998654 56778876542100
Q ss_pred ----------CchhhHhhcCCchhhhhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCCeeecCCCCChhhHHH
Q psy1043 457 ----------GGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLT 526 (1306)
Q Consensus 457 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p~i~~~y~~~~~D~~~ 526 (1306)
....+... +........+........+++...+++|.|||+|+|+++||++.|.|++||+.++.|++.
T Consensus 374 ~~~~~~~~~~~~pd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~ 451 (566)
T 3fim_B 374 QTFPDPAAGPNSAHWETI--FSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFT 451 (566)
T ss_dssp GTSCCCSSSTTSCSEEEE--EESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHH
T ss_pred hhhccccccCCCCCEEEE--ecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHH
Confidence 00000000 000000000111122357788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCcee
Q psy1043 527 LIEGVKIILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVH 606 (1306)
Q Consensus 527 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVVD~~~rV~ 606 (1306)
++++++.+++++++++++.+..... .|++ ....+|++|+||+|....+.+|++||||||++++.++|||++||||
T Consensus 452 ~~~~~~~~~~i~~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~ 526 (566)
T 3fim_B 452 MIQAVKSNLRFLSGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVK 526 (566)
T ss_dssp HHHHHHHHHHHHTSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBT
T ss_pred HHHHHHHHHHHHhCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEc
Confidence 9999999999999999988754322 2321 2467999999999999999999999999998886559999999999
Q ss_pred ccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHh
Q psy1043 607 GIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQD 645 (1306)
Q Consensus 607 gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~ 645 (1306)
|++||||||+||||+++++||++|+||||||+||+|+++
T Consensus 527 Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 527 GVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp TCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999975
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.4e-84 Score=798.77 Aligned_cols=537 Identities=25% Similarity=0.329 Sum_probs=411.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC---CCcchhhHHhhhcCCCCCccccccCcccccccCCCee
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD---ISDVPVLAAYLQLSGLDWSYKTEPSSTSCLAMEHNRC 154 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~---~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 154 (1306)
.+|||||||||+|||++|.||+|+++++|||||||+.... ....|........+.++|.|.++|+. +.++.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~~ 92 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQTA 92 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCCC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCee
Confidence 5799999999999999999999988999999999984221 12234333344467899999999885 367889
Q ss_pred eecCcccccCcccccceEEecCChhhHHHHHhcCCC-CCChhhHHHHHHHhccCCCCC--------CCCCCCCCCCCcee
Q psy1043 155 NWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNP-GWGAAEALYYFKKSEDNRNQY--------LAETPYHNSGGYLT 225 (1306)
Q Consensus 155 ~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~-~w~~~~~~~y~~~~e~~~~~~--------~~~~~~~~~~g~l~ 225 (1306)
.|+|||+|||+|++|+|+|.|+++.||+.|+..|++ +|+|++++|||+|+|++..+. ..+..+|+.+|++.
T Consensus 93 ~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~ 172 (583)
T 3qvp_A 93 LIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVH 172 (583)
T ss_dssp EECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEE
T ss_pred eccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEE
Confidence 999999999999999999999999999999999988 999999999999999986432 12456899999999
Q ss_pred eecC---CCccHHHHHHHHHHHHcCCC-CCCCCCCCccceeeeccccc-CCcccchhhhccccccCCCCeEEEeccEEEE
Q psy1043 226 VQEA---PWHTPLAEAFVRGGEELGYE-NRDINGEYQTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTK 300 (1306)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~~~-~g~r~s~~~~~l~~~~~~~nl~I~~~~~V~~ 300 (1306)
+... ....++.+.|.++++++|++ ..|+|+....|++.++.++. +|.|+++..+||.++.+++|++|++++.|+|
T Consensus 173 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~r 252 (583)
T 3qvp_A 173 AGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGK 252 (583)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEE
T ss_pred ecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEE
Confidence 9876 34578899999999999999 56889888899988877764 7899999999999999999999999999999
Q ss_pred EEecCC--CCeEEEEEEE-eCCeEEEEEEcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccccccccccccCC
Q psy1043 301 VLIDPK--NRMAIGVEFV-KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLKVGYNLQDHVGL 377 (1306)
Q Consensus 301 I~~d~~--~~~~~GV~~~-~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlpVG~nL~dH~~~ 377 (1306)
|+++.. +++|+||++. .+++.++|+|+||||||||+|+||+|||+|||||+++|+++||+++.|||||+|||||+.+
T Consensus 253 Il~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLqDH~~~ 332 (583)
T 3qvp_A 253 VLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQTTA 332 (583)
T ss_dssp EEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBBCCEEE
T ss_pred EEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchhhCccc
Confidence 999841 3499999998 5788889999999999999999999999999999999999999999999999999999765
Q ss_pred ceEEEEecCCcccchh--hhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEEEEeecCCCC
Q psy1043 378 GGFTFLINQPISLVQD--RLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGLAFVNTKYAS 455 (1306)
Q Consensus 378 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~ 455 (1306)
. +.|.++.+...... .+........ . .......|+....+.+... ..+..+|.......
T Consensus 333 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 393 (583)
T 3qvp_A 333 T-VRSRITSAGAGQGQAAWFATFNETFG-------------D----YSEKAHELLNTKLEQWAEE-AVARGGFHNTTALL 393 (583)
T ss_dssp E-EEEEECGGGCSBCEEEEEEEHHHHHG-------------G----GHHHHHHHHHHCHHHHHHH-HHHTTSCSCHHHHH
T ss_pred e-EEEEecCCccccccccccccHHHhhc-------------c----chHHHHHHHHhhcchhhcc-cccccCccccHHHH
Confidence 4 46666542110000 0000000000 0 0000111111110000000 00000000000000
Q ss_pred CCc---hhhHhhcCCchhhhhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCCee-ecCCCCChhhHHHHHHHH
Q psy1043 456 DGG---NQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRI-QPEYFSDHHDMLTLIEGV 531 (1306)
Q Consensus 456 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p~i-~~~y~~~~~D~~~~~~~~ 531 (1306)
... .......... ....++. . ...+.+....++|.|||+|+|+++||++.|.| ++||+.++.|++.+++++
T Consensus 394 ~~~~~~~~~~~~~~~~--~~~~~~~-~--~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~ 468 (583)
T 3qvp_A 394 IQYENYRDWIVNHNVA--YSELFLD-T--AGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAAT 468 (583)
T ss_dssp HHHHHHHHHHHHSCCE--EEEEEEE-C--TTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHH
T ss_pred hhhccchhhhccCCCC--cceeeec-c--CCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHH
Confidence 000 0000000000 0000000 0 11233444458999999999999999999999 999999999999999999
Q ss_pred HHHHHHHcCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCc
Q psy1043 532 KIILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNL 611 (1306)
Q Consensus 532 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVVD~~~rV~gv~NL 611 (1306)
+.+++++++++++.+... +..|+|......+|++|+|++|....+.+|++||||||++++ ++|||++|||||++||
T Consensus 469 ~~~~~i~~~~~~~~~~~~---~~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~L 544 (583)
T 3qvp_A 469 QLARNISNSGAMQTYFAG---ETIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGVQGL 544 (583)
T ss_dssp HHHHHHHTSTTHHHHEEE---EEESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSE
T ss_pred HHHHHHHhCcchhhcccc---ccCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecCCCe
Confidence 999999999999877532 334666555568999999999999999999999999998765 7999999999999999
Q ss_pred EEeeccCCCCCCCccchHHHHHHHHHHHHHHHHhHh
Q psy1043 612 RVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDWR 647 (1306)
Q Consensus 612 ~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~~~ 647 (1306)
||||+||||+++++||++|+||||||+||+|+++|.
T Consensus 545 rVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 545 RVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp EECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999986
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=5.6e-83 Score=788.05 Aligned_cols=529 Identities=30% Similarity=0.494 Sum_probs=421.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCC---CCCcchhhHHhhhcCCCCCccccccCcccccccCCCee
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET---DISDVPVLAAYLQLSGLDWSYKTEPSSTSCLAMEHNRC 154 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~---~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 154 (1306)
++|||||||||+|||++|.||||+++++|||||||+... ....+|........+.++|.|.++ +.++.+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~--------~~~r~~ 76 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT--------MVRRDD 76 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE--------EEEETT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE--------ECCccc
Confidence 579999999999999999999996558999999998632 233456666667778899999887 223444
Q ss_pred e------ecCcccccCcccccceEEecCChhhHHHHHhcCCCCCChhhHHHHHHHhccCCCCCC---CCCCCCCCCCcee
Q psy1043 155 N------WPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEALYYFKKSEDNRNQYL---AETPYHNSGGYLT 225 (1306)
Q Consensus 155 ~------~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~~~~y~~~~e~~~~~~~---~~~~~~~~~g~l~ 225 (1306)
. |+|||+|||+|++|+|+|.|+++.||+.|+..|+++|+|++++|||+++|.+..+.. .+..+|+..|++.
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 4 999999999999999999999999999999999999999999999999999865421 1234688999999
Q ss_pred eecCCCc---cHHHHHHHHHHHHcCCC-CCCCCCCCccceeeecccccCCcccchhhhccccccCCCCeEEEeccEEEEE
Q psy1043 226 VQEAPWH---TPLAEAFVRGGEELGYE-NRDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKV 301 (1306)
Q Consensus 226 ~~~~~~~---~~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~I~~~~~V~~I 301 (1306)
+....+. .+..+.+.++++++|++ ..|+++....|++..+.++.+|.|+++. .| +.+++|++|++++.|+||
T Consensus 157 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~s~~-~~---l~~r~Nl~v~~~a~v~ri 232 (577)
T 3q9t_A 157 ISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGSF-LF---VKNKPNITIVPEVHSKRL 232 (577)
T ss_dssp EEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEECCGG-GG---SSSCTTEEEECSEEEEEE
T ss_pred eeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEeeHH-HH---HhcCCCeEEEcCcEEEEE
Confidence 9887654 35788899999999999 5678888889999888888889888754 34 357899999999999999
Q ss_pred EecCCCCeEEEEEEEeC-CeEEEEEEcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccc-cccccccccCCce
Q psy1043 302 LIDPKNRMAIGVEFVKN-HQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDHVGLGG 379 (1306)
Q Consensus 302 ~~d~~~~~~~GV~~~~~-g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlp-VG~nL~dH~~~~~ 379 (1306)
++++.+++++||++... +..++++|+||||||||+|+||+|||+|||||+++|+++||+++.|+| ||+|||||+.+.
T Consensus 233 ~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~~- 311 (577)
T 3q9t_A 233 IINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVP- 311 (577)
T ss_dssp EEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEEE-
T ss_pred EEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCccee-
Confidence 99853449999999875 788899999999999999999999999999999999999999999999 999999998654
Q ss_pred EEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEEEEeecCCCCC---
Q psy1043 380 FTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGLAFVNTKYASD--- 456 (1306)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~--- 456 (1306)
+.|.++.+..... .+.. ..........+|...+.||++. +..+..+|........
T Consensus 312 ~~~~~~~~~~~~~-~~~~--------------------~~~~~~~~~~~y~~~~~Gpl~~-~~~~~~~~~~~~~~~~~~~ 369 (577)
T 3q9t_A 312 FVLRVKDGFGMDD-VLLR--------------------HGPKRDAVVSAYNKNRSGPVGS-GLLELVGFPRIDKYLEKDA 369 (577)
T ss_dssp EEEEECTTSSSHH-HHTS--------------------CSHHHHHHHHHHHHHSCSGGGC-CSEEEEEECCCHHHHTTCH
T ss_pred EEEEeCCCCccch-hhhc--------------------chhHHHHHHHHHHhcCCCCccc-chhheeEEeecChhhhcch
Confidence 4666665432110 0000 0011234567788889999874 3456667765321000
Q ss_pred ------------------CchhhHh-hcCCchhhhhcccCCcCCCCeEEEEeecCCcCcee-EEEeccCCCCCCCeeecC
Q psy1043 457 ------------------GGNQIRK-AHGLREDFYDEVYGPINNKDVWSAIPMLLRPRSRG-RIKLRSRNPLDYPRIQPE 516 (1306)
Q Consensus 457 ------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg-~v~l~~~d~~~~p~i~~~ 516 (1306)
....+.. ........+...+........+++.+.+++|.||| +|+|+++||++.|.|++|
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~ 449 (577)
T 3q9t_A 370 EYRKAKAANGGKDPFSPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLN 449 (577)
T ss_dssp HHHHHHHHTTTSCSSCTTSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECC
T ss_pred hhhhhhhccccccccCCCCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecC
Confidence 0000000 00000000000011111234678889999999999 999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHH-cCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCC
Q psy1043 517 YFSDHHDMLTLIEGVKIILELS-KTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDS 595 (1306)
Q Consensus 517 y~~~~~D~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~ 595 (1306)
|+.++.|++.++++++.+++++ ++++++.+..... .|+ ....+|++|+|++|....+.+|++||||||++++
T Consensus 450 yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~---~p~---~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~- 522 (577)
T 3q9t_A 450 FFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEY---PWE---MPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID- 522 (577)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEE---SSC---CCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-
T ss_pred cCCCccHHHHHHHHHHHHHHHHHhChhhhhcccccc---CCC---CCcCCHHHHHHHHHhccccccccccceecCCCCC-
Confidence 9999999999999999999999 8888888754322 222 3467999999999999999999999999998775
Q ss_pred CCccCCCCceeccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHhHhh
Q psy1043 596 EAVVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDWRK 648 (1306)
Q Consensus 596 ~sVVD~~~rV~gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~~~~ 648 (1306)
+||||++|||||++||||||+||||+++++||++|+||||||+||+|+++|++
T Consensus 523 ~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~~ 575 (577)
T 3q9t_A 523 QGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHKD 575 (577)
T ss_dssp TCSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred CceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhhh
Confidence 79999999999999999999999999999999999999999999999998753
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.2e-78 Score=756.99 Aligned_cols=531 Identities=24% Similarity=0.333 Sum_probs=409.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCCCC--c-chhhHHhhhcCCCCCccccccCcccccccCCCee
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDIS--D-VPVLAAYLQLSGLDWSYKTEPSSTSCLAMEHNRC 154 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~~~--~-~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 154 (1306)
.+|||||||+|++|+++|.+|++++|++|+|||+|....... . +|........+.++|.|.++| .+.++.+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~~ 96 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRTN 96 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCcee
Confidence 479999999999999999999997799999999998653222 2 454443334467899998887 2567889
Q ss_pred eecCcccccCcccccceEEecCChhhHHHHHhc-CCCCCChhhHHHHHHHhccCCCCCC--------CCCCCCCCCCcee
Q psy1043 155 NWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESL-GNPGWGAAEALYYFKKSEDNRNQYL--------AETPYHNSGGYLT 225 (1306)
Q Consensus 155 ~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~~~~y~~~~e~~~~~~~--------~~~~~~~~~g~l~ 225 (1306)
.|++|++|||+|++|+|+|+|+++.||+.|+.. |+++|+|++++|||+++|++..+.. .+..+|+.+|++.
T Consensus 97 ~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~ 176 (587)
T 1gpe_A 97 NIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQ 176 (587)
T ss_dssp EECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEE
T ss_pred eeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEE
Confidence 999999999999999999999999999999998 9999999999999999999876421 2456788899999
Q ss_pred eecC---CCccHHHHHHHHHHHHcCCC-CCCCCCCCccceeeecccc-cCCcccchhhhccccccCCCCeEEEeccEEEE
Q psy1043 226 VQEA---PWHTPLAEAFVRGGEELGYE-NRDINGEYQTGFMVAQGTV-RNGARCSTSKAFLQPVKTRPNLHISLHSHVTK 300 (1306)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~~-~~g~r~s~~~~~l~~~~~~~nl~I~~~~~V~~ 300 (1306)
+.++ ....+..+.|.++++++|++ ..++++..+.|++.++.++ .+|.|+++..+||.++++++|++|++++.|++
T Consensus 177 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~ 256 (587)
T 1gpe_A 177 SGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGK 256 (587)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEE
T ss_pred EccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEE
Confidence 8855 35688999999999999999 5678888888888887765 47899999999998888899999999999999
Q ss_pred EEecCCC--CeEEEEEEE-eCCeEEEEEEcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccccccccccccCC
Q psy1043 301 VLIDPKN--RMAIGVEFV-KNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLKVGYNLQDHVGL 377 (1306)
Q Consensus 301 I~~d~~~--~~~~GV~~~-~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlpVG~nL~dH~~~ 377 (1306)
|++++++ ++++||++. .+++.++|+|+|+||||||+|+||+|||+|||||+++|+++||+++.|||||+|||||+..
T Consensus 257 l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH~~~ 336 (587)
T 1gpe_A 257 VLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTTT 336 (587)
T ss_dssp EEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCCEEE
T ss_pred EEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcCccc
Confidence 9998532 389999998 6788889999889999999999999999999999999999999999999999999999865
Q ss_pred ceEEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEEEEeecCC-CC-
Q psy1043 378 GGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGLAFVNTKY-AS- 455 (1306)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~~~~~~~~-~~- 455 (1306)
. +.+.++++................ |...+.|+++.. ..+...|..... ..
T Consensus 337 ~-~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~G~~~~~-~~~~~~~~~~~~~~~~ 389 (587)
T 1gpe_A 337 T-VSSRASSAGAGQGQAVFFANFTET-------------------------FGDYAPQARDLL-NTKLDQWAEETVARGG 389 (587)
T ss_dssp E-EEEEECGGGCSBCEEEEEEEHHHH-------------------------HGGGHHHHHHHH-HHSHHHHHHHHHHTTS
T ss_pred c-eEEEeCCCcccccchHHHHHHHHH-------------------------HHhCCCCCcccc-ccceeeEeeccccccc
Confidence 4 456665432111000000000000 100011111100 000000100000 00
Q ss_pred -CC----chhhHhhcCC--chhh--hhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCC-eeecCCCCChhhHH
Q psy1043 456 -DG----GNQIRKAHGL--REDF--YDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYP-RIQPEYFSDHHDML 525 (1306)
Q Consensus 456 -~~----~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p-~i~~~y~~~~~D~~ 525 (1306)
.. ...+...... .... ...+.. ....+++...+++|.|||+|+|+++||++.| .|+++|+.++.|++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~ 466 (587)
T 1gpe_A 390 FHNVTALKVQYENYRNWLLDEDVAFAELFMD---TEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLL 466 (587)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSCCEEEEEEEE---CTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHH
T ss_pred ccccccccccHHHHhhhccCCCCcceeeeec---CCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHH
Confidence 00 0000000000 0000 000000 1135677778899999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHcCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCce
Q psy1043 526 TLIEGVKIILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRV 605 (1306)
Q Consensus 526 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVVD~~~rV 605 (1306)
.++++++.+++++++.+++.+... +..|++......+|++|+++++....+.+|++||||||+++ .+||||++|||
T Consensus 467 ~~~~~~~~~~~i~~~~~~~~~~~~---~~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~-~~sVVD~~lrV 542 (587)
T 1gpe_A 467 GQAAASKLARDLTSQGAMKEYFAG---ETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRE-LGGVVDATAKV 542 (587)
T ss_dssp HHHHHHHHHHHHHTSTTHHHHEEE---EEESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGG-GTCSBCTTCBB
T ss_pred HHHHHHHHHHHHHcCcchhhhccc---ccCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCC-CCceECCCCEE
Confidence 999999999999999998876532 12233222334799999999999999999999999999877 47999999999
Q ss_pred eccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHhHhh
Q psy1043 606 HGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDWRK 648 (1306)
Q Consensus 606 ~gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~~~~ 648 (1306)
||++||||||+||||+++++||++|+||||||+||+|++++++
T Consensus 543 ~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~~ 585 (587)
T 1gpe_A 543 YGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAK 585 (587)
T ss_dssp TTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999999999999999999999864
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.6e-74 Score=715.38 Aligned_cols=508 Identities=33% Similarity=0.511 Sum_probs=403.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC--CCcchhhHHhhhcCCCCCccccccCcccccccCCCeee
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD--ISDVPVLAAYLQLSGLDWSYKTEPSSTSCLAMEHNRCN 155 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~--~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 155 (1306)
.+|||||||+|++|+++|.+|++++|.+|+|||+|+.... ....|........+..+|.|.+.|+.. .++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 4799999999999999999999955999999999976532 123343332223567899999888763 567889
Q ss_pred ecCcccccCcccccceEEecCChhhHHHHHh-cCCCCCChhhHHHHHHHhccCCCCCCCCCCCCCCCCceeeecCCCccH
Q psy1043 156 WPRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTP 234 (1306)
Q Consensus 156 ~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~-~g~~~w~~~~~~~y~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 234 (1306)
|++|++|||+|.+|+|+|.|+.+.||+.|++ .|+++|+|++++|||+++|+...+. ....+|+..|++.+..+....+
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~-~~~~~~g~~Gpl~v~~~~~~~~ 165 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDP 165 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB-TTBTTSCBSCSEEEEECCSCCH
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC-CccccCCCCCCEEEecCCCCCH
Confidence 9999999999999999999999999999998 8999999999999999999987521 1145788889999988777899
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCC--ccceeeeccccc-CCcccchhhhccccccCCCCeEEEeccEEEEEEecCCCCeEE
Q psy1043 235 LAEAFVRGGEELGYENRDINGEY--QTGFMVAQGTVR-NGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAI 311 (1306)
Q Consensus 235 ~~~~~~~~~~~~G~~~~~~~~~~--~~g~~~~~~~~~-~g~r~s~~~~~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~ 311 (1306)
..+.|.++++++|++..+.++.. +.|++.++.++. +|.|+++..+||.++.++.|++|++++.|++|+++++ ++++
T Consensus 166 ~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~-~~~~ 244 (546)
T 2jbv_A 166 TGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD-RRCT 244 (546)
T ss_dssp HHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT-SBEE
T ss_pred HHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC-CeEE
Confidence 99999999999999955888777 888888888888 8999999999998887889999999999999999862 2899
Q ss_pred EEEEEeC--CeEEEEEEcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccc-cccccccccCCceEEEEecCCc
Q psy1043 312 GVEFVKN--HQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDHVGLGGFTFLINQPI 388 (1306)
Q Consensus 312 GV~~~~~--g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlp-VG~nL~dH~~~~~~~~~~~~~~ 388 (1306)
||++... ++.++|+|+|+||||||+|+||+||++|||||+++|+++||+++.|+| ||+|||||+.+. +.+.++.+.
T Consensus 245 GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~-~~~~~~~~~ 323 (546)
T 2jbv_A 245 GVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGV-VQFEAKQPM 323 (546)
T ss_dssp EEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECC-EEEEESSCC
T ss_pred EEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccce-EEEEecCCC
Confidence 9999876 777889998889999999999999999999999999999999999999 999999998765 356665431
Q ss_pred ccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEEEEeecCCCCCCch-hhHhh-cC
Q psy1043 389 SLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGLAFVNTKYASDGGN-QIRKA-HG 466 (1306)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~ 466 (1306)
.... . ...+..+|.........+. .+... ..
T Consensus 324 ~~~~----~-------------------------------------------~~~~~~~f~~~~~~~~~p~~~~~~~~~~ 356 (546)
T 2jbv_A 324 VAES----T-------------------------------------------QWWEIGIFTPTEDGLDRPDLMMHYGSVP 356 (546)
T ss_dssp CSCC----S-------------------------------------------SSCCEEEEECSSTTCSSCSEEEEEESSC
T ss_pred cccc----c-------------------------------------------chhheEEEEecCCCCCCCceEEEecccc
Confidence 1000 0 0000111111100000000 00000 00
Q ss_pred CchhhhhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCCeeecCCCCChh--hHHHHHHHHHHHHHHHcCcchh
Q psy1043 467 LREDFYDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHH--DMLTLIEGVKIILELSKTRSFR 544 (1306)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p~i~~~y~~~~~--D~~~~~~~~~~~~~i~~~~~~~ 544 (1306)
....+ ...... .....+.+...+++|.|||+|+|+++||++.|.|+++|+.++. |++.++++++.+++++++.+++
T Consensus 357 ~~~~~-~~~g~~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 434 (546)
T 2jbv_A 357 FDMNT-LRHGYP-TTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMA 434 (546)
T ss_dssp CCTTT-GGGTCC-CCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGT
T ss_pred ccccc-cccCcc-CCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchh
Confidence 00000 000000 1224567778889999999999999999999999999999999 9999999999999999999888
Q ss_pred hcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCcEEeeccCCCCCCC
Q psy1043 545 QYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLRVIDASIMPTIVS 624 (1306)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVVD~~~rV~gv~NL~V~DaSv~Pt~~~ 624 (1306)
.+.... ..|+ ....+|++|+++++....+.+|++||||||+++|+++|||++|||||++||||||+||||++++
T Consensus 435 ~~~~~~---~~p~---~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~ 508 (546)
T 2jbv_A 435 EWTGRE---LSPG---VEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVT 508 (546)
T ss_dssp TTEEEE---EESC---TTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCS
T ss_pred hccccc---ccCC---CCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCC
Confidence 765321 1233 2467999999999999999999999999997555789999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhHhh
Q psy1043 625 GNTNAPVIMIGEKGSDMIKQDWRK 648 (1306)
Q Consensus 625 ~NP~lTi~alAeraAd~I~~~~~~ 648 (1306)
+||++|+||||||+||+|++++..
T Consensus 509 ~np~~ti~aiAeraAd~I~~~~~~ 532 (546)
T 2jbv_A 509 VNPNITVMMIGERCADLIRSARAG 532 (546)
T ss_dssp SCCHHHHHHHHHHHHHHC------
T ss_pred cchHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999998753
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.5e-74 Score=716.82 Aligned_cols=499 Identities=30% Similarity=0.480 Sum_probs=398.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC-CCcchhhHHhhhcCCCCCccccccCcccccccCCCeeee
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD-ISDVPVLAAYLQLSGLDWSYKTEPSSTSCLAMEHNRCNW 156 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~-~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 156 (1306)
.+|||||||||++||++|.||||++|+||||||+|+.... ....|.....+..+.++|.|.++|+.. +.++.+.|
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~~ 91 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHHW 91 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCEE
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEec
Confidence 5899999999999999999999988999999999986432 234466666677889999999999875 57889999
Q ss_pred cCcccccCcccccceEEecCChhhHHHHHh-cCCCCCChhhHHHHHHHhccCCCCCCCCCCCCCCCCceeeecCC-CccH
Q psy1043 157 PRGKVVGGSSVLNYMLYVRGNRNDYNHWES-LGNPGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAP-WHTP 234 (1306)
Q Consensus 157 ~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~-~g~~~w~~~~~~~y~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~-~~~~ 234 (1306)
+||++|||+|++|+|+|+|+.+.||+.|.+ .++.+|+|++++|||++.|..... ....++..|++.+.... ...+
T Consensus 92 ~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~---~~~~~~~~g~~~~~~~~~~~~p 168 (526)
T 3t37_A 92 ARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG---GDGIHGKGGPLPIHLPADEVSP 168 (526)
T ss_dssp CCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT---TSSSSCSSCSEECBCCSTTSCH
T ss_pred cCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC---CccccCcCCCcCcccccccCCH
Confidence 999999999999999999999999999976 678899999999999999987542 34456667777665443 3478
Q ss_pred HHHHHHHHHHHcCCC-CCCCCCCCccceeeecccccCCcccchhhhccccc-cCCCCeEEEeccEEEEEEecCCCCeEEE
Q psy1043 235 LAEAFVRGGEELGYE-NRDINGEYQTGFMVAQGTVRNGARCSTSKAFLQPV-KTRPNLHISLHSHVTKVLIDPKNRMAIG 312 (1306)
Q Consensus 235 ~~~~~~~~~~~~G~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~-~~~~nl~I~~~~~V~~I~~d~~~~~~~G 312 (1306)
+.+.|.++++++|++ ..+.+.....+++.++..+..|.+.+...+|+.+. ..++|++|++++.|++|+++++ +++|
T Consensus 169 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~--~a~g 246 (526)
T 3t37_A 169 LARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN--QVRS 246 (526)
T ss_dssp HHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT--EEEE
T ss_pred HHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC--eEEE
Confidence 999999999999998 45666667777788888888999999999888654 5689999999999999999876 9999
Q ss_pred EEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccc-cccccccccCCceEEEEecCCcccc
Q psy1043 313 VEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDHVGLGGFTFLINQPISLV 391 (1306)
Q Consensus 313 V~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlp-VG~nL~dH~~~~~~~~~~~~~~~~~ 391 (1306)
|++...++...+.| ++||||||+|+||+|||+|||||+++|+++||+++.|+| ||+|||||+......+..+.+....
T Consensus 247 v~~~~~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~~~~ 325 (526)
T 3t37_A 247 LEVVGRQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPVPPS 325 (526)
T ss_dssp EEEEETTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCCCCC
T ss_pred EEEEecCceEEEee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCcchH
Confidence 99998888888888 579999999999999999999999999999999999999 9999999976554444444432211
Q ss_pred hhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEE-EEeecCCCCCCchhhHhhcCCchh
Q psy1043 392 QDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGL-AFVNTKYASDGGNQIRKAHGLRED 470 (1306)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1306)
...... ...+ .....+...+..+.. .+...+.
T Consensus 326 ~~~~~~-------------~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~----------------- 358 (526)
T 3t37_A 326 RLQHSE-------------SMAY-----------------MRADSFTAAGQPEIVVGCGVAPI----------------- 358 (526)
T ss_dssp SSCSEE-------------EEEE-----------------ECSSCSSCCSSCCEEEEEESSCC-----------------
T ss_pred hhcchh-------------hhhh-----------------hhcccccccCCcceeeecccccc-----------------
Confidence 000000 0000 000011111111110 0100000
Q ss_pred hhhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCCeeecCCCCChhhHHHHHHHHHHHHHHHcCcchhhccccc
Q psy1043 471 FYDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQYESRF 550 (1306)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~ 550 (1306)
....+........+.+...+++|.|||+|++++.||++.|.|+++|+.++.|++.++++++.+++++.+..+..+...
T Consensus 359 -~~~~~~~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~- 436 (526)
T 3t37_A 359 -VSESFPAPAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRER- 436 (526)
T ss_dssp -CCTTSCCCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEE-
T ss_pred -cccccccccCCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccc-
Confidence 000111122335677788899999999999999999999999999999999999999999999999999888776543
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCcEEeeccCCCCCCCccchHH
Q psy1043 551 HNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAP 630 (1306)
Q Consensus 551 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVVD~~~rV~gv~NL~V~DaSv~Pt~~~~NP~lT 630 (1306)
+..|++ ..++++++++++....+.||++||||||+++ +||||++|||||++|||||||||||+++++||++|
T Consensus 437 --~~~pg~----~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~--~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~t 508 (526)
T 3t37_A 437 --ELLPGT----PNSAAEMDDFIARSVITHHHPCGTCRMGKDP--DAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAA 508 (526)
T ss_dssp --ECSSCC----CCSHHHHHHHHHHHEEECSCCBCTTCBCSST--TCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHH
T ss_pred --ccCCCC----CCCHHHHHHHHHhcCccCcccCccccCCCCC--CccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHH
Confidence 233443 3688999999999999999999999999654 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy1043 631 VIMIGEKGSDMIK 643 (1306)
Q Consensus 631 i~alAeraAd~I~ 643 (1306)
|||||||+||+--
T Consensus 509 i~aiAEkaAd~~~ 521 (526)
T 3t37_A 509 VLAIAETFARQYH 521 (526)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999743
No 7
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.3e-68 Score=656.46 Aligned_cols=481 Identities=31% Similarity=0.503 Sum_probs=382.3
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC--CCCCCCCCCCcccc-CCCCCCCCccccCccccccCCCCeee
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE--SPLSDIPCTYPALQ-TSPLDWQYKTEPNDRACLGLNGRRSN 778 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~--~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1306)
+|||||||+|.+||++|.+|+|++|++|||||+|+.. .+...+|..+.... .+.++|.|.++|+.+ +.++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 6999999999999999999999779999999999865 33445666555444 478999999999986 7889999
Q ss_pred cCCcceecchhHhccceeecCChhhHHHHHHc-CCCCCCcccchHHHHHhhhccCCCC-------CCCCCCCCCCCcccc
Q psy1043 779 WPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAA-GNEGWSYRDTLPYFIKSESVNISSL-------VDSPYHGTQGPLSVE 850 (1306)
Q Consensus 779 ~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~~~~~~e~~~~~~~-------~~~~~~~~~g~~~~~ 850 (1306)
|++|++|||+|.+|+|+|.|+++.||+.|+.. ++.+|+|++++|||+++|.+..+.. .++.+|+..|++.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999988 9999999999999999999753321 234678899999999
Q ss_pred cCCCCChHHHHHHHHHHHc--CCCC-CCCCCCCccceeeccCCcCCCcccchhHhhhhhhhcCCCcEEEecceEEEEEec
Q psy1043 851 EFRYYSPVTEAFVESAGEL--GYEV-GDINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFE 927 (1306)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~--G~~~-~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I~~~ 927 (1306)
...+..+....++++++++ |++. .++++....|++.++.++..|.|+++..+||.++.++.|++|++++.|++|+++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 8888889999999999999 9887 567777788998888888899999999999999999999999999999999998
Q ss_pred CCCCCCceEEEEEEeC--C-eeeeEEEEeCcEEEEcCCCcchHHHhcCcC--------------------------CCCc
Q psy1043 928 PGPDGQMRATGVVVKK--G-RKDPVLVRARREVILSAGAIGSPQVYLIPN--------------------------EHTH 978 (1306)
Q Consensus 928 ~~~~~~~rv~GV~~~~--G-~~~~~~v~A~k~VVLAAGai~sp~LLl~p~--------------------------dh~~ 978 (1306)
...++.++++||++.+ | +.+ +|+|+|+||||||+|+||+|||+|. ||+.
T Consensus 238 ~~~~g~~rA~GVe~~~~~g~~~~--~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~ 315 (566)
T 3fim_B 238 GTTNGLPAFRCVEYAEQEGAPTT--TVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLL 315 (566)
T ss_dssp EEETTEEECCEEEEESSTTSCCE--EEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEE
T ss_pred cCCCCCCEEEEEEEEECCCceEE--EEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCcc
Confidence 1000126899999654 4 555 8999999999999999999999943 7765
Q ss_pred c--eEecCCCCCCCcc------------eeec-cccccCCCC---Ccccccc---------------CCCccc-cc--c-
Q psy1043 979 Y--QVDLTDGPEWPDI------------QLFF-ASAADNDDG---GLFNKRN---------------NGLKDD-YY--A- 1021 (1306)
Q Consensus 979 ~--~~~~~~~~~~p~~------------~~~~-~~~~~~~~~---~~~~~~~---------------~~~~~~-~~--~- 1021 (1306)
+ .|.++........ +++. ..+...... ..|.... ...++- ++ .
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~ 395 (566)
T 3fim_B 316 LPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQ 395 (566)
T ss_dssp ECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESS
T ss_pred ceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChhhheeeeccccchhhhhhhccccccCCCCCEEEEeccc
Confidence 4 3333221111000 0000 000000000 0000000 000000 00 0
Q ss_pred ---ccccccccCCcEEEEeeecccCCCcEEEEccCCCCCCceeecCCCCCHHHHHHHHHHHHHHHHHHhchhhhhccccc
Q psy1043 1022 ---GVFEPILYRDSITLAPLLLRPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVL 1098 (1306)
Q Consensus 1022 ---~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1306)
..+........+++...+++|.|||+|+|+++||++.|.|+++|+.++.|++.+.++++.+++++.+.+++.+...
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~- 474 (566)
T 3fim_B 396 WFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADFVIR- 474 (566)
T ss_dssp CCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTTEEE-
T ss_pred chhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCcccc-
Confidence 0001111234677888899999999999999999999999999999999999999999999999999888877533
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHH
Q psy1043 1099 HNVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAP 1178 (1306)
Q Consensus 1099 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lT 1178 (1306)
...|++ ....+|++|++++|....+.+|++|||+||++++.++|||+++||||++||||+|+||||+.+++||++|
T Consensus 475 --~~~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~ 550 (566)
T 3fim_B 475 --PFDPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAHTQGP 550 (566)
T ss_dssp --ESSGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCSSCTHHH
T ss_pred --ccCCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCCCCcCcHHH
Confidence 223432 2346899999999999999999999999999888768999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy1043 1179 TIMIAEKACDLIKED 1193 (1306)
Q Consensus 1179 i~ala~raAd~I~~~ 1193 (1306)
+||||||+||+|+++
T Consensus 551 ~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 551 IYLVGKQGADLIKAD 565 (566)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999999875
No 8
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=3.2e-67 Score=646.48 Aligned_cols=483 Identities=27% Similarity=0.405 Sum_probs=375.2
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC---CCCCCCCCCccccCCCCCCCCccccCccccccCCCCee
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES---PLSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRS 777 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1306)
.+|||||||||.+||++|.+|+|+++++|||||+|++.. +....|..+.....+.++|.|.++|+. ..++.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~~ 92 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQTA 92 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCCC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCee
Confidence 579999999999999999999997799999999998422 222345555555577899999999885 367888
Q ss_pred ecCCcceecchhHhccceeecCChhhHHHHHHcCCC-CCCcccchHHHHHhhhccCCC--------CCCCCCCCCCCCcc
Q psy1043 778 NWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNE-GWSYRDTLPYFIKSESVNISS--------LVDSPYHGTQGPLS 848 (1306)
Q Consensus 778 ~~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~-~w~~~~l~~~~~~~e~~~~~~--------~~~~~~~~~~g~~~ 848 (1306)
.|++|++|||+|.+|+|+|.|+++.||+.|+..++. +|+|++++|||+++|.+..+. ..+..+|+..||+.
T Consensus 93 ~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~ 172 (583)
T 3qvp_A 93 LIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVH 172 (583)
T ss_dssp EECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEE
T ss_pred eccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEE
Confidence 999999999999999999999999999999999988 999999999999999974321 13456889999999
Q ss_pred cccC---CCCChHHHHHHHHHHHcCCCC-CCCCCCCccceeeccCCc-CCCcccchhHhhhhhhhcCCCcEEEecceEEE
Q psy1043 849 VEEF---RYYSPVTEAFVESAGELGYEV-GDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYR 923 (1306)
Q Consensus 849 ~~~~---~~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~g~~~~~~~~-~~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~ 923 (1306)
+... ....+....++++++++|++. .++++....|+..++.+. ..|.|+++..+||.++.++.|++|++++.|++
T Consensus 173 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~r 252 (583)
T 3qvp_A 173 AGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGK 252 (583)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEE
T ss_pred ecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEE
Confidence 8765 344688999999999999987 578888888888777665 36889999999999999999999999999999
Q ss_pred EEecCCCCCCceEEEEEEe--CCeeeeEEEEeCcEEEEcCCCcchHHHhcCcC-------------------------CC
Q psy1043 924 VHFEPGPDGQMRATGVVVK--KGRKDPVLVRARREVILSAGAIGSPQVYLIPN-------------------------EH 976 (1306)
Q Consensus 924 I~~~~~~~~~~rv~GV~~~--~G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~-------------------------dh 976 (1306)
|++++.. ..++++||++. +|+.+ +|+|+||||||||+|+||+|||+|. ||
T Consensus 253 Il~d~~~-~~~ra~GV~~~~~~G~~~--~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLqDH 329 (583)
T 3qvp_A 253 VLLSQNG-TTPRAVGVEFGTHKGNTH--NVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQ 329 (583)
T ss_dssp EEEECSS-SSCEEEEEEEESSTTCEE--EEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBBCC
T ss_pred EEeccCC-CCCEEEEEEEEecCCcEE--EEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchhhC
Confidence 9998421 13799999954 67766 8999999999999999999999953 44
Q ss_pred Ccce--EecCCCCC-CCccee------ecccc------ccCCCCCcccc---ccCCC-ccccccc--------cc-----
Q psy1043 977 THYQ--VDLTDGPE-WPDIQL------FFASA------ADNDDGGLFNK---RNNGL-KDDYYAG--------VF----- 1024 (1306)
Q Consensus 977 ~~~~--~~~~~~~~-~p~~~~------~~~~~------~~~~~~~~~~~---~~~~~-~~~~~~~--------~~----- 1024 (1306)
+.+. +.++.... ...... .+... ........+.. ....+ ....... .+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (583)
T 3qvp_A 330 TTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYENYRDWIVNHNVA 409 (583)
T ss_dssp EEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHSCCE
T ss_pred ccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcccccccCccccHHHHhhhccchhhhccCCCC
Confidence 4331 11110000 000000 00000 00000000000 00000 0000000 00
Q ss_pred --cccc-cCCcEEEEeeecccCCCcEEEEccCCCCCCcee-ecCCCCCHHHHHHHHHHHHHHHHHHhchhhhhccccccc
Q psy1043 1025 --EPIL-YRDSITLAPLLLRPRSRGRIKLRTADPLDHPMI-RPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHN 1100 (1306)
Q Consensus 1025 --~~~~-~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i-~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1306)
.... ....+.+....++|.|+|+|+|+++||++.|.| +++|+.++.|++.+.++++.+++++++.+++.+...
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~--- 486 (583)
T 3qvp_A 410 YSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFAG--- 486 (583)
T ss_dssp EEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHHEEE---
T ss_pred cceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhcccc---
Confidence 0000 112334444558999999999999999999999 999999999999999999999999999988887632
Q ss_pred ccCCCCCCCCCCCHHHHHHHHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHH
Q psy1043 1101 VTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTI 1180 (1306)
Q Consensus 1101 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ 1180 (1306)
...|+|......+|++|+|++|....+.+|++||||||++++. +|||++|||||++||||+|+||||+.+++||++|+|
T Consensus 487 ~~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~-~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~ 565 (583)
T 3qvp_A 487 ETIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMG-GVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFY 565 (583)
T ss_dssp EEESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGT-CSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHH
T ss_pred ccCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCC-ceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHH
Confidence 4457776556678999999999999999999999999998776 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC
Q psy1043 1181 MIAEKACDLIKEDWG 1195 (1306)
Q Consensus 1181 ala~raAd~I~~~~~ 1195 (1306)
|||||+||+|+++|.
