Query psy10432
Match_columns 440
No_of_seqs 573 out of 1175
Neff 11.0
Searched_HMMs 46136
Date Fri Aug 16 17:46:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10432.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10432hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.1E-35 2.4E-40 265.7 34.5 355 30-414 28-387 (394)
2 PRK03545 putative arabinose tr 100.0 6.3E-34 1.4E-38 267.1 36.5 351 32-414 26-381 (390)
3 COG2271 UhpC Sugar phosphate p 100.0 3.2E-34 6.8E-39 252.5 28.6 374 16-414 26-435 (448)
4 PRK10213 nepI ribonucleoside t 100.0 1.1E-32 2.3E-37 258.1 36.4 344 31-406 36-384 (394)
5 PRK11551 putative 3-hydroxyphe 100.0 6.2E-33 1.3E-37 262.2 35.0 356 31-412 31-395 (406)
6 PRK09705 cynX putative cyanate 100.0 1.2E-32 2.5E-37 258.1 33.7 351 32-414 26-382 (393)
7 PRK09556 uhpT sugar phosphate 100.0 1E-32 2.2E-37 264.5 31.9 362 31-413 45-449 (467)
8 PRK05122 major facilitator sup 100.0 4.1E-32 8.9E-37 255.9 34.1 362 18-414 18-390 (399)
9 PRK11663 regulatory protein Uh 100.0 2.9E-32 6.3E-37 258.9 33.2 361 33-414 41-425 (434)
10 PRK15402 multidrug efflux syst 100.0 1.5E-31 3.2E-36 252.5 36.7 337 30-386 28-369 (406)
11 PRK10489 enterobactin exporter 100.0 2.7E-32 5.8E-37 258.4 31.3 363 20-409 22-395 (417)
12 PRK12382 putative transporter; 100.0 1E-31 2.2E-36 252.5 34.7 359 19-412 19-388 (392)
13 PRK09874 drug efflux system pr 100.0 8.5E-32 1.8E-36 254.8 33.8 365 22-414 21-399 (408)
14 TIGR00890 2A0111 Oxalate/Forma 100.0 2.3E-32 4.9E-37 255.9 29.4 353 31-406 19-375 (377)
15 TIGR00903 2A0129 major facilit 100.0 1.1E-31 2.3E-36 247.7 32.0 346 33-410 9-362 (368)
16 TIGR00893 2A0114 d-galactonate 100.0 9.4E-32 2E-36 253.5 31.1 361 31-410 10-396 (399)
17 TIGR00710 efflux_Bcr_CflA drug 100.0 6.6E-31 1.4E-35 246.8 36.1 336 25-378 15-355 (385)
18 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.3E-31 7.3E-36 249.6 33.4 349 31-402 24-410 (412)
19 TIGR00897 2A0118 polyol permea 100.0 6.2E-31 1.4E-35 247.5 34.3 373 19-412 17-400 (402)
20 PRK10091 MFS transport protein 100.0 3.9E-31 8.5E-36 247.3 32.5 361 23-414 11-377 (382)
21 PRK11273 glpT sn-glycerol-3-ph 100.0 9.1E-31 2E-35 250.0 35.5 358 35-414 49-436 (452)
22 PRK15403 multidrug efflux syst 100.0 2.1E-30 4.6E-35 244.1 36.6 353 29-404 30-388 (413)
23 TIGR00900 2A0121 H+ Antiporter 100.0 2.6E-31 5.6E-36 247.6 30.1 344 22-386 6-362 (365)
24 PRK10504 putative transporter; 100.0 7.6E-31 1.7E-35 252.6 34.3 331 30-378 25-409 (471)
25 PRK11195 lysophospholipid tran 100.0 7.9E-31 1.7E-35 245.5 32.7 366 19-414 7-381 (393)
26 PRK12307 putative sialic acid 100.0 9E-31 1.9E-35 249.0 33.5 340 31-394 34-389 (426)
27 PRK11646 multidrug resistance 100.0 1.2E-30 2.6E-35 244.8 33.6 358 23-409 18-384 (400)
28 PRK14995 methyl viologen resis 100.0 9.2E-31 2E-35 252.4 33.0 333 30-378 21-407 (495)
29 PF07690 MFS_1: Major Facilita 100.0 1.4E-31 3.1E-36 248.1 26.2 337 22-375 3-352 (352)
30 PRK10406 alpha-ketoglutarate t 100.0 2.9E-30 6.3E-35 245.2 33.9 358 32-414 39-425 (432)
31 PRK03633 putative MFS family t 100.0 4.6E-30 9.9E-35 240.1 34.4 348 25-409 16-368 (381)
32 TIGR00899 2A0120 sugar efflux 100.0 3.1E-30 6.7E-35 241.3 32.1 360 22-411 4-372 (375)
33 TIGR00891 2A0112 putative sial 100.0 2.1E-30 4.6E-35 245.0 30.9 353 22-397 19-400 (405)
34 PRK11102 bicyclomycin/multidru 100.0 1E-29 2.3E-34 237.8 34.6 329 31-376 7-341 (377)
35 PRK15034 nitrate/nitrite trans 100.0 1.1E-29 2.4E-34 235.6 34.1 365 25-414 44-455 (462)
36 COG2223 NarK Nitrate/nitrite t 100.0 2.3E-30 5E-35 228.7 27.9 369 22-414 21-402 (417)
37 PF05977 MFS_3: Transmembrane 100.0 7.2E-30 1.6E-34 242.7 33.0 373 15-412 10-393 (524)
38 PRK11043 putative transporter; 100.0 3.1E-29 6.8E-34 236.4 37.0 335 27-386 18-356 (401)
39 PRK15075 citrate-proton sympor 100.0 6.8E-30 1.5E-34 242.8 32.2 344 24-391 24-397 (434)
40 PRK03699 putative transporter; 100.0 2.2E-29 4.7E-34 236.5 34.8 352 31-414 23-381 (394)
41 PRK10642 proline/glycine betai 100.0 6.4E-30 1.4E-34 246.4 31.9 362 33-414 34-431 (490)
42 PLN00028 nitrate transmembrane 100.0 1.7E-29 3.8E-34 242.0 34.2 361 30-413 51-433 (476)
43 TIGR00892 2A0113 monocarboxyla 100.0 4.9E-30 1.1E-34 244.5 30.1 354 34-408 38-416 (455)
44 PRK10054 putative transporter; 100.0 9.6E-30 2.1E-34 238.3 29.7 358 20-406 12-377 (395)
45 TIGR01299 synapt_SV2 synaptic 100.0 3.6E-29 7.8E-34 245.7 34.4 358 33-414 185-735 (742)
46 PRK10473 multidrug efflux syst 100.0 4.3E-29 9.2E-34 234.7 33.7 271 22-306 10-286 (392)
47 PRK11010 ampG muropeptide tran 100.0 4.3E-29 9.3E-34 239.6 34.3 381 11-414 5-404 (491)
48 PRK09952 shikimate transporter 100.0 5.9E-29 1.3E-33 236.3 34.1 347 46-413 56-433 (438)
49 PRK11652 emrD multidrug resist 100.0 1E-28 2.3E-33 232.3 35.3 328 28-378 21-354 (394)
50 TIGR00711 efflux_EmrB drug res 100.0 1.5E-29 3.3E-34 244.9 30.3 339 25-378 12-404 (485)
51 PRK10133 L-fucose transporter; 100.0 1.4E-28 3.1E-33 232.7 34.9 351 30-406 41-426 (438)
52 TIGR00881 2A0104 phosphoglycer 100.0 3.4E-30 7.4E-35 241.3 23.5 350 27-394 7-378 (379)
53 PRK15011 sugar efflux transpor 100.0 1.3E-28 2.8E-33 231.1 34.0 362 19-413 19-391 (393)
54 TIGR00902 2A0127 phenyl propri 100.0 7.9E-29 1.7E-33 231.6 31.9 356 22-408 11-374 (382)
55 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-28 2.7E-33 234.5 33.5 355 40-414 51-434 (438)
56 PRK03893 putative sialic acid 100.0 9.5E-29 2.1E-33 239.8 32.6 350 28-402 33-442 (496)
57 PRK10077 xylE D-xylose transpo 100.0 1.3E-28 2.8E-33 237.9 32.4 362 33-412 30-456 (479)
58 TIGR00894 2A0114euk Na(+)-depe 100.0 1.2E-28 2.6E-33 236.7 30.4 350 44-412 70-449 (465)
59 PF05631 DUF791: Protein of un 100.0 1E-28 2.2E-33 215.8 26.9 294 8-303 27-323 (354)
60 TIGR00898 2A0119 cation transp 100.0 6E-29 1.3E-33 241.6 27.7 352 36-414 110-496 (505)
61 TIGR00879 SP MFS transporter, 100.0 3.7E-29 7.9E-34 241.9 25.8 364 31-412 44-469 (481)
62 TIGR00895 2A0115 benzoate tran 100.0 4.2E-28 9E-33 228.8 30.1 327 32-378 34-394 (398)
63 cd06174 MFS The Major Facilita 100.0 5.2E-28 1.1E-32 224.1 29.6 335 25-410 9-349 (352)
64 PRK11902 ampG muropeptide tran 100.0 1.8E-27 3.9E-32 224.1 33.1 366 22-414 6-391 (402)
65 PRK11128 putative 3-phenylprop 100.0 3.4E-27 7.4E-32 220.7 32.5 352 24-406 13-372 (382)
66 TIGR00889 2A0110 nucleoside tr 100.0 1.2E-27 2.6E-32 225.4 29.6 373 22-414 9-403 (418)
67 TIGR00886 2A0108 nitrite extru 100.0 9.8E-28 2.1E-32 223.6 27.3 332 22-370 8-365 (366)
68 KOG4332|consensus 100.0 1.8E-28 3.9E-33 201.8 19.0 396 8-412 30-430 (454)
69 PRK09528 lacY galactoside perm 100.0 2.1E-27 4.5E-32 225.1 29.2 369 22-414 17-404 (420)
70 TIGR00885 fucP L-fucose:H+ sym 100.0 9.7E-27 2.1E-31 218.4 32.3 344 30-404 18-403 (410)
71 TIGR00901 2A0125 AmpG-related 100.0 3.5E-27 7.7E-32 218.8 27.7 320 33-368 6-355 (356)
72 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-26 3.8E-31 223.4 32.0 349 47-414 53-490 (502)
73 PRK06814 acylglycerophosphoeth 100.0 1E-26 2.2E-31 246.7 32.7 373 19-404 15-413 (1140)
74 TIGR00896 CynX cyanate transpo 100.0 1.2E-26 2.7E-31 215.0 29.0 325 32-386 17-347 (355)
75 TIGR00883 2A0106 metabolite-pr 100.0 7.3E-27 1.6E-31 219.9 27.6 333 47-401 27-389 (394)
76 KOG1330|consensus 100.0 1.2E-28 2.5E-33 219.5 13.3 331 31-375 49-402 (493)
77 TIGR00792 gph sugar (Glycoside 100.0 1E-25 2.3E-30 215.1 33.3 328 31-378 15-374 (437)
78 KOG2532|consensus 100.0 3.6E-26 7.8E-31 213.8 28.6 350 44-414 67-448 (466)
79 PRK08633 2-acyl-glycerophospho 100.0 1.2E-25 2.6E-30 239.3 35.2 323 36-376 31-376 (1146)
80 TIGR00882 2A0105 oligosacchari 100.0 1.6E-25 3.6E-30 210.6 29.3 363 21-409 8-391 (396)
81 KOG3764|consensus 99.9 1.1E-26 2.5E-31 202.4 18.3 343 43-414 99-455 (464)
82 TIGR02718 sider_RhtX_FptX side 99.9 1.9E-24 4.2E-29 202.9 33.8 357 30-408 16-386 (390)
83 PRK10207 dipeptide/tripeptide 99.9 2.4E-24 5.2E-29 205.8 33.3 357 42-413 42-476 (489)
84 TIGR00924 yjdL_sub1_fam amino 99.9 2.2E-23 4.7E-28 199.2 34.5 371 30-414 25-469 (475)
85 TIGR00806 rfc RFC reduced fola 99.9 1.9E-23 4.1E-28 190.3 29.4 322 34-376 45-407 (511)
86 COG0738 FucP Fucose permease [ 99.9 6.5E-23 1.4E-27 180.4 31.5 344 30-406 28-402 (422)
87 KOG2533|consensus 99.9 5.2E-24 1.1E-28 199.6 26.0 341 34-397 65-440 (495)
88 PF03825 Nuc_H_symport: Nucleo 99.9 1.3E-22 2.7E-27 187.9 31.6 374 19-412 6-394 (400)
89 KOG2504|consensus 99.9 2.1E-23 4.6E-28 197.7 26.0 357 34-413 65-476 (509)
90 COG2807 CynX Cyanate permease 99.9 2.7E-22 5.8E-27 173.9 30.3 351 31-412 28-384 (395)
91 PRK09584 tppB putative tripept 99.9 3.2E-22 7E-27 192.3 33.9 366 34-411 40-477 (500)
92 KOG0569|consensus 99.9 6.7E-23 1.5E-27 189.5 27.2 351 43-414 47-456 (485)
93 KOG2615|consensus 99.9 7.9E-24 1.7E-28 183.6 19.3 327 55-405 73-432 (451)
94 PRK10429 melibiose:sodium symp 99.9 5.5E-22 1.2E-26 190.4 32.8 338 27-377 18-386 (473)
95 PRK09669 putative symporter Ya 99.9 1.6E-21 3.6E-26 186.0 34.6 323 33-377 27-381 (444)
96 TIGR01301 GPH_sucrose GPH fami 99.9 3.1E-20 6.7E-25 174.1 35.4 379 26-414 15-472 (477)
97 KOG0254|consensus 99.9 3.9E-21 8.4E-26 186.2 27.1 310 52-376 91-449 (513)
98 PRK09848 glucuronide transport 99.9 3.2E-20 6.9E-25 177.4 32.7 329 28-377 21-381 (448)
99 PF01306 LacY_symp: LacY proto 99.9 6.6E-21 1.4E-25 173.0 26.1 370 19-414 11-401 (412)
100 PF13347 MFS_2: MFS/sugar tran 99.9 1.4E-20 3.1E-25 178.6 28.6 327 34-378 20-378 (428)
101 PF11700 ATG22: Vacuole efflux 99.9 1.1E-19 2.3E-24 171.6 32.1 348 52-414 72-469 (477)
102 TIGR00788 fbt folate/biopterin 99.9 7E-21 1.5E-25 181.5 23.8 324 41-376 52-405 (468)
103 PF06609 TRI12: Fungal trichot 99.9 1.5E-19 3.2E-24 171.8 31.9 325 35-378 64-461 (599)
104 COG2211 MelB Na+/melibiose sym 99.9 5.6E-19 1.2E-23 162.0 34.3 327 34-376 31-388 (467)
105 KOG0255|consensus 99.9 5.4E-20 1.2E-24 179.3 29.4 313 43-378 111-462 (521)
106 PRK11462 putative transporter; 99.9 3.8E-19 8.3E-24 169.5 33.6 325 31-376 25-379 (460)
107 PTZ00207 hypothetical protein; 99.9 1.6E-19 3.5E-24 172.7 29.8 353 33-411 45-550 (591)
108 TIGR00805 oat sodium-independe 99.9 2.5E-21 5.4E-26 190.2 17.5 264 31-305 49-415 (633)
109 PF00083 Sugar_tr: Sugar (and 99.8 4.7E-25 1E-29 211.4 -15.4 348 51-414 47-438 (451)
110 PRK15462 dipeptide/tripeptide 99.8 1.2E-17 2.5E-22 157.5 34.1 361 34-405 28-469 (493)
111 KOG0253|consensus 99.8 7.1E-19 1.5E-23 152.2 22.7 341 42-414 105-520 (528)
112 KOG0252|consensus 99.8 1.5E-20 3.3E-25 167.4 11.6 339 53-414 90-499 (538)
113 TIGR01272 gluP glucose/galacto 99.8 2.1E-18 4.5E-23 155.5 24.0 274 98-401 6-303 (310)
114 KOG2563|consensus 99.8 7.2E-18 1.6E-22 150.6 23.7 351 14-378 38-415 (480)
115 PF03209 PUCC: PUCC protein; 99.8 9.2E-17 2E-21 143.4 30.7 351 41-414 6-399 (403)
116 KOG4686|consensus 99.8 1.9E-18 4.2E-23 144.2 17.3 378 15-414 38-444 (459)
117 COG2270 Permeases of the major 99.8 3.9E-18 8.6E-23 151.5 20.4 341 52-413 60-429 (438)
118 COG3104 PTR2 Dipeptide/tripept 99.7 5.2E-15 1.1E-19 134.9 23.9 363 33-411 40-485 (498)
119 KOG2325|consensus 99.7 8.7E-15 1.9E-19 134.9 19.0 369 29-409 48-471 (488)
120 KOG2816|consensus 99.7 4.9E-14 1.1E-18 131.8 23.9 297 60-378 72-386 (463)
121 PF03092 BT1: BT1 family; Int 99.6 9E-14 2E-18 131.0 20.8 367 38-414 13-414 (433)
122 TIGR00880 2_A_01_02 Multidrug 99.5 9.9E-14 2.1E-18 110.1 10.8 127 65-199 13-140 (141)
123 TIGR00889 2A0110 nucleoside tr 99.5 4.9E-13 1.1E-17 126.3 16.6 164 35-204 228-409 (418)
124 PRK05122 major facilitator sup 99.5 2.2E-12 4.7E-17 121.8 17.6 154 34-199 235-390 (399)
125 PRK10489 enterobactin exporter 99.4 4.8E-12 1E-16 120.1 17.4 162 35-204 243-406 (417)
126 PRK15011 sugar efflux transpor 99.4 5.4E-12 1.2E-16 118.7 16.2 156 34-199 235-392 (393)
127 PRK12382 putative transporter; 99.4 6.2E-12 1.3E-16 118.4 16.6 153 34-196 235-388 (392)
128 PF01770 Folate_carrier: Reduc 99.4 2.6E-10 5.5E-15 103.7 26.0 321 36-376 24-394 (412)
129 PRK09874 drug efflux system pr 99.4 2.7E-12 5.8E-17 121.6 14.0 158 34-199 238-400 (408)
130 PRK11551 putative 3-hydroxyphe 99.4 5.7E-12 1.2E-16 119.2 16.1 154 34-194 239-393 (406)
131 PRK03633 putative MFS family t 99.4 1.8E-11 3.9E-16 114.7 18.0 146 34-190 219-365 (381)
132 PRK09528 lacY galactoside perm 99.4 2.9E-12 6.3E-17 121.7 12.6 150 43-200 255-406 (420)
133 TIGR00902 2A0127 phenyl propri 99.4 1.4E-11 3.1E-16 115.3 16.8 148 30-187 220-369 (382)
134 TIGR01299 synapt_SV2 synaptic 99.4 1.4E-11 3E-16 122.2 16.9 129 64-202 609-738 (742)
135 cd06174 MFS The Major Facilita 99.4 1.1E-11 2.5E-16 114.6 15.5 153 32-192 192-347 (352)
136 TIGR00890 2A0111 Oxalate/Forma 99.4 4.6E-12 9.9E-17 118.5 12.7 144 36-187 226-372 (377)
137 TIGR00899 2A0120 sugar efflux 99.4 1.5E-11 3.2E-16 115.1 15.8 148 36-192 220-369 (375)
138 PRK10642 proline/glycine betai 99.4 4.6E-11 9.9E-16 115.6 19.2 161 34-203 269-435 (490)
139 PRK09705 cynX putative cyanate 99.4 3.9E-11 8.4E-16 112.8 17.2 163 33-205 223-389 (393)
140 PRK03545 putative arabinose tr 99.3 4.5E-11 9.8E-16 112.4 16.8 153 36-198 226-381 (390)
141 PF06963 FPN1: Ferroportin1 (F 99.3 1.4E-08 3.1E-13 94.2 31.4 349 19-376 6-410 (432)
142 COG2271 UhpC Sugar phosphate p 99.3 2.6E-11 5.7E-16 108.4 12.4 144 258-414 64-207 (448)
143 TIGR00879 SP MFS transporter, 99.3 9.7E-11 2.1E-15 113.3 15.8 159 35-201 304-474 (481)
144 TIGR00892 2A0113 monocarboxyla 99.3 3.4E-11 7.3E-16 115.3 11.3 148 35-190 261-414 (455)
145 PRK11663 regulatory protein Uh 99.3 2.8E-10 6E-15 108.5 17.3 135 258-407 58-192 (434)
146 PRK03893 putative sialic acid 99.3 8.4E-11 1.8E-15 114.3 13.9 139 35-181 295-437 (496)
147 PRK03699 putative transporter; 99.3 1.3E-10 2.9E-15 109.3 14.7 152 31-191 221-374 (394)
148 PRK09556 uhpT sugar phosphate 99.2 1.2E-10 2.7E-15 112.0 14.5 150 34-191 277-443 (467)
149 KOG3098|consensus 99.2 1.4E-08 3E-13 94.2 27.0 314 56-376 56-406 (461)
150 PRK11128 putative 3-phenylprop 99.2 2.6E-10 5.7E-15 106.8 16.3 144 34-187 224-369 (382)
151 PRK10054 putative transporter; 99.2 3.5E-10 7.5E-15 106.3 17.0 169 226-410 7-179 (395)
152 TIGR02718 sider_RhtX_FptX side 99.2 3.3E-10 7.2E-15 106.5 15.1 153 30-190 223-384 (390)
153 TIGR00712 glpT glycerol-3-phos 99.2 4E-10 8.6E-15 107.6 15.6 152 249-410 49-203 (438)
154 TIGR00900 2A0121 H+ Antiporter 99.2 3.4E-10 7.3E-15 105.4 14.8 145 258-412 34-178 (365)
155 TIGR00710 efflux_Bcr_CflA drug 99.2 4.7E-10 1E-14 105.3 15.1 139 258-411 40-178 (385)
156 PRK09952 shikimate transporter 99.2 1.1E-09 2.4E-14 104.5 17.6 160 34-200 269-435 (438)
157 TIGR00883 2A0106 metabolite-pr 99.2 2.2E-10 4.7E-15 107.8 12.6 142 34-183 238-387 (394)
158 PF07690 MFS_1: Major Facilita 99.2 8.5E-10 1.8E-14 102.1 16.4 137 257-408 31-167 (352)
159 PRK11010 ampG muropeptide tran 99.2 4.3E-09 9.4E-14 101.6 21.5 155 37-200 244-405 (491)
160 TIGR00893 2A0114 d-galactonate 99.2 5.1E-10 1.1E-14 105.3 14.5 153 31-192 231-394 (399)
161 TIGR00924 yjdL_sub1_fam amino 99.2 6.5E-10 1.4E-14 106.8 15.1 177 224-414 7-193 (475)
162 COG2814 AraJ Arabinose efflux 99.2 1E-09 2.2E-14 99.5 15.3 169 228-411 15-186 (394)
163 PRK10213 nepI ribonucleoside t 99.1 3.2E-09 7E-14 99.7 18.6 144 249-407 43-189 (394)
164 PF11700 ATG22: Vacuole efflux 99.1 1.4E-09 3.1E-14 103.2 15.9 150 43-200 310-470 (477)
165 PF05977 MFS_3: Transmembrane 99.1 2.5E-09 5.4E-14 102.7 17.4 149 36-192 239-389 (524)
166 PRK11195 lysophospholipid tran 99.1 1.9E-09 4.1E-14 101.3 16.2 164 225-407 2-168 (393)
167 PRK10077 xylE D-xylose transpo 99.1 8.3E-10 1.8E-14 106.9 14.0 158 37-202 293-462 (479)
168 PRK11646 multidrug resistance 99.1 2.8E-09 6.1E-14 100.4 17.2 162 231-408 15-180 (400)
169 PRK10091 MFS transport protein 99.1 3.1E-09 6.7E-14 99.6 17.0 168 226-408 3-173 (382)
170 TIGR00897 2A0118 polyol permea 99.1 4.1E-09 8.8E-14 99.5 17.9 162 226-398 13-178 (402)
171 PRK10473 multidrug efflux syst 99.1 2.9E-09 6.3E-14 100.2 16.6 137 258-409 38-174 (392)
172 PRK15462 dipeptide/tripeptide 99.1 2.2E-09 4.8E-14 101.8 15.6 174 227-414 10-190 (493)
173 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3.3E-09 7.2E-14 100.3 16.5 138 258-410 43-186 (412)
174 TIGR00891 2A0112 putative sial 99.1 3.7E-09 7.9E-14 100.0 16.8 135 257-406 46-182 (405)
175 PRK10504 putative transporter; 99.1 2.7E-09 5.9E-14 103.1 16.1 171 227-412 11-184 (471)
176 PF03137 OATP: Organic Anion T 99.1 1.1E-11 2.4E-16 119.2 -0.9 346 31-386 19-513 (539)
177 TIGR00769 AAA ADP/ATP carrier 99.1 1.3E-06 2.7E-11 82.4 32.7 256 38-301 26-345 (472)
178 TIGR00895 2A0115 benzoate tran 99.1 1.8E-09 3.9E-14 101.8 14.1 136 258-408 52-187 (398)
179 PRK14995 methyl viologen resis 99.1 5.2E-09 1.1E-13 101.5 17.5 140 258-412 41-181 (495)
180 PRK15075 citrate-proton sympor 99.1 3.6E-09 7.8E-14 100.9 16.1 138 33-176 256-400 (434)
181 TIGR00882 2A0105 oligosacchari 99.1 1.2E-09 2.7E-14 102.8 12.8 140 46-193 250-391 (396)
182 KOG4686|consensus 99.1 9.8E-10 2.1E-14 92.8 10.4 148 43-198 293-443 (459)
183 TIGR00711 efflux_EmrB drug res 99.1 3.8E-09 8.2E-14 102.5 16.2 139 258-411 37-175 (485)
184 PRK11273 glpT sn-glycerol-3-ph 99.1 3E-09 6.6E-14 101.9 15.0 153 33-193 271-431 (452)
185 KOG0637|consensus 99.1 1.5E-08 3.3E-13 91.7 17.4 255 31-296 48-369 (498)
186 PRK15402 multidrug efflux syst 99.0 7.1E-09 1.5E-13 98.1 16.3 129 38-173 238-373 (406)
187 TIGR00898 2A0119 cation transp 99.0 5.1E-09 1.1E-13 102.1 15.2 146 43-202 351-499 (505)
188 PRK11902 ampG muropeptide tran 99.0 1E-08 2.3E-13 96.8 16.8 141 41-193 236-386 (402)
189 TIGR00881 2A0104 phosphoglycer 99.0 1.6E-09 3.5E-14 101.3 11.1 139 258-410 30-168 (379)
190 PRK09584 tppB putative tripept 99.0 1.6E-08 3.4E-13 97.9 17.4 176 222-411 16-199 (500)
191 PRK12307 putative sialic acid 99.0 1.6E-08 3.5E-13 96.3 17.2 129 258-401 53-181 (426)
192 PRK10207 dipeptide/tripeptide 99.0 1.2E-08 2.6E-13 98.1 16.0 175 227-414 15-195 (489)
193 PRK11102 bicyclomycin/multidru 99.0 6.2E-09 1.4E-13 97.5 13.8 138 258-410 26-163 (377)
194 KOG1330|consensus 99.0 1.2E-09 2.6E-14 99.0 8.3 146 255-414 65-210 (493)
195 TIGR00792 gph sugar (Glycoside 99.0 5.7E-09 1.2E-13 99.8 13.7 120 48-173 255-383 (437)
196 KOG3626|consensus 99.0 1.3E-08 2.8E-13 98.6 15.8 258 38-305 120-477 (735)
197 PF01306 LacY_symp: LacY proto 99.0 8.1E-09 1.8E-13 94.6 13.9 149 46-202 255-405 (412)
198 PLN00028 nitrate transmembrane 99.0 3.1E-08 6.8E-13 95.4 18.7 144 258-413 71-219 (476)
199 COG2223 NarK Nitrate/nitrite t 99.0 1.2E-08 2.7E-13 91.6 14.5 150 34-195 237-399 (417)
200 PRK11043 putative transporter; 99.0 2.5E-08 5.4E-13 94.2 17.4 142 258-414 41-182 (401)
201 PRK10406 alpha-ketoglutarate t 99.0 2.5E-08 5.5E-13 95.1 17.0 150 34-191 262-418 (432)
202 TIGR00896 CynX cyanate transpo 99.0 1.2E-08 2.6E-13 94.7 13.9 133 33-172 215-350 (355)
203 PRK11652 emrD multidrug resist 99.0 2.7E-08 5.9E-13 93.7 16.5 135 258-407 43-177 (394)
204 TIGR00880 2_A_01_02 Multidrug 99.0 7.7E-09 1.7E-13 81.7 10.7 132 265-411 5-136 (141)
205 KOG3762|consensus 98.9 5.9E-08 1.3E-12 89.6 16.9 181 218-414 363-548 (618)
206 PF03825 Nuc_H_symport: Nucleo 98.9 3.2E-08 6.9E-13 92.3 15.5 164 31-200 223-398 (400)
207 TIGR00903 2A0129 major facilit 98.9 2.9E-08 6.4E-13 92.0 15.2 138 257-410 25-162 (368)
208 PRK15403 multidrug efflux syst 98.9 4.3E-08 9.3E-13 92.8 16.7 137 258-409 51-187 (413)
209 TIGR00885 fucP L-fucose:H+ sym 98.9 6.8E-08 1.5E-12 91.1 17.3 113 258-378 38-150 (410)
210 PRK08633 2-acyl-glycerophospho 98.9 1.6E-08 3.5E-13 108.6 14.7 144 35-185 252-398 (1146)
211 PRK15034 nitrate/nitrite trans 98.9 1.4E-07 3.1E-12 88.6 18.9 148 258-413 70-232 (462)
212 TIGR00887 2A0109 phosphate:H+ 98.9 3.2E-08 6.9E-13 96.3 15.2 128 68-202 353-493 (502)
213 COG2270 Permeases of the major 98.9 1.1E-08 2.3E-13 92.1 10.7 150 43-200 281-431 (438)
214 TIGR00886 2A0108 nitrite extru 98.9 6.6E-08 1.4E-12 90.1 16.6 137 228-376 3-144 (366)
215 KOG3574|consensus 98.9 3.1E-07 6.6E-12 81.2 18.4 329 37-376 52-423 (510)
216 TIGR00894 2A0114euk Na(+)-depe 98.9 2E-08 4.3E-13 96.9 12.1 146 254-412 72-218 (465)
217 PF02487 CLN3: CLN3 protein; 98.9 7.9E-07 1.7E-11 81.3 21.1 297 55-376 67-389 (402)
218 KOG0569|consensus 98.8 1.4E-07 3E-12 88.4 16.1 164 32-204 287-461 (485)
219 PF06813 Nodulin-like: Nodulin 98.8 7.2E-08 1.6E-12 82.7 12.6 132 31-170 18-157 (250)
220 TIGR01272 gluP glucose/galacto 98.8 2E-07 4.3E-12 84.3 15.4 140 33-183 158-301 (310)
221 TIGR00901 2A0125 AmpG-related 98.8 3.9E-08 8.5E-13 91.3 11.0 115 34-154 228-355 (356)
222 PRK06814 acylglycerophosphoeth 98.8 9.3E-08 2E-12 102.6 15.1 181 221-413 6-195 (1140)
223 TIGR00788 fbt folate/biopterin 98.8 4.4E-08 9.6E-13 93.9 11.2 151 43-199 281-447 (468)
224 KOG3764|consensus 98.8 4.3E-08 9.3E-13 87.2 9.1 142 258-414 106-248 (464)
225 KOG2504|consensus 98.8 9.6E-08 2.1E-12 91.5 12.3 153 31-191 314-470 (509)
226 TIGR00805 oat sodium-independe 98.7 1.3E-07 2.8E-12 93.8 13.2 153 257-414 67-282 (633)
227 TIGR01301 GPH_sucrose GPH fami 98.7 3.6E-07 7.7E-12 86.6 15.5 170 240-414 18-219 (477)
228 PRK09848 glucuronide transport 98.7 7.2E-08 1.6E-12 92.4 11.0 125 43-173 257-391 (448)
229 PRK10133 L-fucose transporter; 98.7 6.2E-07 1.3E-11 85.4 16.5 112 258-377 61-172 (438)
230 PF06609 TRI12: Fungal trichot 98.7 4.1E-07 8.8E-12 87.7 14.9 175 222-412 36-216 (599)
231 KOG3810|consensus 98.7 8.5E-07 1.8E-11 77.5 15.2 352 43-414 34-422 (433)
232 PF13347 MFS_2: MFS/sugar tran 98.7 3.6E-07 7.8E-12 87.1 13.7 145 23-174 233-388 (428)
233 TIGR00926 2A1704 Peptide:H+ sy 98.7 9.9E-06 2.1E-10 80.1 23.5 145 41-193 14-178 (654)
234 COG2807 CynX Cyanate permease 98.7 5.2E-07 1.1E-11 79.7 12.8 171 13-192 204-380 (395)
235 TIGR00806 rfc RFC reduced fola 98.6 2.6E-06 5.6E-11 79.2 17.6 143 258-414 61-204 (511)
236 COG0477 ProP Permeases of the 98.6 1.4E-06 3E-11 78.8 15.7 150 29-186 16-174 (338)
237 PRK09669 putative symporter Ya 98.6 7.1E-07 1.5E-11 85.5 13.5 114 54-173 268-391 (444)
238 COG3104 PTR2 Dipeptide/tripept 98.6 9E-07 2E-11 81.7 12.9 181 222-414 16-207 (498)
239 KOG2532|consensus 98.5 1.2E-06 2.6E-11 83.0 12.9 145 258-414 73-217 (466)
240 PTZ00207 hypothetical protein; 98.5 6.6E-06 1.4E-10 79.9 17.4 142 258-411 62-203 (591)
241 KOG0253|consensus 98.5 4.1E-07 8.9E-12 80.2 7.6 126 55-198 389-519 (528)
242 KOG2615|consensus 98.5 1.2E-06 2.7E-11 77.7 9.9 111 258-386 68-181 (451)
243 PRK10429 melibiose:sodium symp 98.4 2E-06 4.3E-11 83.0 11.5 120 48-173 264-396 (473)
244 KOG3762|consensus 98.3 1.3E-06 2.9E-11 80.9 7.1 152 31-190 387-540 (618)
245 PF12832 MFS_1_like: MFS_1 lik 98.3 1.4E-06 3.1E-11 59.9 5.5 67 24-90 9-75 (77)
246 PF05978 UNC-93: Ion channel r 98.3 2E-05 4.2E-10 62.5 11.8 99 64-168 51-149 (156)
247 COG0738 FucP Fucose permease [ 98.3 3.2E-05 6.9E-10 69.7 14.2 117 254-378 44-160 (422)
248 PF03209 PUCC: PUCC protein; 98.2 6.5E-05 1.4E-09 68.3 14.9 144 18-170 211-363 (403)
249 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0067 1.5E-07 58.0 31.6 170 133-303 169-363 (491)
250 KOG0254|consensus 98.2 2.7E-05 6E-10 75.9 12.8 136 261-411 92-228 (513)
251 PRK11462 putative transporter; 98.1 4.5E-05 9.8E-10 73.2 13.6 116 52-173 265-390 (460)
252 KOG2533|consensus 98.1 3.8E-05 8.2E-10 73.2 12.0 141 257-411 80-225 (495)
253 PF13000 Acatn: Acetyl-coenzym 98.1 0.00073 1.6E-08 62.9 19.7 329 37-376 22-459 (544)
254 KOG0255|consensus 98.0 4.8E-05 1E-09 74.5 12.1 135 258-410 118-252 (521)
255 COG2211 MelB Na+/melibiose sym 98.0 0.00013 2.8E-09 68.2 13.4 112 56-173 277-399 (467)
256 KOG2325|consensus 97.9 0.00022 4.7E-09 67.0 13.5 150 258-414 71-231 (488)
257 KOG0252|consensus 97.9 9E-05 2E-09 67.9 10.5 114 258-375 84-197 (538)
258 PF06813 Nodulin-like: Nodulin 97.8 0.00039 8.5E-09 59.9 11.9 132 238-378 14-151 (250)
259 PF00854 PTR2: POT family; In 97.8 0.00055 1.2E-08 63.9 13.3 105 81-193 2-119 (372)
260 PF00083 Sugar_tr: Sugar (and 97.7 5.5E-07 1.2E-11 86.5 -8.0 145 260-413 48-192 (451)
261 COG3202 ATP/ADP translocase [E 97.7 0.048 1E-06 51.1 31.6 263 36-306 44-369 (509)
262 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.0015 3.3E-08 64.9 13.9 152 258-414 23-183 (654)
263 PF06779 DUF1228: Protein of u 97.5 0.00025 5.5E-09 49.2 5.6 72 31-105 8-83 (85)
264 PF05631 DUF791: Protein of un 97.5 0.015 3.2E-07 52.4 17.3 149 252-414 60-217 (354)
265 KOG3880|consensus 97.4 0.0027 5.9E-08 55.2 10.9 295 55-376 70-396 (409)
266 KOG2816|consensus 97.3 0.0037 7.9E-08 59.4 12.5 130 267-414 71-200 (463)
267 KOG1237|consensus 97.3 0.11 2.3E-06 51.0 22.4 147 36-190 59-238 (571)
268 KOG2563|consensus 97.3 0.03 6.5E-07 51.8 17.1 113 258-376 79-194 (480)
269 TIGR00939 2a57 Equilibrative N 97.2 0.23 4.9E-06 47.2 23.3 113 261-376 310-426 (437)
270 KOG3097|consensus 97.2 0.089 1.9E-06 46.6 17.9 60 69-128 77-136 (390)
271 KOG2601|consensus 97.1 0.043 9.3E-07 49.4 15.4 151 22-173 34-204 (503)
272 PF12832 MFS_1_like: MFS_1 lik 96.8 0.012 2.6E-07 40.5 8.1 64 233-297 7-73 (77)
273 TIGR00769 AAA ADP/ATP carrier 96.7 0.24 5.1E-06 47.4 18.4 119 258-378 43-185 (472)
274 PF05978 UNC-93: Ion channel r 96.7 0.097 2.1E-06 41.6 13.1 102 264-377 43-144 (156)
275 PF03092 BT1: BT1 family; Int 96.5 0.039 8.4E-07 52.6 12.2 149 254-414 18-176 (433)
276 KOG1479|consensus 96.5 0.65 1.4E-05 42.9 19.2 106 267-376 292-397 (406)
277 PF00854 PTR2: POT family; In 96.5 0.024 5.2E-07 52.9 10.4 120 290-414 2-124 (372)
278 PF07672 MFS_Mycoplasma: Mycop 96.2 0.044 9.5E-07 46.9 9.2 96 140-237 2-105 (267)
279 KOG0637|consensus 96.2 0.021 4.5E-07 52.9 7.5 141 235-376 41-197 (498)
280 PRK03612 spermidine synthase; 96.0 0.24 5.3E-06 48.2 14.8 142 251-403 43-187 (521)
281 PF06963 FPN1: Ferroportin1 (F 95.9 1.2 2.6E-05 42.1 18.4 140 260-408 40-195 (432)
282 PRK03612 spermidine synthase; 95.6 0.57 1.2E-05 45.7 15.2 60 107-173 115-175 (521)
283 KOG3098|consensus 95.2 0.36 7.8E-06 45.7 12.0 116 44-166 272-410 (461)
284 PF02487 CLN3: CLN3 protein; 94.9 0.84 1.8E-05 42.5 13.3 69 96-170 329-397 (402)
285 PF03137 OATP: Organic Anion T 94.7 0.0061 1.3E-07 59.4 -0.9 121 254-376 34-195 (539)
286 KOG3626|consensus 94.3 0.28 6E-06 49.0 9.2 155 258-414 132-344 (735)
287 COG0477 ProP Permeases of the 93.3 0.94 2E-05 40.3 10.6 109 259-376 40-150 (338)
288 KOG1479|consensus 92.9 6 0.00013 36.8 14.6 86 325-414 120-205 (406)
289 PF01770 Folate_carrier: Reduc 91.4 6.3 0.00014 37.0 13.1 124 273-414 56-183 (412)
290 KOG3574|consensus 91.3 12 0.00026 34.6 14.1 54 325-378 136-189 (510)
291 PF06779 DUF1228: Protein of u 90.3 1.9 4.2E-05 30.1 6.8 48 258-306 27-74 (85)
292 PF03219 TLC: TLC ATP/ADP tran 90.0 20 0.00043 34.8 17.7 37 342-378 164-200 (491)
293 TIGR00939 2a57 Equilibrative N 89.4 13 0.00029 35.5 13.9 89 268-360 55-143 (437)
294 COG3202 ATP/ADP translocase [E 87.9 26 0.00057 33.6 17.5 119 258-378 61-204 (509)
295 KOG4830|consensus 82.1 0.23 5E-06 42.5 -1.6 61 32-92 34-104 (412)
296 KOG1237|consensus 80.7 27 0.00058 34.7 11.7 148 263-414 78-246 (571)
297 KOG3880|consensus 74.0 6.4 0.00014 35.1 4.7 69 94-168 334-402 (409)
298 PF01733 Nucleoside_tran: Nucl 73.6 1.2 2.7E-05 40.2 0.4 113 262-376 186-302 (309)
299 KOG4332|consensus 72.6 22 0.00047 31.2 7.4 43 258-301 72-114 (454)
300 PF03741 TerC: Integral membra 61.9 89 0.0019 25.7 12.4 37 135-171 23-59 (183)
301 PF02990 EMP70: Endomembrane p 60.6 1.1E+02 0.0024 30.2 10.8 29 260-289 299-327 (521)
302 PF02694 UPF0060: Uncharacteri 59.4 67 0.0015 23.5 6.9 48 258-306 54-101 (107)
303 TIGR01666 YCCS hypothetical me 58.0 1.4E+02 0.003 30.7 11.2 50 70-119 43-98 (704)
304 PF04281 Tom22: Mitochondrial 57.1 42 0.0009 26.0 5.7 54 346-412 59-112 (137)
305 TIGR01667 YCCS_YHJK integral m 57.0 1.4E+02 0.003 30.8 11.0 51 69-119 42-98 (701)
306 PF12805 FUSC-like: FUSC-like 50.9 1.7E+02 0.0036 26.1 9.6 35 85-119 4-40 (284)
307 PF00909 Ammonium_transp: Ammo 50.6 2.3E+02 0.0049 26.9 14.0 27 141-167 108-134 (399)
308 PF08611 DUF1774: Fungal prote 49.4 56 0.0012 23.4 4.9 21 390-410 51-71 (97)
309 PRK15015 carbon starvation pro 49.3 3E+02 0.0064 27.9 14.1 34 135-173 79-113 (701)
310 KOG3810|consensus 46.7 79 0.0017 29.1 6.6 92 55-152 276-370 (433)
311 PRK02237 hypothetical protein; 46.1 1.2E+02 0.0026 22.3 8.3 47 258-305 56-102 (109)
312 TIGR00986 3a0801s05tom22 mitoc 45.5 70 0.0015 24.8 5.3 31 346-376 57-87 (145)
313 PF01102 Glycophorin_A: Glycop 44.1 33 0.00072 25.9 3.4 10 405-414 81-90 (122)
314 PF11299 DUF3100: Protein of u 43.4 23 0.00049 30.0 2.7 93 68-167 125-229 (241)
315 PF07672 MFS_Mycoplasma: Mycop 42.7 2.4E+02 0.0051 24.8 9.0 65 55-119 145-221 (267)
316 PF04346 EutH: Ethanolamine ut 41.2 2.9E+02 0.0062 25.5 9.2 65 55-119 51-119 (354)
317 PF07760 DUF1616: Protein of u 30.8 3.9E+02 0.0085 23.9 10.2 64 105-176 22-85 (287)
318 PF11947 DUF3464: Protein of u 30.4 1.3E+02 0.0027 23.9 4.7 51 100-159 95-145 (153)
319 PF01733 Nucleoside_tran: Nucl 29.7 15 0.00032 33.2 -0.5 61 100-166 246-306 (309)
320 PF13000 Acatn: Acetyl-coenzym 29.0 5.7E+02 0.012 25.2 11.5 31 348-378 144-174 (544)
321 PF09527 ATPase_gene1: Putativ 28.3 1.5E+02 0.0034 18.4 5.7 25 269-293 11-35 (55)
322 PF13940 Ldr_toxin: Toxin Ldr, 27.2 1.2E+02 0.0026 16.8 2.9 20 265-284 15-34 (35)
323 PF11511 RhodobacterPufX: Intr 24.4 2.2E+02 0.0047 18.8 5.1 17 189-205 44-60 (67)
324 PF09930 DUF2162: Predicted tr 24.1 4.6E+02 0.01 22.5 13.6 51 249-303 122-172 (224)
325 PRK15086 ethanolamine utilizat 21.9 6.5E+02 0.014 23.4 8.7 64 55-118 52-119 (372)
326 PF11947 DUF3464: Protein of u 20.4 2.3E+02 0.005 22.5 4.5 27 347-373 119-145 (153)
327 PRK11111 hypothetical protein; 20.4 5.4E+02 0.012 21.9 8.2 52 135-187 35-86 (214)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=265.66 Aligned_cols=355 Identities=16% Similarity=0.178 Sum_probs=286.2
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
.+.+..+.+|++.+|+|+|..+.|++.++......+.+|+...+.||+.||++++..+.++.++ +++++++||+.++++
T Consensus 28 tEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~a 107 (394)
T COG2814 28 TEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLA 107 (394)
T ss_pred HHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 4778889999999999999999999666666666666689999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
|++.|+..|.+.+...+... |..|++||++++++...+.+++.++|.++|.++.+.+|| |..|++...+.++
T Consensus 108 R~~~g~a~G~f~~i~~~~a~------~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW--R~~F~~ia~l~ll 179 (394)
T COG2814 108 RALAGLAHGVFWSIAAALAA------RLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW--RATFLAIAVLALL 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH--HHHHHHHHHHHHH
Confidence 99999999999776666666 999999999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh-ccC---CchhhHH
Q psy10432 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE-VLS---PPLGLVF 264 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~g~~~ 264 (440)
..+..+..+| +++.+++ ...+ .++..+++|+|+++...+...+.+.+.+..+++..|+++ ..+ ...++.+
T Consensus 180 ~~~~~~~~lP--~~~~~~~---~~~~-~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~L 253 (394)
T COG2814 180 ALLLLWKLLP--PSEISGS---LPGP-LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVL 253 (394)
T ss_pred HHHHHHHhCC--CccCCCC---CCcc-hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHH
Confidence 8888888888 2111111 1111 223457788999999999999999999999899999993 333 7889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432 265 SCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG 344 (440)
Q Consensus 265 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (440)
..++++.++|+.+.|++.|| +.++.+.....+..+..+.+... ... .+ .......+.++..+...+...
T Consensus 254 l~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~-~~~--~~------~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 254 LAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFT-GAS--PA------LALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred HHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHh-cch--HH------HHHHHHHHHHHHhhhhhhHHH
Confidence 99999999999999999995 77777777666666655554221 111 12 233333334444444444444
Q ss_pred hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
....+. -+|.+..+.+++....|+|..+|.. .+ |...| +.++....+.++...+++..+.....+
T Consensus 323 ~~~a~~-~p~~~~~a~sl~~aa~nlgia~GA~--lG-G~v~~-~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 323 TRLARL-APDAADLAGSLNVAAFNLGIALGAA--LG-GLVLD-ALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHhccc-CCCchHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555553 3588899999999999999999999 56 88888 799999999999999888887776655
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=6.3e-34 Score=267.09 Aligned_cols=351 Identities=14% Similarity=0.110 Sum_probs=259.4
Q ss_pred HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432 32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL 110 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 110 (440)
....+.+|.+.+|+|.|++++++..+.......+.+++.|+++||+||||++..+..+.+++ ..+.+++|++.+++.|+
T Consensus 26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 105 (390)
T PRK03545 26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI 105 (390)
T ss_pred HHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34556678888999999999999766666666666679999999999999999999999998 78889999999999999
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 190 (440)
++|++.+...+...+++. |++|+|||++++++...+.++|..+||++++.+.+++|| |+.|...+...++..
T Consensus 106 ~~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 106 GIAFAHAIFWSITASLAI------RVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW--RTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHHHHHHHH------HhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH--HHHHHHHHHHHHHHH
Confidence 999999988777777777 999999999999999999999999999999999999999 888888777666555
Q ss_pred HHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHH
Q psy10432 191 LFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSC 266 (440)
Q Consensus 191 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~ 266 (440)
+......||++++++ + ..++.++.+|||.++......++.....+......+|++ +..+ ...+.....
T Consensus 178 ~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 249 (390)
T PRK03545 178 LLLIKLLPLLPSEHS-------G-SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLL 249 (390)
T ss_pred HHHHHhCCCCCCCCc-------c-hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 555555565432211 1 123456788888887655555444444444334445555 3233 567888888
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432 267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL 346 (440)
Q Consensus 267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 346 (440)
..++.++++++.+++.|| ++++.. ..+......+...+... .+..+ .......+.+++.+...+.....
T Consensus 250 ~~~~~~~g~~~~g~l~dr-~~~~~~-~~~~~~~~~~~~~l~~~---~~~~~------~~~~~~~l~g~~~~~~~~~~~~~ 318 (390)
T PRK03545 250 FGGAGIIGSVLFSRLGNR-HPSGFL-LIAIALLLVCLLLLLPA---ANSEW------HLSVLSIFWGIAIMCIGLAMQVK 318 (390)
T ss_pred HHHHHHHHHHHHHHHhhc-cchhHH-HHHHHHHHHHHHHHHHH---hchHH------HHHHHHHHHHHHHhcchHHHHHH
Confidence 899999999999999997 886654 33333333333222111 11111 22333334444555555666677
Q ss_pred hccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 347 RGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.+..| +.+++++|..+...++|..+||.+. |.+.| ..+++..|...+.+.+++.+......+
T Consensus 319 ~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~---G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 319 VLKLAP-DATDVAMALFSGIFNIGIGAGALLG---NQVSL-HLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 777755 6889999999999999999999944 78888 889999999998888887776655544
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=252.51 Aligned_cols=374 Identities=15% Similarity=0.157 Sum_probs=281.2
Q ss_pred HHHHHHHHHHHHHHH----HHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhH
Q psy10432 16 LQVRYFIPFFLATFS----DWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGI 88 (440)
Q Consensus 16 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~ 88 (440)
.+.+.+...++...+ .-.+....|.+.+|.++|.+|+|. .+.+.|.++-+ +.|.++||.+.|+.+..+++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf---~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKF---VMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---HhhhhcccCCCceeehHHHH
Confidence 333344444444443 444667788889999999999997 56667777766 99999999999999999999
Q ss_pred HHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH--H
Q psy10432 89 VYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTA--H 165 (440)
Q Consensus 89 ~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~ 165 (440)
+.++. ++++++++.+.+.+..+++|..+|...|.+...+. +|++++|||+..++++...++|..+.|++. +
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~------~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTIT------HWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHH------HHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 99999 89999999999999999999999999998887777 999999999999999999999999999988 8
Q ss_pred HHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCC---------c--c--CCCCcc----chhhhhhhhccCcch
Q psy10432 166 FFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKT---------A--K--SSLLPN----SMFSSLKFLFTNPCL 228 (440)
Q Consensus 166 ~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---------~--~--~~~~~~----~~~~~~~~~~~~~~~ 228 (440)
++..+.+| |..|+..+++.++..++.++..+|+|++.. + + ++++.. ....-++.+++||.+
T Consensus 177 ~~~~~~~w--~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~i 254 (448)
T COG2271 177 FFAFHGGW--RAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLI 254 (448)
T ss_pred HHHhccch--hHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHH
Confidence 88888889 999999999999888888888888775210 0 0 000000 112245678999999
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHHHHHHHHHH
Q psy10432 229 LTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLTVYLATFS 302 (440)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~~~~~~~~~ 302 (440)
|.+.+...+.+..-+.... |.|+| +..+ ..++...+.+-.+++.|+++.|+++||.+ |||....+.+.+....
T Consensus 255 W~la~a~vfvYivR~gi~d-W~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~ 333 (448)
T COG2271 255 WLLALANVFVYVVRYGIND-WGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITA 333 (448)
T ss_pred HHHHHHHHHHHHHHHHHhh-hHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 9999999999999998865 99988 4443 77888899999999999999999999822 3333333322222222
Q ss_pred HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhh--hHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhh
Q psy10432 303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP--VTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIK 379 (440)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~ 379 (440)
.+.. +...++.+... ....+ +..++-++.| .......|..|++..|++.|+...+.++ |...+...+
T Consensus 334 ~~~~--~w~~~~~~~~l-----~~~~l--~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~- 403 (448)
T COG2271 334 SLVL--YWLAPNGSYLL-----DAILL--FIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL- 403 (448)
T ss_pred HHHH--HHcCCCccHHH-----HHHHH--HHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc-
Confidence 2222 22222222211 22222 2222333444 5556778999999999999999999999 666766633
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 380 NEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.+.| ..||...|.+..+..+++.++.....+
T Consensus 404 --g~i~d-~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 404 --GYIAD-TWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred --eeeEe-cCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 78888 689999999988888887777665554
No 4
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.1e-32 Score=258.13 Aligned_cols=344 Identities=14% Similarity=0.129 Sum_probs=253.9
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
+....+.+|++.+++|.+++++++..++......+.+|+.|+++||+|||++++.+.++.+++ +++.+++|++.+++.|
T Consensus 36 ~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 36 EFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 334456788888999999999999777777777777789999999999999999999999998 6778889999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
+++|++.+...|...+++. |++|+|+|++++++.....++|..+||.+++.+.+++|| |+.|++...+.++.
T Consensus 116 ~l~G~~~g~~~~~~~~~i~------~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~l~~~~ 187 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTM------RLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW--RNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHhhHHHHHHHHHHHH------HHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH--HHHHHHHHHHHHHH
Confidence 9999999998887777776 999999999999999999999999999999999999999 88887776655544
Q ss_pred HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHH
Q psy10432 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFS 265 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~ 265 (440)
.+......||+++++++ . .+..++.+++|.++...+..++.....+......+|.+ +..+ ...+..+.
T Consensus 188 ~l~~~~~~p~~~~~~~~----~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~ 259 (394)
T PRK10213 188 IFWIIKSLPSLPGEPSH----Q----KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLL 259 (394)
T ss_pred HHHHHHHCCCCCccccc----c----hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHH
Confidence 44444455665322111 1 12345677888888766655555555555545455666 4333 55788888
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHh
Q psy10432 266 CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGY 345 (440)
Q Consensus 266 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 345 (440)
..+++.++++.+.+++.|| .++ +.+..+..........+... ....+ .......+.+++.+...+...+
T Consensus 260 ~~~~~~iig~~~~~~l~~r-~~~-~~l~~~~~~~~~~~~~l~~~---~~~~~------~~~~~~~l~G~~~~~~~~~~~~ 328 (394)
T PRK10213 260 SFGIASFVGTSLSSFILKR-SVK-LALAGAPLVLAVSALVLTLW---GSDKI------VATGVAIIWGLTFALVPVGWST 328 (394)
T ss_pred HHHHHHHHHHHHHHHHHhc-cch-hHHHHHHHHHHHHHHHHHHH---hhhHH------HHHHHHHHHHHHHHhhhHHHHH
Confidence 8999999999999999997 543 43333333322222222111 11112 2334445566677788888888
Q ss_pred HhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432 346 LRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL 406 (440)
Q Consensus 346 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (440)
.+++..| +++++..+......+++..+|+.+. |.+.| ..++...+..+++..++..
T Consensus 329 ~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~---G~l~~-~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 329 WITRSLA-DQAEKAGSIQVAVIQLANTCGAAIG---GYALD-NIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccChhhHHHHHHHHHHHHH
Confidence 8888877 5566777877788889999999944 77888 7888888888776555443
No 5
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=6.2e-33 Score=262.16 Aligned_cols=356 Identities=18% Similarity=0.094 Sum_probs=252.5
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
....+...|.+.+++|.|+++++++.+...+...+..++.|+++||+|||+++..+.++..++ .++.++++++.+++.|
T Consensus 31 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (406)
T PRK11551 31 LQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVAR 110 (406)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 344667778888999999999999888777777777789999999999999999999888887 6788889999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
++.|++.+...+...+++. |++|+++|++++++.+.+..+|..+++.+++.+.+..+| +..+++.....++.
T Consensus 111 ~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 182 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTS------EAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW--RHIFYVGGVGPLLL 182 (406)
T ss_pred HHHHhhHHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH--HHHHHHHHHHHHHH
Confidence 9999999998787777777 999999999999999999999999999999988888888 88887766555544
Q ss_pred HHHHHHhccccCCCCCccCC-CCccchhhhhhhhccC---cchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cchh
Q psy10432 190 TLFIYFCWEEHYDPKTAKSS-LLPNSMFSSLKFLFTN---PCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLG 261 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g 261 (440)
.++....+||+++.++++++ ...++ ..+..+++ +..+.......+.....+.... +.|.+ +..+ .+.+
T Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~g~s~~~~~ 258 (406)
T PRK11551 183 VPLLMRWLPESRAFAQAAGAGKQRAP---VLRALFGEGRATATLLLWISYFFTLIVLYFLLN-WLPSLLVGQGLSRSQAG 258 (406)
T ss_pred HHHHHHhCCCChhHHhccCcchhhhh---hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCChhhhh
Confidence 55555567886543222111 01111 11222222 2233333333333333333333 44444 3333 6678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhh
Q psy10432 262 LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP 341 (440)
Q Consensus 262 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 341 (440)
.......++.++++++.|++.|| +++++.+..+.....++.+.+ ... ++ .+ ...+...+.+++.+...+
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~--~~-~~------~~~~~~~~~g~~~~~~~~ 327 (406)
T PRK11551 259 LVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAAL-AAA--PS-FA------GMLLAGFAAGLFVVGGQS 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHH-Hhc--Cc-HH------HHHHHHHHHHHHHHhHHH
Confidence 88889999999999999999998 998888776555554444333 111 11 11 122333344444555677
Q ss_pred hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
...++..+..|+++|+++.|+.+...+++..++|.+. |.+.+...++...+.....+.+++.+..+..
T Consensus 328 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~---g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 328 VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA---GQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhH---hhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7888899999999999999999999999999999954 6666633455666666665655555554443
No 6
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=258.13 Aligned_cols=351 Identities=11% Similarity=0.060 Sum_probs=252.8
Q ss_pred HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432 32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL 110 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 110 (440)
....+.+|.+.+|+|+|.++.+++.+.......+.+++.|+++||+|||+++..+..+.+++ .++++++|++.+++.|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 45778899999999999999999888777777777789999999999999999999999999 78999999999999999
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~~ 189 (440)
++|++.+...+...+.+. |++| ++|+++++....+...|..+|+.+++.+.++. +| |..+.......++.
T Consensus 106 l~Gig~~~~~~~~~~~~~------~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w--~~~~~~~~~~~~~~ 176 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIK------RRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW--YQTLAWWALPAVVA 176 (393)
T ss_pred HHHhHHHHHhhhhhHHHH------HHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHH
Confidence 999999998776555555 8886 78999999999999999999999999998875 78 66554433333322
Q ss_pred HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHH
Q psy10432 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSC 266 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~ 266 (440)
. +.++...+++++++++ ++. ..++.+++|+.+...+...+.....+......++++++++ .+.+...+.
T Consensus 177 ~-~~~~~~~~~~~~~~~~---~~~----~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~ 248 (393)
T PRK09705 177 L-FAWWWQSAREVASSHK---TTT----TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLAL 248 (393)
T ss_pred H-HHHHHHhcCCCccccC---CCc----CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHH
Confidence 2 2222222221111111 111 1234556777777666665555555555554555554444 667888999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432 267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL 346 (440)
Q Consensus 267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 346 (440)
..++.++++++.+++.|| .++++....+..+..++...+... +.... ... ..+.+++.+...|.....
T Consensus 249 ~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~------~~~--~~l~g~g~g~~~~~~~~~ 316 (393)
T PRK09705 249 MTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWL---PLQLP------VLW--AMVCGLGLGGAFPLCLLL 316 (393)
T ss_pred HHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHc---cchHH------HHH--HHHHHHhccchHHHHHHH
Confidence 999999999999999997 999988887776666655443211 11111 111 123344566666766555
Q ss_pred hccCC-cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 347 RGRII-PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 347 ~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
..+.. |++++++.+|+.+...+++..++|.+. +.+.|...++...|.+.+++++...+.......
T Consensus 317 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~---G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 317 ALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFS---GVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 55555 467899999999999999999999955 777773334788888887777766665555444
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1e-32 Score=264.51 Aligned_cols=362 Identities=13% Similarity=0.056 Sum_probs=247.3
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh-----hcccchhHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL-----TKFSSDFYI 104 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~-----~~~~~~~~~ 104 (440)
....++..|++.+|+|.|.++.|++.+.......+.+++.|+++||+|||+++..+.++.++. .. +..+++++.
T Consensus 45 r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (467)
T PRK09556 45 RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGL 124 (467)
T ss_pred hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 445667788888999999999999776666666666679999999999999998887776665 33 334789999
Q ss_pred HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCchhhHHH
Q psy10432 105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL---NLGPIAPFAV 181 (440)
Q Consensus 105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---gw~~~~~~~~ 181 (440)
+++.|+++|++.+...|...+.+. |++|+++|++++|+.+.+.++|.++++.+..++.+.. +| +..|.+
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~------~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~--~~~f~~ 196 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTIT------RWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV--IGMFIF 196 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHH------HHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc--hhHHHH
Confidence 999999999999998887666666 9999999999999999999999999999988777653 46 767766
Q ss_pred HHHHHHHHHHHHHHhccccCCCCC---------cc--CCC---Ccc--chhhhh-hhhccCcchHHHHHHHHHHHhHHHH
Q psy10432 182 AIPFLLGSTLFIYFCWEEHYDPKT---------AK--SSL---LPN--SMFSSL-KFLFTNPCLLTLGIVQSIYEGIMYT 244 (440)
Q Consensus 182 ~~~~~~~~~~~~~~~~~e~~~~~~---------~~--~~~---~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (440)
.+.+.++..++.++..+|++++.+ ++ ++. +.+ +..+.+ +..++||.+|...+..++.+...+.
T Consensus 197 ~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 276 (467)
T PRK09556 197 PSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIG 276 (467)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 665555444544555555432110 00 000 000 111112 2367889999888877777766665
Q ss_pred HHHhhhhhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhh
Q psy10432 245 FIFVWTPVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRV 319 (440)
Q Consensus 245 ~~~~~~~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (440)
.. .|.|.| +.++ .+.+.......++.+++.++.|+++|| +++|+...............+ .... ... ..
T Consensus 277 ~~-~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~~~~~-~~~~-~~~-~~- 350 (467)
T PRK09556 277 ID-NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALIIFTLG-VYQH-ATS-EY- 350 (467)
T ss_pred HH-HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHHHHH-HHHh-cCc-HH-
Confidence 53 456654 4444 566777888889999999999999998 998877655443333322111 1111 111 11
Q ss_pred cchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhhccccccCc-----------
Q psy10432 320 LSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIKNEDAEGGK----------- 387 (440)
Q Consensus 320 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~----------- 387 (440)
.......+.+++.............|..|++.+|++.|+.+...++ |..++|.++ |.+.|.
T Consensus 351 ----~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~---G~i~~~~~~g~~~~~~~ 423 (467)
T PRK09556 351 ----MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGL---GMIADPTKNGTPIFGYT 423 (467)
T ss_pred ----HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhH---HHHhccccccccccccc
Confidence 1222222222211111112235566889999999999999999997 668888855 555551
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 388 LIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
..+|+..|.+..++.+++.+..+.++
T Consensus 424 ~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 424 LTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999888888887766665553
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=4.1e-32 Score=255.88 Aligned_cols=362 Identities=12% Similarity=0.071 Sum_probs=252.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhHhhh-HhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh
Q psy10432 18 VRYFIPFFLATFSDWIQGPYVYKV-YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL 95 (440)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~ 95 (440)
.......++..++.++..|.+|.. .+++|.|+.++|++.++......+.+|+.|+++||+||||+++.+.++.+++ ..
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (399)
T PRK05122 18 VSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL 97 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH
Confidence 334455566666778888888763 4789999999999888888888888899999999999999999999888775 43
Q ss_pred hcc---c-----chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 96 TKF---S-----SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFF 167 (440)
Q Consensus 96 ~~~---~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (440)
+.+ . .+++.+++.|+++|++.+...+...+++. |+.|+|+|++++++.+....+|.++||.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGI------GRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHH------hhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 322 2 25678899999999999999887777777 999999999999999999999999999999999
Q ss_pred HhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432 168 ADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF 247 (440)
Q Consensus 168 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (440)
.+.+|| +..+.+.....++..+ .....||++++ ++ ++++ +++.++ +.+.......+..........
T Consensus 172 ~~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~---~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T PRK05122 172 YHWGGL--AGLGLLIMLLALLGLL-LARPRPAVPPV--KG---ERLP----FRRVLG--RVWPYGMGLALASIGFGTIAT 237 (399)
T ss_pred HHcccH--HHHHHHHHHHHHHHHH-HHhcCCCCCCC--Cc---cchh----HHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 999999 7666655544332222 22222222111 11 1111 222222 112211111122222222222
Q ss_pred hhhhhhhccC-CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432 248 VWTPVLEVLS-PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF 326 (440)
Q Consensus 248 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (440)
..+.++.+.+ ...+.......++.+++.++.+++.|| +++++.+..+.....++...+ ... ...+ ...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~ 306 (399)
T PRK05122 238 FITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLL-WLA---PSPW------MAL 306 (399)
T ss_pred HHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH-HHh---ccHH------HHH
Confidence 2233333333 455677778888899999999999997 999888777766666655443 211 1111 233
Q ss_pred HHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432 327 VAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL 406 (440)
Q Consensus 327 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (440)
....+.+++.+...|.......+..|+++||++.|+.+...++|..+++.+. +.+.+ ..+++..+...+++.+++.
T Consensus 307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~~~~~~~~~~~~~ 382 (399)
T PRK05122 307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLA---GLVAS-WFGYPSIFLAAALAALLGL 382 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HcCHHHHHHHHHHHHHHHH
Confidence 4444566667777777777777888999999999999999999999988844 66777 7789999998888877777
Q ss_pred HHHHHhhh
Q psy10432 407 LASCVFKR 414 (440)
Q Consensus 407 ~~~~~~~~ 414 (440)
+.....++
T Consensus 383 ~~~~~~~~ 390 (399)
T PRK05122 383 ALTWLLYR 390 (399)
T ss_pred HHHHHhcc
Confidence 66655544
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.9e-32 Score=258.89 Aligned_cols=361 Identities=12% Similarity=0.010 Sum_probs=250.0
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF 111 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 111 (440)
.....+|.+.+++|.|+++.+++.+...+...+.+++.|+++||+|||+++..+.++.+++ .+..++++++.+++.|++
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 120 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVL 120 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4567788888999999999999777777777777789999999999999999999999998 678889999999999999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
.|++.+...+...+++. |++|+++|++++++.+.+.++|..++|.+++.+.+.+|| |+.|.+.++..++..+
T Consensus 121 ~g~~~g~~~~~~~~~~~------~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw--~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 121 NAFFQGWGWPVCAKLLT------AWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW--RYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHccchHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH--HHHHHHHHHHHHHHHH
Confidence 99999988776666666 999999999999999999999999999999999998899 8888777665554444
Q ss_pred HHHHhccccCCCCC---------c--cCCCC----ccchhhhhh-hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-h
Q psy10432 192 FIYFCWEEHYDPKT---------A--KSSLL----PNSMFSSLK-FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-E 254 (440)
Q Consensus 192 ~~~~~~~e~~~~~~---------~--~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 254 (440)
+..+.+||++++.+ + +.+++ ..+.++.++ ..+++|.++...+...+.+..........++++ +
T Consensus 193 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 272 (434)
T PRK11663 193 FLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSE 272 (434)
T ss_pred HHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555666543210 0 00000 001111122 356778888776666555555544444334444 3
Q ss_pred ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc--CCchhHH-HHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432 255 VLS---PPLGLVFSCFMISIMIGSKIYSILILKYF--KPETMLT-LTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 255 ~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
..+ .+.+...+...++.++++++.|++.|| + ++|+... .......+....+ ...... .... ....
T Consensus 273 ~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-----~~~~ 343 (434)
T PRK11663 273 TLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGILLSVGSL-WLMPFA--SYVM-----QAAC 343 (434)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHHHHHHHHH-HHcccc--cHHH-----HHHH
Confidence 333 567778888889999999999999998 7 2333322 2222222222122 111111 1111 1111
Q ss_pred HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
....++..............|..|+++||++.|+.++..++|..++|.++ +.+.| ..+++..|...+++.+++.+.
T Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~---g~l~~-~~g~~~~f~~~~~~~~~~~~~ 419 (434)
T PRK11663 344 FFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPL---AKVLE-IWHWTGFFVVISIAAGISALL 419 (434)
T ss_pred HHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccH---HHHHH-hcccHHHHHHHHHHHHHHHHH
Confidence 11111111111122344567888999999999999999999999999955 77778 788999999888887777665
Q ss_pred HHHhhh
Q psy10432 409 SCVFKR 414 (440)
Q Consensus 409 ~~~~~~ 414 (440)
.+...+
T Consensus 420 ~~~~~~ 425 (434)
T PRK11663 420 LLPFLN 425 (434)
T ss_pred HHHHHh
Confidence 554443
No 10
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.5e-31 Score=252.50 Aligned_cols=337 Identities=11% Similarity=0.069 Sum_probs=246.0
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
+..+..|.++.+.+++|.|+.+.++..+...+...+..++.|+++||+||||++..+.....++ ....++++++.+++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 107 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLL 107 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 3566777888888999999999998777777666676789999999999999999999888888 677888999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
|+++|++.+...+...+.+. |.+|+++|.+..++......+|..+||.+++.+.++.+| +..+++.+...++
T Consensus 108 ~~l~G~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w--~~~~~~~~~~~~~ 179 (406)
T PRK15402 108 RFLQGIGLCFIGAVGYAAIQ------ESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW--RGMFVLFAALAAL 179 (406)
T ss_pred HHHHHhHhhhHHHHHHHHHH------HHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc--cHHHHHHHHHHHH
Confidence 99999999887666656666 999999999999999888889999999999999998899 7777776666665
Q ss_pred HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHH
Q psy10432 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVF 264 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~ 264 (440)
..+..++..||++++++++ .+.++..++++.+++||+++...+...+.......+....+.++ +..+ .+.+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~ 257 (406)
T PRK15402 180 SFFGLWRAMPETAGRVGEK--LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQ 257 (406)
T ss_pred HHHHHHHhCCCCCcccccc--ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHH
Confidence 5555555667765432221 12234456778889999988876666555544444433233333 3233 4566666
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432 265 SCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG 344 (440)
Q Consensus 265 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (440)
....++.+++.++.+++.|| .++++.+..+.....++...+..........+. .......+.+++.+...+...