T Consensus 566 aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 566 AMALKISDAILEDYA 580 (583)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999999885
No 9
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=4.6e-66 Score=638.29 Aligned_cols=476 Identities=25% Similarity=0.348 Sum_probs=341.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCC--CCCcch-hhHHhhhcCCCCCccccccCcccccccCCCe
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET--DISDVP-VLAAYLQLSGLDWSYKTEPSSTSCLAMEHNR 153 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~--~~~~~p-~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 153 (1306)
..+|||||||||++||++|.||+| |++|||||+|+... .....| .+...+.. .+| |.+.++.. +.++.
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~--~~~-~~t~~q~~----~~~~~ 94 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ--EDD-GKTPVERF----VSEDG 94 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS--CCC-SSSSEEEE----ECTTS
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC--CCc-CcCCCccc----cCCCc
Confidence 357999999999999999999998 89999999998642 111122 22222222 234 55555543 34567
Q ss_pred eeecCcccccCcccccceEEecCChhhHHHHHhcCCCCCChhhHHHHHHHhccCCCCCCCCCCCCCCCCceeeecCCCcc
Q psy1043 154 CNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHT 233 (1306)
Q Consensus 154 ~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~~~~y~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 233 (1306)
+.+++|++|||+|.+|+|+|.|+++.||+.+ | .+|+|++++|||+++|+.... .+...
T Consensus 95 ~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~------------------~~~~~ 152 (536)
T 1ju2_A 95 IDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVY------------------KPNSQ 152 (536)
T ss_dssp CEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCB------------------CCCCC
T ss_pred ceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCC------------------CCCCC
Confidence 8899999999999999999999999999632 2 249999999999999986421 11235
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCCCCccceee-ecccccCCcccchhhhccccccCCCCeEEEeccEEEEEEecCC-CCeE
Q psy1043 234 PLAEAFVRGGEELGYENR-DINGEYQTGFMV-AQGTVRNGARCSTSKAFLQPVKTRPNLHISLHSHVTKVLIDPK-NRMA 310 (1306)
Q Consensus 234 ~~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~-~~~~~~~g~r~s~~~~~l~~~~~~~nl~I~~~~~V~~I~~d~~-~~~~ 310 (1306)
+....+.++++++|++.. ..+.....|... ......+|.|+++.. |+. .++++|++|++++.|++|+++++ ++++
T Consensus 153 ~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~-~~~-~~~~~~~~v~~~~~v~~i~~~~~~~~~~ 230 (536)
T 1ju2_A 153 SWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADE-LLN-KGNSNNLRVGVHASVEKIIFSNAPGLTA 230 (536)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESBCTTSBBCCGGG-GGG-GSCTTTEEEEESCEEEEEEECCSSSCBE
T ss_pred cHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEECCCCeEecHHH-hhh-hhcCCCcEEEeCCEEEEEEECCCCCCEE
Confidence 667888999999998631 000011112111 011125788887766 664 46789999999999999999863 2489
Q ss_pred EEEEEEe-CCeEEEEE--EcceEEEccCCCCcHHHHHHhCCCCcccccccCCCceeccc-cccccccccCCceEEEEecC
Q psy1043 311 IGVEFVK-NHQRHVIR--ARKEVILSGGAVNSPQILMLSGIGPKDHLTDMGIKTIQDLK-VGYNLQDHVGLGGFTFLINQ 386 (1306)
Q Consensus 311 ~GV~~~~-~g~~~~v~--A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~gI~~~~dlp-VG~nL~dH~~~~~~~~~~~~ 386 (1306)
+||++.+ +++.++++ ++++||||||+|+||+||++|||||+++|+++||+++.|+| ||+|||||+... +.+.++.
T Consensus 231 ~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~-~~~~~~~ 309 (536)
T 1ju2_A 231 TGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNF-INILPPN 309 (536)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEE-EEECCSS
T ss_pred EEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCccee-EEEEeCC
Confidence 9999985 56655554 77889999999999999999999999999999999999999 999999998543 3444433
Q ss_pred CcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCcccCCcceEEEEeecCCCCCCchhhHhhcC
Q psy1043 387 PISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHG 466 (1306)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (1306)
+........ ... . ..|...+.|++.. ... .+..
T Consensus 310 ~~~~~~~~~----------------~~~-~----------~~~~~~~~g~~~~------------~~~-----~~~~--- 342 (536)
T 1ju2_A 310 PIEPTIVTV----------------LGI-S----------NDFYQCSFSSLPF------------TTP-----PFGF--- 342 (536)
T ss_dssp CCCCCCCCE----------------EEE-C----------SSEEEEEEEECCC------------SSC-----CBTT---
T ss_pred Ccccccchh----------------hhH-H----------HHHHHcCCCCCCC------------Chh-----hhee---
Confidence 211000000 000 0 0010111111110 000 0000
Q ss_pred CchhhhhcccCCcCCCCeEEEEeecCCcCceeEEEe-ccCCCCCCCeeecCCCCChhhHHHHHHHHHHHHHHHcCcchhh
Q psy1043 467 LREDFYDEVYGPINNKDVWSAIPMLLRPRSRGRIKL-RSRNPLDYPRIQPEYFSDHHDMLTLIEGVKIILELSKTRSFRQ 545 (1306)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l-~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 545 (1306)
+... ...........+...+++|.|||+|+| +++||++.|.|++||+.++.|++.++++++.+++++++.+++.
T Consensus 343 ~~~~-----~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 417 (536)
T 1ju2_A 343 FPSS-----SYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKP 417 (536)
T ss_dssp BSSS-----CCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGG
T ss_pred ecCc-----ccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchh
Confidence 0000 000111123355667889999999999 9999999999999999999999999999999999999998887
Q ss_pred cccccccCCCCCCC------CCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCcEEeeccCC
Q psy1043 546 YESRFHNIPFPNCT------HIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSEAVVDPRLRVHGIGNLRVIDASIM 619 (1306)
Q Consensus 546 ~~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVVD~~~rV~gv~NL~V~DaSv~ 619 (1306)
+..... ...|++. .....+|++|++++|....+.+|++|||||| +|||++|||||++||||||||||
T Consensus 418 ~~~~~~-~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~ 490 (536)
T 1ju2_A 418 YKVEDL-PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTF 490 (536)
T ss_dssp GCSSCC-STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGC
T ss_pred hhcccc-ccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccC
Confidence 754321 1112211 0124589999999999999999999999999 69999999999999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHh
Q psy1043 620 PTIVSGNTNAPVIMIGEKGSDMIKQD 645 (1306)
Q Consensus 620 Pt~~~~NP~lTi~alAeraAd~I~~~ 645 (1306)
|+++++||++|+||||||+|+.|+++
T Consensus 491 P~~~~~np~~t~~aiAer~A~~ii~~ 516 (536)
T 1ju2_A 491 PYTPASHPQGFYLMLGRYVGIKILQE 516 (536)
T ss_dssp SSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999977766644
No 10
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=2.7e-64 Score=621.65 Aligned_cols=472 Identities=29% Similarity=0.469 Sum_probs=361.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC---CCCCCCCCCCccccCCCCCCCCccccCccccccCCCCee
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE---SPLSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRS 777 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1306)
++|||||||||.|||++|.+|+|+++++|||||||+.. .+...+|..+.....+.++|.|.++. .++.+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~--------~~r~~ 76 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTM--------VRRDD 76 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEE--------EEETT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEE--------CCccc
Confidence 47999999999999999999999744899999999862 23335666666677788999998872 23344
Q ss_pred e------cCCcceecchhHhccceeecCChhhHHHHHHcCCCCCCcccchHHHHHhhhccCCC-C--CCCCCCCCCCCcc
Q psy1043 778 N------WPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTLPYFIKSESVNISS-L--VDSPYHGTQGPLS 848 (1306)
Q Consensus 778 ~------~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~-~--~~~~~~~~~g~~~ 848 (1306)
. |++|++|||+|.+|+|+|.|+++.||+.|+..++.+|+|++++|||++.|.+.... . .+..+|+..|++.
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 4 99999999999999999999999999999999999999999999999999874322 0 1123678899999
Q ss_pred cccCCCCC---hHHHHHHHHHHHcCCCC-CCCCCCCccceeeccCCcCCCcccchhHhhhhhhhcCCCcEEEecceEEEE
Q psy1043 849 VEEFRYYS---PVTEAFVESAGELGYEV-GDINGERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRV 924 (1306)
Q Consensus 849 ~~~~~~~~---~~~~~~~~~~~~~G~~~-~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I 924 (1306)
+....... +....++++++++|++. .++++....|+.....++..|.|+++. .| +..+.|++|++++.|++|
T Consensus 157 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~s~~-~~---l~~r~Nl~v~~~a~v~ri 232 (577)
T 3q9t_A 157 ISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGSF-LF---VKNKPNITIVPEVHSKRL 232 (577)
T ss_dssp EEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEECCGG-GG---SSSCTTEEEECSEEEEEE
T ss_pred eeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEeeHH-HH---HhcCCCeEEEcCcEEEEE
Confidence 87765533 47788899999999987 567777788888877777778777654 34 356889999999999999
Q ss_pred EecCCCCCCceEEEEEEe--CCeeeeEEEEeCcEEEEcCCCcchHHHhcCcC--------------------------CC
Q psy1043 925 HFEPGPDGQMRATGVVVK--KGRKDPVLVRARREVILSAGAIGSPQVYLIPN--------------------------EH 976 (1306)
Q Consensus 925 ~~~~~~~~~~rv~GV~~~--~G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~--------------------------dh 976 (1306)
++++ ..++++||++. +|+.+ +|+|+|+||||||+|+||+|||+|. ||
T Consensus 233 ~~~~---~~~~a~GV~~~~~~g~~~--~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH 307 (577)
T 3q9t_A 233 IINE---ADRTCKGVTVVTAAGNEL--NFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDH 307 (577)
T ss_dssp EEET---TTTEEEEEEEEETTSCEE--EEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCC
T ss_pred EEeC---CCCEEEEEEEEeCCCcEE--EEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcC
Confidence 9984 12799999954 37666 8999999999999999999999943 67
Q ss_pred Ccce--EecCCCCCCCcc-------------eeecc-ccccCCCC---Cccccc------------------------cC
Q psy1043 977 THYQ--VDLTDGPEWPDI-------------QLFFA-SAADNDDG---GLFNKR------------------------NN 1013 (1306)
Q Consensus 977 ~~~~--~~~~~~~~~p~~-------------~~~~~-~~~~~~~~---~~~~~~------------------------~~ 1013 (1306)
+.+. +.++......+. ++... .+...... ..|... ..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (577)
T 3q9t_A 308 PGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPL 387 (577)
T ss_dssp EEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTT
T ss_pred cceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccchhheeEEeecChhhhcchhhhhhhhccccccccCCC
Confidence 6552 222211100000 00000 00000000 000000 00
Q ss_pred CCcc---cccc---cc----ccccccCCcEEEEeeecccCCCc-EEEEccCCCCCCceeecCCCCCHHHHHHHHHHHHHH
Q psy1043 1014 GLKD---DYYA---GV----FEPILYRDSITLAPLLLRPRSRG-RIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIG 1082 (1306)
Q Consensus 1014 ~~~~---~~~~---~~----~~~~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~ 1082 (1306)
..+. .+.. .. +........+++...+++|.||| +|+|+|+||++.|.|+++|+.++.|++.++++++.+
T Consensus 388 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~ 467 (577)
T 3q9t_A 388 GQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFS 467 (577)
T ss_dssp SCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHH
T ss_pred CCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHH
Confidence 0000 0000 00 00011234567888899999999 999999999999999999999999999999999999
Q ss_pred HHHH-hchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEE
Q psy1043 1083 YAIT-RTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRV 1161 (1306)
Q Consensus 1083 ~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V 1161 (1306)
++++ ++++++.+... ...|+. ...+|++|+|++|....+.+|++|||+||++++. ||||+++||||++||||
T Consensus 468 ~~i~~~~~~~~~~~~~---e~~p~~---~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~-~VVD~~lrV~Gv~~LrV 540 (577)
T 3q9t_A 468 YDLLFKGEGFKDLVES---EYPWEM---PLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQ-GVVDPKLKVHGIKKLRV 540 (577)
T ss_dssp HHHHHHSTTGGGTEEE---EESSCC---CTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTT-CSBCTTCBBTTCBSEEE
T ss_pred HHHHHhChhhhhcccc---ccCCCC---CcCCHHHHHHHHHhccccccccccceecCCCCCC-ceECCCCeEeCCCCcEE
Confidence 9999 88888877543 223432 3468999999999999999999999999998886 99999999999999999
Q ss_pred ecCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHhCC
Q psy1043 1162 IDASIMPTIVSGNTNAPTIMIAEKACDLIKEDWGV 1196 (1306)
Q Consensus 1162 ~D~Sv~P~~~~~Np~lTi~ala~raAd~I~~~~~~ 1196 (1306)
+|+||||+.+++||++|+||||||+||+|+++|..
T Consensus 541 vDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~~ 575 (577)
T 3q9t_A 541 ADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHKD 575 (577)
T ss_dssp CSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred eecccccCCCCCccHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999863
No 11
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=2.3e-62 Score=610.53 Aligned_cols=498 Identities=24% Similarity=0.328 Sum_probs=353.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCCC-----------------CcchhhHHhhhcCCCCCccccc
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDI-----------------SDVPVLAAYLQLSGLDWSYKTE 140 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~~-----------------~~~p~~~~~~~~~~~~w~~~~~ 140 (1306)
.+|||||||||++|+++|.+|++ .|++|||||+|+..... ..+|.+...+ |. .
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~-~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~---~ 75 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESL------FT---D 75 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGG------GT---C
T ss_pred CceeEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHh------hc---C
Confidence 57999999999999999999999 69999999999753210 0111110000 10 0
Q ss_pred cCcccccccCCCeeeecCcccccCcccccceEEecCChhhHHH---HHhcCCCCCChhhHHHHHHHhccCCCCCCCCCCC
Q psy1043 141 PSSTSCLAMEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNH---WESLGNPGWGAAEALYYFKKSEDNRNQYLAETPY 217 (1306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~---w~~~g~~~w~~~~~~~y~~~~e~~~~~~~~~~~~ 217 (1306)
+... .......+++|++|||+|.+|+|+|+|+.+.||+. | ..+|+|++ +||++.|...... .+
T Consensus 76 ~~~~----~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~~----~~ 141 (546)
T 1kdg_A 76 SNPF----WWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPST----DH 141 (546)
T ss_dssp SCCT----TBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCCB----SC
T ss_pred CCcc----ccccccccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCCC----cc
Confidence 0000 00112456799999999999999999999999987 7 35788888 9999998864311 11
Q ss_pred CCCCCceeeecCCCccHHHHHHHHHHHHcCCCCCCCC---CCCccceeeecccccCCcccchhhhccccccCCCCeEEEe
Q psy1043 218 HNSGGYLTVQEAPWHTPLAEAFVRGGEELGYENRDIN---GEYQTGFMVAQGTVRNGARCSTSKAFLQPVKTRPNLHISL 294 (1306)
Q Consensus 218 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~I~~ 294 (1306)
+...|. .+..+....+.++++++|++..+.+ .....|++.++.++.+|.|+++..+|+.++.+++|++|++
T Consensus 142 ~~~~g~------~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~ 215 (546)
T 1kdg_A 142 PSTDGQ------RYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKT 215 (546)
T ss_dssp CSTTSC------CCSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEEC
T ss_pred CCCCCC------ccCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEe
Confidence 222232 2345677888999999998743332 1234577777778889999999999998888889999999
Q ss_pred ccEEEEEEecCCCCeEEEEEEEe--CCe--EEEEEEcceEEEccCCCCcHHHHHHhCCCCccccccc------CCCce--
Q psy1043 295 HSHVTKVLIDPKNRMAIGVEFVK--NHQ--RHVIRARKEVILSGGAVNSPQILMLSGIGPKDHLTDM------GIKTI-- 362 (1306)
Q Consensus 295 ~~~V~~I~~d~~~~~~~GV~~~~--~g~--~~~v~A~k~VVLaAGai~Sp~LLl~SGiG~~~~L~~~------gI~~~-- 362 (1306)
++.|++|+++++ +++||++.+ +++ +.++.+.++||||||+++||+||++|||||+++|+++ ||+++
T Consensus 216 ~~~V~~i~~~~~--~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~ 293 (546)
T 1kdg_A 216 NVMVSNVVRNGS--QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQ 293 (546)
T ss_dssp SCCEEEEEEETT--EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCG
T ss_pred CCEEEEEEEeCC--EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccc
Confidence 999999999865 999999876 343 3456677889999999999999999999999999999 59885
Q ss_pred ---eccccccccccccCCceEEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCCCccc
Q psy1043 363 ---QDLKVGYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNGPLTV 439 (1306)
Q Consensus 363 ---~dlpVG~nL~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G~l~~ 439 (1306)
.|+|||+|||||+.+.. .+. ..+..... .... ....+ .......|...+.|++..
T Consensus 294 ~~~~dlpVG~nL~DH~~~~~-~~~-~~~~~~~~-~~~~---------~~~~~----------~~~~~~~~~~~~~g~~~~ 351 (546)
T 1kdg_A 294 NQWINLPVGMNAQDNPSINL-VFT-HPSIDAYE-NWAD---------VWSNP----------RPADAAQYLANQSGVFAG 351 (546)
T ss_dssp GGCBCCCTTTTBBCCCCEEE-EEE-CTTCCCGG-GGTT---------TTTSC----------CHHHHHHHHHHSCSGGGS
T ss_pred cccccCCcccCcccCcceeE-EEe-cCCccccc-chhh---------hhcch----------hHHHHHHHHHcCCccccc
Confidence 79999999999986543 444 22110000 0000 00000 112345666677788764
Q ss_pred CCcceEEEEeecCCCCCC-chhhHhhcC-CchhhhhcccCCcCCCCeEEEEeecCCc-CceeEEEeccCCCCCCCeeecC
Q psy1043 440 MGGVEGLAFVNTKYASDG-GNQIRKAHG-LREDFYDEVYGPINNKDVWSAIPMLLRP-RSRGRIKLRSRNPLDYPRIQPE 516 (1306)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~p-~srg~v~l~~~d~~~~p~i~~~ 516 (1306)
... . ..|+......+. ...+..... .... ... ..+......+.+...+++| .|||+|+|++.| ..|.|+++
T Consensus 352 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~ 425 (546)
T 1kdg_A 352 ASP-K-LNFWRAYSGSDGFTRYAQGTVRPGAAS-VNS-SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPP 425 (546)
T ss_dssp CSC-C-EEEEEEEECTTSCEEEEEEEEEESCSC-CCC-SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECC
T ss_pred CCc-c-eEEEEccCCCCcchhhhhheecccccc-ccc-ccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCccccc
Confidence 321 1 123332111110 000000000 0000 000 0001112456777788898 999999999887 56778899
Q ss_pred CCCChhhHHHHHHHHHHHHHHHcCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCCCC
Q psy1043 517 YFSDHHDMLTLIEGVKIILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETDSE 596 (1306)
Q Consensus 517 y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~ 596 (1306)
|+.++.|++.++++++.+++++++.+...+ ..|++ ..+++++.++++....+.+|++||||||+++ .+
T Consensus 426 y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~-~~ 493 (546)
T 1kdg_A 426 WLVNPVDKTVLLQALHDVVSNIGSIPGLTM-------ITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSP-QS 493 (546)
T ss_dssp TTCSHHHHHHHHHHHHHHTTTGGGSTTCEE-------EESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCT-TT
T ss_pred ccCCchHHHHHHHHHHHHHHHhcCCCcccc-------cCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCC-CC
Confidence 999999999999999999999886542221 12332 2578888888888888999999999999875 58
Q ss_pred CccCCCCceeccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHhHh
Q psy1043 597 AVVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDWR 647 (1306)
Q Consensus 597 sVVD~~~rV~gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~~~ 647 (1306)
||||++|||||++|||||||||||+++++||++|+||||||+||+|++++.
T Consensus 494 ~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 544 (546)
T 1kdg_A 494 AVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAG 544 (546)
T ss_dssp CSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred eeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999998764
No 12
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=4e-61 Score=599.38 Aligned_cols=482 Identities=27% Similarity=0.395 Sum_probs=369.1
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCCC--CC-CCCCCccccCCCCCCCCccccCccccccCCCCee
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPL--SD-IPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRS 777 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~--~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1306)
.+|||||||+|.+|+++|.+|++++|++|+|||+|...... .. +|..+.......++|.|.++| ++.+..+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~~ 96 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRTN 96 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCcee
Confidence 47999999999999999999999559999999999865321 12 555554444567889998877 2567889
Q ss_pred ecCCcceecchhHhccceeecCChhhHHHHHHc-CCCCCCcccchHHHHHhhhccCC-------CC-CCCCCCCCCCCcc
Q psy1043 778 NWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAA-GNEGWSYRDTLPYFIKSESVNIS-------SL-VDSPYHGTQGPLS 848 (1306)
Q Consensus 778 ~~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~~~~~~e~~~~~-------~~-~~~~~~~~~g~~~ 848 (1306)
.|++|++|||+|.+|+|++.|+.+.||+.|... ++.+|+|++++|||+++|++... +. .++.+|+..||+.
T Consensus 97 ~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~ 176 (587)
T 1gpe_A 97 NIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQ 176 (587)
T ss_dssp EECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEE
T ss_pred eeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEE
Confidence 999999999999999999999999999999988 99999999999999999997432 11 2456788889988
Q ss_pred cccC---CCCChHHHHHHHHHHHcCCCC-CCCCCCCccceeeccCCc-CCCcccchhHhhhhhhhcCCCcEEEecceEEE
Q psy1043 849 VEEF---RYYSPVTEAFVESAGELGYEV-GDINGERQTGFTRAHGTL-KNGLRCSTAKAYLRPIIARPNLHVSLHSHAYR 923 (1306)
Q Consensus 849 ~~~~---~~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~g~~~~~~~~-~~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~ 923 (1306)
+... ....+..+.+.++++++|++. .+.++....|++.+..+. ..|.|+++..+||.+++++.|++|++++.|++
T Consensus 177 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~ 256 (587)
T 1gpe_A 177 SGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGK 256 (587)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEE
T ss_pred EccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEE
Confidence 8743 356788999999999999987 567777777887776654 47899999999998888899999999999999
Q ss_pred EEecCCCCCCceEEEEEE--eCCeeeeEEEEeCcEEEEcCCCcchHHHhcCcC-------------------------CC
Q psy1043 924 VHFEPGPDGQMRATGVVV--KKGRKDPVLVRARREVILSAGAIGSPQVYLIPN-------------------------EH 976 (1306)
Q Consensus 924 I~~~~~~~~~~rv~GV~~--~~G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~-------------------------dh 976 (1306)
|++++++ ..++++||++ .+|+.+ +|+|+++||||||+|+||+|||++. ||
T Consensus 257 l~~~~~~-~~~~~~GV~~~~~~g~~~--~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH 333 (587)
T 1gpe_A 257 VLFKQTA-SGPQAVGVNFGTNKAVNF--DVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQ 333 (587)
T ss_dssp EEEEEET-TEEEEEEEEEEEETTEEE--EEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCC
T ss_pred EEECCCC-CCCEEEEEEEEeCCCcEE--EEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcC
Confidence 9997521 1258999995 467766 8999778999999999999999943 44
Q ss_pred Ccce--EecCCCCCCCcceeecc---ccccCCCCCc----------ccccc---C--CCcc---ccccccccc-------
Q psy1043 977 THYQ--VDLTDGPEWPDIQLFFA---SAADNDDGGL----------FNKRN---N--GLKD---DYYAGVFEP------- 1026 (1306)
Q Consensus 977 ~~~~--~~~~~~~~~p~~~~~~~---~~~~~~~~~~----------~~~~~---~--~~~~---~~~~~~~~~------- 1026 (1306)
+... +.++............. ..+.....+. +.... . .... ..+...+..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (587)
T 1gpe_A 334 TTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWLLDEDVA 413 (587)
T ss_dssp EEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHSCCE
T ss_pred cccceEEEeCCCcccccchHHHHHHHHHHHhCCCCCccccccceeeEeecccccccccccccccccHHHHhhhccCCCCc
Confidence 4431 11111000000000000 0000000000 00000 0 0000 000000000
Q ss_pred -----cccCCcEEEEeeecccCCCcEEEEccCCCCCCc-eeecCCCCCHHHHHHHHHHHHHHHHHHhchhhhhccccccc
Q psy1043 1027 -----ILYRDSITLAPLLLRPRSRGRIKLRTADPLDHP-MIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHN 1100 (1306)
Q Consensus 1027 -----~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p-~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1306)
......+.+...+++|.|+|+|+|+++||++.| .|+++|+.++.|++.+.++++.+++++++.+++.+...
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~--- 490 (587)
T 1gpe_A 414 FAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAG--- 490 (587)
T ss_dssp EEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEE---
T ss_pred ceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhccc---
Confidence 001134667778889999999999999999999 99999999999999999999999999999988877532
Q ss_pred ccCCCCCCCCCCCHHHHHHHHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHH
Q psy1043 1101 VTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTI 1180 (1306)
Q Consensus 1101 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ 1180 (1306)
...|++......++++|+++++....+.+|++||||||++++. ||||++|||||++||||+|+||||+++++||++|+|
T Consensus 491 ~~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~-sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~ 569 (587)
T 1gpe_A 491 ETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELG-GVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFY 569 (587)
T ss_dssp EEESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGT-CSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHH
T ss_pred ccCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCCC-ceECCCCEEECCCCcEEeeeccCCCCCCcchHHHHH
Confidence 2234433334468999999999998899999999999998876 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC
Q psy1043 1181 MIAEKACDLIKEDWG 1195 (1306)
Q Consensus 1181 ala~raAd~I~~~~~ 1195 (1306)
|||||+||+|++++.
T Consensus 570 aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 570 GMALKVADAILDDYA 584 (587)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999999874
No 13
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=1.5e-60 Score=593.83 Aligned_cols=467 Identities=30% Similarity=0.486 Sum_probs=359.9
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC-CCCCCCCCCccccCCCCCCCCccccCccccccCCCCeeec
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES-PLSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRSNW 779 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1306)
.+|||||||||.+|+++|.+|||++|++|||||+|+... +....|..++.+..+.++|.|.++|+.+ +.++.+.|
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~~ 91 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHHW 91 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCEE
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEec
Confidence 479999999999999999999997799999999998643 2334566677778889999999999877 77889999
Q ss_pred CCcceecchhHhccceeecCChhhHHHHHH-cCCCCCCcccchHHHHHhhhccCCCCCCCCCCCCCCCcccccCC-CCCh
Q psy1043 780 PRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFR-YYSP 857 (1306)
Q Consensus 780 ~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~-~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 857 (1306)
++|++|||+|.+|++.+.|+.+.||+.|.. .++.+|+|++++|||++.|.... .....++..|+..+.... ...+
T Consensus 92 ~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~---~~~~~~~~~g~~~~~~~~~~~~p 168 (526)
T 3t37_A 92 ARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPL---GGDGIHGKGGPLPIHLPADEVSP 168 (526)
T ss_dssp CCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTT---TTSSSSCSSCSEECBCCSTTSCH
T ss_pred cCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccC---CCccccCcCCCcCcccccccCCH
Confidence 999999999999999999999999999976 46789999999999999998632 233455666776665443 3467
Q ss_pred HHHHHHHHHHHcCCCC-CCCCCCCccceeeccCCcCCCcccchhHhhhhhh-hcCCCcEEEecceEEEEEecCCCCCCce
Q psy1043 858 VTEAFVESAGELGYEV-GDINGERQTGFTRAHGTLKNGLRCSTAKAYLRPI-IARPNLHVSLHSHAYRVHFEPGPDGQMR 935 (1306)
Q Consensus 858 ~~~~~~~~~~~~G~~~-~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~L~~~-~~~~g~~i~~~~~V~~I~~~~~~~~~~r 935 (1306)
..+.+.+++.++|++. .+.+.....++..+...+..|.+.+...+++.+. ..+.|++|++++.|++|++++ ++
T Consensus 169 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~-----~~ 243 (526)
T 3t37_A 169 LARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEG-----NQ 243 (526)
T ss_dssp HHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEET-----TE
T ss_pred HHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecC-----Ce
Confidence 8899999999999987 4455566667777778888899999998888654 568899999999999999998 79
Q ss_pred EEEEEE-eCCeeeeEEEEeCcEEEEcCCCcchHHHhcCcC--------------------------CCCcce---EecCC
Q psy1043 936 ATGVVV-KKGRKDPVLVRARREVILSAGAIGSPQVYLIPN--------------------------EHTHYQ---VDLTD 985 (1306)
Q Consensus 936 v~GV~~-~~G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~--------------------------dh~~~~---~~~~~ 985 (1306)
++||++ ..+... .+.|+ +||||||+|+||+|||+|. ||+... +....
T Consensus 244 a~gv~~~~~~~~~--~~~a~-~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~ 320 (526)
T 3t37_A 244 VRSLEVVGRQGSA--EVFAD-QIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARK 320 (526)
T ss_dssp EEEEEEEETTEEE--EEEEE-EEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESS
T ss_pred EEEEEEEecCceE--EEeec-ceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccC
Confidence 999994 455544 67785 6999999999999999953 554321 11110
Q ss_pred CC---CCCcc-eeecccc-ccCCCCCccccccCCCccccccccccccccCCcEEEEeeecccCCCcEEEEccCCCCCCce
Q psy1043 986 GP---EWPDI-QLFFASA-ADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRIKLRTADPLDHPM 1060 (1306)
Q Consensus 986 ~~---~~p~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~ 1060 (1306)
.. ..... ...+... .......+.......... .....+........+.+...+.+|.|+|++++++.||.+.|.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~ 399 (526)
T 3t37_A 321 PVPPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAP-IVSESFPAPAAGSAYSLLFGITHPTSRGSVRISGPELGDRLI 399 (526)
T ss_dssp CCCCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSC-CCCTTSCCCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCE
T ss_pred CcchHhhcchhhhhhhhcccccccCCcceeeeccccc-ccccccccccCCcceeeeccccCccccCcceeccCCCccCce
Confidence 00 00000 0001000 000000000000000000 001111112233456777788999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhcccCcccccccccccCCC
Q psy1043 1061 IRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPD 1140 (1306)
Q Consensus 1061 i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GtcrMG~~ 1140 (1306)
|+++|+.++.|++.+.++++.+++++.+..+..+... ...|++. .++++++++++....+.+|++||||||+|
T Consensus 400 i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~---~~~pg~~----~~~~~~~~~ir~~~~t~~H~~GTcrMG~d 472 (526)
T 3t37_A 400 IDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRER---ELLPGTP----NSAAEMDDFIARSVITHHHPCGTCRMGKD 472 (526)
T ss_dssp EECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEE---ECSSCCC----CSHHHHHHHHHHHEEECSCCBCTTCBCSS
T ss_pred eccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccc---ccCCCCC----CCHHHHHHHHHhcCccCcccCccccCCCC
Confidence 9999999999999999999999999988887766533 3345543 57889999999999999999999999987
Q ss_pred CCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHHHHHHHHHHHHHH
Q psy1043 1141 SDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKACDLIKE 1192 (1306)
Q Consensus 1141 ~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ala~raAd~I~~ 1192 (1306)
+ . ||||++|||||++||||||+||||+++++||++||||||||+||+.-.
T Consensus 473 ~-~-sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 473 P-D-AVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp T-T-CSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred C-C-ccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 6 4 899999999999999999999999999999999999999999998754
No 14
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.3e-60 Score=590.99 Aligned_cols=475 Identities=31% Similarity=0.497 Sum_probs=362.5
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCC--CCCCCCCCccccCCCCCCCCccccCccccccCCCCeee
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESP--LSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRSN 778 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1306)
.+|||||||+|.+|+++|.+|++++|++|+|||+|+.... ....|..+.....+..+|.|.+.|+.. .+..+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 3699999999999999999999955899999999986532 123344333233456789988887753 467789
Q ss_pred cCCcceecchhHhccceeecCChhhHHHHHH-cCCCCCCcccchHHHHHhhhccCCCCCCCCCCCCCCCcccccCCCCCh
Q psy1043 779 WPRGKVIGGSSVLNAMLYVRGNRRDYDAWEA-AGNEGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSP 857 (1306)
Q Consensus 779 ~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~-~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 857 (1306)
|++|++|||+|.+|++.+.|+.+.||+.|.. .+..+|+|++++|||+++|+..... ....+|+..|++.+.......+
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~-~~~~~~g~~Gpl~v~~~~~~~~ 165 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDP 165 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB-TTBTTSCBSCSEEEEECCSCCH
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC-CccccCCCCCCEEEecCCCCCH
Confidence 9999999999999999999999999999998 7889999999999999999874311 0145778889998877777789
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCC--ccceeeccCCcC-CCcccchhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCc
Q psy1043 858 VTEAFVESAGELGYEVGDINGER--QTGFTRAHGTLK-NGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQM 934 (1306)
Q Consensus 858 ~~~~~~~~~~~~G~~~~~~~~~~--~~g~~~~~~~~~-~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~ 934 (1306)
..+.+.++++++|++..+.++.. +.|+..+..+|. .|.|.++..+||.++.++.|++|++++.|++|+++++ +
T Consensus 166 ~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~----~ 241 (546)
T 2jbv_A 166 TGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD----R 241 (546)
T ss_dssp HHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT----S
T ss_pred HHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC----C
Confidence 99999999999999887677666 778888888888 8999999999998887789999999999999999751 5
Q ss_pred eEEEEEEeC---CeeeeEEEEeCcEEEEcCCCcchHHHhcCcC--------------------------CCCcc--eEec
Q psy1043 935 RATGVVVKK---GRKDPVLVRARREVILSAGAIGSPQVYLIPN--------------------------EHTHY--QVDL 983 (1306)
Q Consensus 935 rv~GV~~~~---G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~--------------------------dh~~~--~~~~ 983 (1306)
+++||++.+ |+.+ +|+|+|+||||||+|+||+||+++. ||+.+ .+.+
T Consensus 242 ~~~GV~~~~~~~g~~~--~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~ 319 (546)
T 2jbv_A 242 RCTGVDIVDSAFGHTH--RLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEA 319 (546)
T ss_dssp BEEEEEEESSTTSCEE--EEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEE
T ss_pred eEEEEEEEECCCCcEE--EEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEe
Confidence 899999644 6655 8999878999999999999999832 55544 2222
Q ss_pred CCCCC---CCcce-eeccccccCCCCCcc--ccccCCCccccccccccccccCCcEEEEeeecccCCCcEEEEccCCCCC
Q psy1043 984 TDGPE---WPDIQ-LFFASAADNDDGGLF--NKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRIKLRTADPLD 1057 (1306)
Q Consensus 984 ~~~~~---~p~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~ 1057 (1306)
+.... ....+ ..|...........+ ..........+ ...-.. .....+.+...+++|.|+|+|+|+++||++
T Consensus 320 ~~~~~~~~~~~~~~~~f~~~~~~~~~p~~~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~~ 397 (546)
T 2jbv_A 320 KQPMVAESTQWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMNT-LRHGYP-TTENGFSLTPNVTHARSRGTVRLRSRDFRD 397 (546)
T ss_dssp SSCCCSCCSSSCCEEEEECSSTTCSSCSEEEEEESSCCCTTT-GGGTCC-CCSSEEEEEEEETTCCCCBEEECSSSCTTS
T ss_pred cCCCcccccchhheEEEEecCCCCCCCceEEEeccccccccc-cccCcc-CCCCeEEEEEEEcccCcccEEEecCCCCCC
Confidence 11100 00000 000000000000000 00000000000 000000 122456677778999999999999999999
Q ss_pred CceeecCCCCCHH--HHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhcccCccccccccc
Q psy1043 1058 HPMIRPNYLYDEK--DLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTC 1135 (1306)
Q Consensus 1058 ~p~i~~~y~~~~~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gtc 1135 (1306)
.|.|+++|+.++. |++.+.++++.+.+++++.+++.+... ...|++ ...+|++|+++++....+.+|++|||
T Consensus 398 ~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~p~~---~~~sd~~~~~~ir~~~~~~~H~~GTc 471 (546)
T 2jbv_A 398 KPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGR---ELSPGV---EAQTDEELQDYIRKTHNTVYHPVGTV 471 (546)
T ss_dssp CCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEE---EEESCT---TCCSHHHHHHHHHHHCEECSCCBCTT
T ss_pred CceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccc---cccCCC---CCCCHHHHHHHHHhcCCccccccccc
Confidence 9999999999999 999999999999999999888776532 223443 34689999999999888999999999
Q ss_pred ccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHhC
Q psy1043 1136 KMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKACDLIKEDWG 1195 (1306)
Q Consensus 1136 rMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ala~raAd~I~~~~~ 1195 (1306)
|||++.|++||||++|||||++||||+|+||||+++++||++|+||||||+||+|++++.
T Consensus 472 rMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 531 (546)
T 2jbv_A 472 RMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARA 531 (546)
T ss_dssp CBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-----
T ss_pred ccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhcc
Confidence 999644455899999999999999999999999999999999999999999999998874
No 15
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=4.1e-59 Score=573.62 Aligned_cols=456 Identities=18% Similarity=0.197 Sum_probs=322.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC-CC--cchhhHHhhhcCCCCCccccccCc-----------
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD-IS--DVPVLAAYLQLSGLDWSYKTEPSS----------- 143 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~-~~--~~p~~~~~~~~~~~~w~~~~~~~~----------- 143 (1306)
.+||+||||+|++|+++|.+|++ .|++|+|||+|..... .. ..+... .......+|.+.++|+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 47999999999999999999999 7999999999985331 11 111111 11233478998887762
Q ss_pred ---ccccc----cCCCeeeecCcccccCcccccceEEecCChhhHHHHHhcCCCCCChhhHH-HHHHHhccCCCCCCCCC
Q psy1043 144 ---TSCLA----MEHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEAL-YYFKKSEDNRNQYLAET 215 (1306)
Q Consensus 144 ---~~~~~----~~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~~~-~y~~~~e~~~~~~~~~~ 215 (1306)
..+.+ ..++.+.|++|++|||+|++|+|+|+|+++.||+.|. ++|.|++++ |||+++|+.+.+.....
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~ 157 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHIDT 157 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCCH
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCCc
Confidence 11111 1567889999999999999999999999999999996 679999999 99999999764321111
Q ss_pred CCCCCCCceeeecCCCccHHHHHHHHHHHHcCC-----C-CCCCCC---------CCccceeeecccccCCcccchhhhc
Q psy1043 216 PYHNSGGYLTVQEAPWHTPLAEAFVRGGEELGY-----E-NRDING---------EYQTGFMVAQGTVRNGARCSTSKAF 280 (1306)
Q Consensus 216 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~G~-----~-~~~~~~---------~~~~g~~~~~~~~~~g~r~s~~~~~ 280 (1306)
.++ ...+ ..+..+.|.++++++|+ + ..++++ ..+..++.|...|.+| |.++..+|
T Consensus 158 ~~~--------~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~ 227 (504)
T 1n4w_A 158 KWF--------EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTY 227 (504)
T ss_dssp HHH--------HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTH
T ss_pred ccc--------cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHH
Confidence 111 0011 24678899999999999 3 223321 1223334455567889 99999999
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-CC---eEEEEEEcceEEEccCCCCcHHHHHHhC-CCCccccc
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-NH---QRHVIRARKEVILSGGAVNSPQILMLSG-IGPKDHLT 355 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-~g---~~~~v~A~k~VVLaAGai~Sp~LLl~SG-iG~~~~L~ 355 (1306)
|.++.+++|++|++++.|++|++++++++++||++.+ ++ +..+++|+ +||||||+|+||+|||+|| ||
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig------ 300 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG------ 300 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT------
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC------
Confidence 9888888899999999999999986444899999974 55 56789997 7999999999999999999 87
Q ss_pred ccCCCceeccccccccccccCCceEEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcCCC
Q psy1043 356 DMGIKTIQDLKVGYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMGNG 435 (1306)
Q Consensus 356 ~~gI~~~~dlpVG~nL~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~G 435 (1306)
||+++.+. ||+||+||+.+.. .+.. .+... .|
T Consensus 301 --~i~~~~~~-VG~nl~dh~~~~~-~~~~-~~~~~-------------------------------------------~~ 332 (504)
T 1n4w_A 301 --TLPNLNSE-VGAGWGPNGNIMT-ARAN-HMWNP-------------------------------------------TG 332 (504)
T ss_dssp --SSTTCCTT-TTCCBBCTTCEEE-EEEC-CTTCC-------------------------------------------CC
T ss_pred --CCCCCChh-hccccccCCccee-eecc-CCCCc-------------------------------------------cc
Confidence 68877653 9999999975432 2211 11000 01
Q ss_pred CcccCCcceEEEEeecCCCCCCchhhHhhcCCchhhhhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCCeeec
Q psy1043 436 PLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRIQP 515 (1306)
Q Consensus 436 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p~i~~ 515 (1306)
++. ++.....+..... .+.+... ....+... .. ..+.++..+.+|.|||+|+|++.|| .|++
T Consensus 333 ~~~--~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~--------~~--~~~~~~~~~~~p~srG~V~L~s~~~----~i~~ 394 (504)
T 1n4w_A 333 AHQ--SSIPALGIDAWDN-SDSSVFA-EIAPMPAG--------LE--TWVSLYLAITKNPQRGTFVYDAATD----RAKL 394 (504)
T ss_dssp SCC--CSSCCEEEEECCS-STTCEEE-EEECCCCS--------SC--CCEEEEEEEECCCCCBCEEEETTTT----EEEE
T ss_pred CcC--CCccEEEEeccCC-CCCceEE-EeccCChH--------HH--hhhhhheeeeccCCCcEEEecCCCC----ceEe
Confidence 110 0011112222110 0000000 00000000 00 2455666778999999999998765 6899
Q ss_pred CCCCChhhHHHHHHHHH-HHHHHHcCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCCCC
Q psy1043 516 EYFSDHHDMLTLIEGVK-IILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPETD 594 (1306)
Q Consensus 516 ~y~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~~d 594 (1306)
+|+.++ | +.++++++ .+++++++.+. + ++.+. +.. + |+++ ...+.+|++||||||
T Consensus 395 ~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~---------~~~~~--~~~-~-~~~~---~~~~~~H~~GTcrMG---- 450 (504)
T 1n4w_A 395 NWTRDQ-N-APAVNAAKALFDRINKANGT--I---------YRYDL--FGT-Q-LKAF---ADDFCYHPLGGCVLG---- 450 (504)
T ss_dssp CCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C---------BCCSS--SSS-S-CCSE---ECSEESSCBCSSCTT----
T ss_pred ccCCCc-C-HHHHHHHHHHHHHHHhccCC--C---------cCCch--hhh-h-hhhh---ccCccccccCCceee----
Confidence 999999 8 77888888 88888876542 1 11000 000 0 1111 456889999999999
Q ss_pred CCCccCCCCceeccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHhHhh
Q psy1043 595 SEAVVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDWRK 648 (1306)
Q Consensus 595 ~~sVVD~~~rV~gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~~~~ 648 (1306)
+|||++|||||++||||||+||||+++++||++|+||||||+||+|++++..
T Consensus 451 --~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 502 (504)
T 1n4w_A 451 --KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVT 502 (504)
T ss_dssp --TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred --eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhcc
Confidence 7999999999999999999999999999999999999999999999998764
No 16
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=7.7e-58 Score=562.14 Aligned_cols=454 Identities=17% Similarity=0.161 Sum_probs=317.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCCCCcchh---hHHhh-hcCCCCCccccccCcc--------
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDISDVPV---LAAYL-QLSGLDWSYKTEPSST-------- 144 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~~~~~-------- 144 (1306)
..+||+||||+|++|+++|.+|++ .|++|+|||+|..... ..|. +.... .....+|.+.++|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 357999999999999999999999 7999999999975431 1221 11111 2345789998887621
Q ss_pred -----ccccc----CCCeeeecCcccccCcccccceEEecCChhhHHHHHhcCCCCCChhhHH-HHHHHhccCCCCCCCC
Q psy1043 145 -----SCLAM----EHNRCNWPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGWGAAEAL-YYFKKSEDNRNQYLAE 214 (1306)
Q Consensus 145 -----~~~~~----~~~~~~~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~~~-~y~~~~e~~~~~~~~~ 214 (1306)
.+.++ .++.+.|++|++|||+|++|+|+|+|+.+.||+.|. ++|.|++++ |||+++|+++.+....
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~ 161 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNID 161 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCCC
Confidence 11111 567889999999999999999999999999999996 479999999 9999999987532110
Q ss_pred CCCCCCCCceeeecCCC-ccHHHHHHHHHHHHcCC-----C-CCCCCC---------CCccceeeecccccCCcccchhh
Q psy1043 215 TPYHNSGGYLTVQEAPW-HTPLAEAFVRGGEELGY-----E-NRDING---------EYQTGFMVAQGTVRNGARCSTSK 278 (1306)
Q Consensus 215 ~~~~~~~g~l~~~~~~~-~~~~~~~~~~~~~~~G~-----~-~~~~~~---------~~~~g~~~~~~~~~~g~r~s~~~ 278 (1306)
. .. .... ..+..+.|.++++++|+ + ..++++ ..+..++.|...|.+| |+++..
T Consensus 162 ~-------~~---~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~ 230 (507)
T 1coy_A 162 Q-------AW---FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDK 230 (507)
T ss_dssp H-------HH---HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTT
T ss_pred C-------cc---ccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHH
Confidence 0 00 0111 25678889999999999 4 223321 1122334455567889 999999
Q ss_pred hccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-CC---eEEEEEEcceEEEccCCCCcHHHHHHhC-CCCccc
Q psy1043 279 AFLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-NH---QRHVIRARKEVILSGGAVNSPQILMLSG-IGPKDH 353 (1306)
Q Consensus 279 ~~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-~g---~~~~v~A~k~VVLaAGai~Sp~LLl~SG-iG~~~~ 353 (1306)
+||.++.+++|++|++++.|++|++++++++++||++.. ++ +..+++|+ +||||||+|+||+|||+|| ||
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG---- 305 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKAQG---- 305 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT----
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhcccCC----
Confidence 999888888899999999999999986444899999976 55 36789997 7999999999999999999 97
Q ss_pred ccccCCCceeccccccccccccCCceEEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcchhhHHHHHHHHHcC
Q psy1043 354 LTDMGIKTIQDLKVGYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDRLESVQSVLNYAMMG 433 (1306)
Q Consensus 354 L~~~gI~~~~dlpVG~nL~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~ 433 (1306)
+||+..+. ||+||++|+.... ... .... ..
T Consensus 306 ----~lpnl~d~-VG~~l~~h~~~~~-~~~-~~~~-------------------------------------------~~ 335 (507)
T 1coy_A 306 ----HLPNLSSQ-VGEGWGNNGNIMV-GRA-NHMW-------------------------------------------DA 335 (507)
T ss_dssp ----SSTTSCTT-TTCCBBCTTEEEE-EEE-CCTT-------------------------------------------SC
T ss_pred ----CCCccChh-hCCccccCCcccc-ccc-cccc-------------------------------------------cc
Confidence 34544333 9999999974221 100 0000 00
Q ss_pred CCCcccCCcceEEEEeecCCCCCCchhhHhhcCCchhhhhcccCCcCCCCeEEEEeecCCcCceeEEEeccCCCCCCCee
Q psy1043 434 NGPLTVMGGVEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGPINNKDVWSAIPMLLRPRSRGRIKLRSRNPLDYPRI 513 (1306)
Q Consensus 434 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srg~v~l~~~d~~~~p~i 513 (1306)
.|++..... ...+.... ..+.+. +.....+... + ...+.++..+.+|.|+|+|+|+++|| .|
T Consensus 336 ~~~~~~~~~--~~~~~~~~-~~~~~~-~~~~~~~~~~-----~-----~~~~~~~~~~~~p~s~G~V~L~s~~~----~i 397 (507)
T 1coy_A 336 TGSKQATIP--TMGIDNWA-DPTAPI-FAEIAPLPAG-----L-----ETYVSLYLAITKNPERARFQFNSGTG----KV 397 (507)
T ss_dssp CCSCCCSSC--CEEEECTT-CTTSCE-EEEEECCCCS-----S-----CCCEEEEEEEECCCCCBCEEEETTTT----EE
T ss_pred ccccCCCcc--eEEEeccC-CCCCCc-EEEeccCCHH-----H-----hhheeeeEEEeeeCCCcEEEEccCCC----ce
Confidence 011100000 00000000 000000 0000000000 0 02345556678899999999998765 89
Q ss_pred ecCCCCChhhHHHHHHHHH-HHHHHHcCcchhhcccccccCCCCCCCCCCCCCHHHHHHHHHhccCCCccccccccccCC
Q psy1043 514 QPEYFSDHHDMLTLIEGVK-IILELSKTRSFRQYESRFHNIPFPNCTHIPMYTDAYYECMIRHYSVTIYHPVGTCKMGPE 592 (1306)
Q Consensus 514 ~~~y~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~H~~GT~rMG~~ 592 (1306)
+++|+.++ | ..++++++ .+++++++.+. +. ..+. +.+|+ +++ ...+.+|++||||||
T Consensus 398 ~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~----~~~~-------~~~d~--~~~---~~~~~~H~~GTcrMG-- 455 (507)
T 1coy_A 398 DLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IY----RTDL-------FGVYY--KTW---GDDFTYHPLGGVLLN-- 455 (507)
T ss_dssp EECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CB----CSSC-------C--CC--CSS---BCSEESCCBCSSCTT--
T ss_pred eeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cc----cCcc-------cccch--hhh---cccccccccCCcchh--
Confidence 99999999 8 56777777 88888876541 11 1111 11111 122 456789999999999
Q ss_pred CCCCCccCCCCceeccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHhHh
Q psy1043 593 TDSEAVVDPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQDWR 647 (1306)
Q Consensus 593 ~d~~sVVD~~~rV~gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~~~ 647 (1306)
+|||++|||||++||||||+||||+++++||++||||||||+||+|+++..
T Consensus 456 ----~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 456 ----KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp ----TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ----heECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhc
Confidence 499999999999999999999999999999999999999999999998653
No 17
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.7e-52 Score=517.10 Aligned_cols=454 Identities=24% Similarity=0.319 Sum_probs=305.7
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC--CCCCCCCCCccccCCCCCCCCccccCccccccCCCCee
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES--PLSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRS 777 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1306)
..+|||||||||.+|+++|.+|+| |++|||||+|+... +....|..+..... ..+| |.+.++.. ..+..+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~~q~~----~~~~~~ 95 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ-QEDD-GKTPVERF----VSEDGI 95 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH-SCCC-SSSSEEEE----ECTTSC
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc-CCCc-CcCCCccc----cCCCcc
Confidence 357999999999999999999998 89999999998532 11112211111000 1123 44455443 345667
Q ss_pred ecCCcceecchhHhccceeecCChhhHHHHHHcCCCCCCcccchHHHHHhhhccCCCCCCCCCCCCCCCcccccCCCCCh
Q psy1043 778 NWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSP 857 (1306)
Q Consensus 778 ~~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 857 (1306)
.+++|++|||+|.+|++.+.|+.+.||+.+ + .+|.|++++|||+++|+.... .+...+
T Consensus 96 ~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~------------------~~~~~~ 153 (536)
T 1ju2_A 96 DNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVY------------------KPNSQS 153 (536)
T ss_dssp EEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCB------------------CCCCCH
T ss_pred eeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCC------------------CCCCCc
Confidence 889999999999999999999999999631 1 249999999999999986210 012346
Q ss_pred HHHHHHHHHHHcCCCCC-CCCCCCccceee-ccCCcCCCcccchhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCce
Q psy1043 858 VTEAFVESAGELGYEVG-DINGERQTGFTR-AHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMR 935 (1306)
Q Consensus 858 ~~~~~~~~~~~~G~~~~-~~~~~~~~g~~~-~~~~~~~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~r 935 (1306)
....+.+++.++|+... ........|... ....+..|.++++.. ++. .+++.|++|++++.|++|++++. ..++
T Consensus 154 ~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~-~~~-~~~~~~~~v~~~~~v~~i~~~~~--~~~~ 229 (536)
T 1ju2_A 154 WQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADE-LLN-KGNSNNLRVGVHASVEKIIFSNA--PGLT 229 (536)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESBCTTSBBCCGGG-GGG-GSCTTTEEEEESCEEEEEEECCS--SSCB
T ss_pred HHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEECCCCeEecHHH-hhh-hhcCCCcEEEeCCEEEEEEECCC--CCCE
Confidence 77888899999998541 000011111110 011125677777665 664 56789999999999999999861 1248
Q ss_pred EEEEEEe--CCeeeeEEEEeCcEEEEcCCCcchHHHhcCcC--------------------------CCCcceEecCCCC
Q psy1043 936 ATGVVVK--KGRKDPVLVRARREVILSAGAIGSPQVYLIPN--------------------------EHTHYQVDLTDGP 987 (1306)
Q Consensus 936 v~GV~~~--~G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~--------------------------dh~~~~~~~~~~~ 987 (1306)
++||++. +|+.+++.+++.++||||||+|+||+|||++. ||+...+......
T Consensus 230 ~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~ 309 (536)
T 1ju2_A 230 ATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPN 309 (536)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSS
T ss_pred EEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCC
Confidence 9999965 56655223336678999999999999999842 5554321111000
Q ss_pred CC-Cc-ceee-ccccccCCCCCccccccCCCccccccccccccccCCcEEEEeeecccCCCcEEEE-ccCCCCCCceeec
Q psy1043 988 EW-PD-IQLF-FASAADNDDGGLFNKRNNGLKDDYYAGVFEPILYRDSITLAPLLLRPRSRGRIKL-RTADPLDHPMIRP 1063 (1306)
Q Consensus 988 ~~-p~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~~~d~~~~p~i~~ 1063 (1306)
.. .. .... ....+.....+.+......+ .++......+.......+...+++|.|+|+|+| +++||++.|.|++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~ 387 (536)
T 1ju2_A 310 PIEPTIVTVLGISNDFYQCSFSSLPFTTPPF--GFFPSSSYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKF 387 (536)
T ss_dssp CCCCCCCCEEEECSSEEEEEEEECCCSSCCB--TTBSSSCCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECC
T ss_pred CcccccchhhhHHHHHHHcCCCCCCCChhhh--eeecCcccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecc
Confidence 00 00 0000 00000000000000000000 000000011111122345556789999999999 9999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCC------CCCCCHHHHHHHHhcccCccccccccccc
Q psy1043 1064 NYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEH------TTPLSDAYWECQVRHYTMTIYHPVGTCKM 1137 (1306)
Q Consensus 1064 ~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~H~~GtcrM 1137 (1306)
+|+.++.|++.+.++++.+++++.+.+++.+..... ...|++.. ....++++|+++++....+.+|++|||+|
T Consensus 388 ~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrM 466 (536)
T 1ju2_A 388 NYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDL-PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLV 466 (536)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCC-STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCB
T ss_pred cccCCccHHHHHHHHHHHHHHHHcCccchhhhcccc-ccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCC
Confidence 999999999999999999999999998888764321 11222211 12357899999999999999999999999
Q ss_pred CCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHHHHHHHHHHHHH-HHhCC
Q psy1043 1138 GPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKACDLIK-EDWGV 1196 (1306)
Q Consensus 1138 G~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ala~raAd~I~-~~~~~ 1196 (1306)
| +|||++|||||++||||||+||||+++++||++|+||||||+|+.|+ ++|..
T Consensus 467 G------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~ 520 (536)
T 1ju2_A 467 G------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSAS 520 (536)
T ss_dssp T------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 9 69999999999999999999999999999999999999999776555 56543
No 18
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=4.1e-49 Score=484.67 Aligned_cols=437 Identities=19% Similarity=0.199 Sum_probs=297.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCC-C--CCCCCCCccccCCCCCCCCccccCc-----------
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESP-L--SDIPCTYPALQTSPLDWQYKTEPND----------- 766 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~-~--~~~p~~~~~~~~~~~~~~~~~~~~~----------- 766 (1306)
.+||+||||+|++|+++|++|++ .|++|+|||+|..... . ...+... .......+|.+.++|+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 46999999999999999999999 6999999999985331 1 1222211 11233467888877652
Q ss_pred ---cccccC----CCCeeecCCcceecchhHhccceeecCChhhHHHHHHcCCCCCCcccch-HHHHHhhhccCCCCCCC
Q psy1043 767 ---RACLGL----NGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTL-PYFIKSESVNISSLVDS 838 (1306)
Q Consensus 767 ---~~~~~~----~~~~~~~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~~~~~~e~~~~~~~~~~ 838 (1306)
..+.++ .+..+.|++|++|||+|.+|++++.|+.+.||+.|. .+|.|++++ |||+++|+.........
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~ 157 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHIDT 157 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCCH
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCCc
Confidence 112221 566889999999999999999999999999999996 578999999 99999998631110000
Q ss_pred CCCCCCCCcccccCCCCChHHHHHHHHHHHcCCC-----C-CCCCC---------CCccceeeccCCcCCCcccchhHhh
Q psy1043 839 PYHGTQGPLSVEEFRYYSPVTEAFVESAGELGYE-----V-GDING---------ERQTGFTRAHGTLKNGLRCSTAKAY 903 (1306)
Q Consensus 839 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~-----~-~~~~~---------~~~~g~~~~~~~~~~g~~~~~~~~~ 903 (1306)
.++ ...+ ..+....+.++++++|++ . .+.++ ..+..++.|..+|..| |.++..+|
T Consensus 158 ~~~--------~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~ 227 (504)
T 1n4w_A 158 KWF--------EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTY 227 (504)
T ss_dssp HHH--------HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTH
T ss_pred ccc--------cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHH
Confidence 000 0000 135778899999999983 3 12211 1223445566678899 99999999
Q ss_pred hhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe--CC---eeeeEEEEeCcEEEEcCCCcchHHHhcCcC----
Q psy1043 904 LRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK--KG---RKDPVLVRARREVILSAGAIGSPQVYLIPN---- 974 (1306)
Q Consensus 904 L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~--~G---~~~~~~v~A~k~VVLAAGai~sp~LLl~p~---- 974 (1306)
|.++.++.|++|++++.|++|++++ +.++++||++. +| +.. +|+|+ +||||||+|+||+|||++.
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~---~g~~~~gV~~~~~~g~~~~~~--~v~A~-~VIlaaG~~~s~~lL~~Sg~ig~ 301 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTK---DGGYALTVEQKDTDGKLLATK--EISCR-YLFLGAGSLGSTELLVRARDTGT 301 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECT---TSSEEEEEEEECTTCCEEEEE--EEEEE-EEEECSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECC---CCCEEEEEEEeCCCCccceeE--EEeeC-EEEEccCCCCCHHHHHhccccCC
Confidence 9888778889999999999999985 22589999965 55 334 78997 6999999999999999853
Q ss_pred -------------CCCcceEecCCCCCCCcceeeccccccCCCCCcccccc-CCCccccccccccccccCCcEEEEeeec
Q psy1043 975 -------------EHTHYQVDLTDGPEWPDIQLFFASAADNDDGGLFNKRN-NGLKDDYYAGVFEPILYRDSITLAPLLL 1040 (1306)
Q Consensus 975 -------------dh~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1306)
||+.+.+.......-+ .. .+... .....+.... ...+.......+.+. ....+.++..+.
T Consensus 302 i~~~~~~VG~nl~dh~~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 375 (504)
T 1n4w_A 302 LPNLNSEVGAGWGPNGNIMTARANHMWNP-TG-AHQSS---IPALGIDAWDNSDSSVFAEIAPMPAG-LETWVSLYLAIT 375 (504)
T ss_dssp STTCCTTTTCCBBCTTCEEEEEECCTTCC-CC-SCCCS---SCCEEEEECCSSTTCEEEEEECCCCS-SCCCEEEEEEEE
T ss_pred CCCCChhhccccccCCcceeeeccCCCCc-cc-CcCCC---ccEEEEeccCCCCCceEEEeccCChH-HHhhhhhheeee
Confidence 3332211100000000 00 00000 0000000000 000000000000000 013456666778
Q ss_pred ccCCCcEEEEccCCCCCCceeecCCCCCHHHHHHHHHHHH-HHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHH
Q psy1043 1041 RPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAK-IGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWEC 1119 (1306)
Q Consensus 1041 ~p~s~g~v~l~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 1119 (1306)
+|.|+|+|+|++.|+ .|+++|+.++ | +.+.++++ .+++++.+.+. + ++... +.. + +++
T Consensus 376 ~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~---------~~~~~--~~~-~-~~~ 434 (504)
T 1n4w_A 376 KNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I---------YRYDL--FGT-Q-LKA 434 (504)
T ss_dssp CCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C---------BCCSS--SSS-S-CCS
T ss_pred ccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C---------cCCch--hhh-h-hhh
Confidence 999999999998775 6899999998 8 67778888 78888765542 1 11110 000 0 111
Q ss_pred HHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHhC
Q psy1043 1120 QVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKACDLIKEDWG 1195 (1306)
Q Consensus 1120 ~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ala~raAd~I~~~~~ 1195 (1306)
....+.+|++|||||| +|||++|||||++||||+|+||||+++++||++||||||||+||+|++++.
T Consensus 435 ---~~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 435 ---FADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp ---EECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred ---hccCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 1345789999999999 799999999999999999999999999999999999999999999999876
No 19
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.7e-49 Score=487.93 Aligned_cols=436 Identities=16% Similarity=0.145 Sum_probs=297.4
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCCCCCCCC--CCcc-c-cCCCCCCCCccccCcc--------
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPC--TYPA-L-QTSPLDWQYKTEPNDR-------- 767 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~~~p~--~~~~-~-~~~~~~~~~~~~~~~~-------- 767 (1306)
..+||+||||+|.+|+++|.+|++ +|++|+|||+|..... ..|. .+.. . ....++|.+.++|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 457999999999999999999999 6999999999985431 1232 1211 1 2345789988887621
Q ss_pred -----ccccC----CCCeeecCCcceecchhHhccceeecCChhhHHHHHHcCCCCCCcccch-HHHHHhhhccCCCCCC
Q psy1043 768 -----ACLGL----NGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTL-PYFIKSESVNISSLVD 837 (1306)
Q Consensus 768 -----~~~~~----~~~~~~~~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~~~~~~e~~~~~~~~~ 837 (1306)
.+.++ .+..+.|++|++|||+|.+|++++.|+.+.||+.|. .+|.|++++ |||+++|+.......
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~- 160 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNI- 160 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCC-
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCC-
Confidence 11211 567889999999999999999999999999999996 478999999 999999997321100
Q ss_pred CCCCCCCCCcccccCCCCChHHHHHHHHHHHcCC-----CCC-CCCC---------CCccceeeccCCcCCCcccchhHh
Q psy1043 838 SPYHGTQGPLSVEEFRYYSPVTEAFVESAGELGY-----EVG-DING---------ERQTGFTRAHGTLKNGLRCSTAKA 902 (1306)
Q Consensus 838 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~-----~~~-~~~~---------~~~~g~~~~~~~~~~g~~~~~~~~ 902 (1306)
+..........+....+.++++++|+ +.. +.++ .....++.|..+|..| |.++..+
T Consensus 161 --------~~~~~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~ 231 (507)
T 1coy_A 161 --------DQAWFESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKT 231 (507)
T ss_dssp --------CHHHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTT
T ss_pred --------CCccccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHHH
Confidence 00000000024677889999999999 331 2211 1122445566678899 9999999
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe--CCe---eeeEEEEeCcEEEEcCCCcchHHHhcCcC---
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK--KGR---KDPVLVRARREVILSAGAIGSPQVYLIPN--- 974 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~--~G~---~~~~~v~A~k~VVLAAGai~sp~LLl~p~--- 974 (1306)
||.++.++.|++|++++.|++|+++++ .++++||++. +|. .+ +|+|+ +||||||+|+||+|||++.
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~---g~~~~gV~~~~~~g~~~~~~--~~~A~-~VIlaaGa~~sp~lL~~Sg~iG 305 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATG---SGYSVTMEQIDEQGNVVATK--VVTAD-RVFFAAGSVGTSKLLVSMKAQG 305 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSS---SSEEEEEEEECTTSCEEEEE--EEEEE-EEEECSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCC---CCEEEEEEEeCCCCcccccE--EEEeC-EEEEccCccCCHHHHHhcccCC
Confidence 998888888999999999999999851 2489999965 452 34 78997 6999999999999999854
Q ss_pred ------CCCcceEecCCCCCCCccee---ecc-ccccCCCCCcc--cc---ccCCCccccccccccccccCCcEEEEeee
Q psy1043 975 ------EHTHYQVDLTDGPEWPDIQL---FFA-SAADNDDGGLF--NK---RNNGLKDDYYAGVFEPILYRDSITLAPLL 1039 (1306)
Q Consensus 975 ------dh~~~~~~~~~~~~~p~~~~---~~~-~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1306)
||++..+..+ +.... .+. ........... .. .....+.......+.. .....+.++..+
T Consensus 306 ~lpnl~d~VG~~l~~h-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 379 (507)
T 1coy_A 306 HLPNLSSQVGEGWGNN-----GNIMVGRANHMWDATGSKQATIPTMGIDNWADPTAPIFAEIAPLPA-GLETYVSLYLAI 379 (507)
T ss_dssp SSTTSCTTTTCCBBCT-----TEEEEEEECCTTSCCCSCCCSSCCEEEECTTCTTSCEEEEEECCCC-SSCCCEEEEEEE
T ss_pred CCCccChhhCCccccC-----CcccccccccccccccccCCCcceEEEeccCCCCCCcEEEeccCCH-HHhhheeeeEEE
Confidence 4544432211 00000 000 00000000000 00 0000000000000000 001345556677
Q ss_pred cccCCCcEEEEccCCCCCCceeecCCCCCHHHHHHHHHHHH-HHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHH
Q psy1043 1040 LRPRSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAK-IGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWE 1118 (1306)
Q Consensus 1040 ~~p~s~g~v~l~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1118 (1306)
.+|.++|+|+|++.|+ .|+++|+.++ | ..+.++++ .+.+++++.+. +. ..+. +.+++ +
T Consensus 380 ~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~----~~~~-------~~~d~--~ 438 (507)
T 1coy_A 380 TKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IY----RTDL-------FGVYY--K 438 (507)
T ss_dssp ECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CB----CSSC-------C--CC--C
T ss_pred eeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cc----cCcc-------cccch--h
Confidence 8899999999988765 7999999999 8 45666666 78888766541 11 1110 01111 1
Q ss_pred HHHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHh
Q psy1043 1119 CQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKACDLIKEDW 1194 (1306)
Q Consensus 1119 ~~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ala~raAd~I~~~~ 1194 (1306)
++ ...+.+|++|||||| +|||++|||||++||||||+||||+++++||++||||||||+||+|+++.
T Consensus 439 ~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~ 505 (507)
T 1coy_A 439 TW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSD 505 (507)
T ss_dssp SS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHT
T ss_pred hh---cccccccccCCcchh------heECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 11 345789999999999 59999999999999999999999999999999999999999999999764
No 20
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=6.4e-49 Score=489.44 Aligned_cols=455 Identities=25% Similarity=0.370 Sum_probs=304.0
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCCCC--CCCCCCc-cccCCCCCC-C----CccccCccccccC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLS--DIPCTYP-ALQTSPLDW-Q----YKTEPNDRACLGL 772 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~--~~p~~~~-~~~~~~~~~-~----~~~~~~~~~~~~~ 772 (1306)
.+|||||||||++|+++|++|++ .|++|+|||+|+...... .....+. ......+++ . ....+... .
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~-~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~ 80 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPF----W 80 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCT----T
T ss_pred CceeEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCcc----c
Confidence 47999999999999999999999 499999999997532100 0000000 000000000 0 00000000 0
Q ss_pred CCCeeecCCcceecchhHhccceeecCChhhHHH---HHHcCCCCCCcccchHHHHHhhhccCCCCCCCCCCCCCCCccc
Q psy1043 773 NGRRSNWPRGKVIGGSSVLNAMLYVRGNRRDYDA---WEAAGNEGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSV 849 (1306)
Q Consensus 773 ~~~~~~~~~g~~lGG~S~~~~~~~~r~~~~d~~~---w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~g~~~~ 849 (1306)
......+.+|++|||+|.+|++.+.|+.+.||+. |. .+|+|++ +||++.+..... ...+...|+
T Consensus 81 ~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~~----~~~~~~~g~--- 147 (546)
T 1kdg_A 81 WCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLPS----TDHPSTDGQ--- 147 (546)
T ss_dssp BCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSCC----BSCCSTTSC---
T ss_pred cccccccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCCC----CccCCCCCC---
Confidence 0113567899999999999999999999999987 73 5787777 999999985211 111111221
Q ss_pred ccCCCCChHHHHHHHHHHHcCCCCCCCCC---CCccceeeccCCcCCCcccchhHhhhhhhhcCCCcEEEecceEEEEEe
Q psy1043 850 EEFRYYSPVTEAFVESAGELGYEVGDING---ERQTGFTRAHGTLKNGLRCSTAKAYLRPIIARPNLHVSLHSHAYRVHF 926 (1306)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~---~~~~g~~~~~~~~~~g~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I~~ 926 (1306)
.+..+....+.++++++|++..+.+. ....|+..+..++..|.|.++..+|+.++.++.|++|++++.|++|++
T Consensus 148 ---~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~ 224 (546)
T 1kdg_A 148 ---RYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVR 224 (546)
T ss_dssp ---CCSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEE
T ss_pred ---ccCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEE
Confidence 13356778888999999986543221 134466677777788899999999998888888999999999999999
Q ss_pred cCCCCCCceEEEEEEeC---CeeeeEEEEeCcEEEEcCCCcchHHHhcCcC----CCC---------cc-e------Eec
Q psy1043 927 EPGPDGQMRATGVVVKK---GRKDPVLVRARREVILSAGAIGSPQVYLIPN----EHT---------HY-Q------VDL 983 (1306)
Q Consensus 927 ~~~~~~~~rv~GV~~~~---G~~~~~~v~A~k~VVLAAGai~sp~LLl~p~----dh~---------~~-~------~~~ 983 (1306)
++ ++++||++.+ |+.+++++.+.++||||||+|+||+||+++. +|+ ++ . ..+
T Consensus 225 ~~-----~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dl 299 (546)
T 1kdg_A 225 NG-----SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINL 299 (546)
T ss_dssp ET-----TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCC
T ss_pred eC-----CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccC
Confidence 86 7999999754 6533235656677999999999999999843 111 00 0 000
Q ss_pred CCCCC---CCcceeecccccc----------------------CCCCCcc---------ccccCCCcc--cccccccc--
Q psy1043 984 TDGPE---WPDIQLFFASAAD----------------------NDDGGLF---------NKRNNGLKD--DYYAGVFE-- 1025 (1306)
Q Consensus 984 ~~~~~---~p~~~~~~~~~~~----------------------~~~~~~~---------~~~~~~~~~--~~~~~~~~-- 1025 (1306)
..+.. ++...+.+..... ....+++ ......... ..+...+.
T Consensus 300 pVG~nL~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (546)
T 1kdg_A 300 PVGMNAQDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASPKLNFWRAYSGSDGFTRYAQGTVRPG 379 (546)
T ss_dssp CTTTTBBCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSCCEEEEEEEECTTSCEEEEEEEEEES
T ss_pred CcccCcccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCcceEEEEccCCCCcchhhhhheeccc
Confidence 00000 1111111100000 0000000 000000000 00000000
Q ss_pred --------ccccCCcEEEEeeeccc-CCCcEEEEccCCCCCCceeecCCCCCHHHHHHHHHHHHHHHHHHhchhhhhccc
Q psy1043 1026 --------PILYRDSITLAPLLLRP-RSRGRIKLRTADPLDHPMIRPNYLYDEKDLKTLVEGAKIGYAITRTKAMKRFNP 1096 (1306)
Q Consensus 1026 --------~~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1306)
+......+.+...+++| .|+|+|+|++.| ..|.++.+|+.++.|++.+.++++.+.+++.+.+...
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~--- 454 (546)
T 1kdg_A 380 AASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLT--- 454 (546)
T ss_dssp CSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCE---
T ss_pred ccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCccc---
Confidence 00112345666677788 999999999887 4567888999999999999999999999876653211
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHhcccCcccccccccccCCCCCCCCccCCCCcEeccCCcEEecCCCCCCCCCcCcH
Q psy1043 1097 VLHNVTIPGCEHTTPLSDAYWECQVRHYTMTIYHPVGTCKMGPDSDPGAVVDPRLRVRGVAGLRVIDASIMPTIVSGNTN 1176 (1306)
Q Consensus 1097 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GtcrMG~~~~~~sVVD~~~rV~g~~nL~V~D~Sv~P~~~~~Np~ 1176 (1306)
...|++ ..+++.+.++++....+.+|++||||||++++. ||||++|||||++||||+|+||||+++++||+
T Consensus 455 ----~~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~-~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~ 525 (546)
T 1kdg_A 455 ----MITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQS-AVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQ 525 (546)
T ss_dssp ----EEESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTT-CSBCTTCBBTTCSSEEECSGGGCSSCCSSCSH
T ss_pred ----ccCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCCCC-eeECCCCeEccCCCcEEeEecccCCCCCccHH
Confidence 123432 236777778888777889999999999998766 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q psy1043 1177 APTIMIAEKACDLIKEDWG 1195 (1306)
Q Consensus 1177 lTi~ala~raAd~I~~~~~ 1195 (1306)
+||||||||+||+|+++++
T Consensus 526 ~ti~aiAeraAd~I~~~~~ 544 (546)
T 1kdg_A 526 GTLMSAAEQAAAKILALAG 544 (546)
T ss_dssp HHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 9999999999999998875
No 21
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=6.2e-45 Score=455.56 Aligned_cols=503 Identities=15% Similarity=0.147 Sum_probs=297.8
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCCCC------cchh-------hHHhhh----cC-------
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDIS------DVPV-------LAAYLQ----LS------- 131 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~~~------~~p~-------~~~~~~----~~------- 131 (1306)
+..+|||||||+|++|+++|..|++ .|++|+|||+++...... .... +..... ..
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~-~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~ 121 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTL 121 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHh-CCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhcccccccc
Confidence 4457999999999999999999999 799999999987543211 0000 000000 00
Q ss_pred ------CCCCccccccCcccccccCCCeee----ecCcccccCcccccceEEecCChhhHHHHHhcCCCCC---ChhhHH
Q psy1043 132 ------GLDWSYKTEPSSTSCLAMEHNRCN----WPRGKVVGGSSVLNYMLYVRGNRNDYNHWESLGNPGW---GAAEAL 198 (1306)
Q Consensus 132 ------~~~w~~~~~~~~~~~~~~~~~~~~----~~~g~~lGGsS~~n~~~~~r~~~~d~~~w~~~g~~~w---~~~~~~ 198 (1306)
...|..........+... ..... ...+..+||.+.+|.+...|..+.+ .+.. ..+| .+.++.
T Consensus 122 ~~~~~~~~~~~~~~v~l~~g~~~~-~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~~--l~~~~v~~~~~l~ 196 (623)
T 3pl8_A 122 VVDTLSPTSWQASTFFVRNGSNPE-QDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPLL--VKDDADADDAEWD 196 (623)
T ss_dssp CCCCSCTTSCCCSSCCSCTTCCTT-CCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCCS--STTCHHHHHHHHH
T ss_pred ccccccccccccCcEEeccCCCcc-cccchhhhhhcccccccCcceeeccccccCChHH--hhhh--hcccCccChhhHH
Confidence 001111000000000000 00011 1245678999999999998887753 1111 1122 346678
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCceeeecCCCccHH-HHHHHHHHHHcCCCCCCCCCCCccceeeecccccCCcccchh
Q psy1043 199 YYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPL-AEAFVRGGEELGYENRDINGEYQTGFMVAQGTVRNGARCSTS 277 (1306)
Q Consensus 199 ~y~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~g~r~s~~ 277 (1306)
++|...+........ .+.... .................+.. ... .... ......|+++.
T Consensus 197 ~~~~~~~~l~~vgg~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~-~p~--a~~~-~~~~~~r~s~~ 256 (623)
T 3pl8_A 197 RLYTKAESYFQTGTD----------------QFKESIRHNLVLNKLTEEYKGQRDFQQ-IPL--AATR-RSPTFVEWSSA 256 (623)
T ss_dssp HHHHHHHHHHTEESC----------------TTTTCHHHHHHHHHHHHHTTTTSCCEE-CCE--EEEE-EETTEEEECCH
T ss_pred HHHHHHHHhcccccc----------------cccCccccccchHHHHHhhhhcccccc-cch--hhcc-CCCCccccchH
Confidence 888877765422100 011111 11111111111110000000 000 0000 01123467777
Q ss_pred hhccccc------cCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHHHHhCCC
Q psy1043 278 KAFLQPV------KTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQILMLSGIG 349 (1306)
Q Consensus 278 ~~~l~~~------~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG 349 (1306)
.+++.++ .+++|++|++++.|++|++++++++++||++.+ +++..++.|+ +||||+|++.||+||++||||
T Consensus 257 ~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 257 NTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp HHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHHHTTTSS
T ss_pred HhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHHHhcCCC
Confidence 8888776 667899999999999999986555899999986 5777889996 799999999999999999999
Q ss_pred CcccccccCCCceeccc-cccccccccCCceEEEEecCCcccchhhhhhHHHHHhhhhcCCCCccccCCcc---------
Q psy1043 350 PKDHLTDMGIKTIQDLK-VGYNLQDHVGLGGFTFLINQPISLVQDRLESVQSVLNYAMMGNGPLTVMGGDR--------- 419 (1306)
Q Consensus 350 ~~~~L~~~gI~~~~dlp-VG~nL~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~--------- 419 (1306)
++.+|+.+||++ |+| ||+||+||+.... .+.++++.. ..+. .++.. ..|.++..
T Consensus 336 ~~~~l~~~~i~~--~l~~vG~nl~dh~~~~~-~~~~~~~~~---~~~~-----~~~~~-----~g~~g~~~~~~~~~~~~ 399 (623)
T 3pl8_A 336 QLGRPNPANPPE--LLPSLGSYITEQSLVFC-QTVMSTELI---DSVK-----SDMTI-----RGTPGELTYSVTYTPGA 399 (623)
T ss_dssp CCSSCCTTSCCS--SCTTTTBSCBCCCEEEE-EEEECHHHH---HHHT-----TTCEE-----ESCTTSTTCEEECCTTC
T ss_pred ccccccccCCCC--CCcccccchhhCcCceE-EEEECCccc---cccc-----ccccc-----cccCCCcceecccccCc
Confidence 999999999999 999 9999999976544 555554310 0000 00000 00111100
Q ss_pred -----hhhHH-HH-HHHHHcCCCCcccCCc-ceEEEEeecCCCCCCchhhHhhcCCchhhhhcccCC-cCCCCeE-EEEe
Q psy1043 420 -----LESVQ-SV-LNYAMMGNGPLTVMGG-VEGLAFVNTKYASDGGNQIRKAHGLREDFYDEVYGP-INNKDVW-SAIP 489 (1306)
Q Consensus 420 -----~~~~~-~~-~~~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 489 (1306)
.+.+. .+ ..|.....+++..... .+.. ...++....++..... + ..+....+.+ ......+ ..+.
T Consensus 400 p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 474 (623)
T 3pl8_A 400 STNKHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQ--VTTLFQPSHPWHTQIH-R--DAFSYGAVQQSIDSRLIVDWRFF 474 (623)
T ss_dssp TTCSSCHHHHHHHHHHHHHCTTCCCSSCTTCCCCE--EECCCBTTBCEEEEEE-C--CSCCCSCCCCSSCGGGEEEEEEE
T ss_pred ccccCCchhhhhhhhhhhccccccccccccccccc--ccccccccCcchhhhh-h--hhccccccccccccceEEEEEEE
Confidence 11121 12 2333333455432100 0000 1111111111100000 0 0000000000 0000011 1122
Q ss_pred ecCCcCceeEEEecc--CCCCCCCeeecCCCCChh-hHHHHHHHHHHHHHHHcCcchhhcccccccCCCCCCCCCCCCCH
Q psy1043 490 MLLRPRSRGRIKLRS--RNPLDYPRIQPEYFSDHH-DMLTLIEGVKIILELSKTRSFRQYESRFHNIPFPNCTHIPMYTD 566 (1306)
Q Consensus 490 ~l~~p~srg~v~l~~--~d~~~~p~i~~~y~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 566 (1306)
....|.++|+|+|++ +|+++.|.++++|..+++ |++.+.++++.+.++++..+...... .+. .
T Consensus 475 ~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~------~~~-----~--- 540 (623)
T 3pl8_A 475 GRTEPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGS------LPQ-----F--- 540 (623)
T ss_dssp ECCCCCTTCEEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTS------CSE-----E---
T ss_pred EeeccCCCCEEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCc------hhh-----c---
Confidence 345688889999976 899999999999999999 99999999999999988644322110 000 0
Q ss_pred HHHHHHHHhccCCCccccccccccCCCCCCCcc-CCCCceeccCCcEEeeccCCCCCCCccchHHHHHHHHHHHHHHHHh
Q psy1043 567 AYYECMIRHYSVTIYHPVGTCKMGPETDSEAVV-DPRLRVHGIGNLRVIDASIMPTIVSGNTNAPVIMIGEKGSDMIKQD 645 (1306)
Q Consensus 567 ~~~~~~~~~~~~t~~H~~GT~rMG~~~d~~sVV-D~~~rV~gv~NL~V~DaSv~Pt~~~~NP~lTi~alAeraAd~I~~~ 645 (1306)
....+++|++||||||.+++.+||| |++|||||++||||+|+||||+++++||++|+||||+|+||+|+++
T Consensus 541 --------~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~ 612 (623)
T 3pl8_A 541 --------MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQN 612 (623)
T ss_dssp --------CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred --------cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 0125678999999999883468997 9999999999999999999999999999999999999999999999
Q ss_pred Hhh
Q psy1043 646 WRK 648 (1306)
Q Consensus 646 ~~~ 648 (1306)
+++
T Consensus 613 ~~~ 615 (623)
T 3pl8_A 613 FTP 615 (623)
T ss_dssp CCC
T ss_pred hhc
Confidence 865
No 22
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=8.8e-36 Score=372.85 Aligned_cols=449 Identities=17% Similarity=0.141 Sum_probs=255.0
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCCCCCCCCCCccc------------------c-------
Q psy1043 698 EMYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPAL------------------Q------- 752 (1306)
Q Consensus 698 ~~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~~~p~~~~~~------------------~------- 752 (1306)
.|..+|||||||+|++|+++|+.|++ .|++|+|||+++.......-+.....+ .