T Consensus 258 ~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~g~g~~~~~~~~~ 331 (406)
T PRK15402 258 VPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGLLLAALATVISSHAYL-----WLTAGLSLYAFGIGLANAGLY 331 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHcccccHH-----HHHHHHHHHHHHHHHHhhhHH
Confidence 77777888999999999997 999888887776666555444221111111111 234455556666666666555
Q ss_pred hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432 345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 386 (440)
...... +++++|++.+..+....++..+++.+. +.+.+
T Consensus 332 ~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~---~~l~~ 369 (406)
T PRK15402 332 RLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELS---KHAYL 369 (406)
T ss_pred HHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHH---Hhccc
Confidence 555444 458999999999999999999999844 55555
No 11
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.7e-32 Score=258.42 Aligned_cols=363 Identities=13% Similarity=0.099 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-
Q psy10432 20 YFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK- 97 (440)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~- 97 (440)
.+...++..++.++..+.+|.+.++++.++.+.|++.....+...+.+++.|+++||+|||+++..+..+.+++ ....
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 33444566666777888887777888889999999888777777777789999999999999998887777665 3222
Q ss_pred ----ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 98 ----FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 98 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
..++++.+++.|++.|++.+...++..+.+. |+.|+++|+++.++.....++|..+||.+++.+.+..+|
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~ 175 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATP------ALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGV 175 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh------hccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhh
Confidence 2567889999999999999888776666666 999999999999999999999999999999999998888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432 174 GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL 253 (440)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (440)
++.+.+.....++..+ ....+||++++++++ +...++.++.++.++++|.++...+...+... ...... +.|.+
T Consensus 176 --~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~p~~ 249 (417)
T PRK10489 176 --AWNYGLAAAGTFITLL-PLLRLPALPPPPQPR-EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRV-LYPAL 249 (417)
T ss_pred --HHHHHHHHHHHHHHHH-HHHhCCCCCCCCccc-ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHH-hhHHH
Confidence 6666666555544333 344567654332221 11233445567778888887665544433222 222323 33444
Q ss_pred -hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432 254 -EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 254 -~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
++ .+ ...+++.+...++.+++.++.+++.|| .++++.+..+..+..++.+.+ .. .++ +. .....
T Consensus 250 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~-~~--~~~--~~-----~~~~~ 318 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLF-GL--MPM--WI-----LAVLC 318 (417)
T ss_pred HHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHH-Hc--cch--HH-----HHHHH
Confidence 33 33 567888889999999999999999996 777777766666555554333 21 111 11 23344
Q ss_pred HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
..+.+++.+...+...+++++..|++.||+++|+.+...++|..++|.+. |.+.+ ..++...+...+++.++..++
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~---G~l~~-~~g~~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 319 LALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL---GGLGA-MMTPVASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH---HHHHH-HhchhhHHHHHHHHHHHHHHH
Confidence 44555556666677778899999999999999999999999999999955 77777 777777777666554444333
Q ss_pred H
Q psy10432 409 S 409 (440)
Q Consensus 409 ~ 409 (440)
.
T Consensus 395 ~ 395 (417)
T PRK10489 395 L 395 (417)
T ss_pred H
Confidence 3
No 12
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1e-31 Score=252.46 Aligned_cols=359 Identities=12% Similarity=0.109 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhh-HhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh-
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKV-YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL- 95 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~- 95 (440)
......+...++.++..|.+|.. .+|+|.|++++|++.++......+.+|++|+++||+||||+++.+.+...++ +.
T Consensus 19 ~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 19 RIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 34444555566677788888654 4789999999999999988888888899999999999999999887776654 22
Q ss_pred --hc-----ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 96 --TK-----FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 96 --~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
.. ..++++.+++.|+++|++.+...+...+++. |+.|+|+|++++++.+.+.+.|..+||++++.+.
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGL------GLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1357889999999999999988777666777 9999999999999999999999999999999999
Q ss_pred hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432 169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248 (440)
Q Consensus 169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (440)
++.|| +..+.+.....++... .....||.++++ + ++++.++..+.+++ +.+. ..+...........
T Consensus 173 ~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~-----~~l~~~~~~~~~~~ 238 (392)
T PRK12382 173 SHFGF--AALALTTMVLPLLAWA-FNGTVRKVPAHA--G---ERPSLWSVVGLIWK-PGLG-----LALQGVGFAVIGTF 238 (392)
T ss_pred hccCh--HHHHHHHHHHHHHHHH-HHHhccCCCCCc--c---cCchHHHHHHHHHH-hHHH-----HHHHHHHHhHHHHH
Confidence 98899 6655544433322221 122223322211 1 11122222222222 2211 11111122222222
Q ss_pred hhhhhhccC-CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 249 WTPVLEVLS-PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 249 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
.++++++.+ ...+.......++.+++++..|++.|| +++++.+..+..+..++.+.+ ... ++ .+ ....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~--~~-~~------~~~~ 307 (392)
T PRK12382 239 VSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLL-WLA--PT-AW------VALA 307 (392)
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHH-HHc--cc-HH------HHHH
Confidence 334444333 445666777788888999999999997 999998887777666665443 221 11 11 2334
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
...+.+++.+...|.......+..|+++||++.|+.+...+++..++|.+. +.+.+ ..+++..|...+++.+++.+
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~---g~l~~-~~g~~~~~~~~~~~~~~~~~ 383 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLA---GMLAT-SFGYPSVFLAGAISAVLGII 383 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCchHHHHHHHHHHHHHHH
Confidence 444556667777787778888888999999999999999999999999854 77777 78899999999888777766
Q ss_pred HHHHh
Q psy10432 408 ASCVF 412 (440)
Q Consensus 408 ~~~~~ 412 (440)
.....
T Consensus 384 ~~~~~ 388 (392)
T PRK12382 384 VTILS 388 (392)
T ss_pred HHHhh
Confidence 65543
No 13
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=8.5e-32 Score=254.76 Aligned_cols=365 Identities=15% Similarity=0.152 Sum_probs=260.9
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhh-----HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKN-----IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL 95 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~ 95 (440)
...+....+..+..+++|.+.+++|.+..+ .+++.++..+...+.+|+.|+++||+|||+.++.+.++.+++ .+
T Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 100 (408)
T PRK09874 21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL 100 (408)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH
Confidence 444555556777889998888999988654 367788888888888899999999999999999999888888 67
Q ss_pred hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q psy10432 96 TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGP 175 (440)
Q Consensus 96 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 175 (440)
+.+.++++.+++.|++.|++.+. .+...+.+. |..|+++|++++++......+|..++|.+++.+.+..+|
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-- 171 (408)
T PRK09874 101 MGLAQNIWQFLILRALLGLLGGF-VPNANALIA------TQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGL-- 171 (408)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHH------HhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--
Confidence 77889999999999999998664 465555555 999999999999999999999999999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHH-HHHHHhHHHHHHHhhhhhhh
Q psy10432 176 IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIV-QSIYEGIMYTFIFVWTPVLE 254 (440)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 254 (440)
+..+.+.....++..+...+..||++++++++ +..+.+ +..+.+++|+++..... ...............+++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T PRK09874 172 RPVFFITASVLFLCFLVTLFCIRENFQPVSKK---EMLHMR-EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVR 247 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccccch---hhhHHH-HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777666655555556667654332221 111112 23345667776553322 22222222222222222222
Q ss_pred c-cC--C----chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 255 V-LS--P----PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 255 ~-~~--~----~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
. .+ . ..+......+++.+++.+..|++.|| +++++.+..+.....+..+.. ... ...+ ....
T Consensus 248 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~~ 316 (408)
T PRK09874 248 ELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPM-SFV---QTPL------QLGI 316 (408)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHH-HHh---ccHH------HHHH
Confidence 1 11 1 23455566778888899999999997 999998887776655544333 211 1111 2333
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
...+.+++.+...|...+...+..|++.+|+.++..+...++|..++|.+. |.+.+ ..+++..|.+.+++.+++.+
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~---G~l~~-~~g~~~~f~~~~~~~l~~~~ 392 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMG---AAISA-NYGFRAVFLVTAGVVLFNAV 392 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHH---HHHHh-hcchhHHHHHHHHHHHHHHH
Confidence 444556667778888888888888999999999999999999999999943 77777 78899999999888888776
Q ss_pred HHHHhhh
Q psy10432 408 ASCVFKR 414 (440)
Q Consensus 408 ~~~~~~~ 414 (440)
..+...+
T Consensus 393 ~~~~~~~ 399 (408)
T PRK09874 393 YSWNSLR 399 (408)
T ss_pred HHHHHHH
Confidence 6654443
No 14
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.3e-32 Score=255.86 Aligned_cols=353 Identities=15% Similarity=0.081 Sum_probs=261.2
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
.....+..|.+.+++|.|+++++++.++......+.+|+.|+++||+|||+++..+.++.+++ .++++++|++.+++.|
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334667888888999999999999888888888888889999999999999999999999998 7888999999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
++.|++.+...+.....+. +++| |+|+++.++...+.++|..+++++.+.+.+..|| |+.|++.++..++.
T Consensus 99 ~~~g~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~f~~~~~~~~~~ 169 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAV------KWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGV--PAAFIYMGIIFLLV 169 (377)
T ss_pred HHHhHHHHHHHHhHHHHHH------HHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccH--HHHHHHHHHHHHHH
Confidence 9999999987665555544 7775 6899999999999999988877777777777788 88888877776666
Q ss_pred HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHH
Q psy10432 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSC 266 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~ 266 (440)
.+..++..||++++++++++ +.++...+.++.+++|+++...+...+...........++++.+..+ .+.+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T TIGR00890 170 IVLGAFLIGYPPGQLIKTNI-EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSI 248 (377)
T ss_pred HHHHHHheecCchhccccCc-ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 65555566655433222111 11111234567788888887665555444443333333444433333 456778888
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432 267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL 346 (440)
Q Consensus 267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 346 (440)
..++.++++++.+++.|| +++|+.+..+.....++.+.+ ...... ... .......+.+++.|...+....+
T Consensus 249 ~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~----~~~~~~~~~g~~~g~~~~~~~~~ 319 (377)
T TIGR00890 249 SSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAM-LFIPML---NDV----LFLATVALVFFTWGGTISLFPSL 319 (377)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHH-HHcccc---hhH----HHHHHHHHHHHHhccchhccHHH
Confidence 899999999999999998 999988887777666665444 221111 111 12222334445566666677778
Q ss_pred hccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432 347 RGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL 406 (440)
Q Consensus 347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (440)
..|..|+++|++..|+.+...++|..++|.+. +.+.+ ..+++..|.+.+++.+++.
T Consensus 320 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 320 VSDIFGPANSAANYGFLYTAKAVAGIFGGLIA---SHALT-EIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH---HHHHh-hhchhhHHHHHHHHHHHhc
Confidence 88999999999999999999999999999854 66777 7788999988887766654
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.1e-31 Score=247.67 Aligned_cols=346 Identities=10% Similarity=0.014 Sum_probs=236.3
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHhhh-hcccchhHHHHHHHHH
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCL-TKFSSDFYILLYGRLF 111 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 111 (440)
.+.+.+|.+.+|+|+|+++.|++.+.......+.+++.|+++||+|||+++..+......+.+ ....+|++.+++.|++
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 88 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLL 88 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 367889899999999999999855544444444445899999999999887655544444432 3333799999999999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
+|++.+.. +...+.+. |++|+|+|++++++.+.+..+|..+++++++.+.+.+|| |..|++.+.+.++..+
T Consensus 89 ~G~g~~~~-~~~~~~~~------~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW--r~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 89 AALGQPFL-LNAFAPAA------SQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGL--QLLIIPIAAVAAAGII 159 (368)
T ss_pred HHhHhHHH-HHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--HHHHHHHHHHHHHHHH
Confidence 99999864 33333344 999999999999999999999999999999999999899 8888887776666666
Q ss_pred HHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC--CchhhHHHHHH
Q psy10432 192 FIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS--PPLGLVFSCFM 268 (440)
Q Consensus 192 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~g~~~~~~~ 268 (440)
+.++.+||++++++++. +.++..++++++++||.+|...+..++.....+.+.+ |.|.+ ++.+ ...+.......
T Consensus 160 ~~~~~lp~~p~~~~~~~--~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~-wlp~~L~~~g~s~~~~~~~~l~~ 236 (368)
T TIGR00903 160 LVLAALPALPFQAAEGF--GFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAI-WLEAALRPAGLEDIAGDAVALAI 236 (368)
T ss_pred HHHHHcCCCCCCCCCCc--chHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCChHHHHHHHHHH
Confidence 66778898765432211 1112234577899999999998888888888887766 55554 4433 22344444444
Q ss_pred HHHHHHHHHHHHHHhhccCCc---hhHHH-HHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432 269 ISIMIGSKIYSILILKYFKPE---TMLTL-TVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG 344 (440)
Q Consensus 269 ~~~~~~~~~~g~l~~r~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (440)
+...++ .+++.|| ..|+ +.... .....++....+ . . ..... .......+.+++.....+..+
T Consensus 237 ~~g~~g---~~~~~d~-~~r~~~r~~~~~~~~~~~a~~~~~~-~--~-~~~~~------~~~~~~~l~~~~~~~~~~~~~ 302 (368)
T TIGR00903 237 LAGLIG---VAVIPDR-VARAGLRSIYIRAAALLIAAFFLAL-A--F-ELNRL------ALFAFIGIAGLLMLPAYAIIM 302 (368)
T ss_pred HHHHHH---HHHhhHH-hhhhhhHHHHHHHHHHHHHHHHHHH-H--H-ccccH------HHHHHHHHHHHhhhhhHHHHH
Confidence 444444 5677776 5433 22221 222222222111 1 1 11111 122233334444555667778
Q ss_pred hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
++.+|..|++.||++.|+.+..+++++..+|... +.... +....|.+.++..+++.+...
T Consensus 303 ~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~---~~~~~---~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 303 DWIGKFCDKELHGKAAGAIGFTSRAISVALALAA---MLFIS---SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHhcchhhcCcccchhhHHHHHHHHHHHHHH---HHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999855 22221 556777777777777666554
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=9.4e-32 Score=253.46 Aligned_cols=361 Identities=13% Similarity=0.040 Sum_probs=261.1
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
........|.+.+++|.|+.+.+++.++..+...+..++.|+++||+|||+++..+.++.+++ .+.+++++++.+++.|
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR 89 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 344666677788999999999999888888887777889999999999999999999998888 6788889999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
++.|++.+...+...+++. |++|+|+|++.+++.+...++|..++|.+++.+.+..+| ++.|...+...++.
T Consensus 90 ~l~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 90 VLLGAAEAPFFPGIILIVA------SWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSW--QWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHhhhhHHHHHHH------HhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHHH
Confidence 9999999999887777777 999999999999999999999999999999999998899 88887777666655
Q ss_pred HHHHHHhccccCCCCCccCC-----------------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432 190 TLFIYFCWEEHYDPKTAKSS-----------------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV 252 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (440)
.+...+..||++++++..++ ++.++..+..++.+++|+++...+..++.......+....+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (399)
T TIGR00893 162 GVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTY 241 (399)
T ss_pred HHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 55555556665432211000 0001112345677888888887777777666666555544444
Q ss_pred h-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH-HHHHHHHHHHHH--HHHHhhhccccchhhcchhHH
Q psy10432 253 L-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML-TLTVYLATFSIT--VSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 253 ~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 325 (440)
+ +..+ .+.+.......++.+++.++.+++.|| +++|+.. ...........+ .......... .... ..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 315 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAIIAGLVLSLLMFATNYV-NIPY----AA 315 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHHHHHHHHHHHHHHhccc-hhHH----HH
Confidence 4 2223 567888888899999999999999997 8887521 111111111111 1101111101 1111 12
Q ss_pred HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hhHHHHHHHHHHHH
Q psy10432 326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IHSVFVVCTACLLV 404 (440)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 404 (440)
.....+..++.+ ..+....+..|..|+++|+++.|+.+...+++..++|.+. +.+.+ ..+ ++..+.+.+++.++
T Consensus 316 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~---g~l~~-~~g~~~~~~~~~~~~~~~ 390 (399)
T TIGR00893 316 LALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI---GAIAA-TTGSFAGALMVVAALALI 390 (399)
T ss_pred HHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh---hhhcc-CCCchhHHHHHHHHHHHH
Confidence 222222223333 6788889999999999999999999999999999999954 77777 666 88888888877776
Q ss_pred HHHHHH
Q psy10432 405 ALLASC 410 (440)
Q Consensus 405 ~~~~~~ 410 (440)
+.+...
T Consensus 391 ~~~~~~ 396 (399)
T TIGR00893 391 GALSYL 396 (399)
T ss_pred HHHHHH
Confidence 665543
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=6.6e-31 Score=246.77 Aligned_cols=336 Identities=14% Similarity=0.140 Sum_probs=249.9
Q ss_pred HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432 25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY 103 (440)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~ 103 (440)
.....+..+..|..|.+.+++|.|+++++++.+.......+.+++.|+++||+|||+.+..+.++..++ .+..++++++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 333445677888888888999999999999777777777777789999999999999999999998888 6788889999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432 104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI 183 (440)
Q Consensus 104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 183 (440)
.+++.|++.|++.+...+..++++. |++|+++|++++++.+....+|..+||.+++.+.++.+| +..+....
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~--~~~~~~~~ 166 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVR------DIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW--HAIFAFLS 166 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHH------HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--HHHHHHHH
Confidence 9999999999999998887777777 999999999999999999999999999999999998899 88887776
Q ss_pred HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP 259 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 259 (440)
...++..+...+..||++++++++ +.++..+.+++.++||+++...+...+.....+.+....+.++ +..+ .+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPYEARI---QISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV 243 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCCcccC---CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence 666655555555667765433322 2233345677888999988877666665555555544333333 2333 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY 339 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 339 (440)
.+.......++.++++++.+++.|| +++|+.+..+.....++...+ ............ .......+.+++.+..
T Consensus 244 ~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~g~~~~~~ 317 (385)
T TIGR00710 244 FGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSAVLL-EITAILGLGSWA----MIIGPMMFVGIGNSMI 317 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH-HHHHHhccchHH----HHHHHHHHHHHHHHHH
Confidence 7888888899999999999999997 999988887766666655444 221111111111 2233334455566667
Q ss_pred hhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 340 CPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 340 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
.+.......|..| ++++++.++.+.....++.+.+..+
T Consensus 318 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~ 355 (385)
T TIGR00710 318 SSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV 355 (385)
T ss_pred HHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777766 6789999999988876655555534
No 18
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.3e-31 Score=249.57 Aligned_cols=349 Identities=13% Similarity=0.098 Sum_probs=246.1
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
....+...|.+.+|+|.|+++++++.++.+....+.+++.|+++||+|||+++..+.++.+++ .++++++|++.+++.|
T Consensus 24 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 103 (412)
T TIGR02332 24 RINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLR 103 (412)
T ss_pred hhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 444566777788999999999999777766666666679999999999999999999999998 6788899999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------hcccCchhhHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD------ILNLGPIAPFAVAI 183 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~gw~~~~~~~~~~ 183 (440)
+++|++.+...|...+++. |++|+++|++++++.+.+.++|..+++.+++++.+ ..|| |+.|.+.+
T Consensus 104 ~l~G~~~~~~~~~~~~~~~------~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gw--r~~f~~~~ 175 (412)
T TIGR02332 104 ILVGIAEAGFLPGILLYLT------FWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGW--QWLFLLEG 175 (412)
T ss_pred HHHHHHHhhHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccch--hHHHHHHH
Confidence 9999999998776666666 99999999999999999999999999999998875 3578 88888877
Q ss_pred HHHHHHHHHHHHhccccCCCCC-----ccC--------C------CC---cc---chhhhhhhhccCcchHHHHHHHHHH
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKT-----AKS--------S------LL---PN---SMFSSLKFLFTNPCLLTLGIVQSIY 238 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~-----~~~--------~------~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (440)
...++..++.++++||++++.+ +++ + .+ .+ ...+.++.++ +|.++...+...+.
T Consensus 176 ~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 254 (412)
T TIGR02332 176 FPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCL 254 (412)
T ss_pred HHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHH
Confidence 7766556666667788764321 000 0 00 00 0012234444 47777777666666
Q ss_pred HhHHHHHHHhhhhhhhcc--C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH-HHHHHHHHHHHHHHHHhhhc
Q psy10432 239 EGIMYTFIFVWTPVLEVL--S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML-TLTVYLATFSITVSTVLTSS 312 (440)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~--~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 312 (440)
....+.+....+++++.. + .+.+.......++.+++.++.|++.|| +++|+.. ........++. .+ ... .
T Consensus 255 ~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~~~~-~~-~~~-~ 330 (412)
T TIGR02332 255 TNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAAAGW-LL-ASA-T 330 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHHHHH-HH-HHh-c
Confidence 666666656555555442 2 456778888999999999999999997 9877643 33333333222 11 111 1
Q ss_pred cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhh
Q psy10432 313 LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIH 392 (440)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 392 (440)
.. .. .....+.+..++.....+.......+..|+++|+++.|+.+...++|..++|.+. +.+.|...+|+
T Consensus 331 ~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~---g~i~~~~g~~~ 400 (412)
T TIGR02332 331 DH-NL------IQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLI---GILKDATGSFN 400 (412)
T ss_pred CC-HH------HHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhc---ccccccCCCCc
Confidence 11 11 1111122221222222334445556778999999999999999999999999955 67777333588
Q ss_pred HHHHHHHHHH
Q psy10432 393 SVFVVCTACL 402 (440)
Q Consensus 393 ~~~~~~~~~~ 402 (440)
..+.+++++.
T Consensus 401 ~~~~~~~~~~ 410 (412)
T TIGR02332 401 SGLWFVAALL 410 (412)
T ss_pred hhHHHHHHHH
Confidence 8887766543
No 19
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=6.2e-31 Score=247.50 Aligned_cols=373 Identities=13% Similarity=0.155 Sum_probs=252.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh-
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT- 96 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~- 96 (440)
...+..+....+++...++++++.+|+|.|+++.+++.+.......+.+|+.|+++||+||||++..+..+.+++ .++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~ 96 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFI 96 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 334444555556666777887888999999999999777777777777789999999999999999999888887 433
Q ss_pred --cc-cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcc
Q psy10432 97 --KF-SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA-IVSGFTAHFFADILN 172 (440)
Q Consensus 97 --~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~g 172 (440)
.. .++++.+++.|+++|++.+...+...+.+. +++|+|+|++++|+.+...++|. +++|.+++.+.+.+|
T Consensus 97 ~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 97 VFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVV------YNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 23 357888899999999998887666566666 99999999999999999999996 689999999988888
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432 173 LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV 252 (440)
Q Consensus 173 w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (440)
| +..++.......+..++..+..+|.+++++++++.+.++..+.++.+++||+++...+..++.....+.... +.|.
T Consensus 171 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~ 247 (402)
T TIGR00897 171 E--MNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAV-FLPM 247 (402)
T ss_pred h--HHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 6 433333322222223333334444322221111112233345567788999998877666665565555544 4454
Q ss_pred h-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH-HHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 253 L-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT-LTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 253 ~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
+ +..+ .+.+.......++.+++++..|++.|| +++|+... .+.....+....+............ ....
T Consensus 248 ~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~-----~~~~ 321 (402)
T TIGR00897 248 FVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFA-----VALI 321 (402)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHH-----HHHH
Confidence 4 4444 556677778889999999999999998 98887653 2222333322222111111111111 1223
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
...+.+++.+...+. .....+. ++++||++.|+.+...+++..++|.+. +.+.+ ..++...+.+.+++.+++.+
T Consensus 322 ~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~---g~l~~-~~g~~~~~~~~a~~~~i~~~ 395 (402)
T TIGR00897 322 IAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIA---VLFIG-FFGAIGVVWIFAALYVVSAF 395 (402)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHH---HHHHh-hcchHHHHHHHHHHHHHHHH
Confidence 333344444444443 3455565 456899999999999999999999954 77777 77888999988888777766
Q ss_pred HHHHh
Q psy10432 408 ASCVF 412 (440)
Q Consensus 408 ~~~~~ 412 (440)
...+.
T Consensus 396 ~~~~~ 400 (402)
T TIGR00897 396 LTAFI 400 (402)
T ss_pred HHHHh
Confidence 65544
No 20
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=3.9e-31 Score=247.27 Aligned_cols=361 Identities=10% Similarity=0.106 Sum_probs=255.0
Q ss_pred HHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccch
Q psy10432 23 PFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSD 101 (440)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~ 101 (440)
..+.....+....+.+|.+.+|+|.|.++.++..+.......+.+|+.|+++||+|||+++..+..+.+++ .++++++|
T Consensus 11 ~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~ 90 (382)
T PRK10091 11 GTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSS 90 (382)
T ss_pred HHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 33444445667888998999999999999998777777777777789999999999999999999999998 78889999
Q ss_pred hHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHH
Q psy10432 102 FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV 181 (440)
Q Consensus 102 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~ 181 (440)
++.+++.|+++|++.+...+...+.+. |+.|+++|+++++....+..+|..+||++++.+.+..|| |+.|.+
T Consensus 91 ~~~l~~~r~l~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw--r~~f~~ 162 (382)
T PRK10091 91 YLMLAIGRLVSGFPHGAFFGVGAIVLS------KIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW--RYTFLL 162 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHH------HhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH--HHHHHH
Confidence 999999999999999987665555555 999999999999999999999999999999999998899 888888
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh-ccC---
Q psy10432 182 AIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE-VLS--- 257 (440)
Q Consensus 182 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 257 (440)
.+....+..+..++.+||.++++++ +.++.+ +.+++++.+.......+.+...+....+.+|++. ..+
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 234 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG-------GLREQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSE 234 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc-------CHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 7776665555555667775432111 112233 3456677766555444444444443344556663 333
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh-
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV- 336 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 336 (440)
.+.++......++.++++++.+++.|| +++++.+..+..+..++.+.+..... . .+ .......+...+.
T Consensus 235 ~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~~~~~~~~--~-~~------~~~~~~~~~~~g~~ 304 (382)
T PRK10091 235 TSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALLMLFFFGG--M-KT------ASLIFAFICCAGLF 304 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHHHHHHHHh--h-HH------HHHHHHHHHHHHHH
Confidence 567888899999999999999999997 99998888777666665543311111 1 11 1122222222222
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+...+......++..|++.++... .+...++|..++|.+. |.+.|...+|+..+...++..++.........+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~---G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 305 ALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCG---GMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred hhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHh---HHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 223333334555555556666553 3667889999999944 777774568889999887776666555444433
No 21
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=9.1e-31 Score=249.98 Aligned_cols=358 Identities=10% Similarity=0.030 Sum_probs=239.1
Q ss_pred hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chhHHHHHHH
Q psy10432 35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDFYILLYGR 109 (440)
Q Consensus 35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~~~l~~~r 109 (440)
....|.+.++ |.|+++.++..+...+...+.+++.|+++||+|||++++.+.++.+++ +.+++. ++++.+++.|
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL 127 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH
Confidence 4556666677 999999999888888887888889999999999999999999888887 555543 4788889999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA-IVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
++.|++.+...|...+.+. |++|+++|++++++.+.+.++|. +.+|+++..+....+| |..|++.+.+.++
T Consensus 128 ~l~gi~~g~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw--~~~f~i~~~~~~~ 199 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMV------HWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW--HAALYMPAFAAIL 199 (452)
T ss_pred HHHHHHHhccchHHHHHHH------HhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH--HHHHHHHHHHHHH
Confidence 9999999988776666666 99999999999999999999986 4566654444444588 8888877766665
Q ss_pred HHHHHHHhccccCCCCC----c--cC--------C-CCccchhhhh-hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432 189 STLFIYFCWEEHYDPKT----A--KS--------S-LLPNSMFSSL-KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV 252 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~----~--~~--------~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (440)
..++..+.+||++++.. + ++ + .+..+.++.+ +.++|||.+|...+..++.+...+......|++
T Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~ 279 (452)
T PRK11273 200 VALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTY 279 (452)
T ss_pred HHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666677654210 0 00 0 0001112222 346788999888777777776666655544444
Q ss_pred hh-ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccC--CchhHHH-HHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432 253 LE-VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFK--PETMLTL-TVYLATFSITVSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 253 ~~-~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (440)
++ ..+ .+.+.......++.+++.++.|++.|| ++ ++..... ...+..++.+.+ ... ... .... .
T Consensus 280 l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~-~~~-~~~-~~~~-----~ 350 (452)
T PRK11273 280 LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVY-WLN-PAG-NPTV-----D 350 (452)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHH-HHh-ccc-ChHH-----H
Confidence 53 233 566777778888999999999999997 74 3332221 112222222111 111 111 1111 1
Q ss_pred HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHH-HHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432 326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCF-TLIFIKNEDAEGGKLIAIHSVFVVCTACLLV 404 (440)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (440)
.......+.......+.......|..|++.+|++.|+.+...++++.+ +|.+. +...| ..+++..|.++++.+++
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~---g~l~~-~~g~~~~f~~~~~~~~~ 426 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV---GYTVD-FFGWDGGFMVMIGGSIL 426 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH---HHHHH-HhcchHHHHHHHHHHHH
Confidence 122222222111112233345678889999999999999998888765 67744 67777 77899999988888887
Q ss_pred HHHHHHHhhh
Q psy10432 405 ALLASCVFKR 414 (440)
Q Consensus 405 ~~~~~~~~~~ 414 (440)
+.+......+
T Consensus 427 ~~~~~~~~~~ 436 (452)
T PRK11273 427 AVILLIVVMI 436 (452)
T ss_pred HHHHHHHHhc
Confidence 7776665554
No 22
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2.1e-30 Score=244.05 Aligned_cols=353 Identities=13% Similarity=0.088 Sum_probs=241.4
Q ss_pred HHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHH
Q psy10432 29 FSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLY 107 (440)
Q Consensus 29 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~ 107 (440)
....+..|.+|.+.+++|.+.++.++..++.++...+.+++.|+++||+|||++++.+..+.+++ .++.+++|++.+++
T Consensus 30 ~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~ 109 (413)
T PRK15403 30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLI 109 (413)
T ss_pred HHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 34667888898889999999999988666555555555669999999999999999999999988 78888999999999
Q ss_pred HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
+|+++|++.+...+...+.+. |++|+++|++++++......+|..+||.+++.+.++.|| |+.|++..+..+
T Consensus 110 ~r~l~Gi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw--~~~f~~~~~~~~ 181 (413)
T PRK15403 110 ARFIQGTSICFIATVGYVTVQ------EAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW--KVLFAIIAVMGL 181 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHH
Confidence 999999998876444334444 999999999999999999999999999999999998899 888888777766
Q ss_pred HHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhH
Q psy10432 188 GSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLV 263 (440)
Q Consensus 188 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~ 263 (440)
+..+..++.+||++++++++ ...++..++++.+++||.++...+...+.....+.+....|.++ +..+ .+.++.
T Consensus 182 i~~~~~~~~lp~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~ 259 (413)
T PRK15403 182 IAFVGLLLAMPETVKRGAVP--FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWT 259 (413)
T ss_pred HHHHHHHHhCCCCccccCCC--CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHH
Confidence 65555555678865432221 12233456778889999999877777776666665544333344 3333 567777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhh-hccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432 264 FSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLT-SSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV 342 (440)
Q Consensus 264 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 342 (440)
......+.++++.+.+++.+| ..+++..........++...+.... ..++ .+. .......+++++.+...|.
T Consensus 260 ~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~-~~~-----~~~~~~~l~~~G~~~~~p~ 332 (413)
T PRK15403 260 QVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLVGLALLIVGNLLWPH-VWL-----WSVLGTSLYAFGIGLIFPT 332 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHccc-cHH-----HHHHHHHHHHHHHHHHhHH
Confidence 777778888888888887764 4444443332222222222221110 1111 111 1344555566677777776
Q ss_pred HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432 343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLV 404 (440)
Q Consensus 343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (440)
........ .+..+|++.++.+.....+...++... +...+ . +....|...+++..+
T Consensus 333 ~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~---g~~~~-~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 333 LFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIG---RWLWF-N-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHH---HHHHH-c-CCchHHHHHHHHHHH
Confidence 66433221 223468888888888877777777632 44433 2 335555555544443
No 23
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.6e-31 Score=247.61 Aligned_cols=344 Identities=17% Similarity=0.188 Sum_probs=257.8
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS 100 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~ 100 (440)
...+....+..+..+.+|...++++.++.+++++.++......+.+|+.|+++||+||||+++.+..+..++ .+..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 85 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVA 85 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666777778887777889999999999888888888888899999999999999999998888776 5555555
Q ss_pred -----hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q psy10432 101 -----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGP 175 (440)
Q Consensus 101 -----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 175 (440)
+++.+++.|++.|++.+...+...+++. |+.|+++|++.+++.+...++|.++||.+++.+.+..||
T Consensus 86 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~-- 157 (365)
T TIGR00900 86 LLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP------DLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI-- 157 (365)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 9999999999999999999887777777 999999999999999999999999999999999999899
Q ss_pred hhhHHHHHHHHHHHHHHHHHh-ccccCCCCCccCC-CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432 176 IAPFAVAIPFLLGSTLFIYFC-WEEHYDPKTAKSS-LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL 253 (440)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (440)
+..++......++..+..... .||++++++++.+ +..++..+.++.+++||.++...+...+...........+.|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (365)
T TIGR00900 158 KWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYV 237 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 877777665554443333322 2333221111111 11233455677788999988877766666655554442345555
Q ss_pred -hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432 254 -EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 254 -~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
++ .+ .+.+.......++.+++.++.+++.|| .++++.+..+.....+....+ .+... . . . .....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~-~----~~~~~ 307 (365)
T TIGR00900 238 QSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGLAILVV-GLTPP--N-F-P----LFLVL 307 (365)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHH-Hhhch--h-H-H----HHHHH
Confidence 22 23 667888888999999999999999997 988888777665555544333 21111 1 1 1 34445
Q ss_pred HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432 329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 386 (440)
..+.+++.+...+...++..|..|+++|+++.|+.+...+++..++|.+. |.+.|
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~---g~l~~ 362 (365)
T TIGR00900 308 WFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA---GPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 55666777888888899999999999999999999999999999999844 44444
No 24
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=7.6e-31 Score=252.60 Aligned_cols=331 Identities=12% Similarity=0.073 Sum_probs=243.0
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
..+...+..|.+.+++|.++.+.+++.+...+...+..+++|+++||+|||++++.+..+.+++ .++.++++++.+++.
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLA 104 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 3556778888888999999999988766666655666689999999999999999998888887 677788999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
|+++|++.+...|...+.+. |.+|+++|+++.+......++|..+||.+++.+.++.|| |+.|.+......+
T Consensus 105 ~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw--~~~f~~~~~~~~l 176 (471)
T PRK10504 105 RVLQGVGGAMMVPVGRLTVM------KIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW--HWIFLINIPVGII 176 (471)
T ss_pred HHHHHhhhHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH--HHHHHHHHHHHHH
Confidence 99999999998887666677 999999999999999999999999999999999999899 8888877766655
Q ss_pred HHHHHHHhccccCCCCCccC-------------------CCCc-----------------------------cchhhhhh
Q psy10432 189 STLFIYFCWEEHYDPKTAKS-------------------SLLP-----------------------------NSMFSSLK 220 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~~~~-------------------~~~~-----------------------------~~~~~~~~ 220 (440)
..+......|+.+.++++.+ +.+. ++...+ .
T Consensus 177 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 255 (471)
T PRK10504 177 GAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-L 255 (471)
T ss_pred HHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-H
Confidence 55555555555432211100 0000 000001 2
Q ss_pred hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q psy10432 221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLT 295 (440)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~ 295 (440)
+++|||.++......++........ ..+.|++ +. .+ ...++......++.+++.++.+++.|| +++|+.+..+
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~ 333 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGML-PFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVAT 333 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHH
Confidence 4678888887766666655554333 3345554 32 22 567778888888888888999999998 9999998877
Q ss_pred HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432 296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL 375 (440)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 375 (440)
..+..+....+ ....... +.. .......+.+++.+...+..+....+.+|++.+++++|+.++..++|..+++
T Consensus 334 ~~~~~~~~~~~-~~~~~~~--~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 406 (471)
T PRK10504 334 TLGLALVSLLF-MLVALLG--WYY----LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGV 406 (471)
T ss_pred HHHHHHHHHHH-Hhccccc--cHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHH
Confidence 77666655444 2211111 111 1222333444566777777888888889999999999999999999999998
Q ss_pred HHh
Q psy10432 376 IFI 378 (440)
Q Consensus 376 ~~~ 378 (440)
.+.
T Consensus 407 ~i~ 409 (471)
T PRK10504 407 TIA 409 (471)
T ss_pred HHH
Confidence 743
No 25
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=7.9e-31 Score=245.47 Aligned_cols=366 Identities=14% Similarity=0.060 Sum_probs=255.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK 97 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~ 97 (440)
..+...++..+++++.....+++.+|+|.++.+.+++.....+...+..|+.|+++||+||||+++.+..+.+++ +++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 445556666666766666666777899999999999877777777888889999999999999999999999887 5555
Q ss_pred ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q psy10432 98 FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIA 177 (440)
Q Consensus 98 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 177 (440)
++++. ++.|+++|++.+...|+..+++. |++|+|+|++++++.+...++|.++||.++|++.++. | +.
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~------~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~--~~ 154 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILT------ELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-A--EA 154 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--HH
Confidence 55553 78899999999999998888888 9999999999999999999999999999999999863 5 66
Q ss_pred hHHHHHHHHHHHHHHHHHhccccCCCCCccCCCC---ccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432 178 PFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLL---PNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL- 253 (440)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (440)
.+.+.....++. .+..+.+||+++++++++.+. .++.++.++.++++|.+........+.+..........++..
T Consensus 155 ~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T PRK11195 155 ALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAP 233 (393)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655444333 334456777654322211111 123344566788888877654444333333332222222222
Q ss_pred ---hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHH
Q psy10432 254 ---EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFL 330 (440)
Q Consensus 254 ---~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (440)
+....+.|......+++.+++++..+++.|| .++++.+..+... .+....+ .. .+..+ .......
T Consensus 234 ~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~~-~~~~~~~-~~---~~~~~------~~~~~~~ 301 (393)
T PRK11195 234 VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGILM-GLVVLLM-AL---QHSLL------PAYPLLI 301 (393)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHHH-HHHHHHH-HH---HhHHH------HHHHHHH
Confidence 3334778999999999999999999999997 8877766665432 2222111 11 11111 2333444
Q ss_pred HHHHhhhchhhhHHhHhccCCcchh-hHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432 331 IYEISVGMYCPVTGYLRGRIIPEKA-RATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409 (440)
Q Consensus 331 ~~~~~~g~~~~~~~~~~~~~~p~~~-~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (440)
+.+++.+...+..++..++..|++. +|++.++.+...+++..++..+. +.. + ..+.+..+.+.+...+++..+.
T Consensus 302 ~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~---~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 302 LIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY---SLL-V-KLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH---HHH-H-HcCCCHHHHHHHHHHHHHHHHH
Confidence 5566677777777788888766654 79999999999999999998854 322 3 5566777777666666666655
Q ss_pred HHhhh
Q psy10432 410 CVFKR 414 (440)
Q Consensus 410 ~~~~~ 414 (440)
...+.
T Consensus 377 ~~~~~ 381 (393)
T PRK11195 377 LLWRW 381 (393)
T ss_pred HHHHH
Confidence 55544
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=9e-31 Score=249.04 Aligned_cols=340 Identities=16% Similarity=0.123 Sum_probs=235.1
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
.....+..|.+.+++|.|+.+.++..++..+...+.+++.|+++||+|||+++..+.++.+++ .+.+++++++.++++|
T Consensus 34 ~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 113 (426)
T PRK12307 34 FMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSR 113 (426)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 334566677777999999999998777777777777789999999999999999999999998 6888899999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
+++|++.+...+...+++. |++|+|+|+++.++...+.++|.++++.+.+.+.+..+| |..+++.....++
T Consensus 114 ~l~G~g~g~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w--~~~f~i~~~~~~~- 184 (426)
T PRK12307 114 FIVGMGMAGEYACASTYAV------ESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW--RAAFFVGLLPVLL- 184 (426)
T ss_pred HHHHHHHhhHHHHHHHHHH------HhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH--HHHHHHHHHHHHH-
Confidence 9999999988777777777 999999999999999999999999999999999888899 8787765443332
Q ss_pred HHHHHHhccccCCCCCcc----CC---CCccchhhhhhhhccCcchHHHHHHHH---HHHhHHHHHHHhhhhhhhccC--
Q psy10432 190 TLFIYFCWEEHYDPKTAK----SS---LLPNSMFSSLKFLFTNPCLLTLGIVQS---IYEGIMYTFIFVWTPVLEVLS-- 257 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-- 257 (440)
.+......||+++.++++ ++ ...+.....+++++++|.++....... ......+......+++++..+
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 264 (426)
T PRK12307 185 VIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFD 264 (426)
T ss_pred HHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 222222345543211100 00 000111225667788887765333222 122222223233343443333
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHh-
Q psy10432 258 -PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEIS- 335 (440)
Q Consensus 258 -~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (440)
...+...+...++.++++++.+++.|| +++|+.+..+.....+..+.+... ..... ......+++..
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~ 333 (426)
T PRK12307 265 TGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRI---PQDNY-------LLLGACLFGLMA 333 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHH---ccccH-------HHHHHHHHHHHH
Confidence 456777788889999999999999997 999988877776655544333111 11111 11111111111
Q ss_pred -hhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHH
Q psy10432 336 -VGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSV 394 (440)
Q Consensus 336 -~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 394 (440)
.....+.....+.|.+|++.||++.|+.+...++++.++|.+. +.+.+ ..++...
T Consensus 334 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~---g~l~~-~~g~~~~ 389 (426)
T PRK12307 334 TNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA---TWLGI-TMGLGAA 389 (426)
T ss_pred hcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH---HHHHH-cccHHHH
Confidence 1122345566778999999999999999999999999999954 66767 6665543
No 27
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.2e-30 Score=244.81 Aligned_cols=358 Identities=11% Similarity=0.092 Sum_probs=251.5
Q ss_pred HHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432 23 PFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS 100 (440)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~ 100 (440)
..++...+.....|+++..+ +++|.|+.++|++.........+.+++.|+++||+|||+++..+..+..++ ..+.+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~ 97 (400)
T PRK11646 18 DNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc
Confidence 33444445556677776544 789999999999999888888888899999999999999999999999998 6777889
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 180 (440)
+++.+++.|+++|++.+...|...+++. |++|+|+|++++++.+...++|..+||.+++.+. ..|| +..|+
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~--~~~f~ 168 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVI------KLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDF--RLVCA 168 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhH--HHHHH
Confidence 9999999999999999988787777777 9999999999999999999999999999999998 5588 88888
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hcc---
Q psy10432 181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVL--- 256 (440)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 256 (440)
+.+...++..++..+..||.++++ ..++..++++++++||+++...+............ ..+.|.+ ++.
T Consensus 169 ~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~ 241 (400)
T PRK11646 169 TGAVLFVLAAAFNAWLLPAYKLST------VRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQV-MLMLPIMVNDIAGS 241 (400)
T ss_pred HHHHHHHHHHHHHHHhCCcccccc------cchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHH-HHhhhhhHHhhcCC
Confidence 777665555544445556532211 11223456777888888876554443333222222 2244554 322
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
..+.+..++...++...+....+++.||+.+.++.+..+.....++...+ ... ++ .+ .......+...+.
T Consensus 242 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l-~~~--~~-~~------~~~~~~~l~~~g~ 311 (400)
T PRK11646 242 PSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI-GMV--SN-LQ------QLFTLICLFYIGS 311 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HHh--hh-HH------HHHHHHHHHHHHH
Confidence 25667777777776666666667766643555665666555555544333 211 11 11 1222333445556
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc--ch-hhHHHHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL--IA-IHSVFVVCTACLLVALLAS 409 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~ 409 (440)
+...|...++..+..|+++||+++|+.+...++|..++|.+. |.+.|.. .+ ....+...+.+.+++.+..
T Consensus 312 ~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~---G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 312 IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGG---GWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccch---HHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 677788889999999999999999999999999999999843 6666521 12 3456665555555554443
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=9.2e-31 Score=252.39 Aligned_cols=333 Identities=11% Similarity=0.038 Sum_probs=249.0
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
..++....+|++.+|+|.+.++.+|+.+...+......++.|+++||+|||++++.+..+..++ .++++++|++.++++
T Consensus 21 d~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~ 100 (495)
T PRK14995 21 DATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIAT 100 (495)
T ss_pred HHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4677888899999999999999998665555554555579999999999999999999999998 789999999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
|+++|++.+...|...+.+. +.+ |+++|++++++......+|..+||.+++++.+++|| |+.|++...+.+
T Consensus 101 r~l~G~g~~~~~~~~~~~l~------~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw--r~~f~i~~~~~~ 172 (495)
T PRK14995 101 RALLAIGAAMIVPATLAGIR------ATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW--GSVFLINVPIVL 172 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHHHHHHH
Confidence 99999999998776555555 655 778999999999999999999999999999999999 888888877777
Q ss_pred HHHHHHHHhccccCCCCCccCCCCc-------------------cch---------------------------hhh--h
Q psy10432 188 GSTLFIYFCWEEHYDPKTAKSSLLP-------------------NSM---------------------------FSS--L 219 (440)
Q Consensus 188 ~~~~~~~~~~~e~~~~~~~~~~~~~-------------------~~~---------------------------~~~--~ 219 (440)
+..++..+.+||++++++++.+... +.. +++ .
T Consensus 173 ~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~ 252 (495)
T PRK14995 173 VVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID 252 (495)
T ss_pred HHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC
Confidence 6666666677776543222111000 000 000 0
Q ss_pred hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh----ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q psy10432 220 KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE----VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLT 295 (440)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~ 295 (440)
.+++|||.+....+..++.....+......+.+++ ....+.|+......++..+++++.|++.|| +++|+.+..+
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g 331 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGG 331 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHH
Confidence 24677787777666665555555544443343432 223788999999999999999999999998 9998887777
Q ss_pred HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432 296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL 375 (440)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 375 (440)
..+..++...+ .........+ .......+.+++.|...+.......+.+|+++++.+.++.++..++|..+|+
T Consensus 332 ~~~~~~~~~~l-~~~~~~~~~~------~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ 404 (495)
T PRK14995 332 MALSALSFYGL-AMTDFSTQQW------QAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGI 404 (495)
T ss_pred HHHHHHHHHHH-HHhcCCCchH------HHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHH
Confidence 77666655444 2221111112 2233445666677877777778888888999999999999999999999888
Q ss_pred HHh
Q psy10432 376 IFI 378 (440)
Q Consensus 376 ~~~ 378 (440)
.+.
T Consensus 405 ai~ 407 (495)
T PRK14995 405 AIF 407 (495)
T ss_pred HHH
Confidence 643
No 29
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.4e-31 Score=248.11 Aligned_cols=337 Identities=23% Similarity=0.318 Sum_probs=250.7
Q ss_pred HHHHHHHHHHHhhhhhHh-hhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc
Q psy10432 22 IPFFLATFSDWIQGPYVY-KVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS 99 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~ 99 (440)
+..+..........+..+ .+.+++|.|+++++++.++......+.+++.|+++||+|||+++..+.++.+++ .+..++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 344555666777888887 677999999999999888888888888899999999999999999999999998 555566
Q ss_pred chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhH
Q psy10432 100 SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPF 179 (440)
Q Consensus 100 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 179 (440)
+|.+.+++.|++.|++.+...+...+++. |++|+|+|++++++.+...++|.++||.+++.+.+..+| +..+
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~--~~~~ 154 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIA------DWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGW--RWAF 154 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH--CCHH
T ss_pred hhHHHHhhhcccccccccccccccccccc------ccchhhhhhhccccccchhhhhhhcccchhhhhhhcccc--cccc
Confidence 88889999999999999999888777777 999999999999999999999999999999999988899 8788
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCccCCCC-----ccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432 180 AVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLL-----PNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL- 253 (440)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (440)
++.+...++..++.....++++++++++++.+ +++..+.++.++++|.+|................. .+.|.+
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 233 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS-FFLPLYL 233 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHC
T ss_pred ccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhh-cccchhh
Confidence 88887777666544445555444333222111 11222236777888877633333333333333333 344443
Q ss_pred ----hcc-CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432 254 ----EVL-SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 254 ----~~~-~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
+.. ..+.+.......+..++++++.+++.|| +++++..........+....+.......+ .. .....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~ 305 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALGLLLLPFSSS-PV------WLIIA 305 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCCSHHHCH-HH------HHHHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHHHhhh-HH------HHHHH
Confidence 222 1456677888888999999999999997 99888877777766666655522211111 11 23445
Q ss_pred HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432 329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL 375 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 375 (440)
..+.+++.+...+......++..|++++|++.|+.+...+++..++|
T Consensus 306 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 306 LFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55667778888999999999999999999999999999999999987
No 30
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.9e-30 Score=245.18 Aligned_cols=358 Identities=16% Similarity=0.111 Sum_probs=230.8
Q ss_pred HhhhhhHhhhHhhcC---CChhh---HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH-
Q psy10432 32 WIQGPYVYKVYKDYG---YDEKN---IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY- 103 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g---~s~~~---~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~- 103 (440)
.......|.+.++++ .+..+ ++..+..++....+.++++|+++||+||||++..+..+++++ .++++++++.
T Consensus 39 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 118 (432)
T PRK10406 39 YVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYET 118 (432)
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchh
Confidence 334445555667774 44443 344677777766666779999999999999999999999998 7888888764
Q ss_pred -------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q psy10432 104 -------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD------- 169 (440)
Q Consensus 104 -------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------- 169 (440)
.+++.|+++|++.|...|...+++. |++|+++|++..+..+.+...|.++++.+...+..
T Consensus 119 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~------e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 192 (432)
T PRK10406 119 IGTWAPALLLLARLFQGLSVGGEYGTSATYMS------EVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAEL 192 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHH------HhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 5889999999999999888777777 99999999999999998888888888877665542
Q ss_pred -hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHH-HhHHHHHHH
Q psy10432 170 -ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIY-EGIMYTFIF 247 (440)
Q Consensus 170 -~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 247 (440)
.+|| |.+|++.++..++. +.....+||+++.+++++ + ...++++++++++.+...+...+. ....+.+..
T Consensus 193 ~~~gW--r~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~~--~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
T PRK10406 193 REWGW--RIPFALGAVLAVVA-LWLRRQLDETSQQETRAL--K---EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTT 264 (432)
T ss_pred hccch--HHHHHHHHHHHHHH-HHHHhcCCCCchHHHhhh--c---ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577 99998877665543 333445666654322111 1 122466777888877655544433 444555544
Q ss_pred hhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432 248 VWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN 323 (440)
Q Consensus 248 ~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (440)
..++++ +..+ .+.+...+...+...++.++.|++.|| +++|+.+.....+..+................
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 337 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSALQNVSSPY------ 337 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHcCCcHH------
Confidence 334444 3334 355677777777788888999999998 99988776655443333222211111111111
Q ss_pred HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhH-HHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432 324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFI-TCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL 402 (440)
Q Consensus 324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (440)
..+....+..+..+...+....+.+|.+|++.|+++.|+.+...+.. +...|.+. +.+.. ...+...+...++..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~---~~l~~-~g~~~~~~~~~~~~~ 413 (432)
T PRK10406 338 AAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVA---LSLKS-IGMETAFFWYVTLMA 413 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHH---HHHHH-hCCCcHHHHHHHHHH
Confidence 11111112222334444556778899999999999999998876652 44455522 32222 223455566666666
Q ss_pred HHHHHHHHHhhh
Q psy10432 403 LVALLASCVFKR 414 (440)
Q Consensus 403 ~~~~~~~~~~~~ 414 (440)
+++.+..+..++
T Consensus 414 ~i~~~~~~~l~~ 425 (432)
T PRK10406 414 VVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHhhh
Confidence 666555554433
No 31
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=4.6e-30 Score=240.09 Aligned_cols=348 Identities=10% Similarity=0.038 Sum_probs=245.1
Q ss_pred HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432 25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY 103 (440)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~ 103 (440)
++...+.....+++|.+.+++|.|++++|++.+...+...+.+++.|+++||+|||+.+..+.++.+++ ..+++++|++
T Consensus 16 ~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~ 95 (381)
T PRK03633 16 LLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFW 95 (381)
T ss_pred HHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 344445667889998888999999999999888888777777789999999999999999999999988 6778899999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432 104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI 183 (440)
Q Consensus 104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 183 (440)
.+++.|+++|++.+...|...+.+. +..++++|+++++..+.+.++|..+||.+++.+.+...| ...+....
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~--~~~~~~~~ 167 (381)
T PRK03633 96 SWLAWRFVAGIGCAMIWVVVESALM------CSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMS--VLPWVTGL 167 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc--hHHHHHHH
Confidence 9999999999999988776666666 888999999999999999999999999999998776433 23332222
Q ss_pred HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP 259 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 259 (440)
.... .........+|+ +++++ + .++.++.+++|.++.................. +.|.+ ++.+ ..
T Consensus 168 ~~~~-~~~~~~~~~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lp~~~~~~g~s~~~ 236 (381)
T PRK03633 168 VLAA-ILPLLFTRILNQ--QAENH---D----STSIWPMLKLRQARLGVNGCIISGIVLGSLYG-LMPLYLNHQGMSDAS 236 (381)
T ss_pred HHHH-HHHHHHhcccCC--CCCCC---C----CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHH
Confidence 2111 111112122222 11111 1 12334566777776543332222222222222 34444 4333 45
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY 339 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 339 (440)
.+...+...++.++++...+++.|| +++++.+..+.....++.... . .. . .......+.+++.+..
T Consensus 237 ~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~-~----~~--~------~~~~~~~l~g~~~~~~ 302 (381)
T PRK03633 237 IGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAM-L----SQ--A------AMAPALFILGAAGFTL 302 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHH-h----hh--H------HHHHHHHHHHHHHHhH
Confidence 6778888889999999999999998 999988877766666554333 1 00 1 1112222333334456
Q ss_pred hhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432 340 CPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409 (440)
Q Consensus 340 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (440)
.|...+.+.|..|+++++...+..+...++|..++|.+. |.+.| ..+++..|.+.+.+.++..+..
T Consensus 303 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~---G~l~~-~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 303 YPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFT---AMLMQ-NYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCccHHHHHHHHHHHHHHHHH
Confidence 788888888888888888888888888999999999944 77878 7788888888877776554433
No 32
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.1e-30 Score=241.31 Aligned_cols=360 Identities=12% Similarity=0.044 Sum_probs=253.6
Q ss_pred HHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHH-HhHHHHHh-hhhcc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICIS-YGIVYTLC-CLTKF 98 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~-~~~~~~~~-~~~~~ 98 (440)
...+...++.++..|.++... +++|.|++++|++.++......+.+|+.|+++||+||||.++. +.....++ .++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 345556666777888886644 7899999999999888888888888999999999999887655 55555555 57788
Q ss_pred cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q psy10432 99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLT--FARATFGSGLFAIVSGFTAHFFADILNLGPI 176 (440)
Q Consensus 99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 176 (440)
+++++.+++.|++.|.+.+...|...++.. |+.|+++|++. .+......++|..+||.+++.+.+.+|| |
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~--~ 155 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAR------EHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGF--T 155 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHH------HHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhccc--H
Confidence 899999999999998888777676555555 88777777654 6788888999999999999999998899 8
Q ss_pred hhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hc
Q psy10432 177 APFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EV 255 (440)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 255 (440)
..|++.+...++..+..++.+||+++++++++ . .++.+..+++|+++......++............+.++ +.
T Consensus 156 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (375)
T TIGR00899 156 VMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL--T----RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHE 229 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCccccc--C----cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 88888877666666666666787654332211 1 12334466777777655544444443333323233333 33
Q ss_pred cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHH
Q psy10432 256 LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIY 332 (440)
Q Consensus 256 ~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (440)
.+ .+.+..........+++.++.+++.|| +++|+.+..+.....+..... ... +..+ .......+.
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~ 298 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGL-AAD---NSLW------ALLMLQLLN 298 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHH-HHH---HHHH------HHHHHHHHH
Confidence 33 556666666667778888999999998 999988776655444333222 111 1111 223333344
Q ss_pred HHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 333 EISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
+++.|...+......+|..|+ +++++.++.+...++|..++|.+. +.+.+ ..+++..|...+++.+++.+....
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~---g~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVG---GILAE-RWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHH---HHHHH-hccchhHHHHHHHHHHHHHHHHhe
Confidence 556676777777788888775 567999999999999999999854 66667 678899999888887777666543
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.1e-30 Score=245.04 Aligned_cols=353 Identities=13% Similarity=0.119 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS 100 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~ 100 (440)
+......+......+..+.+.+++|.|+++++++.++......+.+++.|+++||+|||++++.+.++.+++ .++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T TIGR00891 19 LGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP 98 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc
Confidence 333444444566778888888999999999999888888888888889999999999999999999988888 6788899
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCchhh
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN--LGPIAP 178 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~~~ 178 (440)
+++.+++.|++.|++.+...+...+++. |++|+++|++++++.+.+..+|.++++.+++.+.+..+ | |..
T Consensus 99 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w--~~~ 170 (405)
T TIGR00891 99 GYITMFIARLVIGIGMGGEYGSSAAYVI------ESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW--RAL 170 (405)
T ss_pred cHHHHHHHHHHHHhhhhhhhHHHHHHHH------HhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH--HHH
Confidence 9999999999999999999887777777 99999999999999999999999999999999988876 7 888
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCccCC--CCccchhhh------hhh--------hc-cCcc----hHHHHHHHHH
Q psy10432 179 FAVAIPFLLGSTLFIYFCWEEHYDPKTAKSS--LLPNSMFSS------LKF--------LF-TNPC----LLTLGIVQSI 237 (440)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~~~~~~------~~~--------~~-~~~~----~~~~~~~~~~ 237 (440)
|.+.....++ .++.....||+++.++++++ ...+...+. .+. .. +.++ +........+
T Consensus 171 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
T TIGR00891 171 FFISILPIIF-ALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLF 249 (405)
T ss_pred HHHHHHHHHH-HHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHH
Confidence 8776554443 33344456776432111100 000000000 000 00 0011 1111222222
Q ss_pred HHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432 238 YEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL 313 (440)
Q Consensus 238 ~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (440)
............++++ +..+ .+.+.......++.++++++.+++.|| +++|+.+..+.....+........ .
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~---~ 325 (405)
T TIGR00891 250 ANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFAI---G 325 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHHh---C
Confidence 2222222222233333 2233 567888888999999999999999997 999988777665543332222111 1
Q ss_pred ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hh
Q psy10432 314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IH 392 (440)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 392 (440)
...+ .......+.+++.+...+.....++|..|+++|++++|+.+...+++..++|.+. |.+.| ..| |+
T Consensus 326 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~---g~l~~-~~g~~~ 395 (405)
T TIGR00891 326 ANVA------VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIG---ALLAQ-RLDEYG 395 (405)
T ss_pred CchH------HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHH---HHHHH-hccccc
Confidence 1111 1222323333344455667778889999999999999999999999999999955 77777 556 66
Q ss_pred HHHHH
Q psy10432 393 SVFVV 397 (440)
Q Consensus 393 ~~~~~ 397 (440)
..+..
T Consensus 396 ~~~~~ 400 (405)
T TIGR00891 396 TALAS 400 (405)
T ss_pred hhHHh
Confidence 55544
No 34
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1e-29 Score=237.85 Aligned_cols=329 Identities=14% Similarity=0.141 Sum_probs=239.9
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
..+..|.+|.+.+++|.|+++++++.++......+..++.|+++||+|||+.+..+..+.+++ .++.++++++.+++.|
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 86 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR 86 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 455778998999999999999999877777777777789999999999999999999999888 6778889999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
++.|++.+...+...+++. |++|+|+|++++++.+....+|..++|.+++.+.+..+| +..+.+.....++.
T Consensus 87 ~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~ 158 (377)
T PRK11102 87 FLHGLAAAAASVVINALMR------DMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSW--HAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh--HHHHHHHHHHHHHH
Confidence 9999999998777666776 999999999999999999999999999999999998898 88887777666665
Q ss_pred HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHH
Q psy10432 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFS 265 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~ 265 (440)
.++..+..||+++++++++ .+.++..+++++.+++|+++...+...+.....+.+....++++ +..+ .+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~ 237 (377)
T PRK11102 159 AALVFFFIPETLPKERRQP-FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFA 237 (377)
T ss_pred HHHHHHhCCccCcccccCC-CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHH
Confidence 5555666777654332221 12223345666788889888776666666555555544334444 3333 67888889
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHh
Q psy10432 266 CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGY 345 (440)
Q Consensus 266 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 345 (440)
...++.++++++.+++.|| +++|+.+..+.....+..+.+..........+ .......+.....+...+....
T Consensus 238 ~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 310 (377)
T PRK11102 238 LNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMGIWLVVSALLDLGFW------ALVVGVAAFVGCVSMISSNAMA 310 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH------HHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999998 99999888777655444333312111111111 1222332333334444444555
Q ss_pred HhccCCcchhhHHHHHHhhhhhh-hHHHHHHH
Q psy10432 346 LRGRIIPEKARATITNWLRVPTN-FITCFTLI 376 (440)
Q Consensus 346 ~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~ 376 (440)
...+..| +++|++.++.+.... ++..+++.
T Consensus 311 ~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~ 341 (377)
T PRK11102 311 VILDEFP-HMAGTASSLAGTLRFGIGAIVGAL 341 (377)
T ss_pred HHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 5666655 789999998776543 55666665
No 35
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.1e-29 Score=235.64 Aligned_cols=365 Identities=11% Similarity=0.042 Sum_probs=250.2
Q ss_pred HHHHHHHHhhhhhHhhhHh-hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc---
Q psy10432 25 FLATFSDWIQGPYVYKVYK-DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--- 99 (440)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--- 99 (440)
.+++....+.++..+.+.+ |+|+|++|.+++.++..+.+.+...+.|++.||+|.|+++..+.++.++. ...+++
T Consensus 44 ~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~ 123 (462)
T PRK15034 44 LLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN 123 (462)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3344445566777766665 89999999999888777777777778899999999999999999998887 566655
Q ss_pred --chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----hhcc
Q psy10432 100 --SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA-----DILN 172 (440)
Q Consensus 100 --~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----~~~g 172 (440)
++++.+++.|++.|++ +...+.....+. +++|+++||+++|+.....++|..+++++...+. +.+|
T Consensus 124 ~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs------~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G 196 (462)
T PRK15034 124 PNTPFGIFIVIALLCGFA-GANFASSMGNIS------FFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLG 196 (462)
T ss_pred cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHH------HHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999998 445465555555 9999999999999997777777766655554432 3334
Q ss_pred cC-----------chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhH
Q psy10432 173 LG-----------PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGI 241 (440)
Q Consensus 173 w~-----------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (440)
|+ ++...++-.++.++..++.++..+|.++ ++ .+ .++.+..+|+|+.|.+.+..++.++.
T Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~~-------~~-~~~~~~vlk~~~~Wllslly~~tFG~ 267 (462)
T PRK15034 197 VNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-SR-------AS-IADQLPVLQRLHLWLLSLLYLATFGS 267 (462)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-cc-------cC-HHHHHHHhCCCchhHHHHHHHHHHHH
Confidence 31 1444444444444455555555444322 11 11 33556789999999999988888777
Q ss_pred HHHHHHhhhhhh--hccC-CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchh
Q psy10432 242 MYTFIFVWTPVL--EVLS-PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRR 318 (440)
Q Consensus 242 ~~~~~~~~~~~~--~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (440)
+..+.. +.|.+ +.++ ...........+...+.+++.|+++|| +|+++.+.++.....+.....+...........
T Consensus 268 fvg~s~-~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~ 345 (462)
T PRK15034 268 FIGFSA-GFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIFSALLFLTLPGTGSGNF 345 (462)
T ss_pred HHHHHH-HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 776644 44444 3333 222222334457778889999999998 999999988887776665443222211111111
Q ss_pred hcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcc---------------------hhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432 319 VLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPE---------------------KARATITNWLRVPTNFITCFTLIF 377 (440)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~---------------------~~~g~~~g~~~~~~~~g~~~~~~~ 377 (440)
. .....+....++.|+.+...+-++.+++|+ ++.|.+.|+....+.+|+.+.|..
T Consensus 346 ~----~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~ 421 (462)
T PRK15034 346 I----AFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQA 421 (462)
T ss_pred H----HHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHH
Confidence 1 233333344456677666666666666663 267889999999999999999986
Q ss_pred hhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 378 IKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+ +...+...++...|....+..+++.++.+....
T Consensus 422 ~---g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 422 F---GMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred H---HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6 444443456788899988888888888776654
No 36
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-30 Score=228.73 Aligned_cols=369 Identities=15% Similarity=0.122 Sum_probs=285.4
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS 100 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~ 100 (440)
....++++...+.++..+.+.+|+|+|++|.+++..+..+.+.+...+.|.+.||+|.|++..++.++..+- ...+++.
T Consensus 21 ~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~ 100 (417)
T COG2223 21 LAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAV 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHc
Confidence 344455555666777777777999999999999999999999999999999999999999999999998886 5555554
Q ss_pred ---hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cC
Q psy10432 101 ---DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN---LG 174 (440)
Q Consensus 101 ---~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~ 174 (440)
+++++++.+++.|++.+.+ ... ...+++++|||++|.++|+.. ..++|..+...++..+....+ |
T Consensus 101 ~~~~~~~ll~~gll~G~~GasF-av~------m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w- 171 (417)
T COG2223 101 TYPSTWQLLVIGLLLGLAGASF-AVG------MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW- 171 (417)
T ss_pred cCCchHHHHHHHHHHhccccee-hcc------cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH-
Confidence 4569999999999998886 433 344459999999999999999 999999999999999998888 7
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchh-hhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432 175 PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMF-SSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL 253 (440)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (440)
+....+..+..++..+..++..+|.++.+++.+ +.. .+++.+++|++.|.+.+.++..++++..+....+.++
T Consensus 172 -~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~-----~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~ 245 (417)
T COG2223 172 -RNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK-----PQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYL 245 (417)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc-----ccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666667777777777665432221 112 5778899999999999999888888877766445444
Q ss_pred -hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc-cchhhcchhHHHHH
Q psy10432 254 -EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF-DSRRVLSTNLCFVA 328 (440)
Q Consensus 254 -~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (440)
++++ .++|.......+...+.++++|+++|| +|.+|.+......++++...+........ ..... .....
T Consensus 246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~ 320 (417)
T COG2223 246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFV----VFVAV 320 (417)
T ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHHHHHHHHHccccccccCcchH----HHHHH
Confidence 5555 677788888888899999999999998 99999999888888887766633221111 01111 23444
Q ss_pred HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
+.....+.|..+...+.++..+.| ++.|.+.|+....+++|+..-|..+ +...+...++...|.+...+.+++.+.
T Consensus 321 ~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~---g~~~~~tg~~~~~f~~~~~~~~~a~v~ 396 (417)
T COG2223 321 FLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAF---GVSLDLTGSYTGAFMLLLAFYLVALVL 396 (417)
T ss_pred HHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHH---HHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 455566778877777778877765 5889999999999999999999866 556563335888999998888888877
Q ss_pred HHHhhh
Q psy10432 409 SCVFKR 414 (440)
Q Consensus 409 ~~~~~~ 414 (440)
.+..+.
T Consensus 397 ~~~~y~ 402 (417)
T COG2223 397 TWALYA 402 (417)
T ss_pred HHHHHH
Confidence 766655
No 37
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=7.2e-30 Score=242.74 Aligned_cols=373 Identities=16% Similarity=0.229 Sum_probs=284.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-
Q psy10432 15 RLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC- 93 (440)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~- 93 (440)
+..+..+...+++.+++++.....+-+..+..-|+..++++..+..+...++++++|.++||++|||+++.+.++.++.
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 3445566888889999998888887666777889999999999999999999999999999999999999988777654
Q ss_pred h-h--hcc--cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 94 C-L--TKF--SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 94 ~-~--~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
. + ... ..+.+.+++.-++.|++.+...|+.++.+. |.+|+|+..+++++.+...++..++||.++|.+.
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip------~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIP------ELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 2 2 111 247888999999999999999998888888 9999999999999999999999999999999999
Q ss_pred hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432 169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248 (440)
Q Consensus 169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (440)
..+|- ...|.+.+...++.... ...++++.++++.+++...++.++.++.+.++|.+....+..+++......+..
T Consensus 164 a~~G~--~~~f~inalsfl~~i~~-l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~a- 239 (524)
T PF05977_consen 164 AFFGA--AAAFLINALSFLISILA-LLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWA- 239 (524)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHH-HHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHH-
Confidence 98887 67777776655544333 333343333222222334566788899999988877665555444444333333
Q ss_pred hhhhh--hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432 249 WTPVL--EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN 323 (440)
Q Consensus 249 ~~~~~--~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (440)
..|.+ +.. ....|++.+..++|.++|+++.+++.+| .++++.+..+.+..+++.+.+ .+ ....+
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~l-al---~~~~~------ 308 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLL-AL---SPSFW------ 308 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHH-hc---chHHH------
Confidence 44555 222 2778999999999999999999999997 888888777777666655444 21 11112
Q ss_pred HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432 324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL 403 (440)
Q Consensus 324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (440)
.....+.+.+++........++.+++.+|++.||++++++++....+..+|..+. |.+.+ ..|.+..+.++++..+
T Consensus 309 ~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~---G~la~-~~g~~~al~~a~~~ll 384 (524)
T PF05977_consen 309 LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLW---GFLAD-HFGVRTALLIAGAALL 384 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCHHHHHHHHHHHHH
Confidence 3444555566666667778889999999999999999999999999999999844 77888 8888888888887766
Q ss_pred HHHHHHHHh
Q psy10432 404 VALLASCVF 412 (440)
Q Consensus 404 ~~~~~~~~~ 412 (440)
++.++....
T Consensus 385 l~~~~~~~~ 393 (524)
T PF05977_consen 385 LSALIALRF 393 (524)
T ss_pred HHHHHHHHh
Confidence 666655443
No 38
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=3.1e-29 Score=236.36 Aligned_cols=335 Identities=13% Similarity=0.113 Sum_probs=240.4
Q ss_pred HHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHH
Q psy10432 27 ATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYIL 105 (440)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l 105 (440)
...+..+..|..+++.+++|.|++++++..++......+.++++|+++||+|||+.+..+..+..++ .++.++++++.+
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQL 97 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 3445667778888888999999999999877777777777789999999999999999999888887 677888999999
Q ss_pred HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHH
Q psy10432 106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPF 185 (440)
Q Consensus 106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~ 185 (440)
++.|+++|++.+...+...+.+. |+++++++++..+.......+|..++|.+++.+.+.+|| +..+.+....
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~--~~~~~~~~~~ 169 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQALVI------DRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGW--QAIFATLFAI 169 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHH------HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh--HHHHHHHHHH
Confidence 99999999998877665555555 999999999999999999999999999999999999899 8877777666
Q ss_pred HHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---Cchhh
Q psy10432 186 LLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGL 262 (440)
Q Consensus 186 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~ 262 (440)
.++..+... ..+|+++++++ ++.++++++++++|+++...+...+.....+.+....+.+++..+ .+.++
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~ 242 (401)
T PRK11043 170 TLLLILPTL-RLKPSKKARKQ------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGL 242 (401)
T ss_pred HHHHHHHHH-HcCCCCCcccc------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHH
Confidence 555444433 34544322111 112346677888888776555444444444444443444444444 45677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432 263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV 342 (440)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 342 (440)
.+....++.++++...+++.|| +++++..........++...+............ .......+.+++.+...|.
T Consensus 243 ~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 316 (401)
T PRK11043 243 SYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLV-----PLLIPFCVMAAANGAIYPI 316 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHH-----HHHHHHHHHHHHHHHHHHH
Confidence 7777788889999999999997 988887666555555444333122111111111 2334444556667777887
Q ss_pred HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432 343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 386 (440)
......+..| +++|++.|+.+.....+...++.+. +...+
T Consensus 317 ~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~---g~l~~ 356 (401)
T PRK11043 317 VVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLV---SALIS 356 (401)
T ss_pred HHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHH---HHccC
Confidence 7777666655 5799999999999888888888855 44444
No 39
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=6.8e-30 Score=242.81 Aligned_cols=344 Identities=17% Similarity=0.154 Sum_probs=216.7
Q ss_pred HHHHHHHHHhhhhhHhhhHhhcCCChhhHHHH------HHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh
Q psy10432 24 FFLATFSDWIQGPYVYKVYKDYGYDEKNIALL------YIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT 96 (440)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~------~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~ 96 (440)
.+.........+...|.+.+|++.++.+.+.. +..+++...+.+++.|+++||+||||.++.+..+.+++ .++
T Consensus 24 ~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~ 103 (434)
T PRK15075 24 NFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI 103 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Confidence 33334445567788888889999887765432 12223222344468999999999999999999999998 788
Q ss_pred cccchhH--------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 97 KFSSDFY--------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 97 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
+++++++ .++++|+++|++.+...+...+++. |++|+++|++.+++.+...++|..+++.+++.+.
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~------e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 104 AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLA------EIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH------hhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8998877 4689999999999988776666666 9999999999999999999999888888887763
Q ss_pred --------hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHH-HHHH
Q psy10432 169 --------DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQ-SIYE 239 (440)
Q Consensus 169 --------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 239 (440)
+.+|| |.+|++...... .........||+++..+++ ++.+.++.++...++++.+...... .+..
T Consensus 178 ~~~~~~~~~~~gW--r~~f~~~~~~~~-~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (434)
T PRK15075 178 QWLSPAQMAEWGW--RIPFLIGCLIVP-FIFLIRRSLEETEEFLARK---HRPSMREIFRSLAANWRIVLAGMLMVAMTT 251 (434)
T ss_pred HhCCHHHHhccch--HHHHHHHHHHHH-HHHHHHHhcCCCHHHHHhh---hccccccHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35677 888876543322 2222222334432111111 1111122233444555544432222 2222
Q ss_pred hHHHHHHHhhhhhh-hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc
Q psy10432 240 GIMYTFIFVWTPVL-EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF 314 (440)
Q Consensus 240 ~~~~~~~~~~~~~~-~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (440)
...+.. ..+.|.+ +. .+ .+.++......++.+++.++.|++.|| +++|+.+..+.....+.............
T Consensus 252 ~~~~~~-~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 252 VSFYLI-TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333333 3345554 32 33 456677778888899999999999998 99998776654443322211111111111
Q ss_pred cchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhhccccccCccchh
Q psy10432 315 DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIKNEDAEGGKLIAI 391 (440)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 391 (440)
... .......+.+++.+...+.......|..|++.|+++.|+.+..... ++.++|.+. +.+.| ..++
T Consensus 330 -~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~---g~i~~-~~g~ 397 (434)
T PRK15075 330 -SFA-----RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS---TWLIH-VTGD 397 (434)
T ss_pred -chH-----HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH---HHHHH-hcCC
Confidence 111 1122222333455666666667888999999999999986655554 577788854 55666 4453
No 40
>PRK03699 putative transporter; Provisional
Probab=99.98 E-value=2.2e-29 Score=236.50 Aligned_cols=352 Identities=13% Similarity=0.072 Sum_probs=244.9
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
....++.+|++.+++|+|.++.+++.+.......+..++.|++.||+|||+++..+..+..++ .+..++++++.+++.|
T Consensus 23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 102 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAM 102 (394)
T ss_pred HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHH
Confidence 455777888999999999999998777666666666679999999999999999999988888 6788889999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccCchhhHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-ILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~~~~~~~~~~~~~ 188 (440)
+++|++.+...+...+.+. |.+|+++|+++++..+...++|..++|.+.+.+.+ ..|| |+.|...+...++
T Consensus 103 ~l~G~~~g~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw--~~~f~~~~~~~~~ 174 (394)
T PRK03699 103 FVLGVVSGITMSIGTFLIT------HVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW--YWVYACIGLVYVA 174 (394)
T ss_pred HHHHHhhHhhccchhHHhh------hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH--HHHHHHHHHHHHH
Confidence 9999999988777666666 99999999999999999999999999999888764 5688 8888776665554
Q ss_pred HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC---CchhhH
Q psy10432 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGLV 263 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~~ 263 (440)
..++.++ ++.|+.++++++ +.++ ..+.. .++.++...+..++.....+.+.. |.|.+ +..+ .+.+..
T Consensus 175 ~~~~~~~--~~~p~~~~~~~~-~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~~~~ 246 (394)
T PRK03699 175 IFILTLF--SEFPALGKHAPK-ADKP---VAKEK-WGIGVLFLAIAALLYILAQLTFIS-WVPEYAQKKFGMSLEDAGNL 246 (394)
T ss_pred HHHHHHh--cCCccccccCcc-ccCc---ccccc-CChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCChHHhhHH
Confidence 4333322 221111111110 1111 11111 235555555555555445444444 44444 3334 567888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhH
Q psy10432 264 FSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVT 343 (440)
Q Consensus 264 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 343 (440)
.+...++..+++++.+++.|| +++|+.+.....+..+....+ .. .++ .+ .........+++.+...+..
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~-~~--~~~-~~------~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLF-VN--TDD-PS------HLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHH-HH--cCC-ch------HHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999998 999888776665544433222 11 111 11 12223334445555566666
Q ss_pred HhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 344 GYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 344 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
.+...+..| +.+++..|......++|..++|.+. |.+.+ ..|++..++..+++.+++.+......+
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~---G~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 316 ITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVT---SPIVA-HFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHH---HHHHH-HhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 666666655 4456778888889999999999955 77777 778888888877777776555444443
No 41
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.98 E-value=6.4e-30 Score=246.40 Aligned_cols=362 Identities=15% Similarity=0.130 Sum_probs=224.0
Q ss_pred hhhhhHhhhHhhcCCChhh----HHH--HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHH-
Q psy10432 33 IQGPYVYKVYKDYGYDEKN----IAL--LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYI- 104 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~----~~~--~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~- 104 (440)
+.+...|.+.++++.+.++ ++. .+++.++...+.+++.|+++||+|||+++..+.++++++ +++++++|++.
T Consensus 34 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~ 113 (490)
T PRK10642 34 VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATI 113 (490)
T ss_pred HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3445555556777533221 222 245555556666679999999999999999999999999 78999999875
Q ss_pred -------HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Q psy10432 105 -------LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-------- 169 (440)
Q Consensus 105 -------l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------- 169 (440)
+++.|+++|++.|...+...+++. |++|+++|++..++...+..+|..+|+.+...+..
T Consensus 114 g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~------e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~ 187 (490)
T PRK10642 114 GIWAPILLLLCKMAQGFSVGGEYTGASIFVA------EYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFL 187 (490)
T ss_pred HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHH------HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhc
Confidence 789999999999999887777777 99999999999999998888898888877655532
Q ss_pred hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCc-----c--CCCCccchhhhhhhhcc-CcchHHHHH-HHHHHHh
Q psy10432 170 ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA-----K--SSLLPNSMFSSLKFLFT-NPCLLTLGI-VQSIYEG 240 (440)
Q Consensus 170 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~--~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 240 (440)
.+|| |+.|++.....++ .++....+||+++..+. + ++...++...+++.+++ +++.+.... ..++...
T Consensus 188 ~~gW--R~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (490)
T PRK10642 188 DWGW--RIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNV 264 (490)
T ss_pred CccH--HHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3567 9999887655443 34445567887542110 0 00000011123444443 222222222 2222334
Q ss_pred HHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccc
Q psy10432 241 IMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDS 316 (440)
Q Consensus 241 ~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (440)
..+......++++ +..+ ...++......++.+++.++.|++.|| +|||+.+..+.....+....++.......
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~-- 341 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALFVLAIPAFILINSNV-- 341 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHhCCC--
Confidence 4444444344444 3333 334556666778888999999999998 99999877666543333222212111111
Q ss_pred hhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHH
Q psy10432 317 RRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFV 396 (440)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (440)
.. ....+..+.+++.+...+.......+.+|++.|+++.|........++.++|.+. +.+.+...++...+.
T Consensus 342 ~~-----~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~---g~l~~~~~~~~~~~~ 413 (490)
T PRK10642 342 IG-----LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLA---AWLVESTQNLMMPAY 413 (490)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCchHHHH
Confidence 11 2233333344444555555666777889999999999986666677777888754 444431222344444
Q ss_pred HHHHHHHHHHHHHHHhhh
Q psy10432 397 VCTACLLVALLASCVFKR 414 (440)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~ 414 (440)
...+..+++.+..+..++
T Consensus 414 ~~~~~~~i~~~~~~~~pe 431 (490)
T PRK10642 414 YLMVVAVIGLITGVTMKE 431 (490)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 444444444444444443
No 42
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.98 E-value=1.7e-29 Score=241.96 Aligned_cols=361 Identities=13% Similarity=0.095 Sum_probs=235.9
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
......++.|.+.+++|+|.++.+++.........+..++.|+++||+|||+++..+.++.+++ ++.+++++++.+++.
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~ 130 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAV 130 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3445677888888999999999988655555545555579999999999999999999888888 678889999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----h-----cccCchhhH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD----I-----LNLGPIAPF 179 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----~-----~gw~~~~~~ 179 (440)
|++.|++.+...+ ...++. |++|+++|++++++.....++|..+++.+...+.. . .|| |+.|
T Consensus 131 r~l~G~~~~~~~~-~~~~i~------~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW--r~~f 201 (476)
T PLN00028 131 RFFIGFSLATFVS-CQYWMS------TMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW--RIAF 201 (476)
T ss_pred HHHHHHHHHhhHH-HHHHHH------HhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh--HHHH
Confidence 9999999876532 333444 99999999999999988777787777666654432 1 467 8888
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCc---cC-CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-h
Q psy10432 180 AVAIPFLLGSTLFIYFCWEEHYDPKTA---KS-SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-E 254 (440)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 254 (440)
++.+++.++..++.++..++.++.+.+ ++ +.++++..+.+++.++++++|...+..++.....+.+.+..++++ +
T Consensus 202 ~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 281 (476)
T PLN00028 202 FVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD 281 (476)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 887777665555544443333321100 00 001112234456677888888766665554444444433334444 3
Q ss_pred ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCch----hHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 255 VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPET----MLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 255 ~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
..+ ...+...+...++.++++++.|+++|| +++|+ ..........+..+.........+ .. ....
T Consensus 282 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~--~~-----~~~~ 353 (476)
T PLN00028 282 RFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQTLGGVFCIWLGRANS--LG-----AAIV 353 (476)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHHHHHHHHHHHhcccch--HH-----HHHH
Confidence 333 567788888899999999999999997 76541 222222222222111111111111 11 1222
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
.+.+++++.+...+....+..+. +++.+|++.|+.+...++|..++|.+. + ..+ ..+|+..|.+.+++.+++.+
T Consensus 354 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l~---~-~~~-~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 354 VMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLLF---F-TGS-SYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHHH---H-hcC-CccHhhHHHHHHHHHHHHHH
Confidence 23333333444444455555565 457999999999999999999998854 2 223 45688899998888888877
Q ss_pred HHHHhh
Q psy10432 408 ASCVFK 413 (440)
Q Consensus 408 ~~~~~~ 413 (440)
+.+..+
T Consensus 428 ~~~~~~ 433 (476)
T PLN00028 428 PVAFIH 433 (476)
T ss_pred HHHhee
Confidence 776654
No 43
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.98 E-value=4.9e-30 Score=244.53 Aligned_cols=354 Identities=12% Similarity=0.053 Sum_probs=245.3
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHH-HHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLY-GRLF 111 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~-~r~l 111 (440)
...+.+++.+++|.+.++.+++.+.......+..|+.|+++||+|||++++.+.++..++ ++++++++++.+++ .|++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 117 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI 117 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 455677888999999999999887777777777789999999999999999999888888 67788899988865 5799
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
+|++.+...+...+.+. ++++ ++|+++.++.+.+..+|..++|++++.+.+.+|| |+.|++.+++.++..+
T Consensus 118 ~G~~~~~~~~~~~~~~~------~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw--r~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLG------KYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW--RGSFLILGGLLLHCCV 188 (455)
T ss_pred HHhcchhhhhHHHHHHH------HHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHH
Confidence 99999876554444444 8885 7999999999999999999999999999999899 8888887776654444
Q ss_pred HHHHhccccCCC----CC--c--c-CCCCcc----c---hhhhh--hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432 192 FIYFCWEEHYDP----KT--A--K-SSLLPN----S---MFSSL--KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL 253 (440)
Q Consensus 192 ~~~~~~~e~~~~----~~--~--~-~~~~~~----~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (440)
..++..|+++.+ .+ + + +....+ . ...+. .+++++|.++......++...+.+......+++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 268 (455)
T TIGR00892 189 CGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYA 268 (455)
T ss_pred HHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 333333322110 00 0 0 000000 0 00111 1467888888776666665555544444445554
Q ss_pred hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhc-cCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHH
Q psy10432 254 EVLS---PPLGLVFSCFMISIMIGSKIYSILILKY-FKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAF 329 (440)
Q Consensus 254 ~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (440)
+..+ .+.+...+..+++.++++++.+++.||+ .++++...........+...+ ......+ .+ ......
T Consensus 269 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~-~~------~~~i~~ 340 (455)
T TIGR00892 269 KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL-LCALAGD-YT------GLVIYC 340 (455)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH-HHHHhch-HH------HHHHHH
Confidence 4333 6778888889999999999999999961 223333332222221111111 1111111 11 233444
Q ss_pred HHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccc-hhhHHHHHHHHHHHHHHHH
Q psy10432 330 LIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLI-AIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 330 ~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 408 (440)
.+.+++.+...+...+.+.+.+|++++++..|+.+...++|..++|.+. |.+.+ .. +++..|.+++++.+++.+.
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~---G~l~~-~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA---GRLVD-ATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce---eeeeh-hcCCcchHHHHhhHHHHHHHHH
Confidence 4566677777888888899999999999999999999999999999944 77777 44 5888888888776666553
No 44
>PRK10054 putative transporter; Provisional
Probab=99.98 E-value=9.6e-30 Score=238.31 Aligned_cols=358 Identities=11% Similarity=0.068 Sum_probs=256.8
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc
Q psy10432 20 YFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK 97 (440)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~ 97 (440)
.....+....+.....|+++... +++|.|+.++|++.++......+.+|+.|+++||+|||++++.+.++..++ .+..
T Consensus 12 l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~ 91 (395)
T PRK10054 12 LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIP 91 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Confidence 33444555556667778776655 679999999999888888888888899999999999999999999888888 6778
Q ss_pred ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q psy10432 98 FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIA 177 (440)
Q Consensus 98 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~ 177 (440)
++++++.+++.|.+.|.+.+...+...++.. |..|+++|++++++.....++|..+||.+++.+.+ .+| +.
T Consensus 92 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~--~~ 162 (395)
T PRK10054 92 LVNNVTLVVLFFALINCAYSVFSTVLKAWFA------DNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSI--NL 162 (395)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc--Cc
Confidence 8999999999999998887777777777777 99999999999999999999999999999999876 588 77
Q ss_pred hHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh---h
Q psy10432 178 PFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL---E 254 (440)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 254 (440)
.|...+...++..++..+.+||+++++++++ . + ..+.++.+|||+++...+...+.......+....+.+. +
T Consensus 163 ~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 237 (395)
T PRK10054 163 PFWLAAICSAFPLVFIQIWVQRSEKAIATET---G-S-VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVA 237 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccch---h-h-hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhc
Confidence 8877766665554545555565543322111 1 1 12236778899998877666665554433322222222 2
Q ss_pred ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHH
Q psy10432 255 VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLI 331 (440)
Q Consensus 255 ~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (440)
+.+ ...+..+....+..+......+++.|| .++|+.+..+.....++...+ .... +..+ .......+
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~------~~~~~~~~ 307 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCFVIGLVGF-IFSG--NSLL------LWGMSAAV 307 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHHHHHHHHH-HHcc--hHHH------HHHHHHHH
Confidence 222 345666777767777777888999997 888888877776666655433 2111 1111 12333445
Q ss_pred HHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432 332 YEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL 406 (440)
Q Consensus 332 ~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (440)
.+++.+...|.....+.+..|++.+++.++..+ ...+|..+||.+. |.+.| +.++...|.+.+....++.
T Consensus 308 ~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~---G~l~~-~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 308 FTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVS---GVILT-TLPPWSLFVILALAIVAAW 377 (395)
T ss_pred HHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHH---HHHHH-HcChhhHHHHHHHHHHHHH
Confidence 555666677888888999999999999998655 5668999999944 78888 7788888877655544443
No 45
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=3.6e-29 Score=245.68 Aligned_cols=358 Identities=14% Similarity=0.078 Sum_probs=250.4
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF 111 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 111 (440)
..+..+|.+.+++|++..+.+++.++.++...+.++++|+++||+|||+.++++.++.+++ ++++++++++.++++|++
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l 264 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLL 264 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3666777777999999999988766666666666679999999999999999999988888 678889999999999999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----------CchhhHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL-----------GPIAPFA 180 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw-----------~~~~~~~ 180 (440)
.|++.+...|...+++. |++|+++|++.+++...+..+|.++++.++..+...+|| .||+.++
T Consensus 265 ~G~g~g~~~p~~~~~is------E~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~ 338 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFA------EFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVI 338 (742)
T ss_pred HHHHHHHHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHH
Confidence 99999999887777777 999999999999999999999999999998887765554 2477777
Q ss_pred HHHHHHHHHHHHHHHhccccCCC----CC--------------ccC----CCC----------------------ccc--
Q psy10432 181 VAIPFLLGSTLFIYFCWEEHYDP----KT--------------AKS----SLL----------------------PNS-- 214 (440)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~e~~~~----~~--------------~~~----~~~----------------------~~~-- 214 (440)
+.++..++ .++..+++||+|+- .+ ..+ +.. ..+
T Consensus 339 i~~lp~ll-~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (742)
T TIGR01299 339 VCAFPCVF-AIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWY 417 (742)
T ss_pred HHHHHHHH-HHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchh
Confidence 76665544 34456678998641 00 000 000 000
Q ss_pred -------------hhhhhhhhccCcch---HHHHHHHHHHHhHHHHHHHhhhhhh-hcc---------------------
Q psy10432 215 -------------MFSSLKFLFTNPCL---LTLGIVQSIYEGIMYTFIFVWTPVL-EVL--------------------- 256 (440)
Q Consensus 215 -------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------------- 256 (440)
.+..++.+++.+.. +.+.+..+....+++.... |.|.+ ...
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~-w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (742)
T TIGR01299 418 QRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSV-WFPDMIKHLQADDYAALTKNFPGDKVAHFS 496 (742)
T ss_pred hcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccchhccc
Confidence 00123334443322 2233444444455555533 54432 110
Q ss_pred --------------------------------------------------------------------------------
Q psy10432 257 -------------------------------------------------------------------------------- 256 (440)
Q Consensus 257 -------------------------------------------------------------------------------- 256 (440)
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (742)
T TIGR01299 497 FNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSF 576 (742)
T ss_pred cccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccc
Confidence
Q ss_pred -----C------------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhh
Q psy10432 257 -----S------------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRV 319 (440)
Q Consensus 257 -----~------------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (440)
+ ........+..++.+++.++.+++.|| +|||+.+..+.++.+++.+.+ .+.. + ..
T Consensus 577 ~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~-~~~~--s-~~-- 649 (742)
T TIGR01299 577 LHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFL-SFGN--S-ES-- 649 (742)
T ss_pred cccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHH-HHHc--c-HH--
Confidence 0 001223456668889999999999998 999999988888877776554 2211 1 11
Q ss_pred cchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHH
Q psy10432 320 LSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCT 399 (440)
Q Consensus 320 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (440)
..++..++.+++.+..++....++.|.+|++.|++++|+.+....+|.+++|.+. +.+.+ . +...+|.+++
T Consensus 650 ----~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~---g~L~~-~-~~~~pf~i~a 720 (742)
T TIGR01299 650 ----AMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIF---GSFVG-I-TKAAPILFAS 720 (742)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-h-hhHHHHHHHH
Confidence 1233333445556667788889999999999999999999999999999999854 43433 2 3466777777
Q ss_pred HHHHHHHHHHHHhhh
Q psy10432 400 ACLLVALLASCVFKR 414 (440)
Q Consensus 400 ~~~~~~~~~~~~~~~ 414 (440)
++.+++.++.+.+++
T Consensus 721 ~~lll~~ll~~~LPE 735 (742)
T TIGR01299 721 AALACGGLLALKLPD 735 (742)
T ss_pred HHHHHHHHHHHhCCC
Confidence 777777666665544
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=4.3e-29 Score=234.74 Aligned_cols=271 Identities=14% Similarity=0.112 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS 100 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~ 100 (440)
........+.....+.+|.+.+++|.|+++.++..++......+..|+.|+++||+|||+.++.+.++..++ .++..++
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~ 89 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE 89 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence 333444445556678898899999999999998777766666666689999999999999999999998888 6777889
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 180 (440)
+++.+++.|+++|++.+...+...+++. |.+|+++|+++.++.+....+|..++|.+++.+.+..+| +..+.
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~--~~~~~ 161 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILR------DTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW--QSLFY 161 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh--HHHHH
Confidence 9999999999999999988776666666 999999999999999999999999999999998888888 87777
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC-
Q psy10432 181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS- 257 (440)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 257 (440)
+......+..++.....||++++++++ .++..+..++.++||+++...+...+.......+.. +.|.+ +..+
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~ 236 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPARAPA----ASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVN-TSPVLLMEQMGF 236 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcccCC----ccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHcCC
Confidence 776666655555556677765433211 111233445667788777655544444433333333 33333 3333
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432 258 --PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS 306 (440)
Q Consensus 258 --~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 306 (440)
.+.+.......++.+++.++.+++.|| +++|+.+..+.....++.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~ 286 (392)
T PRK10473 237 SRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITL 286 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH
Confidence 456778888899999999999999997 999998887777666655444
No 47
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=4.3e-29 Score=239.60 Aligned_cols=381 Identities=15% Similarity=0.089 Sum_probs=260.4
Q ss_pred hhHHHHHHHHHHHHHH---HHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-----chhHH
Q psy10432 11 MEFKRLQVRYFIPFFL---ATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-----GRKLI 82 (440)
Q Consensus 11 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~ 82 (440)
|.++..++|......+ ......+..+.+|...++.|.|.++++....++... +..+++|+++||+ ||||.
T Consensus 5 ~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~--~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 5 YLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY--VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCCCchH
Confidence 3444444554444444 333355677778777889999999999864444442 3446999999999 99986
Q ss_pred -HHHHhHHHHHh-hhhccc---chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHH
Q psy10432 83 -CISYGIVYTLC-CLTKFS---SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA 157 (440)
Q Consensus 83 -l~~~~~~~~~~-~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (440)
++.+.+..+++ ...++. ++++.+.+.+++.|++.+...+..+++.. |++|+|||+++.++...+..+|.
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~------~~~~~~~rg~~~~i~~~g~~lG~ 156 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKT------DVLPAEERGAGAAISVLGYRLAM 156 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcChhhhHHHHHHHHHHHHHHH
Confidence 55666666666 444443 47888999999999999998777777777 99999999999999999999999
Q ss_pred HHHHHHHHHHHh-hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHH
Q psy10432 158 IVSGFTAHFFAD-ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQS 236 (440)
Q Consensus 158 ~~g~~~~~~l~~-~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (440)
++++.+++++.+ ..|| |..|++.+...++..+. .+..||++++++++++ ..++..+++++++++++.+...+...
T Consensus 157 llg~~l~~~l~~~~~GW--r~~f~i~a~l~ll~~l~-~~~~~e~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~ll~~~ 232 (491)
T PRK11010 157 LVSGGLALWLADRYLGW--QGMYWLMAALLIPCIIA-TLLAPEPTDTIPVPKT-LEQAVVAPLRDFFGRNNAWLILLLIV 232 (491)
T ss_pred HHHHHHHHHHHhcccCH--HHHHHHHHHHHHHHHHH-HHhcCCCccccccccc-hhhhHHHHHHHHHcCcCHHHHHHHHH
Confidence 999999999998 4688 88888877666554443 3346776432211110 11122345677777787776555554
Q ss_pred HHHhHHHHHHHhhhhhh-hccC---CchhhHHH-HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhh
Q psy10432 237 IYEGIMYTFIFVWTPVL-EVLS---PPLGLVFS-CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTS 311 (440)
Q Consensus 237 ~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~-~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (440)
+............+|++ +..+ .+.+.... ...++.+++.++.|++.|| +++++.+..+..+..+..+.......
T Consensus 233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~ 311 (491)
T PRK11010 233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSI 311 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444433334445554 3334 56777764 5557899999999999998 99888766655544444332211111
Q ss_pred ccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchh
Q psy10432 312 SLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAI 391 (440)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 391 (440)
... ... .......+..++.|...+...+...+..|++.+++.+|+.+...++|..+++.+. |.+.| ..||
T Consensus 312 ~~~-~~~-----~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~---G~l~~-~~G~ 381 (491)
T PRK11010 312 TDK-NLY-----SMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVA---GWFVE-AHGW 381 (491)
T ss_pred ccc-cHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCh
Confidence 111 111 1222333334445666666778888888888999999999999999988887743 77778 7789
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 392 HSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+..|.+.+++.+.+.+.....++
T Consensus 382 ~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 382 PTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998888888777766654
No 48
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=5.9e-29 Score=236.26 Aligned_cols=347 Identities=15% Similarity=0.085 Sum_probs=225.2
Q ss_pred CCChhhHHH-----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH--------HHHHHHHH
Q psy10432 46 GYDEKNIAL-----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY--------ILLYGRLF 111 (440)
Q Consensus 46 g~s~~~~~~-----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~--------~l~~~r~l 111 (440)
+.++. .++ .+.++++...+.+++.|+++||+|||+++..+..+++++ .+++++++++ .+++.|++
T Consensus 56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 134 (438)
T PRK09952 56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAI 134 (438)
T ss_pred CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 56655 344 234566555566678999999999999999999999998 7899999987 58889999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcccCchhhHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD--------ILNLGPIAPFAVAI 183 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------~~gw~~~~~~~~~~ 183 (440)
+|++.+...|...+++. |+.|+++|++..+..+.+..+|.++++.+...+.. .+|| |.+|++..
T Consensus 135 ~G~~~g~~~~~~~~~~~------e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gW--r~~f~~~~ 206 (438)
T PRK09952 135 QGFAVGGEWGGAALLAV------ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGW--RIPFLFSI 206 (438)
T ss_pred HHhhhcccHHHHHHHHH------HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccCh--HHHHHHHH
Confidence 99999999887766666 99999999999999999999999998887776653 3566 98988777
Q ss_pred HHHHHHHHHHHHhccccCCCCCccCC-CCccchhhhhhhhccCcchHHHHHH-HHHHHhHHHHHHHhhhhhh--hccC--
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKTAKSS-LLPNSMFSSLKFLFTNPCLLTLGIV-QSIYEGIMYTFIFVWTPVL--EVLS-- 257 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-- 257 (440)
+..++ .+......||+++..+++.+ ++.++.....+.++++|+.+..... ..+.....+.... +.|.+ +..+
T Consensus 207 ~~~l~-~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~g~s 284 (438)
T PRK09952 207 VLVLI-ALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTA-FALNYSTQNLGLP 284 (438)
T ss_pred HHHHH-HHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCC
Confidence 65543 33334455676532111100 0101111122345667776664432 3333344444433 44444 2333
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 258 -PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 258 -~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
..........++..+++.++.|+++|| +++|+.+..+..+..++...+ ........ ... .......+.+++.
T Consensus 285 ~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~----~~~~~~~l~~~~~ 357 (438)
T PRK09952 285 RELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGTLSAFPF-FMALEAQS-IFW----IVFFSIMLANIAH 357 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHH-HHHHHcCC-hHH----HHHHHHHHHHHHH
Confidence 222233344556677888999999998 999988777765554433222 11111111 111 1223333445556
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhh-hhHHHHHHHHhhccccccCc-cchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPT-NFITCFTLIFIKNEDAEGGK-LIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
+...+..+++..|.+|++.|+++.|+.+... .+++.++|.+. +.+.+. ..++...+...+++.+++.+..+..+
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~---g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIA---AALVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHH---HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 6667778889999999999999999866554 47888899854 555441 22466777777777777666655443
No 49
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=1e-28 Score=232.25 Aligned_cols=328 Identities=12% Similarity=0.103 Sum_probs=235.7
Q ss_pred HHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHH
Q psy10432 28 TFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILL 106 (440)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~ 106 (440)
........|.+|.+.+++|.|+.+.+++.+.......+.+++.|+++||+|||+.+..+..+..++ .++.++++++.++
T Consensus 21 ~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 100 (394)
T PRK11652 21 QMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLI 100 (394)
T ss_pred HHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 334566778888888999999999999877777777777789999999999999999999988888 6777889999999
Q ss_pred HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432 107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL 186 (440)
Q Consensus 107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 186 (440)
+.|++.|++.+...+....... |.+++++++++++..+.+..++..++|.+++.+.+..|| |..|.+.....
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~--~~~f~~~~~~~ 172 (394)
T PRK11652 101 AASAIQGLGTGVGGVMARTLPR------DLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW--RACYLFLLLLG 172 (394)
T ss_pred HHHHHHHhhhhHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh--HHHHHHHHHHH
Confidence 9999999998877555444444 889999999999999999999999999999999998888 88887776655
Q ss_pred HHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc-cC---Cchhh
Q psy10432 187 LGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV-LS---PPLGL 262 (440)
Q Consensus 187 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~g~ 262 (440)
++..+...+..||++++++++ ++.++.+++.++||+++...+...........+....++++++ .+ .+.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 247 (394)
T PRK11652 173 AGVTFSMARWMPETRPADARR-----TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSI 247 (394)
T ss_pred HHHHHHHHHhCCccCccccch-----hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHH
Confidence 544454555667765432221 2245677788888988765554444444443333333334432 33 55677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhh-ccccchhhcchhHHHHHHHHHHHhhhchhh
Q psy10432 263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTS-SLFDSRRVLSTNLCFVAFLIYEISVGMYCP 341 (440)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 341 (440)
......++.++++.+.+++.|| .++ .............+.+..... .....+ .......+.+++.+...|
T Consensus 248 ~~~~~~~~~~~g~~~~~~l~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~ 318 (394)
T PRK11652 248 LFILPIPAAFFGAWFAGRPNKR-FST--LMWQSVICCLLAGLLMWIPGWFGVMNVW------TLLVPAALFFFGAGMLFP 318 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHhccccHH------HHHHHHHHHHHHHHHHHH
Confidence 7777888888999999999997 662 222232222222222211110 111111 234444556667777888
Q ss_pred hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
...+...+..| +++|+..++.+...++|..+++.+.
T Consensus 319 ~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 319 LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888876 6789999999999999999999844
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1.5e-29 Score=244.85 Aligned_cols=339 Identities=13% Similarity=0.098 Sum_probs=252.6
Q ss_pred HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432 25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY 103 (440)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~ 103 (440)
+.......+..+.+|.+.+++|.+.++.+++.+...+...+..|+.|+++||+|||+.++.+..+..++ .++++++|++
T Consensus 12 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 91 (485)
T TIGR00711 12 FMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLE 91 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHH
Confidence 334444667788898888999999999999777777777777789999999999999999999999998 7888999999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432 104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI 183 (440)
Q Consensus 104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 183 (440)
.+++.|+++|++.+...+...+++. |++|+++|++++++......+|..+||.+++++.++.+| |+.|++..
T Consensus 92 ~l~~~~~~~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w--~~~f~~~~ 163 (485)
T TIGR00711 92 LMIIFRVIQGFGGGPLIPLSFSTLL------NIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW--RWIFLINV 163 (485)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc--eehhhhhh
Confidence 9999999999999998887777777 999999999999999999999999999999999999899 77777766
Q ss_pred HHHHHHHHHHHHhccccCCCCCccCC--------------------CCccch---------------------------h
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKTAKSS--------------------LLPNSM---------------------------F 216 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~~~~~--------------------~~~~~~---------------------------~ 216 (440)
...++..++..+..||++++++++.+ .+..+. +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (485)
T TIGR00711 164 PIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDD 243 (485)
T ss_pred HHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66555555555566665432211100 000000 0
Q ss_pred hh--hhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCch
Q psy10432 217 SS--LKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPET 290 (440)
Q Consensus 217 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 290 (440)
++ ..+++++|.++...+..++.....+......+.++ +..+ .+.++......++.++++++.|++.|| +++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~ 322 (485)
T TIGR00711 244 NPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRK 322 (485)
T ss_pred CCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHH
Confidence 00 12456778887776666666666555544334343 2223 678888889999999999999999997 99998
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhH
Q psy10432 291 MLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFI 370 (440)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 370 (440)
.+..+..+..++...+ .....+..... .......+.+++.+...+.......+..|+++++++.|+.+...++|
T Consensus 323 ~~~~g~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 396 (485)
T TIGR00711 323 LVTIGLILYAVGFYWR-AFTFTPDTPFL-----AIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLG 396 (485)
T ss_pred HHHHHHHHHHHHHHHH-hccCCCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHH
Confidence 8887777766665544 21112221221 13334445666677766666666667789999999999999999999
Q ss_pred HHHHHHHh
Q psy10432 371 TCFTLIFI 378 (440)
Q Consensus 371 ~~~~~~~~ 378 (440)
+.+++.+.
T Consensus 397 ~~ig~~i~ 404 (485)
T TIGR00711 397 GSIGTALI 404 (485)
T ss_pred HHHHHHHH
Confidence 99999855
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=1.4e-28 Score=232.72 Aligned_cols=351 Identities=14% Similarity=0.090 Sum_probs=243.6
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchhHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDFYIL 105 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~~~l 105 (440)
.+....+..|.+.+++|.|+++.++..+.......+.+++.|+++||+|||+++..+..+++++ .++ .++++++.+
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~l 120 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF 120 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 3666778888888999999999998666655555555679999999999999999999999998 443 568999999
Q ss_pred HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------------
Q psy10432 106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD---------------- 169 (440)
Q Consensus 106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------------- 169 (440)
+++|+++|+|.+...+..++++. |..++++|.+.++..+....+|..+||.+++.+..
T Consensus 121 l~~r~l~G~g~g~~~~~~~~~v~------~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~ 194 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANPFVT------VLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTP 194 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHH------HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccCh
Confidence 99999999999999887777766 88777777778999999999999999999876541
Q ss_pred --hccc------CchhhHHHHH-HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHh
Q psy10432 170 --ILNL------GPIAPFAVAI-PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEG 240 (440)
Q Consensus 170 --~~gw------~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (440)
..+| +||.+|+... +..++..+......||.+++++++ .+..+..+..++++++|.++...+..++...
T Consensus 195 ~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 272 (438)
T PRK10133 195 EQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSD--AKQGSFSASLSRLARIRHWRWAVLAQFCYVG 272 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc--ccccchhhhHHHHHhCchHHHHHHHHHHHHH
Confidence 0123 1255665433 222222222233445432211111 1122233456778899998876666555555
Q ss_pred HHHHHHHhhhhhh-h-ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcccc
Q psy10432 241 IMYTFIFVWTPVL-E-VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFD 315 (440)
Q Consensus 241 ~~~~~~~~~~~~~-~-~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (440)
..+......++++ + ..+ .+.+..+....++.++++++.+++.|| +++++.+..+..+.....+.. .+. +.
T Consensus 273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~-~~~--~~- 347 (438)
T PRK10133 273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALCLIS-AFA--GG- 347 (438)
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHH-HHc--CC-
Confidence 5554444334343 2 233 667889999999999999999999998 999998887766665544333 211 11
Q ss_pred chhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hhHH
Q psy10432 316 SRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IHSV 394 (440)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 394 (440)
. . ....+.+.+++.+..+|..++...+..|+ +.+++.++..+ ...++.++|.+. |.+.| ..| .+..
T Consensus 348 -~-~-----~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~---G~l~~-~~g~~~~~ 414 (438)
T PRK10133 348 -H-V-----GLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVM---GFVSD-AAGNIPTA 414 (438)
T ss_pred -h-H-----HHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHH---HHHHH-hccchHHH
Confidence 1 1 23445567778999999999999998665 46677777754 446778888755 66667 565 6777
Q ss_pred HHHHHHHHHHHH
Q psy10432 395 FVVCTACLLVAL 406 (440)
Q Consensus 395 ~~~~~~~~~~~~ 406 (440)
|++...+.+...
T Consensus 415 ~~v~~~~~~~~~ 426 (438)
T PRK10133 415 ELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHHHH
Confidence 776555444433
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=3.4e-30 Score=241.30 Aligned_cols=350 Identities=10% Similarity=0.023 Sum_probs=244.0
Q ss_pred HHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHH
Q psy10432 27 ATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYIL 105 (440)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l 105 (440)
............|.+.+++|.|+++.+++.++......+..++.|+++||+|||+.++.+.++.+++ ++..++++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (379)
T TIGR00881 7 YYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVM 86 (379)
T ss_pred HHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3334445667777788999999999999888888887777889999999999999999999999998 788889999999
Q ss_pred HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCchhhHHHHHH
Q psy10432 106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSG-FTAHFFADILNLGPIAPFAVAIP 184 (440)
Q Consensus 106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~gw~~~~~~~~~~~ 184 (440)
++.|++.|++.+...+...+++. |++|+++|++++++.+....+|..++| .+++.+.+..+| +..+++.+.
T Consensus 87 ~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 158 (379)
T TIGR00881 87 AALWALNGIFQGMGWPPCGRTVT------KWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW--HWVFIVPGI 158 (379)
T ss_pred HHHHHHHHhhccccCCchHHHHH------HhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCc--hhHHHHHHH
Confidence 99999999999999887777777 999999999999999999999999999 577777777788 777777766
Q ss_pred HHHHHHHHHHHhccccCCCCCcc-------CC---------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432 185 FLLGSTLFIYFCWEEHYDPKTAK-------SS---------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248 (440)
Q Consensus 185 ~~~~~~~~~~~~~~e~~~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (440)
+.++..++..+..||++++++.+ ++ ++.+......+.++++|.++...+...+...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDW 238 (379)
T ss_pred HHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555666654321100 00 000111223456778888888777766666665555443
Q ss_pred hhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhH
Q psy10432 249 WTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNL 324 (440)
Q Consensus 249 ~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (440)
.++++ +..+ .+.+.......++.+++.++.+++.|| ..+++...............+......+..... .
T Consensus 239 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 312 (379)
T TIGR00881 239 SPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDK-LFNGRRGPLAVFFMALIIVSLLVYWLNPAANPL-----M 312 (379)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHH-HcCCcchHHHHHHHHHHHHHHHHHhcCcchhHH-----H
Confidence 44444 3323 567888888999999999999999997 544333222222222211111111111111111 1
Q ss_pred HHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHH
Q psy10432 325 CFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSV 394 (440)
Q Consensus 325 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 394 (440)
........++..+...+.......|..|++.|+++.|+.+...+++..++|.+. |.+.| ..|++..
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~ 378 (379)
T TIGR00881 313 DLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL---GYLAD-GFGWAGA 378 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH---HHHHH-hhccccc
Confidence 222222233223333445567788899999999999999999999999999854 66777 6666543
No 53
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=1.3e-28 Score=231.12 Aligned_cols=362 Identities=10% Similarity=0.079 Sum_probs=236.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHH-HHhHHHHHh-hh
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICI-SYGIVYTLC-CL 95 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~-~~ 95 (440)
..++..++...+.++..|.++... +++|.|++++|++.+.....+.+.+++.|.++||+||||.++ .+.+..+++ .+
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~ 98 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTL 98 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 344555666666677788886644 789999999999877666666666656555599999998754 555555565 56
Q ss_pred hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 96 TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL--NLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 96 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
.+++++++.+++.+.+.|...+...|...++.. |+.++++| +...+..+.+.++|.++||++++.+.+++||
T Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw 172 (393)
T PRK15011 99 FAWNRNYFVLLFVGVFLSSFGSTANPQMFALAR------EHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSF 172 (393)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH------HHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCh
Confidence 778889988876655555444555565555555 77766655 3445788999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCc-chHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432 174 GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNP-CLLTLGIVQSIYEGIMYTFIFVWTPV 252 (440)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (440)
|..|+..+...++..++.+..+||.+++++++++ + .+. ..+++ ..+...............+.. +.|.
T Consensus 173 --~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~ 241 (393)
T PRK15011 173 --TVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG-T----LEA---PRRNRRDTLLLFVICTLMWGTNSLYII-NMPL 241 (393)
T ss_pred --HHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc-c----ccc---cccccccHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 8888888776666666666667876543222110 1 111 11232 233333333333333333323 4444
Q ss_pred h--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 253 L--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 253 ~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
+ +..+ .+.+.......+..+++.++.|++.|| +++|+.+..+.....+..... .. .+..+ ..+.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~---~~~~~------~~l~ 310 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGM-LM---AHSPA------ILLG 310 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHH-HH---HhhHH------HHHH
Confidence 3 3333 456777777777788899999999998 999987766554444332222 11 11111 1222
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
...+..++.|...+......+|..|+ ++|++.++.+...++|..++|.+. |.+.| ..+++..|.+.+++.+++.+
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~---G~i~~-~~g~~~~~~~~~~~~~~~~~ 385 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLA---GIVAE-IWNYHAVFWFALVMIIATLF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHH---HHHHH-HhhhHHHHHHHHHHHHHHHH
Confidence 22233334555555555667787774 599999999999999999999844 77777 77899999888877777766
Q ss_pred HHHHhh
Q psy10432 408 ASCVFK 413 (440)
Q Consensus 408 ~~~~~~ 413 (440)
..+..+
T Consensus 386 ~~~~~~ 391 (393)
T PRK15011 386 CLLRIK 391 (393)
T ss_pred HHHhhc
Confidence 655443
No 54
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=7.9e-29 Score=231.62 Aligned_cols=356 Identities=11% Similarity=0.027 Sum_probs=257.9
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhH-HHHHh--hhhcc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGI-VYTLC--CLTKF 98 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~-~~~~~--~~~~~ 98 (440)
..++....+..+..|++|.+.+|+|.|.+++|++.++......+.+|++|+++||+|||+....... ...+. ..+..
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAG 90 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445555566778999988889999999999999888888888888999999999998554322211 11122 23446
Q ss_pred cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhh
Q psy10432 99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAP 178 (440)
Q Consensus 99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~ 178 (440)
+++++.+++.|+++|.+.+...|..++... ++ +++|++.+|......++|.++||++++.+.+++|| |..
T Consensus 91 ~~~~~~l~~~~~l~~~~~~~~~p~~~al~~------~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~--~~~ 160 (382)
T TIGR00902 91 AHNAWLLFIAIGLFALFFSAGMPIGDALAN------TW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDE--QNI 160 (382)
T ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHHHH------HH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcCh--hHH
Confidence 789999999999999998887776666543 43 57889999999999999999999999999999999 666
Q ss_pred HHHHHHHHHHHHHHHHHhcccc-CCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC
Q psy10432 179 FAVAIPFLLGSTLFIYFCWEEH-YDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS 257 (440)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (440)
|.+......+ .+... ..+|+ ++++++++ +.++..+..++++|||+++...+..++.......+....++++++.+
T Consensus 161 f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g 236 (382)
T TIGR00902 161 LAILTAGLAF-MLIGF-LIKPTIPPKDAIPE--DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAG 236 (382)
T ss_pred HHHHHHHHHH-HHHHH-HcCCCCCCCccccc--cccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 6665444322 22222 33333 22211111 11112335678889999999888888777777776665555554444
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHH
Q psy10432 258 ---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEI 334 (440)
Q Consensus 258 ---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (440)
...|..+....++.+++..+.+++.|| +++++.+..+.....+..... .. .+..+ ..+....+.++
T Consensus 237 ~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~-~~---~~~~~------~~~~~q~l~g~ 305 (382)
T TIGR00902 237 ISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAII-GA---IEAFP------LIFLLQILHCG 305 (382)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHH-Hh---HhhHH------HHHHHHHHHHH
Confidence 678888888889999999999999998 999999888888777766544 21 11111 23444556677
Q ss_pred hhhchhhhHHhHhccCCcchhhHHHHHHhhh-hhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 335 SVGMYCPVTGYLRGRIIPEKARATITNWLRV-PTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 335 ~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
..+...+....++++. |++++++..++++. ...+|..++|. .+ |.+.| ..+. ..|...+++.+++.++
T Consensus 306 ~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~--~~-G~l~~-~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 306 TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA--FA-GFIYP-TLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hccH-HHHHHHHHHHHHHHHH
Confidence 7888888888888888 99999999999874 56788889998 45 88888 6775 6677777766655433
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=1.2e-28 Score=234.48 Aligned_cols=355 Identities=10% Similarity=0.063 Sum_probs=237.3
Q ss_pred hhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chhHHHHHHHHHHHH
Q psy10432 40 KVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDFYILLYGRLFGGI 114 (440)
Q Consensus 40 ~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~~~l~~~r~l~G~ 114 (440)
+..+++|.|+++.++..++......+..++.|+++||+|||+.+..+.++.+++ .+.... ++++.+.+.|++.|+
T Consensus 51 p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 130 (438)
T TIGR00712 51 PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW 130 (438)
T ss_pred HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Confidence 334457999999999888888877777789999999999999999998888887 444443 567788899999999
Q ss_pred HHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccCchhhHHHHHHHHHHHHHHH
Q psy10432 115 ATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA-DILNLGPIAPFAVAIPFLLGSTLFI 193 (440)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~~~~~~~~~~~~~~~~~~ 193 (440)
+.+...+.....+. |++|+++|++++++.+...++|..++|.+.+... +..+| |..|++.+...++..+..
T Consensus 131 ~~g~~~~~~~~~i~------~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w--~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 131 FQGMGWPPCGRTMV------HWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW--HAALYFPAICAIIVALFA 202 (438)
T ss_pred HhhcchHHHHHHHH------HhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHH
Confidence 99988776666666 9999999999999999999999999988776544 45688 888888777766655555
Q ss_pred HHhccccCCCCC----c--cC-------CCCcc--chhhh-hhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh-cc
Q psy10432 194 YFCWEEHYDPKT----A--KS-------SLLPN--SMFSS-LKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE-VL 256 (440)
Q Consensus 194 ~~~~~e~~~~~~----~--~~-------~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 256 (440)
++.+||++++.+ + ++ ++.++ +.++. .+.+++|+.++...+...+.+...+......+++++ ..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 282 (438)
T TIGR00712 203 FAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVK 282 (438)
T ss_pred HHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHcc
Confidence 666676543210 0 00 00000 11111 124678888888777766666665655554444443 23
Q ss_pred C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432 257 S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE 333 (440)
Q Consensus 257 ~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (440)
+ .+.++......++.++++++.|++.|| +++++....+.............+...+..... .........+
T Consensus 283 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g 356 (438)
T TIGR00712 283 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPL-----VDMICMIVIG 356 (438)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHHHHHHHHHHhcCCCchH-----HHHHHHHHHH
Confidence 3 557788888889999999999999998 865443333332222221111111111111111 1111111111
Q ss_pred Hhhhchhh--hHHhHhccCCcchhhHHHHHHhhhhhhhHH-HHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 334 ISVGMYCP--VTGYLRGRIIPEKARATITNWLRVPTNFIT-CFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 334 ~~~g~~~~--~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
.+...+ .......|..|++.||++.|+.+...+.++ .++|.+. |.+.| ..+++..+.++.+..+++.+..+
T Consensus 357 --~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~---G~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 357 --FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV---GYTVD-FFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred --HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH---HHHHH-hccchHHHHHHHHHHHHHHHHHH
Confidence 222222 223456788899999999999999888875 6788844 77777 77889999888777777666655
Q ss_pred Hhhh
Q psy10432 411 VFKR 414 (440)
Q Consensus 411 ~~~~ 414 (440)
...+
T Consensus 431 ~~~~ 434 (438)
T TIGR00712 431 VVMI 434 (438)
T ss_pred HHHh
Confidence 5444
No 56
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=9.5e-29 Score=239.80 Aligned_cols=350 Identities=13% Similarity=0.117 Sum_probs=232.2
Q ss_pred HHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHH
Q psy10432 28 TFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILL 106 (440)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~ 106 (440)
.+......+..|.+.+++|.|+.+.++..+.......+..++.|+++||+|||+.++.+.++.+++ .+..+++|++.++
T Consensus 33 ~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~ 112 (496)
T PRK03893 33 GFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLF 112 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 334556677788888999999999998777777666666689999999999999999999998888 6788889999999
Q ss_pred HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432 107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL 186 (440)
Q Consensus 107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 186 (440)
+.|++.|++.+...+...+++. |.+|+++|++++++...+.++|..++|.+++.+.+..+| |+.|.+.....
T Consensus 113 ~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w--~~~f~~~~~~~ 184 (496)
T PRK03893 113 IARLVIGMGMAGEYGSSATYVI------ESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW--RALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH--HHHHHHHHHHH
Confidence 9999999999988777777777 999999999999999999999999999999999998899 77776654433
Q ss_pred HHHHHHHHHhccccCCCCCccCC-CCccchhhhhhhhcc-Ccch------------------------HH----------
Q psy10432 187 LGSTLFIYFCWEEHYDPKTAKSS-LLPNSMFSSLKFLFT-NPCL------------------------LT---------- 230 (440)
Q Consensus 187 ~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~------------------------~~---------- 230 (440)
.+ .++.....||+++.++++++ ...++..+ ...+ +++. +.
T Consensus 185 ~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (496)
T PRK03893 185 IF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVD---ILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAA 260 (496)
T ss_pred HH-HHHHHHhCCCchhhhhhccccccchhHHH---HHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Confidence 32 23333445664321111100 01011000 0000 0000 00
Q ss_pred -------------------HHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccC
Q psy10432 231 -------------------LGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFK 287 (440)
Q Consensus 231 -------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~ 287 (440)
............+......++++ +..+ .+.+...+...++.++++++.|++.|| ++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g 339 (496)
T PRK03893 261 IFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LG 339 (496)
T ss_pred HHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 00000000000000112223333 2333 677888999999999999999999997 99
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhh
Q psy10432 288 PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367 (440)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 367 (440)
+++.+..+..+..+..+.+ .... .... . .......+.+.......+....++++..|+++||+++|+.+...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 411 (496)
T PRK03893 340 TRKAYVCSLLISQLLIIPV-FAIG--GANV-W----VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVG 411 (496)
T ss_pred chHHHHHHHHHHHHHHHHH-hhcc--ccHH-H----HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhh
Confidence 9988776665554443322 1111 1111 1 11111111111122234556677889999999999999999999
Q ss_pred hhHHHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432 368 NFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL 402 (440)
Q Consensus 368 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (440)
++|..++|.+. |.+.| ..+++..+...+...
T Consensus 412 ~~g~~lgp~l~---g~l~~-~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 412 ALGGALAPILG---ALIAQ-RLDLGTALASLSFSL 442 (496)
T ss_pred hHHHHHHHHHH---HHHhc-cCChHHHHHHHHHHH
Confidence 99999999844 77778 778877775554433
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=1.3e-28 Score=237.85 Aligned_cols=362 Identities=13% Similarity=0.074 Sum_probs=231.1
Q ss_pred hhhhhHhhhHhhc--------CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----
Q psy10432 33 IQGPYVYKVYKDY--------GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS---- 99 (440)
Q Consensus 33 ~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~---- 99 (440)
..++..+.+.+++ +.++++.+++.+...+...+.++++|+++||+|||++++.+..+..++ .+++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~ 109 (479)
T PRK10077 30 VISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGF 109 (479)
T ss_pred eehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3445555555544 888899888766666666666679999999999999999999988887 544432
Q ss_pred --------chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH---
Q psy10432 100 --------SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA--- 168 (440)
Q Consensus 100 --------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--- 168 (440)
++++.++++|+++|++.|...+...+++. |++|+++|++++++.+.+..+|.++++.+++.+.
T Consensus 110 ~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~------e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 183 (479)
T PRK10077 110 TSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIA------EIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSG 183 (479)
T ss_pred ccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHH------hhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 23567889999999999999887777777 9999999999999999999999999988876654
Q ss_pred -----hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCC---CccCC-----------CCccchhhhhhhhcc-----
Q psy10432 169 -----DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPK---TAKSS-----------LLPNSMFSSLKFLFT----- 224 (440)
Q Consensus 169 -----~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~-----------~~~~~~~~~~~~~~~----- 224 (440)
+..|| |+.|++.....++..+ ..+++||+++.. +++++ .+.+...+..+...+
T Consensus 184 ~~~~~~~~gW--r~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (479)
T PRK10077 184 DASWLNTDGW--RYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKT 260 (479)
T ss_pred cccccccCCh--HHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhh
Confidence 23567 8888877666655443 355678876421 00000 000000111111111
Q ss_pred CcchHHH---HHHHHHH------HhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q psy10432 225 NPCLLTL---GIVQSIY------EGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETM 291 (440)
Q Consensus 225 ~~~~~~~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 291 (440)
.+..+.. .....+. ....+.. .++.|.+ +..+ ....+.....++..+++.++.+++.|| +++|+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~ 338 (479)
T PRK10077 261 GGKLLMFGVGVIVIGVMLSVFQQFVGINVV-LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPL 338 (479)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHhChhHH-HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHH
Confidence 1111111 0000000 0011111 1233433 3333 334556667778889999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhH
Q psy10432 292 LTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFI 370 (440)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 370 (440)
+..+..+.+++.+.+ ............ ......++.++.+. ..|..+.++.|..|+++|+++.|+.+...+++
T Consensus 339 ~i~~~~~~~v~~~~l-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g 412 (479)
T PRK10077 339 QIIGALGMAIGMFSL-GTAFYTQAPGIV-----ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIA 412 (479)
T ss_pred HHHhHHHHHHHHHHH-HHHHhcCcccHH-----HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHH
Confidence 988888777776555 222111111111 22222333333333 34778899999999999999999999999999
Q ss_pred HHHHHHHhhc---cccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 371 TCFTLIFIKN---EDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 371 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
..+++..+.. .+...+ ..++...|.+.++..+++.++.+..
T Consensus 413 ~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 413 NYFVSWTFPMMDKNSWLVA-HFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred HHHHHHHhHHHHhccchhh-hccCccHHHHHHHHHHHHHHHHHhc
Confidence 9888654321 123344 5566777777776666665554443
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=1.2e-28 Score=236.74 Aligned_cols=350 Identities=11% Similarity=-0.010 Sum_probs=239.1
Q ss_pred hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc--ccchhHHHHHHHHHHHHHHhhhc
Q psy10432 44 DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK--FSSDFYILLYGRLFGGIATSILF 120 (440)
Q Consensus 44 ~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~--~~~~~~~l~~~r~l~G~~~~~~~ 120 (440)
|++++..+.|.+.+.......+.+++.|+++||+|||+++..+.++.+++ .++. ...+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 78899999988666665555555679999999999999999999888887 5443 34668889999999999999998
Q ss_pred cccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432 121 SGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-LNLGPIAPFAVAIPFLLGSTLFIYFCWEE 199 (440)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~e 199 (440)
|....++. |++|+++|++++++...+..+|.+++|++++.+.+. .|| |..|++.++..++..++.+...+|
T Consensus 150 ~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw--~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 150 PATHKIIV------KWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGW--PMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hhHHHHHH------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--CeehhhhhHHHHHHHHHHHHHhcC
Confidence 87777777 999999999999999999999999999999999988 499 878877776665555544555555
Q ss_pred cCCCCCccCC-------------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cchhh
Q psy10432 200 HYDPKTAKSS-------------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGL 262 (440)
Q Consensus 200 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~ 262 (440)
+|+++++.++ ....+.+.++++++++|.++...+..+..+...+.+....+.++ +..+ .+.++
T Consensus 222 ~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~ 301 (465)
T TIGR00894 222 DPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGL 301 (465)
T ss_pred CcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHH
Confidence 5432211100 00011123477888999999888887777777766655334444 3223 56788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhH----H--HHHHHHHHH-HHHHHHhhhccccchhhcchhHHHHHHHHHHHh
Q psy10432 263 VFSCFMISIMIGSKIYSILILKYFKPETML----T--LTVYLATFS-ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEIS 335 (440)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (440)
..+...++.+++.++.|++.|| .++++.. . ......... ....+.........+ ..+..+.+..++
T Consensus 302 ~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~ 374 (465)
T TIGR00894 302 LSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY------LTIIILTLANAV 374 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH------HHHHHHHHHHHH
Confidence 8888899999999999999997 5433211 0 111111111 111101111111111 122233333334
Q ss_pred hhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCc--cchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 336 VGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGK--LIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 336 ~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
.+...+.......+..| +.+|.+.|+.+....++..++|.+. +.+.+. ..++...|.+.++..+++.++....
T Consensus 375 ~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~---g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 375 SSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLA---GNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred hhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhh---heeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 44444555555566655 4899999999999999999999855 555441 2457888888888777776665443
No 59
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.97 E-value=1e-28 Score=215.82 Aligned_cols=294 Identities=47% Similarity=0.915 Sum_probs=249.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHh
Q psy10432 8 KTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYG 87 (440)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~ 87 (440)
.+++..++++++++.++.+...+||+.+|+++.+|+++|.+..|++.+|..|+..+.+++++.|.++||+|||+..+..+
T Consensus 27 ~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~c 106 (354)
T PF05631_consen 27 STNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFC 106 (354)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHH
Q psy10432 88 IVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHF 166 (440)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~ 166 (440)
+++++++++-..++++.++++|++.|++.+..+++..+|+..++ .++-+|+|..+..++... ..+++-.+.+.+++.+
T Consensus 107 ily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh-~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~ 185 (354)
T PF05631_consen 107 ILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEH-NKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANV 185 (354)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHH
Confidence 99999988888999999999999999999999999999999776 344567777888887776 5566777888888889
Q ss_pred HHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432 167 FADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI 246 (440)
Q Consensus 167 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (440)
+.+..+.+...||........+..+++...++|+..+.+++. ...++..+.++.+++||+++.+.+.+.++.+.+|.+.
T Consensus 186 l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~-~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FV 264 (354)
T PF05631_consen 186 LADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSS-SLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFV 264 (354)
T ss_pred HHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCccccc-chHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhe
Confidence 888877766899999999998888888888899876533322 1345567778889999999999999999999999999
Q ss_pred Hhhhhhhhcc--CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432 247 FVWTPVLEVL--SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI 303 (440)
Q Consensus 247 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 303 (440)
..|.|.++.. +...|++++.+.++.++|+.+..++..|+.+.+..+........+++
T Consensus 265 flWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l 323 (354)
T PF05631_consen 265 FLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSL 323 (354)
T ss_pred eeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9999999643 37789999999999999999998877653455555555444444443
No 60
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=6e-29 Score=241.58 Aligned_cols=352 Identities=13% Similarity=0.054 Sum_probs=247.4
Q ss_pred hhHhhhHhhcCCC---hhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432 36 PYVYKVYKDYGYD---EKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF 111 (440)
Q Consensus 36 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 111 (440)
+..+.+.+|+|++ +.+.++..++..+...+.+++.|+++||+|||++++.+.++.+++ .+.++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4566777999998 888888666666666666679999999999999999999999888 688899999999999999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
.|++.+...+...+++. |++|+++|+++.++...+..+|.+++|.++..+.+ | |+.+++..+..++..+
T Consensus 190 ~G~~~~~~~~~~~~~~~------e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---w--r~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNT------EFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---W--RWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHhhccchHHHHHHHhh------eecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---H--HHHHHHHHHHHHHHHH
Confidence 99999998777777777 99999999999999999999999999998877654 6 8888777766655544
Q ss_pred HHHHhccccCCC----CCcc--------------C-----------CCC--ccchhhhhhhhccCcchHHHHHHHHHHHh
Q psy10432 192 FIYFCWEEHYDP----KTAK--------------S-----------SLL--PNSMFSSLKFLFTNPCLLTLGIVQSIYEG 240 (440)
Q Consensus 192 ~~~~~~~e~~~~----~~~~--------------~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (440)
. .+.+||+++. .+.+ . +++ .+.....+++++++|.++...+...+.+.
T Consensus 259 ~-~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 259 L-SWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred H-HHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 4 3567887541 0000 0 000 00001245677888888775555444433
Q ss_pred HHHHHHHhhhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhc
Q psy10432 241 IMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVL 320 (440)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (440)
.............+..+..........++..+++.++.+++.|| ++||+.+..+....+++.+.+ ....... .+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~-~~~~~~~-~~--- 411 (505)
T TIGR00898 338 TTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLL-LFVPVDL-YF--- 411 (505)
T ss_pred HHHHHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHH-HHcCCCc-hH---
Confidence 33222111111113333334455556678888999999999997 999999888887777766544 2211111 11
Q ss_pred chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHH
Q psy10432 321 STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTA 400 (440)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (440)
.......+..++.+..++..+.+..|..|++.|+++.|+.++...+|+.++|.+. + .+ ..+....+.+.++
T Consensus 412 ---~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~---~--~~-~~~~~~~~~~~~~ 482 (505)
T TIGR00898 412 ---LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLV---Y--LG-EKWLFLPLVLFGG 482 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHH---H--HH-HHHHhhHHHHHHH
Confidence 1223333444455566778888999999999999999999999999999999854 3 23 3345566777777
Q ss_pred HHHHHHHHHHHhhh
Q psy10432 401 CLLVALLASCVFKR 414 (440)
Q Consensus 401 ~~~~~~~~~~~~~~ 414 (440)
+.+++.+....+++
T Consensus 483 ~~~~~~~~~~~lpe 496 (505)
T TIGR00898 483 LALLAGILTLFLPE 496 (505)
T ss_pred HHHHHHHHHHcCcC
Confidence 66666666555544
No 61
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=3.7e-29 Score=241.92 Aligned_cols=364 Identities=14% Similarity=0.104 Sum_probs=238.3
Q ss_pred HHhhhhhHhhhHhhcCCC--------hhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc---
Q psy10432 31 DWIQGPYVYKVYKDYGYD--------EKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF--- 98 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s--------~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~--- 98 (440)
.....+..+.+.++++.+ ..+.+++.++..+...+.++++|+++||+|||++++.+.++..++ +++.+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 123 (481)
T TIGR00879 44 TGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF 123 (481)
T ss_pred cchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334555666666666655 788898888888888888889999999999999999999998887 55533
Q ss_pred cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH---HHHHhhcccCc
Q psy10432 99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTA---HFFADILNLGP 175 (440)
Q Consensus 99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~~~~gw~~ 175 (440)
..+++.+++.|+++|++.+...+...+++. |++|+++|++++++.+.+..+|..+++.++ ....+..+|
T Consensus 124 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w-- 195 (481)
T TIGR00879 124 ALSVEMLIVGRVLLGIGVGIASALVPMYLS------EIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGW-- 195 (481)
T ss_pred ccchHHHHHHHHHHHhhhhHHHhHHHHHHH------ccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccH--
Confidence 345668999999999999999776666666 999999999999999999999999999999 666666788
Q ss_pred hhhHHHHHHHHHHHHHHHHHhccccCCC----CCccC-----------CCCccchh------------------hhhhhh
Q psy10432 176 IAPFAVAIPFLLGSTLFIYFCWEEHYDP----KTAKS-----------SLLPNSMF------------------SSLKFL 222 (440)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~-----------~~~~~~~~------------------~~~~~~ 222 (440)
|+.|.+.....++. ++..+++||+++. ++.++ +.+..... ..++..
T Consensus 196 ~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (481)
T TIGR00879 196 RIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSL 274 (481)
T ss_pred HHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence 88887755544433 3344566776421 00000 00000000 001112
Q ss_pred ccC-----cchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH
Q psy10432 223 FTN-----PCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT 293 (440)
Q Consensus 223 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~ 293 (440)
++. +..+.......+...........+.|.+ +..+ ...+.......++.+++.++.+++.|| +++|+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~ 353 (481)
T TIGR00879 275 FSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLL 353 (481)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHH
Confidence 221 1111111111121111111112344444 4333 445777788888999999999999997 99999888
Q ss_pred HHHHHHHHHHHHHHHh--hhcccc--chhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhh
Q psy10432 294 LTVYLATFSITVSTVL--TSSLFD--SRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTN 368 (440)
Q Consensus 294 ~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 368 (440)
.+..+..++.+.+... ...... .... ..+....++..+.+. ..+....+..|..|++.|+++.|+.+...+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 429 (481)
T TIGR00879 354 IGAAGMAICLFVLGILGASFVTGSSKSSGN----VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANW 429 (481)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCcccchhH----HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHH
Confidence 8777666665444211 111110 0011 112222222223333 345666777999999999999999999999
Q ss_pred hHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 369 FITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 369 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
++..++|.+. +...+ ..++...|.+.+++.+++.+.....
T Consensus 430 lg~~i~~~~~---~~~~~-~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 430 LANFIVGFLF---PTMLE-SIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHHHHHHH---HHHHH-hcCccceehhHHHHHHHHHHHHhee
Confidence 9999999855 55556 5677888888877777766655443
No 62
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=4.2e-28 Score=228.78 Aligned_cols=327 Identities=19% Similarity=0.184 Sum_probs=230.6
Q ss_pred HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432 32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL 110 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 110 (440)
....+..|.+.+++|.++.+.+++.........+..++.|+++||+|||+.+..+..+..++ .+..++++++.+++.|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRF 113 (398)
T ss_pred HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 34556677777999999999999887777777777789999999999999999999888888 67778899999999999
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 190 (440)
+.|++.+...+...+++. |++|+++|++++++......+|..++|.+++.+.+..|| +..+.+.+....+..
T Consensus 114 ~~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~--~~~~~~~~~~~~~~~ 185 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVS------EYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW--RSLFYVGGIAPLLLL 185 (398)
T ss_pred HHhcccccchhhHHHHHH------HHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc--eeehhhhhhHHHHHH
Confidence 999999998887777777 999999999999999999999999999999999998899 767766654444444
Q ss_pred HHHHHhccccCCCCCcc-------------------------CC-CCccchhhhhhhhccCc---chHHHHHHHHHHHhH
Q psy10432 191 LFIYFCWEEHYDPKTAK-------------------------SS-LLPNSMFSSLKFLFTNP---CLLTLGIVQSIYEGI 241 (440)
Q Consensus 191 ~~~~~~~~e~~~~~~~~-------------------------~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 241 (440)
++....+||+++...++ ++ .+.+..++..+.+++++ ..+.......+....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (398)
T TIGR00895 186 LLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVG 265 (398)
T ss_pred HHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 55555667654310000 00 00011111222233322 222223333333333
Q ss_pred HHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccch
Q psy10432 242 MYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSR 317 (440)
Q Consensus 242 ~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (440)
.+.. ..+.|.+ +..+ .+.+.......++.+++.++.+++.|| +++++... ......+....+.. . ....+
T Consensus 266 ~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~--~-~~~~~ 339 (398)
T TIGR00895 266 VYFL-TNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTAL-LLLLGAVFAVLVGS--T-LFSPT 339 (398)
T ss_pred HHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHH-HHHHHHHHHHHHHH--H-hhCHH
Confidence 3333 2344444 3333 567888888999999999999999997 98874333 33333332222211 1 11111
Q ss_pred hhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 318 RVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
.......+.+++.+...+...+...+..|+++|+++.|+.+...+++..++|.+.
T Consensus 340 ------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 340 ------LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 2344445566677778888899999999999999999999999999999999844
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=5.2e-28 Score=224.08 Aligned_cols=335 Identities=20% Similarity=0.260 Sum_probs=268.2
Q ss_pred HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432 25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY 103 (440)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~ 103 (440)
+..........+..+.+.+++|.++.+.++..........+.+|+.|+++||+|||+.+..+..+..++ ....+.++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 88 (352)
T cd06174 9 FLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLW 88 (352)
T ss_pred HHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHH
Confidence 344445666778887888999999999999888888888888899999999999999999999999998 6777789999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432 104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI 183 (440)
Q Consensus 104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 183 (440)
.+++.|++.|++.+...+...+++. |++|+|+|++.+++.+...++|..++|.+++.+.+..+| +..+.+..
T Consensus 89 ~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~ 160 (352)
T cd06174 89 LLLVGRFLLGLGGGALYPAAAALIA------EWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW--RWLFLILA 160 (352)
T ss_pred HHHHHHHHHHcccccccHhHHHHHH------HhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHH
Confidence 9999999999999999887777777 999999999999999999999999999999999999888 77777777
Q ss_pred HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc----cCCc
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV----LSPP 259 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 259 (440)
...++..+...+ .+ |+++...+...+.......+....+++.++ ...+
T Consensus 161 ~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (352)
T cd06174 161 ILGLLLALLLLF-LL---------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE 212 (352)
T ss_pred HHHHHHHHHHHH-HH---------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 666555444332 23 345555555555556555554544544432 2267
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCch-hHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPET-MLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM 338 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (440)
.+.......++.+++.++.+++.|| .++|+ .+..+.....++.... .... + . . .......+.+++.+.
T Consensus 213 ~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~-~~~~--~--~-~----~~~~~~~~~g~~~~~ 281 (352)
T cd06174 213 AGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLL-ALAP--S--L-A----LLLVALLLLGFGLGF 281 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHH-HHhc--c--H-H----HHHHHHHHHHHHHhc
Confidence 7888999999999999999999997 99998 7777777776666554 2111 1 1 1 345555667777888
Q ss_pred hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 339 YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 339 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
..+.......|..|+++|++.+|+.+...+++..+++.+. +...+ ..+++..+.+.+++.+++.+...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~---g~l~~-~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 282 AFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA---GLLLD-TGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred cchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhc-ccCcchHHHHHHHHHHHHHHHhe
Confidence 8999999999999999999999999999999999999954 66777 77889999998888877766543
No 64
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=1.8e-27 Score=224.10 Aligned_cols=366 Identities=14% Similarity=0.088 Sum_probs=244.3
Q ss_pred HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-----chhH-HHHHHhHHHHHh-h
Q psy10432 22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-----GRKL-ICISYGIVYTLC-C 94 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~~~-~ 94 (440)
.+++............+|...++.|.|.+++|++..+... .+..|++|+++||+ |||| .++.+..+.+++ .