T Consensus 42 ~~~~~~dvvIIG~G~aGl~aA~~l~~-~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~ 120 (623)
T 3pl8_A 42 GMDIKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNT 120 (623)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCC
T ss_pred cccccCCEEEECCcHHHHHHHHHHHh-CCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccc
Confidence 34457999999999999999999999 599999999987543211000000000 0
Q ss_pred -----CCCCCCCCccccCccccccCCCCeeec----CCcceecchhHhccceeecCChhhHHHHHHcCCCCC---Ccccc
Q psy1043 753 -----TSPLDWQYKTEPNDRACLGLNGRRSNW----PRGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGW---SYRDT 820 (1306)
Q Consensus 753 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w---~~~~l 820 (1306)
.....|......-...+. .....+.+ ..+..+||.+.+|.+...|..+.+ .+. ...+| .+.++
T Consensus 121 ~~~~~~~~~~~~~~~v~l~~g~~-~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~--~l~~~~v~~~~~l 195 (623)
T 3pl8_A 121 LVVDTLSPTSWQASTFFVRNGSN-PEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPL--LVKDDADADDAEW 195 (623)
T ss_dssp CCCCCSCTTSCCCSSCCSCTTCC-TTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCC--SSTTCHHHHHHHH
T ss_pred cccccccccccccCcEEeccCCC-cccccchhhhhhcccccccCcceeeccccccCChHH--hhh--hhcccCccChhhH
Confidence 000011000000000000 00000111 245677899999988888776642 010 01112 34567
Q ss_pred hHHHHHhhhccCCCCCCCCCCCCCCCcccccCCCCChHH-HHHHHHHHHcCCCCCCCCCCCccceeeccCCcCCCcccch
Q psy1043 821 LPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVT-EAFVESAGELGYEVGDINGERQTGFTRAHGTLKNGLRCST 899 (1306)
Q Consensus 821 ~~~~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 899 (1306)
.++|...+.+..... +. ...... ................+..... .... . .....++++
T Consensus 196 ~~~~~~~~~l~~vgg---------~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~p~-a~~~--~-~~~~~r~s~ 255 (623)
T 3pl8_A 196 DRLYTKAESYFQTGT---------DQ-------FKESIRHNLVLNKLTEEYKGQRDFQQIPL-AATR--R-SPTFVEWSS 255 (623)
T ss_dssp HHHHHHHHHHHTEES---------CT-------TTTCHHHHHHHHHHHHHTTTTSCCEECCE-EEEE--E-ETTEEEECC
T ss_pred HHHHHHHHHhccccc---------cc-------ccCccccccchHHHHHhhhhcccccccch-hhcc--C-CCCccccch
Confidence 788887776521100 00 111111 1111111111110000000000 0000 0 112235666
Q ss_pred hHhhhhhh------hcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe---CCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 900 AKAYLRPI------IARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK---KGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 900 ~~~~L~~~------~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~---~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
..++|.+. .++.|++|++++.|++|++++ +.++++||++. +|+.+ ++.|+ +||||+|++.+|+||
T Consensus 256 ~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~---~~~~v~GV~~~~~~~g~~~--~i~A~-~VIlaaG~~~s~~lL 329 (623)
T 3pl8_A 256 ANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNA---LNSEIESLHIHDLISGDRF--EIKAD-VYVLTAGAVHNTQLL 329 (623)
T ss_dssp HHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECT---TSSCEEEEEEEETTTCCEE--EECEE-EEEECSCTTHHHHHH
T ss_pred HHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEEC---CCCEEEEEEEEEcCCCcEE--EEECC-EEEEcCCCcCCHHHH
Confidence 77788766 566799999999999999985 22589999965 46655 78897 699999999999999
Q ss_pred cCcC------------------------CCCcc--eEecCCC------C-----CCCcceee---ccccccCCC------
Q psy1043 971 LIPN------------------------EHTHY--QVDLTDG------P-----EWPDIQLF---FASAADNDD------ 1004 (1306)
Q Consensus 971 l~p~------------------------dh~~~--~~~~~~~------~-----~~p~~~~~---~~~~~~~~~------ 1004 (1306)
+++. ||+.. .+.+... . +++.-..+ .........
T Consensus 330 ~~sgiG~~~~l~~~~i~~~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~ 409 (623)
T 3pl8_A 330 VNSGFGQLGRPNPANPPELLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWN 409 (623)
T ss_dssp HTTTSSCCSSCCTTSCCSSCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHH
T ss_pred HhcCCCccccccccCCCCCCcccccchhhCcCceEEEEECCcccccccccccccccCCCcceecccccCcccccCCchhh
Confidence 9832 33322 1111100 0 00000000 000000000
Q ss_pred -----------CCccccccCCC--------ccc--c----ccccccc------cccCCcE-EEEeeecccCCCcEEEEcc
Q psy1043 1005 -----------GGLFNKRNNGL--------KDD--Y----YAGVFEP------ILYRDSI-TLAPLLLRPRSRGRIKLRT 1052 (1306)
Q Consensus 1005 -----------~~~~~~~~~~~--------~~~--~----~~~~~~~------~~~~~~~-~~~~~~~~p~s~g~v~l~~ 1052 (1306)
..........+ ... + ....+.. +...-.. ........|.++|+|+|++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~ 489 (623)
T 3pl8_A 410 EKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSD 489 (623)
T ss_dssp HHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEE
T ss_pred hhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEEEECC
Confidence 00000000000 000 0 0000000 0000011 2234567899999999976
Q ss_pred --CCCCCCceeecCCCCCHH-HHHHHHHHHHHHHHHHhchhhhhcccccccccCCCCCCCCCCCHHHHHHHHhcccCccc
Q psy1043 1053 --ADPLDHPMIRPNYLYDEK-DLKTLVEGAKIGYAITRTKAMKRFNPVLHNVTIPGCEHTTPLSDAYWECQVRHYTMTIY 1129 (1306)
Q Consensus 1053 --~d~~~~p~i~~~y~~~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1129 (1306)
+|+++.|.++++|..++. |++.+.++++.+.+++...+....... +. . ....+++
T Consensus 490 ~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~------~~---~-------------~~~~~~~ 547 (623)
T 3pl8_A 490 KITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL------PQ---F-------------MEPGLVL 547 (623)
T ss_dssp EEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC------SE---E-------------CCTTTTC
T ss_pred CCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch------hh---c-------------cCCCCcc
Confidence 899999999999999999 999999999999999765443221110 00 0 0123678
Q ss_pred ccccccccCCC-CCCCCcc-CCCCcEeccCCcEEecCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy1043 1130 HPVGTCKMGPD-SDPGAVV-DPRLRVRGVAGLRVIDASIMPTIVSGNTNAPTIMIAEKACDLIKEDWGVMEGRE 1201 (1306)
Q Consensus 1130 H~~GtcrMG~~-~~~~sVV-D~~~rV~g~~nL~V~D~Sv~P~~~~~Np~lTi~ala~raAd~I~~~~~~~~~~~ 1201 (1306)
|++|||+||.+ +++ ||| |+++||||++||||+|+|+||+++++||++||||||+|+||+|+++++++...+
T Consensus 548 H~~gt~~mg~~~~~~-~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~~~~~ 620 (623)
T 3pl8_A 548 HLGGTHRMGFDEKED-NCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFTS 620 (623)
T ss_dssp CCBCTTCBCSSTTTT-TCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCCCC--
T ss_pred cCCCceeCCCCCCCC-eeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 99999999999 777 897 999999999999999999999999999999999999999999999998765443
No 23
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.46 E-value=2.9e-13 Score=166.50 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=50.2
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEE-eCCeeeeEEEEeCcEEEEcCCCcc-hHHHhc
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVV-KKGRKDPVLVRARREVILSAGAIG-SPQVYL 971 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~-~~G~~~~~~v~A~k~VVLAAGai~-sp~LLl 971 (1306)
....|...+++.|++|+++++|++|+.+++ ++|+||++ .+++.. +|+|+|.||||+|+|. ++.++.
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~----g~v~GV~~~~~g~~~--~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTDDT----GRVVGIVAKQYGKEV--AVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTT----CCEEEEEEEETTEEE--EEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEECCC----CcEEEEEEEECCcEE--EEEeCCeEEEeCCChhhCHHHHH
Confidence 344455566677999999999999999831 79999995 455555 7899655999999998 455543
No 24
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.39 E-value=5.5e-12 Score=155.12 Aligned_cols=64 Identities=16% Similarity=0.300 Sum_probs=51.2
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCC-cHHHHHH
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVN-SPQILML 345 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~-Sp~LLl~ 345 (1306)
|...+++.|++|++++.|++|+.++++ +++||++..+++..+|+|+|.||||+|++. ++.+|..
T Consensus 208 L~~~~~~~Gv~i~~~t~v~~L~~~~~g-~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 208 LVETAEKLGVRAEYDMRVQTLVTDDTG-RVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTTC-CEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHcCCEEEecCEeEEEEECCCC-cEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 333445568999999999999998433 899999988888888999756999999998 5655543
No 25
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.35 E-value=1e-11 Score=152.98 Aligned_cols=61 Identities=13% Similarity=0.098 Sum_probs=45.0
Q ss_pred hhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHhcC
Q psy1043 902 AYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLI 972 (1306)
Q Consensus 902 ~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LLl~ 972 (1306)
..|...+++.|++|+++++|++|+.++ ++++||++.+|+ ++.|+. ||++++...+.+.|+-
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~~-----~~~~gV~~~~g~----~~~ad~-VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETTG-----NKIEAVHLEDGR----RFLTQA-VASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEET-----TEEEEEEETTSC----EEECSC-EEECCC----------
T ss_pred HHHHHHHHHhCCceeeecceeEEEeeC-----CeEEEEEecCCc----EEEcCE-EEECCCHHHHHHHhcc
Confidence 335557778899999999999999998 899999999997 788987 9999998888776664
No 26
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.23 E-value=2.5e-11 Score=151.41 Aligned_cols=190 Identities=21% Similarity=0.206 Sum_probs=106.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCCCCCCCCCCccccCCCCCCCCccccCccccccCCCCeeecC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRSNWP 780 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1306)
.++||||||+|++|+++|+.|++ .|++|+||||.+.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~-~G~~V~vlEk~~~------------------------------------------- 160 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPV------------------------------------------- 160 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS-------------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCC-------------------------------------------
Confidence 36999999999999999999999 4999999999862
Q ss_pred CcceecchhHhccceeecCChhhHHHHHHcCCCCCCcccchHHHHHhhhccCCCCCCCCCCCCCCCcccccCCCCChHHH
Q psy1043 781 RGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTE 860 (1306)
Q Consensus 781 ~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 860 (1306)
+||.|...++.+......... ..+. .+....++....+... + ...+-.+. .......
T Consensus 161 ----~gg~s~~a~gg~~~~~~~~~~---~~g~----~ds~~~~~~~~~~~g~-------~--~~~~~~~~---~~~~~~~ 217 (571)
T 1y0p_A 161 ----IGGNAKLAAGGMNAAWTDQQK---AKKI----TDSPELMFEDTMKGGQ-------N--INDPALVK---VLSSHSK 217 (571)
T ss_dssp ----SCTTGGGCCSCEECSSCHHHH---HTTC----CCCHHHHHHHHHHHTT-------T--CSCHHHHH---HHHHHHH
T ss_pred ----CCCchhhcCceEEeCCCHHHH---HhCC----CCCHHHHHHHHHHhcC-------C--CCCHHHHH---HHHHccH
Confidence 244444444333222211111 1111 1223334433322100 0 00000000 0011233
Q ss_pred HHHHHHHHcCCCCCCCCCCCccceeeccCCcCCC--cccchhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEE
Q psy1043 861 AFVESAGELGYEVGDINGERQTGFTRAHGTLKNG--LRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938 (1306)
Q Consensus 861 ~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~G 938 (1306)
..++++.+.|+++..+. ...+..........+ .........|...+++.|++|+++++|++|+.+++ ++|+|
T Consensus 218 ~~~~~l~~~Gv~~~~~~--~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~----g~v~G 291 (571)
T 1y0p_A 218 DSVDWMTAMGADLTDVG--MMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK----GTVKG 291 (571)
T ss_dssp HHHHHHHHTTCCCCEEE--CCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT----SCEEE
T ss_pred HHHHHHHhcCCCCccCc--ccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC----CeEEE
Confidence 45566777888763210 001111111111111 11223344455566678999999999999998641 58999
Q ss_pred EEEe--CCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 939 VVVK--KGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 939 V~~~--~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
|++. +|+.. +|+|+. ||||+|++..
T Consensus 292 v~~~~~~g~~~--~i~a~~-VVlAtGg~~~ 318 (571)
T 1y0p_A 292 ILVKGMYKGYY--WVKADA-VILATGGFAK 318 (571)
T ss_dssp EEEEETTTEEE--EEECSE-EEECCCCCTT
T ss_pred EEEEeCCCcEE--EEECCe-EEEeCCCccc
Confidence 9865 67655 789987 9999999975
No 27
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.23 E-value=1.7e-11 Score=152.75 Aligned_cols=192 Identities=18% Similarity=0.187 Sum_probs=108.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCCCCCCCCCCccccCCCCCCCCccccCccccccCCCCeeecC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESPLSDIPCTYPALQTSPLDWQYKTEPNDRACLGLNGRRSNWP 780 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1306)
.+|||||||+|++|+++|+.|++. |++|+||||++
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~-G~~V~vlEk~~-------------------------------------------- 154 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAP-------------------------------------------- 154 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-TCCEEEECSSS--------------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC--------------------------------------------
Confidence 469999999999999999999994 99999999986
Q ss_pred CcceecchhHhccceeecCChhhHHHHHHcCCCCCCcccchHHHHHhhhccCCCCCCCCCCCCCCCcccccCCCCChHHH
Q psy1043 781 RGKVIGGSSVLNAMLYVRGNRRDYDAWEAAGNEGWSYRDTLPYFIKSESVNISSLVDSPYHGTQGPLSVEEFRYYSPVTE 860 (1306)
Q Consensus 781 ~g~~lGG~S~~~~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 860 (1306)
.+||.|...++.+........+. .+. .+....++....+.... ...+..+. .......
T Consensus 155 ---~~gg~s~~s~gg~~~~~~~~~~~---~g~----~ds~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~ 212 (566)
T 1qo8_A 155 ---FSGGNSMISAGGMNAVGTKQQTA---HGV----EDKVEWFIEDAMKGGRQ---------QNDIKLVT---ILAEQSA 212 (566)
T ss_dssp ---SSCTTGGGCCSCEECSSCHHHHH---TTC----CCCHHHHHHHHHHHTTT---------CSCHHHHH---HHHHHHH
T ss_pred ---CCCCcccccCceeEccCCHHHHH---hCC----CCCHHHHHHHHHHhcCC---------CCCHHHHH---HHHhccH
Confidence 22445555444443222221111 111 12333444333222100 00000000 0011234
Q ss_pred HHHHHHHHcCCCCCCCCCCCccceeeccCCcCCC--cccchhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEE
Q psy1043 861 AFVESAGELGYEVGDINGERQTGFTRAHGTLKNG--LRCSTAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATG 938 (1306)
Q Consensus 861 ~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~G 938 (1306)
..++++.+.|+++..+.. ..+..........+ .....+...|...+++.|++|+++++|++|+.+++ ++|+|
T Consensus 213 ~~i~~l~~~Gv~~~~~~~--~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~----g~v~G 286 (566)
T 1qo8_A 213 DGVQWLESLGANLDDLKR--SGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD----HSVVG 286 (566)
T ss_dssp HHHHHHHHTTCCCCEEEC--CTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT----SBEEE
T ss_pred HHHHHHHhcCCccccccc--cCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC----CcEEE
Confidence 456667778887632110 01111111111111 11223334455566677999999999999998641 58999
Q ss_pred EEEe--CCeeeeEEEEeCcEEEEcCCCcchHH
Q psy1043 939 VVVK--KGRKDPVLVRARREVILSAGAIGSPQ 968 (1306)
Q Consensus 939 V~~~--~G~~~~~~v~A~k~VVLAAGai~sp~ 968 (1306)
|++. +|+.. +|+|+. ||||+|++...+
T Consensus 287 v~~~~~~g~~~--~i~A~~-VVlAtGg~s~~~ 315 (566)
T 1qo8_A 287 AVVHGKHTGYY--MIGAKS-VVLATGGYGMNK 315 (566)
T ss_dssp EEEEETTTEEE--EEEEEE-EEECCCCCTTCH
T ss_pred EEEEeCCCcEE--EEEcCE-EEEecCCcccCH
Confidence 9965 67655 788965 999999998643
No 28
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.15 E-value=2e-10 Score=143.89 Aligned_cols=55 Identities=15% Similarity=0.182 Sum_probs=44.4
Q ss_pred hhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEE---eCCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 904 LRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVV---KKGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 904 L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~---~~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
|...+.+.|++|++++.|++|+.++ ++|+||.+ .+|+.. .|+|+. ||||+|+++.
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~-----g~v~Gv~~~~~~~G~~~--~i~A~~-VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQD-----GKCYGAVVRDLVTGDII--AYVAKG-TLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEET-----TEEEEEEEEETTTCCEE--EEECSE-EEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecC-----CEEEEEEEEECCCCcEE--EEEcCE-EEEccCcchh
Confidence 4445556799999999999999876 79999985 356655 788975 9999999875
No 29
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.13 E-value=3.6e-10 Score=140.58 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=45.7
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe---CCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK---KGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~---~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
.|...+.+.|++|++++.|++|+.++ ++|.||.+. +|+.. .|+|+. ||||+|+++.
T Consensus 160 ~L~~~~~~~gv~i~~~~~v~~Li~~~-----g~v~Gv~~~~~~~G~~~--~i~A~~-VVlATGG~~~ 218 (621)
T 2h88_A 160 TLYGRSLRYDTSYFVEYFALDLLMEN-----GECRGVIALCIEDGTIH--RFRAKN-TVIATGGYGR 218 (621)
T ss_dssp HHHHHHTTSCCEEEETEEEEEEEEET-----TEEEEEEEEETTTCCEE--EEEEEE-EEECCCCCGG
T ss_pred HHHHHHHhCCCEEEEceEEEEEEEEC-----CEEEEEEEEEcCCCcEE--EEEcCe-EEECCCcccc
Confidence 34456667899999999999999876 799999853 56655 788975 9999999875
No 30
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.13 E-value=3.6e-11 Score=141.44 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=45.9
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHhc
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYL 971 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LLl 971 (1306)
.|...+++.|++|+++++|++|..++ +.++.|.+.+|+.. +++|+. ||+|+|++ |.+|+-
T Consensus 155 ~l~~~~~~~Gv~i~~~~~v~~i~~~~-----~~~~~v~~~~g~~~--~~~a~~-VV~A~G~~-s~~l~~ 214 (369)
T 3dme_A 155 AYQGDAESDGAQLVFHTPLIAGRVRP-----EGGFELDFGGAEPM--TLSCRV-LINAAGLH-APGLAR 214 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECT-----TSSEEEEECTTSCE--EEEEEE-EEECCGGG-HHHHHH
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcC-----CceEEEEECCCcee--EEEeCE-EEECCCcc-hHHHHH
Confidence 34456677899999999999999876 33345778888555 788987 99999987 666653
No 31
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.11 E-value=4.4e-10 Score=140.11 Aligned_cols=61 Identities=20% Similarity=0.253 Sum_probs=47.9
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-CCeEEEEEEcceEEEccCCCCc-HHHH
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-NHQRHVIRARKEVILSGGAVNS-PQIL 343 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-~g~~~~v~A~k~VVLaAGai~S-p~LL 343 (1306)
|...+++.|++|+++++|++|+.++++ +++||++.. +++..++.|+. ||||+|++.. +.++
T Consensus 261 L~~~~~~~gv~i~~~~~v~~l~~~~~g-~v~Gv~~~~~~g~~~~i~a~~-VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 261 LYDNAVKRNIDLRMNTRGIEVLKDDKG-TVKGILVKGMYKGYYWVKADA-VILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEECTTS-CEEEEEEEETTTEEEEEECSE-EEECCCCCTTCHHHH
T ss_pred HHHHHHhcCCEEEeCCEeeEeEEcCCC-eEEEEEEEeCCCcEEEEECCe-EEEeCCCcccCHHHH
Confidence 333445678999999999999987622 899999886 67777899977 9999999875 4433
No 32
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.11 E-value=4.6e-10 Score=139.59 Aligned_cols=56 Identities=16% Similarity=0.149 Sum_probs=44.2
Q ss_pred hhhhhhcCCCcEEEecceEEEEEec-CCCCCCceEEEEEE---eCCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFE-PGPDGQMRATGVVV---KKGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~-~~~~~~~rv~GV~~---~~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
.|...+.+.|++|++++.|++|+.+ + ++++||.+ .+|+.. .|+|+. ||||+|+++.
T Consensus 148 ~L~~~~~~~gv~i~~~~~v~~L~~~~~-----g~v~Gv~~~~~~~g~~~--~i~A~~-VVlAtGg~~~ 207 (588)
T 2wdq_A 148 TLYQQNLKNHTTIFSEWYALDLVKNQD-----GAVVGCTALCIETGEVV--YFKARA-TVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEECTT-----SCEEEEEEEETTTCCEE--EEEEEE-EEECCCCCGG
T ss_pred HHHHHHHhCCCEEEeCcEEEEEEECCC-----CEEEEEEEEEcCCCeEE--EEEcCE-EEECCCCCcc
Confidence 3444555679999999999999986 4 68999985 356555 788975 9999999865
No 33
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.09 E-value=4.3e-10 Score=139.98 Aligned_cols=59 Identities=17% Similarity=0.297 Sum_probs=46.5
Q ss_pred cccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-CCeEEEEEEcceEEEccCCCCcHHHH
Q psy1043 283 PVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-NHQRHVIRARKEVILSGGAVNSPQIL 343 (1306)
Q Consensus 283 ~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-~g~~~~v~A~k~VVLaAGai~Sp~LL 343 (1306)
..+++.|++|++++.|++|+.++++ +++||++.. +++..++.|+ .||||+|++...+-|
T Consensus 258 ~~~~~~gv~i~~~~~v~~l~~~~~g-~v~Gv~~~~~~g~~~~i~A~-~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 258 KAAKEQGIDTRLNSRVVKLVVNDDH-SVVGAVVHGKHTGYYMIGAK-SVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHHHTTCCEECSEEEEEEEECTTS-BEEEEEEEETTTEEEEEEEE-EEEECCCCCTTCHHH
T ss_pred HHHHhcCCEEEeCCEEEEEEECCCC-cEEEEEEEeCCCcEEEEEcC-EEEEecCCcccCHHH
Confidence 3445568999999999999988622 899999875 6766789995 499999999864333
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.07 E-value=4e-10 Score=133.35 Aligned_cols=56 Identities=13% Similarity=0.094 Sum_probs=44.5
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.|...+++.|++|+++++|++|..++ +++++|++.+| +++|+. ||+|+|++ ++.|+
T Consensus 154 ~l~~~~~~~Gv~i~~~~~v~~i~~~~-----~~v~gv~~~~g-----~i~a~~-VV~A~G~~-s~~l~ 209 (382)
T 1y56_B 154 AFAVKAKEYGAKLLEYTEVKGFLIEN-----NEIKGVKTNKG-----IIKTGI-VVNATNAW-ANLIN 209 (382)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS-----SBEEEEEETTE-----EEECSE-EEECCGGG-HHHHH
T ss_pred HHHHHHHHCCCEEECCceEEEEEEEC-----CEEEEEEECCc-----EEECCE-EEECcchh-HHHHH
Confidence 34456667899999999999999876 67888887666 678987 99999987 44443
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.06 E-value=2.1e-10 Score=138.45 Aligned_cols=57 Identities=25% Similarity=0.292 Sum_probs=47.5
Q ss_pred hhhhhhcCCCcEEEecc---eEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 903 YLRPIIARPNLHVSLHS---HAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~---~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.|...+++.|++|++++ +|++|..++ ++++||++.+|+ +++|+. ||+|+|++ |++|+
T Consensus 166 ~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-----~~v~gV~t~~G~----~i~Ad~-VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 166 AAAREAQRMGVKFVTGTPQGRVVTLIFEN-----NDVKGAVTADGK----IWRAER-TFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHHHHTTCEEEESTTTTCEEEEEEET-----TEEEEEEETTTE----EEECSE-EEECCGGG-GGGTS
T ss_pred HHHHHHHhcCCEEEeCCcCceEEEEEecC-----CeEEEEEECCCC----EEECCE-EEECCCCC-hhhhc
Confidence 45456677899999999 999999887 789999998886 688987 99999997 55554
No 36
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.05 E-value=6.7e-10 Score=136.82 Aligned_cols=60 Identities=23% Similarity=0.283 Sum_probs=42.9
Q ss_pred hhhhhcC-CCcEEEecceEEEEEecCCC--CCCceEEEEEEe---CCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 904 LRPIIAR-PNLHVSLHSHAYRVHFEPGP--DGQMRATGVVVK---KGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 904 L~~~~~~-~g~~i~~~~~V~~I~~~~~~--~~~~rv~GV~~~---~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
|...+++ .|++|++++.|++|+.++++ ...+++.||.+. +|+.. .|.|+. ||||+|++..
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~--~i~A~~-VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVE--TCHAKA-VVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEE--EEECSE-EEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEE--EEEcCe-EEECCCCccc
Confidence 3334444 79999999999999984210 001289999954 57655 788975 9999999864
No 37
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.04 E-value=4.4e-10 Score=139.82 Aligned_cols=64 Identities=20% Similarity=0.276 Sum_probs=47.8
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe--CCeeeeEEEEeCcEEEEcCCCcch-HHHh
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK--KGRKDPVLVRARREVILSAGAIGS-PQVY 970 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~--~G~~~~~~v~A~k~VVLAAGai~s-p~LL 970 (1306)
....|...+++.|++|+++++|++|+.+++ ++|+||++. +|+.. +|.|+. ||||+|++.. +.++
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~----g~v~GV~~~~~~G~~~--~i~A~~-VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDAS----GKVTGVLVKGEYTGYY--VIKADA-VVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC------CCEEEEEEEETTTEEE--EEECSE-EEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCC----CeEEEEEEEeCCCcEE--EEEcCE-EEEeCCCCccCHHHH
Confidence 334455566677999999999999987641 589999965 67655 788965 9999999974 4443
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.03 E-value=7.5e-10 Score=130.85 Aligned_cols=55 Identities=20% Similarity=0.055 Sum_probs=42.5
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.|...+++.|++|+++++|++|..++ ++ ++|++.+| +++|++ ||+|+|++ |+.|+
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~-----~~-~~V~t~~g-----~i~a~~-VV~A~G~~-s~~l~ 213 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVD-----GA-WEVRCDAG-----SYRAAV-LVNAAGAW-CDAIA 213 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEET-----TE-EEEECSSE-----EEEESE-EEECCGGG-HHHHH
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeC-----Ce-EEEEeCCC-----EEEcCE-EEECCChh-HHHHH
Confidence 34456667899999999999999876 44 56776666 678987 99999986 45554
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.00 E-value=6.3e-10 Score=141.67 Aligned_cols=55 Identities=7% Similarity=-0.001 Sum_probs=42.7
Q ss_pred hhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 904 LRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 904 L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
|...+++.|++|+++++|++|..++ +++ +|++.+|. ++.|+. ||+|+|++ ++.|+
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~~-----~~v-~V~t~~G~----~i~Ad~-VVlAtG~~-s~~l~ 477 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRKD-----DCW-LLNFAGDQ----QATHSV-VVLANGHQ-ISRFS 477 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEET-----TEE-EEEETTSC----EEEESE-EEECCGGG-GGCST
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEeC-----CeE-EEEECCCC----EEECCE-EEECCCcc-hhccc
Confidence 4445667799999999999999887 453 67777765 688987 99999987 55443
No 40
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.00 E-value=6.8e-10 Score=138.98 Aligned_cols=58 Identities=9% Similarity=0.165 Sum_probs=43.5
Q ss_pred hhhhhcCC--CcEEEecceEEEEEecCCCCCCceEEEEEE---eCCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 904 LRPIIARP--NLHVSLHSHAYRVHFEPGPDGQMRATGVVV---KKGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 904 L~~~~~~~--g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~---~~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
|...+++. |++|+.++.|++|+.+++ ..++|+||.. .+|+.. .|+|+. ||||+|+++.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~--~~g~v~Gv~~~~~~~g~~~--~i~Ak~-VVLATGG~g~ 234 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKN--TPNRIAGAVGFNLRANEVH--IFKANA-MVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSS--STTBEEEEEEEESSSSCEE--EEECSE-EEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCC--ccceEEEEEEEEcCCCcEE--EEEeCE-EEECCCcccc
Confidence 43444444 999999999999999861 1139999984 356655 789975 9999999874
No 41
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.99 E-value=6e-10 Score=132.96 Aligned_cols=56 Identities=14% Similarity=0.152 Sum_probs=43.8
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.|...+++.|++|+++++|++|..++ +++++|.+.+| +++|+. ||+|+|++ ++.|+
T Consensus 179 ~l~~~~~~~g~~i~~~~~v~~i~~~~-----~~~~~v~~~~g-----~~~a~~-vV~a~G~~-s~~l~ 234 (405)
T 2gag_B 179 AFARKANEMGVDIIQNCEVTGFIKDG-----EKVTGVKTTRG-----TIHAGK-VALAGAGH-SSVLA 234 (405)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS-----SBEEEEEETTC-----CEEEEE-EEECCGGG-HHHHH
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEeC-----CEEEEEEeCCc-----eEECCE-EEECCchh-HHHHH
Confidence 34455667899999999999999876 67888888777 567876 99999986 34443
No 42
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.98 E-value=2.1e-09 Score=134.03 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=44.9
Q ss_pred hhhhhhcCCC-cEEEecceEEEEEecCCCCCCceEEEEEE---eCCeeeeEEEEeCcEEEEcCCCcchH
Q psy1043 903 YLRPIIARPN-LHVSLHSHAYRVHFEPGPDGQMRATGVVV---KKGRKDPVLVRARREVILSAGAIGSP 967 (1306)
Q Consensus 903 ~L~~~~~~~g-~~i~~~~~V~~I~~~~~~~~~~rv~GV~~---~~G~~~~~~v~A~k~VVLAAGai~sp 967 (1306)
.|...+.+.| ++|++++.|++|+.++ ++++||.+ .+|+.. .|+|+. ||+|+|+++..
T Consensus 139 ~L~~~~~~~gnv~i~~~~~v~~l~~~~-----g~v~Gv~~~~~~~G~~~--~i~A~~-VVlAtGg~s~~ 199 (602)
T 1kf6_A 139 TLFQTSLQFPQIQRFDEHFVLDILVDD-----GHVRGLVAMNMMEGTLV--QIRANA-VVMATGGAGRV 199 (602)
T ss_dssp HHHHHHTTCTTEEEEETEEEEEEEEET-----TEEEEEEEEETTTTEEE--EEECSC-EEECCCCCGGG
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEEEeC-----CEEEEEEEEEcCCCcEE--EEEcCe-EEECCCCCccc
Confidence 3444555556 9999999999999886 78999974 467655 789987 99999998754
No 43
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.97 E-value=3.2e-09 Score=132.98 Aligned_cols=52 Identities=8% Similarity=0.070 Sum_probs=42.9
Q ss_pred cCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCc
Q psy1043 285 KTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 285 ~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~S 339 (1306)
+.+.|++|++++.|++|+.+++ +++||.+.+ ++....+.|+. ||||+|++..
T Consensus 168 a~~~gv~i~~~~~v~~L~~~~g--~v~Gv~~~~~~~G~~~~i~A~~-VVlATGG~~~ 221 (660)
T 2bs2_A 168 CLKLGVSIQDRKEAIALIHQDG--KCYGAVVRDLVTGDIIAYVAKG-TLIATGGYGR 221 (660)
T ss_dssp HHHHTCEEECSEEEEEEEEETT--EEEEEEEEETTTCCEEEEECSE-EEECCCCCGG
T ss_pred HHhCCCEEEECcEEEEEEecCC--EEEEEEEEECCCCcEEEEEcCE-EEEccCcchh
Confidence 3456899999999999998765 899998864 56667789975 9999999864
No 44
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.96 E-value=6.3e-09 Score=129.44 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=44.2
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCc
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~S 339 (1306)
.+.+.|++|++++.|++|+.+++ ++.||.+.. +++...+.|+. ||||+|++..
T Consensus 164 ~~~~~gv~i~~~~~v~~Li~~~g--~v~Gv~~~~~~~G~~~~i~A~~-VVlATGG~~~ 218 (621)
T 2h88_A 164 RSLRYDTSYFVEYFALDLLMENG--ECRGVIALCIEDGTIHRFRAKN-TVIATGGYGR 218 (621)
T ss_dssp HHTTSCCEEEETEEEEEEEEETT--EEEEEEEEETTTCCEEEEEEEE-EEECCCCCGG
T ss_pred HHHhCCCEEEEceEEEEEEEECC--EEEEEEEEEcCCCcEEEEEcCe-EEECCCcccc
Confidence 44568999999999999998765 899999874 56667899965 9999999864
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.94 E-value=2.3e-09 Score=127.56 Aligned_cols=35 Identities=43% Similarity=0.722 Sum_probs=32.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|++|++ .|++|+||||+.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~-~G~~V~vlE~~~ 37 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAE-RGHRVLVLERHT 37 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 46999999999999999999999 599999999986
No 46
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.93 E-value=5.6e-09 Score=129.84 Aligned_cols=54 Identities=11% Similarity=0.146 Sum_probs=42.6
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCc
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~S 339 (1306)
.+.+.|++|++++.|++|+.++++ +++||.+.+ +++...+.|+. ||||+|++..
T Consensus 152 ~~~~~gv~i~~~~~v~~L~~~~~g-~v~Gv~~~~~~~g~~~~i~A~~-VVlAtGg~~~ 207 (588)
T 2wdq_A 152 QNLKNHTTIFSEWYALDLVKNQDG-AVVGCTALCIETGEVVYFKARA-TVLATGGAGR 207 (588)
T ss_dssp HHHHTTCEEEETEEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEE-EEECCCCCGG
T ss_pred HHHhCCCEEEeCcEEEEEEECCCC-EEEEEEEEEcCCCeEEEEEcCE-EEECCCCCcc
Confidence 334569999999999999986332 899999864 56667889964 9999999754
No 47
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.92 E-value=5.1e-09 Score=131.72 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=44.5
Q ss_pred hhhhhhhcCC-Cc-EEEecceEEEEEecCCCCCCceEEEEEE---eCCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 902 AYLRPIIARP-NL-HVSLHSHAYRVHFEPGPDGQMRATGVVV---KKGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 902 ~~L~~~~~~~-g~-~i~~~~~V~~I~~~~~~~~~~rv~GV~~---~~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
..|...+++. |+ +|++++.|++|+.+++ ..++|+||.. .+|+.. .|+|+. ||||+|+++.
T Consensus 155 ~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~--~~g~v~Gv~~~~~~~g~~~--~i~A~~-VVlAtGG~~~ 219 (643)
T 1jnr_A 155 PIIAEAAKMAVGEENIYERVFIFELLKDNN--DPNAVAGAVGFSVREPKFY--VFKAKA-VILATGGATL 219 (643)
T ss_dssp HHHHHHHHHHHCGGGEECSEEEEEEEECTT--CTTBEEEEEEEESSSSCEE--EEECSE-EEECCCCBCS
T ss_pred HHHHHHHHhcCCCcEEEecCEEEEEEEcCC--ccceeEEEEEEEecCCcEE--EEEcCE-EEECCCcccc
Confidence 3444455555 89 9999999999998761 0128999984 456655 788965 9999999875
No 48
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.92 E-value=8.1e-09 Score=128.38 Aligned_cols=63 Identities=22% Similarity=0.263 Sum_probs=47.3
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-CCeEEEEEEcceEEEccCCCCc-HHHHHH
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-NHQRHVIRARKEVILSGGAVNS-PQILML 345 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-~g~~~~v~A~k~VVLaAGai~S-p~LLl~ 345 (1306)
|...+++.|++|++++.|++|+.++++ +++||++.. +++..++.|+. ||||+|++.. +.++..
T Consensus 261 L~~~~~~~gv~i~~~t~v~~l~~~~~g-~v~GV~~~~~~G~~~~i~A~~-VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 261 LWDNAVKRGTDIRLNSRVVRILEDASG-KVTGVLVKGEYTGYYVIKADA-VVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEC--C-CEEEEEEEETTTEEEEEECSE-EEECCCCCTTCHHHHHH
T ss_pred HHHHHHHcCCeEEecCEEEEEEECCCC-eEEEEEEEeCCCcEEEEEcCE-EEEeCCCCccCHHHHHH
Confidence 333445568999999999999987622 899999875 67677899955 9999999874 555543
No 49
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.92 E-value=4e-09 Score=127.28 Aligned_cols=58 Identities=14% Similarity=0.326 Sum_probs=46.9
Q ss_pred HhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHH
Q psy1043 901 KAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQ 968 (1306)
Q Consensus 901 ~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~ 968 (1306)
...|...+++.|++|+++++|++|..++ +++++|.+.+|+ +++|+. ||+|+|++..|.
T Consensus 137 ~~~L~~~~~~~GV~i~~~~~V~~i~~~~-----~~v~~V~~~~G~----~i~Ad~-VVlAtGg~s~~~ 194 (447)
T 2i0z_A 137 VDALLTRLKDLGVKIRTNTPVETIEYEN-----GQTKAVILQTGE----VLETNH-VVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEET-----TEEEEEEETTCC----EEECSC-EEECCCCSSSGG
T ss_pred HHHHHHHHHHCCCEEEeCcEEEEEEecC-----CcEEEEEECCCC----EEECCE-EEECCCCCcCCC
Confidence 3345456667899999999999999876 688899988874 688987 999999987653
No 50
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.91 E-value=4.1e-09 Score=134.23 Aligned_cols=99 Identities=16% Similarity=0.034 Sum_probs=59.7
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHhHhhhhhccccccccccccCCCchHHHHHHHHHHhhCCCcccccCCC---------
Q psy1043 621 TIVSGNTNAPVIMIGEKGSDMIKQDWRKYIYSSFSTARIAMSYGPSIGFILLFRYMISQYRPDVEDLEHLI--------- 691 (1306)
Q Consensus 621 t~~~~NP~lTi~alAeraAd~I~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--------- 691 (1306)
.+|+.||.+-...+-..++..+ +. ..++++.+....++.++.+++.++...+...
T Consensus 180 f~p~~np~~w~~~~~~~l~~~~----~~------------g~~~~t~~~~~~vr~~l~~aGf~~~~~~~~~~k~~~~~~~ 243 (689)
T 3pvc_A 180 FAPAKNPDMWNEQLFNAMARMT----RP------------GGTFSTFTAAGFVRRGLQQAGFNVTKVKGFGQKREMLTGT 243 (689)
T ss_dssp SCC--CCTTCSHHHHHHHHHHE----EE------------EEEEEESCCCHHHHHHHHHTTCEEEEEECSSSSCEEEEEE
T ss_pred CCCCCChhhhhHHHHHHHHHHh----CC------------CCEEEeccCcHHHHHHHHhCCeEEEeccCCCccccccccc
Confidence 6788899765444332222211 10 1233333444578888888877655422100
Q ss_pred -----CC-----CCcCCCCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 692 -----PD-----VPLEEMYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 692 -----~~-----~~~~~~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.. ........++||||||||++|+++|++|++ .|++|+||||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~ 297 (689)
T 3pvc_A 244 LPQQIHAPTAPWYHRPAATRCDDIAIIGGGIVSALTALALQR-RGAVVTLYCADA 297 (689)
T ss_dssp CCSCCCCCCCGGGCCCCCSCCSSEEEECCSHHHHHHHHHHHT-TTCCEEEEESSS
T ss_pred cccccccccCCCccCcccCCCCCEEEECCcHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 00 000111246999999999999999999999 599999999975
No 51
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.90 E-value=1.3e-09 Score=128.18 Aligned_cols=60 Identities=15% Similarity=0.268 Sum_probs=44.4
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHh-CC
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLS-GI 348 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~S-Gi 348 (1306)
.+++.|++|+++++|++|..+++ .+..|.. .+++..++.|+. ||+|+|+. |+.|+... |+
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~--~~~~v~~-~~g~~~~~~a~~-VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 159 DAESDGAQLVFHTPLIAGRVRPE--GGFELDF-GGAEPMTLSCRV-LINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHHHTTCEEECSCCEEEEEECTT--SSEEEEE-CTTSCEEEEEEE-EEECCGGG-HHHHHHTEETS
T ss_pred HHHHCCCEEECCCEEEEEEEcCC--ceEEEEE-CCCceeEEEeCE-EEECCCcc-hHHHHHHhcCC
Confidence 44567899999999999998765 3233543 345445789976 99999974 88888776 65
No 52
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.90 E-value=2e-09 Score=127.23 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=43.3
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
.+++.|++|+++++|++|..+++ +++||+. .++ .+.|+. ||+|+|+. |+.|+...|+
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~~~~--~v~gv~~-~~g---~i~a~~-VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLIENN--EIKGVKT-NKG---IIKTGI-VVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS--BEEEEEE-TTE---EEECSE-EEECCGGG-HHHHHHHHTC
T ss_pred HHHHCCCEEECCceEEEEEEECC--EEEEEEE-CCc---EEECCE-EEECcchh-HHHHHHHcCC
Confidence 44567899999999999998765 7777765 222 588976 99999974 6677666654
No 53
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.89 E-value=1.1e-08 Score=125.82 Aligned_cols=52 Identities=17% Similarity=0.353 Sum_probs=41.7
Q ss_pred CCCeEEEeccEEEEEEecCCC-----CeEEEEEEEe--CCeEEEEEEcceEEEccCCCCc
Q psy1043 287 RPNLHISLHSHVTKVLIDPKN-----RMAIGVEFVK--NHQRHVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 287 ~~nl~I~~~~~V~~I~~d~~~-----~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~S 339 (1306)
..|++|++++.|++|+.++++ +++.||.+.+ +++..++.|+. ||||+|++..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~-VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKA-VVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSE-EEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCe-EEECCCCccc
Confidence 479999999999999984322 2789999875 67777889965 9999998753
No 54
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.88 E-value=3.4e-09 Score=138.03 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=45.1
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.|...+++.|++|+++++|++|..++ +++++|.+.+| +|+|+. ||+|+|++ ++.|+
T Consensus 156 ~L~~~a~~~Gv~i~~~t~V~~i~~~~-----~~v~~V~t~~G-----~i~Ad~-VV~AaG~~-s~~l~ 211 (830)
T 1pj5_A 156 LLIKRTESAGVTYRGSTTVTGIEQSG-----GRVTGVQTADG-----VIPADI-VVSCAGFW-GAKIG 211 (830)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET-----TEEEEEEETTE-----EEECSE-EEECCGGG-HHHHH
T ss_pred HHHHHHHHcCCEEECCceEEEEEEeC-----CEEEEEEECCc-----EEECCE-EEECCccc-hHHHH
Confidence 34456667899999999999999876 67888888776 678987 99999997 45554
No 55
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.87 E-value=1.5e-09 Score=128.33 Aligned_cols=37 Identities=38% Similarity=0.634 Sum_probs=33.8
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
...+|||||||+|++|+++|++|++ .|++|+|||++.