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 3344444445667778878889999999999997666665 36668999999999 8876 677777777766 4
Q ss_pred hhccc---chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Q psy10432 95 LTKFS---SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI- 170 (440)
Q Consensus 95 ~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~- 170 (440)
+.++. ++++.+++..++.++..+...++.++++. |+.|+|||+++.++...+.++|.++++.+++.+.+.
T Consensus 84 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~ 157 (402)
T PRK11902 84 AMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYST------DVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV 157 (402)
T ss_pred HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 44444 45777888888888888888887777777 999999999999999999999999999999999885
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhh
Q psy10432 171 LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWT 250 (440)
Q Consensus 171 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (440)
.|| |..|++.+...++..+ ..+..||+++++++++ ...++..+++++++|||.++...+...+............+
T Consensus 158 ~gw--~~~f~i~a~~~l~~~l-~~~~~~e~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 233 (402)
T PRK11902 158 LGW--GNTYLLMAGLMLAGAL-TTLWAPEPEVPARPPR-SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLST 233 (402)
T ss_pred cCH--HHHHHHHHHHHHHHHH-HHHhcCCCcccccccc-hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHH
Confidence 488 8888877766554433 3445677654322211 11223456788899999988766665555443332222234
Q ss_pred hhh-hccC---CchhhHHHHHH-HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432 251 PVL-EVLS---PPLGLVFSCFM-ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 251 ~~~-~~~~---~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (440)
+++ +..+ .+.++.....+ ++.+++..+.+++.|| +++++.+..+.....+..+.+......++..+ ..
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~------~~ 306 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLW------TM 306 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH------HH
Confidence 444 3333 55666665544 4688999999999997 99888876666555544433312111111112 12
Q ss_pred HHHHH----HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432 326 FVAFL----IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC 401 (440)
Q Consensus 326 ~~~~~----~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (440)
..... ..++..+...+....++++..|.++++ ..+...+++...++. .+ |.+.| ..|++..|...+++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~--~~-G~l~~-~~G~~~~f~~~~~~ 378 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGP--TS-GYLVE-AYGWPGFYLMTVVI 378 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHH--HH-HHHHH-HhChHHHHHHHHHH
Confidence 22222 223334445666677777777766554 444444555554444 24 66778 88999999998888
Q ss_pred HHHHHHHHHHhhh
Q psy10432 402 LLVALLASCVFKR 414 (440)
Q Consensus 402 ~~~~~~~~~~~~~ 414 (440)
.+++.++.+..++
T Consensus 379 ~~~~~~~~~~~~~ 391 (402)
T PRK11902 379 ALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHhh
Confidence 8777666544443
No 65
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=3.4e-27 Score=220.68 Aligned_cols=352 Identities=10% Similarity=0.063 Sum_probs=245.4
Q ss_pred HHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchh----HHHHHHhHHHHHhhhhccc
Q psy10432 24 FFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRK----LICISYGIVYTLCCLTKFS 99 (440)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr----~~l~~~~~~~~~~~~~~~~ 99 (440)
++....+.++..|++|...+|+|.|.+++|+..++..+...+.+|++|+++||+||| +.+.+......+ .....+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~ 91 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AFWFGA 91 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHhc
Confidence 444445567789999888899999999999998888888888889999999999984 333222221111 234456
Q ss_pred chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhH
Q psy10432 100 SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPF 179 (440)
Q Consensus 100 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~ 179 (440)
++++.+++.|++.|++.+...|...+... ++ +++|+++++......++|..+||++++++.+++|| |..|
T Consensus 92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~------~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~--~~~f 161 (382)
T PRK11128 92 HSFWLLFVAIGLFNLFFSPLVPLTDALAN------TW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGE--QAIL 161 (382)
T ss_pred ccHHHHHHHHHHHHHHHcccccHHHHHHH------HH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCh--hHHH
Confidence 88999999999999999888786665554 55 46788899999999999999999999999999999 7777
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC--
Q psy10432 180 AVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS-- 257 (440)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 257 (440)
+..+...++..+ ..+..||+++++++++ +.++..+++++++|+|+++...+..++............+++.++.+
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s 238 (382)
T PRK11128 162 WILTAGVASMLL-GQLLRPTIMPQGESRQ--QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYS 238 (382)
T ss_pred HHHHHHHHHHHH-HHHccCCCCCcccccc--ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCC
Confidence 766654443333 2334455432221111 11122346788999999988777666665555444444455544343
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 258 -PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 258 -~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
.+.|...+...++.++...+.+++.|| +++++.+..+.....+..+.+ .. .+..+ .......+.+++.
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~-~~---~~~~~------~~~~~~~l~g~~~ 307 (382)
T PRK11128 239 ASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLM-GS---TTALP------WLIVIQILHCGTF 307 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHH-Hh---hhhHH------HHHHHHHHHHHHH
Confidence 567888888888999999999999997 999998888777766655433 21 11112 2344455666677
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhh-hhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLR-VPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL 406 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (440)
+...+....+.++. +++++++..+..+ .....|..++|. .+ |.+.| ..+. ..+...+++.+.+.
T Consensus 308 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~--i~-G~l~~-~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 308 TVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTV--LS-GFLYQ-HLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hccH-HHHHHHHHHHHHHH
Confidence 77788888888776 5666788899886 445567788888 34 77777 6665 45555555554443
No 66
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=1.2e-27 Score=225.40 Aligned_cols=373 Identities=10% Similarity=0.027 Sum_probs=245.2
Q ss_pred HHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccch-hHHHHHHhHHHHHh-hhhcc
Q psy10432 22 IPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGR-KLICISYGIVYTLC-CLTKF 98 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~-~~~~~ 98 (440)
...+..+.+..+..|.++... +++|.|.+++|++.++..+...+.+|++|+++||+|| |+++.++.++.+++ .+..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445656554544 6799999999999888888888888999999999965 77888887777776 56778
Q ss_pred cchhHHHHHHHHHHHHHHhhhccccchhhhccc--cccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q psy10432 99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEH--LNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPI 176 (440)
Q Consensus 99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 176 (440)
.++++.+++.|++.|++.+...+..+++..... .-.|......|.+..| .+|.++||.+++.+....+|
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~--- 159 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN--- 159 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh---
Confidence 889999999999999988777666555432110 0002223334445544 47888899988887333234
Q ss_pred hhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhcc
Q psy10432 177 APFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL 256 (440)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (440)
.+|++.++..++..+ ..+.+||+++++++++....+....+.+.++|+|+++...+..++............+++.++.
T Consensus 160 ~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR00889 160 IQLYITAGSSALLGV-FALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF 238 (418)
T ss_pred HHHHHHHHHHHHHHH-HHhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh
Confidence 345555555444443 3456787653322221111111112345678899988776666665544433333334444332
Q ss_pred C-----------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432 257 S-----------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 257 ~-----------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (440)
+ ...+...+...+..+++.+..+++.|| +++|+.+..+.+...+....+ ... ........ ..
T Consensus 239 g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~-~~~-~~~~~~~~----~l 311 (418)
T TIGR00889 239 GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFF-AYG-DPEYFGYA----LL 311 (418)
T ss_pred cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHc-CcchhhHH----HH
Confidence 2 345888888889999999999999998 999999988888776665444 221 11100111 23
Q ss_pred HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhh-hhhhhHHHHHHHHhhccccccCcc-----chhhHHHHHHH
Q psy10432 326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLR-VPTNFITCFTLIFIKNEDAEGGKL-----IAIHSVFVVCT 399 (440)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 399 (440)
+....+.+++.+...+....++.|..|+++|++++|+.+ ....+|..++|.+. |.+.|.. .+|+..|.+++
T Consensus 312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~---G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 312 FLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS---GVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH---HHHHHHhccccCCchHHHHHHHH
Confidence 334445556667777888888999999999999999997 56788999999844 6666621 46889998888
Q ss_pred HHHHHHHHHHHHhhh
Q psy10432 400 ACLLVALLASCVFKR 414 (440)
Q Consensus 400 ~~~~~~~~~~~~~~~ 414 (440)
++.+++.+......+
T Consensus 389 ~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 389 GYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHhC
Confidence 777776665555444
No 67
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=9.8e-28 Score=223.64 Aligned_cols=332 Identities=17% Similarity=0.166 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHhhhhhHhh-hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc
Q psy10432 22 IPFFLATFSDWIQGPYVYK-VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS 99 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~ 99 (440)
...+..........+..|. +.+++|.|+.+.+++.++......+.+++.|+++||+|||+.++.+.++..++ +++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~ 87 (366)
T TIGR00886 8 FGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA 87 (366)
T ss_pred HHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 4444555556667888875 77999999999999888888888888889999999999999999999999998 677888
Q ss_pred c-hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--------
Q psy10432 100 S-DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-------- 170 (440)
Q Consensus 100 ~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 170 (440)
+ +++.+++.|+++|++.+.. +...+++. |++|+++|+++.++.....++|..+++.+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 88 VQSYSVLLLLRLFIGIAGGSF-ASCMPWIS------FFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred hhhHHHHHHHHHHHHHhchhh-HhHHHHHH------HhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 8 9999999999999986654 44445555 999999999999999988888888888887776653
Q ss_pred --cccCchhhH-HHHHHHHHHHHHHHHHhccccCCCCCccCCCCcc--------chhhhhhhhccCcchHHHHHHHHHHH
Q psy10432 171 --LNLGPIAPF-AVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPN--------SMFSSLKFLFTNPCLLTLGIVQSIYE 239 (440)
Q Consensus 171 --~gw~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (440)
.+| |+.+ +.......+..++.....+|++++++++++.+.+ +..+..++.+++|+++...+...+..
T Consensus 161 ~~~~w--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (366)
T TIGR00886 161 AHLAW--GWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTF 238 (366)
T ss_pred ccccc--cchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHH
Confidence 367 6666 3323333333334444455554322211110100 01114556778888887766666555
Q ss_pred hHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcccc
Q psy10432 240 GIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFD 315 (440)
Q Consensus 240 ~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (440)
...+......++++ +..+ .+.+.......+..++++++.|++.|| +++|+....+......+...+ ........
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 316 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGAFLV-VLGLVSPL 316 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHHHHH-HhcCCCcc
Confidence 55555444344444 3333 567778888888899999999999998 999887776665555544333 22111110
Q ss_pred chhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhH
Q psy10432 316 SRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFI 370 (440)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 370 (440)
... .......+..+..|...+.......+..| +++|++.|+.+...++|
T Consensus 317 ~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 317 SLA-----VFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hHH-----HHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 111 22333334455567766777777778766 79999999999888775
No 68
>KOG4332|consensus
Probab=99.96 E-value=1.8e-28 Score=201.82 Aligned_cols=396 Identities=36% Similarity=0.705 Sum_probs=308.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHh
Q psy10432 8 KTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYG 87 (440)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~ 87 (440)
..++...+++..++.++.+...++|+.+|+++.+|+.+|....++|.+|..|+....+++.+.|.++|+-|||+..+.-+
T Consensus 30 ntsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtyc 109 (454)
T KOG4332|consen 30 NTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (454)
T ss_pred cCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeeh
Confidence 34556677888899999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHH
Q psy10432 88 IVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHF 166 (440)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~ 166 (440)
+.+.++|+.-.++++-.++++|++-|++.+..+++..+|......-++-++.+.....++-.. .++.+-.+++.+.+..
T Consensus 110 itYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~ 189 (454)
T KOG4332|consen 110 ITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNL 189 (454)
T ss_pred HHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHH
Confidence 888888889999999999999999999999999999999986665455555555555555543 5566778888889999
Q ss_pred HHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432 167 FADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI 246 (440)
Q Consensus 167 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (440)
+.++++..+..+|-.++....+...++..-+.|+..++.++++ ...+.+...+.+..++++..+.....++...+|.+.
T Consensus 190 lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kd-lltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFV 268 (454)
T KOG4332|consen 190 LVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKD-LLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFV 268 (454)
T ss_pred HHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHH-HHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheee
Confidence 9999988889999988888877777776667777654433221 233344556678889999999999999999999999
Q ss_pred Hhhhhhhh--ccCCchhhHHHHHHHHHHHHHHHHHHHHhh-ccCCchhHHHHHHHHHHHHHHH-HHhhhccccchhhcch
Q psy10432 247 FVWTPVLE--VLSPPLGLVFSCFMISIMIGSKIYSILILK-YFKPETMLTLTVYLATFSITVS-TVLTSSLFDSRRVLST 322 (440)
Q Consensus 247 ~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 322 (440)
..|.|.++ ..+..-|.+++.+.++.++|+-+..++..| +...+..+.+.+........+. ......+....+.
T Consensus 269 FLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~--- 345 (454)
T KOG4332|consen 269 FLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPS--- 345 (454)
T ss_pred eeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCch---
Confidence 99999995 445778999999999999999999888875 1222334445444444433322 1222233333333
Q ss_pred hHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432 323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL 402 (440)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (440)
..+++++++..+.|+++|...-+-.++.|++.|++.+.+.+.--++...++..-. ...+...+-+.+|.+|....
T Consensus 346 -~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl----h~~~~p~~tr~mf~icS~~~ 420 (454)
T KOG4332|consen 346 -ESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL----HVDAFPTTTRNMFGICSAFL 420 (454)
T ss_pred -HHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec----ccccCccccchhhhhhHHHH
Confidence 5788999999999999999999999999999999999999888877766665521 12222445578899998888
Q ss_pred HHHHHHHHHh
Q psy10432 403 LVALLASCVF 412 (440)
Q Consensus 403 ~~~~~~~~~~ 412 (440)
.++.+....+
T Consensus 421 ~~a~i~~~~L 430 (454)
T KOG4332|consen 421 FVASILQRRL 430 (454)
T ss_pred HHHHHHHHHH
Confidence 7776554443
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=2.1e-27 Score=225.12 Aligned_cols=369 Identities=14% Similarity=0.055 Sum_probs=230.5
Q ss_pred HHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hhc-
Q psy10432 22 IPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LTK- 97 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~~- 97 (440)
...+...++.....|+++... +++|.|+.++|++.++..+...+.+|+.|+++||+||||+++.+..+.++. . ...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 444455555556777875555 459999999999999999999999999999999999999988766655544 2 111
Q ss_pred -ccchhH-HHHHHHHHHHHHHhhhccccchhhhcccccccccc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 98 -FSSDFY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP--VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 98 -~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
.++... .......+.++..+...+.....+. ++.+ ++++++.++......++|..++|++++.+.+. +|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~ 169 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIE------AYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NP 169 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhh------hHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc-Cc
Confidence 111110 0111222223322322221111121 3322 34567788899999999999999999999875 77
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhccccCCCCCc---cCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhh
Q psy10432 174 GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA---KSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWT 250 (440)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (440)
+..|+..+...++..++.++..||++++++. +++.+.+...+..+..+|||.++...+...........+....+
T Consensus 170 --~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~ 247 (420)
T PRK09528 170 --QINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFP 247 (420)
T ss_pred --hHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHH
Confidence 7778777666555554444444443332111 10001112234455678889887655544333333222222233
Q ss_pred hhh----hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432 251 PVL----EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN 323 (440)
Q Consensus 251 ~~~----~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (440)
+++ +..+ ...|...+...++.+++.++.|++.|| +++|+.+..+..+..+..... .+. +..+
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~-~~~---~~~~------ 316 (420)
T PRK09528 248 NFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGS-GFA---TGPL------ 316 (420)
T ss_pred HHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHH-Hhc---ccHH------
Confidence 332 1112 456788888888899999999999998 999998877777666655444 221 1112
Q ss_pred HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH-hhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432 324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW-LRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL 402 (440)
Q Consensus 324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (440)
.......+.+...+...+....++.+..|++.+++..+. .++..++|..++|.+. |.+.| ..|++..|...+++.
T Consensus 317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~---G~l~~-~~G~~~~f~~~~~~~ 392 (420)
T PRK09528 317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLA---GNLYD-SIGFQGTYLILGGIV 392 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHH---HHHHH-hhCchHHHHHHHHHH
Confidence 122333333444555555666777888899999888765 6777889999999854 77888 788999999888877
Q ss_pred HHHHHHHHHhhh
Q psy10432 403 LVALLASCVFKR 414 (440)
Q Consensus 403 ~~~~~~~~~~~~ 414 (440)
++..++.+...+
T Consensus 393 ~i~~~~~~~~~~ 404 (420)
T PRK09528 393 LLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHHhc
Confidence 766655554433
No 70
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=9.7e-27 Score=218.36 Aligned_cols=344 Identities=13% Similarity=0.052 Sum_probs=244.9
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchhHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDFYIL 105 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~~~l 105 (440)
..++..|.+|.+.+++|.|+.+.|++.+..+....+.+++.|++.||+|||++++.+.++.+++ .+. ...++++.+
T Consensus 18 ~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~ 97 (410)
T TIGR00885 18 ANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLF 97 (410)
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 4567789999999999999999999877777777777789999999999999999999999998 443 234689999
Q ss_pred HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------
Q psy10432 106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI--------------- 170 (440)
Q Consensus 106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------------- 170 (440)
++.|++.|+|.+...+..++++. +..|+++|++..++.+...++|..+||.+++.+...
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~ 171 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYIL------VMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSP 171 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHH------HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence 99999999999999887777777 888999999999999999999999999999887532
Q ss_pred -----------cccCchhhHHHHHHHHHHHHHHHH-HhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHH
Q psy10432 171 -----------LNLGPIAPFAVAIPFLLGSTLFIY-FCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIY 238 (440)
Q Consensus 171 -----------~gw~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (440)
.+| |.+|++.+.+.++..+... ...||.++++ + ++.+..+..++++|+|+++...+..++.
T Consensus 172 ~~~~~~~~~~~~~w--~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~f~y 244 (410)
T TIGR00885 172 EELSAIKHSDLASV--QTPYMIIGAVVLAVALLIMLTKMPALNHSD--A---KQISFSASLSRLARIRHYREGVIAQFFY 244 (410)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCccc--c---ccccchhhHHHHHhChhHHHHHHHHHHH
Confidence 346 8888777766554443332 2234321111 1 1112233556778889988877776666
Q ss_pred HhHHHHHHHhhhhhhhcc--C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432 239 EGIMYTFIFVWTPVLEVL--S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL 313 (440)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~--~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (440)
.+......++.+++.++. + ...+...+....+..+|+++.+++.|| +++++.+........+..+.. ....
T Consensus 245 vg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~~ll~-~~~~-- 320 (410)
T TIGR00885 245 VGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMALCLGS-IFAG-- 320 (410)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHH-HHcC--
Confidence 555545544444444322 2 222334555557788999999999998 999988777776666655444 2111
Q ss_pred ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccc----
Q psy10432 314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLI---- 389 (440)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~---- 389 (440)
+ . ...+.+.+.+++.+..+|...++..+..+++......++.... +|+.+.|.+. |.+.| ..
T Consensus 321 ~--~------~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~---G~~~d-~~~~~~ 386 (410)
T TIGR00885 321 G--H------VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQ---GFIID-MKEIAA 386 (410)
T ss_pred C--h------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHH---HHHHH-Hhcccc
Confidence 1 1 1244444555667778899999999998877654444444433 8999999966 66777 32
Q ss_pred --hhhHHHHHHHHHHHH
Q psy10432 390 --AIHSVFVVCTACLLV 404 (440)
Q Consensus 390 --~~~~~~~~~~~~~~~ 404 (440)
+++..|.+...+.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 387 APAVNTSFILPLLCFAV 403 (410)
T ss_pred cCccchHHHHHHHHHHH
Confidence 467777765444443
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=3.5e-27 Score=218.82 Aligned_cols=320 Identities=14% Similarity=0.107 Sum_probs=224.9
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-----chhHHH-HHHhHHHHHh-hhhccc---chh
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-----GRKLIC-ISYGIVYTLC-CLTKFS---SDF 102 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~l-~~~~~~~~~~-~~~~~~---~~~ 102 (440)
+..+..|.+.+|+|+|.+++++...++ ....+ .+++|+++||+ ||||.+ +.+.+..++. ...++. .+.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 355677788899999999999876443 22232 67999999998 899974 5666666666 445555 456
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cC
Q psy10432 103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN--------LG 174 (440)
Q Consensus 103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~ 174 (440)
+.+....++.+++.+...++.++++. |++|+|+|+++.++...+.++|.++++.+++.+.+..+ |
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~------~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w- 156 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRL------EILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW- 156 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc-
Confidence 66777788888888888787777777 99999999999999999999999999999999998888 7
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcc---hHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432 175 PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPC---LLTLGIVQSIYEGIMYTFIFVWTP 251 (440)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 251 (440)
|..|++.++..++..+..++..||++++++++ ++..++.++.++.++++|. ++...+...+.....+......++
T Consensus 157 -r~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (356)
T TIGR00901 157 -GYIFFWTALLILPGLLVTLFLAKEPQEDASVP-KPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTL 234 (356)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccCCCcccccc-hhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98998888766655444444456653322111 1112234456777888776 555555555555555555444454
Q ss_pred hhhccC---CchhhHHHHHH-HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc-c----chhhcch
Q psy10432 252 VLEVLS---PPLGLVFSCFM-ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF-D----SRRVLST 322 (440)
Q Consensus 252 ~~~~~~---~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~ 322 (440)
++++.+ .+.+......+ ++.+++.++.+++.|| +++|+.+..+.++..+............. . +...
T Consensus 235 ~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 310 (356)
T TIGR00901 235 FLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL--- 310 (356)
T ss_pred HHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH---
Confidence 444344 45566666555 5778999999999997 99999888777776665543322211110 0 0111
Q ss_pred hHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhh
Q psy10432 323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTN 368 (440)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 368 (440)
.......+.+++.+...+...++.+|.+|+++||+.+|+.+...+
T Consensus 311 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 311 -MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred -HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 234444456677888999999999999999999999999887654
No 72
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.8e-26 Score=223.36 Aligned_cols=349 Identities=12% Similarity=0.050 Sum_probs=216.3
Q ss_pred CChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccch------hHHHHHHHHHHHHHHhhh
Q psy10432 47 YDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSD------FYILLYGRLFGGIATSIL 119 (440)
Q Consensus 47 ~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~------~~~l~~~r~l~G~~~~~~ 119 (440)
.++.+.+++.........+..+++|+++||+|||+.+..+.++..++ .+++++++ ++.++++|+++|++.+..
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence 44555566555555555555569999999999999999999988888 66666654 788999999999999999
Q ss_pred ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------cccCchhh
Q psy10432 120 FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI---------------------LNLGPIAP 178 (440)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------------~gw~~~~~ 178 (440)
.+....++. |++|+++|+++.++.+....+|.++++.++..+... .+|.||..
T Consensus 133 ~~~~~~~~~------e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~ 206 (502)
T TIGR00887 133 YPLSAIITS------EFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRIL 206 (502)
T ss_pred hHHHHHHHH------HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHH
Confidence 887777777 999999999999999999999999999988766431 12334988
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCC----CCc-c------------C-CCCc----------cchhhhhhhhccC---cc
Q psy10432 179 FAVAIPFLLGSTLFIYFCWEEHYDP----KTA-K------------S-SLLP----------NSMFSSLKFLFTN---PC 227 (440)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~e~~~~----~~~-~------------~-~~~~----------~~~~~~~~~~~~~---~~ 227 (440)
+.+..+..++. .+..+++||+|+- +++ + + +.+. +..+.++++++++ ++
T Consensus 207 ~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (502)
T TIGR00887 207 IGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWR 285 (502)
T ss_pred HHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhH
Confidence 87776665543 3345678998651 110 0 0 0000 0011235555442 22
Q ss_pred hHHHHH----HHHHHHhHHHHHHHhhhhh-hhccC---Cchh-----------h-HHHHHHHHHHHHHHHHHHHHhhccC
Q psy10432 228 LLTLGI----VQSIYEGIMYTFIFVWTPV-LEVLS---PPLG-----------L-VFSCFMISIMIGSKIYSILILKYFK 287 (440)
Q Consensus 228 ~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~---~~~g-----------~-~~~~~~~~~~~~~~~~g~l~~r~~~ 287 (440)
.+...+ ..+......+... .+.|. ++..+ ...+ . ......++.+++.++.+++.|| +|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~y~~~-~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~g 363 (502)
T TIGR00887 286 HGKHLLGTAGSWFLLDIAFYGVN-LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IG 363 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc-cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hc
Confidence 211111 1111122222222 23333 33332 1111 1 1233445667788999999997 99
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh-chhhhHHhHhccCCcchhhHHHHHHhhhh
Q psy10432 288 PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG-MYCPVTGYLRGRIIPEKARATITNWLRVP 366 (440)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 366 (440)
||+.+..+..+..++...+......... .. ......+..+..+ ...+..+.+..|.+|++.|+++.|+.+..
T Consensus 364 RR~~l~~~~~~~~~~~~~l~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 364 RKPIQLMGFFILTVLFFVLGFAYNHLST-HG------FLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcch-hH------HHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence 9998877776666655444221111010 10 1111111111112 23456667789999999999999999999
Q ss_pred hhhHHHHHHHHhhccccccCc---------cchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 367 TNFITCFTLIFIKNEDAEGGK---------LIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 367 ~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
..+++.++|.++ +...+. ..++...|.+.+++.+++.+..+.+++
T Consensus 437 ~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpE 490 (502)
T TIGR00887 437 GKAGAIIGQFGF---LYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPE 490 (502)
T ss_pred hhhHHHHHHHHh---hhhhccccccccccccccchHHHHHHHHHHHHHHHHheEecc
Confidence 999999999855 434331 134456677777666666555443443
No 73
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=1e-26 Score=246.72 Aligned_cols=373 Identities=12% Similarity=0.012 Sum_probs=247.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHh-----hhHhhcCCCh-hhHHHHHHHHHHHHhhhhccccccccccchhHHHHH---HhHH
Q psy10432 19 RYFIPFFLATFSDWIQGPYVY-----KVYKDYGYDE-KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICIS---YGIV 89 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~s~-~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~---~~~~ 89 (440)
.++...+++.+++++....+. .+..+.+.+. ...++..++..+...+++|++|+++||+|||+++.. ..+.
T Consensus 15 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~ 94 (1140)
T PRK06814 15 PLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIG 94 (1140)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHH
Confidence 344555566666544332221 1223333322 345566666777777777899999999999998643 2222
Q ss_pred HHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 90 YTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 90 ~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
..+. ......++++.++++|+++|++.+...|+..+.+. |++++++|++++++.+++.++|.++||++++++.
T Consensus 95 ~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~------~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~ 168 (1140)
T PRK06814 95 IAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILP------DHLNKDELLGANALVEAGTFIAILLGTIIGGLAT 168 (1140)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhH------hhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 23334589999999999999999999898877777 9999999999999999999999999999999999
Q ss_pred hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC--CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432 169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS--SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI 246 (440)
Q Consensus 169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (440)
+..+| +..|.......+ ..++..+.+|+++++++..+ ....++..+.++.+.++|.++...+...+.+.....+.
T Consensus 169 ~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1140)
T PRK06814 169 ISGNF--VILVALLMGIAV-LGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVL 245 (1140)
T ss_pred hcccc--HHHHHHHHHHHH-HHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999 777644333333 33444555666543322111 11112345678888999999988777777666665554
Q ss_pred Hhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhc--c-ccc---
Q psy10432 247 FVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS--L-FDS--- 316 (440)
Q Consensus 247 ~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~--- 316 (440)
...++++ +..+ ...|++.+..+++.++++++.+++.|| ..+++.+..+.++..+..+.+...... . ...
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 5344444 3323 668899999999999999999999986 666665555554444433333111000 0 000
Q ss_pred ----hhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhh
Q psy10432 317 ----RRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIH 392 (440)
Q Consensus 317 ----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 392 (440)
...+......+...+++++.+...+...+++++.+|++.+|+++|+.++..+++..+++.+. +.+.+...++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~---g~l~~~~~~~~ 401 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL---ALLQALGFSIP 401 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH---HHHHHhccCHH
Confidence 00001112344555666777878888999999999999999999999999999999999854 44432244556
Q ss_pred HHHHHHHHHHHH
Q psy10432 393 SVFVVCTACLLV 404 (440)
Q Consensus 393 ~~~~~~~~~~~~ 404 (440)
..+.+++.+.++
T Consensus 402 ~~~~~~~~~~~~ 413 (1140)
T PRK06814 402 WIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHH
Confidence 666555544333
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=1.2e-26 Score=215.04 Aligned_cols=325 Identities=12% Similarity=0.072 Sum_probs=228.3
Q ss_pred HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432 32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL 110 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 110 (440)
....|.+|.+.+++|.|+++.++..++......+.+++.|+++||+||||++..+.++..++ ..+ .+++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 34678899999999999999999888888877777789999999999999999998888877 555 7788999999999
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 190 (440)
+.|++.+...+...+.+. |+++ ++|+++++..+...++|..+++.+++.+.+..+++||..|.......++..
T Consensus 96 ~~g~g~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~ 168 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIK------RDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL 168 (355)
T ss_pred HHHHHHHHHhccchHHHH------HhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 999999987665555554 8775 689999999999999999999999999887754223777765554333222
Q ss_pred HHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHH
Q psy10432 191 LFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCF 267 (440)
Q Consensus 191 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~ 267 (440)
...+||.+++++++++ . .....++.+|||.++...+...+.....+......+.+++..+ .+.+...+..
T Consensus 169 ---~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~ 241 (355)
T TIGR00896 169 ---LAWIPQVRRRVAANQT-T---TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALM 241 (355)
T ss_pred ---HHHhhhhccccCCCCC-C---CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 1234544322221111 1 1123456778888877666555555555554443344444334 5678889999
Q ss_pred HHHHHHHHHHHHHHHhhccC-CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432 268 MISIMIGSKIYSILILKYFK-PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL 346 (440)
Q Consensus 268 ~~~~~~~~~~~g~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 346 (440)
.++.++++++.|++.|| ++ +|+.+..+..+.+++.+.+ .+.. . ... .. ...+++++.|...|...+.
T Consensus 242 ~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~-~~~~--~-~~~------~~-~~~l~g~~~g~~~~~~~~~ 309 (355)
T TIGR00896 242 QLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGL-LFAP--M-HGL------WA-WALVLGLGQGGAFPLALTL 309 (355)
T ss_pred HHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHH-HHhh--h-hHH------HH-HHHHHHHhhhhHhHHHHHH
Confidence 99999999999999997 84 4555556555555554433 2111 1 111 11 2334566677777776665
Q ss_pred hc-cCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432 347 RG-RIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 347 ~~-~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 386 (440)
.. +..+++++++..++.+...+++..++|.+. |.+.|
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~---G~l~~ 347 (355)
T TIGR00896 310 IGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV---GVLHD 347 (355)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 54 444567789999999999999999999854 55555
No 75
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=7.3e-27 Score=219.95 Aligned_cols=333 Identities=17% Similarity=0.134 Sum_probs=221.8
Q ss_pred CChhhHHH-----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH--------HHHHHHHHH
Q psy10432 47 YDEKNIAL-----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY--------ILLYGRLFG 112 (440)
Q Consensus 47 ~s~~~~~~-----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~--------~l~~~r~l~ 112 (440)
.++++.+. .+..++....+.+++.|+++||+||||++..+.++..++ .+++++++++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 44555554 344455555556689999999999999999999999988 6788888875 478899999
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcccCchhhHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD--------ILNLGPIAPFAVAIP 184 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------~~gw~~~~~~~~~~~ 184 (440)
|++.+...+...+++. |+.|+++|++..+..+.+..+|.++++.++..+.. ..+| |..+++...
T Consensus 107 G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w--~~~~~~~~~ 178 (394)
T TIGR00883 107 GFSLGGEWGGAALYLA------EYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGW--RIPFLVSAV 178 (394)
T ss_pred HhhccccccccHHHhh------hcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccch--HHHHHHHHH
Confidence 9999998887777777 99999999999999999999999999998877643 3466 888877665
Q ss_pred HHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcc--hHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---C
Q psy10432 185 FLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPC--LLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---P 258 (440)
Q Consensus 185 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~ 258 (440)
..++.. ......||+++.+++++ +.++..++.++.+++++ ++.......+.....+......++++ +..+ .
T Consensus 179 ~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (394)
T TIGR00883 179 LVLIGL-YLRRNLEETPVFEKAQE--KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSAN 255 (394)
T ss_pred HHHHHH-HHHHhcCCChhHHHHHh--ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 554333 33344566543222111 11111234455555555 55555555444444444444344444 3333 5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432 259 PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM 338 (440)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (440)
+.+.......++.+++.++.+++.|| +++|+.+.....+..+...............+ .......+.+++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~ 328 (394)
T TIGR00883 256 SALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLAVPLLMALLDSGSFT------LFFFLVLGLALIGGM 328 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhcCCchH------HHHHHHHHHHHHHHH
Confidence 67777888889999999999999998 99888766544433332211111111111111 233344455556677
Q ss_pred hhhhHHhHhccCCcchhhHHHHHHh-hhhhhhHHHHHHHHhhccccccCccch-hhHHHHHHHHH
Q psy10432 339 YCPVTGYLRGRIIPEKARATITNWL-RVPTNFITCFTLIFIKNEDAEGGKLIA-IHSVFVVCTAC 401 (440)
Q Consensus 339 ~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 401 (440)
..+...+.+.|.+|+++|+++.++. +....++..++|.+. +.+.+ ..+ ++..+....++
T Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~---g~l~~-~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 329 YTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA---AALVA-MTGDWYAIGYYLAAL 389 (394)
T ss_pred HhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH---HHHHH-HcCcchhHHHHHHHH
Confidence 7888889999999999999999985 445567788888844 66666 445 55555554443
No 76
>KOG1330|consensus
Probab=99.96 E-value=1.2e-28 Score=219.55 Aligned_cols=331 Identities=14% Similarity=0.078 Sum_probs=227.9
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
...+....+.+.+.+|++++..|++..+......+.+|+.|+++|||+||+++.+|..++.++ ++++++..||+++++|
T Consensus 49 r~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R 128 (493)
T KOG1330|consen 49 RYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCR 128 (493)
T ss_pred hhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444566777899999999999888888888888899999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
.+.|+|.+...|..++.+. |.+|+++|++.+++++....+|..+|.+.+..+.+..+| ||+.|...+++.+++
T Consensus 129 ~~vGiGeAs~~~ia~s~Ia------D~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~-Wr~af~~~avl~vi~ 201 (493)
T KOG1330|consen 129 GFVGIGEASYSPIAPSLIA------DSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW-WRWAFRGSAVLGVIV 201 (493)
T ss_pred HHhccchhhhcccchhHhh------hcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc-eEEEEEeehHHHHHH
Confidence 9999999999998888888 999999999999999999999999999999999988774 599999999999988
Q ss_pred HHHHHHhccccCCCCCccCC------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--------hc
Q psy10432 190 TLFIYFCWEEHYDPKTAKSS------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--------EV 255 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 255 (440)
.++..++.+|+++..+++.+ ....+..++.+.+.+++.+....+.....++....+ ..|.|.+ +.
T Consensus 202 ~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~-sww~p~~~~~~~~~~~~ 280 (493)
T KOG1330|consen 202 GLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSL-SWWAPAFIYYSYELIGF 280 (493)
T ss_pred HHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhcccc-chhhhhHHHHHHHHhCC
Confidence 88888888888763322211 122344566667777676655443333333332222 3344544 11
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhh---ccCCchhHHHHHHHHHHH---HHHH-HHhhhccccchhhcchhHHHHH
Q psy10432 256 LSPPLGLVFSCFMISIMIGSKIYSILILK---YFKPETMLTLTVYLATFS---ITVS-TVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
.+...-+...+...++.+|..++|.++|| .+++........+.++.+ .+.+ +.......... . ..+.
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~-~-----~~~i 354 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSM-I-----FGLI 354 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHH-H-----HHHH
Confidence 22344445566667778888888888886 122222233332222222 2122 11122221111 1 1111
Q ss_pred HHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432 329 FLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL 375 (440)
Q Consensus 329 ~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 375 (440)
+.+.+..... .+.....+..+.+|++.|.+++++...+..+.+-.++
T Consensus 355 l~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~ 402 (493)
T KOG1330|consen 355 LFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAAS 402 (493)
T ss_pred HHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCC
Confidence 1111111222 3345556778888999999999998877766554444
No 77
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=1e-25 Score=215.07 Aligned_cols=328 Identities=13% Similarity=0.104 Sum_probs=230.6
Q ss_pred HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc----cchhH-HHHHHhHHHHHh-hhhcccch--
Q psy10432 31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK----FGRKL-ICISYGIVYTLC-CLTKFSSD-- 101 (440)
Q Consensus 31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~-~l~~~~~~~~~~-~~~~~~~~-- 101 (440)
..+..++++..+ +++|+++.++|.+..+..+...+..|+.|+++|| +|||| .++.+....+++ .++...++
T Consensus 15 ~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~ 94 (437)
T TIGR00792 15 FAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS 94 (437)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC
Confidence 344555555555 6789999999999999999999999999999997 68755 466677777776 55544443
Q ss_pred ----hHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q psy10432 102 ----FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFAD------- 169 (440)
Q Consensus 102 ----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------- 169 (440)
...+++.+++.+++.+.......++.. |.. +++||++..++.+.+..+|..+++.+.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~ 168 (437)
T TIGR00792 95 ATGKLVYAYITYILLGLFYSFVNIPYWSLVP------AITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD 168 (437)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcccHhhCcc------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 456677888889988887555555555 776 56899999999999999998887777666654
Q ss_pred hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhh
Q psy10432 170 ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW 249 (440)
Q Consensus 170 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (440)
..+| +..+.+.+++..+..+...+..||+++++++++ +++.+.++.++.+++||.++...+...+.....+.... +
T Consensus 169 ~~g~--~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ 244 (437)
T TIGR00792 169 KFGW--FMFALVLALIGVVSLIICFFGTKERYSEIPKNI-EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNG-V 244 (437)
T ss_pred cccH--HHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc-ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcc-h
Confidence 2356 878777777766666666667787653221111 12234566788899999998877776666665554422 3
Q ss_pred hhhh-hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432 250 TPVL-EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 250 ~~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (440)
.+++ +. .....+.......++.+++.++.+++.|| +++|+.+..+..+.+++.+.+ .+.. +..+ ..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~~--~~~~------~~ 314 (437)
T TIGR00792 245 QVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIF-FFAG--SNLP------LI 314 (437)
T ss_pred hheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHcc--hhHH------HH
Confidence 4444 21 12445666677788999999999999998 999998888877776665444 2211 1111 23
Q ss_pred HHHHHHHHHhhhchhhhHHhHhccCCc-------chhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 326 FVAFLIYEISVGMYCPVTGYLRGRIIP-------EKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
.....+.+++.+...+..+++..|..| ++.+|+.+|+.++...++..+++.+.
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 315 LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556677777888888877755 45689999999999999999998754
No 78
>KOG2532|consensus
Probab=99.96 E-value=3.6e-26 Score=213.78 Aligned_cols=350 Identities=17% Similarity=0.164 Sum_probs=252.7
Q ss_pred hcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--chhHHHHHHHHHHHHHHh
Q psy10432 44 DYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SDFYILLYGRLFGGIATS 117 (440)
Q Consensus 44 ~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~~~~l~~~r~l~G~~~~ 117 (440)
+++.|.++-++ .+..|++++++ +.|+++||+|-|+++..+.++.+++ .+...+ .+++.+++.|++||++.|
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~i---P~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQI---PGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHc---CcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence 57788888887 45566666665 9999999999999999999999998 654443 456788999999999999
Q ss_pred hhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHh
Q psy10432 118 ILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-LNLGPIAPFAVAIPFLLGSTLFIYFC 196 (440)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~ 196 (440)
...|+...... +|.|++||++..++..++..+|.+++.+++|++.+. +|| +..|++.+...++..++...+
T Consensus 144 ~~~pa~~~i~~------~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW--~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 144 VLFPAIGSILA------KWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGW--PSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHhhhhceee------eECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCC--chHHHHHHHHHHHHHHHHHHH
Confidence 99998777777 999999999999999999999999999999999998 899 888988888877666665555
Q ss_pred ccccCCCCCcc-------------CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432 197 WEEHYDPKTAK-------------SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP 259 (440)
Q Consensus 197 ~~e~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 259 (440)
..|+|.+.+.- ++...+...-+++.+++++.+|.+.+..+..+.+.+.+..+.|.++ +..+ .+
T Consensus 216 ~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~ 295 (466)
T KOG2532|consen 216 YSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE 295 (466)
T ss_pred hcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh
Confidence 55555432110 0001111244799999999999999999999998888877444444 3333 88
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCc-----hhHHHHHHHHHHH-HHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPE-----TMLTLTVYLATFS-ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE 333 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (440)
.|+..++..+.+.+..++.|.++|| ..+| ....+...+...+ .+.+.........+. . ..+..+.+..
T Consensus 296 ~G~~salP~l~~~~~k~~~g~lsD~-l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~-~----~a~~~l~~~~ 369 (466)
T KOG2532|consen 296 TGFLSALPFLAMAIVKFVAGQLSDR-LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR-L----LAVILLTIAI 369 (466)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc-h----HHHHHHHHHH
Confidence 9999999999999999999999997 5442 1112221111111 111111111111111 1 2333333333
Q ss_pred HhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc-C-ccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 334 ISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG-G-KLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
...|...+....-..+. .++..+.++|+.+....+.+.++|.+. +.+. + +...|+.+|.+.+++.+++.++...
T Consensus 370 ~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~v---g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 370 GLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLV---GIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHhe---eeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 44555555555555554 458899999999999999999999965 4444 2 2568999999999998888866655
Q ss_pred hhh
Q psy10432 412 FKR 414 (440)
Q Consensus 412 ~~~ 414 (440)
+-+
T Consensus 446 f~s 448 (466)
T KOG2532|consen 446 FGS 448 (466)
T ss_pred eec
Confidence 543
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.2e-25 Score=239.34 Aligned_cols=323 Identities=16% Similarity=0.089 Sum_probs=225.2
Q ss_pred hhHhhhHhhcCCCh--hhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhcccchhHHHHHHH
Q psy10432 36 PYVYKVYKDYGYDE--KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFSSDFYILLYGR 109 (440)
Q Consensus 36 ~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~~~~~~l~~~r 109 (440)
...+.+..+++.+. ...+++.++..+...++++++|+++||+|||++++.+.++..+. . ++...++++.+++.|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 110 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVT 110 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 33434445666543 33566666666666666689999999999999999887765554 2 344567899999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCchhhHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI--------LNLGPIAPFAV 181 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~~~~~~~~ 181 (440)
+++|++.+...|+..+++. |++|+++|++++++.+.+.++|.++|+.+++++.+. ++|. .+.+..
T Consensus 111 ~l~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~-~~~~~~ 183 (1146)
T PRK08633 111 FLLGAQSAIYSPAKYGIIP------ELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGR-IAPAGL 183 (1146)
T ss_pred HHHHHHHHhhchHHHhhhH------HhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-hHHHHH
Confidence 9999999999887777777 999999999999999999999999999999999876 3331 233323
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCcc----CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hcc
Q psy10432 182 AIPFLLGSTLFIYFCWEEHYDPKTAK----SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVL 256 (440)
Q Consensus 182 ~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 256 (440)
......+..++..+.+||.++..+.+ .....+...+.++.++++|.++...+...+.+...+......++++ +..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1146)
T PRK08633 184 VLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVL 263 (1146)
T ss_pred HHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 22233323333344567665432221 1111223345677788888888766666555555444444344444 323
Q ss_pred C---C-chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHH
Q psy10432 257 S---P-PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIY 332 (440)
Q Consensus 257 ~---~-~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (440)
+ . ..+++.+...++.++++++.+++.|| .++++.+.++.++.+++.+.+ .+.. ... ..++...++
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~-----~~~~~~~~~ 332 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLL-PTAP----SLA-----SVLVLFFLF 332 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHH-HHhh----hHH-----HHHHHHHHH
Confidence 3 4 67888999999999999999999997 888887777766665555444 2111 111 234445566
Q ss_pred HHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 333 EISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
+++.+...+...+++++..|++.||+++|+.+++.+++..+++.
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~ 376 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLA 376 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHH
Confidence 66777777888889999999999999999999999988877665
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=1.6e-25 Score=210.56 Aligned_cols=363 Identities=13% Similarity=0.053 Sum_probs=236.2
Q ss_pred HHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh---
Q psy10432 21 FIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL--- 95 (440)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~--- 95 (440)
....+....+.+...|+++... +++|.|+.+++++.++..+...+.+|+.|+++||+|||+.++.+....+++ ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 87 (396)
T TIGR00882 8 GLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFI 87 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555666788886655 568999999999999999999999999999999999999998876666554 21
Q ss_pred hcccc-----hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432 96 TKFSS-----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI 170 (440)
Q Consensus 96 ~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 170 (440)
..+.+ .+..+++.+++.|++.+...|...++.. |.. +++++.++......++|..+||.+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 159 (396)
T TIGR00882 88 YVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIE------KVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI 159 (396)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH------Hhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc
Confidence 11222 2334566788888888877776555544 432 2345577888888899999999999988764
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC---CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432 171 LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS---SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF 247 (440)
Q Consensus 171 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (440)
+| +.+|+..+.+.++..++.+...||+++++++++ .++.+...++.++++|||+++...+..............
T Consensus 160 -~~--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 236 (396)
T TIGR00882 160 -DP--QIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQ 236 (396)
T ss_pred -Cc--hHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 77 888887776666555544444454433221110 001111234567888999987765555444433332322
Q ss_pred hhhhhhhc----cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhc
Q psy10432 248 VWTPVLEV----LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVL 320 (440)
Q Consensus 248 ~~~~~~~~----~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (440)
..+.+++. .+ ...|...+...+...++....+++.|| +++|+.+..+..+..+..... .. ....+
T Consensus 237 ~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~-~~---~~~~~--- 308 (396)
T TIGR00882 237 QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGS-SF---ATTAL--- 308 (396)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHH-Hh---cCChH---
Confidence 22222211 11 346777888888888899999999998 999998887777666655433 21 11111
Q ss_pred chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH-hhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHH
Q psy10432 321 STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW-LRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCT 399 (440)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (440)
.......+.+.+.............+..|++.+++..+. .+....+|..+++.+. |.+.| ..|++..|.+.+
T Consensus 309 ---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~---G~l~~-~~G~~~~f~~~~ 381 (396)
T TIGR00882 309 ---EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLA---GNMYD-SIGFQGAYLVLG 381 (396)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhH---HHHHH-hcccHHHHHHHH
Confidence 122222233333333333334455666677777776665 6778899999999844 78888 779999999988
Q ss_pred HHHHHHHHHH
Q psy10432 400 ACLLVALLAS 409 (440)
Q Consensus 400 ~~~~~~~~~~ 409 (440)
++.++..+..
T Consensus 382 ~~~~i~~~~~ 391 (396)
T TIGR00882 382 CIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHH
Confidence 8776665543
No 81
>KOG3764|consensus
Probab=99.95 E-value=1.1e-26 Score=202.39 Aligned_cols=343 Identities=15% Similarity=0.128 Sum_probs=250.5
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhcc
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFS 121 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 121 (440)
++.+.+.+++|+++..-.....+..|+.|.+.||+|+|..+++|...+..+ +++++.++++.++++|.+||+|.++..+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 445667889999999888888888899999999999999999999999998 8999999999999999999999999977
Q ss_pred ccchhhhccccccccccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432 122 GFESWYVNEHLNYYLFPVEW-LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH 200 (440)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~ 200 (440)
+..++++ |.+|+|+ |++++|+...+.++|.++||++||.+.+..|. +.+|++.+.++++-..+.++.++.+
T Consensus 179 sglamlA------d~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk--~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 179 SGLAMLA------DVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK--SAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hhHHHHH------HHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC--cCcHHHHHHHHHHHHHHHHheeCcc
Confidence 7777777 9998885 79999999999999999999999999999999 9999999998888777777666554
Q ss_pred CCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-----hc---cCCchhhHHHHHHHHHH
Q psy10432 201 YDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-----EV---LSPPLGLVFSCFMISIM 272 (440)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~g~~~~~~~~~~~ 272 (440)
+.+++... + ..++++++++|..+.........+.+. ...-|.+ +. .+.+.|+.+....+...
T Consensus 251 ~~~~~~~~--~----~~~~~~Ll~dP~I~~~agai~~~n~~l----afLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ 320 (464)
T KOG3764|consen 251 EMDPDSTE--Q----GTPMWSLLMDPYILLIAGAITFSNSSL----AFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYA 320 (464)
T ss_pred ccCccccc--c----CccHHHHHhCchHhhhhcchhhccchH----HHhCcccHHHHHHhccCCCcceeeeecccccchh
Confidence 43332111 1 225678889999888666555554444 2344544 11 13588999999999999
Q ss_pred HHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH-HhhhccccchhhcchhHHHHHHHH-HHHhhhchhhhHHhHhccC
Q psy10432 273 IGSKIYSILILKYFKPETMLTLTVYLATFSITVST-VLTSSLFDSRRVLSTNLCFVAFLI-YEISVGMYCPVTGYLRGRI 350 (440)
Q Consensus 273 ~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 350 (440)
++..+.|.+.|| +++.+.+.....+..++..... -+.......+ . ...+.++ ....-....|....+++..
T Consensus 321 ig~~lfg~la~k-~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~-v-----p~~~l~~~i~~~dasl~P~l~~lvd~r 393 (464)
T KOG3764|consen 321 IGTNLFGKLADK-YPHLRWLLSLGGLATVGVSSGPIPFATSIAQLW-V-----PNFGLGFGIGLADASLIPTLGYLVDPR 393 (464)
T ss_pred ccCchHHHHHHh-cCchhHHHHHHHHHHHHHHhchhHhhhhHHHHh-h-----hhHHHHHHHHHHHHHHhhhhHHhcchh
Confidence 999999999998 8865544333333333221110 1111111111 1 1111111 1111222455555555443
Q ss_pred Cc--chhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 351 IP--EKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 351 ~p--~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
-. .+..|.+.++......++.++||. .+ |.+.+ ..|+.+...+.++..++-.-+...++.
T Consensus 394 h~s~~~vYGsVyaIad~a~sla~a~GP~--~g-g~iv~-~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 394 HVSGFNVYGSVYAIADAAFSLAYAIGPT--FG-GSLVE-AIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred hccccceeeeHHHHHHHHHHHhhhcccc--cc-chhee-ehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 126789999999999999999999 56 88888 899999888888877776666555554
No 82
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=1.9e-24 Score=202.86 Aligned_cols=357 Identities=10% Similarity=-0.032 Sum_probs=240.3
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHH--HHHHHHHHhhhhccccc-cccccchhHHHHHHhHH-HHHh--hh--hcccch
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALL--YIAGFASSMIFGIVVGS-IADKFGRKLICISYGIV-YTLC--CL--TKFSSD 101 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~l~~~~~G~-l~Dr~Grr~~l~~~~~~-~~~~--~~--~~~~~~ 101 (440)
...+..|.+|...+|.|.|.+++|.. ..+.+....+.+|+++. ..||+||||..++...+ ..+. .+ .....+
T Consensus 16 ~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~ 95 (390)
T TIGR02718 16 PIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVA 95 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchh
Confidence 35677889988889999999999995 46678888888888844 79999999997555433 2211 11 222322
Q ss_pred -hHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432 102 -FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180 (440)
Q Consensus 102 -~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 180 (440)
...++...++.++..+...+..+++.. |..++++++...+....+..+|.++|+...+++.+++|| |..|+
T Consensus 96 ~~~~~~~~~~~~~~~~a~~d~~~d~~~~------~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw--~~~f~ 167 (390)
T TIGR02718 96 GAGWAVGLLACASLASATQDIATDGMAA------EHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ--RPAFL 167 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHH
Confidence 334445556666777777676666666 888888888888888888899999999999999999999 88888
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---
Q psy10432 181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS--- 257 (440)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 257 (440)
+.+.+.++..+..++. +|++++++++ + ++..+++++++|+|.++......++............++++++.+
T Consensus 168 ~~a~l~~~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~ 242 (390)
T TIGR02718 168 LVACVPLASLVCVLWL-KDRAVASPEA---P-LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPL 242 (390)
T ss_pred HHHHHHHHHHHHHHHc-CCCCcCcccc---c-hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCH
Confidence 8887766555544433 3332221111 1 112345677888898887766666666655555554555554444
Q ss_pred CchhhHHHHHHH-HHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 258 PPLGLVFSCFMI-SIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 258 ~~~g~~~~~~~~-~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
++.|......+. ..+++..+.|++.|| +++++.+..+........+............... .......+..+..
T Consensus 243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 317 (390)
T TIGR02718 243 EWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIA----VAWSCSAFGSLIT 317 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHH----HHHHHHHHHHHHH
Confidence 667777776664 667788999999998 9999888776655533322221111100000111 1222222334456
Q ss_pred hchhhhHHhHhccCCcc-hhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPE-KARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
|...+.......+..++ +.+++.++..+...++|..++|.+. |.+.| ..|++..|..++++.+++...
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~---G~l~~-~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA---GYLTD-RFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHccHHHHHHHHHHHHHHHHH
Confidence 77767677776666665 8899999999999999999999944 77878 788889998888777666543
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.4e-24 Score=205.81 Aligned_cols=357 Identities=12% Similarity=0.073 Sum_probs=227.0
Q ss_pred HhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccchhHH-HHHHHHHHHHHHhh
Q psy10432 42 YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSSDFYI-LLYGRLFGGIATSI 118 (440)
Q Consensus 42 ~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~~~~~-l~~~r~l~G~~~~~ 118 (440)
.+++|.+.++.+++.........+..+++|+++|| +||||+++.+.+++.++ ..++++++... ++++|+++|+|.|.
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~ 121 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGL 121 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccc
Confidence 37899999999887777777777777899999999 99999999999999998 67777766444 55899999999999
Q ss_pred hccccchhhhccccccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHh
Q psy10432 119 LFSGFESWYVNEHLNYYLFPVE--WLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFC 196 (440)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 196 (440)
..|...+.+. |.+|++ +|+++++++..+.++|..+||.+++++.+++|| ++.|++..+... ..++.+..
T Consensus 122 ~~~~~~~li~------~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw--~~~F~i~~i~~~-~~~~~~~~ 192 (489)
T PRK10207 122 FKANPASLLS------KCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY--SVTYNLCGAGLI-IALLVYFA 192 (489)
T ss_pred ccCCHHHHHH------HhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh--HHHHHHHHHHHH-HHHHHHHH
Confidence 9888877777 999887 457799999999999999999999999999999 778877644333 22323323
Q ss_pred ccccCCCC---CccCCCCccch----------------------------------------h--hhhhhhccCcchHHH
Q psy10432 197 WEEHYDPK---TAKSSLLPNSM----------------------------------------F--SSLKFLFTNPCLLTL 231 (440)
Q Consensus 197 ~~e~~~~~---~~~~~~~~~~~----------------------------------------~--~~~~~~~~~~~~~~~ 231 (440)
.++..++. .++++.+.... . ...++..|+|.+...
T Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~ 272 (489)
T PRK10207 193 CRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAF 272 (489)
T ss_pred cchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 33221111 00000000000 0 000112333333222
Q ss_pred HHH-HHHHHhHHHHHHHhhhhhh-hc-cC-------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCch-------hHHH
Q psy10432 232 GIV-QSIYEGIMYTFIFVWTPVL-EV-LS-------PPLGLVFSCFMISIMIGSKIYSILILKYFKPET-------MLTL 294 (440)
Q Consensus 232 ~~~-~~~~~~~~~~~~~~~~~~~-~~-~~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~ 294 (440)
.+. ....+...+.......+.+ ++ .+ .....+...+.+..++.+++.+++.|| .++|+ .+..
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~r-l~~r~~~~~~~~k~~~ 351 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTH-LGSKGKDLSMPMKFTL 351 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHH-HhhCCCCCCcHHHHHH
Confidence 211 1111222222211222233 21 11 123445556667787888899999997 87776 3666
Q ss_pred HHHHHHHHHHHHH----Hhhhc-cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh
Q psy10432 295 TVYLATFSITVST----VLTSS-LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF 369 (440)
Q Consensus 295 ~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 369 (440)
+.++..++++.+. ..... ...... .......+.+++.++..|...+.+.+..|++.+|.++|+.+...++
T Consensus 352 G~~l~~~~~~~~~~~~~~~~~~~~~~s~~-----~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i 426 (489)
T PRK10207 352 GMFLCSLGFLTAAAAGMWFADAQGLTSPW-----FIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA 426 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHH-----HHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 7676666654331 11111 111111 3455666777888889999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc---ccccCc---cchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 370 ITCFTLIFIKNE---DAEGGK---LIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 370 g~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
|+.++..+-... ....|. ...+...|...++..+++.++.+...
T Consensus 427 g~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~ 476 (489)
T PRK10207 427 AFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMV 476 (489)
T ss_pred HHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998887632100 111110 11256677777766665555554433
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=2.2e-23 Score=199.25 Aligned_cols=371 Identities=13% Similarity=0.051 Sum_probs=237.7
Q ss_pred HHHhhhhhHhhhHh-h--cCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccchhHH
Q psy10432 30 SDWIQGPYVYKVYK-D--YGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSSDFYI 104 (440)
Q Consensus 30 ~~~~~~~~~~~~~~-~--~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~~~~~ 104 (440)
+.....+.++...+ + +|.+..+.+.+.........+..+++|+++|| +|||+++..+.++.+++ .+.+++++++.
T Consensus 25 ~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~ 104 (475)
T TIGR00924 25 SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDL 104 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhH
Confidence 34445666655544 4 89999999998888777777777899999999 89999999999999998 67778888889
Q ss_pred HHHHHHHHHHHHhhhccccchhhhccccccccccchh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHH
Q psy10432 105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEW---LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV 181 (440)
Q Consensus 105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~ 181 (440)
++++|++.|++.+...|...+.+. |++|+++ |++++++.....++|..+||.+++++.+.+|| +..|.+
T Consensus 105 ~~~~~~l~g~g~g~~~~~~~~~~a------~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~--~~~f~~ 176 (475)
T TIGR00924 105 IFYGLGTIAVGSGLFKANPSSMVG------KLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY--HVGFNL 176 (475)
T ss_pred HHHHHHHHHhccccccCCHHHHHH------HhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh--HHHHHH
Confidence 999999999999998888777777 9988764 88899999999999999999999999998899 888877
Q ss_pred HHHHHHHHHHHHHHhccccCC----CCCccCCCCccchhh----------------------------------------
Q psy10432 182 AIPFLLGSTLFIYFCWEEHYD----PKTAKSSLLPNSMFS---------------------------------------- 217 (440)
Q Consensus 182 ~~~~~~~~~~~~~~~~~e~~~----~~~~~~~~~~~~~~~---------------------------------------- 217 (440)
.+...++..+ .+...++..+ ++++.++++.+....
T Consensus 177 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (475)
T TIGR00924 177 AAVGMVIGLL-TFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFF 255 (475)
T ss_pred HHHHHHHHHH-HHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 6654443332 2323232211 111000000000000
Q ss_pred ------hhhhhccCc--chHHHHHHHHHHHhHHHHHHHhhhhhhhc-cC-------CchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 218 ------SLKFLFTNP--CLLTLGIVQSIYEGIMYTFIFVWTPVLEV-LS-------PPLGLVFSCFMISIMIGSKIYSIL 281 (440)
Q Consensus 218 ------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~g~~~~~~~~~~~~~~~~~g~l 281 (440)
......+++ .+..+.+...+.+..+.-..+.++...++ .+ ...+++.+.+.+..++..++..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~ 335 (475)
T TIGR00924 256 RLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMI 335 (475)
T ss_pred HHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHH
Confidence 000000111 11222222223332222221212222111 11 236788888999888888776654
Q ss_pred ----HhhccCCchhH--HHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchh
Q psy10432 282 ----ILKYFKPETML--TLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKA 355 (440)
Q Consensus 282 ----~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 355 (440)
.||..+++... .++.++..+++..+.......... ...+....+....+.+++.....|...++..+..|++.
T Consensus 336 ~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~-~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~ 414 (475)
T TIGR00924 336 WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG-GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL 414 (475)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence 33212223333 556666666655542110000000 00011145667777788888899999999999999999
Q ss_pred hHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 356 RATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 356 ~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
||+.+|+......+|..+++.+. ....+ ..++...|...++.+++..++.+...+
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLA---TFGAV-PQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHhc-ccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988744 22223 445666777777666666555544433
No 85
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=1.9e-23 Score=190.28 Aligned_cols=322 Identities=12% Similarity=0.114 Sum_probs=226.3
Q ss_pred hhhhHhhhHhhcCCChhh-HHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKN-IAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~-~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
.....|.+.+|+|+|+++ .|. .+..+|++.++ +.|+++||+|.|+++..+.+.+++. .+.++++++..+.+.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qI---p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLV---PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHH---HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556667899999999 776 56667777776 9999999999999999999999998 788899999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhH-HHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPF-AVAIPFLL 187 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~-~~~~~~~~ 187 (440)
|++.|++.|... +...++. +++|+++|+++.++..++..+|.+++++++++ ...+||++-... ++......
T Consensus 122 R~llGvaEA~~~-A~~syI~------~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~ 193 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIF------SLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHH
Confidence 999999999996 6666666 99999999999999999999999999999999 556688433222 33333333
Q ss_pred HHHHHHHHhccccCC------CC----------Cc--cCCC--C---c--------cchhhhhhhhccCcchHHHHHHHH
Q psy10432 188 GSTLFIYFCWEEHYD------PK----------TA--KSSL--L---P--------NSMFSSLKFLFTNPCLLTLGIVQS 236 (440)
Q Consensus 188 ~~~~~~~~~~~e~~~------~~----------~~--~~~~--~---~--------~~~~~~~~~~~~~~~~~~~~~~~~ 236 (440)
..++..+++|..++ ++ +. +++. . . +.....++...+||.++...+-..
T Consensus 194 -~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa 272 (511)
T TIGR00806 194 -FSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWV 272 (511)
T ss_pred -HHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHH
Confidence 34444556674332 00 00 0000 0 0 112334556678899888777777
Q ss_pred HHHhHHHHHHHhhhhhhhcc-C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhc
Q psy10432 237 IYEGIMYTFIFVWTPVLEVL-S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS 312 (440)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~-~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (440)
+...+++-..++.+...+.. + ...|..-++..+.+.+.++..|++-.+ +.+..-+.++.....-+.+++ +...
T Consensus 273 ~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~-w~~~~~l~l~v~s~~~~gll~--~m~~ 349 (511)
T TIGR00806 273 FNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIR-WARWSKLLIAVVSAIQAGLVF--WMSQ 349 (511)
T ss_pred HHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCC-chhhHHHHHHHHHHHHHHHhh--hhhc
Confidence 77777776666666555222 1 256777777788888889999998554 433223444443333333222 2222
Q ss_pred cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 313 LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
.+..| ....++.++...+.+..+....-+.+....|.-|.++|++++..-+-..+-..
T Consensus 350 t~~Iw------~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 350 SHDIW------VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred ccchH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 22222 56788888888888888888888888888888899999888877666665554
No 86
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.5e-23 Score=180.39 Aligned_cols=344 Identities=15% Similarity=0.139 Sum_probs=251.8
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchh
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDF 102 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~ 102 (440)
.+....+.+|.+.+.++++..|.+. .+..+|....+ +.|++.||+|+|+.++.|+.+++++ .+. +...++
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~l---pa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y 104 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSL---PAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSY 104 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc---cHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 3556778888888999999999887 45556665555 9999999999999999999999999 444 355788
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Q psy10432 103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI------------ 170 (440)
Q Consensus 103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------------ 170 (440)
..++++-++.|.|.+...++.++++. ...++++..+.+++.+..+++|.++||++++.+..+
T Consensus 105 ~~FL~~lFila~Gi~~LetaaNp~v~------~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~ 178 (422)
T COG0738 105 GFFLVALFILASGIGLLETAANPYVT------LLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQIL 178 (422)
T ss_pred HHHHHHHHHHHhhhHHHHhccchHHH------HhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHH
Confidence 99999999999999999998888888 999999999999999999999999999999998773
Q ss_pred -------cccCchhhHHHHHHHHHHHHHHHH-HhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHH
Q psy10432 171 -------LNLGPIAPFAVAIPFLLGSTLFIY-FCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIM 242 (440)
Q Consensus 171 -------~gw~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (440)
-.| ++++...+....+..+... ...||.++.++++. +.+ .....+++++|+++...+..++.-+..
T Consensus 179 ~~~~~~~~~v--~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~--~~~--~~~~~~l~~~~~~~~gvl~~FlYVG~E 252 (422)
T COG0738 179 AIKGADASSV--QFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG--ASG--SAGLSSLFQNKHLRLGVLAIFLYVGAE 252 (422)
T ss_pred HHHHHHHHhh--hhHHHHHHHHHHHHHHHHHhccCCcCCccccccc--ccc--cchHHHHHhChHHHHHHHHHHHHHhHH
Confidence 125 7777777666654444332 22233332222211 111 115678899999999888888877776
Q ss_pred HHHHHhhhhhhhc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchh
Q psy10432 243 YTFIFVWTPVLEV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRR 318 (440)
Q Consensus 243 ~~~~~~~~~~~~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (440)
....+....+..+ .+ .+.+...+....+.++|+++..++.+| ++++|.+....+...+.++.. .+... .
T Consensus 253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~-~l~~g---~-- 325 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAV-ALIGG---V-- 325 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHH-HHhcC---h--
Confidence 6655533333333 22 677888889999999999999999997 999998877765555544333 22211 1
Q ss_pred hcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHH
Q psy10432 319 VLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVC 398 (440)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (440)
..+....+.++..+..+|...++..+..| +... ..|..-.+...|+++.|.+. |.+.| ..+....+...
T Consensus 326 -----v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~maivGGAiiP~l~---G~i~d-~~g~~~~~~~~ 394 (422)
T COG0738 326 -----VALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGAIIPPLQ---GVIAD-MFGIQLTFLIV 394 (422)
T ss_pred -----HHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeeheecchHHHHHH---HHHHH-hhhhHHHHHHH
Confidence 24555556677799999999999999988 3333 33445555668888999866 88888 77777766644
Q ss_pred HHHHHHHH
Q psy10432 399 TACLLVAL 406 (440)
Q Consensus 399 ~~~~~~~~ 406 (440)
...+.+-+
T Consensus 395 pllc~lyV 402 (422)
T COG0738 395 PLLCYLYV 402 (422)
T ss_pred HHHHHHHH
Confidence 44444433
No 87
>KOG2533|consensus
Probab=99.93 E-value=5.2e-24 Score=199.61 Aligned_cols=341 Identities=14% Similarity=0.133 Sum_probs=237.0
Q ss_pred hhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
..+.+..+.+|.+....+.+. ++.++|+++++ ++|.+.||++-.+.+....+++++- ++....+|++.+++.|
T Consensus 65 ~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~---p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr 141 (495)
T KOG2533|consen 65 VNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQF---PSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALR 141 (495)
T ss_pred hhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHh---hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 333443455777777777665 77777777776 9999999999888888888887776 5666699999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------hcccCchhhHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD------ILNLGPIAPFAVAI 183 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~gw~~~~~~~~~~ 183 (440)
++.|+.++...|....++. .|+.++||++.++++.+..++|.++|++++..+.+ ..|| |+.|++.+
T Consensus 142 ~llGl~es~~wP~~~~~lg------~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW--~~~FiI~G 213 (495)
T KOG2533|consen 142 FLLGLFESGGWPGVVAILG------NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGW--RWLFIIEG 213 (495)
T ss_pred HHHHHHhcccchHHHHHHH------hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCc--eeehhHHH
Confidence 9999999999998888888 99999999999999999999999999999988743 4588 99999999
Q ss_pred HHHHHHHHHHHHhccccCCCCC-----c--------c----CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432 184 PFLLGSTLFIYFCWEEHYDPKT-----A--------K----SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI 246 (440)
Q Consensus 184 ~~~~~~~~~~~~~~~e~~~~~~-----~--------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (440)
++.++..++.++.+|+.|.+.+ + + +....+..+.++++.+++|++|.+.+..++.....+.+.
T Consensus 214 ~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~ 293 (495)
T KOG2533|consen 214 VITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS 293 (495)
T ss_pred HHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH
Confidence 9999888888888998775211 0 0 000011234567888999999999999999988888775
Q ss_pred Hhhhhhh-hc---c-CCchhhHHHHHHHHHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHHHHHhhhccccchhh
Q psy10432 247 FVWTPVL-EV---L-SPPLGLVFSCFMISIMIGSKIYSILILKYFK--PETMLTLTVYLATFSITVSTVLTSSLFDSRRV 319 (440)
Q Consensus 247 ~~~~~~~-~~---~-~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (440)
+ |.|.+ +. + ..+...+..+..++++++.++.|.++|| .+ ..+......................... .
T Consensus 294 ~-~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~-~-- 368 (495)
T KOG2533|consen 294 Y-WLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR-LKTIFARRLLFIVFLCLYAIIGAISLLAAAVL-P-- 368 (495)
T ss_pred H-HHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-h--
Confidence 5 66666 33 2 3677888899999999999999999997 64 2222222222222222221111111111 1
Q ss_pred cchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch-hhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHH
Q psy10432 320 LSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK-ARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVV 397 (440)
Q Consensus 320 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~-~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (440)
.....+.......+...+......++....+ ++-+..+......+.++.++|.++ . ..... .+.+...|..
T Consensus 369 ----~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~-~-~~~ap-~y~~~~~f~~ 440 (495)
T KOG2533|consen 369 ----GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF-R-SLDAP-RYGWGAVFYM 440 (495)
T ss_pred ----HHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc-c-cccCc-chhhhhHHHH
Confidence 1122222222233445556666666665544 444556666666777777777744 2 33344 5566666633
No 88
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.93 E-value=1.3e-22 Score=187.92 Aligned_cols=374 Identities=17% Similarity=0.165 Sum_probs=252.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-hhHHHHHHhHHHHHh-hhh
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-RKLICISYGIVYTLC-CLT 96 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-rr~~l~~~~~~~~~~-~~~ 96 (440)
|....++..++......|+.+...++.|.|.+|+|.+.+++.....+..|++|.++||++ +||.+.+..++.++. ...
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666889997777999999999999999999999998999999999986 577777776766666 456
Q ss_pred cccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCc
Q psy10432 97 KFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFT-AHFFADILNLGP 175 (440)
Q Consensus 97 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~gw~~ 175 (440)
...++++.++...++..+......|..++... +... ++++-.|.....+++|.+++... ++.+....++..