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~-~G~~V~llE~~~ 50 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESGT 50 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 3457999999999999999999999 599999999985
No 56
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.87 E-value=1.3e-08 Score=120.62 Aligned_cols=34 Identities=35% Similarity=0.592 Sum_probs=32.3
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|++|++ .|++|+|||++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-~G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 6999999999999999999999 499999999986
No 57
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.86 E-value=1.3e-08 Score=120.17 Aligned_cols=196 Identities=17% Similarity=0.148 Sum_probs=106.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCCCCcchhhHHhhhcCCCCCccccccCcccccccCCCeeeec
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETDISDVPVLAAYLQLSGLDWSYKTEPSSTSCLAMEHNRCNWP 157 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 157 (1306)
.++||||||+|.+|+++|++|++ |++|+|||+++...
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~--G~~V~vlE~~~~~g----------------------------------------- 44 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA--HGRVVVLEREAQPG----------------------------------------- 44 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSSSTT-----------------------------------------
T ss_pred CcCCEEEECCcHHHHHHHHHHhC--CCCEEEEECCCCcc-----------------------------------------
Confidence 47999999999999999999994 99999999985211
Q ss_pred CcccccCcccccceEEecC-ChhhHHHHHhcCCCCCChhhHHHHHHHhccCCCCCCCCCCCCCCCCceeeecCCCccHHH
Q psy1043 158 RGKVVGGSSVLNYMLYVRG-NRNDYNHWESLGNPGWGAAEALYYFKKSEDNRNQYLAETPYHNSGGYLTVQEAPWHTPLA 236 (1306)
Q Consensus 158 ~g~~lGGsS~~n~~~~~r~-~~~d~~~w~~~g~~~w~~~~~~~y~~~~e~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 236 (1306)
+|+|..+++++... ....+..+.. ....+|++.+... .........|.+.+.... .....
T Consensus 45 -----~~as~~~~g~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~----~~~~~~~~~g~l~~~~~~-~~~~~ 105 (381)
T 3nyc_A 45 -----YHSTGRSAAHYTVAYGTPQVRALTA---------ASRAFFDNPPAGF----CEHPLLSPRPEMVVDFSD-DPEEL 105 (381)
T ss_dssp -----SSGGGSCCCEECSSSSCHHHHHHHH---------HHHHHHHSCCTTS----CSSCSEEECCEEEECSSC-CHHHH
T ss_pred -----ccccccccceeecccCCHHHHHHHH---------HHHHHHHHhhhhh----CCcccccccceEEEechH-HHHHH
Confidence 24444444444321 1122222211 1222333322211 111222334555554432 23344
Q ss_pred HHHHHHHHHcCCCCCCCC------------CCCccceeeecccccCCcccc--hhhhccccccCCCCeEEEeccEEEEEE
Q psy1043 237 EAFVRGGEELGYENRDIN------------GEYQTGFMVAQGTVRNGARCS--TSKAFLQPVKTRPNLHISLHSHVTKVL 302 (1306)
Q Consensus 237 ~~~~~~~~~~G~~~~~~~------------~~~~~g~~~~~~~~~~g~r~s--~~~~~l~~~~~~~nl~I~~~~~V~~I~ 302 (1306)
+...+.+++.|++...+. .....+..+.. .+.... .....|...+++.|++|++++.|++|.
T Consensus 106 ~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~ 181 (381)
T 3nyc_A 106 RRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDP----TGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIR 181 (381)
T ss_dssp HHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEET----TCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEE
T ss_pred HHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcC----CCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEE
Confidence 455566666776522111 00011111111 111110 111122234455689999999999999
Q ss_pred ecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 303 IDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 303 ~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
.+++ . .+|+. .+. ++.|+. ||+|+|+ +|+.|+...|+
T Consensus 182 ~~~~--~-~~V~t--~~g--~i~a~~-VV~A~G~-~s~~l~~~~g~ 218 (381)
T 3nyc_A 182 RVDG--A-WEVRC--DAG--SYRAAV-LVNAAGA-WCDAIAGLAGV 218 (381)
T ss_dssp EETT--E-EEEEC--SSE--EEEESE-EEECCGG-GHHHHHHHHTC
T ss_pred EeCC--e-EEEEe--CCC--EEEcCE-EEECCCh-hHHHHHHHhCC
Confidence 8765 4 34443 333 689977 9999997 57888776664
No 58
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.86 E-value=1.2e-09 Score=132.13 Aligned_cols=35 Identities=40% Similarity=0.653 Sum_probs=32.3
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCC-CEEEEECCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKN-WKVLLLEAG 735 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G-~~VlVLE~G 735 (1306)
+.+|||||||+|++|+++|++|++ .| ++|+|||+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~-~G~~~V~vlE~~ 56 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKV-WSGGSVLVVDAG 56 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH-HHCSCEEEEESS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEccC
Confidence 367999999999999999999999 49 999999994
No 59
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.85 E-value=7.7e-09 Score=128.05 Aligned_cols=59 Identities=14% Similarity=0.114 Sum_probs=46.6
Q ss_pred hhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeC---CeeeeEEEEeCcEEEEcCCCcchHHHhc
Q psy1043 904 LRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKK---GRKDPVLVRARREVILSAGAIGSPQVYL 971 (1306)
Q Consensus 904 L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~---G~~~~~~v~A~k~VVLAAGai~sp~LLl 971 (1306)
|...+.+.|++|+++++|++|..++ ++++||++.+ |+.. .|+|+. ||+|+|++ +..|+-
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~-----g~v~gV~~~d~~tg~~~--~i~A~~-VV~AaG~~-s~~l~~ 237 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQ-----GKVVGVVAKDRLTDTTH--TIYAKK-VVNAAGPW-VDTLRE 237 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEET-----TEEEEEEEEETTTCCEE--EEEEEE-EEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcC-----CeEEEEEEEEcCCCceE--EEECCE-EEECCCcc-hHHHHH
Confidence 4445667899999999999999987 7899999764 5545 789976 99999986 555543
No 60
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.84 E-value=1.2e-08 Score=125.19 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=38.5
Q ss_pred cccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHH
Q psy1043 283 PVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILML 345 (1306)
Q Consensus 283 ~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~ 345 (1306)
..+++.|++|+++++|++|+.+++ +++||++.+ |+ ++.|+. ||++++...+.+.|+-
T Consensus 229 ~~~~~~Gg~I~~~~~V~~I~~~~~--~~~gV~~~~-g~--~~~ad~-VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 229 KLFQDLGGEVVLNARVSHMETTGN--KIEAVHLED-GR--RFLTQA-VASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT--EEEEEEETT-SC--EEECSC-EEECCC----------
T ss_pred HHHHHhCCceeeecceeEEEeeCC--eEEEEEecC-Cc--EEEcCE-EEECCCHHHHHHHhcc
Confidence 345567899999999999999987 999998754 32 578876 9999998877766653
No 61
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.84 E-value=9.8e-09 Score=127.41 Aligned_cols=56 Identities=18% Similarity=0.139 Sum_probs=45.5
Q ss_pred hhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe---CCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 906 PIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK---KGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 906 ~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~---~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
..+.+.|++|+++++|++|..++ +++++|++. +|+.. +|+|+. ||+|+|++ +..|+
T Consensus 196 ~~a~~~Ga~i~~~t~V~~l~~~~-----~~v~gV~~~d~~tg~~~--~i~A~~-VV~AaG~w-s~~l~ 254 (571)
T 2rgh_A 196 KKAAEDGAYLVSKMKAVGFLYEG-----DQIVGVKARDLLTDEVI--EIKAKL-VINTSGPW-VDKVR 254 (571)
T ss_dssp HHHHHTTCEEESSEEEEEEEEET-----TEEEEEEEEETTTCCEE--EEEBSC-EEECCGGG-HHHHH
T ss_pred HHHHHcCCeEEeccEEEEEEEeC-----CEEEEEEEEEcCCCCEE--EEEcCE-EEECCChh-HHHHH
Confidence 45667899999999999999987 689999865 45544 789987 99999987 56665
No 62
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.83 E-value=1.1e-08 Score=126.83 Aligned_cols=62 Identities=16% Similarity=0.093 Sum_probs=50.3
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHHHHhCCC
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQILMLSGIG 349 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG 349 (1306)
.+.+.|++|+++++|++|..+++ ++.||++.+ +++...++|+. ||+|+|+ ++..|+...|+.
T Consensus 179 ~a~~~G~~i~~~~~V~~l~~~~g--~v~gV~~~d~~tg~~~~i~A~~-VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 179 EAVARGAVALNYMKVESFIYDQG--KVVGVVAKDRLTDTTHTIYAKK-VVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHHTTCEEEESEEEEEEEEETT--EEEEEEEEETTTCCEEEEEEEE-EEECCGG-GHHHHHHTTTCC
T ss_pred HHHHcCCEEEcCCEEEEEEEcCC--eEEEEEEEEcCCCceEEEECCE-EEECCCc-chHHHHHhcCCC
Confidence 34456899999999999999866 899999876 56667899976 9999996 588888776653
No 63
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.82 E-value=3.3e-09 Score=126.09 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=43.7
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHH
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~L 969 (1306)
....|...+++.|++|+++++|++|..++ +. +.|.+.+| +++|+. ||+|+|++..|++
T Consensus 134 l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-----~~-~~V~~~~g-----~i~ad~-VIlAtG~~S~p~~ 191 (417)
T 3v76_A 134 IIRMLMAEMKEAGVQLRLETSIGEVERTA-----SG-FRVTTSAG-----TVDAAS-LVVASGGKSIPKM 191 (417)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEEET-----TE-EEEEETTE-----EEEESE-EEECCCCSSCGGG
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEEeC-----CE-EEEEECCc-----EEEeeE-EEECCCCccCCCC
Confidence 33445556667799999999999998876 33 45666666 678987 9999999876653
No 64
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.80 E-value=2.8e-08 Score=118.08 Aligned_cols=35 Identities=34% Similarity=0.618 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|+.|++ .|++|+|||++.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~-~G~~V~vlE~~~ 37 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAE-RGHRVLVLERHT 37 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 46999999999999999999999 799999999985
No 65
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.80 E-value=4.8e-08 Score=121.67 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=42.4
Q ss_pred CCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcH
Q psy1043 286 TRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSP 340 (1306)
Q Consensus 286 ~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp 340 (1306)
+.+|++|++++.|++|+.+++ +++||.+.. +++...+.|+. ||+|+|++...
T Consensus 146 ~~gnv~i~~~~~v~~l~~~~g--~v~Gv~~~~~~~G~~~~i~A~~-VVlAtGg~s~~ 199 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVDDG--HVRGLVAMNMMEGTLVQIRANA-VVMATGGAGRV 199 (602)
T ss_dssp TCTTEEEEETEEEEEEEEETT--EEEEEEEEETTTTEEEEEECSC-EEECCCCCGGG
T ss_pred hCCCcEEEeCCEEEEEEEeCC--EEEEEEEEEcCCCcEEEEEcCe-EEECCCCCccc
Confidence 344599999999999998865 899998764 56667899976 99999997643
No 66
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.80 E-value=4.8e-09 Score=126.53 Aligned_cols=54 Identities=19% Similarity=0.281 Sum_probs=41.5
Q ss_pred cccCCCCeEEEecc---EEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHH
Q psy1043 283 PVKTRPNLHISLHS---HVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQIL 343 (1306)
Q Consensus 283 ~~~~~~nl~I~~~~---~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LL 343 (1306)
..+++.|++|++++ +|++|..+++ +++||++. ++. ++.|+. ||+|+|+. |+.|+
T Consensus 169 ~~a~~~Gv~i~~~t~~~~V~~i~~~~~--~v~gV~t~-~G~--~i~Ad~-VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 169 REAQRMGVKFVTGTPQGRVVTLIFENN--DVKGAVTA-DGK--IWRAER-TFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHTTCEEEESTTTTCEEEEEEETT--EEEEEEET-TTE--EEECSE-EEECCGGG-GGGTS
T ss_pred HHHHhcCCEEEeCCcCceEEEEEecCC--eEEEEEEC-CCC--EEECCE-EEECCCCC-hhhhc
Confidence 34456789999999 9999998766 88888764 342 588977 99999985 55554
No 67
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.79 E-value=7.6e-09 Score=123.32 Aligned_cols=57 Identities=25% Similarity=0.324 Sum_probs=42.8
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
.+++.|++|++++.|++|..+++ ++.+|... ++ ++.|+. ||+|+|+ .++.|+...|+
T Consensus 183 ~~~~~g~~i~~~~~v~~i~~~~~--~~~~v~~~-~g---~~~a~~-vV~a~G~-~s~~l~~~~g~ 239 (405)
T 2gag_B 183 KANEMGVDIIQNCEVTGFIKDGE--KVTGVKTT-RG---TIHAGK-VALAGAG-HSSVLAEMAGF 239 (405)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS--BEEEEEET-TC---CEEEEE-EEECCGG-GHHHHHHHHTC
T ss_pred HHHHCCCEEEcCCeEEEEEEeCC--EEEEEEeC-Cc---eEECCE-EEECCch-hHHHHHHHcCC
Confidence 34457899999999999998765 67777653 33 588876 9999997 46677666654
No 68
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.78 E-value=2.2e-08 Score=122.63 Aligned_cols=57 Identities=19% Similarity=0.154 Sum_probs=44.1
Q ss_pred hhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe---CCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 904 LRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK---KGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 904 L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~---~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
|...+.+.|++|+++++|++|..++ ++++|.+. +|+.. +|+|+. ||+|+|++ +..|+
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~--~i~A~~-VV~AtG~~-s~~l~ 214 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKY--SWQARG-LVNATGPW-VKQFF 214 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEE--EEEESC-EEECCGGG-HHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEE--EEECCE-EEECCChh-HHHHH
Confidence 4445667799999999999998874 47788864 56555 789987 99999997 55554
No 69
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.77 E-value=1.4e-08 Score=123.19 Aligned_cols=52 Identities=13% Similarity=0.233 Sum_probs=39.5
Q ss_pred hhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcc
Q psy1043 904 LRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 904 L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~ 965 (1306)
|...+++.|++|++++.| +|+.++ +++.||.+.+.. . .+.++. ||+|+|++.
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~-----~~v~Gv~v~~~~-g--~~~a~~-VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKD-----GKVTGFVTEKRG-L--VEDVDK-LVLATGGYS 176 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEET-----TEEEEEEETTTE-E--ECCCSE-EEECCCCCG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeC-----CEEEEEEEEeCC-C--eEEeee-EEECCCCCc
Confidence 434456789999999999 998886 789999864321 1 456876 999999874
No 70
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.77 E-value=2.9e-08 Score=116.77 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=32.2
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|++|++. |++|+|||++.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 58999999999999999999994 99999999986
No 71
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.76 E-value=1.3e-08 Score=127.29 Aligned_cols=50 Identities=16% Similarity=0.271 Sum_probs=41.0
Q ss_pred CeEEEeccEEEEEEecCCC-CeEEEEEEEe--CCeEEEEEEcceEEEccCCCCc
Q psy1043 289 NLHISLHSHVTKVLIDPKN-RMAIGVEFVK--NHQRHVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 289 nl~I~~~~~V~~I~~d~~~-~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~S 339 (1306)
|++|+.++.|++|+.++++ +++.||.+.+ +++...|.|+. ||||+|++..
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~-VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANA-MVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSE-EEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCE-EEECCCcccc
Confidence 8999999999999997641 3899998764 56677889965 9999999763
No 72
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.75 E-value=1.3e-08 Score=120.69 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=33.5
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.+|||||||+|++|+++|++|++. |.+|+|||+++
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~ 37 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGK 37 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 4579999999999999999999994 99999999986
No 73
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.75 E-value=2e-08 Score=130.70 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=42.9
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
.+.+.|++|++++.|++|..+++ ++++|.. .+. ++.|+. ||+|+|+ +++.|+...|+
T Consensus 160 ~a~~~Gv~i~~~t~V~~i~~~~~--~v~~V~t--~~G--~i~Ad~-VV~AaG~-~s~~l~~~~g~ 216 (830)
T 1pj5_A 160 RTESAGVTYRGSTTVTGIEQSGG--RVTGVQT--ADG--VIPADI-VVSCAGF-WGAKIGAMIGM 216 (830)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT--EEEEEEE--TTE--EEECSE-EEECCGG-GHHHHHHTTTC
T ss_pred HHHHcCCEEECCceEEEEEEeCC--EEEEEEE--CCc--EEECCE-EEECCcc-chHHHHHHhCC
Confidence 44556899999999999998765 7777764 222 588976 9999997 46777665554
No 74
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.74 E-value=2.6e-08 Score=123.55 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=47.8
Q ss_pred cCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 285 KTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 285 ~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
+.+.|++|+++++|++|..+++ ++.||++.+ +++..+|+|+. ||+|+|++ +..|+...|+
T Consensus 198 a~~~Ga~i~~~t~V~~l~~~~~--~v~gV~~~d~~tg~~~~i~A~~-VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 198 AAEDGAYLVSKMKAVGFLYEGD--QIVGVKARDLLTDEVIEIKAKL-VINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHTTCEEESSEEEEEEEEETT--EEEEEEEEETTTCCEEEEEBSC-EEECCGGG-HHHHHTTCCS
T ss_pred HHHcCCeEEeccEEEEEEEeCC--EEEEEEEEEcCCCCEEEEEcCE-EEECCChh-HHHHHHhhcc
Confidence 4467899999999999999876 899998875 45556799976 99999975 7787765443
No 75
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.73 E-value=4.5e-08 Score=117.41 Aligned_cols=59 Identities=17% Similarity=0.243 Sum_probs=48.1
Q ss_pred hhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHhc
Q psy1043 902 AYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYL 971 (1306)
Q Consensus 902 ~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LLl 971 (1306)
..|...+++.|++|+++++|++|..++ ++++||.+. |+ ++.|+. ||+|+++..+.+||-
T Consensus 200 ~~l~~~~~~~G~~i~~~~~V~~i~~~~-----~~~~gv~~~-g~----~~~ad~-VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 200 DALETVISANGGKIHTGQEVSKILIEN-----GKAAGIIAD-DR----IHDADL-VISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEET-----TEEEEEEET-TE----EEECSE-EEECSCHHHHHHHTT
T ss_pred HHHHHHHHHcCCEEEECCceeEEEEEC-----CEEEEEEEC-CE----EEECCE-EEECCCHHHHHHhcC
Confidence 335456677899999999999999987 789899874 54 788987 999999998887664
No 76
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.71 E-value=5.9e-08 Score=118.50 Aligned_cols=55 Identities=22% Similarity=0.387 Sum_probs=45.7
Q ss_pred hhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 902 AYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 902 ~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
..|...+++.|++|+++++|++|..++ +++++|.+.+|+ ++.|+. ||+|+|+...
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~~~-----~~v~gV~l~~G~----~i~Ad~-VVlA~G~~s~ 278 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHMED-----GQITGVTLSNGE----EIKSRH-VVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEESS-----SBEEEEEETTSC----EEECSC-EEECCCTTCH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEEeC-----CEEEEEEECCCC----EEECCE-EEECCCCChh
Confidence 334455666799999999999999887 689999998886 788988 9999999764
No 77
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.71 E-value=5.7e-08 Score=122.21 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=40.1
Q ss_pred Ce-EEEeccEEEEEEecCC-CCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCc
Q psy1043 289 NL-HISLHSHVTKVLIDPK-NRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 289 nl-~I~~~~~V~~I~~d~~-~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~S 339 (1306)
|+ +|++++.|++|+.+++ .++++||.+.. +++...+.|+. ||||+|++..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~-VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKA-VILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSE-EEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCE-EEECCCcccc
Confidence 89 9999999999998754 12899998753 56666788855 9999999865
No 78
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.70 E-value=1e-07 Score=112.82 Aligned_cols=34 Identities=41% Similarity=0.619 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+++|++|++ .|++|+|||++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-~G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 6999999999999999999999 799999999985
No 79
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.67 E-value=5.6e-08 Score=109.62 Aligned_cols=36 Identities=42% Similarity=0.539 Sum_probs=32.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|+.|++.+|.+|+|||+.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 369999999999999999999992299999999986
No 80
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.66 E-value=5.3e-08 Score=115.34 Aligned_cols=60 Identities=25% Similarity=0.197 Sum_probs=44.4
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEE-EeCCeeeeEEEEeCcEEEEcCCCcchH
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVV-VKKGRKDPVLVRARREVILSAGAIGSP 967 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~-~~~G~~~~~~v~A~k~VVLAAGai~sp 967 (1306)
....+|...+.+.|++++.+++|+.+..++ +++++|. ..++... +++|+- ||.|.| .+|.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-----~~~~~v~~~~~~~~~--~~~a~~-vIgAdG-~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN-----GKVAGAKIRHNNEIV--DVRAKM-VIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET-----TEEEEEEEEETTEEE--EEEEEE-EEECCC-TTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc-----ceeeeeeecccccce--EEEEeE-EEeCCc-cccH
Confidence 345556667778899999999999999987 7888888 4566655 788964 555555 4544
No 81
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.64 E-value=2e-08 Score=121.37 Aligned_cols=34 Identities=38% Similarity=0.683 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC-CEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN-WKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G-~~VLvLE~G 112 (1306)
.+|||||||+|.+|+++|++|++ .| ++|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~-~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKV-WSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-HHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEccC
Confidence 57999999999999999999999 68 999999994
No 82
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.61 E-value=7.2e-08 Score=114.40 Aligned_cols=59 Identities=24% Similarity=0.204 Sum_probs=45.1
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe-CCeeeeEEEEeCcEEEEcCCCcc
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK-KGRKDPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~-~G~~~~~~v~A~k~VVLAAGai~ 965 (1306)
....+|...+.+.|++|+.+++|++|..++ ++++||.+. .+... ++.|+. ||.|+|...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-----~~v~gv~~~~~~~~~--~~~a~~-vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN-----GKVAGAKIRHNNEIV--DVRAKM-VIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET-----TEEEEEEEEETTEEE--EEEEEE-EEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC-----CEEEEEEEEECCeEE--EEEcCE-EEECCCcch
Confidence 344456556666899999999999999887 789889864 34444 788976 999999765
No 83
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.60 E-value=9.1e-08 Score=121.71 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||||.+|+++|++|++ .|++|+|||++.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLR-RGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 45999999999999999999999 799999999974
No 84
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.59 E-value=2e-08 Score=121.09 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=40.7
Q ss_pred cccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcH
Q psy1043 283 PVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSP 340 (1306)
Q Consensus 283 ~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp 340 (1306)
..+++.|++|++++.|++|..+++ ++.+|++. ++. ++.|+. ||+|+|+...|
T Consensus 142 ~~~~~~GV~i~~~~~V~~i~~~~~--~v~~V~~~-~G~--~i~Ad~-VVlAtGg~s~~ 193 (447)
T 2i0z_A 142 TRLKDLGVKIRTNTPVETIEYENG--QTKAVILQ-TGE--VLETNH-VVIAVGGKSVP 193 (447)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT--EEEEEEET-TCC--EEECSC-EEECCCCSSSG
T ss_pred HHHHHCCCEEEeCcEEEEEEecCC--cEEEEEEC-CCC--EEECCE-EEECCCCCcCC
Confidence 344457899999999999998765 77888764 342 588876 99999998765
No 85
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.57 E-value=4.9e-08 Score=116.61 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=41.6
Q ss_pred hhhhhhcCCCcEEEecceEEEEEe-cCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCc
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHF-EPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~-~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai 964 (1306)
.|...+++.|++|+++++|++|+. ++ ++++||++.+|+ +++|+. ||+++|-+
T Consensus 261 aL~r~~~~~Gg~i~l~t~V~~I~~d~~-----g~v~gV~~~~G~----~i~Ad~-VI~a~~~~ 313 (475)
T 3p1w_A 261 GFSRMCAINGGTFMLNKNVVDFVFDDD-----NKVCGIKSSDGE----IAYCDK-VICDPSYV 313 (475)
T ss_dssp HHHHHHHHC--CEESSCCEEEEEECTT-----SCEEEEEETTSC----EEEEEE-EEECGGGC
T ss_pred HHHHHHHHcCCEEEeCCeEEEEEEecC-----CeEEEEEECCCc----EEECCE-EEECCCcc
Confidence 344567788999999999999999 44 789999998886 688987 99999865
No 86
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.56 E-value=1.7e-07 Score=106.59 Aligned_cols=35 Identities=40% Similarity=0.578 Sum_probs=32.5
Q ss_pred CccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|++|++. +|++|+|||++.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 69999999999999999999983 399999999986
No 87
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.54 E-value=1e-07 Score=121.47 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++||||||||.+|+++|++|++ .|++|+|||++.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~-~G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQR-RGAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHT-TTCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 46999999999999999999999 799999999974
No 88
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.52 E-value=3.6e-07 Score=109.38 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=44.9
Q ss_pred hhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHhc
Q psy1043 902 AYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYL 971 (1306)
Q Consensus 902 ~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LLl 971 (1306)
..|...+++.|++|+++++|++|..++ +++ | ..+|+ ++.|+. ||+|+|...+.+||-
T Consensus 193 ~~l~~~~~~~G~~i~~~~~V~~i~~~~-----~~v--V-~~~g~----~~~ad~-Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 193 DELERIIMENKGKILTRKEVVEINIEE-----KKV--Y-TRDNE----EYSFDV-AISNVGVRETVKLIG 249 (421)
T ss_dssp HHHHHHHHTTTCEEESSCCEEEEETTT-----TEE--E-ETTCC----EEECSE-EEECSCHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEEcCCeEEEEEEEC-----CEE--E-EeCCc----EEEeCE-EEECCCHHHHHHhcC
Confidence 335556678899999999999999876 566 5 44564 788987 999999998888763
No 89
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.52 E-value=5.7e-07 Score=105.62 Aligned_cols=34 Identities=29% Similarity=0.579 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+++|++|++ .|++|+|||++.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~-~G~~V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR-AGLNVLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 5899999999999999999999 799999999985
No 90
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.52 E-value=2.3e-08 Score=118.18 Aligned_cols=36 Identities=33% Similarity=0.573 Sum_probs=33.5
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+|||||||+|++|+++|++|++ .|++|+|||++.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~-~G~~V~llE~~~ 50 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESGT 50 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 357999999999999999999999 799999999984
No 91
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.52 E-value=3.6e-08 Score=117.13 Aligned_cols=37 Identities=22% Similarity=0.475 Sum_probs=32.3
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
..+|||||||+|++|+++|..|++ .|++|+|||+++.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~-~G~~V~llEk~~~ 61 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGK-RGRRVLVIDHARA 61 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCCC
Confidence 357999999999999999999999 7999999999863
No 92
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.52 E-value=1.6e-07 Score=105.82 Aligned_cols=36 Identities=39% Similarity=0.523 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+.+|..|++.+|.+|+|||+.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 469999999999999999999982399999999985
No 93
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.51 E-value=1.4e-07 Score=115.73 Aligned_cols=54 Identities=26% Similarity=0.407 Sum_probs=42.5
Q ss_pred hhhhhhhcC-CCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 902 AYLRPIIAR-PNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 902 ~~L~~~~~~-~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
..|...+++ .|++| .+++|+.|..++ +++++|.+.+|. .+.|+. ||+|+|++..
T Consensus 128 ~~L~e~Le~~~GV~I-~~~~V~~L~~e~-----g~V~GV~t~dG~----~I~Ad~-VVLATGt~s~ 182 (651)
T 3ces_A 128 QAVRTALENQPNLMI-FQQAVEDLIVEN-----DRVVGAVTQMGL----KFRAKA-VVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHTCTTEEE-EECCEEEEEESS-----SBEEEEEETTSE----EEEEEE-EEECCSTTTC
T ss_pred HHHHHHHHhCCCCEE-EEEEEEEEEecC-----CEEEEEEECCCC----EEECCE-EEEcCCCCcc
Confidence 344445555 79999 578999999876 689999988884 788976 9999999753
No 94
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.51 E-value=3.7e-07 Score=108.19 Aligned_cols=64 Identities=19% Similarity=0.272 Sum_probs=47.2
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
+|...+.+.|++|+.+++|++|..+++ +++||.+...+...++.|+. ||.|+|. +| .+....|+
T Consensus 107 ~L~~~~~~~gv~i~~~~~v~~i~~~~~--~v~gv~~~~~~~~~~~~a~~-vV~A~G~-~s-~~~~~~g~ 170 (397)
T 3cgv_A 107 HLAALAAKAGADVWVKSPALGVIKENG--KVAGAKIRHNNEIVDVRAKM-VIAADGF-ES-EFGRWAGL 170 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEETT--EEEEEEEEETTEEEEEEEEE-EEECCCT-TC-HHHHHHTC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEeCC--EEEEEEEEECCeEEEEEcCE-EEECCCc-ch-HhHHhcCC
Confidence 343444557899999999999998865 89999987766677899975 8888886 44 44333344
No 95
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.50 E-value=2.3e-07 Score=109.76 Aligned_cols=57 Identities=19% Similarity=0.279 Sum_probs=43.8
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcH
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSP 340 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp 340 (1306)
+|...+.+.|++++.++.|+.+..+++ ++++|....++...+++|+- ||.|.| .+|.
T Consensus 107 ~L~~~a~~~G~~~~~~~~v~~~~~~~~--~~~~v~~~~~~~~~~~~a~~-vIgAdG-~~S~ 163 (397)
T 3oz2_A 107 HLAALAAKAGADVWVKSPALGVIKENG--KVAGAKIRHNNEIVDVRAKM-VIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEETT--EEEEEEEEETTEEEEEEEEE-EEECCC-TTCH
T ss_pred HHHHHHHhcCcEEeeeeeeeeeeeccc--eeeeeeecccccceEEEEeE-EEeCCc-cccH
Confidence 444445567899999999999999877 89999888888888899953 555555 5654
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.50 E-value=2.8e-07 Score=111.64 Aligned_cols=48 Identities=17% Similarity=0.175 Sum_probs=36.9
Q ss_pred cCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCC
Q psy1043 285 KTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVN 338 (1306)
Q Consensus 285 ~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~ 338 (1306)
+++.|++|+.++.| +|+.+++ ++.||.+...+. .+.++. ||+|+|+..
T Consensus 129 ~~~~gv~i~~~~~v-~l~~~~~--~v~Gv~v~~~~g--~~~a~~-VVlAtGg~~ 176 (472)
T 2e5v_A 129 AREEGIPIIEDRLV-EIRVKDG--KVTGFVTEKRGL--VEDVDK-LVLATGGYS 176 (472)
T ss_dssp HHHTTCCEECCCEE-EEEEETT--EEEEEEETTTEE--ECCCSE-EEECCCCCG
T ss_pred HHhCCCEEEECcEE-EEEEeCC--EEEEEEEEeCCC--eEEeee-EEECCCCCc
Confidence 35679999999999 9988765 899988753322 366765 999999864
No 97
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.49 E-value=1.4e-07 Score=115.38 Aligned_cols=57 Identities=14% Similarity=0.293 Sum_probs=44.3
Q ss_pred HhhhhhhhcC-CCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHH
Q psy1043 901 KAYLRPIIAR-PNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQ 968 (1306)
Q Consensus 901 ~~~L~~~~~~-~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~ 968 (1306)
...|...+++ .|++| .+++|+.|..++ ++++||.+.+|. .+.|+. ||+|+|++....
T Consensus 126 ~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-----g~V~GV~t~dG~----~i~Ada-VVLATG~~s~~~ 183 (637)
T 2zxi_A 126 REYMKKVCENQENLYI-KQEEVVDIIVKN-----NQVVGVRTNLGV----EYKTKA-VVVTTGTFLNGV 183 (637)
T ss_dssp HHHHHHHHHTCTTEEE-EESCEEEEEESS-----SBEEEEEETTSC----EEECSE-EEECCTTCBTCE
T ss_pred HHHHHHHHHhCCCCEE-EEeEEEEEEecC-----CEEEEEEECCCc----EEEeCE-EEEccCCCccCc
Confidence 3344445555 69999 578999999887 789999998885 788976 999999985443
No 98
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.47 E-value=4.6e-07 Score=110.91 Aligned_cols=56 Identities=14% Similarity=0.051 Sum_probs=43.5
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHHH
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQILM 344 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LLl 344 (1306)
.+.+.|++|+++++|++|..++ .+.+|.+.+ +++..+++|+. ||+|+|+. +..|+.
T Consensus 158 ~a~~~Gv~i~~~~~V~~l~~~~---~~~~V~~~d~~~G~~~~i~A~~-VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 158 MVVRKGGEVLTRTRATSARREN---GLWIVEAEDIDTGKKYSWQARG-LVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHTTCEEECSEEEEEEEEET---TEEEEEEEETTTCCEEEEEESC-EEECCGGG-HHHHHH
T ss_pred HHHHcCCEEEcCcEEEEEEEeC---CEEEEEEEECCCCCEEEEECCE-EEECCChh-HHHHHH
Confidence 3445689999999999999864 467888764 56666899976 99999974 777665
No 99
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.46 E-value=2.2e-07 Score=112.22 Aligned_cols=42 Identities=24% Similarity=0.381 Sum_probs=37.0
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCC
Q psy1043 698 EMYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESP 740 (1306)
Q Consensus 698 ~~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 740 (1306)
.|+.+|||||||||++|+++|++|++ .|++|+||||.+....
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~-~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCG
T ss_pred hccccCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCCCCCc
Confidence 34567999999999999999999999 5999999999986543
No 100
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.46 E-value=6.7e-07 Score=110.91 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=45.5
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe-CCeeeeEEEEeCcEEEEcCCCcc
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK-KGRKDPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~-~G~~~~~~v~A~k~VVLAAGai~ 965 (1306)
.+..+|...+++.|++|+.+++|++|..++ +.+++|.+. +|... +++|+. ||.|+|...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-----g~~~~V~~~~~G~~~--~i~Adl-VV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD-----PDRVVLTVRRGGESV--TVESDF-VIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS-----TTCEEEEEEETTEEE--EEEESE-EEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-----CCEEEEEEecCCceE--EEEcCE-EEECCCCcc
Confidence 344556566667899999999999998875 467788866 77555 789987 999999743
No 101
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.45 E-value=4.2e-07 Score=109.84 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=45.8
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe---CCeeeeEEEEeCcEEEEcCCCcch
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK---KGRKDPVLVRARREVILSAGAIGS 966 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~---~G~~~~~~v~A~k~VVLAAGai~s 966 (1306)
....|...+.+.|++|+++++|++|..++ ++++||.+. +|+.. +++|+. ||.|.|+...
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----~~v~gv~~~~~~~G~~~--~~~ad~-VV~AdG~~s~ 163 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFED-----GYVKGAVLFNRRTNEEL--TVYSKV-VVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEET-----TEEEEEEEEETTTTEEE--EEECSE-EEECCGGGCT
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEEC-----CEEEEEEEEEcCCCceE--EEEcCE-EEECcCCchh
Confidence 33445555666899999999999999876 688888854 67655 788986 9999998654
No 102
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.45 E-value=4.8e-07 Score=102.33 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=32.5
Q ss_pred CCccEEEECCChHHHHHHHHHHcCC--CCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQK--NWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~--G~~VlVLE~G~ 736 (1306)
.+|||+|||+|++|+++|+.|++ . |++|+|+|+++
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~-~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAK-NRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHh-cCCCCeEEEEecCc
Confidence 36899999999999999999998 5 99999999986
No 103
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.44 E-value=4e-07 Score=106.04 Aligned_cols=60 Identities=25% Similarity=0.114 Sum_probs=45.1
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
...++...+++.|++++++++|++|..++ +.+.+|.+.+| ++.++. ||+|+|+...|.+.
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-----~~~~~v~~~~g-----~~~~d~-vV~AtG~~~~~~~~ 137 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSHFG-----ERLRVVARDGR-----QWLARA-VISATGTWGEAYTP 137 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEEET-----TEEEEEETTSC-----EEEEEE-EEECCCSGGGBCCC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEECC-----CcEEEEEeCCC-----EEEeCE-EEECCCCCCCCCCC
Confidence 44556666777899999999999998876 45554766665 677877 99999987665443
No 104
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.42 E-value=1.5e-07 Score=112.06 Aligned_cols=34 Identities=41% Similarity=0.693 Sum_probs=32.3
Q ss_pred CccEEEECCChHHHHHHHHHHcCC--CCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQK--NWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~--G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|++|++ . |++|+|||++.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~-~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQ-LAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHh-cCCCCeEEEEeCCC
Confidence 5999999999999999999999 6 99999999985
No 105
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.42 E-value=3.3e-07 Score=111.89 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||+|++|+++|+.|++ .|++|+|||+++
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~-~G~kV~VlEr~~ 140 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGK 140 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHH-TTCCCEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEEccC
Confidence 46999999999999999999999 799999999996
No 106
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.42 E-value=3.7e-07 Score=105.92 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHc---CCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSE---QKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae---~~G~~VlVLE~G~ 736 (1306)
+||||||+|++|+++|+.|++ . |++|+|+||++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCC
Confidence 699999999999999999998 6 99999999986
No 107
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.42 E-value=4.8e-07 Score=98.65 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=41.9
Q ss_pred HhhhhhhhcCC-CcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcc
Q psy1043 901 KAYLRPIIARP-NLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 901 ~~~L~~~~~~~-g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~ 965 (1306)
..+|...+++. |++++ +++|++|..++ +++++|.+.+|. +++++. ||+|+|.+.
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-----~~v~~v~~~~g~----~i~a~~-VV~A~G~~s 125 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEG-----NRVVGVRTWEGP----PARGEK-VVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEET-----TEEEEEEETTSC----CEECSE-EEECCTTCS
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeC-----CEEEEEEECCCC----EEECCE-EEECCCCCh
Confidence 34455555564 99999 67999999876 678888888885 678987 999999863
No 108
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.41 E-value=1.7e-06 Score=98.38 Aligned_cols=36 Identities=42% Similarity=0.633 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCC-CCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEI-ENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~-~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|..|++. +|++|+|||++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 369999999999999999999982 499999999985
No 109
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.40 E-value=5.6e-07 Score=111.94 Aligned_cols=61 Identities=15% Similarity=0.189 Sum_probs=46.2
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe------CCee-------eeEEEEeCcEEEEcCCCcc
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK------KGRK-------DPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~------~G~~-------~~~~v~A~k~VVLAAGai~ 965 (1306)
....+|...+++.|++|++++.|++|+.+++ ++++||.+. +|+. . +++|+. ||+|.|+..
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~----g~V~gV~~~~~g~~~~G~~~~~~~~g~--~i~Ad~-VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED----GSVKGIATNDVGIQKDGAPKTTFERGL--ELHAKV-TIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT----SSEEEEEECCEEECTTSCEEEEEECCC--EEECSE-EEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC----CCEEEEEeCCccccCCCCcccccCCce--EEECCE-EEEeeCCCc
Confidence 3445566666677999999999999998752 578888865 4532 3 788976 999999986
Q ss_pred h
Q psy1043 966 S 966 (1306)
Q Consensus 966 s 966 (1306)
.
T Consensus 218 ~ 218 (584)
T 2gmh_A 218 H 218 (584)
T ss_dssp H
T ss_pred h
Confidence 5
No 110
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.39 E-value=5.1e-07 Score=110.88 Aligned_cols=55 Identities=25% Similarity=0.471 Sum_probs=42.2
Q ss_pred hhhhhhhcC-CCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchH
Q psy1043 902 AYLRPIIAR-PNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSP 967 (1306)
Q Consensus 902 ~~L~~~~~~-~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp 967 (1306)
..+...+++ .|++|+ +..|+.|..++ +++.||.+.+|. .+.|+. ||+|+|++...
T Consensus 121 ~~L~~~l~~~~GV~I~-~~~V~~L~~d~-----g~V~GV~t~~G~----~i~Ad~-VVLATG~~s~~ 176 (641)
T 3cp8_A 121 LYMRRIVEHEPNIDLL-QDTVIGVSANS-----GKFSSVTVRSGR----AIQAKA-AILACGTFLNG 176 (641)
T ss_dssp HHHHHHHHTCTTEEEE-ECCEEEEEEET-----TEEEEEEETTSC----EEEEEE-EEECCTTCBTC
T ss_pred HHHHHHHHhCCCCEEE-eeEEEEEEecC-----CEEEEEEECCCc----EEEeCE-EEECcCCCCCc
Confidence 334444555 699996 56999999887 689999988885 788976 99999997443
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.38 E-value=6.1e-07 Score=103.74 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=32.0
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
++||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~-~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 4799999999999999999999 599999999986
No 112
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.36 E-value=8.5e-07 Score=108.88 Aligned_cols=59 Identities=24% Similarity=0.248 Sum_probs=45.9
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe--CCeeeeEEEEeCcEEEEcCCCcc
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK--KGRKDPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~--~G~~~~~~v~A~k~VVLAAGai~ 965 (1306)
.+..+|...+.+.|++|+.+++|++|..++ +++++|.+. +|+.. +++|+. ||.|+|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-----~~v~gv~~~~~dG~~~--~i~ad~-VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG-----ERAVGVRYRNTEGVEL--MAHARF-IVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET-----TEEEEEEEECSSSCEE--EEEEEE-EEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-----CEEEEEEEEeCCCCEE--EEEcCE-EEECCCcch
Confidence 344556556667899999999999999987 788888854 46545 788976 999999764
No 113
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.36 E-value=1.1e-06 Score=105.12 Aligned_cols=59 Identities=20% Similarity=0.127 Sum_probs=43.6
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcc
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIG 965 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~ 965 (1306)
....|...+++.|++|+.+++|++|..+++ +.++.|.+.+|+.. +++|+. ||.|+|...
T Consensus 108 ~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~----~~~v~v~~~~g~~~--~~~a~~-vV~A~G~~s 166 (421)
T 3nix_A 108 FDKTLADEAARQGVDVEYEVGVTDIKFFGT----DSVTTIEDINGNKR--EIEARF-IIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHTCEEECSEEEEEEEEETT----EEEEEEEETTSCEE--EEEEEE-EEECCGGGC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC----EEEEEEEcCCCCEE--EEEcCE-EEECCCCch
Confidence 444555566667999999999999998751 34455667788765 789976 999999754
No 114
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.35 E-value=4.3e-07 Score=109.08 Aligned_cols=33 Identities=55% Similarity=0.812 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
|||||||||++|+++|++|++. |++|+|||+.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCC
Confidence 8999999999999999999994 99999999975
No 115
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.32 E-value=5.6e-07 Score=106.48 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|.+|++ .|.+|+|||+++
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~-~G~~V~vlEk~~ 37 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGK 37 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 36999999999999999999999 799999999986
No 116
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.30 E-value=1.5e-06 Score=104.11 Aligned_cols=54 Identities=22% Similarity=0.228 Sum_probs=42.3
Q ss_pred ccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHH
Q psy1043 284 VKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILM 344 (1306)
Q Consensus 284 ~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl 344 (1306)
.+.+.|++|++++.|++|..+++ +++||.. +++ ++.|+. ||+|+++..+.+||.
T Consensus 205 ~~~~~G~~i~~~~~V~~i~~~~~--~~~gv~~--~g~--~~~ad~-VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 205 VISANGGKIHTGQEVSKILIENG--KAAGIIA--DDR--IHDADL-VISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT--EEEEEEE--TTE--EEECSE-EEECSCHHHHHHHTT
T ss_pred HHHHcCCEEEECCceeEEEEECC--EEEEEEE--CCE--EEECCE-EEECCCHHHHHHhcC
Confidence 44556899999999999999876 8888875 343 588876 999999877776553
No 117
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.28 E-value=1.2e-06 Score=99.00 Aligned_cols=35 Identities=31% Similarity=0.514 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHhCCC--CCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIE--NWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~--G~~VLvLE~G~ 113 (1306)
.+|||+|||+|++|+++|..|++ . |++|+|+|+.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~-~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAK-NRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHh-cCCCCeEEEEecCc
Confidence 46899999999999999999998 5 99999999985
No 118
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.27 E-value=2.2e-06 Score=103.46 Aligned_cols=54 Identities=9% Similarity=0.114 Sum_probs=42.4
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCC
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAV 337 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai 337 (1306)
|...+.+.|++|+.++.|++|..+++ +++||.+.. +|+..++.|+. ||.|.|+.
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~--~v~gv~~~~~~~G~~~~~~ad~-VV~AdG~~ 161 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDG--YVKGAVLFNRRTNEELTVYSKV-VVEATGYS 161 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT--EEEEEEEEETTTTEEEEEECSE-EEECCGGG
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECC--EEEEEEEEEcCCCceEEEEcCE-EEECcCCc
Confidence 33334457899999999999998766 888998875 56666789976 99999964
No 119
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.27 E-value=2e-06 Score=97.88 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=32.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.|+.|||||||||++|++||++|++ .|++|+|+|++.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar-~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGR-ARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 3578999999999999999999999 599999999974
No 120
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.26 E-value=8.6e-06 Score=100.58 Aligned_cols=35 Identities=34% Similarity=0.455 Sum_probs=32.9
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.++||||||+|++|+++|+.|++ .|.+|+||||.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~-~G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR-QGVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 46999999999999999999999 599999999986
No 121
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.25 E-value=1.3e-06 Score=103.80 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=44.1
Q ss_pred hHhhhhhhhcCC-CcEEEecceEEEEEecCCCCCCceEE-EEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 900 AKAYLRPIIARP-NLHVSLHSHAYRVHFEPGPDGQMRAT-GVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 900 ~~~~L~~~~~~~-g~~i~~~~~V~~I~~~~~~~~~~rv~-GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
....|...+.+. |++|+++++|++|..++ +.++ .|++.+|+ +++++. ||.|.|....-+-+
T Consensus 109 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-----~~v~g~v~~~~g~----~~~ad~-vV~AdG~~s~vr~~ 171 (399)
T 2x3n_A 109 LRRLVLEKIDGEATVEMLFETRIEAVQRDE-----RHAIDQVRLNDGR----VLRPRV-VVGADGIASYVRRR 171 (399)
T ss_dssp HHHHHHHHHTTCTTEEEECSCCEEEEEECT-----TSCEEEEEETTSC----EEEEEE-EEECCCTTCHHHHH
T ss_pred HHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-----CceEEEEEECCCC----EEECCE-EEECCCCChHHHHH
Confidence 344455566665 99999999999998876 4454 56677776 678876 99999986544333
No 122
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.22 E-value=1.6e-06 Score=103.11 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=32.5
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+.|||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-SGIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 457999999999999999999999 499999999986
No 123
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.22 E-value=2e-06 Score=104.65 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=41.7
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.|...+.+.|++|+++++|++|..++ ++++.|.+ ++. ++.+++ ||+|+++....+||
T Consensus 239 ~l~~~l~~~g~~i~~~~~V~~i~~~~-----~~~~~v~~-~~~----~~~ad~-vv~a~p~~~~~~ll 295 (477)
T 3nks_A 239 ALETHLTSRGVSVLRGQPVCGLSLQA-----EGRWKVSL-RDS----SLEADH-VISAIPASVLSELL 295 (477)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEECG-----GGCEEEEC-SSC----EEEESE-EEECSCHHHHHHHS
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEEcC-----CceEEEEE-CCe----EEEcCE-EEECCCHHHHHHhc
Confidence 34445566799999999999998875 34445655 343 678987 99999987666664
No 124
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.21 E-value=1.6e-06 Score=106.60 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||.+|+.+|..|++ .|++|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR-MGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHh-CCCCEEEEeecc
Confidence 57999999999999999999999 799999999873
No 125
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.20 E-value=1.6e-06 Score=106.22 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||.+|+.+|..|++ .|.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr-~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR-MGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCCEEEEEecc
Confidence 46999999999999999999999 799999999873
No 126
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.19 E-value=5.5e-06 Score=100.74 Aligned_cols=37 Identities=32% Similarity=0.436 Sum_probs=33.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCC--CEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKN--WKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G--~~VlVLE~G~~~ 738 (1306)
..+||||||+|++|+++|++|++ .| ++|+|||+.+..
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~-~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAER-AFPDLNITLLEAGERL 41 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHH-HCTTSEEEEECSSSSS
T ss_pred CcccEEEECCCHHHHHHHHHHHH-hCCCCCEEEEECCCCC
Confidence 36899999999999999999999 48 999999997643
No 127
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.18 E-value=3.7e-06 Score=103.54 Aligned_cols=63 Identities=19% Similarity=0.268 Sum_probs=46.9
Q ss_pred hhHhhhhhhhcCCCc--EEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 899 TAKAYLRPIIARPNL--HVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~--~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
....|+...+++.++ +|+++++|+++..+++ .....|.+.+|+ ++.++. ||+|+|.+..|.+.
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~----~~~w~V~~~~G~----~i~ad~-lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE----GLRWTVRTDRGD----EVSARF-LVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT----TTEEEEEETTCC----EEEEEE-EEECCCSEEECCCC
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC----CCEEEEEECCCC----EEEeCE-EEECcCCCCCCCCC
Confidence 344566666677777 8999999999998762 234567777886 678987 99999987666654
No 128
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.17 E-value=5.7e-06 Score=100.93 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=34.2
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 698 EMYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 698 ~~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
++..+|||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~ 44 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRL-AGVEVVVLERLV 44 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 34568999999999999999999999 599999999986
No 129
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.17 E-value=5.4e-06 Score=102.78 Aligned_cols=54 Identities=15% Similarity=0.179 Sum_probs=42.5
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCC
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGA 336 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGa 336 (1306)
+|...+.+.|++|+.++.|++|..+++ .+.+|.+..+|...++.|+. ||.|+|.
T Consensus 133 ~L~~~a~~~Gv~i~~g~~V~~v~~~~g--~~~~V~~~~~G~~~~i~Adl-VV~AdG~ 186 (591)
T 3i3l_A 133 LLLDEARSRGITVHEETPVTDVDLSDP--DRVVLTVRRGGESVTVESDF-VIDAGGS 186 (591)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEECCST--TCEEEEEEETTEEEEEEESE-EEECCGG
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCC--CEEEEEEecCCceEEEEcCE-EEECCCC
Confidence 344445567999999999999998754 56788887677777899976 9999996
No 130
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.16 E-value=2.1e-06 Score=102.91 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=36.4
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC
Q psy1043 698 EMYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES 739 (1306)
Q Consensus 698 ~~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 739 (1306)
+|+.+|||||||+|++|+++|++|++ .|++|+|||+.+...
T Consensus 2 ~~~~~~~v~iiG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 2 HMDEEYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYYG 42 (433)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEecCCCcc
Confidence 35568999999999999999999999 599999999987654
No 131
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.16 E-value=4.3e-06 Score=102.55 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=42.9
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-CCeEEEEEEcceEEEccCCC
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-NHQRHVIRARKEVILSGGAV 337 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-~g~~~~v~A~k~VVLaAGai 337 (1306)
+|...+.+.|++|+.+++|++|..+++ ++.||.+.. +|...++.|+. ||.|+|..
T Consensus 116 ~L~~~a~~~Gv~i~~~~~V~~v~~~~~--~v~gv~~~~~dG~~~~i~ad~-VI~AdG~~ 171 (512)
T 3e1t_A 116 MLLRNSERKGVDVRERHEVIDVLFEGE--RAVGVRYRNTEGVELMAHARF-IVDASGNR 171 (512)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEETT--EEEEEEEECSSSCEEEEEEEE-EEECCCTT
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEECC--EEEEEEEEeCCCCEEEEEcCE-EEECCCcc
Confidence 344444557899999999999999766 899998875 45556789976 99999964
No 132
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.16 E-value=2.5e-06 Score=106.06 Aligned_cols=58 Identities=9% Similarity=0.145 Sum_probs=42.2
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe-----CCeE-------EEEEEcceEEEccCCCCc
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK-----NHQR-------HVIRARKEVILSGGAVNS 339 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~-----~g~~-------~~v~A~k~VVLaAGai~S 339 (1306)
+|...+++.|++|+.++.|++|+.++++ +++||.+.+ +|+. .+++|+. ||+|.|+...
T Consensus 149 ~L~~~a~~~Gv~i~~g~~v~~l~~~~~g-~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~-VV~AdG~~S~ 218 (584)
T 2gmh_A 149 WMGEQAEALGVEVYPGYAAAEILFHEDG-SVKGIATNDVGIQKDGAPKTTFERGLELHAKV-TIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECTTS-SEEEEEECCEEECTTSCEEEEEECCCEEECSE-EEECCCTTCH
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEcCCC-CEEEEEeCCccccCCCCcccccCCceEEECCE-EEEeeCCCch
Confidence 3444445569999999999999987643 788888753 3332 4688865 9999998654
No 133
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.14 E-value=5.4e-06 Score=101.98 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=45.1
Q ss_pred hHhhhhhhhcCCCc--EEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHhcCc
Q psy1043 900 AKAYLRPIIARPNL--HVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYLIP 973 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~--~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LLl~p 973 (1306)
...|+...+++.++ +|+.+++|+++..+++ .....|.+.+|+ ++.++. ||+|+|.+..|++.-.|
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~----~~~w~V~~~~G~----~~~ad~-lV~AtG~~s~p~~p~ip 155 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVEN----DRLWEVTLDNEE----VVTCRF-LISATGPLSASRMPDIK 155 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG----GTEEEEEETTTE----EEEEEE-EEECCCSCBC---CCCT
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC----CCEEEEEECCCC----EEEeCE-EEECcCCCCCCcCCCCC
Confidence 44556556666666 7889999999998752 234567778886 678987 99999988777765434
No 134
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.13 E-value=6e-06 Score=97.20 Aligned_cols=35 Identities=34% Similarity=0.475 Sum_probs=32.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..+||||||+|++|+++|+.|++ .|++|+|||+.+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~v~viE~~~ 44 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQ-NGWDVRLHEKSS 44 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 46999999999999999999999 599999999986
No 135
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.11 E-value=8.7e-06 Score=95.03 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=33.0
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
|+..|||||||+|++|+++|+.|++ .|++|+|||+.+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 47 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGM-NNISCRIIESMP 47 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 4557999999999999999999999 599999999985
No 136
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.10 E-value=8.4e-06 Score=99.39 Aligned_cols=36 Identities=31% Similarity=0.411 Sum_probs=33.1
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..++||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~ 45 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL-GGVDVMVLEQLP 45 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 357999999999999999999999 599999999986
No 137
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.10 E-value=1.9e-05 Score=95.73 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=38.1
Q ss_pred cEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHhc
Q psy1043 913 LHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVYL 971 (1306)
Q Consensus 913 ~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LLl 971 (1306)
++|+++++|++|..++ +. +.|.+.+|+ ++.|++ ||+|+......+||.
T Consensus 248 ~~i~~~~~V~~i~~~~-----~~-~~v~~~~g~----~~~ad~-vi~a~p~~~~~~l~~ 295 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSG-----SC-YSLELDNGV----TLDADS-VIVTAPHKAAAGMLS 295 (470)
T ss_dssp EEEECSCCEEEEEECS-----SS-EEEEESSSC----EEEESE-EEECSCHHHHHHHTT
T ss_pred CEEEeCCceEEEEEcC-----Ce-EEEEECCCC----EEECCE-EEECCCHHHHHHHcC
Confidence 7999999999999876 33 347777886 678987 999999877666654
No 138
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.09 E-value=3.7e-06 Score=100.52 Aligned_cols=35 Identities=31% Similarity=0.590 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||++|+++|..|++ .|++|+|||+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK-SGFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 35999999999999999999999 799999999985
No 139
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.09 E-value=1.1e-06 Score=103.99 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=32.1
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|+.|++ .|++|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 5899999999999999999999 599999999985
No 140
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.09 E-value=4.6e-06 Score=102.66 Aligned_cols=37 Identities=38% Similarity=0.583 Sum_probs=33.9
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||||||||++|+++|++|++ .|++|+|||+.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~-~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHD-SGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 46899999999999999999999 49999999998754
No 141
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.09 E-value=2.2e-05 Score=96.86 Aligned_cols=35 Identities=34% Similarity=0.477 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++||||||+|++|+++|+.|++ .|.+|+|||+.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~-~G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR-QGVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 46999999999999999999999 799999999986
No 142
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.09 E-value=1.3e-05 Score=94.99 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..+||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-AGVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 46899999999999999999999 599999999986
No 143
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.09 E-value=3.3e-06 Score=104.50 Aligned_cols=35 Identities=37% Similarity=0.443 Sum_probs=30.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~-~G~~V~VlEr~~ 82 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA-GGVGALVLEKLV 82 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH-TTCCEEEEBSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEcCCC
Confidence 36999999999999999999999 599999999986
No 144
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.08 E-value=5.9e-07 Score=106.83 Aligned_cols=35 Identities=40% Similarity=0.688 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCC--CCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIE--NWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~--G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|+.|++ . |++|+|||++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~-~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQ-LAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHh-cCCCCeEEEEeCCC
Confidence 36999999999999999999998 6 99999999984
No 145
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.08 E-value=1e-05 Score=92.94 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=32.2
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+||||||+|++|+++|+.|++ .|++|+|||+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-RQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCC
Confidence 5899999999999999999999 599999999986
No 146
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.07 E-value=1.1e-05 Score=92.24 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=31.4
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
.+||||||+|++|+++|++|++. |++|+|+|+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc
Confidence 69999999999999999999994 9999999996
No 147
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.05 E-value=6.2e-06 Score=98.58 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=31.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
||||||||.+|+++|++|++ .|++|+||||.+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~-~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-NGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCC
Confidence 89999999999999999999 79999999998643
No 148
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.05 E-value=1.7e-05 Score=96.47 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=32.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||||||||++|+++|++|++ .|++|+|||+.+..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~-~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHT-TTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCCC
Confidence 47999999999999999999999 49999999998754
No 149
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.05 E-value=4.3e-06 Score=102.70 Aligned_cols=35 Identities=37% Similarity=0.490 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||.+|+.+|..|++ .|.+|+|||+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVAR-GGLHCLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHH-CCCcEEEEEecc
Confidence 57999999999999999999999 799999999873
No 150
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.04 E-value=6.6e-06 Score=100.18 Aligned_cols=52 Identities=19% Similarity=0.315 Sum_probs=40.4
Q ss_pred hhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCc
Q psy1043 902 AYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 902 ~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai 964 (1306)
..+...+++.|++|++++.|++|..++ +++ .|.+.+|+ ++.++. ||+|+|..
T Consensus 236 ~~l~~~l~~~Gv~i~~~~~V~~i~~~~-----~~v-~v~~~~g~----~i~aD~-Vi~A~G~~ 287 (484)
T 3o0h_A 236 QLLNDAMVAKGISIIYEATVSQVQSTE-----NCY-NVVLTNGQ----TICADR-VMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEECS-----SSE-EEEETTSC----EEEESE-EEECCCEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEeeC-----CEE-EEEECCCc----EEEcCE-EEEeeCCC
Confidence 345556677899999999999998765 344 67777885 778987 99999964
No 151
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.04 E-value=4.2e-06 Score=102.80 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=46.6
Q ss_pred hHhhhhhhhcCCCc--EEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 900 AKAYLRPIIARPNL--HVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~--~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
...|+...+++.|+ +|+++++|+++..+++ +....|.+.+|+ ++.++. ||+|+|++..|++.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~----~~~~~V~~~~G~----~i~ad~-lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD----ENLWEVTTDHGE----VYRAKY-VVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETT----TTEEEEEETTSC----EEEEEE-EEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCC----CCEEEEEEcCCC----EEEeCE-EEECCcccccCCCC
Confidence 44566666677777 8999999999998862 234557777886 678887 99999987766654
No 152
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.03 E-value=3.2e-06 Score=103.08 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=32.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..+||||||||++|+++|+.|++ .|.+|+|||+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-LGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 46999999999999999999999 599999999986
No 153
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.02 E-value=9.2e-06 Score=100.27 Aligned_cols=35 Identities=37% Similarity=0.530 Sum_probs=32.9
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.++||||||+|++|+++|++|++. |++|+|||+++
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 479999999999999999999995 99999999986
No 154
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.02 E-value=1.2e-05 Score=92.31 Aligned_cols=34 Identities=38% Similarity=0.686 Sum_probs=32.1
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
..+||||||+|++|+++|.+|++ .|++|+|||+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR-AQLSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-cCCcEEEEeCC
Confidence 46999999999999999999999 49999999997
No 155
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.00 E-value=8.1e-06 Score=94.16 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=32.7
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
...+||||||+|++|+++|++|++. |++|+|||+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 3479999999999999999999994 99999999974
No 156
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.00 E-value=1.8e-05 Score=90.58 Aligned_cols=37 Identities=30% Similarity=0.511 Sum_probs=32.7
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 698 EMYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 698 ~~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
.|..+|||||||+|++|+++|++|++ .|++|+|||+.
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 48 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAAR-SGFSVAILDKA 48 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeCC
Confidence 45567999999999999999999999 49999999995
No 157
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.00 E-value=4.6e-06 Score=96.24 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+||||||+|++|+++|+.|++ .|++|+|||+.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~-~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 4799999999999999999999 799999999985
No 158
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.99 E-value=2e-05 Score=89.68 Aligned_cols=33 Identities=33% Similarity=0.498 Sum_probs=30.4
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
+|||||||+|++|+++|.+|++ .|++|+|||+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~v~li~~~ 33 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR-KGIRTGLMGER 33 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 4899999999999999999999 59999999863
No 159
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.97 E-value=2.3e-05 Score=90.31 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..+||||||+|++|+++|++|++ .|++|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGM-RGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 46999999999999999999999 599999999985
No 160
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.96 E-value=2.4e-05 Score=89.15 Aligned_cols=32 Identities=28% Similarity=0.511 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCC-EEEEECCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAG 735 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G 735 (1306)
|||||||+|++|+++|..|++ .|+ +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-GGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-CCCCcEEEEcCC
Confidence 899999999999999999999 499 99999996
No 161
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.95 E-value=2.9e-05 Score=91.96 Aligned_cols=36 Identities=22% Similarity=0.484 Sum_probs=33.3
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.++||||||+|++|+++|+.|++ .|++|+||||.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-NGIDVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-TTCEEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 357999999999999999999999 599999999986
No 162
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.95 E-value=2.5e-05 Score=95.28 Aligned_cols=37 Identities=32% Similarity=0.404 Sum_probs=34.2
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
...+|||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~ 44 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-AGVEVVVLERLV 44 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 3468999999999999999999999 799999999985
No 163
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.94 E-value=3.7e-05 Score=94.99 Aligned_cols=35 Identities=29% Similarity=0.494 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.++||||||+|++|+++|+.|++ .|.+|+||||.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~-~G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH-RQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 36999999999999999999999 599999999986
No 164
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.94 E-value=1.8e-05 Score=94.14 Aligned_cols=36 Identities=28% Similarity=0.387 Sum_probs=32.4
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCE-EEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWK-VLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~-VlVLE~G~ 736 (1306)
+..+||||||+|++|+++|+.|++ .|.+ |+||||.+
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~-~G~~~v~v~E~~~ 38 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQ-AGIGKVTLLESSS 38 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCC
Confidence 457999999999999999999999 5999 99999986
No 165
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.92 E-value=4.1e-05 Score=97.50 Aligned_cols=36 Identities=33% Similarity=0.508 Sum_probs=33.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
..+||||||+|++|+++|+.|++ .|++|+|||+.+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~ 370 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHN-FGIKVTVLEAKDR 370 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEecccc
Confidence 47999999999999999999999 4999999999864
No 166
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.92 E-value=2.6e-05 Score=96.39 Aligned_cols=35 Identities=31% Similarity=0.390 Sum_probs=30.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~-~G~~V~VlEr~~ 82 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA-GGVGALVLEKLV 82 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH-TTCCEEEEBSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEcCCC
Confidence 46999999999999999999999 799999999985
No 167
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.91 E-value=3e-05 Score=93.39 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=32.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCC--EEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNW--KVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 736 (1306)
..+||+|||||++|+++|..|++ .|. +|+|+|+.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-~G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-EKAFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCCCeEEEecCC
Confidence 46899999999999999999999 499 999999986
No 168
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.90 E-value=1.9e-05 Score=92.29 Aligned_cols=35 Identities=29% Similarity=0.480 Sum_probs=32.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCC-EEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++ .|. +|+|||+.+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-~g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-FGITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-cCCCcEEEEecCC
Confidence 36999999999999999999999 499 999999984
No 169
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.90 E-value=5.8e-06 Score=91.96 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=32.2
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
++||+|||||++|+++|+.|++ .|++|+||||.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~-~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 4899999999999999999999 599999999986
No 170
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.88 E-value=1.5e-05 Score=98.52 Aligned_cols=56 Identities=14% Similarity=0.201 Sum_probs=42.2
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCc
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai 964 (1306)
.+..+|...+.+.|++++.+ +|++|..+++ +.+++|.+.+|+ ++.|+. ||.|+|+.
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~----g~~~~v~~~~g~----~i~ad~-vV~A~G~~ 221 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNR----GYISNLLTKEGR----TLEADL-FIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT----SCEEEEEETTSC----EECCSE-EEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC----CcEEEEEECCCc----EEEeCE-EEECCCCc
Confidence 34445555666689999999 8999988641 567788888875 678986 99999975
No 171
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.85 E-value=1e-05 Score=93.68 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhCC--CCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEI--ENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~--~G~~VLvLE~G~ 113 (1306)
+||||||+|++|+++|+.|++. .|++|+||||++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 6999999999999999999982 599999999985
No 172
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.83 E-value=3.2e-05 Score=93.63 Aligned_cols=35 Identities=40% Similarity=0.667 Sum_probs=32.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|||+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~-~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAK-AKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHh-CCCeEEEEECCC
Confidence 46999999999999999999999 499999999764
No 173
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.83 E-value=9.2e-06 Score=98.97 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||||++|+++|..|++ .|.+|+|||+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-LGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 57999999999999999999999 799999999985
No 174
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.83 E-value=2.2e-05 Score=91.15 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.|||||||+|++|+.+|..|++ .|++|+|||+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-SGLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-SSCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 5899999999999999999999 799999999885
No 175
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.82 E-value=8.8e-06 Score=90.47 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
++||+|||||++|+++|+.|++ .|++|+||||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~-~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 4899999999999999999999 7999999999864
No 176
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.79 E-value=6e-05 Score=91.82 Aligned_cols=35 Identities=34% Similarity=0.480 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-GGVDVMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 57999999999999999999999 799999999985
No 177
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.79 E-value=7e-05 Score=90.39 Aligned_cols=69 Identities=13% Similarity=0.196 Sum_probs=46.6
Q ss_pred chhHhhhhhhhcCCCcE--EEecceEEEEEecCCCCCCceEEEEEEeC---CeeeeEEEEeCcEEEEcCCCcchHHHhcC
Q psy1043 898 STAKAYLRPIIARPNLH--VSLHSHAYRVHFEPGPDGQMRATGVVVKK---GRKDPVLVRARREVILSAGAIGSPQVYLI 972 (1306)
Q Consensus 898 ~~~~~~L~~~~~~~g~~--i~~~~~V~~I~~~~~~~~~~rv~GV~~~~---G~~~~~~v~A~k~VVLAAGai~sp~LLl~ 972 (1306)
.....||...+++.|++ |+++++|+.|..+++ .+. ..|.+.+ |+.. ++.++. ||+|+|.+..|.+.-.
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~---~~~-~~V~~~~~~~g~~~--~~~~d~-VVvAtG~~s~p~~p~i 173 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED---SQT-FTVTVQDHTTDTIY--SEEFDY-VVCCTGHFSTPYVPEF 173 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT---TTE-EEEEEEETTTTEEE--EEEESE-EEECCCSSSSBCCCCC
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC---CCc-EEEEEEEcCCCceE--EEEcCE-EEECCCCCCCCccCCC
Confidence 33445666666666887 999999999988751 122 3455443 5434 788987 9999998777765433
Q ss_pred c
Q psy1043 973 P 973 (1306)
Q Consensus 973 p 973 (1306)
|
T Consensus 174 p 174 (464)
T 2xve_A 174 E 174 (464)
T ss_dssp B
T ss_pred C
Confidence 3
No 178
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.79 E-value=3.1e-05 Score=97.43 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=33.5
Q ss_pred CCCccEEEECCChHHHHHHHHHHc-CCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~G~ 736 (1306)
..++||||||+|++|+++|+.|++ . |.+|+||||.+
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~ 66 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKE 66 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 357999999999999999999998 7 99999999985
No 179
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.78 E-value=6.7e-05 Score=90.76 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCC-----CEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKN-----WKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G-----~~VlVLE~G~ 736 (1306)
..|||||||+|++|+++|..|++. | .+|+|||+.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQG 68 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCC
Confidence 469999999999999999999994 9 9999999987
No 180
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.78 E-value=0.00012 Score=87.20 Aligned_cols=61 Identities=13% Similarity=0.188 Sum_probs=48.5
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
...++....++.|++|++++.|++|..++ +++++|++.+|+ ++.++. ||+|+|..-...++
T Consensus 196 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-----~~v~~v~l~dG~----~i~aD~-Vv~a~G~~p~~~l~ 256 (415)
T 3lxd_A 196 LSEFYQAEHRAHGVDLRTGAAMDCIEGDG-----TKVTGVRMQDGS----VIPADI-VIVGIGIVPCVGAL 256 (415)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEESS-----SBEEEEEESSSC----EEECSE-EEECSCCEESCHHH
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEecC-----CcEEEEEeCCCC----EEEcCE-EEECCCCccChHHH
Confidence 34455566778899999999999998776 689999998886 788987 99999976544443
No 181
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.77 E-value=7.4e-05 Score=77.51 Aligned_cols=33 Identities=42% Similarity=0.723 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
||++|||+|++|+.+|..|++ .|.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~-~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR-AGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 899999999999999999999 599999999985
No 182
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.77 E-value=4.2e-05 Score=94.53 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=42.3
Q ss_pred hHhhhhhhhcCC-CcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCc
Q psy1043 900 AKAYLRPIIARP-NLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 900 ~~~~L~~~~~~~-g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai 964 (1306)
+..+|...+.+. |++|+.+ +|++|..+++ +.+++|.+.+|+ ++.|+. ||+|+|+.
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~----g~~~~v~~~~G~----~i~ad~-vI~A~G~~ 251 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRDAN----GNIESVRTATGR----VFDADL-FVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEECTT----SCEEEEEETTSC----EEECSE-EEECCGGG
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC----CCEEEEEECCCC----EEECCE-EEECCCCc
Confidence 444555566666 9999999 9999988641 577888888885 688987 99999974
No 183
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.76 E-value=8.4e-05 Score=84.54 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=43.5
Q ss_pred hhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEe--CCeeeeEEEEeCcEEEEcCCCc
Q psy1043 903 YLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVK--KGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 903 ~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~--~G~~~~~~v~A~k~VVLAAGai 964 (1306)
++....++.|++|++++.|++|..++ +++.+|.+. +|+.. ++.++. ||+|+|..
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~~-----~~~~~v~~~~~~g~~~--~~~~D~-vv~a~G~~ 243 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGDK-----MGVAGVKVKLKDGSIR--DLNVPG-IFTFVGLN 243 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEET-----TEEEEEEEECTTSCEE--EECCSC-EEECSCEE
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcCC-----CcEEEEEEEcCCCCeE--EeecCe-EEEEEcCC
Confidence 34445568899999999999998776 688888876 77655 788987 99999964
No 184
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=1.6e-05 Score=91.58 Aligned_cols=56 Identities=9% Similarity=0.142 Sum_probs=43.6
Q ss_pred cCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHH
Q psy1043 285 KTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQIL 343 (1306)
Q Consensus 285 ~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LL 343 (1306)
.+..|++|++++.|++|..+++ ++.+|.+.+ +++..++.++. ||+|+|...++.++
T Consensus 219 ~~~~gv~i~~~~~v~~i~~~~~--~~~~v~~~~~~~g~~~~i~~D~-vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 219 EKNEKIEILYNTVALEAKGDGK--LLNALRIKNTKKNEETDLPVSG-LFYAIGHTPATKIV 276 (338)
T ss_dssp HHCTTEEEECSEEEEEEEESSS--SEEEEEEEETTTTEEEEEECSE-EEECSCEEECCGGG
T ss_pred HhcCCeEEeecceeEEEEcccC--cEEEEEEEECCCCceEEEEeCE-EEEEeCCCCChhHh
Confidence 3456999999999999987765 788898876 45567788876 99999976555444
No 185
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.75 E-value=6.5e-05 Score=92.36 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=41.1
Q ss_pred hHhhhhhhhcC-CCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCc
Q psy1043 900 AKAYLRPIIAR-PNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 900 ~~~~L~~~~~~-~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai 964 (1306)
+..+|...+.+ .|++++.+ +|++|..+++ +.+++|.+.+|. +++|+. ||.|+|+.
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~----g~~~~v~~~~g~----~i~ad~-vV~AdG~~ 232 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQH----GDIEKLITKQNG----EISGQL-FIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTT----SCEEEEEESSSC----EEECSE-EEECSGGG
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCC----CcEEEEEECCCC----EEEcCE-EEECCCcc
Confidence 44455556666 79999999 6999988641 567788887765 678986 99999874
No 186
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.74 E-value=7.9e-06 Score=96.67 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 5899999999999999999999 799999999985
No 187
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.74 E-value=2.4e-05 Score=92.71 Aligned_cols=35 Identities=23% Similarity=0.488 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGR-QGHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 36999999999999999999999 799999999985
No 188
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.72 E-value=1.6e-05 Score=96.70 Aligned_cols=35 Identities=31% Similarity=0.550 Sum_probs=32.5
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 469999999999999999999994 99999999964
No 189
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.72 E-value=7.5e-05 Score=90.61 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHhCCCC--CEEEEEcCCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIEN--WKILLLEAGGDE 115 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G--~~VLvLE~G~~~ 115 (1306)
.+||||||||.+|+++|++|++ .| ++|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~-~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER-AFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH-HCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHH-hCCCCCEEEEECCCCC
Confidence 5899999999999999999999 68 999999997643
No 190
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.70 E-value=7.2e-05 Score=85.46 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=31.5
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
..+||||||+|++|+++|++|++ .|++|+|||+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-ANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-TTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEccC
Confidence 46999999999999999999999 49999999975
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.69 E-value=0.0001 Score=90.30 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=31.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
..|||||||+|++|+++|.+|++ .|++|+|+|+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-~G~~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-KGIRTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-CCCeEEEEECC
Confidence 47999999999999999999999 59999999863
No 192
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.68 E-value=8.3e-05 Score=90.36 Aligned_cols=37 Identities=35% Similarity=0.504 Sum_probs=33.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
|+.+|||||||+|++|+++|.+|++ .|++|+|||+.+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~ 39 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYK 39 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 3347999999999999999999999 599999999975
No 193
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.68 E-value=8e-05 Score=85.82 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=32.6
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
++..+||||||+|++|+++|++|++ .|++|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAAR-AQLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHH-TTCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecC
Confidence 3457999999999999999999999 49999999975
No 194
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.67 E-value=0.00016 Score=89.17 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++||||||+|++|+++|..|++ .|.+|+|||+.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~-~G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH-RQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 46999999999999999999999 799999999985
No 195
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.67 E-value=0.00015 Score=81.64 Aligned_cols=34 Identities=32% Similarity=0.654 Sum_probs=31.7
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.|||+|||+|++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 48999999999999999999994 99999999974
No 196
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.67 E-value=2e-05 Score=89.88 Aligned_cols=34 Identities=32% Similarity=0.596 Sum_probs=32.2
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||||+||+++|.+|++ .|++|+|+|++.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~-~g~~V~liE~~~ 39 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASR-ANLKTVMIERGI 39 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 6999999999999999999999 599999999974
No 197
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.65 E-value=2.1e-05 Score=89.63 Aligned_cols=37 Identities=27% Similarity=0.289 Sum_probs=33.2
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
|.+.|||||||+|+||++||.+|++ .|++|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~-~g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGR-SSLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 3456999999999999999999999 599999999975
No 198
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.64 E-value=2.6e-05 Score=89.61 Aligned_cols=36 Identities=28% Similarity=0.473 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHc-CCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~G~ 736 (1306)
.++||+|||||++|++||++|++ ..|++|+|+||++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 37999999999999999999985 3599999999986
No 199
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.64 E-value=0.0001 Score=84.03 Aligned_cols=65 Identities=22% Similarity=0.296 Sum_probs=49.6
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHHHHhCC
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQILMLSGI 348 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGi 348 (1306)
++..+.++.|++|++++.|++|..+ + ++.+|++.+ +|+..++.++. ||+|+|...+..+|..+|+
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~-~--~~~~v~~~~~~~g~~~~~~~D~-vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD-K--VVKQVVVENLKTGEIKELNVNG-VFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES-S--SEEEEEEEETTTCCEEEEECSE-EEECCCEECCHHHHHHTTC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc-C--ceeEEEEEECCCCceEEEEcCE-EEEEECCCCChhHHhhcCe
Confidence 3334455679999999999999865 3 677888875 35556788876 9999998777778877776
No 200
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.62 E-value=8.1e-05 Score=85.61 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=31.1
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEA 734 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~ 734 (1306)
..+||||||+|++|+++|+.|++ .|++|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-AELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEec
Confidence 36999999999999999999999 4999999998
No 201
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.61 E-value=9.8e-05 Score=87.54 Aligned_cols=61 Identities=20% Similarity=0.310 Sum_probs=48.4
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
...++....++.|++|++++.|++|..++ +++.+|++.+|+ ++.++. ||+|+|..-...++
T Consensus 186 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-----~~v~~V~~~dG~----~i~aD~-Vv~a~G~~p~~~l~ 246 (404)
T 3fg2_P 186 ISSYFHDRHSGAGIRMHYGVRATEIAAEG-----DRVTGVVLSDGN----TLPCDL-VVVGVGVIPNVEIA 246 (404)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEET-----TEEEEEEETTSC----EEECSE-EEECCCEEECCHHH
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEecC-----CcEEEEEeCCCC----EEEcCE-EEECcCCccCHHHH
Confidence 34455566778899999999999998876 689999999986 778987 99999976444443
No 202
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.61 E-value=0.00023 Score=89.54 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=33.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..++||||||+|++|+++|..|++..|++|+|||+.+
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999971399999999985
No 203
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.56 E-value=2.8e-05 Score=95.37 Aligned_cols=39 Identities=21% Similarity=0.394 Sum_probs=34.9
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEESP 740 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~~ 740 (1306)
+|||||||||++||+||++|++..|++|+|||+.+....
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 699999999999999999999734999999999986543
No 204
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.54 E-value=4.9e-05 Score=88.69 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=33.3
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..++||||||+|++|+++|++|++ .|++|+||||..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~-~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILAR-KGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCEEEEEeccC
Confidence 357999999999999999999999 599999999985
No 205
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.54 E-value=0.00026 Score=84.15 Aligned_cols=64 Identities=22% Similarity=0.228 Sum_probs=49.0
Q ss_pred ccccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCCC
Q psy1043 280 FLQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIG 349 (1306)
Q Consensus 280 ~l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG 349 (1306)
++....++.|++|++++.|++|..+++ ++.+|++.+ ++ ++.++. ||+|+|..-+..+|..+|+-
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~v~l~d-G~--~i~aD~-Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEGDGT--KVTGVRMQD-GS--VIPADI-VIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEESSS--BEEEEEESS-SC--EEECSE-EEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEecCC--cEEEEEeCC-CC--EEEcCE-EEECCCCccChHHHHhCCCC
Confidence 343445677999999999999987655 788888744 32 578876 99999987777788888764
No 206
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.54 E-value=0.00018 Score=87.02 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC-----CEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN-----WKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G-----~~VLvLE~G~~ 114 (1306)
..|||||||+|++|+++|..|++ .| .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~-~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQE-RAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHH-HHHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-cccccCcccEEEEecCCC
Confidence 46999999999999999999999 68 99999999863
No 207
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.54 E-value=3.3e-05 Score=88.04 Aligned_cols=34 Identities=35% Similarity=0.602 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||||+||+++|.+|++ .|++|+|+|++.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~-~g~~V~liE~~~ 39 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASR-ANLKTVMIERGI 39 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 7999999999999999999999 799999999874
No 208
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.53 E-value=4e-05 Score=88.03 Aligned_cols=37 Identities=30% Similarity=0.450 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~~ 114 (1306)
.++||||||||++|+++|++|++ ..|++|+|+|+++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 47999999999999999999985 36999999999864
No 209
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.50 E-value=3.8e-05 Score=87.23 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+.|||||||||+||+++|.+|++ .|++|+|+|++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar-~g~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGR-ARKQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 57999999999999999999999 799999999874
No 210
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.49 E-value=4.1e-05 Score=87.22 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=33.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+.|||||||||+||+++|.+|++ .|++|+|+|++.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~-~g~~v~liE~~~ 37 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGR-SSLKPVMYEGFM 37 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 456999999999999999999999 799999999874
No 211
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.48 E-value=0.0003 Score=83.33 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.|+|||+|++|+++|+.|++ .|++|+|+||.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~-~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK-HGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 59999999999999999999 599999999975
No 212
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.46 E-value=6.5e-05 Score=90.43 Aligned_cols=41 Identities=24% Similarity=0.443 Sum_probs=36.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD 117 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~ 117 (1306)
+..+|||||||||.+|+++|.+|++ .|++|+|||+.+....
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~-~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCCCCCc
Confidence 4467999999999999999999999 7999999999987553
No 213
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.46 E-value=0.00012 Score=90.06 Aligned_cols=35 Identities=37% Similarity=0.576 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||||++|+.+|.+|++ .|.+|+|||+++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-~g~~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-AGMKVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 46999999999999999999998 799999999985
No 214
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.41 E-value=0.00016 Score=88.79 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHh-CCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLS-EIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLa-e~~G~~VLvLE~G~ 113 (1306)
.++||||||||++|+.+|.+|+ + .|.+|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCC
Confidence 3699999999999999999999 7 799999999985
No 215
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.39 E-value=8.6e-05 Score=87.73 Aligned_cols=39 Identities=33% Similarity=0.542 Sum_probs=34.9
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCC-CCEEEEECCCCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQK-NWKVLLLEAGGEE 738 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~-G~~VlVLE~G~~~ 738 (1306)
|.+++||||||||++|+++|++|++ . |++|+|||+.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~-~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVAT-QLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHH-HSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCCCC
Confidence 3457999999999999999999999 6 9999999999744
No 216
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.38 E-value=0.00063 Score=82.79 Aligned_cols=62 Identities=16% Similarity=0.159 Sum_probs=44.0
Q ss_pred hhHhhhhhhhcCCCcEEEecceEEEEEecCCCCCC--ceEEEEEEeC---CeeeeEEEEeCcEEEEcCCC
Q psy1043 899 TAKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQ--MRATGVVVKK---GRKDPVLVRARREVILSAGA 963 (1306)
Q Consensus 899 ~~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~--~rv~GV~~~~---G~~~~~~v~A~k~VVLAAGa 963 (1306)
....||..++++.+..|+++++|++|..+...+.. ....-|++.+ |+.. ++.|+. ||+|+|.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~--~~~ar~-vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEIS--ARRTRK-VVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEE--EEEEEE-EEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEE--EEEeCE-EEECcCC
Confidence 45678888888888889999999999876532111 1245566544 4444 788977 9999995
No 217
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.35 E-value=0.00011 Score=85.82 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=33.4
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..++||||||+|.+|+++|++|++ .|++|+|||+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~-~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILAR-KGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCEEEEEeccC
Confidence 357999999999999999999999 799999999985
No 218
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.35 E-value=6.7e-05 Score=91.99 Aligned_cols=40 Identities=25% Similarity=0.448 Sum_probs=35.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD 117 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~ 117 (1306)
..+||||||||.+|+++|++|++..|++|+|||+.+....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 3699999999999999999999745999999999876543
No 219
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.30 E-value=0.00012 Score=86.91 Aligned_cols=36 Identities=28% Similarity=0.255 Sum_probs=32.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+.|||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-SGIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 467999999999999999999999 799999999985
No 220
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.29 E-value=0.00052 Score=83.46 Aligned_cols=34 Identities=35% Similarity=0.525 Sum_probs=31.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
..+||||||+|++|+++|++|++ . ++|+|||+++
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~-~-~~V~vie~~~ 140 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQ-Y-LTVALIEERG 140 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTT-T-CCEEEECTTS
T ss_pred ccCCEEEECccHHHHHHHHHHHh-c-CCEEEEeCCC
Confidence 46899999999999999999999 5 9999999986
No 221
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.28 E-value=0.0004 Score=84.05 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=30.5
Q ss_pred CccEEEECCChHHHHHHHHHHc-CCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~G~ 736 (1306)
..||||||+|++|+++|.+|++ .+|.+|+|+|+.+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4799999999999999999998 2389999999986
No 222
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.27 E-value=0.00013 Score=87.11 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=37.0
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC
Q psy1043 75 PLYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD 117 (1306)
Q Consensus 75 ~~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~ 117 (1306)
.+.++|||||||+|.+|+++|.+|++ .|++|+|||+++....