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~------~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~ 157 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIAL------SYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISG 157 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHH------HHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhcccc
Confidence 67788988888888888887777777776666 5543 45667777788888888777554 333444433321
Q ss_pred -hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh
Q psy10432 176 -IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE 254 (440)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (440)
...+++......+... ..+.+|+.+++++.+++ .++...++..+++|||+++...+..++.......+.++...+++
T Consensus 158 ~~~~~~i~~~~~~ll~~-~~l~lp~~~~~~~~~~~-~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~ 235 (400)
T PF03825_consen 158 TSLIFYIAAILSLLLAG-FALFLPKTPPKRSAKES-VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQ 235 (400)
T ss_pred ccHHHHHHHHHHHHHHH-HHHhCCCCccccccCCC-cccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344444443332222 23356776633332221 11222233457899999998888877777666666554555554
Q ss_pred ccC----CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHH
Q psy10432 255 VLS----PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFL 330 (440)
Q Consensus 255 ~~~----~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (440)
+.+ ...+..++...++.++.-...+++.+| ++.++.+.++.+..++=..+. .....+...... ....+..
T Consensus 236 ~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~-a~~~~~~~~~~~----~~~l~q~ 309 (400)
T PF03825_consen 236 ELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLY-AYFSDPWPFIVA----LQLLGQL 309 (400)
T ss_pred HcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH-HHhcCCcHHHHH----HHHHHHh
Confidence 433 556777888889999999999999997 999999999888877766544 222111100111 1222233
Q ss_pred HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhh-hhhHHHHHHHHhhccccccCccchhhH------HHHHHHHHHH
Q psy10432 331 IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP-TNFITCFTLIFIKNEDAEGGKLIAIHS------VFVVCTACLL 403 (440)
Q Consensus 331 ~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 403 (440)
+.+..++........++++.+|++.|+++.++++.. ..+|..+|.. .+ |.+.| ..+.+. .+.+++++.+
T Consensus 310 lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~--ig-G~l~~-~~g~~~~~~~~~~~~v~a~~~~ 385 (400)
T PF03825_consen 310 LHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSL--IG-GWLYD-AFGARGMFDWSAVFLVFAVMAL 385 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHH--HH-HHHHH-HhcchhhhhHHHHHHHHHHHHH
Confidence 566778888888999999999999999999998875 5688888888 45 77777 555443 4444554444
Q ss_pred HHHHHHHHh
Q psy10432 404 VALLASCVF 412 (440)
Q Consensus 404 ~~~~~~~~~ 412 (440)
+..++....
T Consensus 386 ~~~~~f~~~ 394 (400)
T PF03825_consen 386 VILVLFVIL 394 (400)
T ss_pred HHHHHHHhh
Confidence 444444333
No 89
>KOG2504|consensus
Probab=99.93 E-value=2.1e-23 Score=197.68 Aligned_cols=357 Identities=14% Similarity=0.130 Sum_probs=265.4
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHH-HHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLY-GRLF 111 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~-~r~l 111 (440)
.+.+.+.+.++++.+.++++|+.++......+.+|+.+.+.||+|.|++.+.|.++.+++ .+..+++++|++++ .-++
T Consensus 65 ~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi 144 (509)
T KOG2504|consen 65 FGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVI 144 (509)
T ss_pred ehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 445566777999999999999999999999999999999999999999999999999999 78999999998865 5688
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
.|+|.++.+......+. .++ +++|+.+.|+...+.++|.++-|.+...+.+.+|| |..+++...+.+-...
T Consensus 145 ~G~G~~~~~~paiviv~------~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~--r~~~l~~~~~~l~~~~ 215 (509)
T KOG2504|consen 145 GGLGLGLIYLPAVVILG------TYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW--RGALLIFGGISLNVLV 215 (509)
T ss_pred hhccchhhhcchhhhhh------hHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHH
Confidence 99999998665444443 555 78999999999999999999999999999999999 7777766666654444
Q ss_pred HHHHhccccCCC----------------------------CCcc-C-------------CCCcc--chhhhh----hhhc
Q psy10432 192 FIYFCWEEHYDP----------------------------KTAK-S-------------SLLPN--SMFSSL----KFLF 223 (440)
Q Consensus 192 ~~~~~~~e~~~~----------------------------~~~~-~-------------~~~~~--~~~~~~----~~~~ 223 (440)
.....-|..++. ++.. . +.+.+ ..+... .+++
T Consensus 216 ~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll 295 (509)
T KOG2504|consen 216 AGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLL 295 (509)
T ss_pred HHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHH
Confidence 444444411110 0000 0 00000 111222 4778
Q ss_pred cCcchHHHHHHHHHHHhHHHHHHHhhhhhhhcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchh--HHHHHHH
Q psy10432 224 TNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETM--LTLTVYL 298 (440)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~ 298 (440)
++|.++.+.+...+...+.+......+++.+.. ..+.+.+.+..++..++++++.|++.|+ ...++. ...+.+.
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~ 374 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLI 374 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHH
Confidence 899999988888888888877666555555433 3788899999999999999999999997 553333 3333333
Q ss_pred HHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 299 ATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
..++.... ....+ + . .......+++++.|.........+.+.++.++-..++|+...+..++..++|.+.
T Consensus 375 ~gl~~~~~---p~~~~--~-~----~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 375 AGLARLFL---PFATT--Y-V----GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred HHHHHHHH---HHhcc--H-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccc
Confidence 33333111 11111 1 1 3444445677778888888888899999999999999999999999999999944
Q ss_pred hccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 379 KNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
|.+.|...+|...|..++++.+++..+....+
T Consensus 445 ---g~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 445 ---GLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ---eeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 77778455599999999999998887766655
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.7e-22 Score=173.85 Aligned_cols=351 Identities=13% Similarity=0.098 Sum_probs=259.9
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
-+..+|.++++.+|+|+|.+..|.+.++..+...+++|+..+++.|+|.++.+..++++.+++ .+-... +.+.++.+-
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt 106 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGT 106 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHH
Confidence 345789999999999999999999999999999999999999999999999999999999999 444444 788899999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~ 188 (440)
.+.|.|.+.... ....++++.+| ++-+..+|++....++|..+++.+.-.+.++. || +.....-+...++
T Consensus 107 ~l~G~gIav~nV------LLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW--~~aL~~WAl~all 177 (395)
T COG2807 107 LLAGAGIAVINV------LLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGW--RGALGFWALLALL 177 (395)
T ss_pred HHHHhhHHHHHH------hhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccH--HHHHHHHHHHHHH
Confidence 999999999844 44455558875 57899999999999999999999999999887 68 5554444444332
Q ss_pred HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHH
Q psy10432 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFS 265 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~ 265 (440)
. ++. ++|...+++..+. +....+...++|||..|.+.+...+....+|..+...++++.+.| .+.|.+.+
T Consensus 178 A-l~~--WlPq~~r~~~~~~----~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~lls 250 (395)
T COG2807 178 A-LLI--WLPQALREQAASI----ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLS 250 (395)
T ss_pred H-HHH--Hhhhccccccccc----ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHH
Confidence 2 222 3455322211110 111123346899999999999999999999988775566664444 88899999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHh
Q psy10432 266 CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGY 345 (440)
Q Consensus 266 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 345 (440)
...+..+..++....+.+|+.++|........++.++.+++.+. +... ...+ ..+.+.+.|..+|....
T Consensus 251 l~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~---P~~~-------~~lw-~~llG~G~G~~F~laL~ 319 (395)
T COG2807 251 LMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA---PGQL-------PILW-ALLLGLGQGGAFPLALT 319 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---hhhH-------HHHH-HHHHhCccchHHHHHHH
Confidence 99999999999999999973445555566666666666666221 1111 1222 34556667788886666
Q ss_pred HhccCC-cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 346 LRGRII-PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 346 ~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
++.+.. ++++.++..|+.+..+++-...||.++ |.+.|...+|+..+.......+...+.-+..
T Consensus 320 li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~---G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 320 LILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLF---GFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhH---hHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 665554 456778889999999999999999976 7788866677777777766665555444433
No 91
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=3.2e-22 Score=192.29 Aligned_cols=366 Identities=14% Similarity=0.071 Sum_probs=223.1
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccc-hhHHHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSS-DFYILLYGR 109 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~-~~~~l~~~r 109 (440)
..++++... +++|.+.++.++.+...........+++|+++|| +|||+.++.+.++.+++ .++++++ +.+.++++|
T Consensus 40 ~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~ 119 (500)
T PRK09584 40 LQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGM 119 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 444443333 7899999888776655444444444689999999 59999999999999988 6666664 566777889
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEW--LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
+++|++.|...|...+.+. |++|+++ |..++++.+.+.++|..+||.+++++.+++|| ++.|.+..+...
T Consensus 120 ~l~gig~g~~~~~~~~l~~------~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~--~~~F~i~~i~~~ 191 (500)
T PRK09584 120 ATIAVGNGLFKANPSSLLS------TCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGW--SVAFALSVVGML 191 (500)
T ss_pred HHHHHhhhcccCCHHHHHH------HhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHH
Confidence 9999999998787777777 9987653 45688999999999999999999999999999 888877665433
Q ss_pred HHHH---HHHHhccccCCCCCccCCCCccch----------------------------------------hhh--hhhh
Q psy10432 188 GSTL---FIYFCWEEHYDPKTAKSSLLPNSM----------------------------------------FSS--LKFL 222 (440)
Q Consensus 188 ~~~~---~~~~~~~e~~~~~~~~~~~~~~~~----------------------------------------~~~--~~~~ 222 (440)
+..+ .....++|..+++++++ .+.... .+. .++.
T Consensus 192 i~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (500)
T PRK09584 192 ITVVNFAFCQRWVKQYGSKPDFEP-INYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGA 270 (500)
T ss_pred HHHHHHHHhHHHhccCCCCCCccc-cchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 3222 22333444321111100 000000 000 0001
Q ss_pred ccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh----c-c-----C--CchhhHHHHHHHHHHHHHHHHHHHHhh---ccC
Q psy10432 223 FTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE----V-L-----S--PPLGLVFSCFMISIMIGSKIYSILILK---YFK 287 (440)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----~--~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~ 287 (440)
-+ ++.+.... .++....++......+..+. . . + ...+.+.+...+..++..++.+++.+| |.+
T Consensus 271 ~~-~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~ 348 (500)
T PRK09584 271 AR-RKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLP 348 (500)
T ss_pred HH-HHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCC
Confidence 11 12222111 11222222222232333321 1 1 1 236677777887777777776544443 155
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhh
Q psy10432 288 PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367 (440)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 367 (440)
..+.+.+++.+.+++++.+.......+..... .....+....+.+++.+...|...+++.+..|++.||+++|......
T Consensus 349 ~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~v-s~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~ 427 (500)
T PRK09584 349 MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIV-SVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTT 427 (500)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 56677788888888776652221111100000 00135566667778888899999999999999999999999888777
Q ss_pred hhHHHHHHHHhhc---cccccCc---cchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 368 NFITCFTLIFIKN---EDAEGGK---LIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 368 ~~g~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
.+|..++..+... +....+. ..++...|...++..++..++.+.
T Consensus 428 a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 428 AGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666553310 0111111 123677887777666544444333
No 92
>KOG0569|consensus
Probab=99.92 E-value=6.7e-23 Score=189.50 Aligned_cols=351 Identities=16% Similarity=0.179 Sum_probs=230.8
Q ss_pred hhcC--CChhhHHH-------HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhcccchhHHHHHHH
Q psy10432 43 KDYG--YDEKNIAL-------LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFSSDFYILLYGR 109 (440)
Q Consensus 43 ~~~g--~s~~~~~~-------~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~~~~~~l~~~r 109 (440)
+.+| .++++... ++.+|.+++.+ ..|.++||+|||..+.++.++..++ + .+...+++++++++|
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~---~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR 123 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSF---SSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGR 123 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 5566 44444443 45555555555 9999999999999999988887776 3 345568899999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH--HHhhcccCchhhHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHF--FADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--l~~~~gw~~~~~~~~~~~~~~ 187 (440)
++.|+..+.......-++. |..|++.||..-...+.+..+|..+|..++.- +-+.-.| .+.+....+..+
T Consensus 124 ~i~Gl~~gl~~~~~pmyl~------E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W--~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 124 LIVGLACGLSTGLVPMYLT------EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLW--PYLLAFPLIPAL 195 (485)
T ss_pred HHHHHHhHHHHHHHHHHHh------hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcch--HHHHHHHHHHHH
Confidence 9999999998665555666 99999999999999999999999999776632 2223346 555555555544
Q ss_pred HHHHHHHHhccccCCC-----CCcc------------C--CC-------------CccchhhhhhhhccCcchHHHHHHH
Q psy10432 188 GSTLFIYFCWEEHYDP-----KTAK------------S--SL-------------LPNSMFSSLKFLFTNPCLLTLGIVQ 235 (440)
Q Consensus 188 ~~~~~~~~~~~e~~~~-----~~~~------------~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (440)
+. ++...++||+|+- ++++ + +. ..++...+++++++||..+.-....
T Consensus 196 ~~-l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~ 274 (485)
T KOG0569|consen 196 LQ-LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIG 274 (485)
T ss_pred HH-HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHH
Confidence 43 3445678999860 0000 0 00 0000122466788887766632222
Q ss_pred HH-----HHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH
Q psy10432 236 SI-----YEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVST 307 (440)
Q Consensus 236 ~~-----~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 307 (440)
.. ...+.+....+...++...| .++-+.....++...+.++++.++.|| .|||+.+..+..++.+..+.+.
T Consensus 275 ~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 275 IVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHH
Confidence 11 22222223233334444444 556777888889999999999999997 9999999999988888776663
Q ss_pred Hhhhcccc--chhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccc
Q psy10432 308 VLTSSLFD--SRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAE 384 (440)
Q Consensus 308 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~ 384 (440)
......+. .|.. -..+....++.+.++. ..|..+-+.+|.+|++.|.++.++...+..+...+....+ -.+
T Consensus 354 ~~~~l~~~~~~~~~---y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~f---p~l 427 (485)
T KOG0569|consen 354 IALFLSNSFGSWLS---YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAF---PPL 427 (485)
T ss_pred HHHHHHHHhhhHHH---HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 33221111 1211 0123344445555555 4788999999999999999999999999988888777654 223
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHH-Hhhh
Q psy10432 385 GGKLIAIHSVFVVCTACLLVALLASC-VFKR 414 (440)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 414 (440)
.+ ..|. ..|+...+.+.+..+..+ .+++
T Consensus 428 ~~-~~g~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 428 QN-VIGP-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred HH-Hhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 34 4453 566666665555555444 3444
No 93
>KOG2615|consensus
Probab=99.92 E-value=7.9e-24 Score=183.64 Aligned_cols=327 Identities=16% Similarity=0.145 Sum_probs=205.5
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccc
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLN 133 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 133 (440)
+-+...+...+.+|.+|.++||+|||++++.|+...++. .+.+.+.|+..+.++|++.|+..+.. .. .++++
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v------~rAii 145 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SV------IRAII 145 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HH------HHHHH
Confidence 333333444444589999999999999999999999999 79999999977777899999999886 33 45555
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hcccCchhhHHH----HHHHHHHHHHHHHHhccccCCCCCc
Q psy10432 134 YYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD---ILNLGPIAPFAV----AIPFLLGSTLFIYFCWEEHYDPKTA 206 (440)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~gw~~~~~~~~----~~~~~~~~~~~~~~~~~e~~~~~~~ 206 (440)
+|.+++|+|+++++..+...++|.++||.+||++.+ ..| ..+|.. ..+....-.....+++||+-+.+++
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g---~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG---SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc---cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 599999999999999999999999999999999988 222 223322 2222222123345578998665444
Q ss_pred cCCCC-ccchhh------h-----hhhhccCcchHHHHHHH------HHHHhHHHHHHHhhhhhh--hc---cCCchhhH
Q psy10432 207 KSSLL-PNSMFS------S-----LKFLFTNPCLLTLGIVQ------SIYEGIMYTFIFVWTPVL--EV---LSPPLGLV 263 (440)
Q Consensus 207 ~~~~~-~~~~~~------~-----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~---~~~~~g~~ 263 (440)
.++.. ..+..+ . .-...||+......... -+.+...+.......+.+ +. ...+.|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v 302 (451)
T KOG2615|consen 223 NDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV 302 (451)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence 31111 000000 0 11234454433311111 111222222222233333 22 22778888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhh
Q psy10432 264 FSCFMISIMIGSKIYSILILKYFK--PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP 341 (440)
Q Consensus 264 ~~~~~~~~~~~~~~~g~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 341 (440)
++..++.+.+.+....+..+| .+ .+..+.....++.-..+.+ . ....+ . ....+..+..++.....+
T Consensus 303 l~~tGl~m~~~ql~~~~~l~~-~~~~~~a~l~~~l~~~vP~~lll-s---~~~~~--~----~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 303 LSTTGLLMLVIQLALVPILPR-YKGNIKAVLLFSLLLIVPAFLLL-S---LARTP--V----VLYLGSTLKSFSTASVVT 371 (451)
T ss_pred eehhhHHHHHHHHhccccccc-cccchhhHHHHHHHHHHHHHHHH-h---ccccc--h----hhhHHHHHHHHHHHHhhH
Confidence 888888888777777777775 33 2223333333332222222 1 11111 1 345555666677777889
Q ss_pred hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432 342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA 405 (440)
Q Consensus 342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (440)
....++.+..|+++||+++|+.+..+.++.++||. .+ |....+..+-+..+...+.+.+.+
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPl--v~-g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPL--VS-GVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhh--hh-heeEEEecCCCceeeehHHHHHHH
Confidence 99999999999999999999999999999999999 34 555443333344444444444444
No 94
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.92 E-value=5.5e-22 Score=190.40 Aligned_cols=338 Identities=12% Similarity=0.072 Sum_probs=218.1
Q ss_pred HHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHH-HHHHhHHHHHh-hhhccc
Q psy10432 27 ATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLI-CISYGIVYTLC-CLTKFS 99 (440)
Q Consensus 27 ~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~-l~~~~~~~~~~-~~~~~~ 99 (440)
..+...+..++++..+ +.+|+++.++|.++.+..+...+..|+.|.++| |+||||. ++.+....+++ .++...
T Consensus 18 ~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~ 97 (473)
T PRK10429 18 KDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA 97 (473)
T ss_pred HhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC
Confidence 3344555667775666 557999999999999999999999999999999 6698554 55677777776 443332
Q ss_pred ch------hHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10432 100 SD------FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN 172 (440)
Q Consensus 100 ~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 172 (440)
++ +..+++..++.+++.........++.. |.. +++||.+..++...+.++|..+.+.+...+.+.+|
T Consensus 98 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~------~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 98 HLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVP------TLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhH------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 21 334556667778888777665555665 888 68899999999888888876666665554433332
Q ss_pred c-----CchhhHHHHHHHHHHHHHHHHHhccccCCCCCc-cCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432 173 L-----GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA-KSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI 246 (440)
Q Consensus 173 w-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (440)
. .++....+.+++..+..+..++..||++++++. ++++++.+.++.++.+++||.++......++.........
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~ 251 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIIN 251 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 1 014344444444444444445556776432211 1111234567778888899988887777666665554443
Q ss_pred Hhhhhhh-hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcch
Q psy10432 247 FVWTPVL-EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLST 322 (440)
Q Consensus 247 ~~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (440)
. ..+++ +.. ....+.......++.+++.++.+++.|| +|+|+.+..+..+..++.+.+............
T Consensus 252 ~-~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 325 (473)
T PRK10429 252 G-FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL---- 325 (473)
T ss_pred h-heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH----
Confidence 3 33344 222 1345556666678889999999999997 999999887776655554443221111111111
Q ss_pred hHHHHHHHHHHHhhhchhhhHHhHhccCCc-------chhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432 323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIP-------EKARATITNWLRVPTNFITCFTLIF 377 (440)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~ 377 (440)
..++...+.+++.+...+...+++.|..| .+..|..+|...+...++..+++.+
T Consensus 326 -~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 326 -LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 23333344556677777777888888865 3345668999999999988888764
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=1.6e-21 Score=185.98 Aligned_cols=323 Identities=12% Similarity=0.083 Sum_probs=210.6
Q ss_pred hhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc----cchhHH-HHHHhHHHHHh-hhhcccch----
Q psy10432 33 IQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK----FGRKLI-CISYGIVYTLC-CLTKFSSD---- 101 (440)
Q Consensus 33 ~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~-l~~~~~~~~~~-~~~~~~~~---- 101 (440)
....+++..+ +++|+|+.++|.++.+..+...+..|+.|.++|| +||||. ++.+.+..+++ .+....++
T Consensus 27 ~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~ 106 (444)
T PRK09669 27 TVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGAT 106 (444)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3445554555 7799999999999999999999999999999998 787555 55566666665 33333332
Q ss_pred --hHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------
Q psy10432 102 --FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL------- 171 (440)
Q Consensus 102 --~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------- 171 (440)
+..+++..++.+.+.........++.. |+. +++||.+..++......+|..+++.+...+...+
T Consensus 107 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~------~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~ 180 (444)
T PRK09669 107 GKIIYACVTYILLSLVYTAINVPYCAMPG------AITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQK 180 (444)
T ss_pred hHHHHHHHHHHHHHHHHHhhcchHHHhHH------HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 455566666777776666554445555 877 5678999999999888888888877665554433
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432 172 NLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP 251 (440)
Q Consensus 172 gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (440)
+| +..+.+.+++..+..+..++..+|++++++ + ++.+.++.++.++|||.++.......+......... ...+
T Consensus 181 g~--~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~-~---~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~-~~~~ 253 (444)
T PRK09669 181 GY--FYAMMVMGLLGVVLFFCCFFMTKERYTPEV-D---NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRG-GATL 253 (444)
T ss_pred hH--HHHHHHHHHHHHHHHHHHhCCeEEecCCCC-c---CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh-hhhh
Confidence 34 555555555555444444555566533221 1 223456778889999998887666555444443222 2333
Q ss_pred hh-hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 252 VL-EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 252 ~~-~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
++ +.. +...+.......+..+++.++.+++.|| +++|+....+.....+....+... .++..+ ...+
T Consensus 254 y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~ 324 (444)
T PRK09669 254 YYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFI--PPSNVW------LIFA 324 (444)
T ss_pred eeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHh--CcchHH------HHHH
Confidence 33 211 1233445555567778888999999998 999998887766555433322121 111111 2344
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcc-------hhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPE-------KARATITNWLRVPTNFITCFTLIF 377 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~~~~~ 377 (440)
...+.+++.+...+..++++.|..+. +..|..+|..+....+|..+++.+
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i 381 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV 381 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 44566677788888888999888752 245677888888888888888764
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=3.1e-20 Score=174.06 Aligned_cols=379 Identities=12% Similarity=0.062 Sum_probs=249.2
Q ss_pred HHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHHHHHH-hHHHHHh-hhhccc
Q psy10432 26 LATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLICISY-GIVYTLC-CLTKFS 99 (440)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~-~~~~~~ 99 (440)
...++..+..++++++.+++|.+..+.+.+..++.+.+.+.+|+.|+++| |+||||.++.+ .....++ .+..++
T Consensus 15 Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~ 94 (477)
T TIGR01301 15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 33344666777887878999999999999999999999999999999999 59999998775 5555555 456665
Q ss_pred chhH-----------------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhh--hHHHHHHHHHHHHHHHHH
Q psy10432 100 SDFY-----------------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL--NLTFARATFGSGLFAIVS 160 (440)
Q Consensus 100 ~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g 160 (440)
++.+ .++++-.+..++.....+...+++. |.+|+++| +.++++.+...++|.++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALia------Dl~p~~~~~~~~a~~~~~~~~~lG~ilg 168 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLA------DLTGGDARRTRIANAYFSFFMAIGNVLG 168 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5542 2233333444566666554444545 99999865 579999999999999999
Q ss_pred HHHHHHH--Hhhcc-----------cCchhhHHHHHHHHHHHHHHHHHhccccCCCCCcc------CCCCc----cchhh
Q psy10432 161 GFTAHFF--ADILN-----------LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAK------SSLLP----NSMFS 217 (440)
Q Consensus 161 ~~~~~~l--~~~~g-----------w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~------~~~~~----~~~~~ 217 (440)
+.+++.. .+.++ .+.+..|++.++..++..++..+..||.+..++++ ++.+. +..++
T Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (477)
T TIGR01301 169 YAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGE 248 (477)
T ss_pred HHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHH
Confidence 9999875 23221 23477888888888888888888889875421110 00011 11122
Q ss_pred hhhhhccC-cchHHHHHHHHHHHhHHHHHHHhhhhhhh--ccC---------Cc----hhhHHHHHHHHHHHHHHHHHHH
Q psy10432 218 SLKFLFTN-PCLLTLGIVQSIYEGIMYTFIFVWTPVLE--VLS---------PP----LGLVFSCFMISIMIGSKIYSIL 281 (440)
Q Consensus 218 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~----~g~~~~~~~~~~~~~~~~~g~l 281 (440)
-++.+.+- |.++.+++.+++.+.+.+.+..+.++.++ .++ ++ ..+....+.+...+.+++..++
T Consensus 249 i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l 328 (477)
T TIGR01301 249 LFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKL 328 (477)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333333 45677899999999999888776666652 221 01 2234455556666777888899
Q ss_pred HhhccCC-chhHHHHHHHHHHHHHHHHHhhhccc---c-----chhhcc---hhHHHHHHHHHHHhhhchhhhHHhHhcc
Q psy10432 282 ILKYFKP-ETMLTLTVYLATFSITVSTVLTSSLF---D-----SRRVLS---TNLCFVAFLIYEISVGMYCPVTGYLRGR 349 (440)
Q Consensus 282 ~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 349 (440)
.+| +++ |+....+.++.++++..........+ . ....|. ....+..+...++.....+...++++++
T Consensus 329 ~~~-~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~ 407 (477)
T TIGR01301 329 CRG-WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASI 407 (477)
T ss_pred HHH-hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHH
Confidence 997 985 55557777777776665533321100 0 000000 0134555556666777788888899999
Q ss_pred CCcc--hhhHHHHHHhhhhhhhHHHHHHHHhhccccccCc-cchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 350 IIPE--KARATITNWLRVPTNFITCFTLIFIKNEDAEGGK-LIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 350 ~~p~--~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
..|+ +..|..+|+.|.+..+...+..... |...+. ..+....+.+.++..+++.+..+....
T Consensus 408 ~~~~~~~~~G~~mgilN~~I~lpQii~sl~~---g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 408 RSSNLGAGQGLSMGVLNLAIVIPQIIVSLGS---GPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred HccccCCCCcchhhHHHHHHHHHHHHHHHHH---HHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 9885 4669999999999988888777632 222110 113466778888888887777665433
No 97
>KOG0254|consensus
Probab=99.89 E-value=3.9e-21 Score=186.20 Aligned_cols=310 Identities=12% Similarity=0.086 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhcc
Q psy10432 52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNE 130 (440)
Q Consensus 52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 130 (440)
.+++.+.-.+...+.+++.|+++|++|||+.++++.+.+.++ +++++++|+++++++|+++|+|.|........++.
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s-- 168 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS-- 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh--
Confidence 356555555555555569999999999999999999999999 89999999999999999999999999654444444
Q ss_pred ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCc---
Q psy10432 131 HLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA--- 206 (440)
Q Consensus 131 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~--- 206 (440)
|..|++.||...+..+....+|..++..++....+. .+| |..+.+..+..++..+. .++.||+|+.--+
T Consensus 169 ----Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~W--r~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~ 241 (513)
T KOG0254|consen 169 ----EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGW--RIPLGLALIPAVILALG-MLFLPESPRWLIEKGR 241 (513)
T ss_pred ----hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccH--HHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCC
Confidence 999999999999999999999999996555554433 356 88888877777766666 7788998751000
Q ss_pred ------------c-CCCCccchhh-----------------hhhhhccCcchHH-----HHHHHHHHHhHHHHHHHhhhh
Q psy10432 207 ------------K-SSLLPNSMFS-----------------SLKFLFTNPCLLT-----LGIVQSIYEGIMYTFIFVWTP 251 (440)
Q Consensus 207 ------------~-~~~~~~~~~~-----------------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 251 (440)
. ++.+.+...+ .++.+++ |.... ..+..+....+......+.+.
T Consensus 242 ~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~ 320 (513)
T KOG0254|consen 242 LEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTT 320 (513)
T ss_pred hHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHH
Confidence 0 0000000000 0122222 22222 222222222222222233333
Q ss_pred hhhccCCc-h-hhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcccc------chhhcchh
Q psy10432 252 VLEVLSPP-L-GLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFD------SRRVLSTN 323 (440)
Q Consensus 252 ~~~~~~~~-~-g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 323 (440)
+++..+.. . .......++...++..+...+.|| .|||+.+..+...+.++.+.+......... ....
T Consensus 321 if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~---- 395 (513)
T KOG0254|consen 321 IFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGW---- 395 (513)
T ss_pred HHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhH----
Confidence 44444422 2 455566667778888888999998 999999999999988888766433222111 1111
Q ss_pred HHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 324 LCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 324 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
..+...+++...+.. ..|..+.+..|.+|.+.|+++.++..........+-..
T Consensus 396 ~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254|consen 396 LAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence 223333333333333 45677788899999999999999999888887766654
No 98
>PRK09848 glucuronide transporter; Provisional
Probab=99.89 E-value=3.2e-20 Score=177.43 Aligned_cols=329 Identities=11% Similarity=-0.007 Sum_probs=200.7
Q ss_pred HHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccccc----chhHHH-HHHhHHHHHh-h-hhc--
Q psy10432 28 TFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF----GRKLIC-ISYGIVYTLC-C-LTK-- 97 (440)
Q Consensus 28 ~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~----Grr~~l-~~~~~~~~~~-~-~~~-- 97 (440)
.....+..++++..+ +.+|+++.++|.+..+..+...+..|+.|+++||. ||||.. ..+.+...+. . +..
T Consensus 21 ~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 100 (448)
T PRK09848 21 NFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVP 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCc
Confidence 333444556664444 56799999999999999999999999999999986 777765 4455544433 2 221
Q ss_pred --ccc--hhHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHH-----HHHHHHHHHHHHH
Q psy10432 98 --FSS--DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSG-----LFAIVSGFTAHFF 167 (440)
Q Consensus 98 --~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~-----~g~~~g~~~~~~l 167 (440)
..+ .....+....+.+++.+...+...++.. +.. ++++|.+..+....+.+ ++..++|.+++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 101 TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLAT------AMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhh------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111 2233455566778888888765555544 444 44678887776655433 4455556555432
Q ss_pred HhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432 168 ADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF 247 (440)
Q Consensus 168 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (440)
.+....++.....+..++..+..+......||++++++ ++.+..+.++.++|||.++...+..++..........
T Consensus 175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~-----~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~ 249 (448)
T PRK09848 175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIV-----AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSA 249 (448)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCc-----cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh
Confidence 11101000111122222222222333334566543221 1124556788899999998887777777666655543
Q ss_pred hhhhhh-h-ccC--Cchh-hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcch
Q psy10432 248 VWTPVL-E-VLS--PPLG-LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLST 322 (440)
Q Consensus 248 ~~~~~~-~-~~~--~~~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (440)
..|++ + ..+ ...+ +......++.+++.++.+++.|| +++++.+..+..+..++.+.+ .+. +.... +
T Consensus 250 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~-~~~--~~~~~-~--- 320 (448)
T PRK09848 250 -SSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLF-FWV--SVWSL-P--- 320 (448)
T ss_pred -hheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHc--CchhH-H---
Confidence 44544 2 222 2223 33333456678889999999997 999999988887777766544 221 11111 1
Q ss_pred hHHHHHHHHHHHhhhchhhhHHhHhccCCcch-------hhHHHHHHhhhhhhhHHHHHHHH
Q psy10432 323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK-------ARATITNWLRVPTNFITCFTLIF 377 (440)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~~~~ 377 (440)
.......+.+++.+...+...++..+..|.+ .+|..+|+.+....+|..+++.+
T Consensus 321 -~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 321 -VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 2333444566677777888888888877644 45899999999999999888764
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.89 E-value=6.6e-21 Score=172.97 Aligned_cols=370 Identities=13% Similarity=0.072 Sum_probs=230.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHH--HHh-h
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVY--TLC-C 94 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~--~~~-~ 94 (440)
+.-..++..++..+...|+.+.-.++ .|+|.+++|.+++++.+...+.+|+.|.++||+|.||-++...... ..+ .
T Consensus 11 ~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pf 90 (412)
T PF01306_consen 11 WLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPF 90 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 34445555566666788888555554 8999999999999999999999999999999999766654433222 223 2
Q ss_pred -hhccc----chhH-HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 95 -LTKFS----SDFY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 95 -~~~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
...+. .|++ ..+++-+..|+......|..+++.- +.. ++.+.-.|-..+.+++|.+++..++|.+.
T Consensus 91 f~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~e------r~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 91 FIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAE------RVS--RRNGFEYGRARMWGSIGFAIASLLAGILF 162 (412)
T ss_dssp HHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHH------HHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHH------HHH--HHhcCCcchHHHHhhHHHHHHHHHhheee
Confidence 22222 2222 2222223333333333344333332 221 34455678889999999999999999998
Q ss_pred hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC---CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHH
Q psy10432 169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS---SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTF 245 (440)
Q Consensus 169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (440)
+..+ ...|++.....++..++..+..|+.+++.+..+ +++.+...++..+++|+|++|.+.+........+..+
T Consensus 163 ~i~p---~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vf 239 (412)
T PF01306_consen 163 NINP---NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVF 239 (412)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCc---cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 7622 466666554444444443333334332211111 1111112345668899999999777666555555554
Q ss_pred HHhhhhhh----hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchh
Q psy10432 246 IFVWTPVL----EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRR 318 (440)
Q Consensus 246 ~~~~~~~~----~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (440)
-..++.++ +. .....|.+.+...+..++.-.+.+++.+| +|.|+.+.++..++.+=..+. .+. +..+
T Consensus 240 dqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~-~~~---~~~~- 313 (412)
T PF01306_consen 240 DQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGS-GFA---TNPW- 313 (412)
T ss_dssp HHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHH-HT-----SHH-
T ss_pred HHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHH-hhh---cchH-
Confidence 33333333 11 12568899999999999999999999998 999999999888877766554 211 1111
Q ss_pred hcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHh-hhhhhhHHHHHHHHhhccccccCccchhhHHHHH
Q psy10432 319 VLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWL-RVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVV 397 (440)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (440)
.....-.+.+.-.++......-++++.+|++..++...+. +...+++..+.+... |...| ..|++.+|.+
T Consensus 314 -----~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~---G~lyd-~~G~~~tyli 384 (412)
T PF01306_consen 314 -----VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLA---GYLYD-RIGFQHTYLI 384 (412)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHH---HHHHH-HHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhH---HhhHh-hcCcHHHHHH
Confidence 2233333444445555556777888889999999998884 688888888888844 88889 8999999988
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy10432 398 CTACLLVALLASCVFKR 414 (440)
Q Consensus 398 ~~~~~~~~~~~~~~~~~ 414 (440)
.+.+.+...++.....+
T Consensus 385 mg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 385 MGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHheeeec
Confidence 88877776666655544
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.89 E-value=1.4e-20 Score=178.62 Aligned_cols=327 Identities=15% Similarity=0.132 Sum_probs=234.6
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHHH-HHHhHHHHHh-hhhccc-c-----
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLIC-ISYGIVYTLC-CLTKFS-S----- 100 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l-~~~~~~~~~~-~~~~~~-~----- 100 (440)
...++...+ +.+|+++..+|.+..++.+...+..|+.|.++| |+||||.. +.+....+++ .++... +
T Consensus 20 ~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~ 99 (428)
T PF13347_consen 20 LSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSF 99 (428)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhh
Confidence 334444555 567999999999999999999999999999999 89988775 4577888887 444434 3
Q ss_pred --hhHHHHHHHHHHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----
Q psy10432 101 --DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL---- 173 (440)
Q Consensus 101 --~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw---- 173 (440)
....+.+..++..++.........++.. |..+ ++||.+..+..+.+..+|.++...+.+.+.+.++-
T Consensus 100 ~~~~~~~~~~~~l~~~~~t~~~i~~~al~~------~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~ 173 (428)
T PF13347_consen 100 TAKLVWLFVFYILFDIAYTFVQIPYNALIP------ELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTS 173 (428)
T ss_pred hhHHHHHHHHHHHHHHhhhhccCchhhcCc------cccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccc
Confidence 2234566677778888887554444444 9987 56899999999999999988777777776655442
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432 174 -GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV 252 (440)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (440)
+++....+.+++..+..+...+..||++++.+++ +++.+.++.++.+++||.++.......+.......... ..++
T Consensus 174 ~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~--~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~-~~~y 250 (428)
T PF13347_consen 174 NGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ--EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNT-FLPY 250 (428)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhheeeecccccccc--ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhh-HHHH
Confidence 2366667777776666666677778832222221 24445677889999999999888777776666554433 2333
Q ss_pred h-hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432 253 L-EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 253 ~-~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
+ +. .+...+.......++.+++.++.+++.|| +|+|+....+..+.+++.+.+... .. ...+ ..++.
T Consensus 251 ~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~-~~-~~~~------~~~i~ 321 (428)
T PF13347_consen 251 YFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAALGFLLLFFL-GP-GSPW------LVLIL 321 (428)
T ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHHHHHHHHHH-Hh-hhHH------HHHHH
Confidence 3 11 12456677778888999999999999998 999999999988888877665222 11 1112 35556
Q ss_pred HHHHHHhhhchhhhHHhHhccCCcc-------hhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 329 FLIYEISVGMYCPVTGYLRGRIIPE-------KARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
..+.+++.+..+....++..|..+. +..|..+|+.+....++..+++.+.
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 6677777888888888888888763 3468889999999999888887643
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.88 E-value=1.1e-19 Score=171.58 Aligned_cols=348 Identities=13% Similarity=0.072 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHH-Hh-hhhcc-cc-hhHHHHHHHHHHHHHHhhhccccchhh
Q psy10432 52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYT-LC-CLTKF-SS-DFYILLYGRLFGGIATSILFSGFESWY 127 (440)
Q Consensus 52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~-~~-~~~~~-~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~ 127 (440)
.+...+++.++..+..|+.|.++|+-|+||.++....+.+ ++ .+..+ .+ +++...+.-++.-++.+......++++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457889999999999999999999998777665444444 34 33333 33 344444555555555555544444455
Q ss_pred hccccccccccchhh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHhhc------ccCc
Q psy10432 128 VNEHLNYYLFPVEWL--------------------------NLTFARATFGSGLFAIVSGFTAHFFADIL------NLGP 175 (440)
Q Consensus 128 ~~~~~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~ 175 (440)
. |..+++++ ++..+.-.....+|.++.-.+.-.+.... .+..
T Consensus 152 P------~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~ 225 (477)
T PF11700_consen 152 P------DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAI 225 (477)
T ss_pred H------hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhh
Confidence 5 99888888 89999988888898888777665554332 2334
Q ss_pred hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCC-----CccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhh
Q psy10432 176 IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSL-----LPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWT 250 (440)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (440)
|..+.+.+...++..+..++.+||++++++.+... ..++..+.+|++.|+|....+.+..++...+..+... ..
T Consensus 226 r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~-~~ 304 (477)
T PF11700_consen 226 RVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS-FA 304 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 77777777777777777778888887632222111 1234556677788889999988888888888777655 33
Q ss_pred hhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCc--hhHHHHHHHHHHHH-HHHHHhhh-ccccchhhcc
Q psy10432 251 PVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPE--TMLTLTVYLATFSI-TVSTVLTS-SLFDSRRVLS 321 (440)
Q Consensus 251 ~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~ 321 (440)
.+| +..+ .+.........+..++|+++.+++.|| +|.| +.+..+.....+.. ..++.+.. .......+
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~-- 381 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPW-- 381 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHH--
Confidence 444 2333 556667777888999999999999997 9998 67666665553322 22211111 10011111
Q ss_pred hhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432 322 TNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC 401 (440)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (440)
...+...+.+...|..++...++..+..|+++.+..+|++.......+.+||.++ +.+.+...+.+..+....++
T Consensus 382 --~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~---g~i~~~tg~~r~g~~~l~~l 456 (477)
T PF11700_consen 382 --EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF---GLITDATGSQRYGFLFLLVL 456 (477)
T ss_pred --HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCchhHHHHHHHH
Confidence 2333334566778999999999999999999999999999999999999999977 66666344578888888888
Q ss_pred HHHHHHHHHHhhh
Q psy10432 402 LLVALLASCVFKR 414 (440)
Q Consensus 402 ~~~~~~~~~~~~~ 414 (440)
.+++.++....+.
T Consensus 457 f~~gl~ll~~v~~ 469 (477)
T PF11700_consen 457 FLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHhhccc
Confidence 8888777765554
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=7e-21 Score=181.52 Aligned_cols=324 Identities=13% Similarity=0.024 Sum_probs=209.4
Q ss_pred hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-----hhHHHHHHhHHHH-Hh-hhhcccchhHHH-HHHHHHH
Q psy10432 41 VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-----RKLICISYGIVYT-LC-CLTKFSSDFYIL-LYGRLFG 112 (440)
Q Consensus 41 ~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-~~-~~~~~~~~~~~l-~~~r~l~ 112 (440)
+.+++|+|+++++...++..+...+ .|++|+++||++ ||+.++++.++.. +. ...+..++.... .+..++.
T Consensus 52 l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~ 130 (468)
T TIGR00788 52 LTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLA 130 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 3367999999998876666666554 457999999997 7777777776663 44 334444554444 4488999
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHH---HHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTF---ARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
+++.+....+.++++. |..+ |+++... +......++|.++|+.++|.+.+.++| +..|++.+.+.++.
T Consensus 131 ~~~~a~~dv~~da~~~------e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~--~~~f~~~a~l~ll~ 201 (468)
T TIGR00788 131 ALAKALYDVLVDSLYS------ERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLT--RILFLITAALLLLQ 201 (468)
T ss_pred HHHHHHHHHhHHHHHh------hhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCc--chHHHHHHHHHHHH
Confidence 9999999887777777 8887 5444433 333344558999999999999999999 87887777666655
Q ss_pred HHHHHHhccccCC-CCCccCCC--------------CccchhhhhhhhccCcchHHHHHHHHH-HHhHHHHHHHh--hhh
Q psy10432 190 TLFIYFCWEEHYD-PKTAKSSL--------------LPNSMFSSLKFLFTNPCLLTLGIVQSI-YEGIMYTFIFV--WTP 251 (440)
Q Consensus 190 ~~~~~~~~~e~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~ 251 (440)
.+...++||++. ..++.++. ..++.....+..+++|.++...+..++ ........... +.+
T Consensus 202 -~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~ 280 (468)
T TIGR00788 202 -LFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATT 280 (468)
T ss_pred -HHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEc
Confidence 334556687641 11110000 001112234455777887775554444 11111000000 001
Q ss_pred -hhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHH
Q psy10432 252 -VLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFL 330 (440)
Q Consensus 252 -~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (440)
.++......|......+++.+++..+.+++.+| ++.|+.+.++.++..++.+.........+.....+..........
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 113334888999999999999999999999997 999998888887777765443111101000000000001222333
Q ss_pred HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 331 IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 331 ~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
+.+++.++.......++++..|++.+|+.+++.+...++|..+++.
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 4555677777777899999999999999999999999999999996
No 103
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.88 E-value=1.5e-19 Score=171.77 Aligned_cols=325 Identities=15% Similarity=0.126 Sum_probs=208.2
Q ss_pred hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHH
Q psy10432 35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGG 113 (440)
Q Consensus 35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G 113 (440)
...++.++.|+|-++ ...|+...-.+......|+.|+++|.+|||..++.+.++..++ ++++.++|...++++..+.|
T Consensus 64 a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 445667889999654 4446544444555555589999999999999999999999999 79999999999999999999
Q ss_pred HHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHH
Q psy10432 114 IATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFI 193 (440)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 193 (440)
+|.|.... ... .++|..|.+.|....++...........+|.++..+..+-+| ||.|++..+...+..++.
T Consensus 143 vgaG~~~~-~~~------~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~W--Rw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 143 VGAGVQEL-AAL------AISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGW--RWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HhhHHHHH-HHH------HHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCc--chHHHHHHHHHHHHHHHH
Confidence 99877632 222 244999999998888777766666666788888777766788 666666665544444433
Q ss_pred H-HhccccCCCC--Cc---c-----------------------------C-CCCccc-----------------------
Q psy10432 194 Y-FCWEEHYDPK--TA---K-----------------------------S-SLLPNS----------------------- 214 (440)
Q Consensus 194 ~-~~~~e~~~~~--~~---~-----------------------------~-~~~~~~----------------------- 214 (440)
. +..|+++++. ++ + . ..+.++
T Consensus 214 ~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~ 293 (599)
T PF06609_consen 214 FFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF 293 (599)
T ss_pred HHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh
Confidence 2 3333332110 00 0 0 000000
Q ss_pred --hhhh--hhhhccCcchHH-HHHHHHHHHhHHHHHHHhhhhhh-hccC------CchhhHHHHHHHHHHHHHHHHHHHH
Q psy10432 215 --MFSS--LKFLFTNPCLLT-LGIVQSIYEGIMYTFIFVWTPVL-EVLS------PPLGLVFSCFMISIMIGSKIYSILI 282 (440)
Q Consensus 215 --~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~g~~~~~~~~~~~~~~~~~g~l~ 282 (440)
.+++ ..+++|+++.+. ..+..++....++.....|+... ..++ ...++.....+++..++..+.+.+.
T Consensus 294 ~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~ 373 (599)
T PF06609_consen 294 GAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLF 373 (599)
T ss_pred ccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHH
Confidence 0011 124666644333 44444444444555545566543 2222 2467777888899999999999999
Q ss_pred hhccCCchhH-HHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHH
Q psy10432 283 LKYFKPETML-TLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITN 361 (440)
Q Consensus 283 ~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g 361 (440)
.+ .++.|.. ..+...+..++..+ ... .++... .......+.+++.|..........+-..|++..|++.|
T Consensus 374 ~~-ir~~Kw~li~~~~~~ta~~Gam-a~~-~~~n~~------~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~g 444 (599)
T PF06609_consen 374 SK-IRHIKWQLIFGSVLMTAFCGAM-AAV-RPDNKN------AAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATG 444 (599)
T ss_pred HH-ccchhHHHHHHHHHHHHHHHHH-HHc-cCCCcc------hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHH
Confidence 86 7665544 44444444333222 222 222222 12222334455666666666777777889999999999
Q ss_pred HhhhhhhhHHHHHHHHh
Q psy10432 362 WLRVPTNFITCFTLIFI 378 (440)
Q Consensus 362 ~~~~~~~~g~~~~~~~~ 378 (440)
+..+...+|+.++..++
T Consensus 445 L~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 445 LTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHhhHHHHHHH
Confidence 99999999999888543
No 104
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.88 E-value=5.6e-19 Score=162.00 Aligned_cols=327 Identities=13% Similarity=0.089 Sum_probs=229.2
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHH-HHHHhHHHHHh-hhhcccc------
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLI-CISYGIVYTLC-CLTKFSS------ 100 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~-l~~~~~~~~~~-~~~~~~~------ 100 (440)
...++...| +..|+++..+|.++.+.-+...+..|+.|.++| |+||+|. ++.+.+-.++. .++..++
T Consensus 31 ~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~ 110 (467)
T COG2211 31 VVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTG 110 (467)
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCc
Confidence 444554555 678999999999999999999999999999999 5888776 45576777776 5555555
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cC
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-----LG 174 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----w~ 174 (440)
+....++...+.+++.....-...++.. +.. +++||.+..++.+.+.++|..+...+...+.+.++ +.
T Consensus 111 k~~ya~vtY~l~~l~YT~vniPy~al~~------~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g 184 (467)
T COG2211 111 KLIYALVTYMLLGLGYTLVNIPYGALGP------EITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALG 184 (467)
T ss_pred chHHHHHHHHHHHHHHHheeCchhhcch------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhh
Confidence 3445567778888888887554444444 654 46789999999999999997777766666655432 11
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432 175 PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL- 253 (440)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (440)
++....+.+++..+..+.+++..+|+..+.++.++..+.+.++.+..+++||.++...+...+...+.... .....+|
T Consensus 185 ~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~-~s~~~yy~ 263 (467)
T COG2211 185 YQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIR-GSIMVYYV 263 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHH-hhhhheeE
Confidence 25555555555555666667777887754443322234555667778899999988877665555554433 2233344
Q ss_pred ----hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHH
Q psy10432 254 ----EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAF 329 (440)
Q Consensus 254 ----~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (440)
+..+......+.....+.+++.++..++.+| +|+|+...++.++.+++.+++ .+.. .+ ... ..++..
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~-~f~~-~~--~~~----l~~~~~ 334 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLL-YFTP-AG--SVV----LIVVAL 334 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHH-Hhhc-Cc--chH----HHHHHH
Confidence 2223555566677777788889999999997 999999999999988888777 3322 11 111 345555
Q ss_pred HHHHHhhhchhhhHHhHhccCCcch-------hhHHHHHHhhhhhhhHHHHHHH
Q psy10432 330 LIYEISVGMYCPVTGYLRGRIIPEK-------ARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 330 ~~~~~~~g~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
++..++.+...+..++++.|..+.+ ..|..+|...++..+|.+++..
T Consensus 335 ~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 335 IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 6677788889999999999886533 4577788888888888777764
No 105
>KOG0255|consensus
Probab=99.88 E-value=5.4e-20 Score=179.27 Aligned_cols=313 Identities=15% Similarity=0.116 Sum_probs=213.4
Q ss_pred hhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhh
Q psy10432 43 KDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSI 118 (440)
Q Consensus 43 ~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~ 118 (440)
+.+..+...... ++.+|.+++.+ ++|.++||+|||++++.+.++..++ ++.++++|++.+++.|++.|++.+.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~---i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSL---IFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHh---hheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccc
Confidence 344444444433 67777777776 9999999999999999999999998 8999999999999999999999999
Q ss_pred hccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcc
Q psy10432 119 LFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWE 198 (440)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (440)
.......++. |++++++|+.+..+ ......+..+++..++++.. +| |+.+++......+..++ ++..|
T Consensus 188 ~~~~~~~~~~------E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~W--r~~~~~~~~~~~~~~~~-~~l~~ 255 (521)
T KOG0255|consen 188 PLTVGFGLVA------EIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DW--RWLFWIISIPSGLFLLL-WFLPP 255 (521)
T ss_pred hhHHhHhhhe------eecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hH--HHHHHHHHHHHHHHHHH-HHccC
Confidence 9776666666 99999999999999 77788888888888888877 67 88888877777655444 55556
Q ss_pred ccCCCC----Cc--------c------CCCCccc-hh----------------hhhhhhccCcchHHHHHHHHHHHhHHH
Q psy10432 199 EHYDPK----TA--------K------SSLLPNS-MF----------------SSLKFLFTNPCLLTLGIVQSIYEGIMY 243 (440)
Q Consensus 199 e~~~~~----~~--------~------~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (440)
|+++-. +. + .....++ .. ..+..+++.|++....+...+......
T Consensus 256 Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ 335 (521)
T KOG0255|consen 256 ESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFS 335 (521)
T ss_pred cChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHh
Confidence 876510 00 0 0000000 00 112334444443333332222221111
Q ss_pred HHHHhhhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432 244 TFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN 323 (440)
Q Consensus 244 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (440)
.............+..........+.....+....+...|+ .||+.....+.....++.+...+. ......+
T Consensus 336 ~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~-~gR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------ 407 (521)
T KOG0255|consen 336 LVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPE-FGRRPPLFLSLFLAGIGLLLFGWL-PDDLGGW------ 407 (521)
T ss_pred HHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHh-hccchhH------
Confidence 11111111114445666677777777777888888899997 999999888888888877666332 2222111
Q ss_pred HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
.......+..++.+..+........|..|+..|..+.+..+....+++.++|.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 408 LHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222333345555556688889999999999999999999999999999855
No 106
>PRK11462 putative transporter; Provisional
Probab=99.88 E-value=3.8e-19 Score=169.54 Aligned_cols=325 Identities=10% Similarity=0.016 Sum_probs=198.2
Q ss_pred HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc----cchhHHHH-HHhHHHHHh-hhhcccch--
Q psy10432 31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK----FGRKLICI-SYGIVYTLC-CLTKFSSD-- 101 (440)
Q Consensus 31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~l~-~~~~~~~~~-~~~~~~~~-- 101 (440)
..+...++...+ +..|+++..+|.++.++-+...+..|+.|.++|| +||||..+ ++.+..+++ .++...++
T Consensus 25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s 104 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLS 104 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCC
Confidence 334444554444 6789999999999999999999999999999995 79877754 566777776 44333332
Q ss_pred ----hHHHHHHHHHHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Q psy10432 102 ----FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL--- 173 (440)
Q Consensus 102 ----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw--- 173 (440)
...+.+..++..++.........++.. |..+ ++||.+..++...+..+|..+++.+...+.+..|-
T Consensus 105 ~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~------~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~ 178 (460)
T PRK11462 105 MNGKMIYAAITYTLLTLLYTVVNIPYCALGG------VITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNK 178 (460)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHH------HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 344566667778888777655555555 7665 77999999999999999988888877666555431
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432 174 --GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP 251 (440)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (440)
.|+....+.+++.++.....+...+|++++++ ++.+.++.++..++||.++.+.....+.......... ...
T Consensus 179 ~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-----~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~-~~~ 252 (460)
T PRK11462 179 PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-----TTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGG-AMM 252 (460)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-----cCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh-Hhh
Confidence 11443344444433333333444466533221 1223566788889999887765554444333322212 112
Q ss_pred hh-hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432 252 VL-EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 252 ~~-~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
++ +. .+...+.......++.+++.++.+++.|| +++|+....+.....+....+ .+.. .. ... ....
T Consensus 253 y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~-~~~~-~~--~~~----~~~~ 323 (460)
T PRK11462 253 YYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAM-FFVP-MQ--ASI----TMFV 323 (460)
T ss_pred hhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHH-HHhc-hh--HHH----HHHH
Confidence 22 11 12334456667778889999999999997 988877654444333322222 1111 11 111 1122
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCc-------chhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIP-------EKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
...+.+++.+...+..+++..|..+ .+..|..++.......+|..+++.
T Consensus 324 ~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~ 379 (460)
T PRK11462 324 FIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGA 379 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 2233344455556666667776654 223455567766777777777764
No 107
>PTZ00207 hypothetical protein; Provisional
Probab=99.87 E-value=1.6e-19 Score=172.68 Aligned_cols=353 Identities=14% Similarity=0.084 Sum_probs=229.6
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc------chhHHH
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS------SDFYIL 105 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~------~~~~~l 105 (440)
.++.+.+++.+++|+|.++++++..++...+ ...++.|+++||+|||+++.++.+++.++ .+++++ ++++.+
T Consensus 45 ~fsv~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l 123 (591)
T PTZ00207 45 AFNLISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL 123 (591)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence 3455667778999999999999887766554 45667899999999999999999999998 666665 689999
Q ss_pred HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhhcccCchhhHHHHHH
Q psy10432 106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIV-SGFTAHFFADILNLGPIAPFAVAIP 184 (440)
Q Consensus 106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~gw~~~~~~~~~~~ 184 (440)
++.|++.|+|.+...+.....+. +++| ++||++.|+...+.++|..+ +++..+++.+ +| +..|+..+.
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~------~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~--~~~fl~l~v 192 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVL------SVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NT--SAYFFFLMS 192 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hH--HHHHHHHHH
Confidence 99999999999988776665665 8886 78999999999999999865 5555555432 34 444444444
Q ss_pred HHHHHHHHHHHhccccCCCC----C----c-c------------------------------------------------
Q psy10432 185 FLLGSTLFIYFCWEEHYDPK----T----A-K------------------------------------------------ 207 (440)
Q Consensus 185 ~~~~~~~~~~~~~~e~~~~~----~----~-~------------------------------------------------ 207 (440)
+.++..++...++++++.+. + + +
T Consensus 193 l~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~ 272 (591)
T PTZ00207 193 FALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLG 272 (591)
T ss_pred HHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44433333333333222100 0 0 0
Q ss_pred ---------------------------------C-C------------------C--------C-c-cchhhhhhhhccC
Q psy10432 208 ---------------------------------S-S------------------L--------L-P-NSMFSSLKFLFTN 225 (440)
Q Consensus 208 ---------------------------------~-~------------------~--------~-~-~~~~~~~~~~~~~ 225 (440)
+ + + + . .+..+++++.+++
T Consensus 273 ~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~ 352 (591)
T PTZ00207 273 SNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKT 352 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhc
Confidence 0 0 0 0 0 0001134455556
Q ss_pred cchHHHHHHHHHHHhHHHHHHHhhhhhhhcc-C----Cchhh-HHHHHHHHHHHHHHHHHHHH---hhccC----Cchh-
Q psy10432 226 PCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL-S----PPLGL-VFSCFMISIMIGSKIYSILI---LKYFK----PETM- 291 (440)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~g~-~~~~~~~~~~~~~~~~g~l~---~r~~~----~~~~- 291 (440)
.++|.+.+..++..+.....++....+.+.. + .+... +.+..++++.+|++..|.+. +|+.. ++..
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~ 432 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIA 432 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHH
Confidence 7888888888888777776666666666322 2 21122 67888999999999888876 22121 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH
Q psy10432 292 LTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT 371 (440)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 371 (440)
+.+..+ +.++.+.+ .+ ..+ . . .+.++..+.+++.|..++.....+.|.+. ++-|+.+.+.....-+|+
T Consensus 433 l~~~~~-~~~~~lll-~~-~~p---~-~----~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs 500 (591)
T PTZ00207 433 LFIPSV-CIITMLTL-FL-TLP---K-A----ALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSA 500 (591)
T ss_pred HHHHHH-HHHHHHHH-HH-HCC---c-c----HhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHH
Confidence 222222 33333222 21 111 0 1 46677777888899999999999999999 999998888877777777
Q ss_pred HHHHHHhhccccccCc------------cchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 372 CFTLIFIKNEDAEGGK------------LIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 372 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
.+-.-.+. |...|. ..=++..|++.+++++.+.+....
T Consensus 501 ~~~n~~l~--G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 501 IFLNRLLY--GEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHH--HHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 76644332 222221 111577888888888777766544
No 108
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.87 E-value=2.5e-21 Score=190.16 Aligned_cols=264 Identities=14% Similarity=0.133 Sum_probs=190.0
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc------
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS------ 100 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~------ 100 (440)
.+.....++.+.++++++.++.|+ .+.+++++.. ++.|+++||+||||.+.++.++++++ +++++.+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~---i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y 125 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI---IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRY 125 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH---HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCc
Confidence 455667777888999999999988 4555555555 49999999999999999999999998 5555432
Q ss_pred ---------------------------------------------hhHHHHHHHHHHHHHHhhhccccchhhhccccccc
Q psy10432 101 ---------------------------------------------DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYY 135 (440)
Q Consensus 101 ---------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 135 (440)
.+..++++|+++|+|.+...+...+++. |
T Consensus 126 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~------d 199 (633)
T TIGR00805 126 SYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYID------D 199 (633)
T ss_pred cccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhh------c
Confidence 2456789999999999999777666666 9
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cc---------------C----chhhHHHHHHHHHHHHHHHHH
Q psy10432 136 LFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NL---------------G----PIAPFAVAIPFLLGSTLFIYF 195 (440)
Q Consensus 136 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw---------------~----~~~~~~~~~~~~~~~~~~~~~ 195 (440)
++|+++|++.+++......+|..+|+++++++.+.+ +| | |+..|++.+.+.++..+.. +
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l-~ 278 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF-F 278 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999998754 22 1 2566777666665554443 3
Q ss_pred hccccCCCCCc--c-----CC------C--------CccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432 196 CWEEHYDPKTA--K-----SS------L--------LPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL- 253 (440)
Q Consensus 196 ~~~e~~~~~~~--~-----~~------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (440)
.+|++.+++++ + ++ . ..++..+..+.+++||.++...+...+.....+.+....+.++
T Consensus 279 ~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~ 358 (633)
T TIGR00805 279 FFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLE 358 (633)
T ss_pred hCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44543321100 0 00 0 0012234567889999999988888888888887766445454
Q ss_pred hccC---CchhhHHHHHHH-HHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHH
Q psy10432 254 EVLS---PPLGLVFSCFMI-SIMIGSKIYSILILKYFK--PETMLTLTVYLATFSITV 305 (440)
Q Consensus 254 ~~~~---~~~g~~~~~~~~-~~~~~~~~~g~l~~r~~~--~~~~~~~~~~~~~~~~~~ 305 (440)
+..+ .+++++.....+ +.+++.++.|++.|| ++ .++.+..+.....++.+.
T Consensus 359 ~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r-~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 359 NQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKK-FKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeee-ecccHHHHHHHHHHHHHHHHHH
Confidence 3344 566777666665 567899999999997 76 445666666666665433
No 109
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=4.7e-25 Score=211.36 Aligned_cols=348 Identities=16% Similarity=0.168 Sum_probs=217.6
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc---hhHHHHHHHHHHHHHHhhhccccchh
Q psy10432 51 NIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS---DFYILLYGRLFGGIATSILFSGFESW 126 (440)
Q Consensus 51 ~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~ 126 (440)
+.++..+..++...+.+++.|.++||+|||+.++.+.++..++ ++.++++ |++.+.++|++.|++.|...+....+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~ 126 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIY 126 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4455555555555555679999999999999999999999999 7888998 99999999999999999997766666
Q ss_pred hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHHHHHHHHHHhccccCCC--
Q psy10432 127 YVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDP-- 203 (440)
Q Consensus 127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-- 203 (440)
+. |..|+++|++..++.+....+|.+++..++..+.+..+ |.||..+....+..++..+ ...++||+|+-
T Consensus 127 ~~------E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~ 199 (451)
T PF00083_consen 127 IS------EIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLL 199 (451)
T ss_pred cc------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceec
Confidence 66 99999999999999999999999999888766644444 2338887777766654433 44678998750
Q ss_pred --C--Cc-c------------CC---CCccchh------hhhhhhccCcc----hHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432 204 --K--TA-K------------SS---LLPNSMF------SSLKFLFTNPC----LLTLGIVQSIYEGIMYTFIFVWTPVL 253 (440)
Q Consensus 204 --~--~~-~------------~~---~~~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (440)
. ++ + ++ +..++.. ..++++++++. .........+.....+.....+.+.+
T Consensus 200 ~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i 279 (451)
T PF00083_consen 200 SKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSI 279 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence 0 00 0 00 0000000 12445555533 22222222222222211222333433
Q ss_pred -hccCCchh-hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH-Hhhhccccc--hhhcchhHHHHH
Q psy10432 254 -EVLSPPLG-LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVST-VLTSSLFDS--RRVLSTNLCFVA 328 (440)
Q Consensus 254 -~~~~~~~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~ 328 (440)
+..+.... .......+...++.++...+.|| +|||+.+..+...+.++.+.+. ......+.. +.. ..+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~ 354 (451)
T PF00083_consen 280 FENAGISNSFLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSI----LSIVF 354 (451)
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc----cccee
Confidence 33332222 23334445566777777899997 9999998888877777665552 011111110 011 11222
Q ss_pred HHHHHHhhh-chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 329 FLIYEISVG-MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 329 ~~~~~~~~g-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
..+..+..+ ...+....+..|.+|++.|+++.|+......+++.+++.+. ....+ ..+....+.+.++++++..+
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~---~~~~~-~~~~~~~~~i~~~~~~i~~i 430 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF---PYLFN-NLGGWGVFLIFAGVCLIAII 430 (451)
T ss_pred eeecccccccccccccccccccccccccccccccccccccccccccccccc---ccccc-cccccccchhhHHHHHHHHh
Confidence 222222233 24566778889999999999999999999999999988744 33444 34434445555555444444
Q ss_pred HH-HHhhh
Q psy10432 408 AS-CVFKR 414 (440)
Q Consensus 408 ~~-~~~~~ 414 (440)
+. ...++
T Consensus 431 ~~~~~lpE 438 (451)
T PF00083_consen 431 FVYFFLPE 438 (451)
T ss_pred heeEEEee
Confidence 43 33444
No 110
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.85 E-value=1.2e-17 Score=157.46 Aligned_cols=361 Identities=11% Similarity=0.054 Sum_probs=208.2
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhcccc-hhHHHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFSS-DFYILLYGR 109 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~~-~~~~l~~~r 109 (440)
...+++... +++|.++.+.+.++........+..+++|+++||+ ||||+++.+.++..++ .+.+..+ +...+.++.
T Consensus 28 ~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l 107 (493)
T PRK15462 28 MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSL 107 (493)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Confidence 334443333 67899999998877777777677778999999999 9999999999999888 5544432 223344444
Q ss_pred HHHHHHHhhhccccchhhhccccccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVE--WLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
.+.++|.|...+...+++. |.+|++ +|.+++++.....++|..++|.+.+++.+..|| +..|.+.++..+
T Consensus 108 ~li~iG~G~~~~~~~alv~------elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw--~~~F~iaaigm~ 179 (493)
T PRK15462 108 AIIVCGYGLFKSNVSCLLG------ELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSW--AMGFGLAAVGMI 179 (493)
T ss_pred HHHHHhcccccccHHHHHH------HHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhCh--HHHHHHHHHHHH
Confidence 5555666766666566666 999876 689999999999999999999999999998899 878777654443
Q ss_pred HHHHHHHHhc---cccCCCCCccCCCCccc----------------h-----hhhh--------------------hhhc
Q psy10432 188 GSTLFIYFCW---EEHYDPKTAKSSLLPNS----------------M-----FSSL--------------------KFLF 223 (440)
Q Consensus 188 ~~~~~~~~~~---~e~~~~~~~~~~~~~~~----------------~-----~~~~--------------------~~~~ 223 (440)
+..+...... ++....++++.++++.. . .+.+ +.-.
T Consensus 180 l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (493)
T PRK15462 180 AGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAE 259 (493)
T ss_pred HHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333222211 11111011110000000 0 0000 0000
Q ss_pred ---cCcchHHHHHHHHHHHhHHHHHHHhh---hhhh-hcc------C--CchhhHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy10432 224 ---TNPCLLTLGIVQSIYEGIMYTFIFVW---TPVL-EVL------S--PPLGLVFSCFMISIMIGSKIYSILILKYFKP 288 (440)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~------~--~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~ 288 (440)
.+++++.+... ++....++..+... ...+ +++ + ...++..+.+.+..++.+++.+++-.| ..+
T Consensus 260 ~~~er~r~~~~~~l-~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~-l~~ 337 (493)
T PRK15462 260 NQKQRKELGLIVTL-TFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE-SVA 337 (493)
T ss_pred CHHHHhhHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHH-Hhc
Confidence 01222221111 11111111111111 1122 111 1 446778889999888888888877554 311
Q ss_pred --c-----hhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHH
Q psy10432 289 --E-----TMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITN 361 (440)
Q Consensus 289 --~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g 361 (440)
| .-...++++.+++++.+............. .....+....+...+.-...|...+.+++..|++.+|+.+|
T Consensus 338 ~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~-s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg 416 (493)
T PRK15462 338 GNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHS-SLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTG 416 (493)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-CHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHH
Confidence 1 125667777777766552211111110000 01134555556666677789999999999999999999999
Q ss_pred Hhhhhh-hhHHHHHHHHhhcccc-ccC-------ccchhhHHHHHHHHHHHHH
Q psy10432 362 WLRVPT-NFITCFTLIFIKNEDA-EGG-------KLIAIHSVFVVCTACLLVA 405 (440)
Q Consensus 362 ~~~~~~-~~g~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~ 405 (440)
...... .++..++..+..-... ..+ ....+...|...+...+++
T Consensus 417 ~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 417 IYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 986633 4666655542211000 000 0124566777776655544
No 111
>KOG0253|consensus
Probab=99.84 E-value=7.1e-19 Score=152.18 Aligned_cols=341 Identities=13% Similarity=0.048 Sum_probs=219.6
Q ss_pred HhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhc
Q psy10432 42 YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILF 120 (440)
Q Consensus 42 ~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~ 120 (440)
.+..|.+..+..++......-..+.+..+|.++|++|||+...+..+...+. .+.+.++|+..+++.|.+.|+|.|. .
T Consensus 105 ~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~ 183 (528)
T KOG0253|consen 105 DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-L 183 (528)
T ss_pred HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-c
Confidence 3567777666665443333333333359999999999999999998888887 7999999999999999999999999 6
Q ss_pred cccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432 121 SGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH 200 (440)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~ 200 (440)
|...++.. |..|..+|....-.. ..+.+|.+....+.-.+..++|| |+..........+. ....+.+||+
T Consensus 184 pv~~~~yl------e~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gw--r~~l~~~~~pl~~~-a~f~~w~~ES 253 (528)
T KOG0253|consen 184 PVDSAIYL------EFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGW--RYLLFTSSTPLMFA-ARFLVWVYES 253 (528)
T ss_pred cHhHHHHH------HhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHhHHHHH-HHHHhhcccC
Confidence 88778888 999999998887777 89999999999999999999999 44443333443333 3345678998
Q ss_pred CCCC-----C----------------------------ccCCCC-----------ccchhhhhhhhccCcchHH------
Q psy10432 201 YDPK-----T----------------------------AKSSLL-----------PNSMFSSLKFLFTNPCLLT------ 230 (440)
Q Consensus 201 ~~~~-----~----------------------------~~~~~~-----------~~~~~~~~~~~~~~~~~~~------ 230 (440)
++-. + ++++++ .++.......++. |+++.
T Consensus 254 pRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls-p~lrkttlllw 332 (528)
T KOG0253|consen 254 PRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS-PKLRKTTLLLW 332 (528)
T ss_pred cchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC-hHHHHHHHHHH
Confidence 7600 0 000000 0111112222222 33322
Q ss_pred -HHHHHHHHHhHHHHHHHhhhhhhhcc----------C------------Cchhh-HHHHHHHHHHHHHHHHHHHHhhcc
Q psy10432 231 -LGIVQSIYEGIMYTFIFVWTPVLEVL----------S------------PPLGL-VFSCFMISIMIGSKIYSILILKYF 286 (440)
Q Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------~~~g~-~~~~~~~~~~~~~~~~g~l~~r~~ 286 (440)
+...+.+.+.+...+ ....++.. + ..-.+ -.....+....|.++.+++.|| +
T Consensus 333 ~iwfgnafsyyg~VLl---ttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver-l 408 (528)
T KOG0253|consen 333 RIWFGNAFSYYGSVLL---TTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER-L 408 (528)
T ss_pred HHHHhhHHHHHHHHHH---HHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH-h
Confidence 222222222111111 11111100 0 11111 2344567788999999999998 9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhh
Q psy10432 287 KPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366 (440)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 366 (440)
|||+.+...++..++..+.+ ......+ . .....+...++....+...+.+..|..|+..|+++.|....+
T Consensus 409 GRKkTMal~l~~f~iflfll-~~c~~rn--~-------~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsm 478 (528)
T KOG0253|consen 409 GRKKTMALSLILFGIFLFLL-TTCKTRN--A-------YTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSM 478 (528)
T ss_pred cchhHHHHHHHHHHHHHHHH-HHhcCcc--h-------hHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhH
Confidence 99999999998888876555 2222222 1 222223344456666778889999999999999999999999
Q ss_pred hhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 367 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
..+|+++.|.+.. ..+ .+......+.+.+++++.+....++-
T Consensus 479 aRIggI~~p~iA~----~~e--~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 479 ARIGGIFSPVIAM----RAE--LSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred HhhhhhhhhHHHH----Hhc--cceeehHHHHHHHHHHHHHHheeeee
Confidence 9999999998331 112 12234445555555666555555543
No 112
>KOG0252|consensus
Probab=99.84 E-value=1.5e-20 Score=167.35 Aligned_cols=339 Identities=15% Similarity=0.120 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc-------hhHHHHHHHHHHHHHHhhhccccc
Q psy10432 53 ALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS-------DFYILLYGRLFGGIATSILFSGFE 124 (440)
Q Consensus 53 ~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~ 124 (440)
+.+..+|.+.+|+ +.|++.||+|||+++...+++..++ ++++++. -..++...|++.|+|.|.-+|.+.
T Consensus 90 n~~A~vGti~GQl---~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSA 166 (538)
T KOG0252|consen 90 NAAALVGTIFGQL---FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSA 166 (538)
T ss_pred HHHHHHHHHHHHH---HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchH
Confidence 3366667777776 9999999999999999998888887 5555542 246788999999999999999888
Q ss_pred hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------ccCchhhHHHHHHHHHHH
Q psy10432 125 SWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL---------------NLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------gw~~~~~~~~~~~~~~~~ 189 (440)
+.++ |...+++||...+..-+..+.|.+.|.+++-.+...+ =| |..+.+.++..+.
T Consensus 167 tI~S------E~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vW--Rl~~glg~vpa~~- 237 (538)
T KOG0252|consen 167 TIMS------ESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVW--RIIFGLGAVPALL- 237 (538)
T ss_pred HHhh------hhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHH--HHHHHHHHHHHHH-
Confidence 8877 9999999999999988888888888877776654321 15 7777776666553
Q ss_pred HHHHHHhccccCCCC-----C-------ccCCCC------------ccchhhh---hhhhcc---CcchHHHHHHHHHHH
Q psy10432 190 TLFIYFCWEEHYDPK-----T-------AKSSLL------------PNSMFSS---LKFLFT---NPCLLTLGIVQSIYE 239 (440)
Q Consensus 190 ~~~~~~~~~e~~~~~-----~-------~~~~~~------------~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~ 239 (440)
.+...+.+||+++-+ + .++... .+...+. +...+. -++++......++..
T Consensus 238 ~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllD 317 (538)
T KOG0252|consen 238 VLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLD 317 (538)
T ss_pred HHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333455678876421 1 000000 0000001 111111 123333455555555
Q ss_pred hHHHHHHHhhhhhhhccC---Cc--------hhhHHHHHH-HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH
Q psy10432 240 GIMYTFIFVWTPVLEVLS---PP--------LGLVFSCFM-ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVST 307 (440)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~---~~--------~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 307 (440)
.+.|........+++..+ .. ......+.. .+.+.|..+...+.|+ +||++....++.++.+..+.+
T Consensus 318 iafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~~- 395 (538)
T KOG0252|consen 318 IAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFVI- 395 (538)
T ss_pred hhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHHH-
Confidence 555554333333443222 11 112222222 2233355666678897 999999999999888877655
Q ss_pred HhhhccccchhhcchhHHHHHHHHHHHhhhchhh--hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc
Q psy10432 308 VLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP--VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG 385 (440)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 385 (440)
....+... ... ..++...+.. .++-..| ....+..|.+|.+.||+..|+....+..|+.++...+ ....
T Consensus 396 ~~~y~~~~-~~~----Gf~v~y~l~~-ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F---~~~t 466 (538)
T KOG0252|consen 396 AGPYNQLE-NTI----GFVVLYSLTF-FFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF---LYLT 466 (538)
T ss_pred cCCccccc-ccC----ceeehHHHHH-HHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh---hHhh
Confidence 32211110 100 1222222222 2333444 4456678999999999999999999999999999865 3333
Q ss_pred C----ccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 386 G----KLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 386 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+ ...+.+.++++.+++++++.+..+.+++
T Consensus 467 ~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 467 DHNYPPNIGVRNVFIILAGCMLLGILFTLLIPE 499 (538)
T ss_pred hccCCccccchHHHHHHHHHHHHhHheeEEeec
Confidence 3 1457789999999999999988887776
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.83 E-value=2.1e-18 Score=155.52 Aligned_cols=274 Identities=13% Similarity=0.059 Sum_probs=190.7
Q ss_pred ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------
Q psy10432 98 FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI------- 170 (440)
Q Consensus 98 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------- 170 (440)
...+++.++++-++.|.|.+...++.++++. +..++|++++.+++.+..+++|.++||.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~------~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~ 79 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVS------ILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSM 79 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHH------HHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhh
Confidence 4578999999999999999999998888888 999999999999999999999999999999988732
Q ss_pred ---------cccCchhhHHHHHHHHHHHHHHH-HHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHh
Q psy10432 171 ---------LNLGPIAPFAVAIPFLLGSTLFI-YFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEG 240 (440)
Q Consensus 171 ---------~gw~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (440)
.+| +.++++.+.+..+..+.. ....||.+++++++.+ +.++ ...+..+++|.++...+..++..+
T Consensus 80 ~~~~~~~~~~~~--~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 80 QVATANAEAAKV--HTPYLLLAGALAVLAIIFAFLPLPELQEADVARVS-SGDT--TQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred hhhhhhHHHHHH--HHHHHHHHHHHHHHHHHHHHccCCCCCcccccccc-cccc--cchhhHHhhHHHHHHHHHHHHHHH
Confidence 245 888885555544333332 3344554332221111 1111 122346677888776666655554
Q ss_pred HHHHHHHhhhhhh-h-c--cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432 241 IMYTFIFVWTPVL-E-V--LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL 313 (440)
Q Consensus 241 ~~~~~~~~~~~~~-~-~--~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (440)
....... |.+.| . . .+ .+.+...+....+.++|+++.+++.|| +++++.+..+..+.++..+.. ... +
T Consensus 155 ~e~~~~~-w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~-~~~--~ 229 (310)
T TIGR01272 155 AEVSAGS-FLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGA-ALT--H 229 (310)
T ss_pred HHHHHHH-HHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHH-HHc--C
Confidence 5544433 55555 2 1 13 667888999999999999999999998 999998877776666655333 211 1
Q ss_pred ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhH
Q psy10432 314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHS 393 (440)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 393 (440)
. . ...+.+.+.+++.+..+|...+...+..|+ +.+++.++. ....+|+.+.|.++ |.+.| ..+.+.
T Consensus 230 ~--~------~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~---G~lad-~~g~~~ 295 (310)
T TIGR01272 230 G--Y------VAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQ---GSLAD-CLGIQL 295 (310)
T ss_pred C--H------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHH---HHHHH-hccchH
Confidence 1 1 123444566778888999988888887664 355666665 56778999999866 77878 777788
Q ss_pred HHHHHHHH
Q psy10432 394 VFVVCTAC 401 (440)
Q Consensus 394 ~~~~~~~~ 401 (440)
.|.+...+
T Consensus 296 a~~v~~~~ 303 (310)
T TIGR01272 296 AFALPVPC 303 (310)
T ss_pred HHHHHHHH
Confidence 77754433
No 114
>KOG2563|consensus
Probab=99.82 E-value=7.2e-18 Score=150.61 Aligned_cols=351 Identities=15% Similarity=0.142 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHHHHHH-----HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHh
Q psy10432 14 KRLQVRYFIPFFLATFS-----DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYG 87 (440)
Q Consensus 14 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~ 87 (440)
+..++||+++...++.. +|+....+.+.. +-+| +.+..-|...+...+...++.++-|+.||+|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 45667787777666664 343333332333 4456 5444555555555555555569999999999999999999
Q ss_pred HHHHHh-hh--hccc----chhH--HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHH
Q psy10432 88 IVYTLC-CL--TKFS----SDFY--ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAI 158 (440)
Q Consensus 88 ~~~~~~-~~--~~~~----~~~~--~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (440)
.+.+++ .+ .+.. +.++ ....+..+.+.+.-+... .-..+..-|++++||..+..+-.++..+|..
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~------lPskiA~~WF~~~qra~A~~~~v~~n~LGva 190 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG------LPSKIAAVWFPPDQRAIATVLGVMGNPLGVA 190 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc------cccHHHHhhCCcchhhhhhhHHHhcchHHHH
Confidence 999998 33 2222 3444 566778888877777633 2334555899999999999999999999999
Q ss_pred HHHHHHHHHHhhc------ccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCcc--CCCCccchhhhhhhhccCcchHH
Q psy10432 159 VSGFTAHFFADIL------NLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAK--SSLLPNSMFSSLKFLFTNPCLLT 230 (440)
Q Consensus 159 ~g~~~~~~l~~~~------gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (440)
+|-++...+..+- .|.-...|+....+..+...+..+..+|+|+.+... ......+..++.++.++|+++..
T Consensus 191 vg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~i 270 (480)
T KOG2563|consen 191 VGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFII 270 (480)
T ss_pred HHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHH
Confidence 9888887776542 341112344333333333333344444433322211 11122346788899999999999
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhh--hcc-CCchhhHHHHHHHHHHHHHHHHHHHHhhccCC-chhHHHHHHHHHHHHHHH
Q psy10432 231 LGIVQSIYEGIMYTFIFVWTPVL--EVL-SPPLGLVFSCFMISIMIGSKIYSILILKYFKP-ETMLTLTVYLATFSITVS 306 (440)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-~~~~~~~~~~~~~~~~~~ 306 (440)
..+...+..+.++...+...+.+ ..| +...|.......+++++++.+.|.+.|| .+. |....+......++...+
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk-tk~fk~~~~v~~~~~~v~~~~l 349 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADK-TKKFKLTTLVLYLFALVGTLML 349 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHH
Confidence 88888887777776655454344 222 3789999999999999999999999998 544 334444444444443333
Q ss_pred HHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
..........+ ..+....+++++.....|....+..|..-+..-++..|+.+..+++-+.+-....
T Consensus 350 ~~~t~~~~~~v------iv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~ 415 (480)
T KOG2563|consen 350 LTCTLFLGDSV------IVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIM 415 (480)
T ss_pred HHhhccCCceE------ehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHH
Confidence 23333333333 2455555666667778888888888887777788889999999988888777744
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.82 E-value=9.2e-17 Score=143.38 Aligned_cols=351 Identities=13% Similarity=0.066 Sum_probs=240.9
Q ss_pred hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-----hhHHHHH-HhHHHHHh-hhhc-----ccc-------h
Q psy10432 41 VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-----RKLICIS-YGIVYTLC-CLTK-----FSS-------D 101 (440)
Q Consensus 41 ~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~-~~~~~~~~-~~~~-----~~~-------~ 101 (440)
+..|++++...++.+..+.+.... ..+.+|+.+|+++ ||..++. |..+...+ .+.. ++. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 347899999999888888888765 5789999999999 8877655 55555444 2211 222 2
Q ss_pred h--H--HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCch-
Q psy10432 102 F--Y--ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPI- 176 (440)
Q Consensus 102 ~--~--~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~- 176 (440)
. + ...+.-.+.|+|.+...++..+++. |..|+|+|+++.++...+.-+|.+++..+.+.+.+.++- .|
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~------D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-~rL 157 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLA------DLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-ERL 157 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHH------hcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-HHH
Confidence 2 2 2345567789988888777777777 999999999999999999999999999999988887653 12
Q ss_pred -hhHHHHHHHHHHHHHHHHHhccccCCCCCc-cCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh
Q psy10432 177 -APFAVAIPFLLGSTLFIYFCWEEHYDPKTA-KSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE 254 (440)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (440)
..+.....+.....++.. +-.|++.++.. ..++++.+.++.++++..+|+...+....++...+++.- ..++|
T Consensus 158 ~~v~~~~a~i~~~l~~ia~-wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q----D~iLE 232 (403)
T PF03209_consen 158 IQVIQGVALIALLLNLIAL-WGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQ----DVILE 232 (403)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhh----HHHcC
Confidence 122222222222222222 22344333222 233355667888899999999888777766666665422 22334
Q ss_pred ccC--------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432 255 VLS--------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF 326 (440)
Q Consensus 255 ~~~--------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (440)
.|+ .+...+....+.+.++|-...+++..|+.++++...+++..+.+++..+ .........+ ..-
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li-i~a~~~~~~~------~~~ 305 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI-ILAGPLGSPW------LFR 305 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH-HHHHhcccch------HHH
Confidence 443 5566677888889999999999888754788888888888888777665 3333333233 456
Q ss_pred HHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc---------CccchhhHHHHH
Q psy10432 327 VAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG---------GKLIAIHSVFVV 397 (440)
Q Consensus 327 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 397 (440)
.+..+++++.|++.....+.+.+..++++.|..+|.....+.+...++.. .+ +... +...+|..+|.+
T Consensus 306 ~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~--~G-G~~~D~~~~~~~~~~~~aY~~VF~l 382 (403)
T PF03209_consen 306 PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTF--LG-GALRDLVRALFGNSPALAYGVVFAL 382 (403)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHhccCCcchHHHHHHHH
Confidence 66777888899988888888889988999999999988887776666654 22 1111 235678888888
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy10432 398 CTACLLVALLASCVFKR 414 (440)
Q Consensus 398 ~~~~~~~~~~~~~~~~~ 414 (440)
=++..+++..+...+.+
T Consensus 383 Ea~ll~~a~~ll~~l~~ 399 (403)
T PF03209_consen 383 EAVLLLAALVLLGRLDR 399 (403)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 88888777766655443
No 116
>KOG4686|consensus
Probab=99.81 E-value=1.9e-18 Score=144.18 Aligned_cols=378 Identities=15% Similarity=0.109 Sum_probs=228.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhh----hh--HhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHh
Q psy10432 15 RLQVRYFIPFFLATFSDWIQG----PY--VYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYG 87 (440)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~ 87 (440)
+..+|++...+.++.+..... |. -.+.-.|.+++.++..++|++......+...+.|++.|| +|-|..-++-+
T Consensus 38 ~l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~ 117 (459)
T KOG4686|consen 38 ALGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILC 117 (459)
T ss_pred hhhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHH
Confidence 344566666666666511111 11 112225667777787788888877777777899999995 67776655544
Q ss_pred HHHHHh-hh---hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy10432 88 IVYTLC-CL---TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFT 163 (440)
Q Consensus 88 ~~~~~~-~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 163 (440)
....++ .+ -+..+.+|.+..+|++.|+|.-.. .++..+++..|++.+|.+.++|+..+..-+|..+--.+
T Consensus 118 ~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESl------AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~l 191 (459)
T KOG4686|consen 118 IFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESL------AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLL 191 (459)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhh------hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeee
Confidence 445555 33 446789999999999999998776 34556666699999999999999999999998887777
Q ss_pred HHHHHhhccc----CchhhH---HHHHHHHHHHHHHHH--HhccccCCCCCccCCC--CccchhhhhhhhccCcchHHHH
Q psy10432 164 AHFFADILNL----GPIAPF---AVAIPFLLGSTLFIY--FCWEEHYDPKTAKSSL--LPNSMFSSLKFLFTNPCLLTLG 232 (440)
Q Consensus 164 ~~~l~~~~gw----~~~~~~---~~~~~~~~~~~~~~~--~~~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
.+++.+..+- ..+... +..........+... .-+-|++.++.-+.++ ..+..+-.-..-+ .|.+|.+.
T Consensus 192 m~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f-~ppfw~~~ 270 (459)
T KOG4686|consen 192 MPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTF-YPPFWVLV 270 (459)
T ss_pred cHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCccccccccc-CccHHHHH
Confidence 7777665431 001111 111111110111110 1111111111000000 0000000111112 37889988
Q ss_pred HHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHH
Q psy10432 233 IVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTV 308 (440)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 308 (440)
++..+.+...+-++..-+..+ +.+| ..++-+.+.......+.+++.|.++|| .|++...+.+.....+..=..+.
T Consensus 271 iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~~~tl~~H~~l~ 349 (459)
T KOG4686|consen 271 IICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASACILTLLGHSGLF 349 (459)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHHHHHHHHhhhHH
Confidence 888888888877766444444 4444 566677777777777889999999998 99887766555444333222212
Q ss_pred hhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc
Q psy10432 309 LTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL 388 (440)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 388 (440)
++... ++ .++.+.+....+.....+..+...+|+++.|+++|..+.+.|+|-.+.|.+. +.+.|..
T Consensus 350 Ft~ls--Py---------~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia---g~i~d~~ 415 (459)
T KOG4686|consen 350 FTFLS--PY---------TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA---GFIADGD 415 (459)
T ss_pred hhhcc--HH---------HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh---heeecCC
Confidence 21111 12 2222222234444444666777788999999999999999999999999944 6666632
Q ss_pred ch---hhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 389 IA---IHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 389 ~~---~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
.+ .+..|..++.+.+....+.+.+.+
T Consensus 416 g~y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 416 GSYDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 22 345566666666666666666655
No 117
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=3.9e-18 Score=151.52 Aligned_cols=341 Identities=12% Similarity=0.041 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH-h-hhhcccch---hHHHHHHHHHHHHHHhhhccccchh
Q psy10432 52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL-C-CLTKFSSD---FYILLYGRLFGGIATSILFSGFESW 126 (440)
Q Consensus 52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~-~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~ 126 (440)
.+...+++.+...+.+|+.|.++|+.|+||..+.-.....+ + +...+.++ ++..++...+..++........+++
T Consensus 60 ~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~ 139 (438)
T COG2270 60 WGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSM 139 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhH
Confidence 34478888888999999999999999977776554444443 4 44444433 4445667778888888776666666
Q ss_pred hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH--HHHHh--------------hcccCchhhHHHHHHHHHHHH
Q psy10432 127 YVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTA--HFFAD--------------ILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~--------------~~gw~~~~~~~~~~~~~~~~~ 190 (440)
+. |..++++.++..+.-.....+|..+.-... ..+.. ..+-..|..+.+.+...++..
T Consensus 140 L~------~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~ 213 (438)
T COG2270 140 LP------RLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFA 213 (438)
T ss_pred hh------hhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHH
Confidence 66 999999888887777666667665543332 11111 012233667777777766666
Q ss_pred HHHHHhccccCCCCCcc-C--CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC---Cchhh
Q psy10432 191 LFIYFCWEEHYDPKTAK-S--SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGL 262 (440)
Q Consensus 191 ~~~~~~~~e~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~ 262 (440)
+..++..||.++...+. + ....++.++.++++++++.+..+.+..++..-+..+... ....| +.++ .+..+
T Consensus 214 iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~-~~~~fg~~~~gls~~~lll 292 (438)
T COG2270 214 LPMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILA-MGGVFGAADLGLSSTELLL 292 (438)
T ss_pred hHHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHH-HHHHHHHHHcCccHHHHHH
Confidence 66666666665432111 0 012344566788889999999888888888888776655 34444 2444 56666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432 263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV 342 (440)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 342 (440)
+.....+..++|+++.|++.|| ++.|+++..+.+...+.++.. .+...+. .....-.+.+...|..+..
T Consensus 293 ~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~-~~~~~~~---------~f~i~gll~g~s~G~~qA~ 361 (438)
T COG2270 293 IGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYL-IFLEGEL---------DFWILGLLVGTSLGGAQAS 361 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHH-HHccccH---------HHHHHHHHHHHhcchHHHH
Confidence 7777788899999999999997 999999988888777766544 2211111 1122223556678889999
Q ss_pred HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
..++..+.+|+++.++.+|+++..+...+.++|.++ +...+...+.+..+....++..++.+.....+
T Consensus 362 SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv---~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 362 SRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV---AVITQITGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH---HHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence 999999999999999999999999999999999976 33444233456666666666666655544443
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.71 E-value=5.2e-15 Score=134.89 Aligned_cols=363 Identities=14% Similarity=0.084 Sum_probs=224.7
Q ss_pred hhhhhHhhhHhhcC----CChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhccc--chhHH
Q psy10432 33 IQGPYVYKVYKDYG----YDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFS--SDFYI 104 (440)
Q Consensus 33 ~~~~~~~~~~~~~g----~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~--~~~~~ 104 (440)
+..+....++.+++ .++++...++.......-+...++|+++||+ |+|+.+..|.++..++ ++.+.+ .+...
T Consensus 40 mraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~g 119 (498)
T COG3104 40 MRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGG 119 (498)
T ss_pred hHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccH
Confidence 34444444454554 8888877666666666666667999999995 9999999999999999 766666 47888
Q ss_pred HHHHHHHHHHHHhhhccccchhhhccccccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHH
Q psy10432 105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVE--WLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVA 182 (440)
Q Consensus 105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 182 (440)
++++-.+.++|.|..-|...+++. |.+|++ +|...++++.++.++|++++|.+.+++.+.+|| ...|..+
T Consensus 120 l~i~L~~I~iG~Gl~K~NiS~llg------~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~--~~gF~~a 191 (498)
T COG3104 120 LYIGLALIIVGTGLFKPNISSLLG------ELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGW--HVGFGLA 191 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHH------HhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCH--HHHHHHH
Confidence 999999999999999998888888 888877 467789999999999999999999999999999 8888777
Q ss_pred HHHHHHHHHHHHHhccccCC-----CCCccCCC-Cccch---------hh-------------------------hhhhh
Q psy10432 183 IPFLLGSTLFIYFCWEEHYD-----PKTAKSSL-LPNSM---------FS-------------------------SLKFL 222 (440)
Q Consensus 183 ~~~~~~~~~~~~~~~~e~~~-----~~~~~~~~-~~~~~---------~~-------------------------~~~~~ 222 (440)
++-.....+..+. .+.... +++.+.+. ..... .. -+.+.
T Consensus 192 avGm~~gl~~f~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~ 270 (498)
T COG3104 192 AVGMIIGLVIFLL-GRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEA 270 (498)
T ss_pred HHHHHHHHHHHHH-ccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666544443332 232111 11110000 00000 00 00011
Q ss_pred ccC-------cchHHHHHHHHHHHhHHHHHHHhhhhh---h----hccC-----CchhhHHHHHHHHHHHHHHHHHHHHh
Q psy10432 223 FTN-------PCLLTLGIVQSIYEGIMYTFIFVWTPV---L----EVLS-----PPLGLVFSCFMISIMIGSKIYSILIL 283 (440)
Q Consensus 223 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~-----~~~g~~~~~~~~~~~~~~~~~g~l~~ 283 (440)
+++ ++.+..+. .++....++......+.. + .+++ ...++..+.+.+..++.+++..++..
T Consensus 271 ~~~~~~~~er~r~~~~~~-Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~ 349 (498)
T COG3104 271 FRSPKVFDERRRLLAAIP-LFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWT 349 (498)
T ss_pred hccCccHHHHHHHHHHHH-HHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHh
Confidence 111 12222111 111111122111111111 1 1111 45678888889998888888888776
Q ss_pred hccCCc-------hhHHHHHHHHHHHHHHHHHh---hhc-cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCc
Q psy10432 284 KYFKPE-------TMLTLTVYLATFSITVSTVL---TSS-LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIP 352 (440)
Q Consensus 284 r~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p 352 (440)
| .+++ .....+..++..+++.+... ... .+..... ..+..+.+..++.=+..|...+.+.+..|
T Consensus 350 ~-l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~----~lil~y~l~s~gEL~iSpvGLs~~t~laP 424 (498)
T COG3104 350 K-LGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVW----WLVLSYVLQSFGELFISPVGLSMVTKLAP 424 (498)
T ss_pred H-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHH----HHHHHHHHHHHHHHHhCHHHHHHHHHhCh
Confidence 4 2222 12345555555555554222 111 1111111 35566666666677788999999999999
Q ss_pred chhhHHHHHHhhhhhhhHHHHHHHHhhc---cccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 353 EKARATITNWLRVPTNFITCFTLIFIKN---EDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 353 ~~~~g~~~g~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
+...+.+++..-.....+..++..+... .+...+ .......|..++...++.......
T Consensus 425 ~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~-~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 425 PALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYT-AFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhceecccccccchhhh-hhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999998888877777777652210 011222 445566777777666655554433
No 119
>KOG2325|consensus
Probab=99.66 E-value=8.7e-15 Score=134.90 Aligned_cols=369 Identities=15% Similarity=0.097 Sum_probs=210.6
Q ss_pred HHHHhhhhhHhhhHhh--cCCChhhHHHHHHHHHHHHhhhhccccccccccch-hHHHHHHhHHHHHh-hhh-cc---cc
Q psy10432 29 FSDWIQGPYVYKVYKD--YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGR-KLICISYGIVYTLC-CLT-KF---SS 100 (440)
Q Consensus 29 ~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~-~~~-~~---~~ 100 (440)
...++..+-..+..++ .+.+.+..|++.+...+...+..|..|++..|.+. |+.++.+.++..++ ++. .+ .+
T Consensus 48 v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~ 127 (488)
T KOG2325|consen 48 VQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPN 127 (488)
T ss_pred hhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhccc
Confidence 3344455544444455 77788889998888888788888999999999996 88899999999998 554 22 23
Q ss_pred -hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--c-----
Q psy10432 101 -DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL--N----- 172 (440)
Q Consensus 101 -~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--g----- 172 (440)
.-+.++++|++.|+|.+.. . ..++++++....++|.|+++....+..+|.++||.++..+.... |
T Consensus 128 ~~~y~mL~~R~l~Gvg~~n~-a------~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~ 200 (488)
T KOG2325|consen 128 GVKYLMLVARILTGVGVGNF-A------VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILP 200 (488)
T ss_pred chHHHHHHHHHHcCcCcccH-H------HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcC
Confidence 5688899999999998775 2 46667779888999999999999999999999999887764321 1
Q ss_pred ---c-CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchh---hhhhhhccCcchHHHHH-HHHHHHhHHHH
Q psy10432 173 ---L-GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMF---SSLKFLFTNPCLLTLGI-VQSIYEGIMYT 244 (440)
Q Consensus 173 ---w-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 244 (440)
| .+..+-++..++.++..+.+.+..+|.+++.++++..+.++.+ +..+...-+......++ ..+........
T Consensus 201 ~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~ 280 (488)
T KOG2325|consen 201 GLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATT 280 (488)
T ss_pred cceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccchhhhccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 1 2245666777777777777777888877655433211111111 11111111111111111 11111222221
Q ss_pred HHHhhhhhh-hccC-------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHh--hhc--
Q psy10432 245 FIFVWTPVL-EVLS-------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVL--TSS-- 312 (440)
Q Consensus 245 ~~~~~~~~~-~~~~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 312 (440)
..+..++.. ..++ ...|...+..++..+.-.+......-+++.+|+.+..+........... .+ ...
T Consensus 281 iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~-~yp~~~~s~ 359 (488)
T KOG2325|consen 281 IETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIF-TYPWGFYSG 359 (488)
T ss_pred HHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhhee-eeecccccc
Confidence 122223332 2222 3334444444444443333333333112344555554433333333222 11 000
Q ss_pred cccchhhcc--------------hhHHHHH-HHHHHHhhhchhh----hHHhHhccCCcchhhHHHHHHhhhhhhhHHHH
Q psy10432 313 LFDSRRVLS--------------TNLCFVA-FLIYEISVGMYCP----VTGYLRGRIIPEKARATITNWLRVPTNFITCF 373 (440)
Q Consensus 313 ~~~~~~~~~--------------~~~~~~~-~~~~~~~~g~~~~----~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 373 (440)
+-....... .....+. +..+....|...| ...++-+|...++++++..|+++.....+..+
T Consensus 360 pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~ 439 (488)
T KOG2325|consen 360 PVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVV 439 (488)
T ss_pred ccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhh
Confidence 000000000 0000000 1111223444444 56778888999999999999999999999999
Q ss_pred HHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432 374 TLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409 (440)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (440)
+|.+. ..... ..|++..+.+..+..++.....
T Consensus 440 ~~~~~---t~~~~-~~g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 440 GPIFS---TAIFT-LSGPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred hHHHH---hhhHH-hcCccHHHHHHHHHHHHHHHHH
Confidence 99854 22333 5566777776665555544433
No 120
>KOG2816|consensus
Probab=99.65 E-value=4.9e-14 Score=131.81 Aligned_cols=297 Identities=11% Similarity=0.076 Sum_probs=198.4
Q ss_pred HHHHhhhhccccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccc
Q psy10432 60 FASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV 139 (440)
Q Consensus 60 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (440)
.....+.+|..|.++||+|||..+........+...+.....+|.++ +.++..+.... .....++++|...+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~----~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAI----FSVGFAYVADISSE 143 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhh----hhhhhhheeeccch
Confidence 44555666899999999999999999988888873222222344433 44444333211 12344455599999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCcc---------CCC
Q psy10432 140 EWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAK---------SSL 210 (440)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---------~~~ 210 (440)
++|...+|+.+.....+..++|.+++.+.+..|. ...|.+......+..+.....+||+..+++++ +..
T Consensus 144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~--a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~ 221 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI--ALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSL 221 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcc
Confidence 9999999999999999999999999999999887 88899999888888888888999987655443 111
Q ss_pred Cccchhhhh---hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-----hccCCchhhHHHHHHHHHHHHHHHHH-HH
Q psy10432 211 LPNSMFSSL---KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-----EVLSPPLGLVFSCFMISIMIGSKIYS-IL 281 (440)
Q Consensus 211 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~g-~l 281 (440)
......+.+ +....+|..+.+.+...+.......-..-..+++ +....+.+.+.+..+....++..+.. .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l 301 (463)
T KOG2816|consen 222 DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLL 301 (463)
T ss_pred cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111112222 2222344444444444333322211101011222 22226677777777777778876666 55
Q ss_pred HhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHH
Q psy10432 282 ILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITN 361 (440)
Q Consensus 282 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g 361 (440)
... ++.++.+..+.....+..... .+.... | ..+.........+...|...+.....++++++|++++
T Consensus 302 ~~~-l~~~~~i~lGl~~~~~~~~~~-af~~~~---w-------~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~ 369 (463)
T KOG2816|consen 302 SSI-LGEKRLISLGLLSEFLQLLLF-AFATET---W-------MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFG 369 (463)
T ss_pred HHH-HhhhhHhhHHHHHHHHHHHHH-HHhccc---h-------hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhh
Confidence 554 788887777777766665444 322222 2 2333334444577789999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHh
Q psy10432 362 WLRVPTNFITCFTLIFI 378 (440)
Q Consensus 362 ~~~~~~~~g~~~~~~~~ 378 (440)
+...+..+...++|.++
T Consensus 370 ~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 370 IISGIEGLSGVVSPALY 386 (463)
T ss_pred HHHHHHHHhhhhhHHHH
Confidence 99999999999999865
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.61 E-value=9e-14 Score=131.04 Aligned_cols=367 Identities=11% Similarity=0.039 Sum_probs=209.4
Q ss_pred HhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-----hhHHHHHHhHHHHHh-hhhcc----cchhHHHHH
Q psy10432 38 VYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-----RKLICISYGIVYTLC-CLTKF----SSDFYILLY 107 (440)
Q Consensus 38 ~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~~~~-~~~~~----~~~~~~l~~ 107 (440)
.+-+.+++|+++++.+....+..+... ..|+.|.++|.+- ||+-++++.++..++ ...+. ..+.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 334458899999999887766666544 3589999999762 444456666666444 22222 345666677
Q ss_pred HHHHHHHHHhhhccccchhhhcccccccccc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHH
Q psy10432 108 GRLFGGIATSILFSGFESWYVNEHLNYYLFP--VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPF 185 (440)
Q Consensus 108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~ 185 (440)
.-++..+|........++.+. |... +++|+...+.......+|.+++..++|.+.+..++ +..|.+...+
T Consensus 92 ~l~la~~g~a~~DV~aDa~vv------E~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~--~~~f~i~~~~ 163 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVV------ELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP--QGVFLISAAL 163 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHH------HHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC--eEEehHHHHH
Confidence 778888999998777777777 5542 23478888899999999999999999999998877 6667666655
Q ss_pred HHHHHHHHHHhccccCCCCCcc-----CC--CC----ccchhhhhhhhccCcchHHHHH-HHHHHHhHHHHH---HHhhh
Q psy10432 186 LLGSTLFIYFCWEEHYDPKTAK-----SS--LL----PNSMFSSLKFLFTNPCLLTLGI-VQSIYEGIMYTF---IFVWT 250 (440)
Q Consensus 186 ~~~~~~~~~~~~~e~~~~~~~~-----~~--~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~ 250 (440)
..+..+...+..+|+++.++.+ ++ .. .++.....++.+++|.++...+ ..++........ ..++.
T Consensus 164 ~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~ 243 (433)
T PF03092_consen 164 PLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQ 243 (433)
T ss_pred HHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEE
Confidence 5555444455555522111110 00 00 1222334556666777776555 222211111000 00000
Q ss_pred -hhhh---ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432 251 -PVLE---VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF 326 (440)
Q Consensus 251 -~~~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (440)
+..+ ......+.+.....++.++|..+..+...+ .+-|+.+....+...+..+.-..+....+.....|.....+
T Consensus 244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 244 TDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred eccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 0001 111344555666667777787777777765 67777766665555443332211111111001000000111
Q ss_pred HHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh----hccccccCccchhhHHHHHHHHHH
Q psy10432 327 VAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI----KNEDAEGGKLIAIHSVFVVCTACL 402 (440)
Q Consensus 327 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 402 (440)
..-.+.....++.+-....+..|..|+...|+.+++...+.|+|..++..+- ...+.-.+...+.....+++.++.
T Consensus 323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ 402 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ 402 (433)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 1112233335554555567888999999999999999999999888777521 111211111233455566666666
Q ss_pred HHHHHHHHHhhh
Q psy10432 403 LVALLASCVFKR 414 (440)
Q Consensus 403 ~~~~~~~~~~~~ 414 (440)
++...+...+++
T Consensus 403 ll~l~ll~lLp~ 414 (433)
T PF03092_consen 403 LLPLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHcCC
Confidence 666555555554
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.52 E-value=9.9e-14 Score=110.09 Aligned_cols=127 Identities=20% Similarity=0.342 Sum_probs=107.4
Q ss_pred hhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhh
Q psy10432 65 IFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLN 143 (440)
Q Consensus 65 l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 143 (440)
+.+++.|++.||+|||+.+..+.....++ ......++++.+.+.+++.|++.+...+...+++. |..|+++|+
T Consensus 13 ~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~ 86 (141)
T TIGR00880 13 IYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIA------DIYPPEERG 86 (141)
T ss_pred HHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHH------HHCChhhhh
Confidence 33469999999999999999988888887 66677789999999999999999998777777777 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432 144 LTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEE 199 (440)
Q Consensus 144 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e 199 (440)
+..+..+....+|..++|.+++.+.+..+| +..+........+..+...+..||
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGW--RAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccch--HHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988888 777777766666555555555554
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.51 E-value=4.9e-13 Score=126.34 Aligned_cols=164 Identities=10% Similarity=0.121 Sum_probs=123.8
Q ss_pred hhhHhhhHhhcCCCh--------hhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-c---h
Q psy10432 35 GPYVYKVYKDYGYDE--------KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-S---D 101 (440)
Q Consensus 35 ~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~---~ 101 (440)
..+.+...++.|.++ ++.+...++......+..++.|+++||+|||+++..+.++.+++ ++.... + +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344444456666443 45566666666666666679999999999999999999988887 444432 2 2
Q ss_pred hHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcc----cCch
Q psy10432 102 FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILN----LGPI 176 (440)
Q Consensus 102 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g----w~~~ 176 (440)
++.+++.+++.|++.+...+....++. |.+|+++|++.+++.+ ...++|..+||.++|.+.++.| +.|+
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~------~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~ 381 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVE------KEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQ 381 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchH
Confidence 456778899999999888776666666 9999999999999997 6788999999999999999853 2338
Q ss_pred hhHHHHHHHHHHHHHHHHHhccccCCCC
Q psy10432 177 APFAVAIPFLLGSTLFIYFCWEEHYDPK 204 (440)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 204 (440)
..|.+.+...++..++..+++||+.++.
T Consensus 382 ~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 382 TMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 8887777777777777777888875443
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.47 E-value=2.2e-12 Score=121.80 Aligned_cols=154 Identities=18% Similarity=0.216 Sum_probs=115.0
Q ss_pred hhhhHhhhHhhcCCChhhHHH-HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIAL-LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF 111 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 111 (440)
...+++..+++.|.+...... .+.++...+. ++.|++.||+||||.+..+..+.+++ .+..+.++.+.+++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 235 IATFITLYYAARGWDGAALALTLFGVAFVGAR---LLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHHHcccccchHHHHHHHHHHHHHH---HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 445555555666654322211 3334444443 58999999999999998888887777 566667888888889999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
.|++.+...|....... |..|+++|+++.++.+....+|..++|.+.+.+.++.|| +..+...+...++..+
T Consensus 312 ~G~~~~~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~ 383 (399)
T PRK05122 312 TGFGFSLVFPALGVEAV------KRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGY--PSIFLAAALAALLGLA 383 (399)
T ss_pred HHHhHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHH
Confidence 99999988776555566 889999999999999999999999999999999999888 7777777666665554
Q ss_pred HHHHhccc
Q psy10432 192 FIYFCWEE 199 (440)
Q Consensus 192 ~~~~~~~e 199 (440)
...+ +++
T Consensus 384 ~~~~-~~~ 390 (399)
T PRK05122 384 LTWL-LYR 390 (399)
T ss_pred HHHH-hcc
Confidence 4443 344
No 125
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=4.8e-12 Score=120.08 Aligned_cols=162 Identities=12% Similarity=-0.019 Sum_probs=124.7
Q ss_pred hhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432 35 GPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG 112 (440)
Q Consensus 35 ~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~ 112 (440)
....|...++ +|.++.+.+++.........+..++.|++.||.++++.+..+..+.+++ .+..+.++.+...++.++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 3445555565 8999888888666555555555569999999988888888888777777 5667788888888888999
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 192 (440)
|++.+...+...+.+. |..|+++|++++++......+|..+||.+.|.+.+.+|. +..+...+....+..++
T Consensus 323 g~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~--~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 323 GYLSAISSLLQYTLLQ------TQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTP--VASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHHHHHHHHH------hhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhch--hhHHHHHHHHHHHHHHH
Confidence 9988877555445555 999999999999999999999999999999999999887 66666666655555555
Q ss_pred HHHhccccCCCC
Q psy10432 193 IYFCWEEHYDPK 204 (440)
Q Consensus 193 ~~~~~~e~~~~~ 204 (440)
....+||.++.+
T Consensus 395 ~~~~~~~~~~~~ 406 (417)
T PRK10489 395 LLLVLGELRRFR 406 (417)
T ss_pred HHHhcccccccc
Confidence 566667765433
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.42 E-value=5.4e-12 Score=118.65 Aligned_cols=156 Identities=16% Similarity=0.088 Sum_probs=114.3
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF 111 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 111 (440)
.....|... +++|.++.+.+.+.........+..++.|+++||+|||+.+..+.....+. ......++.+.+++.+++
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 334454444 568999988888766655555555579999999999999887776655554 334456777888888988
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
.+++.+...+....... |..|+ +|+++.++.+...++|..+||.++|.+.+++|| +..+.+.....++..+
T Consensus 315 ~~~~~g~~~~~~~~~~~------~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~--~~~~~~~~~~~~~~~~ 385 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQ------DLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY--HAVFWFALVMIIATLF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHH------HhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHH
Confidence 88877776554444444 77764 699999999999999999999999999998888 7777776666554444
Q ss_pred HHHHhccc
Q psy10432 192 FIYFCWEE 199 (440)
Q Consensus 192 ~~~~~~~e 199 (440)
. .+..||
T Consensus 386 ~-~~~~~~ 392 (393)
T PRK15011 386 C-LLRIKD 392 (393)
T ss_pred H-HHhhcC
Confidence 3 334454
No 127
>PRK12382 putative transporter; Provisional
Probab=99.42 E-value=6.2e-12 Score=118.35 Aligned_cols=153 Identities=16% Similarity=0.172 Sum_probs=116.3
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG 112 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~ 112 (440)
...+.+...++.|.+.. +...........+..++.|++.||+||||.+..+..+..++ .+..+.++.+.+++..++.
T Consensus 235 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 235 IGTFVSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred HHHHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 44555555566666543 33222222233334469999999999999999888888887 5666678888888899999
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 192 (440)
|++.+...|...+.+. |..|+|+|+++.++.+....+|..+||.+.+.+.++.|| +..|...+...++..+.
T Consensus 313 g~~~~~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 313 GAGCSLIFPALGVEVV------KRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGY--PSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHhHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--hHHHHHHHHHHHHHHHH
Confidence 9999887776666666 889999999999999999999999999999999999999 77777777666655554
Q ss_pred HHHh
Q psy10432 193 IYFC 196 (440)
Q Consensus 193 ~~~~ 196 (440)
.++.
T Consensus 385 ~~~~ 388 (392)
T PRK12382 385 TILS 388 (392)
T ss_pred HHhh
Confidence 4433
No 128
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.42 E-value=2.6e-10 Score=103.73 Aligned_cols=321 Identities=12% Similarity=0.135 Sum_probs=217.4
Q ss_pred hhHhhhH--hhcCCChhhHHH----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 36 PYVYKVY--KDYGYDEKNIAL----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 36 ~~~~~~~--~~~g~s~~~~~~----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
|++.+.. .+.|.+..|+.- ..+-+++...+ +...+.|..+.|++++++.+...+. .+..+.++...+-+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~---~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~ 100 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLL---PVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLM 100 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHH
Confidence 4444444 347889888874 44555565555 8899999999999999999988888 778888999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
.+..|++.+.. .+..+++- ...|+++..++.+...+..-+|..++.++|..+...-+.++.....+......+
T Consensus 101 q~~yg~~~a~e-vay~sYiy------s~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~ 173 (412)
T PF01770_consen 101 QFFYGLATAAE-VAYYSYIY------SVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSL 173 (412)
T ss_pred HHHHHHHHHHH-HHHHHHhe------eecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 99999999886 44444444 888999999999999999999999999999988886555546665665554443
Q ss_pred HHHHHHHhccccCCC----C-------------Cc--c-CCC------C----c-------cchhhhhhhhccCcchHHH
Q psy10432 189 STLFIYFCWEEHYDP----K-------------TA--K-SSL------L----P-------NSMFSSLKFLFTNPCLLTL 231 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~----~-------------~~--~-~~~------~----~-------~~~~~~~~~~~~~~~~~~~ 231 (440)
..+ ..+++|.+++. + ++ + ++. . . +...+.++...+||.++..
T Consensus 174 a~~-~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~W 252 (412)
T PF01770_consen 174 ALL-IALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLW 252 (412)
T ss_pred HHH-HHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHH
Confidence 333 33455654320 0 00 0 000 0 0 0112345566788999888
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhhcc------CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHH
Q psy10432 232 GIVQSIYEGIMYTFIFVWTPVLEVL------SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITV 305 (440)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 305 (440)
.+-..+...+.+-..++.+...+.. ....|.+-+...+.+.++++..|++..+ +.+..-+.++.....-+.++
T Consensus 253 SlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~-w~~~~~l~l~~~S~l~a~~L 331 (412)
T PF01770_consen 253 SLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVN-WDRWGELALGVFSLLQAGLL 331 (412)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcc-hHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777777677666333 1556788888888888899999998554 55544444444333323222
Q ss_pred HHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 306 STVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
+ . ....+..| ....+..++.....+..+....-+.+....|.-|.++|+..+..-+-..+-..
T Consensus 332 ~-l-m~~t~~Iw------v~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~ 394 (412)
T PF01770_consen 332 F-L-MSFTGNIW------VCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTL 394 (412)
T ss_pred H-H-HHHhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence 2 1 11111112 45666667666677777777777777778888899999888776655555444
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.42 E-value=2.7e-12 Score=121.59 Aligned_cols=158 Identities=14% Similarity=0.122 Sum_probs=118.1
Q ss_pred hhhhHhhhHhhcCCChhh----HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKN----IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
..+..+...++.+.+..+ .+.+..+..+...+..+..|+++||+|||+.+..+..+..++ ....+.++.+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 445554444444333332 223333333444455578999999999999998888877776 556666788888899
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
+++.|++.+...|...+.+. +..|+++|++.+++.+....+|..+||.++|.+.+..|| +..|.+.+.+.++
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~--~~~f~~~~~~~l~ 389 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLV------YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGF--RAVFLVTAGVVLF 389 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHH------HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcch--hHHHHHHHHHHHH
Confidence 99999999998777666666 888999999999999999999999999999999999888 8888888777766
Q ss_pred HHHHHHHhccc
Q psy10432 189 STLFIYFCWEE 199 (440)
Q Consensus 189 ~~~~~~~~~~e 199 (440)
..++.++..++
T Consensus 390 ~~~~~~~~~~~ 400 (408)
T PRK09874 390 NAVYSWNSLRR 400 (408)
T ss_pred HHHHHHHHHHH
Confidence 66655544433
No 130
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.41 E-value=5.7e-12 Score=119.20 Aligned_cols=154 Identities=12% Similarity=0.085 Sum_probs=115.8
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG 112 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~ 112 (440)
...+.|.+.++.|.++.+.+.......+...+..++.|+++||+|||+.+..+.....++ .+..+.++.+.+.+..++.
T Consensus 239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 344566666888999988888776666666666679999999999999988876666666 4555667777777788888
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 192 (440)
|++.+...+...++.. |.+|+++|++..|+.+....+|..+||.++|.+.++.++ +...+.......++..+.
T Consensus 319 g~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 319 GLFVVGGQSVLYALAP------LFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRS-TVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHHHhHHHHHHHHHH------HHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCc-hHHHHHHHHHHHHHHHHH
Confidence 8887776666666666 999999999999999999999999999999999887543 144444444444433333
Q ss_pred HH
Q psy10432 193 IY 194 (440)
Q Consensus 193 ~~ 194 (440)
.+
T Consensus 392 ~~ 393 (406)
T PRK11551 392 AL 393 (406)
T ss_pred HH
Confidence 33
No 131
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.40 E-value=1.8e-11 Score=114.67 Aligned_cols=146 Identities=12% Similarity=0.024 Sum_probs=112.0
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG 112 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~ 112 (440)
...++|...++.|.++++.+...........+.+++.|++.||+|+|+.+..+.....++ +... + ........++.
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 345566666778999888888666666666666679999999999999998887777776 3322 2 23344567788
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 190 (440)
|++.....|...+++. |..|+++++...+......++|..+||.++|++.|++|| +..|.+.+...++..
T Consensus 296 g~~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~--~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 296 GAAGFTLYPVAMAWAC------EKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD--NLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHhHHHHHHHHHH------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHH
Confidence 8877777787777777 989998888888888889999999999999999999888 777777666555443
No 132
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.39 E-value=2.9e-12 Score=121.66 Aligned_cols=150 Identities=13% Similarity=0.096 Sum_probs=116.9
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhcc
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFS 121 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 121 (440)
++.+.+..+.+.+.++......+..++.|+++||+|||+.+..+.++.+++ .+..++++.+.+++.+++.|++.+...+
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344666677787777666665566679999999999999999888888887 6777888999999999999998888755
Q ss_pred ccchhhhccccccccccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432 122 GFESWYVNEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH 200 (440)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~ 200 (440)
....++. |..|++.|+...+. .+....+|.+++|.+.|++.+.+|| +..|...+.+.++..++.++..+++
T Consensus 335 ~~~~~~~------~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~--~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 335 GVFKYIT------LNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF--QGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHH------HHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc--hHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5444555 88899888887665 5777889999999999999999998 8788776666555555545454443
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.39 E-value=1.4e-11 Score=115.33 Aligned_cols=148 Identities=9% Similarity=0.019 Sum_probs=122.6
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
+......+.+...+|+|.++.++|.++.++.....+..++.|++.||+|+|+.+.++.+...+. .+.+++++.+.+++.
T Consensus 220 ~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T TIGR00902 220 AHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLL 299 (382)
T ss_pred HHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHH
Confidence 3444556676666889999999999888877777777789999999999999999999999998 677889999999999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
++++|+..+...+....++. +. |+++|++..++++ ...++|..+||.++|.+.|++|+ . .|...+.+.+
T Consensus 300 q~l~g~~~~~~~~~~~~~i~------~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~--~-~~~~~~~~~~ 369 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIA------AQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA--G-TFVFMAIIAA 369 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH------hC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--H-HHHHHHHHHH
Confidence 99999999999887666665 87 8999999999986 57789999999999999999876 3 3444444444
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.38 E-value=1.4e-11 Score=122.25 Aligned_cols=129 Identities=16% Similarity=0.105 Sum_probs=104.0
Q ss_pred hhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhh
Q psy10432 64 MIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL 142 (440)
Q Consensus 64 ~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 142 (440)
.+..++.|+++||+|||++++.+.++.+++ ++.++.++...+++.+++.|++.+...+...++++ |++|.++|
T Consensus 609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a------El~Pt~~R 682 (742)
T TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV------ELYPSDKR 682 (742)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHcCHHHH
Confidence 333359999999999999999999999988 67778888888888888888888777676666666 99999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432 143 NLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYD 202 (440)
Q Consensus 143 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 202 (440)
++++|+.++...+|.++||.+++.+.+. +. ..++++.+++.++..++.. .+||+..
T Consensus 683 gta~Gi~~~~~rlGaiigp~i~g~L~~~-~~--~~pf~i~a~~lll~~ll~~-~LPET~~ 738 (742)
T TIGR01299 683 ATAFGFLNALCKAAAVLGILIFGSFVGI-TK--AAPILFASAALACGGLLAL-KLPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh--HHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence 9999999999999999999999988775 33 5677776666655554444 5687653
No 135
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.38 E-value=1.1e-11 Score=114.58 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=128.4
Q ss_pred HhhhhhHhhhHhhc-CCChhhHHHHHHHHHHHHhhhhccccccccccchhH-HHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 32 WIQGPYVYKVYKDY-GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKL-ICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 32 ~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~-~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
.......+...++. |.++.+.+...........+..++.|++.||+|||+ .+..+..+..++ ......++.+.+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVA 271 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 33445555555554 889999988777777777777789999999999999 999999888888 677778888899999
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
.++.|++.+...+...+++. |..|+++|++.++..+...++|..++|.+.+.+.+..+| +..+.+.....++
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~--~~~~~~~~~~~~i 343 (352)
T cd06174 272 LLLLGFGLGFAFPALLTLAS------ELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY--GGVFLILAALALL 343 (352)
T ss_pred HHHHHHHHhccchhHHHHHH------hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc--chHHHHHHHHHHH
Confidence 99999999999887777777 999999999999999999999999999999999988888 7777777776665
Q ss_pred HHHH
Q psy10432 189 STLF 192 (440)
Q Consensus 189 ~~~~ 192 (440)
..+.
T Consensus 344 ~~i~ 347 (352)
T cd06174 344 AALL 347 (352)
T ss_pred HHHH
Confidence 5443
No 136
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.38 E-value=4.6e-12 Score=118.50 Aligned_cols=144 Identities=14% Similarity=0.023 Sum_probs=112.0
Q ss_pred hhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchh--HHHHHHHHHH
Q psy10432 36 PYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDF--YILLYGRLFG 112 (440)
Q Consensus 36 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~--~~l~~~r~l~ 112 (440)
...++..+++|.++++.+....+......+..++.|+++||+|||+.+..+..+..++ .+..+.++. ..++...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 3444555788888888877666666666666679999999999999998888888777 445555432 3345567788
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
|++.+...+...+++. |.+|+++|+++.|+.+....+|..++|.+.+.+.+..|| +..|.+.+...+
T Consensus 306 g~~~g~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~f~~~~~~~~ 372 (377)
T TIGR00890 306 FFTWGGTISLFPSLVS------DIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGF--EYTFIVTGAFAL 372 (377)
T ss_pred HHHhccchhccHHHHH------HHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch--hhHHHHHHHHHH
Confidence 8888776555555555 999999999999999999999999999999999999898 777766655544
No 137
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.37 E-value=1.5e-11 Score=115.13 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=112.8
Q ss_pred hhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHH
Q psy10432 36 PYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGG 113 (440)
Q Consensus 36 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G 113 (440)
...|... +++|.++.+.+..............++.|++.||+|||+.+..+.+...+. ....+.++.+.+.+.+++.|
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443 678999999888766655555555579999999999999988877665555 34455677888888899999
Q ss_pred HHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432 114 IATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 192 (440)
++.+...+...++.. |..|+ +++++.++.+....+|..++|.+++.+.+..|| +..+...++..++..+.
T Consensus 300 ~~~g~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~--~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 300 IFIGILAGIGMLYFQ------DLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSY--HAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHHHHHHH------HhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHH
Confidence 998887665555555 77765 567999999999999999999999999999888 77777766665544443
No 138
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.37 E-value=4.6e-11 Score=115.65 Aligned_cols=161 Identities=17% Similarity=0.152 Sum_probs=107.6
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h--h-hcccchhHHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C--L-TKFSSDFYILLYG 108 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~--~-~~~~~~~~~l~~~ 108 (440)
...+.|.+. +++|.+..+.+.......+...+..+..|+++||+|||+.+..+.+...+. . . ...+++...++++
T Consensus 269 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (490)
T PRK10642 269 LLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAG 348 (490)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 445666665 567888776655444444444444578999999999999988877644432 2 1 2234567778888
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLL 187 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~ 187 (440)
+++.|++.+...+....++. |.+|++.|+++++.......++..++|.+.+++.+..+ | +.++.......+
T Consensus 349 ~~~~g~~~~~~~g~~~~~~~------~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~--~~~~~~~~~~~~ 420 (490)
T PRK10642 349 LLMLAVILNCFTGVMASTLP------AMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNL--MMPAYYLMVVAV 420 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHH
Confidence 99988877665454444555 89999999999998655556667889999998887644 4 555544444444
Q ss_pred HHHHHHHHhccccCCC
Q psy10432 188 GSTLFIYFCWEEHYDP 203 (440)
Q Consensus 188 ~~~~~~~~~~~e~~~~ 203 (440)
+..+ ..+++||+++.
T Consensus 421 i~~~-~~~~~pes~~~ 435 (490)
T PRK10642 421 IGLI-TGVTMKETANR 435 (490)
T ss_pred HHHH-HHHHhccccCC
Confidence 3333 34456998764
No 139
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=3.9e-11 Score=112.79 Aligned_cols=163 Identities=9% Similarity=-0.011 Sum_probs=115.5
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-ccchhHHHHHHHH
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-FSSDFYILLYGRL 110 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-~~~~~~~l~~~r~ 110 (440)
......|++.+++|.+..+.+....+......+..+..|++.||+|||+.+..+..+..++ .+.. ..++...+. -+
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~ 300 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AM 300 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HH
Confidence 3455666777788999988888666655555555679999999999999988887777776 3332 233322222 24
Q ss_pred HHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLLG 188 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~ 188 (440)
+.|++.+...|....... +..+ ++++++..+..+....++..++|.+.|++.+..| | ...+.+.....+.
T Consensus 301 l~g~g~g~~~~~~~~~~~------~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~--~~~~~~~~~~~~~ 372 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLAL------DHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNY--LMDWAFHALCVVG 372 (393)
T ss_pred HHHHhccchHHHHHHHHH------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHH
Confidence 567777776665444444 6664 6789999999999999999999999999999876 4 6666666655555
Q ss_pred HHHHHHHhccccCCCCC
Q psy10432 189 STLFIYFCWEEHYDPKT 205 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~ 205 (440)
.........||++++++
T Consensus 373 ~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 373 LMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHhccccccchh
Confidence 55555666677665443
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=99.34 E-value=4.5e-11 Score=112.38 Aligned_cols=153 Identities=13% Similarity=0.088 Sum_probs=112.9
Q ss_pred hhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hhcccchhHHHHHHHHHH
Q psy10432 36 PYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LTKFSSDFYILLYGRLFG 112 (440)
Q Consensus 36 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~r~l~ 112 (440)
.+.+++. ++.|.|..+.++++.+....+.+..++.|+++||+|||+.. .+..+..++ . +....++.+.+.+..++.
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 3444555 44788888888866665555566667999999999988754 444444444 2 344567788888889999
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 192 (440)
|++.+...+...+.+. +..| ++|++++++.+....+|..+||.++|.+.+++|+ +..+...+.+.++..+.
T Consensus 305 g~~~~~~~~~~~~~~~------~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~--~~~~~~~~~~~~~~~~~ 375 (390)
T PRK03545 305 GIAIMCIGLAMQVKVL------KLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGL--SSIGYVGAALALAALVW 375 (390)
T ss_pred HHHHhcchHHHHHHHH------HhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh--hHHHHHHHHHHHHHHHH
Confidence 9988776565555554 6655 6889999999999999999999999999999999 78887777776666665
Q ss_pred HHHhcc
Q psy10432 193 IYFCWE 198 (440)
Q Consensus 193 ~~~~~~ 198 (440)
.....+
T Consensus 376 ~~~~~~ 381 (390)
T PRK03545 376 SILIFR 381 (390)
T ss_pred HHHHcc
Confidence 555443
No 141
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.32 E-value=1.4e-08 Score=94.16 Aligned_cols=349 Identities=13% Similarity=0.103 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhHhhc-CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh-
Q psy10432 19 RYFIPFFLATFSDWIQGPYVYKVYKDY-GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL- 95 (440)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~- 95 (440)
+.....+++..++-+..-..+-+..+. .-+---.+..-..-.+...+++|..|.+.||..|+++...+.+..-++ .+
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s 85 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAAS 85 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHH
Confidence 344444555555555544443333333 223222323333444455666789999999999999876665544332 11
Q ss_pred -----hccc--c----hhHH---HHHHHHHHHHHHhhhccccchhhhccccccccc------cchhhhHHHHHHHHHHHH
Q psy10432 96 -----TKFS--S----DFYI---LLYGRLFGGIATSILFSGFESWYVNEHLNYYLF------PVEWLNLTFARATFGSGL 155 (440)
Q Consensus 96 -----~~~~--~----~~~~---l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~ 155 (440)
..+. + +-+. +++.-.+.|.-.-.. ... ..-++-+||. +++++.+.++...-.-.+
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La-s~~----~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 86 CALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA-SIA----NTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH-Hhh----hhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 1111 1 1121 222222222222222 111 1222333542 466788889999999999
Q ss_pred HHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhc-------ccc---CCCCCccCCCC---------c----
Q psy10432 156 FAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCW-------EEH---YDPKTAKSSLL---------P---- 212 (440)
Q Consensus 156 g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-------~e~---~~~~~~~~~~~---------~---- 212 (440)
.-+++|++.|.+.+..+. +....+.++..++...+=++.+ |+- +++++++.+.+ .
T Consensus 161 ckllaPl~vG~l~t~~s~--~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASP--VIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSIL 238 (432)
T ss_pred HHHHHHHHHHHHhhccCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHH
Confidence 999999999999998776 5555555555544444333222 221 11110000000 0
Q ss_pred -------cchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh---ccCCchhhHHHHHHHHHHHHHHHHHHHH
Q psy10432 213 -------NSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE---VLSPPLGLVFSCFMISIMIGSKIYSILI 282 (440)
Q Consensus 213 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 282 (440)
+...++|+..+++|.++. .+...+.+.....+-.....+.. ..+...|..-+...+.++.|+++..++.
T Consensus 239 ~~~~~~~~~~~~~w~~Y~~q~vfla-s~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~ 317 (432)
T PF06963_consen 239 KRLWNPLRTIIRGWRTYFRQPVFLA-SFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLM 317 (432)
T ss_pred HHHHHHHHHHhccHHHHHhCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111234555566665444 33333333333333222233332 2236678888888899999999999999
Q ss_pred hhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH
Q psy10432 283 LKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW 362 (440)
Q Consensus 283 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~ 362 (440)
+| +|..|.-.++......+..........+..+.........+.+..+.-++.=.+=....-+++|.+|+++||+..|+
T Consensus 318 ~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv 396 (432)
T PF06963_consen 318 KR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV 396 (432)
T ss_pred HH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence 97 99999877777655544333211111111110010001223333333322222334667888999999999999999
Q ss_pred hhhhhhhHHHHHHH
Q psy10432 363 LRVPTNFITCFTLI 376 (440)
Q Consensus 363 ~~~~~~~g~~~~~~ 376 (440)
-+...++...+.-.
T Consensus 397 q~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 397 QNSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888777665
No 142
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.6e-11 Score=108.39 Aligned_cols=144 Identities=15% Similarity=0.092 Sum_probs=118.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.|.+.+...+..-++.++.|.++|| .++|+.+..+++++++..+++.. .. .+....+...+.+...|
T Consensus 64 ~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gf-s~---------s~~~~~~l~~lng~fQg 132 (448)
T COG2271 64 TQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGF-SP---------SLFLFAVLWVLNGWFQG 132 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhh-hh---------HHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999998 99999999999999998877622 11 11134455557788899
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
..+|.....+....|+++||+..++.|+..|+|+.+.|.+..- +...+ +.+++..|++-+++.++..++.+...|
T Consensus 133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~-~~~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAF-HGGWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHh-ccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999885522 44555 668999999999888777776666555
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.28 E-value=9.7e-11 Score=113.27 Aligned_cols=159 Identities=16% Similarity=0.142 Sum_probs=109.0
Q ss_pred hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc---c--cc------hh
Q psy10432 35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK---F--SS------DF 102 (440)
Q Consensus 35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~---~--~~------~~ 102 (440)
..+.+.+.+++|.+..+.++..........+..++.|+++||+|||+.+..+..+..++ .+.. . .+ +.
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 33455556888988877766666666666666679999999999999998887777666 3332 1 12 22
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHH
Q psy10432 103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVA 182 (440)
Q Consensus 103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~ 182 (440)
..+....+..+.......+.....+. |.+|+++|++++++.+....+|.+++|.+.+.+.++.+| +..|++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~--~~~f~~~ 455 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVPWVIVS------EIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGV--GGVFIFF 455 (481)
T ss_pred HHHHHHHHHHHHHHccccCeehhhhh------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cceehhH
Confidence 22333333322222222243333444 999999999999999999999999999999999998888 6666666
Q ss_pred HHHHHHHHHHHHHhccccC
Q psy10432 183 IPFLLGSTLFIYFCWEEHY 201 (440)
Q Consensus 183 ~~~~~~~~~~~~~~~~e~~ 201 (440)
+.+.++..+...+..||++
T Consensus 456 ~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 456 GGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHheecccCC
Confidence 6666655555555666654
No 144
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.26 E-value=3.4e-11 Score=115.27 Aligned_cols=148 Identities=15% Similarity=0.032 Sum_probs=113.0
Q ss_pred hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc--chhHHHHH--HhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF--GRKLICIS--YGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l~~--~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
..++++..+++|.+..+.+.+.++..+...+..++.|+++||. ++|+...+ +....+++ .+....++++.+++.+
T Consensus 261 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 261 IIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 3455666678899999998877777777777778999999983 44443333 33333444 3556678888889999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~ 188 (440)
++.|++.+...+...+.+. |.+|++++++.+++.+...++|..+||.++|.+.+.. +| +..|.+.+++.++
T Consensus 341 ~~~G~~~g~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~--~~~f~~~~~~~li 412 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLM------DLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY--KYIFYASGSIVVS 412 (455)
T ss_pred HHHHHHhchHHHHHHHHHH------HHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCc--chHHHHhhHHHHH
Confidence 9999999888776666666 9999999999999999999999999999999999877 47 6666666555444
Q ss_pred HH
Q psy10432 189 ST 190 (440)
Q Consensus 189 ~~ 190 (440)
..
T Consensus 413 ~~ 414 (455)
T TIGR00892 413 AG 414 (455)
T ss_pred HH
Confidence 33
No 145
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.26 E-value=2.8e-10 Score=108.49 Aligned_cols=135 Identities=10% Similarity=0.050 Sum_probs=104.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..+++++.|++.|| +++|+.+..+.....++.+.. ... ...+ .......+.+++.|
T Consensus 58 ~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~---~~~~------~l~~~~~l~g~~~g 126 (434)
T PRK11663 58 SDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILF-GFS---SSLW------AFALLWVLNAFFQG 126 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHH-HHH---hHHH------HHHHHHHHHHHHHH
Confidence 678899999999999999999999998 999999888888777766544 221 1111 22333334556677
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
...+....++.+.+|+++|++++|+.+...++|..++|.+. +.+.+ ..+++..|.+.++..++..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 127 WGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVV---GAIAL-HYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred ccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-cccHHHHHHHHHHHHHHHHH
Confidence 77888889999999999999999999999999999999844 55666 77899999887766554433
No 146
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=8.4e-11 Score=114.34 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=101.7
Q ss_pred hhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc--cchhHHHHHHHH
Q psy10432 35 GPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF--SSDFYILLYGRL 110 (440)
Q Consensus 35 ~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~--~~~~~~l~~~r~ 110 (440)
..++|.+. +++|.+..+.+.+.........+..++.|+++||+|||+++..+..+..+. ..... .++.+.+.+..+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 34566666 588999999998777777766666689999999999999988877666655 32222 234444444555
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV 181 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~ 181 (440)
+.+.......+...+++. |.+|+++|++.+++......+|..+||.++|.+.+.+|| +..+..
T Consensus 375 ~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~--~~~~~~ 437 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIG------GYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDL--GTALAS 437 (496)
T ss_pred HHHHHhcccchhhHHHHH------hhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCCh--HHHHHH
Confidence 544443333344444445 999999999999999999999999999999999999888 555533
No 147
>PRK03699 putative transporter; Provisional
Probab=99.25 E-value=1.3e-10 Score=109.29 Aligned_cols=152 Identities=13% Similarity=-0.029 Sum_probs=111.8
Q ss_pred HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
......+.|.+. +++|.|+.+.+...+.......+..+..|+++||++||+.+.....+..+. .+....++.+.+.+.
T Consensus 221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T PRK03699 221 QLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYA 300 (394)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 334455676666 567999998888666555555555569999999999999988777666665 455566777777777
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
.++.|++.+...+...+... +..| +++++..+.......+|..++|.+.|.+.+..|+ +..++.......+
T Consensus 301 ~~~~G~~~~~~~~~~~~~~~------~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~--~~~~~~~~~~~~~ 371 (394)
T PRK03699 301 ILGLGFFSSAIYTTIITLGS------QQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGL--QAALLTANGLYAV 371 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCc--hhhhhhhHHHHHH
Confidence 88889888777665554444 5554 4567788888888999999999999999999898 7676666655554
Q ss_pred HHH
Q psy10432 189 STL 191 (440)
Q Consensus 189 ~~~ 191 (440)
..+
T Consensus 372 ~~~ 374 (394)
T PRK03699 372 VFV 374 (394)
T ss_pred HHH
Confidence 433
No 148
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.25 E-value=1.2e-10 Score=112.00 Aligned_cols=150 Identities=9% Similarity=0.000 Sum_probs=103.4
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h--hhcccchhHHHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C--LTKFSSDFYILLYGR 109 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~--~~~~~~~~~~l~~~r 109 (440)
.....|... +++|.|..+.++..........+..++.|+++||+|||+.+.....+..++ . .....++.+...+.+
T Consensus 277 ~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (467)
T PRK09556 277 IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASL 356 (467)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 344565544 668999988887666666556666679999999999998876654443333 2 223345666666778
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHh------------hcccCch
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGL-FAIVSGFTAHFFAD------------ILNLGPI 176 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~------------~~gw~~~ 176 (440)
++.|++............. |.+|+++|+++.|+.+...++ |..++|.+.|.+.+ ..|| +
T Consensus 357 ~~~G~~~~~~~~~~~~~~~------~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~--~ 428 (467)
T PRK09556 357 FALGFLVFGPQLLIGVAAV------GFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGW--A 428 (467)
T ss_pred HHHHHHHhhHHHHHHHHHH------hhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccCh--H
Confidence 8888654332121122334 999999999999999999886 77999999999999 4567 7
Q ss_pred hhHHHHHHHHHHHHH
Q psy10432 177 APFAVAIPFLLGSTL 191 (440)
Q Consensus 177 ~~~~~~~~~~~~~~~ 191 (440)
..|.+..+..++..+
T Consensus 429 ~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 429 GTFAALDIAAIGCIC 443 (467)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777666555544433
No 149
>KOG3098|consensus
Probab=99.24 E-value=1.4e-08 Score=94.17 Aligned_cols=314 Identities=12% Similarity=0.038 Sum_probs=175.2
Q ss_pred HHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccc
Q psy10432 56 YIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYY 135 (440)
Q Consensus 56 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 135 (440)
..+-+..-.+...+.+.+.|+.|.|..+.++...+..--+..+-+|-+.+++...+.|+|.+.... ..-.++++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~------GqG~ylt~ 129 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWT------GQGGYLTS 129 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheec------ccceehhh
Confidence 344444444444589999999999999999999998874444566788889999999999999844 44455559
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cCch-h----------hHHHHHHHHHHHHH--HHHHh
Q psy10432 136 LFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN------LGPI-A----------PFAVAIPFLLGSTL--FIYFC 196 (440)
Q Consensus 136 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g------w~~~-~----------~~~~~~~~~~~~~~--~~~~~ 196 (440)
..++|++.+..++.......+.++|..+-..+..+-+ -..+ . ...+..++..+..+ ....+
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~ 209 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF 209 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee
Confidence 9999999999999999999998888765544322110 0000 0 00111111111011 11111
Q ss_pred ccccCCCCCccCC-CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--h-ccC----CchhhHHHHHH
Q psy10432 197 WEEHYDPKTAKSS-LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--E-VLS----PPLGLVFSCFM 268 (440)
Q Consensus 197 ~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~----~~~g~~~~~~~ 268 (440)
.|.+.....++.. ....+..+..-+++++|+++.+.............+...++..+ . ..+ ...++.....+
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g 289 (461)
T KOG3098|consen 210 LPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIG 289 (461)
T ss_pred cCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHh
Confidence 2221111111111 01111122223455667766654444333222222222222222 1 112 33455555666
Q ss_pred HHHHHHHHHHHHHHhh--ccCCchhHHHHHHHHHHHHHHHHHhhhccc--------cchhhcchhHHHHHHHHHHHhhhc
Q psy10432 269 ISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVSTVLTSSLF--------DSRRVLSTNLCFVAFLIYEISVGM 338 (440)
Q Consensus 269 ~~~~~~~~~~g~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~ 338 (440)
++.+++....+.+.+| ++|+++.+..+..+.....++......... .....|......+...+.+++-..
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 7777777777777766 577888877777776666655422211100 001111122233333345555555
Q ss_pred hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 339 YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 339 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
.....+....... +++|.++.++...-..+.+.++-.
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhh
Confidence 6777777888877 577777777777777766666554
No 150
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.24 E-value=2.6e-10 Score=106.81 Aligned_cols=144 Identities=11% Similarity=0.053 Sum_probs=112.9
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG 112 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~ 112 (440)
...+.+...+|.|.++.++|.+..++.....+..++.|++.||+|+|+.+..+.+..+++ .+....++.+.+++..++.