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~-~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSH-YGKKILVLDRNPYYGG 57 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCG
T ss_pred cccccCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeccCCCCC
Confidence 35578999999999999999999999 7999999999986543
No 223
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.26 E-value=0.0013 Score=77.68 Aligned_cols=63 Identities=11% Similarity=0.236 Sum_probs=48.6
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCCC
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIG 349 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG 349 (1306)
+....++.|++|++++.|++|..+++ ++.+|.+.+ ++ ++.++. ||+|+|..-+..++..+|+.
T Consensus 190 l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~V~~~d-G~--~i~aD~-Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 190 FHDRHSGAGIRMHYGVRATEIAAEGD--RVTGVVLSD-GN--TLPCDL-VVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT--EEEEEEETT-SC--EEECSE-EEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHhCCcEEEECCEEEEEEecCC--cEEEEEeCC-CC--EEEcCE-EEECcCCccCHHHHHhCCCC
Confidence 33445677999999999999987765 788887643 33 577876 99999987777788888774
No 224
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.26 E-value=0.00012 Score=84.90 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHcCCC------CEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKN------WKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G------~~VlVLE~G~ 736 (1306)
||||||+|++|+++|++|++. | ++|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 899999999999999999994 7 9999999985
No 225
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.23 E-value=0.00046 Score=83.18 Aligned_cols=62 Identities=11% Similarity=0.204 Sum_probs=41.1
Q ss_pred ccccccCCCCeE--EEeccEEEEEEecCCCCeEEEEEEEe--CCeEEEEEEcceEEEccCCCCcHHHH
Q psy1043 280 FLQPVKTRPNLH--ISLHSHVTKVLIDPKNRMAIGVEFVK--NHQRHVIRARKEVILSGGAVNSPQIL 343 (1306)
Q Consensus 280 ~l~~~~~~~nl~--I~~~~~V~~I~~d~~~~~~~GV~~~~--~g~~~~v~A~k~VVLaAGai~Sp~LL 343 (1306)
|+...+++.|++ |+.++.|++|..++++. ...|.+.+ ++...++.++. ||+|+|....|++.
T Consensus 106 ~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~-~~~V~~~~~~~g~~~~~~~d~-VVvAtG~~s~p~~p 171 (464)
T 2xve_A 106 YIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ-TFTVTVQDHTTDTIYSEEFDY-VVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHHHTCGGGEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEESE-EEECCCSSSSBCCC
T ss_pred HHHHHHHHcCCcceEEeCCEEEEEEEcCCCC-cEEEEEEEcCCCceEEEEcCE-EEECCCCCCCCccC
Confidence 343333444566 88899999998875432 23455544 35556788876 99999987777654
No 226
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.22 E-value=0.00018 Score=84.02 Aligned_cols=35 Identities=43% Similarity=0.687 Sum_probs=32.4
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
+|||+|||+|++|+++|++|++. |++|+|||+++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~ 35 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNH 35 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCC
Confidence 48999999999999999999995 999999999864
No 227
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.21 E-value=0.00014 Score=86.96 Aligned_cols=34 Identities=47% Similarity=0.690 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
|||||||||++|+++|++|++ .|++|+|||+.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~-~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN-AGKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-cCCeEEEEecCCC
Confidence 899999999999999999999 7999999999654
No 228
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.21 E-value=0.00015 Score=88.32 Aligned_cols=36 Identities=31% Similarity=0.529 Sum_probs=31.5
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.+|||||||+|++|+++|.+|++ .|++|+|||+.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 58 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQ-LGMKVAVVEKRS 58 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 456999999999999999999999 599999999975
No 229
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.19 E-value=0.00058 Score=85.12 Aligned_cols=36 Identities=36% Similarity=0.537 Sum_probs=32.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~ 736 (1306)
...||||||+|++|+++|.+|++. +|.+|+|+|+.+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 458999999999999999999982 389999999986
No 230
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.18 E-value=0.0002 Score=87.49 Aligned_cols=35 Identities=34% Similarity=0.646 Sum_probs=32.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-+||+||||+|++|.++|.++++ .|+||+|||+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~-~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAA-HGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 36999999999999999999999 499999999975
No 231
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.17 E-value=0.00089 Score=80.51 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHc-CCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~G~ 736 (1306)
.||||||+|++|+++|.+|++ .+|.+|+|||+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 599999999999999999998 2389999999986
No 232
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.14 E-value=0.00026 Score=82.77 Aligned_cols=37 Identities=32% Similarity=0.636 Sum_probs=34.0
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||+|||+|++|+++|++|++. |.+|+|||+.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCC
Confidence 579999999999999999999994 9999999998754
No 233
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.13 E-value=0.0002 Score=84.62 Aligned_cols=39 Identities=28% Similarity=0.546 Sum_probs=34.9
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCC-CCEEEEEcCCCCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIE-NWKILLLEAGGDE 115 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~-G~~VLvLE~G~~~ 115 (1306)
|.+++||||||||.+|+++|++|++ . |++|+|||+.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~-~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVAT-QLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHH-HSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCCCC
Confidence 3357999999999999999999998 6 9999999998754
No 234
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.13 E-value=0.00033 Score=85.21 Aligned_cols=39 Identities=36% Similarity=0.470 Sum_probs=35.1
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES 739 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 739 (1306)
...+||||||||++|+++|++|++ .|++|+|||+.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK-AGYKVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeccCCCC
Confidence 457899999999999999999999 599999999997653
No 235
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.10 E-value=0.00024 Score=77.06 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+.+|..|++ .|.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-KGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 6999999999999999999999 799999999983
No 236
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.06 E-value=0.00023 Score=86.32 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=32.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|++|++ .|++|+|||+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-HTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCC
Confidence 46999999999999999999999 499999999985
No 237
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.06 E-value=0.00044 Score=80.14 Aligned_cols=37 Identities=32% Similarity=0.496 Sum_probs=33.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC-CCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG-GEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G-~~~ 738 (1306)
..+||+|||||++|+++|++|++ .|++|+|||+. +..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~-~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR-AGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-TSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCcEEEEecccccc
Confidence 46899999999999999999999 59999999998 543
No 238
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.06 E-value=0.00038 Score=82.97 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=34.2
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCC-CEEEEECCCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKN-WKVLLLEAGGEES 739 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G-~~VlVLE~G~~~~ 739 (1306)
..+||||||||++|+++|++|++ .| ++|+|+|+.+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~-~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ-AGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEECCCCCC
Confidence 46899999999999999999999 49 8999999987653
No 239
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.03 E-value=0.00043 Score=84.61 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=34.1
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES 739 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 739 (1306)
|...+||||||||++|+++|++|++ .|++|+|||+.+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHT-TSCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEeCCCCC
Confidence 4456999999999999999999999 599999999997653
No 240
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.03 E-value=0.00026 Score=86.74 Aligned_cols=38 Identities=26% Similarity=0.420 Sum_probs=34.2
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCC-CEEEEECCCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKN-WKVLLLEAGGEES 739 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G-~~VlVLE~G~~~~ 739 (1306)
..+||||||||++|+++|++|++ .| ++|+|||+.+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~-~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ-NGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH-TTCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCCCCC
Confidence 36899999999999999999999 49 9999999987543
No 241
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.00 E-value=0.00036 Score=81.58 Aligned_cols=37 Identities=32% Similarity=0.664 Sum_probs=34.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..|||||||||++|+++|.+|++ .|.+|+|||+.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLAS-SGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-CCCceEEEeccCCC
Confidence 57999999999999999999999 69999999998653
No 242
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.00 E-value=0.00033 Score=81.63 Aligned_cols=36 Identities=44% Similarity=0.676 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
+||+||||||.+|+++|.+|++ .|++|+|||+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKK-LNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGG-GTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-CCCcEEEEecCCCC
Confidence 4899999999999999999999 69999999998653
No 243
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.00 E-value=0.00027 Score=81.92 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCC------CEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIEN------WKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G------~~VLvLE~G~ 113 (1306)
||||||||.+|+++|+.|++ .| ++|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~-~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHE-RYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHH-hccccCCCceEEEEECCC
Confidence 89999999999999999999 56 9999999984
No 244
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.97 E-value=0.00048 Score=81.32 Aligned_cols=35 Identities=17% Similarity=0.412 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQ-NGIDVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-TTCEEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 57999999999999999999999 799999999985
No 245
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.97 E-value=0.00037 Score=84.13 Aligned_cols=33 Identities=36% Similarity=0.537 Sum_probs=31.4
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
+|||||||+|++|+++|++|++ .|++|+|||++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-~G~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-LGKKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-CCCEEEEEeCC
Confidence 6999999999999999999999 49999999994
No 246
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.94 E-value=0.00051 Score=82.04 Aligned_cols=41 Identities=24% Similarity=0.387 Sum_probs=36.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDETD 117 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~~ 117 (1306)
|..+||+||||+|.+|+++|.+|++ .|++|+|||+.+....
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYYGG 43 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEecCCCccc
Confidence 4467999999999999999999999 7999999999876543
No 247
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.94 E-value=0.00064 Score=82.72 Aligned_cols=39 Identities=28% Similarity=0.399 Sum_probs=35.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET 116 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~ 116 (1306)
...+||||||||.+|+++|++|++ .|++|+|||+.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK-AGYKVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeccCCCC
Confidence 457899999999999999999999 799999999987643
No 248
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.93 E-value=0.00057 Score=83.29 Aligned_cols=36 Identities=39% Similarity=0.668 Sum_probs=33.2
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
++||||||+|++|+++|++|++ .|++|+|||+.+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTV-AGFKTLLLEARDRI 74 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSBS
T ss_pred CCCEEEECCcHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 4999999999999999999999 49999999998754
No 249
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.93 E-value=0.0014 Score=81.31 Aligned_cols=34 Identities=24% Similarity=0.488 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~ 736 (1306)
.||||||+|++|+++|.+|++. .|.+|+|+|+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4899999999999999999982 389999999986
No 250
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.92 E-value=0.00047 Score=83.75 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=32.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|||++.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 42 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVL-NGARVACLDFVK 42 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCEEEEEEecc
Confidence 47999999999999999999999 599999999763
No 251
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.91 E-value=0.00036 Score=84.68 Aligned_cols=36 Identities=36% Similarity=0.650 Sum_probs=32.9
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+..|||||||+|++|+++|.+|++. |++|+|||++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 3479999999999999999999994 99999999874
No 252
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.91 E-value=0.00048 Score=82.90 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=33.8
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
.++||||||+|++|+++|++|++. |++|+|||+.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 368999999999999999999994 9999999998754
No 253
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.91 E-value=0.00043 Score=84.91 Aligned_cols=37 Identities=30% Similarity=0.500 Sum_probs=33.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||||||||.+|+++|.+|++ .|++|+|||+.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~-~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHD-SGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 46899999999999999999999 79999999998654
No 254
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.90 E-value=0.00035 Score=84.65 Aligned_cols=35 Identities=34% Similarity=0.496 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||++|+++|.+|++ .|++|+|+|+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-HTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCC
Confidence 47999999999999999999999 799999999985
No 255
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.90 E-value=0.00044 Score=82.52 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.5
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+||||||+|++|+++|+.|++ .|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~-~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ-HDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 4899999999999999999999 599999999985
No 256
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.90 E-value=0.00047 Score=83.18 Aligned_cols=35 Identities=31% Similarity=0.615 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAA-FGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCcEEEEcCCC
Confidence 47999999999999999999999 599999999974
No 257
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.90 E-value=0.00048 Score=84.12 Aligned_cols=35 Identities=26% Similarity=0.563 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
-+||+||||+|++|.++|.++++ .|+||+|+|+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~-~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAA-HGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 36999999999999999999999 799999999875
No 258
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.89 E-value=0.00052 Score=84.00 Aligned_cols=36 Identities=31% Similarity=0.581 Sum_probs=33.2
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.+|||||||+|++|+++|.+|++ .|++|+|||+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~-~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQ-YGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeccC
Confidence 457999999999999999999999 499999999975
No 259
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.89 E-value=0.00041 Score=79.16 Aligned_cols=36 Identities=25% Similarity=0.496 Sum_probs=32.7
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
|..+|||||||+|++|+++|..|++ .|++|+|||+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAAR-SGFSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeCC
Confidence 4567999999999999999999999 79999999985
No 260
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.89 E-value=0.00039 Score=82.50 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCE-EEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWK-ILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~-VLvLE~G~ 113 (1306)
..|||||||||++|+++|..|++ .|++ |+|||+.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQ-AGIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCC
Confidence 46899999999999999999999 7999 99999985
No 261
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.88 E-value=0.00046 Score=82.89 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHh-CCCeEEEEcCCC
Confidence 46999999999999999999999 599999999974
No 262
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=96.88 E-value=0.00057 Score=80.11 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~-~G~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ-NGWDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCCEEEEecCC
Confidence 6899999999999999999999 799999999986
No 263
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.87 E-value=0.00062 Score=82.24 Aligned_cols=36 Identities=31% Similarity=0.453 Sum_probs=33.2
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+..|||||||+|++|+++|.+|++ .|++|+|||++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVE-QGAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 357999999999999999999999 599999999984
No 264
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.86 E-value=0.00045 Score=83.89 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
.+|||||||||++|+++|.+|++ .|++|+|||++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGA-LGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CcCEEEEEeCC
Confidence 47999999999999999999999 79999999995
No 265
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.85 E-value=0.00063 Score=77.58 Aligned_cols=34 Identities=32% Similarity=0.279 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
+||||||+|.+|+.+|+.|++ .|.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~-~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR-LGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHH-CCCcEEEEeccCC
Confidence 799999999999999999999 5999999999863
No 266
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.84 E-value=0.0032 Score=73.74 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+..-|||||+|++|+.+|.+|.. .+.+|+|+|+.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~ 42 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG-KCDDITMINSEK 42 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCC
Confidence 35679999999999999999966 699999999986
No 267
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.84 E-value=0.00071 Score=79.33 Aligned_cols=37 Identities=30% Similarity=0.549 Sum_probs=33.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
+++||+|||+|++|+++|++|++ .|++|+|+|+.+..
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRDHI 38 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEEecCCc
Confidence 35899999999999999999999 49999999998754
No 268
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.84 E-value=0.00052 Score=83.47 Aligned_cols=34 Identities=32% Similarity=0.529 Sum_probs=32.0
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~-~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK-HTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-TCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 5999999999999999999999 599999999975
No 269
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.82 E-value=0.00044 Score=83.53 Aligned_cols=35 Identities=37% Similarity=0.684 Sum_probs=32.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|||+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~-~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAK-AKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHh-CCCeEEEEECCC
Confidence 46999999999999999999999 799999999764
No 270
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.82 E-value=0.0007 Score=82.98 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=34.0
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
++.+|||||||+|++|+++|.+|++. |++|+|||+++
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 34579999999999999999999995 99999999986
No 271
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.81 E-value=0.00073 Score=80.48 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC-CEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN-WKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G-~~VLvLE~G~~~ 115 (1306)
..+||||||||.+|+++|++|++ .| ++|+|||+.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~-~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ-AGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEECCCCC
Confidence 46899999999999999999999 69 899999998654
No 272
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.00056 Score=82.87 Aligned_cols=35 Identities=46% Similarity=0.752 Sum_probs=32.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-YGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 47999999999999999999999 599999999974
No 273
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.80 E-value=0.00054 Score=83.40 Aligned_cols=35 Identities=31% Similarity=0.547 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||++|+++|.+|++ .|++|+|+|+.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 58 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQ-LGMKVAVVEKRS 58 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 46999999999999999999999 799999999864
No 274
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.79 E-value=0.0006 Score=82.85 Aligned_cols=35 Identities=29% Similarity=0.505 Sum_probs=32.4
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 469999999999999999999994 99999999964
No 275
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.79 E-value=0.00068 Score=82.18 Aligned_cols=37 Identities=30% Similarity=0.423 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||||||||.+|+++|++|++ .|++|+|||+.+..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~-~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHT-TTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCCC
Confidence 47899999999999999999999 79999999998754
No 276
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.79 E-value=0.00074 Score=79.70 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-AGVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 36899999999999999999999 799999999985
No 277
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.78 E-value=0.00081 Score=77.92 Aligned_cols=36 Identities=33% Similarity=0.572 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC-CC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG-GD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G-~~ 114 (1306)
..+||+|||||++|+++|++|++ .|++|+|||+. +.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~-~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR-AGHDVTILEANANR 79 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-TSCEEEEECSCSSC
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCcEEEEeccccc
Confidence 46899999999999999999999 79999999998 53
No 278
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.78 E-value=0.00079 Score=81.57 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC--EEEEEcCCCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENW--KILLLEAGGDE 115 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~--~VLvLE~G~~~ 115 (1306)
+||||||||.+|+++|++|++ .|. +|+|||+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-APCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-SSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-CCCCCcEEEEeCCCCC
Confidence 699999999999999999999 799 99999997653
No 279
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.77 E-value=0.00064 Score=82.03 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
.+|||||||||++|+++|.+|++ .|++|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~-~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAA-LGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHh-CCCEEEEEeCC
Confidence 36999999999999999999999 79999999994
No 280
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.75 E-value=0.00094 Score=81.56 Aligned_cols=40 Identities=25% Similarity=0.369 Sum_probs=34.1
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET 116 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~ 116 (1306)
+...+||||||||.+|+++|++|++ .|++|+|||+.+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHT-TSCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEeCCCCC
Confidence 3457999999999999999999999 799999999987643
No 281
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.74 E-value=0.00067 Score=82.48 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+||+||||||++|+++|.+|++ .|++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~-~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK-HTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-TCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 5999999999999999999999 799999999874
No 282
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.73 E-value=0.00071 Score=78.64 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=32.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
...|||||||+|++|+++|..|++ .|++|+|||+.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 47 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGM-NNISCRIIESMP 47 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 357999999999999999999998 799999999985
No 283
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.73 E-value=0.0007 Score=82.19 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~-~G~~V~liEk~~ 42 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVL-NGARVACLDFVK 42 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCEEEEEEecc
Confidence 57999999999999999999999 799999999764
No 284
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.72 E-value=0.00051 Score=82.98 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHhCCCC------CEEEEEcCCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIEN------WKILLLEAGGDE 115 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G------~~VLvLE~G~~~ 115 (1306)
.+||||||||.+|+++|++|++ .| ++|+|||+.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~-~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEK-EIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HHTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHH-hccccCCCCCEEEEECCCCC
Confidence 5899999999999999999999 68 999999998653
No 285
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.71 E-value=0.00069 Score=81.79 Aligned_cols=34 Identities=32% Similarity=0.499 Sum_probs=31.9
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++. |++|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 59999999999999999999994 99999999973
No 286
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.70 E-value=0.00076 Score=69.74 Aligned_cols=33 Identities=39% Similarity=0.664 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
||++|||+|++|+.+|..|++ .|.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~-~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR-AGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 899999999999999999999 799999999985
No 287
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.70 E-value=0.00082 Score=78.84 Aligned_cols=32 Identities=31% Similarity=0.651 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHcCC--CCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQK--NWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~--G~~VlVLE~G~ 736 (1306)
||||||+|++|+++|+.|++ . |++|+||||.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~-~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQ-ARPLWAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHh-cCCCCCEEEEECCC
Confidence 89999999999999999998 5 99999999986
No 288
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.70 E-value=0.0007 Score=80.78 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+||||||+|++|+++|..|++ .|++|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~-~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ-HDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 4899999999999999999999 799999999985
No 289
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.70 E-value=0.00063 Score=83.37 Aligned_cols=38 Identities=32% Similarity=0.426 Sum_probs=34.2
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC-CEEEEEcCCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN-WKILLLEAGGDET 116 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G-~~VLvLE~G~~~~ 116 (1306)
..+||||||||.+|+++|.+|++ .| ++|+|||+.+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~-~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ-NGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH-TTCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCCCCC
Confidence 36899999999999999999998 79 9999999987543
No 290
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.70 E-value=0.00075 Score=81.06 Aligned_cols=35 Identities=37% Similarity=0.556 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..||+||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHh-CCCeEEEEcCCC
Confidence 46999999999999999999999 799999999973
No 291
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.68 E-value=0.0033 Score=76.46 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=39.1
Q ss_pred hhccccccCCCCeEEEeccEEEEEEecCCCC-----eEEEEEEEe--CCeEEEEEEcceEEEccC
Q psy1043 278 KAFLQPVKTRPNLHISLHSHVTKVLIDPKNR-----MAIGVEFVK--NHQRHVIRARKEVILSGG 335 (1306)
Q Consensus 278 ~~~l~~~~~~~nl~I~~~~~V~~I~~d~~~~-----~~~GV~~~~--~g~~~~v~A~k~VVLaAG 335 (1306)
..||..++++-+..|..+++|++|..+..+. ...-|+..+ .+...++.|+. ||+|+|
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~-vVlatG 211 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRK-VVIAIG 211 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEE-EEECCC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCE-EEECcC
Confidence 3466666666667799999999998755321 123444443 45667888976 999999
No 292
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.68 E-value=0.00076 Score=81.32 Aligned_cols=35 Identities=29% Similarity=0.562 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAA-FGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCcEEEEcCCC
Confidence 47999999999999999999999 799999999873
No 293
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.67 E-value=0.00065 Score=83.16 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=42.3
Q ss_pred hHhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCc
Q psy1043 900 AKAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAI 964 (1306)
Q Consensus 900 ~~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai 964 (1306)
+..+|...+.+.|++++.+ +|++|..+++ +++++|++.+|+ ++.|+. ||.|+|+.
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~----~~~~~v~~~~g~----~~~ad~-vV~A~G~~ 229 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDER----GWISGVHTKQHG----EISGDL-FVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT----SCEEEEEESSSC----EEECSE-EEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCC----CCEEEEEECCCC----EEEcCE-EEECCCcc
Confidence 4445555666689999999 9999988541 577888888885 688986 99999874
No 294
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.66 E-value=0.00082 Score=80.80 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
.++||||||+|.+|+++|.+|++ .|++|+|||+.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRK-AGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCC
Confidence 36899999999999999999999 69999999998654
No 295
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.66 E-value=0.0009 Score=80.86 Aligned_cols=34 Identities=35% Similarity=0.613 Sum_probs=32.1
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 59999999999999999999994 99999999985
No 296
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.65 E-value=0.00076 Score=81.95 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||||++|+++|.+|++ .|++|+|+|+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~-~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQ-LGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEEecc
Confidence 47999999999999999999999 799999999864
No 297
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.64 E-value=0.00081 Score=76.86 Aligned_cols=34 Identities=32% Similarity=0.617 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
..|||||||+|++|+.+|.+|++ .|++|+|||+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR-AQLSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-cCCcEEEEeCC
Confidence 46999999999999999999999 79999999987
No 298
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.64 E-value=0.00083 Score=75.44 Aligned_cols=34 Identities=35% Similarity=0.606 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.|||||||+|++|+.+|.+|++ .|++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR-ARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 4899999999999999999999 799999999874
No 299
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.64 E-value=0.00095 Score=76.10 Aligned_cols=34 Identities=32% Similarity=0.256 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
+||||||+|.+|+.+|..|++ .|.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~-~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR-LGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHH-CCCcEEEEeccCC
Confidence 699999999999999999999 7999999999863
No 300
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.63 E-value=0.00085 Score=81.74 Aligned_cols=37 Identities=35% Similarity=0.541 Sum_probs=33.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
+++||||||+|.+|+++|.+|++ .|++|+|||+.+..
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTV-AGFKTLLLEARDRI 74 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHH-TTCCEEEECSSSBS
T ss_pred cCCCEEEECCcHHHHHHHHHHHH-CCCCEEEEeCCCCC
Confidence 34999999999999999999999 79999999998654
No 301
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.62 E-value=0.00096 Score=81.62 Aligned_cols=36 Identities=28% Similarity=0.507 Sum_probs=33.2
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+|||||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~-~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQ-YGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeccC
Confidence 357999999999999999999999 799999999974
No 302
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.62 E-value=0.00087 Score=76.92 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..|||||||+|++|+.+|.+|++ .|++|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGM-RGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 46999999999999999999998 799999999985
No 303
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.62 E-value=0.001 Score=81.03 Aligned_cols=34 Identities=47% Similarity=0.760 Sum_probs=32.0
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 4999999999999999999999 599999999985
No 304
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.61 E-value=0.00098 Score=80.21 Aligned_cols=34 Identities=35% Similarity=0.535 Sum_probs=31.9
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCC
Confidence 48999999999999999999994 99999999985
No 305
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.61 E-value=0.0011 Score=80.02 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=32.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..|||||||+|++|+.+|.+|++ .|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE-QGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 57999999999999999999999 799999999873
No 306
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.59 E-value=0.0012 Score=80.87 Aligned_cols=38 Identities=26% Similarity=0.310 Sum_probs=34.5
Q ss_pred CCCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 75 PLYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 75 ~~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+...|||||||||++|+++|.+|++ .|++|+|||++.
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~ 76 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWP 76 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCC
Confidence 34568999999999999999999999 699999999985
No 307
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.57 E-value=0.0016 Score=80.16 Aligned_cols=40 Identities=20% Similarity=0.397 Sum_probs=36.4
Q ss_pred CCCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEES 739 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~~ 739 (1306)
++.+|||||||+|..|+++|..|++. |++||+|||.+++.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCccc
Confidence 44589999999999999999999994 99999999998764
No 308
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.56 E-value=0.001 Score=76.06 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+||||||+|++|+.+|..|++ .|++|+|||+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-RQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCC
Confidence 5899999999999999999999 799999999985
No 309
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.56 E-value=0.0014 Score=79.95 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=33.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||||||+|++|+++|+.|++ .|.+|+|||+.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~-~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG-AGHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCC
Confidence 36899999999999999999999 49999999998754
No 310
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.53 E-value=0.001 Score=81.08 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=32.0
Q ss_pred CccEEEECCChHHHHHHHHHHcCC---CCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQK---NWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~---G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|++|++ . |++|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAAT-SHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCcCEEEEEeCCC
Confidence 4899999999999999999998 5 99999999985
No 311
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.53 E-value=0.001 Score=80.52 Aligned_cols=35 Identities=31% Similarity=0.569 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-LGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecCC
Confidence 47999999999999999999999 799999999763
No 312
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.52 E-value=0.0011 Score=80.53 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=30.9
Q ss_pred CCccEEEECCChHHHHHHHHHHc-CCCCEEEEECC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEA 734 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~ 734 (1306)
.+|||||||+|++|+++|++|++ . |++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEec
Confidence 36999999999999999999998 7 999999994
No 313
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.52 E-value=0.0011 Score=79.99 Aligned_cols=35 Identities=34% Similarity=0.602 Sum_probs=32.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 469999999999999999999994 99999999985
No 314
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.52 E-value=0.0011 Score=80.26 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=32.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 369999999999999999999994 99999999985
No 315
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.51 E-value=0.0016 Score=76.20 Aligned_cols=36 Identities=25% Similarity=0.535 Sum_probs=33.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
++|++|||+|.+|+++|.+|++ .|++|+|+|+.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCcEEEEEecCCc
Confidence 4899999999999999999999 69999999998654
No 316
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.51 E-value=0.0013 Score=79.57 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=33.5
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCC-CEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKN-WKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G-~~VlVLE~G~~~ 738 (1306)
..+||+|||+|++|+++|++|++. | .+|+|+|+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 469999999999999999999995 8 799999998754
No 317
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.49 E-value=0.00098 Score=80.81 Aligned_cols=36 Identities=31% Similarity=0.485 Sum_probs=33.0
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+|||||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~ 39 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 347999999999999999999999 799999999964
No 318
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.49 E-value=0.0012 Score=79.74 Aligned_cols=34 Identities=41% Similarity=0.651 Sum_probs=32.1
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-LGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 6999999999999999999999 499999999975
No 319
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.49 E-value=0.0014 Score=74.24 Aligned_cols=32 Identities=31% Similarity=0.510 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEA 111 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~ 111 (1306)
+|||||||+|++|+.+|.+|++ .|++|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR-KGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-TTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeC
Confidence 4899999999999999999999 7999999985
No 320
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0011 Score=80.46 Aligned_cols=35 Identities=40% Similarity=0.651 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-YGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 47999999999999999999999 799999999974
No 321
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.47 E-value=0.0013 Score=77.01 Aligned_cols=33 Identities=36% Similarity=0.712 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhCCC--CCEEEEEcCCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIE--NWKILLLEAGGD 114 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~--G~~VLvLE~G~~ 114 (1306)
||||||+|++|+++|..|++ . |++|+|||+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~-~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQ-ARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHh-cCCCCCEEEEECCCC
Confidence 89999999999999999998 5 999999999863
No 322
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.46 E-value=0.0013 Score=79.25 Aligned_cols=34 Identities=38% Similarity=0.548 Sum_probs=31.9
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+|||||||+|++|+++|.+|++. |++|+|+|+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 58999999999999999999995 99999999973
No 323
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.46 E-value=0.0013 Score=79.58 Aligned_cols=34 Identities=29% Similarity=0.529 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-LGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 5999999999999999999999 799999999985
No 324
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.46 E-value=0.001 Score=80.93 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=32.3
Q ss_pred CCCCccEEEECCChHHHHHHHHHHc-CCCCEEEEECCC
Q psy1043 699 MYPEYDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEAG 735 (1306)
Q Consensus 699 ~~~~yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~G 735 (1306)
|..+|||||||+|++|+++|++|++ . |++|+|+|+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~ 40 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQ 40 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESC
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecc
Confidence 3347999999999999999999998 7 9999999953
No 325
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.45 E-value=0.00086 Score=81.29 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 46999999999999999999999 699999999964
No 326
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.45 E-value=0.0012 Score=74.76 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-EEEEEcCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENW-KILLLEAG 112 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~-~VLvLE~G 112 (1306)
|||||||+|++|+.+|..|++ .|+ +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-GGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-TTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-CCCCcEEEEcCC
Confidence 899999999999999999998 799 99999986
No 327
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.44 E-value=0.0014 Score=82.50 Aligned_cols=34 Identities=38% Similarity=0.603 Sum_probs=32.3
Q ss_pred CccEEEECCChHHHHHHHHHHc-----CCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSE-----QKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae-----~~G~~VlVLE~G~ 736 (1306)
++||||||+|++|+++|+.|++ . |++|+||||.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCC
Confidence 6999999999999999999999 7 99999999975
No 328
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.43 E-value=0.0013 Score=79.16 Aligned_cols=34 Identities=35% Similarity=0.545 Sum_probs=31.9
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+||+||||+|++|+++|.+|++ .|++|+|+|+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQ-LGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHH-CCCeEEEEeCCC
Confidence 4899999999999999999999 699999999984
No 329
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.42 E-value=0.0014 Score=79.90 Aligned_cols=34 Identities=41% Similarity=0.661 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+.+|.+|++ .|++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 4999999999999999999999 799999999984
No 330
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.42 E-value=0.002 Score=81.67 Aligned_cols=37 Identities=35% Similarity=0.570 Sum_probs=33.9
Q ss_pred CCCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 700 YPEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 700 ~~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
...+||||||+|++|+++|++|++. |++|+|+|+++.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 4579999999999999999999994 999999999863
No 331
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.41 E-value=0.0022 Score=76.89 Aligned_cols=36 Identities=31% Similarity=0.483 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCC--EEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENW--KILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~--~VLvLE~G~~ 114 (1306)
..+||+|||||++|+++|..|++ .|. +|+|+|+.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-~G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-EKAFDQVTLFERRGS 42 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCCSEEEEECSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCCCeEEEecCCC
Confidence 46899999999999999999999 799 9999999853
No 332
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.40 E-value=0.0014 Score=76.19 Aligned_cols=34 Identities=29% Similarity=0.493 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCC-EEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENW-KILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~-~VLvLE~G~ 113 (1306)
+|||||||+|++|+.+|.+|++ .|+ +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-FGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-cCCCcEEEEecCC
Confidence 6899999999999999999998 799 999999985
No 333
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.39 E-value=0.0014 Score=78.75 Aligned_cols=34 Identities=26% Similarity=0.472 Sum_probs=31.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
.+|||||||+|++|+++|.+|++ .|++|+|+|++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEccC
Confidence 36999999999999999999999 49999999995
No 334
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.36 E-value=0.0022 Score=78.86 Aligned_cols=40 Identities=23% Similarity=0.415 Sum_probs=36.0
Q ss_pred CCCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDET 116 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~~ 116 (1306)
++.+|||||||+|..|+++|..|++ .|++||+||+.+...
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~-~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSR-SGQRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHh-CCCEEEEEcCCCccc
Confidence 4568999999999999999999999 799999999997543
No 335
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.35 E-value=0.0018 Score=79.59 Aligned_cols=36 Identities=39% Similarity=0.576 Sum_probs=33.4
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
.+|||||||+|++|+.+|.+|++ .|++|+|||+++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 50 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 57999999999999999999999 6999999999863
No 336
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.34 E-value=0.0018 Score=79.74 Aligned_cols=36 Identities=31% Similarity=0.527 Sum_probs=32.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCC--CCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEI--ENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~--~G~~VLvLE~G~ 113 (1306)
..+||||||||++|+++|..|++. .|++|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 368999999999999999999971 499999999965
No 337
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.33 E-value=0.0014 Score=79.81 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=31.8
Q ss_pred CccEEEECCChhHHHHHHHHhCCC---CCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIE---NWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~---G~~VLvLE~G~ 113 (1306)
+|||||||+|++|+++|.+|++ . |++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAAT-SHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCcCEEEEEeCCC
Confidence 4899999999999999999998 5 99999999985
No 338
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.33 E-value=0.0017 Score=73.91 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
..+||||||+|++|+++|.+|++ .|++|+|||+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-ANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-TTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEccC
Confidence 36899999999999999999999 79999999965
No 339
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.32 E-value=0.0016 Score=78.80 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+||+||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~-~g~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-HTCCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 46999999999999999999998 699999999985
No 340
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.31 E-value=0.0015 Score=74.98 Aligned_cols=35 Identities=31% Similarity=0.423 Sum_probs=32.1
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
...|||||||+|++|+++|..|++ .|++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR-AQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH-TTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecC
Confidence 357999999999999999999999 79999999965
No 341
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.30 E-value=0.0024 Score=74.88 Aligned_cols=58 Identities=7% Similarity=0.057 Sum_probs=42.1
Q ss_pred HhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHH
Q psy1043 901 KAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQV 969 (1306)
Q Consensus 901 ~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~L 969 (1306)
...+...+++.|++|+++++|++|..++ + ...|.+.+|+ ++.++. ||+|+|..-...+
T Consensus 190 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----~-~~~v~~~~g~----~i~~d~-vv~a~G~~p~~~l 247 (384)
T 2v3a_A 190 AKAVQAGLEGLGVRFHLGPVLASLKKAG-----E-GLEAHLSDGE----VIPCDL-VVSAVGLRPRTEL 247 (384)
T ss_dssp HHHHHHHHHTTTCEEEESCCEEEEEEET-----T-EEEEEETTSC----EEEESE-EEECSCEEECCHH
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEecC-----C-EEEEEECCCC----EEECCE-EEECcCCCcCHHH
Confidence 3445556678899999999999998764 3 2456677775 778987 9999997543333
No 342
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.30 E-value=0.0016 Score=78.41 Aligned_cols=34 Identities=38% Similarity=0.528 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
.+||+||||+|++|+++|.+|++ .|++|+|+|+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECC
Confidence 36999999999999999999999 69999999987
No 343
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.28 E-value=0.0017 Score=78.34 Aligned_cols=33 Identities=33% Similarity=0.548 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
+|||||||+|++|+++|.+|++ .|++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-LGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCC
Confidence 5899999999999999999999 79999999987
No 344
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.28 E-value=0.0022 Score=77.53 Aligned_cols=37 Identities=38% Similarity=0.504 Sum_probs=32.5
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCC-EEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~~ 738 (1306)
..+||+|||+|++|+++|++|++ .|+ +|+|+|+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~-~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE-AGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH-TTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-cCCCceEEEeCCCCC
Confidence 46899999999999999999999 498 89999998754
No 345
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.24 E-value=0.0018 Score=78.43 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+||+||||+|++|+++|.+|++ .|++|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ-LGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 46999999999999999999999 699999999985
No 346
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.24 E-value=0.0015 Score=79.77 Aligned_cols=35 Identities=29% Similarity=0.512 Sum_probs=30.0
Q ss_pred CccEEEECCChhHHHHHHHHhCC--CCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEI--ENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~--~G~~VLvLE~G~ 113 (1306)
.+||||||||++|+++|..|++. .|++|+|||+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 37999999999999999999971 499999999975
No 347
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.23 E-value=0.0027 Score=74.96 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.|+|||+|++|+++|..|++ .|++|+|+||.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~-~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK-HGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCCEEEEecCC
Confidence 59999999999999999999 799999999975
No 348
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.23 E-value=0.0014 Score=74.17 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEE-EcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILL-LEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLv-LE~G 112 (1306)
..+||||||+|++|+.+|.+|++ .|++|+| +|+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR-GGLKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-HTCSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCC
Confidence 46999999999999999999999 7999999 9994
No 349
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.23 E-value=0.0022 Score=78.07 Aligned_cols=37 Identities=30% Similarity=0.402 Sum_probs=33.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||||||+|.+|+.+|..|++ .|.+|+|||+.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~-~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG-AGHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCC
Confidence 46899999999999999999998 79999999998654
No 350
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.23 E-value=0.0029 Score=75.73 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=33.1
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
..+||+|||||++|+++|++|++ .|++|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~-~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA-KGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeccCC
Confidence 46899999999999999999999 4999999999864
No 351
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.22 E-value=0.0016 Score=74.58 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEA 111 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~ 111 (1306)
..+||||||+|++|+++|..|++ .|++|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-AELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEec
Confidence 36899999999999999999999 7999999997
No 352
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.22 E-value=0.0033 Score=74.95 Aligned_cols=59 Identities=15% Similarity=0.259 Sum_probs=44.3
Q ss_pred hhhhhhhcCCCcEEEecceEEEEEe--cCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 902 AYLRPIIARPNLHVSLHSHAYRVHF--EPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 902 ~~L~~~~~~~g~~i~~~~~V~~I~~--~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
.++...+++.|++|++++.|++|.. ++ +++.+|.+.+|+ .+.++. ||+|+|..-...++
T Consensus 195 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-----~~v~~v~~~~G~----~i~~D~-Vv~a~G~~p~~~l~ 255 (431)
T 1q1r_A 195 AFYEHLHREAGVDIRTGTQVCGFEMSTDQ-----QKVTAVLCEDGT----RLPADL-VIAGIGLIPNCELA 255 (431)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEEECTTT-----CCEEEEEETTSC----EEECSE-EEECCCEEECCHHH
T ss_pred HHHHHHHHhCCeEEEeCCEEEEEEeccCC-----CcEEEEEeCCCC----EEEcCE-EEECCCCCcCcchh
Confidence 3455566678999999999999986 43 577788888885 678887 99999976443443
No 353
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.20 E-value=0.0023 Score=77.47 Aligned_cols=37 Identities=27% Similarity=0.338 Sum_probs=33.4
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC-CEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN-WKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G-~~VLvLE~G~~~ 115 (1306)
..+||+|||||++|+++|++|++ .| .+|+|||+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~-~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTE-LGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHH-TTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHH-cCCCCEEEEeCCCCC
Confidence 46899999999999999999999 67 799999998754
No 354
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.19 E-value=0.0029 Score=78.03 Aligned_cols=37 Identities=30% Similarity=0.356 Sum_probs=32.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCC--CCCEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEI--ENWKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~--~G~~VLvLE~G~~ 114 (1306)
..+||||||+|++|+++|..|++. .|.+|+|||+...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 479999999999999999999971 4899999999753
No 355
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.18 E-value=0.0026 Score=79.43 Aligned_cols=34 Identities=29% Similarity=0.552 Sum_probs=31.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
..|||||||+|++|+++|.+|++ .|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~-~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK-YGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHh-CCCeEEEEecc
Confidence 46999999999999999999999 49999999985
No 356
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.13 E-value=0.0021 Score=77.25 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
..||+||||+|++|+.+|.+|++ .|++|+|+|++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEccC
Confidence 46999999999999999999998 69999999984
No 357
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.12 E-value=0.0023 Score=77.19 Aligned_cols=34 Identities=41% Similarity=0.663 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+||+||||+|++|+.+|.+|++ .|++|+|+|++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-LGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 6999999999999999999999 799999999874
No 358
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.12 E-value=0.0027 Score=77.11 Aligned_cols=40 Identities=25% Similarity=0.466 Sum_probs=33.7
Q ss_pred CCCCCccEEEECCChHHHHHHHHHHc-CCCCEEEEECCCCC
Q psy1043 698 EMYPEYDFVVVGGGSAGAVVARRLSE-QKNWKVLLLEAGGE 737 (1306)
Q Consensus 698 ~~~~~yDvIVIGsG~aG~~aA~~Lae-~~G~~VlVLE~G~~ 737 (1306)
+++..+||||||+|++|+++|..|.+ ..|.+|+|||+.+.