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH 303 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 444555555789999999998888777766666689999999999999999998888887 5677788999999999999
Q ss_pred HHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
|++.+...+....+.. +. +++++++..+..+ ...++|..+||.++|.+.|.+|+ . .++..+.+.+
T Consensus 304 g~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~-~~~~~~~~~~ 369 (382)
T PRK11128 304 CGTFTVCHLAAMRYIA------AR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--G-VFWVMALVAL 369 (382)
T ss_pred HHHHHHHHHHHHHHHH------HC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--H-HHHHHHHHHH
Confidence 9999988665555544 65 5667788888886 55678889999999999999886 3 4444443333
No 151
>PRK10054 putative transporter; Provisional
Probab=99.24 E-value=3.5e-10 Score=106.35 Aligned_cols=169 Identities=12% Similarity=0.013 Sum_probs=118.5
Q ss_pred cchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q psy10432 226 PCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF 301 (440)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 301 (440)
|.++.+.+..++...+.+......++++ +..+ .+.|+..+...++.+++++..|+++|| +++|+.+..+.....+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFAS 85 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHHH
Confidence 4455666666666666665555455555 3334 778999999999999999999999998 9999988887777666
Q ss_pred HHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc
Q psy10432 302 SITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE 381 (440)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~ 381 (440)
+.+.+ .+..+ .+ ..+....+.+...+...+....+..|..|+++|++++|+.+...++|..++|.+.
T Consensus 86 ~~~~~-~~~~~---~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~--- 152 (395)
T PRK10054 86 GFIAI-PLVNN---VT------LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLG--- 152 (395)
T ss_pred HHHHH-HHHhH---HH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 55444 22111 11 1223333344445556777888889999999999999999999999999999843
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 382 DAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
+.+.+ .+++..|...+++.+++.+...
T Consensus 153 ~~l~~--~g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 153 TLLVM--QSINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHH--hccCcHHHHHHHHHHHHHHHHH
Confidence 44433 4678888888777766654443
No 152
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=3.3e-10 Score=106.50 Aligned_cols=153 Identities=12% Similarity=-0.001 Sum_probs=107.8
Q ss_pred HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhh-hccccccccccchhHHHHHHhHHHHHh-hh-hc-----ccch
Q psy10432 30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIF-GIVVGSIADKFGRKLICISYGIVYTLC-CL-TK-----FSSD 101 (440)
Q Consensus 30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~-~~-----~~~~ 101 (440)
+......+.++..+|.|.+++++|+++.+......+. .++.|++.||+|+|+.+..+..+.+.. .. .. ..++
T Consensus 223 ~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (390)
T TIGR02718 223 TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPG 302 (390)
T ss_pred HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCc
Confidence 3444555666666889999999999776654433333 369999999999999988876655333 21 11 1233
Q ss_pred hHHHHHHHHHHHHHHhhhccccchhhhccccccccccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432 102 FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV-EWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180 (440)
Q Consensus 102 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 180 (440)
...++....+.+++.+...+...+.+. +..++ +++++.++..+...++|..+||.++|.+.++.|+ +..|.
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~--~~~f~ 374 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFM------RFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGY--AGGFL 374 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--HHHHH
Confidence 444455555666666666555555555 66665 7899999999999999999999999999999888 77777
Q ss_pred HHHHHHHHHH
Q psy10432 181 VAIPFLLGST 190 (440)
Q Consensus 181 ~~~~~~~~~~ 190 (440)
....+.++..
T Consensus 375 ~~~~~~l~a~ 384 (390)
T TIGR02718 375 SGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHH
Confidence 7665555433
No 153
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.21 E-value=4e-10 Score=107.61 Aligned_cols=152 Identities=16% Similarity=0.141 Sum_probs=106.7
Q ss_pred hhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432 249 WTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 249 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (440)
..|.+++.+ .+.++..+...++..++.+..|++.|| +++|+.+..+..+..++.+.. .......... . ..
T Consensus 49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~----~l 121 (438)
T TIGR00712 49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLM-GFVPWATSSI-A----IM 121 (438)
T ss_pred hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHH-hccccccchH-H----HH
Confidence 445553233 778899999999999999999999997 999998888777776665544 2111100111 1 23
Q ss_pred HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432 326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA 405 (440)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (440)
.....+.+++.+...+.....+.+.+|+++|++++|+.+...++++.+++.+. + ....+ ..+|+..|.+.++..++.
T Consensus 122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~-~-~~~~~-~~~w~~~f~~~~~~~~i~ 198 (438)
T TIGR00712 122 FVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV-L-LGMAW-FNDWHAALYFPAICAIIV 198 (438)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH-H-HHHHH-hhhhHHHHHHHHHHHHHH
Confidence 33344556667777777778888999999999999999999999999888744 1 12223 467899999888776665
Q ss_pred HHHHH
Q psy10432 406 LLASC 410 (440)
Q Consensus 406 ~~~~~ 410 (440)
.+..+
T Consensus 199 ~~~~~ 203 (438)
T TIGR00712 199 ALFAF 203 (438)
T ss_pred HHHHH
Confidence 54433
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.20 E-value=3.4e-10 Score=105.39 Aligned_cols=145 Identities=11% Similarity=0.052 Sum_probs=109.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++.+++.++.|++.|| +|||+.+..+..+..++................ ..+....+.+++.+
T Consensus 34 ~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~g~~~~ 107 (365)
T TIGR00900 34 SVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVLPFVALLGGLNIW-----QVYVLAGILAIAQA 107 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHH-----HHHHHHHHHHHHHH
Confidence 678999999999999999999999998 999999888877766655444222111111111 34455556667788
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
...+...+++.|..|+++|++.+|..+....+|..++|.+ + +.+.+ ..+++..|.+.++..+++.+.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~-~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 108 FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI--G-GLMYA-TLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHH--H-HHHHH-HhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 8889999999999999999999999999999999999984 3 55666 6788888888777666655544443
No 155
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.19 E-value=4.7e-10 Score=105.33 Aligned_cols=139 Identities=10% Similarity=0.115 Sum_probs=107.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|++.|| +++|+.+..+.....++.+.. ... +. .. .......+.+++.+
T Consensus 40 ~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~-~~~---~~-~~-----~~~~~~~l~g~~~~ 108 (385)
T TIGR00710 40 SIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGL-ALS---NN-IE-----TLLVLRFVQAFGAS 108 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHH-HHH---cc-HH-----HHHHHHHHHHcchh
Confidence 678999999999999999999999998 999999888887777766554 211 11 11 23444455566677
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
...+....++.|..|+++|+++.+..+....++..++|.+. +.+.+ ..+++..+.+.++..++..+....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~---~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 109 AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLG---GYILV-WLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HcCHHHHHHHHHHHHHHHHHHHHH
Confidence 77888889999999999999999999999999999999843 55656 678898888877766665554443
No 156
>PRK09952 shikimate transporter; Provisional
Probab=99.19 E-value=1.1e-09 Score=104.46 Aligned_cols=160 Identities=13% Similarity=0.100 Sum_probs=103.3
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc---c-chhHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF---S-SDFYILLY 107 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~---~-~~~~~l~~ 107 (440)
...+.|... +++|.+.........+....+.+..++.|+++||+||||.++.+.++..++ ..... . ++.+.+++
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 334454433 567888765544333344444445579999999999999988876665554 22211 2 23444455
Q ss_pred HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432 108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL 186 (440)
Q Consensus 108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 186 (440)
..++.+++.+...+...+++. |.+|++.|+...++... +..+|..++|.+.+++.+..+..+..++.......
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~------e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFT------EMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 667777887776665556666 99999999999888654 45589999999999998865322366666555555
Q ss_pred HHHHHHHHHhcccc
Q psy10432 187 LGSTLFIYFCWEEH 200 (440)
Q Consensus 187 ~~~~~~~~~~~~e~ 200 (440)
++..+.. ..++|+
T Consensus 423 ~i~~v~~-~~~~~~ 435 (438)
T PRK09952 423 LISAMTA-LLMKDN 435 (438)
T ss_pred HHHHHHH-HHcccc
Confidence 5444433 345653
No 157
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.19 E-value=2.2e-10 Score=107.83 Aligned_cols=142 Identities=16% Similarity=0.196 Sum_probs=106.0
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH-h-h-hhc--ccchhHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL-C-C-LTK--FSSDFYILLY 107 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~-~-~~~--~~~~~~~l~~ 107 (440)
...+.|.+. +++|.++.+.+...........+..++.|+++||+|||+.+..+..+..+ + . ... ..++.+.++.
T Consensus 238 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T TIGR00883 238 ITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFF 317 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 445666665 67888888888877777777777778999999999999987754443332 2 1 222 2356677777
Q ss_pred HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHH
Q psy10432 108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARA-TFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAI 183 (440)
Q Consensus 108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~ 183 (440)
..++.|++.+...+...+.+. |.+|+++|+++.++. +....+|..++|.+++.+.++.| | +..++...
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~--~~~~~~~~ 387 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGSFLP------ELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDW--YAIGYYLA 387 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHH------HhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcc--hhHHHHHH
Confidence 888899988888777777777 999999999999984 56667899999999999999988 7 54444333
No 158
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.18 E-value=8.5e-10 Score=102.14 Aligned_cols=137 Identities=16% Similarity=0.244 Sum_probs=111.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
..+.++..+...++..++.++.|++.|| +|+|+.+..+..+.+++.+.. .+. ...+ ..+....+.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~-~~~---~~~~------~~~~~~~l~g~~~ 99 (352)
T PF07690_consen 31 PSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLL-AFA---SNFW------LLLIARFLLGIGS 99 (352)
T ss_dssp SHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHH-HHH---CCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHh-hhh---hhHH------HHhhhcccccccc
Confidence 3778999999999999999999999998 999999998888888874444 221 1112 2455555677777
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
+...+....++.|..|+++|++.++..+...++|..++|.+ + +.+.+ ..+++..|.+.++..++..++
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~-~~l~~-~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLL--G-GFLIS-YFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHH--H-HHCCC-HCHHCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhhhccccccchhhhhhhcccch--h-hhhhh-ccccccccccccchhhhhhhh
Confidence 88999999999999999999999999999999999999984 3 66666 788999999998888887664
No 159
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.18 E-value=4.3e-09 Score=101.60 Aligned_cols=155 Identities=12% Similarity=0.217 Sum_probs=107.9
Q ss_pred hHhhhH-hhcCCChhhHHHHH-HHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhccc-chhHHHHHHH
Q psy10432 37 YVYKVY-KDYGYDEKNIALLY-IAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFS-SDFYILLYGR 109 (440)
Q Consensus 37 ~~~~~~-~~~g~s~~~~~~~~-~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~-~~~~~l~~~r 109 (440)
..++.. +++|.|.++++... ..+.....+..++.|+++||+|||+.+.++.++.+++ . ..... ++.+.+...-
T Consensus 244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 344443 56899999999876 3555555555579999999999999877666554443 2 12232 4555555556
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 189 (440)
+++.++.+...+...+... +..+++.+++..++.+...++|..+++.+.|.+.+.+|| +..|.+.....++.
T Consensus 324 ~l~~~~~g~~~~~~~a~~~------~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~--~~~f~~~~~~~l~~ 395 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLM------TLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGW--PTFYLFSVAAAVPG 395 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH------HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHH
Confidence 6655555555444444555 888888999999999999999999888999999999898 77777776666655
Q ss_pred HHHHHHhcccc
Q psy10432 190 TLFIYFCWEEH 200 (440)
Q Consensus 190 ~~~~~~~~~e~ 200 (440)
.+.... ++++
T Consensus 396 l~~~~~-~~~~ 405 (491)
T PRK11010 396 LLLLLV-CRQT 405 (491)
T ss_pred HHHHHH-HHhc
Confidence 444433 3443
No 160
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.17 E-value=5.1e-10 Score=105.33 Aligned_cols=153 Identities=15% Similarity=-0.010 Sum_probs=102.9
Q ss_pred HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhH--HHH------HHhHHHHHh-hhhcccc
Q psy10432 31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKL--ICI------SYGIVYTLC-CLTKFSS 100 (440)
Q Consensus 31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~--~l~------~~~~~~~~~-~~~~~~~ 100 (440)
......+.|... +++|.++.+.++......+...+..++.|+++||+|||+ ... .+.....+. ......+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN 310 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence 333445555554 567888888888777777777667789999999999996 111 111111111 1222233
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhH
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPF 179 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~ 179 (440)
+.+.......+.+.+.+ ..+...+++. |..|+++|+++.++.+....+|..++|.+.+.+.+..| | +..+
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~--~~~~ 381 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALIS------DNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF--AGAL 381 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHH------hhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch--hHHH
Confidence 44444444444444444 5566566666 99999999999999999999999999999999999887 7 6666
Q ss_pred HHHHHHHHHHHHH
Q psy10432 180 AVAIPFLLGSTLF 192 (440)
Q Consensus 180 ~~~~~~~~~~~~~ 192 (440)
...+...++..+.
T Consensus 382 ~~~~~~~~~~~~~ 394 (399)
T TIGR00893 382 MVVAALALIGALS 394 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 6665555544443
No 161
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.17 E-value=6.5e-10 Score=106.77 Aligned_cols=177 Identities=11% Similarity=0.104 Sum_probs=125.3
Q ss_pred cCcchHH-HHHHHHHHHhHHHHHHHhhhhhhhc---cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHH
Q psy10432 224 TNPCLLT-LGIVQSIYEGIMYTFIFVWTPVLEV---LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTV 296 (440)
Q Consensus 224 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~ 296 (440)
++|+... +.+..++...+++......+.++.. .+ .+.+.......++..+++++.|++.||++|+|+.+..+.
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH
Confidence 4444443 4444444455555554544545432 33 678999999999999999999999995369999999999
Q ss_pred HHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch---hhHHHHHHhhhhhhhHHHH
Q psy10432 297 YLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK---ARATITNWLRVPTNFITCF 373 (440)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~ 373 (440)
.+..++.+.+ .+.. + .+ ...++..+.+++.|...|...+++.+..|++ +|++++++.+...++|..+
T Consensus 87 ~~~~~g~~~~-~~~~--~-~~------~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i 156 (475)
T TIGR00924 87 IVLMLGHFML-AMSI--Y-PD------LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI 156 (475)
T ss_pred HHHHHHHHHH-Hhcc--c-Hh------HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH
Confidence 8888877555 2211 1 11 2344555566677888888888888888765 4888999999999999999
Q ss_pred HHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 374 TLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+|.+. +.+.+ ..+++..|.++++..+++.+.....++
T Consensus 157 g~~l~---g~l~~-~~g~~~~f~~~~~~~~~~~l~~~~~~~ 193 (475)
T TIGR00924 157 SPLLA---GVIAE-NYGYHVGFNLAAVGMVIGLLTFFAGRH 193 (475)
T ss_pred HHHHH---HHHHH-hcChHHHHHHHHHHHHHHHHHHHHccc
Confidence 99944 66767 778999999888766666555444443
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1e-09 Score=99.48 Aligned_cols=169 Identities=16% Similarity=0.229 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHH
Q psy10432 228 LLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSIT 304 (440)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~ 304 (440)
.+.+.+..+......+......+++-++.+ ..+|...+.+..+..+++++...+.|| ++||+.+.....+..++-+
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lFi~~n~ 93 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLALFIVSNL 93 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHH
Confidence 344555555555555555454555555444 788999999999999999999999997 9999999998888888876
Q ss_pred HHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccc
Q psy10432 305 VSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAE 384 (440)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~ 384 (440)
.. . ..|+....+++=.+.++..|.+++.......+.+|+++|+++.++......+...+|.. .+ .++
T Consensus 94 l~-a---------lAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvP--LG-t~i 160 (394)
T COG2814 94 LS-A---------LAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVP--LG-TFL 160 (394)
T ss_pred HH-H---------HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhcc--HH-HHH
Confidence 65 2 22222245555556677899999999999999999999999999999999999999887 44 666
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 385 GGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
.| .+||+..|...+++.+++.+..+.
T Consensus 161 g~-~~GWR~~F~~ia~l~ll~~~~~~~ 186 (394)
T COG2814 161 GQ-LFGWRATFLAIAVLALLALLLLWK 186 (394)
T ss_pred HH-HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 67 999999999999888877665544
No 163
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.15 E-value=3.2e-09 Score=99.75 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=109.8
Q ss_pred hhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432 249 WTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC 325 (440)
Q Consensus 249 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (440)
.+++.++.+ .+.++..+...++..+++++.|++.|| +|||+.+..+..+..++.+.. ... +..+ ..
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~-~~~---~~~~------~l 111 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAVLLTLSCLLV-SFA---NSFS------LL 111 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHHHHHHHHHHH-HHH---ChHH------HH
Confidence 344444444 677888889999999999999999997 999999998888887766544 221 1111 23
Q ss_pred HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432 326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA 405 (440)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (440)
+..-.+.+++.+...|....++.|.+|+++|+++.+......+++..++|.+ + +.+.+ ..+++..|.+.+++.+++
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l--~-~~l~~-~~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPL--G-SFLGE-LIGWRNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHh-hcCHHHHHHHHHHHHHHH
Confidence 4444456667777888889999999999999999999999999999999984 3 66666 778999998877665554
Q ss_pred HH
Q psy10432 406 LL 407 (440)
Q Consensus 406 ~~ 407 (440)
.+
T Consensus 188 ~l 189 (394)
T PRK10213 188 IF 189 (394)
T ss_pred HH
Confidence 43
No 164
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.14 E-value=1.4e-09 Score=103.23 Aligned_cols=150 Identities=13% Similarity=0.131 Sum_probs=119.6
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchh--HHHHHHhHHHHHh-hhhcc--------cchhHHHHHHHHH
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRK--LICISYGIVYTLC-CLTKF--------SSDFYILLYGRLF 111 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr--~~l~~~~~~~~~~-~~~~~--------~~~~~~l~~~r~l 111 (440)
+++|.+..+...+..+..+.+.+.+.++|++.||+|.| ++++.+..++.+. +...+ .++.+.+++.-++
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~ 389 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL 389 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence 68999999988777777777777778999999999999 8888888777554 32222 5677889999999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 191 (440)
.|+..|..++..-+++. +..|+++.+..+|++....-....+||++-+.+.+..| ..|..+....++.++..+
T Consensus 390 ~G~~~G~~qs~sRs~~~------~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl~ 462 (477)
T PF11700_consen 390 IGLFMGGIQSASRSLFS------RLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGLI 462 (477)
T ss_pred HHHHhhhHHHHHHHHHH------HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHH
Confidence 99999999886666666 99999999999999999999999999999999999876 236777666666655444
Q ss_pred HHHHhcccc
Q psy10432 192 FIYFCWEEH 200 (440)
Q Consensus 192 ~~~~~~~e~ 200 (440)
+. ..++++
T Consensus 463 ll-~~v~~~ 470 (477)
T PF11700_consen 463 LL-FFVDVE 470 (477)
T ss_pred HH-hhccch
Confidence 43 444544
No 165
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.14 E-value=2.5e-09 Score=102.72 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=117.4
Q ss_pred hhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHH
Q psy10432 36 PYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGG 113 (440)
Q Consensus 36 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G 113 (440)
..+|.+. +++|.++...|++.+...+...+.+...+++.+|+++++.+..+.+..+++ ...+++++.+..++..++.|
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G 318 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAG 318 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 3454444 678999999988544333333333348899999999999998898888888 68899999999999999999
Q ss_pred HHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432 114 IATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 192 (440)
++........++.+- +..|++.|||+++++++....+..+|..+.|.+.+.+|. +..+.+.++..++..++
T Consensus 319 ~~~~~~~~~~~t~~Q------~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~--~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 319 AAWIIANSSLNTLVQ------LSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGV--RTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHH------HhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHH
Confidence 999888665555555 999999999999999999999999999999999999888 66666665544444443
No 166
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.13 E-value=1.9e-09 Score=101.30 Aligned_cols=164 Identities=12% Similarity=0.168 Sum_probs=113.9
Q ss_pred CcchHHHHHHHHHHHhHHHHHHHhhhhhhhcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q psy10432 225 NPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF 301 (440)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 301 (440)
+|.++.+.+..++...+........++...+. ....++..+...+...+..++.|++.|| ++||+.+..+..+..+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLL 80 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHH
Confidence 45666666666665554333333334444222 2567888899999999999999999998 9999999999888776
Q ss_pred HHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc
Q psy10432 302 SITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE 381 (440)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~ 381 (440)
+.+.+ .... . ..+...+.+++.+...|...+++.|.+|+|+|++++|+.+...+.+..+||.+ +
T Consensus 81 ~~~~~-~~~~-------~-----~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~l--g- 144 (393)
T PRK11195 81 GCLLM-LFGI-------H-----PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVL--G- 144 (393)
T ss_pred HHHHH-HHHH-------H-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--H-
Confidence 65443 2111 0 12222345666888999999999999999999999999999999999999983 4
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 382 DAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
+.+.+ . .+...+.+.+.+.+++.+
T Consensus 145 G~l~~-~-~~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 145 GALAD-P-HAEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHH-H-HHHHHHHHHHHHHHHHHH
Confidence 66655 3 255555555544444433
No 167
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.13 E-value=8.3e-10 Score=106.92 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=103.4
Q ss_pred hHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--ch-hH-HHHHHHHH
Q psy10432 37 YVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SD-FY-ILLYGRLF 111 (440)
Q Consensus 37 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~-~~-~l~~~r~l 111 (440)
+.|.+.++.|.+....++......+...+..++.|+++||+|||+.++.+..+.+++ .+.... ++ .+ ....+.++
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 372 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF 372 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 446666888887665554433344444444569999999999999999998888877 433221 11 11 22233444
Q ss_pred HHHHHhhh-ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH------HhhcccCchhhHHHHHH
Q psy10432 112 GGIATSIL-FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFF------ADILNLGPIAPFAVAIP 184 (440)
Q Consensus 112 ~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~gw~~~~~~~~~~~ 184 (440)
.+.+.+.. .|...+++. |.+|+++|++++|+......+|.++++.+.+.+ .+..+| +..|++.++
T Consensus 373 ~~~~~~~~~~~~~~~~~~------e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~ 444 (479)
T PRK10077 373 YVAAFAMSWGPVCWVLLS------EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN--GFSYWIYGC 444 (479)
T ss_pred HHHHHhccccchhHHHhH------hhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC--ccHHHHHHH
Confidence 44444432 244445555 999999999999999999999988886665544 356677 666766666
Q ss_pred HHHHHHHHHHHhccccCC
Q psy10432 185 FLLGSTLFIYFCWEEHYD 202 (440)
Q Consensus 185 ~~~~~~~~~~~~~~e~~~ 202 (440)
..++..++.++..||+++
T Consensus 445 ~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 445 MGVLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHHHhccccCCC
Confidence 656556666666677643
No 168
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.13 E-value=2.8e-09 Score=100.39 Aligned_cols=162 Identities=9% Similarity=0.044 Sum_probs=116.7
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432 231 LGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS 306 (440)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 306 (440)
.....++...+.+......++++ +..+ ...|+..+...+...+.+++.|++.|| +++|+.+..+.....++.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHH
Confidence 33445555555555545455555 3333 778888888888888889999999998 999999998888888777655
Q ss_pred HHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 386 (440)
... +..+ ...+...+.+++.+...|...+.+.+..|+|+|+++.|+.+...++|..++|.+. +.+.
T Consensus 94 -~~~---~~~~------~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~---g~l~- 159 (400)
T PRK11646 94 -AIA---HEPW------LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG---SWLL- 159 (400)
T ss_pred -HHh---ccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-
Confidence 221 1112 2344444555566677788888899999999999999999999999999999843 4444
Q ss_pred ccchhhHHHHHHHHHHHHHHHH
Q psy10432 387 KLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
..+++..|.+.++..++..++
T Consensus 160 -~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 160 -QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred -HhhHHHHHHHHHHHHHHHHHH
Confidence 347888888877766655444
No 169
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.12 E-value=3.1e-09 Score=99.61 Aligned_cols=168 Identities=12% Similarity=0.167 Sum_probs=118.3
Q ss_pred cchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432 226 PCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS 302 (440)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 302 (440)
+.++......+.............++..++.+ .+.++..+...++..++.++.|++.|| +++|+.+..+.....++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVIG 81 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHH
Confidence 33444444444444444443333333334444 668899999999999999999999997 99999999888888777
Q ss_pred HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccc
Q psy10432 303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNED 382 (440)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~ 382 (440)
.+.. ... +..+ ..++.-.+.+++.+...+.......+..|+++|+++++.......++..++|.+ + +
T Consensus 82 ~~l~-~~~---~~~~------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~-~ 148 (382)
T PRK10091 82 NAMF-TLS---SSYL------MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPL--G-T 148 (382)
T ss_pred HHHH-HHh---CcHH------HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccH--H-H
Confidence 6554 221 1111 244444556666676777777888899999999999999998888999998873 3 5
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 383 AEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
.+.+ ..+++..|.+.++..++..+.
T Consensus 149 ~l~~-~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 149 YLSQ-EFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHhh-hccHHHHHHHHHHHHHHHHHH
Confidence 5666 678999999888766555443
No 170
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.12 E-value=4.1e-09 Score=99.51 Aligned_cols=162 Identities=10% Similarity=0.002 Sum_probs=104.1
Q ss_pred cchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432 226 PCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS 302 (440)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 302 (440)
+.+....+..++............+++.++.+ .+.++..+...++..++.++.|++.|| +++|+.+..+..+..++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLWCVG 91 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHH
Confidence 33444455555555544433344555554443 788999999999999999999999998 99999998888877776
Q ss_pred HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH-HHHHHHhhcc
Q psy10432 303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT-CFTLIFIKNE 381 (440)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~~~~ 381 (440)
.+.......... .+. ..+....+.+++.+...+.....+.+..|+++|++++|+.+...++|. ..+|.+ +
T Consensus 92 ~~~~~~~~~~~~-~~~-----~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~--~- 162 (402)
T TIGR00897 92 HAAFIVFGLGHA-NYP-----LILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY--S- 162 (402)
T ss_pred HHHHHHHhccCc-cHH-----HHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--H-
Confidence 543311111111 121 123333334444555555666677788899999999999999999886 567763 3
Q ss_pred ccccCccchhhHHHHHH
Q psy10432 382 DAEGGKLIAIHSVFVVC 398 (440)
Q Consensus 382 ~~~~~~~~~~~~~~~~~ 398 (440)
+.+.+ ..+++..++..
T Consensus 163 ~~l~~-~~g~~~~~~~~ 178 (402)
T TIGR00897 163 SYAIP-AFGEMNTLWSA 178 (402)
T ss_pred Hhccc-ccchHHHHHHH
Confidence 45555 55644444433
No 171
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.11 E-value=2.9e-09 Score=100.24 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=102.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|++.|| +|+|+.+..+.....++.... ... ++ .. .......+.+++.+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~-~~~--~~--~~-----~~~~~~~l~g~~~~ 106 (392)
T PRK10473 38 AQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLC-SLA--ET--SS-----LFLAGRFLQGIGAG 106 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHH-HHh--Cc--HH-----HHHHHHHHHHhhhh
Confidence 567888888899999999999999998 999999888877776666544 211 11 11 23333344555566
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (440)
...+.....+.|..|+++|+++.+..+....++..++|.+ + +...+ ..+++..+.+.++..++..++.
T Consensus 107 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i--~-~~l~~-~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 107 CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL--G-HLIML-KFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHh-CcChHHHHHHHHHHHHHHHHHH
Confidence 6777788899999999999999999999999998888874 3 44545 6688888888877666655544
No 172
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.11 E-value=2.2e-09 Score=101.79 Aligned_cols=174 Identities=12% Similarity=0.065 Sum_probs=120.0
Q ss_pred chHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHHHHHHHHH
Q psy10432 227 CLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLTVYLATF 301 (440)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~~~~~~~~ 301 (440)
.++.............|......+.++ +..+ .+.+...........++.+++|+++|| + |+|+.+..+.++..+
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR-ilGrrr~iliG~il~~l 88 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK-VLGNRMAVMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHH
Confidence 344445555555555555544333333 2223 667778888888888999999999998 8 999999888888877
Q ss_pred HHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhHHHHHHHHhh
Q psy10432 302 SITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFITCFTLIFIK 379 (440)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~~ 379 (440)
+.+.+ .... .... ....+..+...+.|...+...+++.|.+|++ +|.+++++.....++|+.++|.+.
T Consensus 89 g~lll-~~~~--~~~~------~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~- 158 (493)
T PRK15462 89 GHVVL-GASE--IHPS------FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC- 158 (493)
T ss_pred HHHHH-HHhh--cchh------HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH-
Confidence 76544 2111 0001 1233333444556777787788899998875 799999999999999999999955
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 380 NEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.+.+ ..+++..|.++++.++++.+.....++
T Consensus 159 --g~L~~-~~Gw~~~F~iaaigm~l~li~~~~~~~ 190 (493)
T PRK15462 159 --GYAQE-EYSWAMGFGLAAVGMIAGLVIFLCGNR 190 (493)
T ss_pred --HHHHh-hhChHHHHHHHHHHHHHHHHHHHHhhh
Confidence 66766 778999999987766666655544343
No 173
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.10 E-value=3.3e-09 Score=100.29 Aligned_cols=138 Identities=12% Similarity=0.089 Sum_probs=105.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.|+..+...++..++++..|++.|| +|+|+.+..+.++..++.+.. .+..+ .. ..+..-.+.+++.+
T Consensus 43 ~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~-~~~~~----~~-----~l~~~r~l~G~~~~ 111 (412)
T TIGR02332 43 TMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLWGIASTAT-MFATG----PE-----SLYLLRILVGIAEA 111 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHHHHHHHHH-HHhcC----HH-----HHHHHHHHHHHHHh
Confidence 778999999999999999999999998 999999888887777766554 22111 11 23444445666777
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc------CccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG------GKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
...|....++.|.+|+++|+++.|+.+....+|..+++.+. +.+. + ..+|+..|.+.++..++...+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~---~~l~~~~~~~~-~~gwr~~f~~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 112 GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS---GYILALDGLMA-LKGWQWLFLLEGFPSVILGVMTW 186 (412)
T ss_pred hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCCCCCC-ccchhHHHHHHHHHHHHHHHHHh
Confidence 78888888899999999999999999999999999988743 3222 3 46899999998776655444433
No 174
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.10 E-value=3.7e-09 Score=99.98 Aligned_cols=135 Identities=12% Similarity=0.088 Sum_probs=101.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
..+.++..+...++..++.++.|++.|| +|+|+.+..+.....++.+.. .+. + .+. ..+....+.+++.
T Consensus 46 ~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~-~~~--~--~~~-----~l~~~~~l~G~~~ 114 (405)
T TIGR00891 46 TVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIVLFSAGTLAC-GFA--P--GYI-----TMFIARLVIGIGM 114 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH-HHh--c--cHH-----HHHHHHHHHHhhh
Confidence 3778999999999999999999999998 999999888877776665444 221 1 111 2344445666667
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccc--hhhHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLI--AIHSVFVVCTACLLVAL 406 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 406 (440)
+...+....++.|..|+++|+++.++.+....+|..+++.+. +...+ .. +++..|.+.++..++..
T Consensus 115 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~---~~l~~-~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 115 GGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY---SLVVP-VWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred hhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH---HHHHH-hcCccHHHHHHHHHHHHHHHH
Confidence 778888889999999999999999999999999999998843 33433 33 37888877655544443
No 175
>PRK10504 putative transporter; Provisional
Probab=99.10 E-value=2.7e-09 Score=103.05 Aligned_cols=171 Identities=10% Similarity=0.099 Sum_probs=119.8
Q ss_pred chHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432 227 CLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI 303 (440)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 303 (440)
.++...+..++.....+......+.+.+..+ .+.++..+...++..++.++.|++.|| +++|+.+..+.....++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHH
Confidence 3455555554444444444333333334444 566778888888999999999999997 999998887776666655
Q ss_pred HHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccc
Q psy10432 304 TVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDA 383 (440)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~ 383 (440)
+.. .+. ...+ .....-.+.+++.+...|.....+.+..|+++|+++.|+.+...+++..++|.+ + +.
T Consensus 90 ~~~-~~~---~~~~------~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~-g~ 156 (471)
T PRK10504 90 LFC-ALS---GTLN------ELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL--G-GL 156 (471)
T ss_pred HHH-HHh---CCHH------HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH--H-HH
Confidence 443 211 1111 234444566667777888888889999999999999999999999999999984 3 66
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 384 EGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
+.+ ..+|+..|.+......++.+.....
T Consensus 157 l~~-~~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 157 LVE-YASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred HHh-hccHHHHHHHHHHHHHHHHHHHHHh
Confidence 777 7789999998877666655554433
No 176
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.09 E-value=1.1e-11 Score=119.16 Aligned_cols=346 Identities=14% Similarity=0.075 Sum_probs=3.0
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----c-----
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----S----- 100 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~----- 100 (440)
.......+..+.++|+++.++.|++.+..-+...+..++..++.+|..|-|.+-.|.++.+++ +++++- +
T Consensus 19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 333444555677899999999998666655555555568999999988888888888888887 443220 0
Q ss_pred -----------------------------------------hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccc
Q psy10432 101 -----------------------------------------DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV 139 (440)
Q Consensus 101 -----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (440)
-+..++++.++.|+|....++...+++= |.+++
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD------Dnv~~ 172 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID------DNVSK 172 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec------ccccc
Confidence 0245788999999999999776555555 99999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------cc--CchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432 140 EWLNLTFARATFGSGLFAIVSGFTAHFFADIL------------------NL--GPIAPFAVAIPFLLGSTLFIYFCWEE 199 (440)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------gw--~~~~~~~~~~~~~~~~~~~~~~~~~e 199 (440)
++-+.-+|+..+...+|..+|-++++.+.+.+ .| .|-.-|++.+.+.++..+....+ |+
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk 251 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PK 251 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 99999999999999999999999998875432 12 01233444444444444444333 33
Q ss_pred cCCCC---------Cc-c------C----C-------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432 200 HYDPK---------TA-K------S----S-------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV 252 (440)
Q Consensus 200 ~~~~~---------~~-~------~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (440)
+.++. ++ + + + ...++.....+++++||.+....+...........+.++.+.+
T Consensus 252 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKy 331 (539)
T PF03137_consen 252 KLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKY 331 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 00 0 0 0 0112334456778999999988888777777766665645555
Q ss_pred h-hccC---CchhhHHHHHHH-HHHHHHHHHHHHHhh-ccCCchhHHHHHHHHHHHHHH---HHHh-hhcc-----ccch
Q psy10432 253 L-EVLS---PPLGLVFSCFMI-SIMIGSKIYSILILK-YFKPETMLTLTVYLATFSITV---STVL-TSSL-----FDSR 317 (440)
Q Consensus 253 ~-~~~~---~~~g~~~~~~~~-~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~-----~~~~ 317 (440)
+ .+++ ..++++.....+ +.++|.+++|.+.+| +.+.|..+....+...+..+. .+.. .... +..+
T Consensus 332 lE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y 411 (539)
T PF03137_consen 332 LESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPY 411 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCcc
Confidence 5 3333 444554444333 566888999999987 344556666555555554433 1111 0000 0000
Q ss_pred -------h-------------------h------c---chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH
Q psy10432 318 -------R-------------------V------L---STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW 362 (440)
Q Consensus 318 -------~-------------------~------~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~ 362 (440)
. . . .....+..+.+..+..+..........-+.+|+++|+.+.|+
T Consensus 412 ~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv 491 (539)
T PF03137_consen 412 HNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGV 491 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhH
Confidence 0 0 0 000111111222233333444445566688899999999999
Q ss_pred hhhhhhh-HHHHHHHHhhccccccC
Q psy10432 363 LRVPTNF-ITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 363 ~~~~~~~-g~~~~~~~~~~~~~~~~ 386 (440)
......+ |..-+|+++ |.+.|
T Consensus 492 ~~~~~rllg~IPgPIif---G~iiD 513 (539)
T PF03137_consen 492 QWLIIRLLGFIPGPIIF---GAIID 513 (539)
T ss_dssp -------------------------
T ss_pred HHHHHHhhcCcchHHHH---hHHHh
Confidence 8876654 567778755 66766
No 177
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.09 E-value=1.3e-06 Score=82.41 Aligned_cols=256 Identities=14% Similarity=0.130 Sum_probs=148.7
Q ss_pred HhhhHhhcCC-----ChhhHHHHHHHHHHHHhhh-hccccccccccchhHHHHHHhHHHHHh-hhhccc-----ch----
Q psy10432 38 VYKVYKDYGY-----DEKNIALLYIAGFASSMIF-GIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-----SD---- 101 (440)
Q Consensus 38 ~~~~~~~~g~-----s~~~~~~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-----~~---- 101 (440)
+-++-+.+.+ ..+.+.++.....+...+. .++.+++++|++|++++-.....+... .++++. +.
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 4344555554 3356777777777776666 589999999999999976655544443 222221 11
Q ss_pred ----------------------hHHHHHHHHHHHHHHhhhcc-ccchhhhccccccccccchhhhHHHHHHHHHHHHHHH
Q psy10432 102 ----------------------FYILLYGRLFGGIATSILFS-GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAI 158 (440)
Q Consensus 102 ----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (440)
.|..-+..+...+-.....+ ...+.+. |.++.+|-.|.+++...+.++|.+
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan------di~t~~qakRfy~l~~~ganlg~i 179 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN------QITTIDEAKRFYALFGLGANVALI 179 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCHHHHHHHHHHHHHHHHHHHH
Confidence 12222223333333333322 3333445 999999999999999999999999
Q ss_pred HHHHHHHHHHhhc--------ccCch--hhHHHHHHHHHHHHHHHHHhccccCCC-C-------CccCCCCccchhhhhh
Q psy10432 159 VSGFTAHFFADIL--------NLGPI--APFAVAIPFLLGSTLFIYFCWEEHYDP-K-------TAKSSLLPNSMFSSLK 220 (440)
Q Consensus 159 ~g~~~~~~l~~~~--------gw~~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~-~-------~~~~~~~~~~~~~~~~ 220 (440)
+++.+..++.+.. .|... ..+.+...... ..+.+.+.+.+...+ + ++++++.+.+..++++
T Consensus 180 ~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k 258 (472)
T TIGR00769 180 FSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGL-AIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLK 258 (472)
T ss_pred HHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHH
Confidence 9999988887421 12111 12222222222 223333333221110 0 1112223445678999
Q ss_pred hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH
Q psy10432 221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT 293 (440)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~ 293 (440)
.++++|.++.+.+...+...........|-... +.++ ...|......++..++..++.+++.+| +|-+....
T Consensus 259 ~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~-~Gw~~~a~ 337 (472)
T TIGR00769 259 FLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK-YGWLTAAL 337 (472)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence 999999888877776666555544434444443 2222 334555555566666667777999997 88877666
Q ss_pred HHHHHHHH
Q psy10432 294 LTVYLATF 301 (440)
Q Consensus 294 ~~~~~~~~ 301 (440)
+.-+...+
T Consensus 338 i~Pii~li 345 (472)
T TIGR00769 338 ITPLVMLL 345 (472)
T ss_pred HHHHHHHH
Confidence 55555544
No 178
>TIGR00895 2A0115 benzoate transport.
Probab=99.09 E-value=1.8e-09 Score=101.80 Aligned_cols=136 Identities=16% Similarity=0.180 Sum_probs=103.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++.+++.++.|++.|| +++|+.+..+..+..++.+.. ... . ... .......+.+++.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~-~~~---~-~~~-----~~~~~~~~~g~~~~ 120 (398)
T TIGR00895 52 VQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFSVFTLLC-ALA---T-NVT-----QLLILRFLAGLGLG 120 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHHHHHHHH-HHc---c-chH-----HHHHHHHHHhcccc
Confidence 667888899999999999999999998 999999888887776665544 221 1 111 24444556666777
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
...+...+++.|..|+++|+++.++.+....+|..+++.+. +.+.+ ..+++..+.+.++..++..++
T Consensus 121 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 121 GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA---GWLIP-VFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH---HHHhh-cccceeehhhhhhHHHHHHHH
Confidence 78889999999999999999999999999999999999844 55666 667888888776444444333
No 179
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.09 E-value=5.2e-09 Score=101.49 Aligned_cols=140 Identities=13% Similarity=0.014 Sum_probs=106.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+.+.++.....+..|++.|| +|+|+.+..+.....++.+.. ... +. .. ..+.+-.+.+++.+
T Consensus 41 ~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~~~~~~-~~a---~~-~~-----~li~~r~l~G~g~~ 109 (495)
T PRK14995 41 NELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGLASLAA-AFS---PT-AS-----WLIATRALLAIGAA 109 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH-HHc---CC-HH-----HHHHHHHHHHHHHH
Confidence 678889999999999999999999998 999999999888888777555 221 11 11 23444445556666
Q ss_pred chhhhHHhHhccC-CcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 338 MYCPVTGYLRGRI-IPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 338 ~~~~~~~~~~~~~-~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
...|.....+.+. .|+++|++++|+......+|..++|. .+ +.+.+ ..+|++.|++...+.++..++....
T Consensus 110 ~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~--lg-g~l~~-~~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 110 MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPL--VG-GILLE-HFYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHhhc-cCChHHHHHHHHHHHHHHHHHHHHh
Confidence 6777666655444 47899999999999999999999999 44 77778 8899999998877666655554443
No 180
>PRK15075 citrate-proton symporter; Provisional
Probab=99.09 E-value=3.6e-09 Score=100.92 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=92.1
Q ss_pred hhhhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hh---cccchhHHHH
Q psy10432 33 IQGPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LT---KFSSDFYILL 106 (440)
Q Consensus 33 ~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~---~~~~~~~~l~ 106 (440)
....+.|.+.++ +|.+..+.++........+.+..++.|+++||+|||+.++.+..+..+. . .. ...+++....
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 345556666654 7998888777665555555555679999999999999887765443322 1 11 1223444444
Q ss_pred HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccCch
Q psy10432 107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPI 176 (440)
Q Consensus 107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~~ 176 (440)
...++.|++.+...+....+.. |.+|+++|++..++... +..++..++|.+.+++.++.|+++.
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~------e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~ 400 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALT------EVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAA 400 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH------HHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchH
Confidence 4455566666665444444555 99999999999998644 4444577899999999999886433
No 181
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.09 E-value=1.2e-09 Score=102.84 Aligned_cols=140 Identities=14% Similarity=0.119 Sum_probs=107.6
Q ss_pred CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccc
Q psy10432 46 GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFE 124 (440)
Q Consensus 46 g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 124 (440)
+.+..+.+...++..+...+..+..|++.||+|||+.+.++..+.++. .+...+++.+.+++.++++|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777777777766679999999999999999988888887 5656788898889999999988766533222
Q ss_pred hhhhccccccccccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHH
Q psy10432 125 SWYVNEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFI 193 (440)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 193 (440)
.+. .+..+++.++...+. .+....+|..++|.++|++.+..|| +..|.+.++..++..+..
T Consensus 330 ~~~------~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~--~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYI------TSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF--QGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHH------HHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence 222 366677777776665 5788999999999999999999898 888887777666555443
No 182
>KOG4686|consensus
Probab=99.08 E-value=9.8e-10 Score=92.76 Aligned_cols=148 Identities=21% Similarity=0.232 Sum_probs=110.4
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh--hhhcccchhHHHHHHHHHHHHHHhhhc
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC--CLTKFSSDFYILLYGRLFGGIATSILF 120 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~~~~~ 120 (440)
+.+|.|+...+-+.+.-+.++...+|+.|.++||+|++...+.+..+..+. ....+ +++.=+++..+.|+..+...
T Consensus 293 ~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllA 370 (459)
T KOG4686|consen 293 KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLA 370 (459)
T ss_pred HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHH
Confidence 789999999998999999999999999999999999999888876665554 33333 23333566777888877664
Q ss_pred cccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHHHHHHHHHHhcc
Q psy10432 121 SGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLLGSTLFIYFCWE 198 (440)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (440)
.+.-..++ ...|+++.|++.|..++..++|..+-|.++|.+.+.-| +-+.-.|.+......+....+.+.+.
T Consensus 371 cslWP~va------~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 371 CSLWPCVA------SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred HHHhhhhh------hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 43333455 88999999999999999999999999999999988754 32355555555544444444444443
No 183
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.08 E-value=3.8e-09 Score=102.51 Aligned_cols=139 Identities=10% Similarity=0.105 Sum_probs=109.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|++.|| +|+|+.+..+..+..++.+.. ... ++ .. ..+..-.+.+++.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~--~~--~~-----~l~~~~~~~G~~~~ 105 (485)
T TIGR00711 37 SQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSLLC-GVA--PN--LE-----LMIIFRVIQGFGGG 105 (485)
T ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-hCc--CC--HH-----HHHHHHHHHHhhhh
Confidence 678899999999999999999999998 999999988888777766554 211 11 11 34445556666777
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
...+....++.|..|+++|+++.++......+|..++|.+ + +.+.+ ..++++.|.+.+...++..++...
T Consensus 106 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~--~-~~l~~-~~~w~~~f~~~~~~~~~~~~~~~~ 175 (485)
T TIGR00711 106 PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL--G-GWIIE-NYHWRWIFLINVPIGIIVVVVAFF 175 (485)
T ss_pred hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc--H-hHhcc-CcCceehhhhhhHHHHHHHHHHHH
Confidence 7888899999999999999999999999999999999983 4 66777 788999998877666655554443
No 184
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.07 E-value=3e-09 Score=101.95 Aligned_cols=153 Identities=10% Similarity=-0.038 Sum_probs=95.0
Q ss_pred hhhhhHhhhHh-hcCCChhhHHHHHHHHHHHHhhhhcccccccccc--chhHHH-HHHhHHHHHh-hhhc--ccchhHHH
Q psy10432 33 IQGPYVYKVYK-DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF--GRKLIC-ISYGIVYTLC-CLTK--FSSDFYIL 105 (440)
Q Consensus 33 ~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l-~~~~~~~~~~-~~~~--~~~~~~~l 105 (440)
....++|...+ +.|.+..+.+....+......+..++.|+++||+ +||+.. +....+..++ .... ...+.+..
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 34556766665 4788888887766655555555557999999999 555432 2222333333 2221 23344444
Q ss_pred HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhcccCchhhHHHHHH
Q psy10432 106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAI-VSGFTAHFFADILNLGPIAPFAVAIP 184 (440)
Q Consensus 106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw~~~~~~~~~~~ 184 (440)
.+..++.|.+.....+....... |.+|+++|+++.|+.+....+|.. .||.+.+.+.++.|| +..|.+...
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~--~~~f~~~~~ 422 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHAL------ELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW--DGGFMVMIG 422 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHH------HHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc--hHHHHHHHH
Confidence 44445555433222111112233 899999999999999988888754 589999999999998 777766665
Q ss_pred HHHHHHHHH
Q psy10432 185 FLLGSTLFI 193 (440)
Q Consensus 185 ~~~~~~~~~ 193 (440)
..++..+..
T Consensus 423 ~~~~~~~~~ 431 (452)
T PRK11273 423 GSILAVILL 431 (452)
T ss_pred HHHHHHHHH
Confidence 555444443
No 185
>KOG0637|consensus
Probab=99.05 E-value=1.5e-08 Score=91.68 Aligned_cols=255 Identities=16% Similarity=0.089 Sum_probs=154.0
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHHHHHH-hHHHHHh-hhhcccchhH-
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLICISY-GIVYTLC-CLTKFSSDFY- 103 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~-~~~~~~~~~~- 103 (440)
...-..+.+|..+++|++....+.+...+-+.+.+.+|+.|..+| |+||||..+.. ....+++ .+..++.++.
T Consensus 48 wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~ 127 (498)
T KOG0637|consen 48 WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGL 127 (498)
T ss_pred HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhH
Confidence 444566788888999999999989999999999999999999999 68999887664 4445555 4666554432
Q ss_pred ----------------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhH-HHHHHHHHHHHHHHHHHHHHHH
Q psy10432 104 ----------------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNL-TFARATFGSGLFAIVSGFTAHF 166 (440)
Q Consensus 104 ----------------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~ 166 (440)
.++++-.+.-++.......+-+++. |...++++.+ +++.+.....+|..+|..++.
T Consensus 128 ~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~------Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~- 200 (498)
T KOG0637|consen 128 LLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLA------DLARGDAKKTRANSVFSFFMAVGNVLGYALGS- 200 (498)
T ss_pred HhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHH------HhccChhhhhccchhHHHHHHhcceeeeeccc-
Confidence 3344445555556566554444555 9998888777 999999999999999988886
Q ss_pred HHhhcccCchhhHHHHHHHHHHHHHHHHHhcc-------cc----------CCCCCc---cCC-CCccchhhhhhhhcc-
Q psy10432 167 FADILNLGPIAPFAVAIPFLLGSTLFIYFCWE-------EH----------YDPKTA---KSS-LLPNSMFSSLKFLFT- 224 (440)
Q Consensus 167 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-------e~----------~~~~~~---~~~-~~~~~~~~~~~~~~~- 224 (440)
+.+|+-..+|.......+.+..+-..+.. ++ +...+. +.+ .+.....+.+..+.+
T Consensus 201 ---y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~~~~m 277 (498)
T KOG0637|consen 201 ---YLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFGALKVM 277 (498)
T ss_pred ---ccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCcchHHHHhchHhhC
Confidence 34554445554443333322222211111 11 100000 000 000011112222222
Q ss_pred CcchHHHHHHHHHHHhHHHHHHHhhhhh-----hhcc---------------C-CchhhHHHHHHHHHHHHHHHHHHHHh
Q psy10432 225 NPCLLTLGIVQSIYEGIMYTFIFVWTPV-----LEVL---------------S-PPLGLVFSCFMISIMIGSKIYSILIL 283 (440)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---------------~-~~~g~~~~~~~~~~~~~~~~~g~l~~ 283 (440)
.|..+...+...+.+.+.+.+..+.... |+.. + ..-.+-+.++.+...+.+....++.|
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667777777777666654444333 3111 0 11234455666777778889999999
Q ss_pred hccCCchhHHHHH
Q psy10432 284 KYFKPETMLTLTV 296 (440)
Q Consensus 284 r~~~~~~~~~~~~ 296 (440)
| +|.|+++..+.
T Consensus 358 ~-~g~r~~y~~~~ 369 (498)
T KOG0637|consen 358 K-FGTRKRYWGGV 369 (498)
T ss_pred h-cCcceEEeehh
Confidence 7 99666544443
No 186
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.05 E-value=7.1e-09 Score=98.08 Aligned_cols=129 Identities=9% Similarity=-0.075 Sum_probs=95.7
Q ss_pred HhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc-----cchhHHHHHHHH
Q psy10432 38 VYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF-----SSDFYILLYGRL 110 (440)
Q Consensus 38 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~-----~~~~~~l~~~r~ 110 (440)
.|.+. +++|.++.+.++..........+..++.|+++||+|+|+.+..+..+..++ .+... .++.+.+++..+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 34443 668899888887554444444444479999999999999988888777666 33322 245666778889
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
+.|++.+...+....... . .++++|++..+..+....+|..+|+.+++.+.+..++
T Consensus 318 ~~g~g~~~~~~~~~~~~~------~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 373 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTL------F-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGN 373 (406)
T ss_pred HHHHHHHHHhhhHHHHHh------h-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCch
Confidence 999999887665444332 3 3458999999999999999999999999999887776
No 187
>TIGR00898 2A0119 cation transport protein.
Probab=99.04 E-value=5.1e-09 Score=102.09 Aligned_cols=146 Identities=13% Similarity=0.087 Sum_probs=99.2
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchh--HHHHHHHHHHHHHHhhh
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDF--YILLYGRLFGGIATSIL 119 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~--~~l~~~r~l~G~~~~~~ 119 (440)
++++.+......+..+..+.+.+ +.+++.||+|||+.+..+.++.+++ ++..+.++. +...+..++.+++.+..
T Consensus 351 ~~~~~~~~~~~~~~~~~~i~~~~---~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (505)
T TIGR00898 351 GNLGGNIYLDLFISGLVELPAKL---ITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSA 427 (505)
T ss_pred cccCCChHHHHHHHHHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHH
Confidence 45555544443444444444554 8899999999999999988888877 444444433 44455556666666665
Q ss_pred ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432 120 FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEE 199 (440)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e 199 (440)
.+....+.. |.+|++.|++++|+.+....+|.+++|.+.+ +.+. ++ ..++.+.+...++..+. ..++||
T Consensus 428 ~~~~~~~~~------e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~~--~~~~~~~~~~~~~~~~~-~~~lpe 496 (505)
T TIGR00898 428 FQMVYLYTA------ELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-WL--FLPLVLFGGLALLAGIL-TLFLPE 496 (505)
T ss_pred HHHHHHHhc------ccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-HH--hhHHHHHHHHHHHHHHH-HHcCcC
Confidence 554444555 9999999999999999999999999999998 4443 44 45665555555544444 346787
Q ss_pred cCC
Q psy10432 200 HYD 202 (440)
Q Consensus 200 ~~~ 202 (440)
+..
T Consensus 497 t~~ 499 (505)
T TIGR00898 497 TKG 499 (505)
T ss_pred CCC
Confidence 654
No 188
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.04 E-value=1e-08 Score=96.76 Aligned_cols=141 Identities=11% Similarity=0.203 Sum_probs=91.2
Q ss_pred hHhhcCCChhhHHHHHHH-HHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh---hccc-chhHHHHHHHH----
Q psy10432 41 VYKDYGYDEKNIALLYIA-GFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL---TKFS-SDFYILLYGRL---- 110 (440)
Q Consensus 41 ~~~~~g~s~~~~~~~~~~-~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~---~~~~-~~~~~l~~~r~---- 110 (440)
+.+++|.++++++++... +.....+..++.|++.||+|||+.+..+..+..+. .. .++. ++.+.+++.-+
T Consensus 236 l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
T PRK11902 236 LIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENL 315 (402)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 336689999999887643 33333444469999999999999887766665544 21 2333 45565555544
Q ss_pred HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 190 (440)
..|++.+...+... .++++..|.+++ +..+...++|...++.++|.+.+++|| +..|...+.+.++..
T Consensus 316 ~~g~~~~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~--~~~f~~~~~~~~~~~ 383 (402)
T PRK11902 316 CGGMGTAAFVALLM------ALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGW--PGFYLMTVVIALPGL 383 (402)
T ss_pred HHHHHHHHHHHHHH------HhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHH
Confidence 44454555433333 333366665544 555556677877677789999999999 888877777666554
Q ss_pred HHH
Q psy10432 191 LFI 193 (440)
Q Consensus 191 ~~~ 193 (440)
++.
T Consensus 384 ~~~ 386 (402)
T PRK11902 384 ALL 386 (402)
T ss_pred HHH
Confidence 443
No 189
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.03 E-value=1.6e-09 Score=101.32 Aligned_cols=139 Identities=17% Similarity=0.175 Sum_probs=105.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.+++.+...++..++.++.|++.|| +++|+.+..+..+..++.+.. .... . .. ..+....+.+++.+
T Consensus 30 ~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~~---~-~~-----~~~~~~~~~g~~~~ 98 (379)
T TIGR00881 30 TDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFF-GFST---S-LW-----VMAALWALNGIFQG 98 (379)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHH-HHhh---h-HH-----HHHHHHHHHHhhcc
Confidence 778999999999999999999999998 999999998888777766555 2211 1 11 34445555666777
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
...+...+++.|..|+++|+++.++.+....+|..++|.+. + ....+ ..+++..|.+.+++.++..+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 99 MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLV-L-FGIAE-LYSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHH-H-HHHHh-cCCchhHHHHHHHHHHHHHHHHh
Confidence 78889999999999999999999999999999999999422 2 23334 56778888887766655444443
No 190
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.02 E-value=1.6e-08 Score=97.88 Aligned_cols=176 Identities=10% Similarity=0.083 Sum_probs=116.9
Q ss_pred hccCcc-hHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHHH
Q psy10432 222 LFTNPC-LLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLT 295 (440)
Q Consensus 222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~~ 295 (440)
.+++|+ ++......++...+++......+.++ +..+ .+.+..............++.|++.|| + |+|+.+..+
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr-~~G~r~~~~~g 94 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDK-VLGTKRVIMLG 94 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHH
Confidence 345664 66666666666666666655444444 3334 344555555444444555789999996 6 999999988
Q ss_pred HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhHHHH
Q psy10432 296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFITCF 373 (440)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~ 373 (440)
..+..++...+ .+.. . ... ...++..+.+++.|...|...++..+.+|++ ++++++++.++..++|..+
T Consensus 95 ~~~~~ig~~l~-~~~~--~-~~~-----~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 95 AIVLAIGYALV-AWSG--H-DAG-----IVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred HHHHHHHHHHH-HHhc--c-cHH-----HHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 88877765444 2211 1 111 2334445566678878888888889888754 3556788889999999999
Q ss_pred HHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 374 TLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
+|.+. +.+.+ ..||+..|.+.++..+++.+....
T Consensus 166 gp~i~---g~l~~-~~g~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 166 SMLAT---PWLAA-KYGWSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHH---HHHHH-hhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99944 67777 789999999988766665544433
No 191
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.01 E-value=1.6e-08 Score=96.35 Aligned_cols=129 Identities=11% Similarity=0.109 Sum_probs=100.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|++.|| +|+|+.+..+.....++.+.. .+..+ .. ...+.-.+.+++.+
T Consensus 53 ~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~-~~~~~----~~-----~l~~~r~l~G~g~g 121 (426)
T PRK12307 53 MEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAYSVGTGLS-GLASG----VI-----MLTLSRFIVGMGMA 121 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHH-HHHhH----HH-----HHHHHHHHHHHHHh
Confidence 677888999999999999999999998 999999998888887776554 22111 11 23444445566677
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC 401 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (440)
...+....++.|..|+++|+++.++......+|..+++.+. +...+ ..+++..|.+....
T Consensus 122 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~---~~l~~-~~~w~~~f~i~~~~ 181 (426)
T PRK12307 122 GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM---PSFAE-AYGWRAAFFVGLLP 181 (426)
T ss_pred hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH---HHHcc-cCCHHHHHHHHHHH
Confidence 77888888999999999999999999999999999988743 44555 67889988875433
No 192
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.00 E-value=1.2e-08 Score=98.14 Aligned_cols=175 Identities=13% Similarity=0.103 Sum_probs=120.3
Q ss_pred chHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432 227 CLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS 302 (440)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 302 (440)
.++........-..++|........++ +..+ .+.+.....+.....+..++.|+++||++|+|+.+..+..+..++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG 94 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence 344455555555566655544444444 3233 556666666666677777899999995489999999999988888
Q ss_pred HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhHHHHHHHHhhc
Q psy10432 303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFITCFTLIFIKN 380 (440)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~~~ 380 (440)
.+.+ .+.... . . ....+..+.+.+.|...|...+++.|.+|++ +|++++++.....++|..++|.+ +
T Consensus 95 ~~~~-~~~~~~---~-~----ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l--~ 163 (489)
T PRK10207 95 YFMT-GMSLLK---P-D----LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL--A 163 (489)
T ss_pred HHHH-HHhccc---h-h----HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH--H
Confidence 7666 321110 1 1 1234455566778888898899999999877 45788999999999999999983 4
Q ss_pred cccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 381 EDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.+.+ ..||+..|.+.++..+++.+.....++
T Consensus 164 -g~l~~-~~gw~~~F~i~~i~~~~~~~~~~~~~~ 195 (489)
T PRK10207 164 -PVIAD-KFGYSVTYNLCGAGLIIALLVYFACRG 195 (489)
T ss_pred -HHHHH-hhChHHHHHHHHHHHHHHHHHHHHcch
Confidence 67777 779999999877655555544444443
No 193
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.00 E-value=6.2e-09 Score=97.45 Aligned_cols=138 Identities=10% Similarity=0.137 Sum_probs=106.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|++.|| ++||+.+..+.....++.... .... + .. .......+.+++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~-~~~~--~--~~-----~~~~~~~l~g~~~~ 94 (377)
T PRK11102 26 GSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVAC-ALAQ--T--ID-----QLIYMRFLHGLAAA 94 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHH-HHHc--c--HH-----HHHHHHHHHHHHHH
Confidence 678889999999999999999999997 999999888887777766555 2211 1 11 23444445566677
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
...+...+++.+..|+++|+++.++.+....++..++|.+. +...+ ..+++..|.+.+...++..+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIG---GWLLV-WFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HcChHHHHHHHHHHHHHHHHHHH
Confidence 77788888999999999999999999999999999999843 55656 67888888887776666554443
No 194
>KOG1330|consensus
Probab=99.00 E-value=1.2e-09 Score=98.97 Aligned_cols=146 Identities=14% Similarity=0.219 Sum_probs=116.7
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHH
Q psy10432 255 VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEI 334 (440)
Q Consensus 255 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (440)
......|++.....+..++++++.|.+.|| ++|++++.++..+-.++.+.. .+. ...| ...+.=.+.++
T Consensus 65 i~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~iW~~Av~~~-~fs---~~Fw------q~~l~R~~vGi 133 (493)
T KOG1330|consen 65 ISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIFIWTLAVFAS-GFS---NHFW------QVLLCRGFVGI 133 (493)
T ss_pred CCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHHHHHHHHHHH-HHH---HHHH------HHHHHHHHhcc
Confidence 334788999999999999999999999998 999999999988887776555 211 1112 34555556666
Q ss_pred hhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 335 SVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 335 ~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+...+.|..+++++|.+|+++|++++++.++....|..+|-. .+ ..+.+....|++.|...+++.++..++...+.+
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~v--vg-s~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYV--VG-SVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEE--ee-eeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 777799999999999999999999999999999999988877 45 566663344899999999988888777766655
No 195
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.00 E-value=5.7e-09 Score=99.80 Aligned_cols=120 Identities=17% Similarity=0.215 Sum_probs=93.6
Q ss_pred ChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-chhHHHHHHHHHHHHHHhhhccccch
Q psy10432 48 DEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-SDFYILLYGRLFGGIATSILFSGFES 125 (440)
Q Consensus 48 s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 125 (440)
++.+.+....+..+...+..+++|+++||+|||+.+..+..+..++ +...+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566555555666666689999999999999999998887777 443333 46677777888899998888776666
Q ss_pred hhhcccccccccc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 126 WYVNEHLNYYLFP-------VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 126 ~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
.+. |..| ++++|...|+.+....+|..+++.+.+.+.+..|+
T Consensus 335 ~~~------~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 335 LVA------DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHh------hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 665 6654 45679999999999999999999999999998777
No 196
>KOG3626|consensus
Probab=99.00 E-value=1.3e-08 Score=98.59 Aligned_cols=258 Identities=13% Similarity=0.113 Sum_probs=174.0
Q ss_pred HhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--------------
Q psy10432 38 VYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-------------- 99 (440)
Q Consensus 38 ~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-------------- 99 (440)
+..+-+.++++.++.|+ .+-++.....+ +..+..-|..|-|.+-.|.++++++ +++++-
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~---fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLII---FVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhH---hHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 33444789999999887 45556666555 8888899999988888888888887 544321
Q ss_pred ------c-----------------------------h--hH-HHHHHHHHHHHHHhhhccccchhhhccccccccccchh
Q psy10432 100 ------S-----------------------------D--FY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEW 141 (440)
Q Consensus 100 ------~-----------------------------~--~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (440)
+ + ++ .++++.++.|+|....+|...+++= |...+++
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD------Dnvk~~~ 270 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID------DNVKKKN 270 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc------ccccccC
Confidence 0 0 22 5678899999999999886666665 9999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------cc--CchhhHHHHHHHHHHHHHHHHHhccccCCCC
Q psy10432 142 LNLTFARATFGSGLFAIVSGFTAHFFADIL---------------NL--GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPK 204 (440)
Q Consensus 142 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------gw--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 204 (440)
-+..+|+......+|.++|-++|+++.+.+ .| .|..-|++.+.+.++..+..+++ |...++.
T Consensus 271 SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f-Pk~lp~~ 349 (735)
T KOG3626|consen 271 SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF-PKELPKS 349 (735)
T ss_pred CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC-cccCccc
Confidence 999999999999999999999999986543 12 11344555565666555554444 5433321
Q ss_pred Cc------------c------CCC---CccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432 205 TA------------K------SSL---LPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP 259 (440)
Q Consensus 205 ~~------------~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 259 (440)
++ + +.. +.+++....+++++||.+....+...+-...+..+.++.+.++ ++++ ..
T Consensus 350 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~ 429 (735)
T KOG3626|consen 350 QKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASL 429 (735)
T ss_pred cccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH
Confidence 10 0 000 1124455678899999999988888887777777777566666 5566 34
Q ss_pred hhhHHHHHHH-HHHHHHHHHHHHHhh-ccCCchhHHHHHHHHHHHHHH
Q psy10432 260 LGLVFSCFMI-SIMIGSKIYSILILK-YFKPETMLTLTVYLATFSITV 305 (440)
Q Consensus 260 ~g~~~~~~~~-~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~ 305 (440)
+..+.....+ +..+|.+++|++.+| +.+.|....+..+...+..+.
T Consensus 430 An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 430 ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 4444433333 455677889999987 345555565555555554444
No 197
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.00 E-value=8.1e-09 Score=94.65 Aligned_cols=149 Identities=11% Similarity=0.149 Sum_probs=118.5
Q ss_pred CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccc
Q psy10432 46 GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFE 124 (440)
Q Consensus 46 g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 124 (440)
+.+....|.+.+++...-.+.-.+..++.+|+|.|+.++++..+.++= .+++++++.+.+.+.+.+.|+-.+..
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~----- 329 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLL----- 329 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHH-----
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHH-----
Confidence 344556777777777777766678999999999999999998888886 78999999999999999999999998
Q ss_pred hhhhccccccccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432 125 SWYVNEHLNYYLFPVEWLNLTFARA-TFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYD 202 (440)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 202 (440)
.+....++++.+|+|-.++...+. +...++|..+.+.++|.+.|+.|. +..|++.+.+.+...++..+.++++++
T Consensus 330 -lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~--~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 330 -LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGF--QHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp -HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred -HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCc--HHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 555666666999998888888885 788999999999999999999998 777777777777667777777766544
No 198
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.00 E-value=3.1e-08 Score=95.44 Aligned_cols=144 Identities=10% Similarity=0.001 Sum_probs=93.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.+...+...++..++.++.|++.|| +|+|+.+..+.+...++.+.. .+.. + .. ..+....+.+++.+
T Consensus 71 ~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~~~~~~-~~~~--s--~~-----~l~~~r~l~G~~~~ 139 (476)
T PLN00028 71 SDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAPAVFCM-SLVS--S--AT-----GFIAVRFFIGFSLA 139 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHH-HHhc--C--HH-----HHHHHHHHHHHHHH
Confidence 567777788888999999999999998 999998887776666655433 2211 1 11 12222233344444
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc-ccc----cCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE-DAE----GGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
...+ ....+.+.+|+++||++.|+.+...++|..+++.+.... ... .+...+|+..|.+.+++.++..+....+
T Consensus 140 ~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 140 TFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred hhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 445678889999999999999888778777766533110 101 1113589999999888776665555444
Q ss_pred h
Q psy10432 413 K 413 (440)
Q Consensus 413 ~ 413 (440)
.
T Consensus 219 ~ 219 (476)
T PLN00028 219 G 219 (476)
T ss_pred c
Confidence 3
No 199
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.00 E-value=1.2e-08 Score=91.60 Aligned_cols=150 Identities=14% Similarity=0.189 Sum_probs=110.2
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-------chhHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-------SDFYI 104 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-------~~~~~ 104 (440)
+...+|.++ ++||.++.+.|.....+..++.+..|.+|+++||+|.+|++.......+++ .+.... ++...
T Consensus 237 fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (417)
T COG2223 237 FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVV 316 (417)
T ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHH
Confidence 555665555 789999999999999999999999999999999999999988877777776 433222 33333
Q ss_pred ----HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432 105 ----LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180 (440)
Q Consensus 105 ----l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 180 (440)
++...+..|+|.|..+ .++. .++| ++-+.+.|+.....++|...-|..-+...+..| .+...|+
T Consensus 317 ~~~~~l~l~~~~G~GnGsvf----k~Ip------~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg-~~~~~f~ 384 (417)
T COG2223 317 FVAVFLALFVFAGLGNGSVF----KMIP------VIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG-SYTGAFM 384 (417)
T ss_pred HHHHHHHHHHHhccCcchhe----eech------HHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc-cHHHHHH
Confidence 3445555666655543 3444 6664 488999999999999999888988888888877 3366776
Q ss_pred HHHHHHHHHHHHHHH
Q psy10432 181 VAIPFLLGSTLFIYF 195 (440)
Q Consensus 181 ~~~~~~~~~~~~~~~ 195 (440)
+.....+++.+..+.
T Consensus 385 ~~~~~~~~a~v~~~~ 399 (417)
T COG2223 385 LLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666655554443
No 200
>PRK11043 putative transporter; Provisional
Probab=98.99 E-value=2.5e-08 Score=94.21 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=103.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|++.|| +++|+.+..+.....++.+.. .+. ++ .. .......+.+++.+
T Consensus 41 ~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~--~~--~~-----~l~~~~~l~G~~~~ 109 (401)
T PRK11043 41 SAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGM-LWV--ES--AA-----QLLVLRFVQAVGVC 109 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHH-HHh--cC--HH-----HHHHHHHHHHhhhH
Confidence 778899999999999999999999998 999999888877666655444 211 11 11 23333334444455
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
...+.....+.|..|++++++..+..+....++..++|.+ + +...+ ..+++..|.+.++..++..+.....++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~-~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 110 SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLL--G-AWLLN-HFGWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHh-cCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5566667788888899999999999888888999999984 3 56666 778899998887776666555444433
No 201
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.98 E-value=2.5e-08 Score=95.07 Aligned_cols=150 Identities=16% Similarity=0.149 Sum_probs=89.1
Q ss_pred hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hh---cccchhHHHHH
Q psy10432 34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LT---KFSSDFYILLY 107 (440)
Q Consensus 34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~---~~~~~~~~l~~ 107 (440)
...++|... +++|.+..+.+....+......+.+++.|+++||+|||+.+..+..+..+. . .. ...++....+.
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 445666655 568888888888777777777777778999999999999877765544333 2 11 11223332222
Q ss_pred HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432 108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGL-FAIVSGFTAHFFADILNLGPIAPFAVAIPFL 186 (440)
Q Consensus 108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~ 186 (440)
.-.+.+...+...+...++.. |.+|++.|+.+.|+.+...++ .....|.+.+.+ +..|+ +...++..+...