T Consensus 7 ~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 7 KAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp -CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 34567999999999999999988876 23899999999864
No 359
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.11 E-value=0.0029 Score=77.59 Aligned_cols=36 Identities=33% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCC-----------CCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEI-----------ENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~-----------~G~~VLvLE~G~ 113 (1306)
..+||||||||++|+++|..|++. .|++|+|||+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 368999999999999999999971 599999999865
No 360
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.06 E-value=0.003 Score=76.37 Aligned_cols=37 Identities=43% Similarity=0.525 Sum_probs=32.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCC-EEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENW-KILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~-~VLvLE~G~~~ 115 (1306)
..+||||||+|.+|+++|++|++ .|+ +|+|||+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~-~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE-AGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH-TTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-cCCCceEEEeCCCCC
Confidence 46899999999999999999999 698 89999998654
No 361
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.05 E-value=0.0034 Score=75.29 Aligned_cols=38 Identities=32% Similarity=0.524 Sum_probs=33.2
Q ss_pred CCccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~~ 738 (1306)
+.+||||||+|++|+++|.+|++. .|++|+|+|+.+..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 358999999999999999999982 38899999999743
No 362
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.05 E-value=0.0027 Score=77.90 Aligned_cols=35 Identities=34% Similarity=0.578 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||+|++|+.+|.+|++ .|.+|+|||+++
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-QGLTVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-CCCCEEEEeCCC
Confidence 47999999999999999999999 799999999985
No 363
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.04 E-value=0.003 Score=75.81 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGGE 737 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 737 (1306)
+||||||+|++|+++|.+|++. +|.+|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 6999999999999999999982 3999999999874
No 364
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.03 E-value=0.0033 Score=80.02 Aligned_cols=37 Identities=32% Similarity=0.442 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||||||+|++|+++|..|++ .|++|+|||+++..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHN-FGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEecccce
Confidence 46999999999999999999999 79999999998643
No 365
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.01 E-value=0.0041 Score=78.88 Aligned_cols=37 Identities=35% Similarity=0.562 Sum_probs=33.9
Q ss_pred CCCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
...+||||||+|++|+.+|..|++ .|++|+|+|+++.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~-~G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGV-RGYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCC
Confidence 357999999999999999999999 7999999999864
No 366
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.95 E-value=0.0045 Score=72.57 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=30.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC--CEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN--WKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G--~~VLvLE~G~ 113 (1306)
..||+||||+|++|+++|.+|++ .| .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRK-LDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHT-TCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHh-hCCCCCEEEEECCC
Confidence 46999999999999999999998 57 5699999874
No 367
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.95 E-value=0.0025 Score=77.43 Aligned_cols=36 Identities=19% Similarity=0.434 Sum_probs=31.9
Q ss_pred CCCCccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCC
Q psy1043 76 LYPEYDFIVVGAGSAGAVVANRLSE-IENWKILLLEAG 112 (1306)
Q Consensus 76 ~~~~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G 112 (1306)
|..+||+||||+|++|+++|.+|++ . |++|+|+|+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~ 40 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQ 40 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESC
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecc
Confidence 4457999999999999999999997 4 8999999954
No 368
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.93 E-value=0.0029 Score=76.70 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=30.4
Q ss_pred CCccEEEECCChhHHHHHHHHhC-CCCCEEEEEcC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSE-IENWKILLLEA 111 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~ 111 (1306)
.+||+||||||++|+++|.+|++ . |++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEec
Confidence 36999999999999999999997 5 899999995
No 369
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.91 E-value=0.0034 Score=78.26 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
..|||||||||+||+++|.+|++ .|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~-~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK-YGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHh-CCCeEEEEecc
Confidence 47999999999999999999999 79999999985
No 370
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.89 E-value=0.0058 Score=76.99 Aligned_cols=37 Identities=30% Similarity=0.432 Sum_probs=33.9
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||+|||+|++|+++|++|++ .|++|+|+|+.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 46899999999999999999999 59999999998754
No 371
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.86 E-value=0.0035 Score=78.89 Aligned_cols=35 Identities=34% Similarity=0.559 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHhCC----CCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEI----ENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~----~G~~VLvLE~G~ 113 (1306)
++||||||+|++|+++|..|++. .|++|+|||+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 69999999999999999999971 499999999975
No 372
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.83 E-value=0.0039 Score=74.60 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=33.2
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
..+||+|||||++|+.+|..|++ .|++|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~-~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA-KGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeccCC
Confidence 46899999999999999999999 7999999999864
No 373
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.83 E-value=0.0054 Score=73.04 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCC--EEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENW--KILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~--~VLvLE~G~~ 114 (1306)
..+|+||||+|++|+.+|.+|++ .|. +|+|+|+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~-~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRA-SGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHc-cCcCCCEEEEECCCC
Confidence 36899999999999999999998 687 8999998864
No 374
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.81 E-value=0.0071 Score=77.05 Aligned_cols=36 Identities=28% Similarity=0.482 Sum_probs=33.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
..+||+|||+|++|+++|..|++ .|++|+|+|+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-SGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 46899999999999999999999 5999999999864
No 375
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.80 E-value=0.0056 Score=71.19 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=30.3
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-.||||||+|++|+++|.+|++. | +|+|+|+.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCC
Confidence 47999999999999999999994 8 999999986
No 376
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.78 E-value=0.004 Score=74.77 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhCC-CCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEI-ENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~-~G~~VLvLE~G~ 113 (1306)
||+||||+|++|+.+|.+|++. +|.+|+|+|+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 6999999999999999999981 399999999985
No 377
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.78 E-value=0.0043 Score=75.78 Aligned_cols=33 Identities=30% Similarity=0.494 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEA 111 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~ 111 (1306)
..|||||||||++|+++|.+|++ .|++|+|+|+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-~G~~v~lie~ 243 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-KGIRTGLMGE 243 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-CCCeEEEEEC
Confidence 47999999999999999999999 7999999986
No 378
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.73 E-value=0.0066 Score=72.33 Aligned_cols=34 Identities=29% Similarity=0.460 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHc--CCCCEEEEECCCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSE--QKNWKVLLLEAGGE 737 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae--~~G~~VlVLE~G~~ 737 (1306)
.||||||+|++|+++|.+|++ . |++|+|||+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCC
Confidence 689999999999999999998 4 899999999874
No 379
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.72 E-value=0.0085 Score=76.80 Aligned_cols=37 Identities=30% Similarity=0.432 Sum_probs=33.9
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||+|||+|++|+++|++|++ .|++|+|+|+.+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~-~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEecCcC
Confidence 46899999999999999999999 59999999998754
No 380
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.72 E-value=0.0046 Score=75.07 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=31.9
Q ss_pred CccEEEECCChHHHHHHHHHHcCCC---CEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKN---WKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G---~~VlVLE~G~ 736 (1306)
.+||||||+|++|+++|.+|++. | .+|+|||+.+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCC
Confidence 59999999999999999999994 7 9999999986
No 381
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.72 E-value=0.01 Score=74.93 Aligned_cols=37 Identities=30% Similarity=0.444 Sum_probs=33.7
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGEE 738 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~~ 738 (1306)
..+||||||+|++|+.+|..|++ .|++|+|+|+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAA-RGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 46899999999999999999999 59999999998643
No 382
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.64 E-value=0.0072 Score=70.25 Aligned_cols=33 Identities=21% Similarity=0.447 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
--|+||||+|+||+.+|.+|++ .| +|+|+|+++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-TY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-TS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhh-cC-CEEEEECCC
Confidence 4699999999999999999998 68 999999985
No 383
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.62 E-value=0.0066 Score=72.45 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=31.7
Q ss_pred CccEEEECCChHHHHHHHHHHc---CCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSE---QKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae---~~G~~VlVLE~G~ 736 (1306)
..||||||+|++|+++|.+|++ . |++|+|||+.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCC
Confidence 4799999999999999999998 5 99999999986
No 384
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.61 E-value=0.0063 Score=73.60 Aligned_cols=36 Identities=31% Similarity=0.558 Sum_probs=31.7
Q ss_pred CccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGGE 737 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 737 (1306)
.+||||||+|++|+++|.+|++. .|.+|+|||+.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 37999999999999999999982 3899999999864
No 385
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.57 E-value=0.0061 Score=72.07 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHc---CCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSE---QKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae---~~G~~VlVLE~G~ 736 (1306)
.||||||+|++|+++|.+|++ . |.+|+|||+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCC
Confidence 379999999999999999998 6 99999999986
No 386
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.56 E-value=0.0061 Score=73.02 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHcC-CCCEEEEECCCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGGE 737 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 737 (1306)
.||||||+|++|+++|.+|++. +|.+|+|||+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 4899999999999999999982 3899999999874
No 387
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.56 E-value=0.006 Score=80.05 Aligned_cols=36 Identities=39% Similarity=0.563 Sum_probs=33.3
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
..|||||||+|++|+++|.+|++ .|++|+|||+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~-~G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASR-SGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCC
Confidence 46999999999999999999999 5999999999864
No 388
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.51 E-value=0.0053 Score=74.50 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
..+||||||+|++|+.+|.+|++ . ++|+|||+++
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~-~-~~V~vie~~~ 140 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQ-Y-LTVALIEERG 140 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTT-T-CCEEEECTTS
T ss_pred ccCCEEEECccHHHHHHHHHHHh-c-CCEEEEeCCC
Confidence 46899999999999999999999 5 9999999986
No 389
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.50 E-value=0.007 Score=72.61 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGGD 114 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~~ 114 (1306)
.||||||+|++|+++|.+|++ .+|.+|+|||+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 599999999999999999998 23899999999974
No 390
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.41 E-value=0.006 Score=74.01 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHhCCCC---CEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIEN---WKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G---~~VLvLE~G~ 113 (1306)
.+||||||+|++|+.+|.+|++ .| .+|+|||+.+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~-~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLT-NYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh-cCCCCCeEEEEECCC
Confidence 5999999999999999999998 56 9999999885
No 391
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.40 E-value=0.0098 Score=75.11 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||||||+|++|+.+|..|++ .|++|+|+|+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAA-RGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 46899999999999999999999 79999999998643
No 392
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.39 E-value=0.0091 Score=75.19 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=34.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||+|||+|++|+++|..|++ .|++|+|+|+.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 56899999999999999999999 79999999998654
No 393
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.36 E-value=0.008 Score=71.02 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=32.2
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCC--EEEEECCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNW--KVLLLEAGGE 737 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~--~VlVLE~G~~ 737 (1306)
..+||||||+|++|+++|.+|++. |. +|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCC
Confidence 368999999999999999999994 87 5999999864
No 394
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.31 E-value=0.0085 Score=71.79 Aligned_cols=35 Identities=26% Similarity=0.566 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~ 113 (1306)
.+||||||+|++|+.+|.+|++ ..|.+|+|+|+.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 4799999999999999999998 2389999999986
No 395
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.29 E-value=0.01 Score=75.60 Aligned_cols=36 Identities=25% Similarity=0.459 Sum_probs=33.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
..+||+|||||++|+.+|..|++ .|++|+|+|+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-SGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 46899999999999999999999 7999999999864
No 396
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.28 E-value=0.0086 Score=72.60 Aligned_cols=38 Identities=16% Similarity=0.352 Sum_probs=32.7
Q ss_pred CCCccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCCC
Q psy1043 77 YPEYDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGGD 114 (1306)
Q Consensus 77 ~~~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~~ 114 (1306)
...+||||||+|+||+.+|..|.+ ..|.+|+|||+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 357999999999999999988876 24899999999863
No 397
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.27 E-value=0.0077 Score=72.67 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGGD 114 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~~ 114 (1306)
..||||||+|++|+++|.+|++ .+|.+|+|+|+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 4699999999999999999998 23899999999863
No 398
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.26 E-value=0.0078 Score=72.08 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~ 113 (1306)
.|+||||+|++|+.+|.+|++ .+|.+|+|+|+.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 489999999999999999998 2389999999985
No 399
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.25 E-value=0.0084 Score=72.49 Aligned_cols=35 Identities=26% Similarity=0.521 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHhCC-CCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEI-ENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~-~G~~VLvLE~G~ 113 (1306)
.+||||||+|++|+.+|.+|++. .|.+|+|||+.+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 47999999999999999999982 489999999985
No 400
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.18 E-value=0.0084 Score=78.68 Aligned_cols=37 Identities=32% Similarity=0.524 Sum_probs=33.6
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..|||||||+|++|+.+|.+|++ .|++|+|||+.+..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~-~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASR-SGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCC
Confidence 36899999999999999999999 79999999998643
No 401
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.10 E-value=0.014 Score=74.78 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=33.9
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~~ 115 (1306)
..+||+|||+|++|+++|++|++ .|++|+|||+.+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~-~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEecCcC
Confidence 46899999999999999999999 79999999998654
No 402
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.97 E-value=0.014 Score=69.98 Aligned_cols=34 Identities=29% Similarity=0.316 Sum_probs=31.7
Q ss_pred CccEEEECCChHHHHHHHHHHcCCC--CEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKN--WKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G--~~VlVLE~G~ 736 (1306)
.+||||||+|++|+.+|..|++. | ++|+|+|+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~ 41 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQL 41 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCC
Confidence 58999999999999999999994 7 9999999986
No 403
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.93 E-value=0.01 Score=71.07 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=32.0
Q ss_pred CCccEEEECCChHHHHHHHHHHc-C-C----CCEEEEECCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSE-Q-K----NWKVLLLEAGG 736 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae-~-~----G~~VlVLE~G~ 736 (1306)
..+||||||+|++|+.+|..|++ . + |.+|+|+|+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 46899999999999999999987 3 1 89999999986
No 404
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.87 E-value=0.012 Score=69.55 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCC--EEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENW--KILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~--~VLvLE~G~ 113 (1306)
..+|+||||+|++|+.+|.+|++ .|. +|+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQ-AGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHH-HTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHc-cCCCCeEEEEECCC
Confidence 46899999999999999999998 576 599999875
No 405
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.79 E-value=0.014 Score=77.04 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=32.6
Q ss_pred CCccEEEECCChHHHHHHHHHHcCCCC-EEEEECCCCC
Q psy1043 701 PEYDFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGGE 737 (1306)
Q Consensus 701 ~~yDvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~~ 737 (1306)
..+||+|||||++|+++|.+|++ .|+ +|+|+|+.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~-~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR-LGYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH-TTCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 36899999999999999999999 499 7999999763
No 406
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.78 E-value=0.017 Score=68.73 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~ 113 (1306)
.||||||+|++|+.+|.+|++ ..|++|+|||+.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 689999999999999999997 2489999999986
No 407
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.76 E-value=0.016 Score=72.10 Aligned_cols=38 Identities=34% Similarity=0.435 Sum_probs=33.4
Q ss_pred CCccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGGDE 115 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~~~ 115 (1306)
...||||||||++|+++|.+|++ .+|.+|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 35799999999999999999998 238999999999753
No 408
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.63 E-value=0.015 Score=68.69 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhC--CCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSE--IENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae--~~G~~VLvLE~G~ 113 (1306)
||||||||++|+.+|.+|++ ..|.+|+|||+.+
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 79999999999999999987 1489999999985
No 409
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=94.60 E-value=0.013 Score=72.97 Aligned_cols=36 Identities=28% Similarity=0.439 Sum_probs=32.6
Q ss_pred CccEEEECCChHHHHHHHHHHcCCC--------CEEEEECCCC-CC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKN--------WKVLLLEAGG-EE 738 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G--------~~VlVLE~G~-~~ 738 (1306)
..+|+|||+|++|+++|++|++ .| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~-~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR-LAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999999 48 9999999987 44
No 410
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.50 E-value=0.02 Score=68.22 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHhC--CCCCEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSE--IENWKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae--~~G~~VLvLE~G~ 113 (1306)
..||||||||++|+.+|.+|++ ..|++|+|||+.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4699999999999999999987 2589999999885
No 411
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.50 E-value=0.02 Score=67.63 Aligned_cols=59 Identities=22% Similarity=0.276 Sum_probs=44.8
Q ss_pred HhhhhhhhcCCCcEEEecceEEEEEecCCCCCCceEEEEEEeCCeeeeEEEEeCcEEEEcCCCcchHHHh
Q psy1043 901 KAYLRPIIARPNLHVSLHSHAYRVHFEPGPDGQMRATGVVVKKGRKDPVLVRARREVILSAGAIGSPQVY 970 (1306)
Q Consensus 901 ~~~L~~~~~~~g~~i~~~~~V~~I~~~~~~~~~~rv~GV~~~~G~~~~~~v~A~k~VVLAAGai~sp~LL 970 (1306)
...+....++.|++|++++.|++|..++ ++.+|++.+|+ ++.++. ||+|+|..-...++
T Consensus 188 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~dg~----~i~aD~-Vv~a~G~~p~~~l~ 246 (410)
T 3ef6_A 188 GAWLRGLLTELGVQVELGTGVVGFSGEG------QLEQVMASDGR----SFVADS-ALICVGAEPADQLA 246 (410)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEECSS------SCCEEEETTSC----EEECSE-EEECSCEEECCHHH
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeccC------cEEEEEECCCC----EEEcCE-EEEeeCCeecHHHH
Confidence 3445556677899999999999997643 56788888886 778987 99999976444443
No 412
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.50 E-value=0.018 Score=68.92 Aligned_cols=36 Identities=25% Similarity=0.249 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCC--CEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIEN--WKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G--~~VLvLE~G~~ 114 (1306)
..+|+||||+|++|+.+|..|++ .| ++|+|+|+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLK-HHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-HCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHh-cCCCCCEEEEeCCCc
Confidence 35899999999999999999998 56 99999999863
No 413
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.19 E-value=0.021 Score=75.46 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCC-EEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENW-KILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~-~VLvLE~G~~ 114 (1306)
..+||+|||||+||+++|.+|++ .|+ +|+|+|+.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~-~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR-LGYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH-TTCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 36899999999999999999999 799 7999999754
No 414
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.04 E-value=0.026 Score=69.77 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSE-IENWKILLLEAGGDE 115 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~~~ 115 (1306)
.||||||+|++|+.+|.+|++ ..+.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 379999999999999999998 238999999999764
No 415
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.89 E-value=0.041 Score=64.66 Aligned_cols=32 Identities=38% Similarity=0.589 Sum_probs=28.2
Q ss_pred EEEECCChHHHHHHHHHHcC-CCCEEEEECCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGG 736 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~ 736 (1306)
|||||+|++|+++|.+|.+. .+.+|+|||+.+
T Consensus 5 VvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred EEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 89999999999999999772 357999999986
No 416
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=93.83 E-value=0.024 Score=67.79 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHhC-C-C----CCEEEEEcCCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSE-I-E----NWKILLLEAGGD 114 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae-~-~----G~~VLvLE~G~~ 114 (1306)
.+||||||||++|+.+|..|++ . + |.+|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 5899999999999999999986 3 1 899999999863
No 417
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.79 E-value=0.031 Score=65.93 Aligned_cols=62 Identities=16% Similarity=0.134 Sum_probs=44.0
Q ss_pred cccccCCCCeEEEeccEEEEEEecCCCCeEEEEEEEeCCeEEEEEEcceEEEccCCCCcHHHHHHhCCC
Q psy1043 281 LQPVKTRPNLHISLHSHVTKVLIDPKNRMAIGVEFVKNHQRHVIRARKEVILSGGAVNSPQILMLSGIG 349 (1306)
Q Consensus 281 l~~~~~~~nl~I~~~~~V~~I~~d~~~~~~~GV~~~~~g~~~~v~A~k~VVLaAGai~Sp~LLl~SGiG 349 (1306)
+....++.|++|++++.|++|..++ ++.+|++.+ ++ ++.++. ||+|+|..-...+|..+|+-
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~d-g~--~i~aD~-Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASD-GR--SFVADS-ALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETT-SC--EEECSE-EEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECC-CC--EEEcCE-EEEeeCCeecHHHHHhCCCc
Confidence 3334456789999999999987543 455666543 32 577876 99999987777788777763
No 418
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.77 E-value=0.022 Score=71.02 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHhCCCC--------CEEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIEN--------WKILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G--------~~VLvLE~G~ 113 (1306)
..+|+|||+|.+|+++|++|++ .| ++|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~-~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR-LAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCcccccCCCceEEEEeccC
Confidence 5799999999999999999998 67 9999999986
No 419
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.40 E-value=0.049 Score=63.97 Aligned_cols=32 Identities=28% Similarity=0.464 Sum_probs=28.1
Q ss_pred EEEECCChhHHHHHHHHhC-CCCCEEEEEcCCC
Q psy1043 82 FIVVGAGSAGAVVANRLSE-IENWKILLLEAGG 113 (1306)
Q Consensus 82 vIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~ 113 (1306)
|||||||+||+++|.+|.+ ..+.+|+|||+.+
T Consensus 5 VvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred EEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 8999999999999999976 3457999999875
No 420
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.35 E-value=0.034 Score=66.22 Aligned_cols=32 Identities=25% Similarity=0.478 Sum_probs=28.6
Q ss_pred EEEECCChHHHHHHHHHHcCCC--CEEEEECCCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQKN--WKVLLLEAGGE 737 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~~G--~~VlVLE~G~~ 737 (1306)
|||||+|++|+++|.+|++. | .+|+|+|+++.
T Consensus 3 VvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRD 36 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSC
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCC
Confidence 89999999999999999983 6 57999999863
No 421
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.10 E-value=0.065 Score=62.53 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGGD 114 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~~ 114 (1306)
...-|||||+|+||+.+|.+|.. .+.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG-KCDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCCC
Confidence 45679999999999999999965 7999999999863
No 422
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.94 E-value=0.064 Score=64.90 Aligned_cols=35 Identities=11% Similarity=0.335 Sum_probs=31.7
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGGE 737 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~~ 737 (1306)
...|||||+|.||+.+|.+|++ .+++|+|||+.++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~-~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDT-KKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCT-TTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhh-CCCcEEEECCCCC
Confidence 4579999999999999999998 5999999999864
No 423
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.65 E-value=0.046 Score=65.05 Aligned_cols=31 Identities=29% Similarity=0.490 Sum_probs=27.8
Q ss_pred EEEECCChhHHHHHHHHhCCCC--CEEEEEcCCC
Q psy1043 82 FIVVGAGSAGAVVANRLSEIEN--WKILLLEAGG 113 (1306)
Q Consensus 82 vIIVGsG~aG~~~A~rLae~~G--~~VLvLE~G~ 113 (1306)
|||||+|+||+++|.+|++ .| .+|+|+|+++
T Consensus 3 VvIIG~G~AGl~aA~~l~~-~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRR-LDKESDIIIFEKDR 35 (437)
T ss_dssp EEEECCSTTHHHHHHHHHH-HCSSSCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHh-CCCCCcEEEEeCCC
Confidence 8999999999999999987 45 6899999885
No 424
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.58 E-value=0.069 Score=63.37 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHcC-CCCEEEEECCCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQ-KNWKVLLLEAGGE 737 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~-~G~~VlVLE~G~~ 737 (1306)
.|||||+|+||+++|.+|++. ++.+|+|||+.++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 489999999999999999872 3589999999864
No 425
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.17 E-value=0.1 Score=63.11 Aligned_cols=35 Identities=6% Similarity=0.330 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 78 PEYDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 78 ~~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+..-|||||||+||+.+|.+|+. .+++|+|||+.+
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~-~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDT-KKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCT-TTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhh-CCCcEEEECCCC
Confidence 34579999999999999999998 799999999875
No 426
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.98 E-value=0.097 Score=62.07 Aligned_cols=33 Identities=27% Similarity=0.493 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhC-CCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSE-IENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae-~~G~~VLvLE~G~ 113 (1306)
.|||||||+||+.+|.+|++ .++.+|+|||+.+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 48999999999999999986 3458999999875
No 427
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=86.30 E-value=0.55 Score=46.61 Aligned_cols=33 Identities=21% Similarity=0.378 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-.|+|||+|..|..+|..|.+ .|++|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 469999999999999999999 499999999875
No 428
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.55 E-value=0.55 Score=45.65 Aligned_cols=32 Identities=28% Similarity=0.548 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-++|+|+|..|..+|..|++. |++|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 499999999999999999994 99999999974
No 429
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.41 E-value=0.68 Score=44.65 Aligned_cols=32 Identities=28% Similarity=0.521 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.++|||+|..|..+|..|++ .|++|+++|+.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 58999999999999999999 499999999864
No 430
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=85.41 E-value=0.59 Score=45.52 Aligned_cols=32 Identities=19% Similarity=0.446 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.++|||.|..|..+|..|.+ .|++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLA-SDIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHH-CCCCEEEEECCH
Confidence 59999999999999999999 499999999975
No 431
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=84.85 E-value=0.53 Score=45.83 Aligned_cols=32 Identities=19% Similarity=0.492 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.++|||.|..|..+|..|.+ .|++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLA-SDIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHH-CCCCEEEEECCH
Confidence 58999999999999999998 799999999874
No 432
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.46 E-value=0.67 Score=46.00 Aligned_cols=33 Identities=18% Similarity=0.433 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
-.++|||+|..|..+|..|.+ .|.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 459999999999999999998 699999999764
No 433
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=84.41 E-value=0.57 Score=45.55 Aligned_cols=31 Identities=26% Similarity=0.546 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
-++|+|+|..|..+|..|.+ .|++|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTA-AGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEECC
Confidence 48999999999999999998 69999999975
No 434
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.30 E-value=0.7 Score=44.56 Aligned_cols=31 Identities=32% Similarity=0.566 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
.++|||+|..|..+|..|++ .|++|+++|+.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSE-KGHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECC
Confidence 58999999999999999998 69999999975
No 435
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.40 E-value=0.99 Score=41.91 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHcCCC-CEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKN-WKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G-~~VlVLE~G~ 736 (1306)
-++|+|+|..|..+|..|.+. | ++|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 589999999999999999995 8 9999999974
No 436
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=81.79 E-value=0.82 Score=45.19 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
-++|||+|..|..+|..|.+ .|++|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCCEEEEECC
Confidence 48999999999999999998 79999999975
No 437
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=80.57 E-value=1.3 Score=43.62 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
-++|||+|..|..+|..|.+ .|++|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCCEEEEECC
Confidence 48999999999999999999 49999999996
No 438
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=79.18 E-value=1.3 Score=41.13 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCC-CEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIEN-WKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G-~~VLvLE~G~ 113 (1306)
-++|+|+|..|..+|..|.+ .| ++|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~-~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKT-SSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHH-CSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCH
Confidence 58999999999999999998 68 8999999763
No 439
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=79.03 E-value=1.3 Score=49.49 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-|.|||+|..|...|..+|. .|++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 48999999999999999999 599999999874
No 440
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=78.64 E-value=1.2 Score=43.05 Aligned_cols=32 Identities=25% Similarity=0.487 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.++|+|+|..|..+|..|.+. |++|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999994 99999999864
No 441
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=77.17 E-value=1.9 Score=48.49 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+.|||+|..|+..|..|++ .|.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAK-TGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHH-TTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCh
Confidence 48999999999999999999 499999999974
No 442
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.92 E-value=1.3 Score=45.15 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHcCC-CCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQK-NWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~-G~~VlVLE~G~ 736 (1306)
.|+|||.|..|..+|..|.+ . |++|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 59999999999999999998 7 99999999975
No 443
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=76.22 E-value=1.3 Score=42.75 Aligned_cols=31 Identities=23% Similarity=0.502 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
.++|+|+|..|..+|..|.+ .|++|.++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~-~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHR-MGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 48999999999999999998 69999999875
No 444
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.91 E-value=1.3 Score=45.24 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCC-CCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIE-NWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~-G~~VLvLE~G~ 113 (1306)
.++|||.|..|..+|..|.+ . |++|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 59999999999999999998 7 99999999763
No 445
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=75.52 E-value=2.2 Score=47.43 Aligned_cols=32 Identities=28% Similarity=0.480 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-|.|||+|..|...|..|++ .|++|+++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~-~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAA-TGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 38999999999999999999 599999999975
No 446
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=74.51 E-value=2 Score=48.19 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+.|||+|..|+..|..|++ .|.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQR-SGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHH-TSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCeEEEEEcCc
Confidence 48999999999999999999 499999999964
No 447
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=74.41 E-value=1.7 Score=48.53 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
-|.|||+|..|.-.|..+|. .|++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 48899999999999999998 799999999653
No 448
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=74.40 E-value=2.1 Score=48.07 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+.|||+|..|+.+|..|++ .|.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAK-TGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHH-TTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCh
Confidence 47899999999999999999 799999999864
No 449
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=74.02 E-value=1.7 Score=45.68 Aligned_cols=31 Identities=16% Similarity=0.513 Sum_probs=29.1
Q ss_pred EEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
|+|||+|..|..+|..|.+ .|++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLS-RKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 8999999999999999999 499999999875
No 450
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=72.95 E-value=2.4 Score=45.68 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=30.3
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCC-EEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 736 (1306)
...|+|||+|..|+.+|..|+. .|. ++.|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCC
Confidence 3569999999999999999999 597 899999975
No 451
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=72.90 E-value=1.7 Score=45.72 Aligned_cols=31 Identities=10% Similarity=0.382 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 82 FIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 82 vIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
++|||+|..|..+|..|.+ .|++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLS-RKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 8999999999999999998 699999999763
No 452
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=72.80 E-value=3 Score=45.85 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=29.0
Q ss_pred EEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.|||+|..|...|..|++ .|++|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCK-QGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHh-CCCCEEEEEcCc
Confidence 7899999999999999999 599999999975
No 453
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=72.37 E-value=3.4 Score=43.20 Aligned_cols=33 Identities=12% Similarity=0.318 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
--+.|||+|..|...|..|++ .|.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~-~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEI-AGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 459999999999999999999 599999999875
No 454
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=72.13 E-value=2.2 Score=47.80 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+.|||+|..|+.+|..|++ .|.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQR-SGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHH-TSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCeEEEEEcCc
Confidence 48999999999999999999 699999999863
No 455
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=71.65 E-value=2.9 Score=49.81 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=30.7
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.-+.|||+|..|+..|..|++ .|++|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~-~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD-IGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 4568999999999999999999 499999999864
No 456
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=71.29 E-value=3.8 Score=45.03 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-|.|||+|..|...|..|++ .|++|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 48999999999999999999 599999999975
No 457
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=70.97 E-value=2.7 Score=47.63 Aligned_cols=31 Identities=26% Similarity=0.474 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
-+.|||+|..|+..|..|++ .|.+|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~-~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLAL-AGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHH-TTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCEEEEEECh
Confidence 48999999999999999999 49999999985
No 458
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=70.83 E-value=2.8 Score=46.61 Aligned_cols=31 Identities=23% Similarity=0.406 Sum_probs=28.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 82 FIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 82 vIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
|.|||+|..|..+|..|++ .|++|+++++..
T Consensus 18 I~VIG~G~mG~~iA~~la~-~G~~V~~~d~~~ 48 (302)
T 1f0y_A 18 VTVIGGGLMGAGIAQVAAA-TGHTVVLVDQTE 48 (302)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 8999999999999999998 799999999763
No 459
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=70.62 E-value=3.4 Score=46.28 Aligned_cols=32 Identities=19% Similarity=0.455 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHcCCCC--EEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNW--KVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 736 (1306)
-|.|||+|..|...|..|++ .|. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~-~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQ-RGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCh
Confidence 48999999999999999999 498 999999974
No 460
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=70.26 E-value=3 Score=45.92 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
-|.|||+|..|..+|..|+. .|++|++.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 37899999999999999998 799999998763
No 461
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=69.67 E-value=3.5 Score=45.33 Aligned_cols=31 Identities=16% Similarity=0.211 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 82 FIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 82 vIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+.|||+|..|..+|..|++ .|++|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCK-QGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHh-CCCCEEEEEcCc
Confidence 7899999999999999998 799999998874
No 462
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=69.52 E-value=3.8 Score=42.81 Aligned_cols=33 Identities=9% Similarity=0.326 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
--+.|||+|..|..+|..|++ .|.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~-~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEI-AGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 458999999999999999998 799999998764
No 463
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=68.94 E-value=3.8 Score=45.66 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-+.|||+|..|...|..|++ .|++|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHh-CCCcEEEEECCH
Confidence 48999999999999999999 599999999864
No 464
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=68.70 E-value=4.1 Score=45.38 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+.|||+|..|+..|..|+ + |.+|.++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 4899999999999999999 6 99999999975
No 465
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=68.26 E-value=3 Score=49.47 Aligned_cols=31 Identities=35% Similarity=0.657 Sum_probs=29.0
Q ss_pred EEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 82 FIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 82 vIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
+||+|+|-.|..+|..|++ .|+.|+|+|+.+
T Consensus 6 iiI~G~G~vG~~la~~L~~-~~~~v~vId~d~ 36 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVG-ENNDITIVDKDG 36 (461)
T ss_dssp EEEECCSHHHHHHHHHTCS-TTEEEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHH-CCCCEEEEECCH
Confidence 8999999999999999998 699999999773
No 466
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=68.19 E-value=3.5 Score=46.22 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-|.|||+|..|...|..|++ .|++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~-~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 38899999999999999999 599999999975
No 467
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=67.82 E-value=2.9 Score=47.30 Aligned_cols=31 Identities=32% Similarity=0.500 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
-+.|||+|..|+.+|..|++ .|.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~-~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLAL-AGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHH-TTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHH-CCCEEEEEECh
Confidence 48899999999999999999 79999999875
No 468
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.78 E-value=3.8 Score=43.18 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=29.5
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
.--|+|||+|-.|...|..|.+ .|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~-~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ-EGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG-GCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEECCC
Confidence 3459999999999999999999 59999999864
No 469
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=67.77 E-value=4.1 Score=47.95 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-|.|||+|..|...|..|++ +|++|+++|+.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~-aG~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGL-AGIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEECcH
Confidence 48999999999999999999 599999999975
No 470
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=67.33 E-value=2.3 Score=47.12 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
.+.|||+|..|...|..|++ .|.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~-~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQ-SLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 48999999999999999999 499999999974
No 471
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=67.16 E-value=4.1 Score=45.64 Aligned_cols=31 Identities=23% Similarity=0.464 Sum_probs=27.9
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
-.+.|||+|..|+..|..|++ .|.+|.++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLAR-AGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHH-CCCeEEEE-Ec
Confidence 348999999999999999999 49999999 64
No 472
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=67.03 E-value=4.3 Score=47.88 Aligned_cols=32 Identities=31% Similarity=0.365 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-+.|||+|..|+.+|..|++. |++|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 489999999999999999994 99999999975
No 473
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=66.91 E-value=4.4 Score=48.05 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-|.|||+|..|..+|..|++ .|++|+++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFAR-VGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 48999999999999999999 599999999874
No 474
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=66.61 E-value=4.8 Score=45.16 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=30.2
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCC-EEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 736 (1306)
..-|+|||+|..|+.+|..|+. .|. ++.|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~-aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEecCCE
Confidence 4569999999999999999999 597 788999875
No 475
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=66.58 E-value=4.2 Score=48.15 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHcCC-CC-EEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQK-NW-KVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~-G~-~VlVLE~G~ 736 (1306)
-|.|||+|..|+.+|..|++ . |+ +|+++++.+
T Consensus 20 kIaVIGlG~mG~~lA~~la~-~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFAD-APCFEKVLGFQRNS 53 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHH-STTCCEEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHH-hCCCCeEEEEECCh
Confidence 48999999999999999999 6 99 999999986
No 476
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=66.48 E-value=3.1 Score=45.33 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAG 735 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G 735 (1306)
--|+|||+|-.|...|..|.+ .|.+|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~-~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMP-TGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGG-GTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHh-CCCEEEEEcCC
Confidence 349999999999999999999 59999999875
No 477
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=66.41 E-value=4.6 Score=45.98 Aligned_cols=33 Identities=27% Similarity=0.363 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
--|.|||+|..|...|..|++ .|++|.++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-KGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 358999999999999999999 599999999864
No 478
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=66.33 E-value=3.2 Score=49.22 Aligned_cols=31 Identities=23% Similarity=0.592 Sum_probs=29.3
Q ss_pred EEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+||+|+|-.|..+|..|++. |++|+|||+.+
T Consensus 6 iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 89999999999999999984 99999999975
No 479
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=66.19 E-value=4.1 Score=47.59 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=31.0
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
...+.|||.|..|+++|..||+ .|++|+.+|-.+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~-~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFAL-LGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHh-CCCcEEEEECCH
Confidence 4679999999999999999999 499999999864
No 480
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=66.09 E-value=3.4 Score=44.48 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=30.0
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCC-EEEEEcCCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENW-KILLLEAGG 113 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~-~VLvLE~G~ 113 (1306)
...|+|||+|..|+.+|..|+. .|. +|.|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCC
Confidence 3569999999999999999998 786 899999764
No 481
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=65.76 E-value=4.1 Score=45.36 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
-+.|||+|..|..+|..|++ .|++|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHh-CCCcEEEEECC
Confidence 48899999999999999998 79999999875
No 482
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=65.73 E-value=4.3 Score=45.50 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC--EEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENW--KILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~--~VLvLE~G~ 113 (1306)
-+.|||+|..|..+|..|++ .|. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~-~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQ-RGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCh
Confidence 58999999999999999998 688 999999863
No 483
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=65.71 E-value=3.9 Score=48.65 Aligned_cols=33 Identities=21% Similarity=0.495 Sum_probs=30.0
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
..-+.|||.|..|+.+|..|++ .|++|+++++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~-~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD-IGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHh-CCCEEEEEECC
Confidence 4568999999999999999999 79999999876
No 484
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=65.18 E-value=5.2 Score=43.66 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-++|+|+|..|..+|..|++. |.+|.|+.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 389999999999999999994 99999998864
No 485
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=65.07 E-value=4.4 Score=47.70 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=28.8
Q ss_pred EEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.|||+|..|+..|..|++ .|++|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~-~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSA-RGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 7899999999999999999 599999999864
No 486
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=64.98 E-value=4.1 Score=45.64 Aligned_cols=31 Identities=23% Similarity=0.491 Sum_probs=27.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
-.+.|||+|..|+.+|..|++ .|.+|.++ +-
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLAR-AGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHH-CCCeEEEE-Ec
Confidence 348999999999999999999 79999999 54
No 487
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=64.94 E-value=3 Score=40.53 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
-++|||+|..|..+|..|++ .|.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~-~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSY-PQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCT-TTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCEEEEEcCCH
Confidence 38999999999999999998 599999999864
No 488
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=64.67 E-value=4.4 Score=42.67 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=28.8
Q ss_pred CccEEEECCChhHHHHHHHHhCCCCCEEEEEcC
Q psy1043 79 EYDFIVVGAGSAGAVVANRLSEIENWKILLLEA 111 (1306)
Q Consensus 79 ~yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~ 111 (1306)
.--|+|||+|..|...|..|.+ .|.+|.|+..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~-~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ-EGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG-GCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEECC
Confidence 3468999999999999999998 7999999975
No 489
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=64.64 E-value=5.6 Score=43.88 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
--|.|||+|..|...|..|+ . |++|++.|+.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 34899999999999999999 6 99999999975
No 490
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=64.40 E-value=5.6 Score=46.74 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=31.5
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+..+.|||.|..|+.+|..|+++ |++|+++++.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 56789999999999999999995 99999999986
No 491
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=64.27 E-value=4.7 Score=45.44 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHcCCCC-EEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 736 (1306)
-|.|||+|..|..+|..|+.. |+ +|.|+|...
T Consensus 11 kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 599999999999999999994 98 999999975
No 492
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=64.25 E-value=2.4 Score=46.96 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
.+.|||+|..|+..|..|++ .|.+|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~-~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQ-SLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 48999999999999999998 689999998873
No 493
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=64.23 E-value=5.3 Score=45.10 Aligned_cols=34 Identities=38% Similarity=0.520 Sum_probs=30.5
Q ss_pred CccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 702 EYDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 702 ~yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
+.-+.|||+|..|+..|..|++ .|++|.+++|.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~-~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHE-NGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 3568999999999999999999 499999999864
No 494
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=64.22 E-value=3.4 Score=44.97 Aligned_cols=32 Identities=19% Similarity=0.379 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCEEEEEcCC
Q psy1043 80 YDFIVVGAGSAGAVVANRLSEIENWKILLLEAG 112 (1306)
Q Consensus 80 yDvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G 112 (1306)
--|+|||+|-.|...|..|.+ .|.+|.|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~-~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMP-TGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGG-GTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHh-CCCEEEEEcCC
Confidence 359999999999999999999 79999999854
No 495
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=64.06 E-value=5.5 Score=44.28 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=28.5
Q ss_pred EEEECCChHHHHHHHHHHcCCCC--EEEEECCCC
Q psy1043 705 FVVVGGGSAGAVVARRLSEQKNW--KVLLLEAGG 736 (1306)
Q Consensus 705 vIVIGsG~aG~~aA~~Lae~~G~--~VlVLE~G~ 736 (1306)
|.|||+|..|.+.|..|+.. |. +|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 78999999999999999994 98 999999864
No 496
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=63.99 E-value=5.9 Score=44.57 Aligned_cols=32 Identities=19% Similarity=0.449 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHcCCCC-EEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 736 (1306)
-|.|||+|..|..+|..|+.. |+ +|.++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 599999999999999999994 98 999999975
No 497
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=63.29 E-value=5.3 Score=45.54 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHcCCCCEEEEECCCC
Q psy1043 703 YDFVVVGGGSAGAVVARRLSEQKNWKVLLLEAGG 736 (1306)
Q Consensus 703 yDvIVIGsG~aG~~aA~~Lae~~G~~VlVLE~G~ 736 (1306)
--+.|||+|.-|...|..|+++ |++|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3599999999999999999995 99999999964
No 498
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=63.26 E-value=5.4 Score=47.25 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
-|.|||+|..|..+|..|+. .|++|+++++..
T Consensus 39 kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFAR-VGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 48999999999999999998 799999998763
No 499
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=63.13 E-value=3.7 Score=39.89 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCEEEEEcCCC
Q psy1043 81 DFIVVGAGSAGAVVANRLSEIENWKILLLEAGG 113 (1306)
Q Consensus 81 DvIIVGsG~aG~~~A~rLae~~G~~VLvLE~G~ 113 (1306)
-+.|||+|..|..+|..|.+ .|.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~-~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSY-PQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCT-TTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCEEEEEcCCH
Confidence 48999999999999999998 799999998763
No 500
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=63.12 E-value=5.9 Score=44.33 Aligned_cols=32 Identities=25% Similarity=0.501 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHcCCCC-EEEEECCCC
Q psy1043 704 DFVVVGGGSAGAVVARRLSEQKNW-KVLLLEAGG 736 (1306)
Q Consensus 704 DvIVIGsG~aG~~aA~~Lae~~G~-~VlVLE~G~ 736 (1306)
-|.|||+|..|..+|..|++. |+ +|.++|+..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 489999999999999999994 98 999999975
Done!