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~------e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~-~~~~~~~~~~~~ 413 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKA------EMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGM-ETAFFWYVTLMA 413 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCC-CcHHHHHHHHHH
Confidence 222222233333232333445 999999999999998766554 344577777755 44453 134444444444
Q ss_pred HHHHH
Q psy10432 187 LGSTL 191 (440)
Q Consensus 187 ~~~~~ 191 (440)
++..+
T Consensus 414 ~i~~~ 418 (432)
T PRK10406 414 VVAFL 418 (432)
T ss_pred HHHHH
Confidence 43333
No 202
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=1.2e-08 Score=94.69 Aligned_cols=133 Identities=11% Similarity=0.000 Sum_probs=98.4
Q ss_pred hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432 33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL 110 (440)
Q Consensus 33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 110 (440)
....++|...++.|.+..+.+...++......+..++.|++.||+ +||+.+..+..+.+++ +...+.++..... .-+
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 344567677788899998988877776666666678999999999 5666777777777776 4444444333222 456
Q ss_pred HHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN 172 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 172 (440)
+.|++.+...|...+.+. +.. ++++++...++.+....++..++|.+.|.+.++.|
T Consensus 294 l~g~~~g~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIG------LRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHhhhhHhHHHHHHHH------HhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999888776555544 444 45677889999999999999999999999999875
No 203
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.96 E-value=2.7e-08 Score=93.70 Aligned_cols=135 Identities=7% Similarity=0.050 Sum_probs=99.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.++.|+++|| ++||+.+..+.....++.+.. ... ++ .. ..++...+.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~-~~~--~~--~~-----~l~~~~~~~g~~~~ 111 (394)
T PRK11652 43 GAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIFILGTLVA-LFA--HS--LT-----VLIAASAIQGLGTG 111 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHH-HHH--cc--HH-----HHHHHHHHHHhhhh
Confidence 778889999999999999999999998 999999888877776665444 211 11 11 23344444455555
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (440)
...+.......+..+++++++..+..+....++..++|.+. +...+ ..+++..|.+.++..++..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~---~~l~~-~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIG---GLLTT-LFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccChHHHHHHHHHHHHHHHH
Confidence 56666677778888889999999999998888888998843 55556 67889888887765554433
No 204
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.96 E-value=7.7e-09 Score=81.68 Aligned_cols=132 Identities=11% Similarity=0.155 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432 265 SCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG 344 (440)
Q Consensus 265 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (440)
....++.+++.+..+++.|| +++|+.+..+.....++.+.. ... ...+ .......+.+++.+...+...
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~g~~~~~~~~~~~ 73 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMF-ALS---SNIT------VLIIARFLQGFGAAFALVAGA 73 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHH-HHh---ccHH------HHHHHHHHHHHHHHHHHHhHH
Confidence 44567888999999999997 999998887777666665444 211 1111 234444556666777788888
Q ss_pred hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
....|..|+++|++..+..+....++..++|.+. +...+ ..+++..+.+.+...+++.+....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLG---GVLAQ-FLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhH---HHHhc-ccchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999844 55666 677888888877766666555443
No 205
>KOG3762|consensus
Probab=98.94 E-value=5.9e-08 Score=89.61 Aligned_cols=181 Identities=13% Similarity=0.046 Sum_probs=121.0
Q ss_pred hhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh-hhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH
Q psy10432 218 SLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP-VLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT 293 (440)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~ 293 (440)
...+++.+++...+.+...+...+.....+ +.. .++..+ ...|........+.++.-++.+++.+| +|+.+++.
T Consensus 363 ~~~~~~~s~~~llff~~av~mG~g~~lv~t-FLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~ 440 (618)
T KOG3762|consen 363 DVGKVFASPHILLFFFVAVVMGAGVGLVFT-FLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMY 440 (618)
T ss_pred HHHHHhcCCCEEehhHHHHHHHHHHHHHHH-HHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceee
Confidence 333566677766644444333333322222 221 113333 556777777778889999999999997 99999998
Q ss_pred HHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhh-hhHHH
Q psy10432 294 LTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT-NFITC 372 (440)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~ 372 (440)
.++.+..+=++.+ .+ ...+| ..+..=.+-++..+..+....++++...|++.+.++.++.+... .+|-.
T Consensus 441 lgLa~~~~Rf~~~-S~---L~n~W------~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g 510 (618)
T KOG3762|consen 441 LGLACNVGRFLYY-SY---LQNPW------MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKG 510 (618)
T ss_pred ehhhHHHHHHHHH-HH---hcCch------heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcc
Confidence 8887776655444 22 12223 22333345555688888899999999999999999999888644 56777
Q ss_pred HHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 373 FTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+|.+ ++ |...+ .++-+..|.++++.+++..+....+++
T Consensus 511 ~Gsl--IG-G~~v~-~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 511 LGSL--IG-GFVVE-RFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhhh--hh-hhhhe-eehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 7777 55 66767 788899999988887777666655544
No 206
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=3.2e-08 Score=92.29 Aligned_cols=164 Identities=15% Similarity=0.224 Sum_probs=117.8
Q ss_pred HHhhhhhHhhhHhhcC-CChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-chhHHHH-
Q psy10432 31 DWIQGPYVYKVYKDYG-YDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-SDFYILL- 106 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~~~~~l~- 106 (440)
......+.+...+|.| .+.+..+.+.+++...-.++-...+++..|+|.|+++.++.+..++= .+.+.. ++.+...
T Consensus 223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~ 302 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVA 302 (400)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4445566655558888 67777777777777665555568999999999999999999988885 555555 5544433
Q ss_pred ---HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccC----chhh
Q psy10432 107 ---YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLG----PIAP 178 (440)
Q Consensus 107 ---~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~----~~~~ 178 (440)
....++|+..+....+...++. +..|++.|+++.++++. ..++|..+|..++|++.|++|-+ +...
T Consensus 303 ~~~l~q~lhG~tf~~~~~a~~~yi~------~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 303 LQLLGQLLHGLTFGLFHAASVRYID------RIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHH------HhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 3356799999999665555555 99999999999999866 57899999999999999987641 1334
Q ss_pred HHHHHHHHHHHHHHHHHhcccc
Q psy10432 179 FAVAIPFLLGSTLFIYFCWEEH 200 (440)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~e~ 200 (440)
+.+.+.+.++..++.++..||+
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccCC
Confidence 4455555444455555555554
No 207
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.93 E-value=2.9e-08 Score=92.04 Aligned_cols=138 Identities=10% Similarity=0.012 Sum_probs=93.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
..+.|+..+...++..++++..|++.|| ++||+.+.........+. .. .. ..+ .+. ..+..-.+.+++.
T Consensus 25 ~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~-~~-~~-~~~--~~~-----~l~~~R~l~G~g~ 93 (368)
T TIGR00903 25 KEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAA-GR-LL-DPF--NYE-----WLLACQLLAALGQ 93 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHH-HH-HH-Hhc--cHH-----HHHHHHHHHHhHh
Confidence 3778899999999999999999999998 998776554433332222 11 11 101 111 2333333444555
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
+. .+.......|..|+++|+++.++.+....+|..+++.+ + ..+.+ ..+|+..|.+.+++.++..++.+
T Consensus 94 ~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~--~-~~l~~-~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 94 PF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAA--G-LKIYT-AGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHH-ccchHHHHHHHHHHHHHHHHHHH
Confidence 54 33444455788899999999999999999999999873 3 55656 78999999997776655544433
No 208
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.93 E-value=4.3e-08 Score=92.76 Aligned_cols=137 Identities=10% Similarity=0.039 Sum_probs=100.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
...+...+.+.++..++.+..|+++|| +|||+.+..+.....++.+.. ... ++ .. ..+..-.+.+++.+
T Consensus 51 ~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~-~~a--~~--~~-----~l~~~r~l~Gi~~~ 119 (413)
T PRK15403 51 SLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAAT-LFT--TS--MT-----QFLIARFIQGTSIC 119 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHH-HHc--CC--HH-----HHHHHHHHHHHHHH
Confidence 566778888889999999999999998 999999888877776665444 221 11 11 23333333444444
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (440)
...+.......|..|++++++.++..+....++..++|. .+ +.+.+ ..+|+..|.+.++..+++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--lg-~~l~~-~~gw~~~f~~~~~~~~i~~~~~ 187 (413)
T PRK15403 120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPL--SG-AALMH-FVHWKVLFAIIAVMGLIAFVGL 187 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hcCHHHHHHHHHHHHHHHHHHH
Confidence 445556677888889999999999999999999999988 34 55556 6789999999887766665543
No 209
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.92 E-value=6.8e-08 Score=91.12 Aligned_cols=113 Identities=15% Similarity=0.139 Sum_probs=89.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.|+..+...++..++++..|++.|| +|+|+.+..+..+.+++.+.. ....... .+. ..+....+.+++.|
T Consensus 38 ~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~-~~~~~~~-~~~-----~~l~~~~l~G~g~g 109 (410)
T TIGR00885 38 FQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLF-WPAAEIM-NYT-----LFLVGLFILTAGLG 109 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHH-HHHHhhc-cHH-----HHHHHHHHHHhhHH
Confidence 678999999999999999999999998 999999999998888876554 2111111 121 34455556677788
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
...+..+.++.+..|++++++..++.+...++|..++|.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~ 150 (410)
T TIGR00885 110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVA 150 (410)
T ss_pred HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999998743
No 210
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.92 E-value=1.6e-08 Score=108.65 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=109.5
Q ss_pred hhhHhhhH-hhcCCChh-hHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432 35 GPYVYKVY-KDYGYDEK-NIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF 111 (440)
Q Consensus 35 ~~~~~~~~-~~~g~s~~-~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 111 (440)
...++... +++|.+.. +.++++....+...+.+++.|+++||+++|+.+.++.++.+++ .+..+..+.+.+++..++
T Consensus 252 ~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 252 QANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred HHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 33444444 66888888 8887666666555555679999999999999888888877777 566667788888888999
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPF 185 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~ 185 (440)
.|++.+...+...+++. +..|+++|+++++..+....+|.++++.+++.+.. .++.+...+.+.+.+
T Consensus 332 ~g~~~~~~~~~~~~~~~------~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 332 FGFSAGLFIVPLNALIQ------FRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHhhHHHHHHHh------hcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHH
Confidence 99999988776666666 99999999999999999999999888888877654 344334445444433
No 211
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.91 E-value=1.4e-07 Score=88.61 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=95.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhh-hccccchhhcchhHHHHHHHHHHHhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLT-SSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
.+.+++.+...++..+.++..|++.|| +|.|+....+..+..+..+.. .+. ......+. ..++.-.+.+++
T Consensus 70 ~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~i~~~~~-~~a~~~~~~s~~-----~lli~r~l~Gig- 141 (462)
T PRK15034 70 DQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILIIPCVWL-GIAVQNPNTPFG-----IFIVIALLCGFA- 141 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHH-HHHHcccCCCHH-----HHHHHHHHHHHH-
Confidence 778888898999999999999999998 999999888888877666544 221 11111121 233333344444
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH----Hhh-----ccccc-----cCccchhhHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI----FIK-----NEDAE-----GGKLIAIHSVFVVCTACL 402 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~----~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~ 402 (440)
|..++.....+++.+|+++||++.|+....+++|..+++. +.. ..+.. .+...+++.+..+.....
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 5577788888999999999999999997666676654443 221 00110 011334666666666666
Q ss_pred HHHHHHHHHhh
Q psy10432 403 LVALLASCVFK 413 (440)
Q Consensus 403 ~~~~~~~~~~~ 413 (440)
++..++.++..
T Consensus 222 iv~~i~~~~~~ 232 (462)
T PRK15034 222 AIATIAAWSGM 232 (462)
T ss_pred HHHHHHHHHhC
Confidence 55555555443
No 212
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.91 E-value=3.2e-08 Score=96.25 Aligned_cols=128 Identities=16% Similarity=0.015 Sum_probs=79.3
Q ss_pred ccccccccccchhHHHHHHhHHHHHh-hhhcccc----hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhh
Q psy10432 68 IVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL 142 (440)
Q Consensus 68 ~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 142 (440)
++.++++||+|||+.++.+..+.+++ .+.++.. +...+...-+...++.....+....+.. |.+|.+.|
T Consensus 353 ~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------E~~p~~~R 426 (502)
T TIGR00887 353 WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPG------EVFPTRYR 426 (502)
T ss_pred HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhh------ccCchhHH
Confidence 48899999999999988887776665 3332211 1111111111111111112222223334 99999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432 143 NLTFARATFGSGLFAIVSGFTAHFFADILN--------LGPIAPFAVAIPFLLGSTLFIYFCWEEHYD 202 (440)
Q Consensus 143 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 202 (440)
+++.++.+....+|.+++|.+.+.+.+..+ +.....+.+.++..++..+ ..+++||++.
T Consensus 427 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i-~~~~lpEt~~ 493 (502)
T TIGR00887 427 STAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL-FTLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH-HheEeccCCC
Confidence 999999999999999999999999887421 1113455555555444444 3456788754
No 213
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=1.1e-08 Score=92.09 Aligned_cols=150 Identities=16% Similarity=0.138 Sum_probs=114.1
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhcc
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFS 121 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 121 (440)
+++|++..++...-........+++.+.|++.||+|.|+++..+.++..+. +...+......+.+.-.+.|...|..+.
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 589999999987666666666666679999999999999999999988887 3333444455566677889999999877
Q ss_pred ccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432 122 GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH 200 (440)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~ 200 (440)
.+-++.. +.+|++|-++.+|+++.....+..+||.+-+.+.+..|- .|.-+.....+..+ .+.....+|++
T Consensus 361 ~SRSy~~------~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~-~r~g~~~i~vll~i-Gl~~L~~v~~~ 431 (438)
T COG2270 361 SSRSYLA------RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS-SRAGVLSIIVLLLI-GLLLLLRVKVP 431 (438)
T ss_pred HHHHHHH------HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHh-hHhhEEeecCC
Confidence 5555555 999999999999999999999999999999999988663 35554444444443 33334455554
No 214
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.90 E-value=6.6e-08 Score=90.09 Aligned_cols=137 Identities=15% Similarity=0.090 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHhHHHHHHHhhhh-hh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432 228 LLTLGIVQSIYEGIMYTFIFVWTP-VL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS 302 (440)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 302 (440)
++...+.....+...+.+.. +.| .+ +..+ .+.++..+...++..++.++.|++.|| +|+|+.+..+.....++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSP-LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIP 80 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHH-hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHH
Confidence 34444444444444433323 444 24 3333 678899999999999999999999998 99999998888887777
Q ss_pred HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
.+.. .+... . .. ...+...+.+++.+. .+....++.+..|+++|+++.++.....++|..+++.
T Consensus 81 ~~~~-~~~~~--~-~~-----~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 144 (366)
T TIGR00886 81 CLWA-GLAVQ--S-YS-----VLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF 144 (366)
T ss_pred HHHH-HHHhh--h-HH-----HHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH
Confidence 6555 22110 1 11 233333334444333 3456678889999999999999988777777766665
No 215
>KOG3574|consensus
Probab=98.88 E-value=3.1e-07 Score=81.15 Aligned_cols=329 Identities=10% Similarity=-0.012 Sum_probs=167.1
Q ss_pred hHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccc-----ccchhHHH------HHHhHHHHHh-hh---h---cc
Q psy10432 37 YVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD-----KFGRKLIC------ISYGIVYTLC-CL---T---KF 98 (440)
Q Consensus 37 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D-----r~Grr~~l------~~~~~~~~~~-~~---~---~~ 98 (440)
.+|-+.+.-|.|.++.+..-.+.+-.+. -..|.++.| |+||||.. ++|.++..++ .. . +-
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~P~sL--KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYWPFSL--KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhhHHHH--HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 6666667788888887653222222211 148999999 99999974 3444444444 21 1 12
Q ss_pred cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hc
Q psy10432 99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-------IL 171 (440)
Q Consensus 99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~ 171 (440)
.++...+...-++.-+..+...-+.+.|.. ...++|+.|.+......+.+.|..+|..+--.+.. ..
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwAL------tmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~r 203 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWAL------TMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLR 203 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHH------HhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHh
Confidence 234444444556666777777777777877 88889999998888888888887777654332221 11
Q ss_pred ccCc-------hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHH
Q psy10432 172 NLGP-------IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYT 244 (440)
Q Consensus 172 gw~~-------~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (440)
+|+- .......+.+.++...+..+.-+|++.+..++.+....+..+-++.+++-|.+..........-.++.+
T Consensus 204 s~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a 283 (510)
T KOG3574|consen 204 SIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQA 283 (510)
T ss_pred cCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhh
Confidence 2210 011122222333333444444344443323332223333344556677777777665555444444433
Q ss_pred HHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH----HHHHHHHHHHHHHHHHhhhcc---
Q psy10432 245 FIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML----TLTVYLATFSITVSTVLTSSL--- 313 (440)
Q Consensus 245 ~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--- 313 (440)
--. ..+.- -+.| +..++......-..++.....|++..+ ..+-.+. ..=........ .+.+.....
T Consensus 284 ~da-~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~-~~pl~~~lka~~~R~~~~~~~t-~Lv~~~~~~~~~ 360 (510)
T KOG3574|consen 284 ADA-LTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAG-PRPLNVFLKAVPYRLGGGLVQT-ALVWWTPTLGHS 360 (510)
T ss_pred hhh-ccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCC-CCcchHHHHhhhHHHHHHHHHH-HHHhhhcccccC
Confidence 322 22222 2222 444444333334445555555555442 1111111 11111111111 221221111
Q ss_pred ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
....+....-..+....+.+...-..+....+.-++..|+...|+.+.+.|+..++|+-.-..
T Consensus 361 ~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~t 423 (510)
T KOG3574|consen 361 DGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGT 423 (510)
T ss_pred CCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHH
Confidence 111111000011112223333333345566677788889999999999999999998755443
No 216
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.87 E-value=2e-08 Score=96.85 Aligned_cols=146 Identities=16% Similarity=0.043 Sum_probs=109.8
Q ss_pred hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432 254 EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE 333 (440)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (440)
+..+.+.|.+.+...++..++.+..|++.|| +++|+.+..+.++..++.+.. ....... .. ..++.-.+.+
T Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~-~~~~~~~--~~-----~l~~~r~~~G 142 (465)
T TIGR00894 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVI-PWAAGGG--IA-----LVVFCRVIQG 142 (465)
T ss_pred CCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHH-HHHHHcC--ch-----HHHHHHHHHH
Confidence 3444778899999999999999999999998 999999888887766665443 1111111 11 2333444566
Q ss_pred HhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc-chhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 334 ISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL-IAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
++.+...|....++.+..|+++|+++.|+.+....+|..+++.+. +.+.+ . .+++..|.+.++..++..++.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~---~~l~~-~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPIS---GWLCE-SWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 678888899999999999999999999999999999999999854 55555 5 488999998887766655544443
No 217
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.86 E-value=7.9e-07 Score=81.28 Aligned_cols=297 Identities=13% Similarity=0.063 Sum_probs=164.9
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccc
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLN 133 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 133 (440)
.-.+..+..-+ .+-+..+|+..+.=......+..++ ++.+++++.+.=+++-++.+++.|.......++.
T Consensus 67 adi~P~l~~Kl---~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt------ 137 (402)
T PF02487_consen 67 ADILPSLLVKL---IAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT------ 137 (402)
T ss_pred HHHHHHHHHHH---HhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH------
Confidence 33344444444 6677888887544455566677777 6788889999888899999888888765544443
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCC----cc--
Q psy10432 134 YYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKT----AK-- 207 (440)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~-- 207 (440)
..+++ ...+-++++.+.+.++|+..-..+.+ .|+..|..++....+.++..+..++.+|+++.+++ +.
T Consensus 138 -~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~ 211 (402)
T PF02487_consen 138 -HFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED 211 (402)
T ss_pred -HhcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC
Confidence 34443 46788888899999999988777777 78877877777665554444333444543321110 00
Q ss_pred ---CC--CCc-------cchhhhhhh-hccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hcc----CCchhhHHHHHH
Q psy10432 208 ---SS--LLP-------NSMFSSLKF-LFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVL----SPPLGLVFSCFM 268 (440)
Q Consensus 208 ---~~--~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~g~~~~~~~ 268 (440)
++ ..+ ...+..+++ ..+-|.++..++-.++.+..-|.......|.+ ... .....+....+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ 291 (402)
T PF02487_consen 212 EAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQ 291 (402)
T ss_pred cccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHH
Confidence 00 000 000111111 11112233344444455555554444444443 111 144455556666
Q ss_pred HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhc
Q psy10432 269 ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRG 348 (440)
Q Consensus 269 ~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 348 (440)
+|..+++--... ++-|++... .++..+-.+.+..-... ...|..+..+..+...+..-|..+......+.
T Consensus 292 ~GVFISRSS~~~-----~rir~lwil-s~LQ~~nl~~~~l~s~~----~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~ 361 (402)
T PF02487_consen 292 LGVFISRSSLPF-----FRIRRLWIL-SLLQVINLVFLLLQSWY----RFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS 361 (402)
T ss_pred HHHhhhhcceee-----eehhhHHHH-HHHHHHHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 666555433221 222333222 22222222222111100 11122223444445556667777777777778
Q ss_pred cCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 349 RIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 349 ~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
+..|+++|--.+|........|..++..
T Consensus 362 ~~~~~~~REFslg~vsvsds~GI~lAgl 389 (402)
T PF02487_consen 362 EEVPPEDREFSLGAVSVSDSLGILLAGL 389 (402)
T ss_pred hcCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8889999999999999998888888776
No 218
>KOG0569|consensus
Probab=98.84 E-value=1.4e-07 Score=88.43 Aligned_cols=164 Identities=15% Similarity=0.143 Sum_probs=114.6
Q ss_pred HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chh--H-
Q psy10432 32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDF--Y- 103 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~--~- 103 (440)
+....+...+.++-|.+..+..++......+..+...++..+.||+|||+.++.+..+..+. ++.... ... |
T Consensus 287 ~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~ 366 (485)
T KOG0569|consen 287 NAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL 366 (485)
T ss_pred ceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33445555777899999888877766666666666679999999999999999998888876 432221 112 1
Q ss_pred --HHHHHHHHHHHHHhhh-ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432 104 --ILLYGRLFGGIATSIL-FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180 (440)
Q Consensus 104 --~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~ 180 (440)
..+++.++..++.+.. .|.. + -+.+|.+|++.|+.+.+.......+...+-...-..+.+..|- +.|+
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~--~----fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---~~fi 437 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIP--W----FIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---YVFI 437 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchh--H----HHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---hhhH
Confidence 1234444444443333 1222 2 2244999999999999999999888887777777777777663 5666
Q ss_pred HHHHHHHHHHHHHHHhccccCCCC
Q psy10432 181 VAIPFLLGSTLFIYFCWEEHYDPK 204 (440)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~e~~~~~ 204 (440)
...+...+..+..++.+||++.+.
T Consensus 438 lF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 438 LFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHHHHHHHHhCcccCCCC
Confidence 666677777888899999997543
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.83 E-value=7.2e-08 Score=82.69 Aligned_cols=132 Identities=19% Similarity=0.181 Sum_probs=98.5
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc-------cchh
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF-------SSDF 102 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~-------~~~~ 102 (440)
...++.+-|++.+.+|.|.+|...+-..+..... ++++.|.+.||+|+|.++.+|.+...++ .+... ..++
T Consensus 18 ~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~-~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~ 96 (250)
T PF06813_consen 18 TYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSY-FGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPV 96 (250)
T ss_pred ccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccch
Confidence 3445667777779999999999887666666554 4678999999999999999999998888 43222 2467
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432 103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI 170 (440)
Q Consensus 103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 170 (440)
|.+.+..++.|.+.+...+++...-. +.+| ++||++.|+.-...+++..+-..+...+.+.
T Consensus 97 ~~~~~~~~l~~~s~~~~~ta~lvt~~------~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 97 WLMCLFLFLGGNSSCWFNTASLVTCV------RNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHHcccHHHhhhHHHHHHH------HhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 88888888888887776555444444 7786 5899999999999999876655555444443
No 220
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.80 E-value=2e-07 Score=84.34 Aligned_cols=140 Identities=12% Similarity=0.098 Sum_probs=98.0
Q ss_pred hhhhhHhhhHh---hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432 33 IQGPYVYKVYK---DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG 108 (440)
Q Consensus 33 ~~~~~~~~~~~---~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ 108 (440)
......+...+ .+|.++++.+..++.......+.....+++.||+|+||.+..+..+..++ .+....++... ...
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~ 236 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWF 236 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHH
Confidence 34444444443 36889888887655555555555569999999999999988877777666 34434443332 335
Q ss_pred HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432 109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI 183 (440)
Q Consensus 109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~ 183 (440)
-++.|++.+..+|...+... +..|+ +.+++.++. ....+|..++|++.|.+.|..|. +..+++..
T Consensus 237 ~~l~g~~~s~i~P~~~s~a~------~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~--~~a~~v~~ 301 (310)
T TIGR01272 237 VLALGLFNSIMFPTIFSLAL------NALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI--QLAFALPV 301 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHH------hhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc--hHHHHHHH
Confidence 56889999999998777777 76654 345566665 56778999999999999998887 66666433
No 221
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.80 E-value=3.9e-08 Score=91.27 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=86.9
Q ss_pred hhhhHhhhHhhcCCChhhHHHHHHHHH-HHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc-c----------c
Q psy10432 34 QGPYVYKVYKDYGYDEKNIALLYIAGF-ASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF-S----------S 100 (440)
Q Consensus 34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~-~----------~ 100 (440)
.....+...+++|.++++.+.+..+.. ....+..+++|++.||+|||+.+..+.++.+++ .+..+ . +
T Consensus 228 ~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (356)
T TIGR00901 228 ATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFP 307 (356)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Confidence 444555555779999999987665433 333333469999999999999988888777776 33222 1 4
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHH
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSG 154 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 154 (440)
+.+.+....++.+++.+...+...+++. |.+|+++|++.+++.++..+
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 308 HLLMLFLTITLEAVTGGLGTVAFVAFLS------KLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHH------HhcCCCccHHHHHHHHHHHh
Confidence 5677788889999999999887777777 99999999999999887654
No 222
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.79 E-value=9.3e-08 Score=102.60 Aligned_cols=181 Identities=11% Similarity=0.014 Sum_probs=115.4
Q ss_pred hhccCcchHHHHHHHHHHHhHHHHHHHhhhh----hhhccC-----CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q psy10432 221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP----VLEVLS-----PPLGLVFSCFMISIMIGSKIYSILILKYFKPETM 291 (440)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 291 (440)
.++++++++.+....++.....+........ .+.... ...++..+...+..++.+++.|+++|| +++|++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~ 84 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKL 84 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHH
Confidence 4566777777666665555443322111111 121111 345677778888899999999999998 999987
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH
Q psy10432 292 LTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT 371 (440)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 371 (440)
+........+........... .. .. ..++...+.+++.++..|...+++.+.+|++++++++|+.++..++|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~s-~~-----~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~ 157 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFHL-NS-VP-----LLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI 157 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hh-HH-----HHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence 644322222222111111111 11 11 345555566777888899999999999999999999999999999999
Q ss_pred HHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 372 CFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
.+||.+ + +.+.+ ..+++..|....+..+++.++....+
T Consensus 158 ~igp~l--~-g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 158 LLGTII--G-GLATI-SGNFVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHHHHH--H-HHHHh-ccccHHHHHHHHHHHHHHHHHHhhCC
Confidence 999994 4 66767 67888887554444444444444443
No 223
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.78 E-value=4.4e-08 Score=93.92 Aligned_cols=151 Identities=15% Similarity=0.065 Sum_probs=115.6
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-c---------cchhHHHHHHHHH
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-F---------SSDFYILLYGRLF 111 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-~---------~~~~~~l~~~r~l 111 (440)
+++|.++.++|..+..+.+...+.....+++.+|++.|+++.++.++.+++ .... . .++.+..+...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 578999999999877777777766689999999999999999999988886 3321 1 1344455666788
Q ss_pred HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cCchhhHHHHHHHH
Q psy10432 112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-----LGPIAPFAVAIPFL 186 (440)
Q Consensus 112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----w~~~~~~~~~~~~~ 186 (440)
.+++.+........++. +..|+++++...++.++..++|..+++.+++.+.+++| ++..+..+......
T Consensus 361 ~~~~~g~~~~~~~~~~~------~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~ 434 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLA------RLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLA 434 (468)
T ss_pred HHHHHHHHHccHHHHHH------HhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHH
Confidence 99998888666666666 99999999999999999999999999999999999887 54454444444333
Q ss_pred HHHHHHHHHhccc
Q psy10432 187 LGSTLFIYFCWEE 199 (440)
Q Consensus 187 ~~~~~~~~~~~~e 199 (440)
-+..+.....+|+
T Consensus 435 ~l~~l~~~~llP~ 447 (468)
T TIGR00788 435 PLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHhCCC
Confidence 3333333447786
No 224
>KOG3764|consensus
Probab=98.75 E-value=4.3e-08 Score=87.22 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=115.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.|++++...+.+++.+++.|.+.|| +|.+..+.+++..+..+.+++ .+... ++ ..++.=.+-+.+..
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilF-afg~s----y~-----~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILF-AFGNS----YP-----MLFVARSLQGVGSA 174 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHH-HHcch----hH-----HHHHHHHHhhhhHH
Confidence 789999999999999999999999997 999999999999988887666 32111 11 23333334445566
Q ss_pred chhhhHHhHhccCCcch-hhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 338 MYCPVTGYLRGRIIPEK-ARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~-~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
.......+++.+.+|+| +|++++|+.-....+|..++|. .+ |.+.+ ..|++..|.++++++++...+.+..-+
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPp--fG-GilYe-~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPP--FG-GILYE-FAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCC--cc-cchHh-hcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 66777788888888877 5799999999999999999999 57 88888 899999999999999988887776654
No 225
>KOG2504|consensus
Probab=98.75 E-value=9.6e-08 Score=91.50 Aligned_cols=153 Identities=20% Similarity=0.142 Sum_probs=123.1
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc--hhHHHHHHhHHHHHh-hhhcccchhHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG--RKLICISYGIVYTLC-CLTKFSSDFYILLY 107 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~-~~~~~~~~~~~l~~ 107 (440)
......++++..++.|.+..+.+.+.++-.....+..+..|+++|+.. ++.+..++.+..+++ ..+.+.++++.++.
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~ 393 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIV 393 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 333444566666899999999988888888888888899999999988 444556677777777 68899999999999
Q ss_pred HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHH
Q psy10432 108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFL 186 (440)
Q Consensus 108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~ 186 (440)
.-.+.|++.|.......-.+. |..+.++...+.|+.....+++.++||+++|.+.+..| | ...|+......
T Consensus 394 ~~~~fG~~~g~~~~l~~~i~~------~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y--~~~f~~~g~~~ 465 (509)
T KOG2504|consen 394 FSILFGFCVGSFSSLTPVILV------DLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY--DHAFYFCGLCF 465 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe--eeehhhcChHH
Confidence 999999999998554333444 99999999999999999999999999999999988876 6 66666666655
Q ss_pred HHHHH
Q psy10432 187 LGSTL 191 (440)
Q Consensus 187 ~~~~~ 191 (440)
++...
T Consensus 466 ~~s~~ 470 (509)
T KOG2504|consen 466 LLSAV 470 (509)
T ss_pred HHHHH
Confidence 54443
No 226
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.74 E-value=1.3e-07 Score=93.82 Aligned_cols=153 Identities=15% Similarity=0.141 Sum_probs=106.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc---c-------------------
Q psy10432 257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL---F------------------- 314 (440)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------- 314 (440)
..+.|++.+.+.++..++.++.+++.|| .+|++.+.++.++.+++.++. .+.... .
T Consensus 67 s~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~lg~ll~-alphf~~~~y~~~~~~~~~~~~~~~~~~~ 144 (633)
T TIGR00805 67 TSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMGLGSFLL-SLPHFLSGRYSYSTTVSSTGNLSSANSFL 144 (633)
T ss_pred CCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHHHHHHHH-hChHHhcCCcccccccccccccccccccc
Confidence 3788999999999999999999999997 999999999988888887665 332100 0
Q ss_pred ---c-----------------chhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHH
Q psy10432 315 ---D-----------------SRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFT 374 (440)
Q Consensus 315 ---~-----------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~ 374 (440)
. ..........+++-.+.+++.+...+...+++.|.+|+++|+...|+.+....+|..++
T Consensus 145 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG 224 (633)
T TIGR00805 145 CMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFG 224 (633)
T ss_pred ccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHH
Confidence 0 00000011233444566666777888899999999999999999999999999999988
Q ss_pred HHHhhccccccCc--------------------cc-hhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 375 LIFIKNEDAEGGK--------------------LI-AIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 375 ~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.+. +.+.+. +. .|+..|++.+++.++..+..+.+++
T Consensus 225 ~llg---g~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 225 YLLG---SFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHH---HHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 8732 222210 11 2566777777766665554444443
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.74 E-value=3.6e-07 Score=86.59 Aligned_cols=170 Identities=11% Similarity=0.084 Sum_probs=108.6
Q ss_pred hHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhh---ccCCchhHHHH-HHHHHHHHHHHHHhhhc
Q psy10432 240 GIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILK---YFKPETMLTLT-VYLATFSITVSTVLTSS 312 (440)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 312 (440)
.+........+|+++..+ ...+.++....+..++..++.|+++|| |+|||+..... .....++...+ .+...
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll-~~~~~ 96 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI-GFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH-HhCch
Confidence 333333344555554444 777888888899999999999999994 49999987765 44444443333 22111
Q ss_pred cc---------cchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhh--HHHHHHhhhhhhhHHHHHHHHhhcc
Q psy10432 313 LF---------DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKAR--ATITNWLRVPTNFITCFTLIFIKNE 381 (440)
Q Consensus 313 ~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g~~~~~~~~~~~ 381 (440)
.. ..... .....+.++.+..++.+...+...+++.|.+|+++| +.+.++.+...++|+.+++.+ +
T Consensus 97 ~~~~~~~~~~~~~~~~-~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~--g- 172 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPR-AIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA--G- 172 (477)
T ss_pred hhhhccccccccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH--H-
Confidence 00 00000 001234444455567777778889999999998865 678999999999999999872 2
Q ss_pred ccc--cC------------ccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 382 DAE--GG------------KLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 382 ~~~--~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.. .+ ...+++..|.+.+++.+++.++....-+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 173 AYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 211 00 0126788999988888887776655433
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.73 E-value=7.2e-08 Score=92.43 Aligned_cols=125 Identities=10% Similarity=0.060 Sum_probs=92.0
Q ss_pred hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--chhHHHHHHHHHHHHHHhhh
Q psy10432 43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SDFYILLYGRLFGGIATSIL 119 (440)
Q Consensus 43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~~~~l~~~r~l~G~~~~~~ 119 (440)
+.+|.++...++..........+..++++++.||+|+|+.+..+.++..++ ....+. ++++.+++..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 346655444333333223334445579999999999999999998888777 443343 35677777788999999998
Q ss_pred ccccchhhhccccccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 120 FSGFESWYVNEHLNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
.+...+... |..|++ ++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus 337 ~~~~~al~~------~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 337 MTVMWALEA------DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHH------HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 776666666 776654 358889999999999999999999998877766
No 229
>PRK10133 L-fucose transporter; Provisional
Probab=98.71 E-value=6.2e-07 Score=85.44 Aligned_cols=112 Identities=16% Similarity=0.197 Sum_probs=87.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.++..+...++..++.+..|++.|| +|+|+.+..+..+..++.+.. ......+ .+. ..+....+.+++.|
T Consensus 61 ~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~l~-~~~~~a~-~~~-----~ll~~r~l~G~g~g 132 (438)
T PRK10133 61 FQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYALGAALF-WPAAEIM-NYT-----LFLVGLFIIAAGLG 132 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHHHhcC-CHH-----HHHHHHHHHHHHHH
Confidence 788999999999999999999999998 999999999998888877554 2111111 121 34555566777788
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIF 377 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 377 (440)
...+..+.++.+..|+++++..++..+....+|..+++.+
T Consensus 133 ~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888887666666678899999999999998873
No 230
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.70 E-value=4.1e-07 Score=87.66 Aligned_cols=175 Identities=11% Similarity=0.128 Sum_probs=110.4
Q ss_pred hccCcchHHHHHHHHHHHhHHHHHHH----hhhhhhhccC--CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q psy10432 222 LFTNPCLLTLGIVQSIYEGIMYTFIF----VWTPVLEVLS--PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLT 295 (440)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~ 295 (440)
..++++++.......+.....+.... ..+.+....| ....++.....++..++.++.|+++|. +|||..+..+
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g 114 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIG 114 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHH
Confidence 34566666654444443333322221 1222223333 667788888889999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432 296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL 375 (440)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 375 (440)
.++..++.+.. . ...+....+.+..+.+++.|... .....++|..|.+.|....++.....-.....++
T Consensus 115 ~~l~vvG~Iv~-a---------tA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~ 183 (599)
T PF06609_consen 115 SLLGVVGSIVC-A---------TAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISP 183 (599)
T ss_pred HHHHHhHHHHh-h---------cCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccH
Confidence 99988888666 2 11111135556666666665544 3455678999999998877766554444444455
Q ss_pred HHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 376 IFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
.. + ..... ..+|++.|++..+...++.+.....
T Consensus 184 ~i--a-~~~~~-~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 184 LI--A-QLFAA-HSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HH--H-HHhcc-CCCcchHHHHHHHHHHHHHHHHHHH
Confidence 52 2 22333 5588999999888776666554443
No 231
>KOG3810|consensus
Probab=98.70 E-value=8.5e-07 Score=77.49 Aligned_cols=352 Identities=11% Similarity=0.072 Sum_probs=214.3
Q ss_pred hhcCCChhhHHH----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHh
Q psy10432 43 KDYGYDEKNIAL----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATS 117 (440)
Q Consensus 43 ~~~g~s~~~~~~----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~ 117 (440)
.+.+++..++.- +..-.+++..+ +.=.+.|-.-.|++++.-.+..... .+.-+.++.+.+=+.-+..|...+
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~Lv---pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA 110 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLV---PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA 110 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHH---HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH
Confidence 455667666652 33444555554 4556789888888887755555555 677788889888888888888877
Q ss_pred hhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhc
Q psy10432 118 ILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCW 197 (440)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 197 (440)
.. - +..+++-..++++++.++.+.-.+..-.|...|..++..+.+.-.+.+...=.+......+... ...++
T Consensus 111 aE-I------AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~-~A~fL 182 (433)
T KOG3810|consen 111 AE-I------AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVL-LALFL 182 (433)
T ss_pred HH-H------hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHH-HHhhC
Confidence 75 3 3444445999999999999999999999999999999998876444334333444433333333 33455
Q ss_pred cccCCC------CCcc--------C-CCCc--------cchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh
Q psy10432 198 EEHYDP------KTAK--------S-SLLP--------NSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE 254 (440)
Q Consensus 198 ~e~~~~------~~~~--------~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (440)
|..+++ +++. . +.+. ....+.++...+||+++...+-..+...+.+-..++.+...+
T Consensus 183 P~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~ 262 (433)
T KOG3810|consen 183 PRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWK 262 (433)
T ss_pred CCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHH
Confidence 654421 0000 0 0000 011234455678899888777777777777666554443332
Q ss_pred cc-C----CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHH
Q psy10432 255 VL-S----PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAF 329 (440)
Q Consensus 255 ~~-~----~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (440)
.- + ...|..-+...+.++++.+..|.+.-+ +.|..-+.++......+.+++ +.......| ....++
T Consensus 263 ~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~-w~r~g~~ll~~~s~~~agllf--~m~~t~~Iw------~~Ya~y 333 (433)
T KOG3810|consen 263 EVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNIN-WNRWGDLLLAVGSAVQAGLLF--IMAQTQHIW------VCYAGY 333 (433)
T ss_pred hhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeec-cchhhHHHHHHHHHHhhhhhh--hhhccccee------hhhhhH
Confidence 22 1 345666677777788888888988654 444433333333222222222 222222222 467777
Q ss_pred HHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhc-cccccCc---cchhhHHHHHHHHHHHHH
Q psy10432 330 LIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKN-EDAEGGK---LIAIHSVFVVCTACLLVA 405 (440)
Q Consensus 330 ~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~ 405 (440)
.++.....+..+....-+.+....|.-|..+|+..++.-+-..+-..++.. .|.-.+. ..-|..-|.+.+++.++.
T Consensus 334 vlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~ 413 (433)
T KOG3810|consen 334 VLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIG 413 (433)
T ss_pred HHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHH
Confidence 777777888777777777777788999999998888766665555543211 0111110 122455677777777776
Q ss_pred HHHHHHhhh
Q psy10432 406 LLASCVFKR 414 (440)
Q Consensus 406 ~~~~~~~~~ 414 (440)
..+.....+
T Consensus 414 ~~~~~~~~~ 422 (433)
T KOG3810|consen 414 FGIEYLMCR 422 (433)
T ss_pred HHHHHHHhh
Confidence 655444433
No 232
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.68 E-value=3.6e-07 Score=87.07 Aligned_cols=145 Identities=15% Similarity=0.206 Sum_probs=106.7
Q ss_pred HHHHHHHHHHhhhhhHhhhHh-hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-
Q psy10432 23 PFFLATFSDWIQGPYVYKVYK-DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS- 99 (440)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~- 99 (440)
..+....+..+.....+...+ .+|.+ ...+....+..+.+.+..|++++++||+|+|+.+..+..+.+++ ++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 333333444344444423333 34434 45556666666666666789999999999999999999999988 555555
Q ss_pred -chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10432 100 -SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADIL 171 (440)
Q Consensus 100 -~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 171 (440)
+|.+.+++.-++.|++.+.......+.+. |..+.+ +.|..++..+....++..+++.+.+.+.+..
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~a------d~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLA------DVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccc------cchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999776666665 877643 3578889999999999999999999988877
Q ss_pred ccC
Q psy10432 172 NLG 174 (440)
Q Consensus 172 gw~ 174 (440)
|+.
T Consensus 386 Gy~ 388 (428)
T PF13347_consen 386 GYD 388 (428)
T ss_pred CcC
Confidence 663
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.66 E-value=9.9e-06 Score=80.08 Aligned_cols=145 Identities=14% Similarity=0.143 Sum_probs=110.7
Q ss_pred hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccc--------hhHHHHHHHH
Q psy10432 41 VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSS--------DFYILLYGRL 110 (440)
Q Consensus 41 ~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~--------~~~~l~~~r~ 110 (440)
+.+.+|.+.+....++........+...++|.++|+ +||++.+..+.++..++ .+.++.. .....+++-.
T Consensus 14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa 93 (654)
T TIGR00926 14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA 93 (654)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH
Confidence 346688888887777777777777777899999995 79999999999988888 5444321 1233567788
Q ss_pred HHHHHHhhhccccchhhhccccccccccch---hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCchhhHH
Q psy10432 111 FGGIATSILFSGFESWYVNEHLNYYLFPVE---WLNLTFARATFGSGLFAIVSGFTAHFFADIL-------NLGPIAPFA 180 (440)
Q Consensus 111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~~~~~ 180 (440)
+..+|.|..-|+..+... |.++++ +|.+.+.++..+.++|+++++.+..++.+.. +| ...|.
T Consensus 94 Lia~G~GgiKp~vsaf~g------dqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~--~~aF~ 165 (654)
T TIGR00926 94 LIALGTGGIKPCVSAFGG------DQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY--PLAFG 165 (654)
T ss_pred HHHhhccccccCchhhhH------hhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch--HHHHH
Confidence 888999999998888888 777654 4677889999999999999999999887543 46 77777
Q ss_pred HHHHHHHHHHHHH
Q psy10432 181 VAIPFLLGSTLFI 193 (440)
Q Consensus 181 ~~~~~~~~~~~~~ 193 (440)
+..+..++..+..
T Consensus 166 i~~i~m~ia~lvf 178 (654)
T TIGR00926 166 VPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666555443
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.66 E-value=5.2e-07 Score=79.70 Aligned_cols=171 Identities=12% Similarity=0.079 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHH--HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHH
Q psy10432 13 FKRLQVRYFIPFFLATFS--DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIV 89 (440)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~ 89 (440)
.|+.+..|.+..+...-+ .......+|+++.|.|+|+.+.|++.++..+.+...+...-.+++|. ++|+..+....+
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 344444555544433332 44456678899999999999999877777777777777888888865 466666667777
Q ss_pred HHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 90 YTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFF 167 (440)
Q Consensus 90 ~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (440)
+.++ +.+.+.+.-..++- -++.|+|.|..+|.....+. +..+ +++-++..++.+....+=...||.+.|++
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~------~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLIL------LRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHH------hhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 7777 55545554333332 49999999999887777776 5443 44556667777777777788999999999
Q ss_pred Hhhc-ccCchhhHHHHHHHHHHHHHH
Q psy10432 168 ADIL-NLGPIAPFAVAIPFLLGSTLF 192 (440)
Q Consensus 168 ~~~~-gw~~~~~~~~~~~~~~~~~~~ 192 (440)
.|.. +| +..........+...+.
T Consensus 357 hDa~gsw--~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 357 HDATGSW--SAPLVLLALATLLMLIF 380 (395)
T ss_pred HHhcCCh--HHHHHHHHHHHHHHHHH
Confidence 9986 46 65555544444433333
No 235
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.64 E-value=2.6e-06 Score=79.22 Aligned_cols=143 Identities=8% Similarity=0.040 Sum_probs=106.1
Q ss_pred Cc-hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 258 PP-LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 258 ~~-~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
.+ .|.++..+..+..+..+..|++.|| +|.|+.+..+.+...+..+++.. ... . . ...+.=.+++++.
T Consensus 61 ~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~f-a~S----l-~----~L~i~R~llGvaE 129 (511)
T TIGR00806 61 ETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLL-GTS----V-W----HMQLMEVFYSVTM 129 (511)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHH-HHH----H-H----HHHHHHHHHHHHH
Confidence 66 8999999999999999999999998 99999999888887777665522 110 1 1 2333344556666
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
|... ....++.+.+|+++|+++.|..+....+|..+++.+... -...+ +..+.....+......++.++.+++++
T Consensus 130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7667 888889999999999999999999999999999985422 11123 445556666666666777777777664
No 236
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.63 E-value=1.4e-06 Score=78.83 Aligned_cols=150 Identities=19% Similarity=0.200 Sum_probs=107.4
Q ss_pred HHHHhhhhhHhhhHhhcCCCh--hhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc--hhH
Q psy10432 29 FSDWIQGPYVYKVYKDYGYDE--KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS--DFY 103 (440)
Q Consensus 29 ~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~--~~~ 103 (440)
.......+..+...++++.+. .+.++..........+..++.|.++||+|||+.+..+.....++ ....+.. +.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 333344555655666766555 35666555555555555579999999999998888877654444 4444444 488
Q ss_pred HHHHHHHHHHHHHhhhccccchhhhccccccccccc-hhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhh--cccCchhhH
Q psy10432 104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV-EWLNLTFARATF-GSGLFAIVSGFTAHFFADI--LNLGPIAPF 179 (440)
Q Consensus 104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~gw~~~~~~ 179 (440)
.+++.|+.+|++.+...+...+++. |..|+ ++|+...+.... ...+|..++|.+++.+... .+| +..+
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 167 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLS------EWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGW--RAAF 167 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHH------HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHH
Confidence 9999999999999988787777777 99887 789999999888 6888999999888777665 456 6655
Q ss_pred HHHHHHH
Q psy10432 180 AVAIPFL 186 (440)
Q Consensus 180 ~~~~~~~ 186 (440)
.......
T Consensus 168 ~~~~~~~ 174 (338)
T COG0477 168 LLAALLG 174 (338)
T ss_pred HHHHHHH
Confidence 4444433
No 237
>PRK09669 putative symporter YagG; Provisional
Probab=98.60 E-value=7.1e-07 Score=85.50 Aligned_cols=114 Identities=11% Similarity=0.158 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hhcc-cchhHHHHHHHHHHHHHHhhhccccchhhhcc
Q psy10432 54 LLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LTKF-SSDFYILLYGRLFGGIATSILFSGFESWYVNE 130 (440)
Q Consensus 54 ~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 130 (440)
.....+.+...+..+++++++||+|+|+.+..+..+..+. . +... .++.+.+++..++.|++.+...+...+++.
T Consensus 268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a-- 345 (444)
T PRK09669 268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS-- 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 3444444444444478999999999999998887766653 3 2222 457777888889999999998777666666
Q ss_pred ccccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 131 HLNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 131 ~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
|..+.+ +.|..++..+....+|..+|+.+++.+.+..|+
T Consensus 346 ----d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 346 ----DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred ----hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777532 235577888999999999999999999988877
No 238
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.58 E-value=9e-07 Score=81.75 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=127.9
Q ss_pred hccCcc-hHHHHHHHHHHHhHHHHHHHhhhhhh----h----ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH
Q psy10432 222 LFTNPC-LLTLGIVQSIYEGIMYTFIFVWTPVL----E----VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETML 292 (440)
Q Consensus 222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 292 (440)
.+++|+ ++.+...-+.=-+++|..-.....++ + .++.++.-.+..++.-.-+...++||++||.+|+|+.+
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 344444 34444444444455554433222222 1 22244444555555555567889999999978999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhH
Q psy10432 293 TLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFI 370 (440)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g 370 (440)
..+.++.+++.+.+ ...... ... ...+++.+...+.|..=|...+++.|..|++ +|-..+++..+..|+|
T Consensus 96 ~lGail~~iGh~~L-~~~~~~---~~~----gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiG 167 (498)
T COG3104 96 VLGAILMAIGHLVL-AISSVS---GPG----GLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIG 167 (498)
T ss_pred HHHHHHHHHHHHHH-hccccc---ccc----HHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehH
Confidence 99999999998777 332100 011 3566666666789999999999998888765 5677789999999999
Q ss_pred HHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 371 TCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.++|.+. +...+ ..++...|..+++.+..+.+.++..++
T Consensus 168 sl~~p~i~---~~~~~-~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 168 SLIAPIIT---GLLAI-NYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHH---HHHHH-hhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999955 77777 889999999999999999888887776
No 239
>KOG2532|consensus
Probab=98.54 E-value=1.2e-06 Score=83.02 Aligned_cols=145 Identities=19% Similarity=0.248 Sum_probs=113.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+-+++++....|.+++.+..|++.|| +|.|+++..+.++.++..++.-....... + ..++.=.+-+++.|
T Consensus 73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~~~~--~------~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 73 TEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAASIGF--Y------LLLVLRFLQGLGQG 143 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHhcc--h------hhHHHHHHhHHHHh
Confidence 678999999999999999999999998 99999999999888887766522211111 1 12333334556688
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
..+|....+..+..|+++|++..++.....++|..++-. .+ |.+-+...||+..|++.+++.++..++...+.+
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp--~s-g~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMP--VS-GLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHH--hH-HHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999888876 34 667773489999999998887776666554443
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.51 E-value=6.6e-06 Score=79.89 Aligned_cols=142 Identities=11% Similarity=0.001 Sum_probs=89.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
.+.+.+..... ......+..|++.|| +|+|+.+.++.+...++.+.. .+...... .+......+...+.+++.+
T Consensus 62 ~~l~~i~svg~-~~g~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~-ala~~~~i---~~s~~~l~l~r~l~G~G~~ 135 (591)
T PTZ00207 62 RDLSTITTVGI-AVGYFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLF-ALTFQEVI---EGSVVRLSVYNGLMTLGCM 135 (591)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHHhcccc---cCcHHHHHHHHHHHHHHHH
Confidence 44555554422 223456678999997 999999999999988888666 43211100 0111133444445555666
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
...+.......+.+| ++||++.|+......+|+.+.+.+.. +...+ +++..|++.++..++..++...
T Consensus 136 ~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~--~l~~~---~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 136 LFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQL--AFFSD---NTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---hHHHHHHHHHHHHHHHHHHHHh
Confidence 666666677788876 78999999999999999986554332 22222 3456666666655555444443
No 241
>KOG0253|consensus
Probab=98.49 E-value=4.1e-07 Score=80.21 Aligned_cols=126 Identities=15% Similarity=0.181 Sum_probs=85.8
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc--cchhH--HHHHHHHHHHHHHhhhccccchhhhc
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF--SSDFY--ILLYGRLFGGIATSILFSGFESWYVN 129 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~--~~~~~--~l~~~r~l~G~~~~~~~~~~~~~~~~ 129 (440)
+.++.-..+.+ +.+++.||+|||+.+..+.+++++. .+... .+|.. .+..+|++... .+.+.+.+..
T Consensus 389 itslaefPGlL---It~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~fqvaYvYtP- 460 (528)
T KOG0253|consen 389 ITSLAEFPGLL---ITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AFQVAYVYTP- 460 (528)
T ss_pred HHHHhhCCchh---HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hheEEEEecC-
Confidence 45555566666 9999999999999999999999887 43333 33332 23445554433 3333344556
Q ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcc
Q psy10432 130 EHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWE 198 (440)
Q Consensus 130 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (440)
|.+|..-|+...|.-+.+.-+|.++.|+++ ...+. +...+..+.....++..+... ++|
T Consensus 461 -----EVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~---s~sl~i~vy~~~~ilagIavc-ffP 519 (528)
T KOG0253|consen 461 -----EVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL---STSLPIFVYGALFILAGIAVC-FFP 519 (528)
T ss_pred -----cccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc---ceeehHHHHHHHHHHHHHHhe-eee
Confidence 999999999999999999999999999999 33333 223455555555555555444 345
No 242
>KOG2615|consensus
Probab=98.46 E-value=1.2e-06 Score=77.68 Aligned_cols=111 Identities=16% Similarity=0.134 Sum_probs=85.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
...|++-+.+.+...+.++..|.++|| +|||.++..+....++..+.. .. . ..+..+.+..+..|
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~-~~-------S------~~F~afv~aR~l~G 132 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLW-AL-------S------RNFAAFVLARFLGG 132 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHH-HH-------H------HHHHHHHHHHHhhh
Confidence 567888899999999999999999997 999999999998888865444 21 0 11222222234445
Q ss_pred c---hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432 338 M---YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG 386 (440)
Q Consensus 338 ~---~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 386 (440)
+ ......++++|.+++|+|+.+++..+...++|..+||. .+ +++..
T Consensus 133 i~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPm--IG-gyla~ 181 (451)
T KOG2615|consen 133 IFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPM--IG-GYLAQ 181 (451)
T ss_pred hccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcch--hh-hHHHh
Confidence 5 34577899999999999999999999999999999999 45 54443
No 243
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.43 E-value=2e-06 Score=83.01 Aligned_cols=120 Identities=8% Similarity=0.072 Sum_probs=86.8
Q ss_pred ChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-----ccchhHHHHHHHHHHHHHHhhhcc
Q psy10432 48 DEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-----FSSDFYILLYGRLFGGIATSILFS 121 (440)
Q Consensus 48 s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~ 121 (440)
+.+..+.+..+..+...+..+++++++||+|+|+.+..+..+..++ .... ..++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4455555554444555555579999999999999998887766655 3221 234566777777888999888866
Q ss_pred ccchhhhccccccccccc-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 122 GFESWYVNEHLNYYLFPV-------EWLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
...+++. |..|. ++.|..++......-+|..+|+.+.|++.+..|+
T Consensus 344 ~~~am~a------d~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 344 LQVIMVA------DTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHh------hhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6555566 77652 2345588999999999999999999999887766
No 244
>KOG3762|consensus
Probab=98.32 E-value=1.3e-06 Score=80.90 Aligned_cols=152 Identities=11% Similarity=0.058 Sum_probs=115.6
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR 109 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r 109 (440)
.+....++.--.+|.+..+...|..-.+....-.++-++.+++.+|+|+-+++..++.+..+= +.....+|.|+.+...
T Consensus 387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPie 466 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIE 466 (618)
T ss_pred HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHH
Confidence 444445554444888866666664333333333333368899999999999999999888886 6788999999999999
Q ss_pred HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432 110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188 (440)
Q Consensus 110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~ 188 (440)
+++|+..+..+.+..+++. +..||+-|..+.++.+ ...++|--+|.++||.+.+.+|- |..|...++.+++
T Consensus 467 ilqgit~aliWaa~~sY~s------~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~--~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 467 ILQGITHALIWAAIISYAS------HVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA--RTTFRIFGIACLV 538 (618)
T ss_pred HHHHHHHHHHHHHHHHHHH------hhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh--HHHHHHHHHHHHH
Confidence 9999999999665555555 9999999999999984 55789999999999999999887 7777666555444
Q ss_pred HH
Q psy10432 189 ST 190 (440)
Q Consensus 189 ~~ 190 (440)
..
T Consensus 539 ~l 540 (618)
T KOG3762|consen 539 TL 540 (618)
T ss_pred HH
Confidence 33
No 245
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.32 E-value=1.4e-06 Score=59.87 Aligned_cols=67 Identities=18% Similarity=0.231 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHH
Q psy10432 24 FFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVY 90 (440)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~ 90 (440)
++..+.+.+...|+++...++.|.|+.++|.+..+......+..|++|.++||+++++..+....+.
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444444455889997777999999999999999999999999999999999999988877665543
No 246
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.27 E-value=2e-05 Score=62.49 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=81.7
Q ss_pred hhhhccccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhh
Q psy10432 64 MIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLN 143 (440)
Q Consensus 64 ~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 143 (440)
.+..++.+.+.+++|.|+.+++|.+.+.+-....+-++.+.++.+-++.|++.+....+-..++. +..++++|+
T Consensus 51 ~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt------~~s~~~~~~ 124 (156)
T PF05978_consen 51 AISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT------SYSTEETIG 124 (156)
T ss_pred HHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH------HcCCHHHHh
Confidence 33334777889999999999999999998755567788899999999999999999665555555 888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 144 LTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 144 ~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
+-.++.......+.++|..+.-.+.
T Consensus 125 ~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 125 RNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888887765543
No 247
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.26 E-value=3.2e-05 Score=69.72 Aligned_cols=117 Identities=15% Similarity=0.067 Sum_probs=93.3
Q ss_pred hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432 254 EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE 333 (440)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (440)
+....+++++......+..+.++..+++.+| ++.|+-+..++.+.++++.++.-..... .+. ..+.++.+.+
T Consensus 44 ~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa~~~--~y~-----~FL~~lFila 115 (422)
T COG0738 44 DLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAASSK--SYG-----FFLVALFILA 115 (422)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhhhhh--hHH-----HHHHHHHHHH
Confidence 4444888999999999999999999999997 9999999999999999887662111111 121 3455555666
Q ss_pred HhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 334 ISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
.+.|......+.++....|++...+-+++.+....+|..++|.+.
T Consensus 116 ~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 116 SGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred hhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 677778888899999998988888999999999999999999843
No 248
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.20 E-value=6.5e-05 Score=68.28 Aligned_cols=144 Identities=15% Similarity=0.201 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHH---HHHHHHHHHhhhhcccccccc-ccchhHHHHHHhHHHHH
Q psy10432 18 VRYFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIAD-KFGRKLICISYGIVYTL 92 (440)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~D-r~Grr~~l~~~~~~~~~ 92 (440)
++++...++..++-++.-..+.|.- +-||.+..+... ....+.+++.. ..|++.. |.++|+.-..++....+
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~---~~g~~l~~~~~~~~~a~~G~~~~~~ 287 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGML---LAGFLLSRRLGKKRTAALGCLLGAL 287 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCCchHHHHHHHHHHHH
Confidence 4455555666666555555665555 668888776654 67777777776 6666666 77888887788877777
Q ss_pred h-h---hhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 93 C-C---LTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 93 ~-~---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
+ . ..+...+.+.+...-++.|++.|.+.....+.+. |..++++.|..+|.+.....++..+|..++|.+.
T Consensus 288 ~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM------~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 288 AFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMM------DLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHH------hCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 3 3556678899999999999999999888888888 9999999999999999999999999999999987
Q ss_pred hh
Q psy10432 169 DI 170 (440)
Q Consensus 169 ~~ 170 (440)
|.
T Consensus 362 D~ 363 (403)
T PF03209_consen 362 DL 363 (403)
T ss_pred HH
Confidence 65
No 249
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.19 E-value=0.0067 Score=57.96 Aligned_cols=170 Identities=18% Similarity=0.152 Sum_probs=101.8
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---------hcccCchhhHHHHHH-HHHHHHHHHHHhcccc--
Q psy10432 133 NYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD---------ILNLGPIAPFAVAIP-FLLGSTLFIYFCWEEH-- 200 (440)
Q Consensus 133 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~gw~~~~~~~~~~~-~~~~~~~~~~~~~~e~-- 200 (440)
..|.++.+|-.|..++...+.++|.++++.+...+.+ .-.|+...-...... ...+........+.+.
T Consensus 169 AN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl 248 (491)
T PF03219_consen 169 ANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVL 248 (491)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3499999999999999999999999999998888887 112411111111111 1111112222222211
Q ss_pred --CC----CCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC------CchhhHHHHH
Q psy10432 201 --YD----PKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS------PPLGLVFSCF 267 (440)
Q Consensus 201 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~g~~~~~~ 267 (440)
+. ..+++++..+.+..++++.++++|.+..+.+............-..|-... +.+. ...|-.....
T Consensus 249 ~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~t 328 (491)
T PF03219_consen 249 TDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWT 328 (491)
T ss_pred CccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 11 111222224456778999999999888877777666666554444444444 2222 3345555666
Q ss_pred HHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432 268 MISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI 303 (440)
Q Consensus 268 ~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 303 (440)
++..++..++.+++.+| +|-+....+.-+...+..
T Consensus 329 Givtii~~~l~~~iir~-~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 329 GIVTIIMMFLSSNIIRR-FGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHH-hhHHHHHHHhHHHHHHHH
Confidence 66667777888999997 888777666544444433
No 250
>KOG0254|consensus
Probab=98.16 E-value=2.7e-05 Score=75.94 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchh
Q psy10432 261 GLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYC 340 (440)
Q Consensus 261 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (440)
+++.+...++..+++++.|+++|+ +|||+.+..+.+...++.+.. .... +......+=.+.+++.|...
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~-~~a~---------~~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIII-ALAP---------SWYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHH-HHhh---------hHHHHHHHHHHhccchhhhh
Confidence 799999999999999999999997 999999999999888887666 3221 11135666667777888888
Q ss_pred hhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc-chhhHHHHHHHHHHHHHHHHHHH
Q psy10432 341 PVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL-IAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 341 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
.....+.+|..|++.||...+..+....+|..++.. . +...+.. .+|+..+.+..+..++..+..+.
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~--~--~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~ 228 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYC--I--NYGTSKVYAGWRIPLGLALIPAVILALGMLF 228 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHH--H--hhhhccCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999999988888843 2 2333211 47887777776666665555333
No 251
>PRK11462 putative transporter; Provisional
Probab=98.14 E-value=4.5e-05 Score=73.23 Aligned_cols=116 Identities=9% Similarity=-0.041 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-c-hhHHHHHHHHHHHHHHhhhccccchhhh
Q psy10432 52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-S-DFYILLYGRLFGGIATSILFSGFESWYV 128 (440)
Q Consensus 52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 128 (440)
.+.+.....+.+.+..+++++++||+|+|+.+..+..+..+. .+..+. . +...+++.-++.|++.+...+...+++.
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444444469999999999999877555544443 322222 2 2333444556677777665443344444
Q ss_pred cccccccccc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 129 NEHLNYYLFP-------VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 129 ~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
|..+ +++.+..++.......+|..+|+.+++.+.+..|+
T Consensus 345 ------d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 345 ------DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred ------HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5554 22234456777788999999999999998877666
No 252
>KOG2533|consensus
Probab=98.10 E-value=3.8e-05 Score=73.23 Aligned_cols=141 Identities=13% Similarity=0.080 Sum_probs=102.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
+.+.+...+.+.++.+++.+..+.+.|| ++..+.+....+...+..++... .. .. +..+..=.+.++..
T Consensus 80 ~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~----~~--s~----~~~ialr~llGl~e 148 (495)
T KOG2533|consen 80 GNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAA----VH--SF----PGLIALRFLLGLFE 148 (495)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHH----Hh--hh----HHHHHHHHHHHHHh
Confidence 4788999999999999999999999998 88555544444333332222211 00 11 12334444566678
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccc-----cCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAE-----GGKLIAIHSVFVVCTACLLVALLASCV 411 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (440)
+..+|....++.....+++||..+|+.....++|+++|+.+.. +.. .. ..||++.|++.+++.+...++.++
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~--g~~~~~~~~~-~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAY--GVFKLNGSGG-LAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHH--HhhhhcCCCC-cCCceeehhHHHHHHHHHHheEEE
Confidence 8899999999999999999999999999999999999998542 311 23 678999999999887776655443
No 253
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.10 E-value=0.00073 Score=62.90 Aligned_cols=329 Identities=12% Similarity=-0.004 Sum_probs=158.5
Q ss_pred hHhhhHhh--cCCChhhHHHH--HHHHHHHHhhhhcccccccc-----ccchhHHHHH------HhHHHHHh-hhh----
Q psy10432 37 YVYKVYKD--YGYDEKNIALL--YIAGFASSMIFGIVVGSIAD-----KFGRKLICIS------YGIVYTLC-CLT---- 96 (440)
Q Consensus 37 ~~~~~~~~--~g~s~~~~~~~--~~~~~~~~~l~~~~~G~l~D-----r~Grr~~l~~------~~~~~~~~-~~~---- 96 (440)
-+|-+.++ -+.|.+|.+.. .+..+..-. +|.++.| |+||||..++ |..+..++ ...
T Consensus 22 siPflL~~~~~~~sy~q~~~fSla~~PfSlKl----LWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~ 97 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAIFSLASYPFSLKL----LWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLL 97 (544)
T ss_pred cchhhhccccCCCChhHheeeeeeechhHHHH----hhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhc
Confidence 35455566 67888888762 222333333 5666666 8999998554 33333333 120
Q ss_pred ------cc-------cchh--HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHH
Q psy10432 97 ------KF-------SSDF--YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSG 161 (440)
Q Consensus 97 ------~~-------~~~~--~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (440)
.. .++. ..+...-++.=+-.+...-+.+.|.. ....+++++.+..-...+.++|..++-
T Consensus 98 ~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWAL------T~Ls~~n~~~ASTcqtvG~~~Gyfls~ 171 (544)
T PF13000_consen 98 FDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWAL------TMLSPENVGYASTCQTVGQTAGYFLSF 171 (544)
T ss_pred ccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhh------hhcChhhcchHHHHHHhHhhhhHHHHH
Confidence 00 0011 12233333444445566666677777 888899999888888888888887776
Q ss_pred HHHHHHHh------hc-------ccCc-hhhHHHHHHHHHHHHHHHHHhccccCCCCC----------c--cC-------
Q psy10432 162 FTAHFFAD------IL-------NLGP-IAPFAVAIPFLLGSTLFIYFCWEEHYDPKT----------A--KS------- 208 (440)
Q Consensus 162 ~~~~~l~~------~~-------gw~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----------~--~~------- 208 (440)
.+--.+.+ ++ |.-. ......-+.+.++..+++.++-+|++..+. + ++
T Consensus 172 tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (544)
T PF13000_consen 172 TVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYD 251 (544)
T ss_pred HHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecc
Confidence 55444321 10 1100 001112222233334444444455432110 0 00
Q ss_pred CCC------ccchhh---hhhhhccCcchHHHHHHHHHHHhHHHHHHHhh-hhhh--hccCCchhhHHHHHHHHHHHHHH
Q psy10432 209 SLL------PNSMFS---SLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW-TPVL--EVLSPPLGLVFSCFMISIMIGSK 276 (440)
Q Consensus 209 ~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~g~~~~~~~~~~~~~~~ 276 (440)
+.+ ..+.++ ....++|.|.+..+.+.....-.++...-... ...+ +...++.++...+..-..++...
T Consensus 252 ~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~ 331 (544)
T PF13000_consen 252 ESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPY 331 (544)
T ss_pred cccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHH
Confidence 000 011222 23345677777776666555554443221111 1111 12224555444444444555555
Q ss_pred HHHHHHhhccCCc---------------------------hhHHHHHHHHHHHHHHH-HHhhhcc-ccchhhcchhHHHH
Q psy10432 277 IYSILILKYFKPE---------------------------TMLTLTVYLATFSITVS-TVLTSSL-FDSRRVLSTNLCFV 327 (440)
Q Consensus 277 ~~g~l~~r~~~~~---------------------------~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 327 (440)
..++++.. ..+. +....++..-.+..+.. ......+ +...........+.
T Consensus 332 ~~~Kws~g-~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~ 410 (544)
T PF13000_consen 332 YIGKWSAG-SPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVII 410 (544)
T ss_pred HhhhhhcC-CCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHH
Confidence 55555532 2210 11122222222221111 0111112 11111101112233
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
...+..+.....+....+.-+++.++..-|+.+.+.|+..|+|+---..
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~ 459 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRT 459 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHH
Confidence 3334445555566677788889999999999999999999999755443
No 254
>KOG0255|consensus
Probab=98.05 E-value=4.8e-05 Score=74.55 Aligned_cols=135 Identities=13% Similarity=0.006 Sum_probs=98.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
....+..+...+|.++|+++.|.++|| +|||+.+..+..+..++.+.. .+ .++.....+.=.+.+++.+
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~-a~---------a~~~~~~~~~Rfl~G~~~~ 186 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILT-AF---------APNYWMFLIFRFLSGFFGS 186 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHH-HH---------hCcHHHHHHHHHHHHhhcc
Confidence 556677888899999999999999998 999999999998888877544 21 1111123343344555566
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (440)
........+..|.+++++|+.+..+ ......++.+++... +.+.. +|++.+++..+..+...+..+
T Consensus 187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~---a~~~~---~Wr~~~~~~~~~~~~~~~~~~ 252 (521)
T KOG0255|consen 187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA---AYITR---DWRWLFWIISIPSGLFLLLWF 252 (521)
T ss_pred chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH---HHHHh---hHHHHHHHHHHHHHHHHHHHH
Confidence 6777888899999999999999999 767777777777633 33333 678888888777776655533
No 255
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.00013 Score=68.19 Aligned_cols=112 Identities=13% Similarity=0.186 Sum_probs=86.1
Q ss_pred HHHHHHHHhhh-hccccccccccchhHHHHHHhHHHHHh-hhhccc--chhHHHHHHHHHHHHHHhhhccccchhhhccc
Q psy10432 56 YIAGFASSMIF-GIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SDFYILLYGRLFGGIATSILFSGFESWYVNEH 131 (440)
Q Consensus 56 ~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 131 (440)
.........+. .+++.++++|+|+|+++..+.++..++ ++..+. ++.+..++..++.+++.+...+...++++
T Consensus 277 ~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~--- 353 (467)
T COG2211 277 LLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVA--- 353 (467)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhc---
Confidence 33333344444 379999999999999999999999998 554444 47888899999999999998776666666
Q ss_pred cccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 132 LNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 132 ~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
|..+-+ +-|...+......=+|..++..+.++..+..|+
T Consensus 354 ---d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 354 ---DTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred ---chhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 665533 235677888888889999999999998888776
No 256
>KOG2325|consensus
Probab=97.94 E-value=0.00022 Score=66.96 Aligned_cols=150 Identities=15% Similarity=0.048 Sum_probs=95.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCC-chhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKP-ETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (440)
...|++.+...++..++++..|++..| .+. |+.+..+.+.++++.++.+.+...++. +.. ..+.+-.+.+++.
T Consensus 71 ~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~-~~y----~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 71 TFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLIVSFLIAIIGNLLYLALAYVPNG-VKY----LMLVARILTGVGV 144 (488)
T ss_pred chhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHHHHHHHHHHHHHHHHHHHhcccc-hHH----HHHHHHHHcCcCc
Confidence 678999999999999999999999997 554 777888888888887666344333331 222 3444444433333
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCc---------cchhhHHHHHHHHHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGK---------LIAIHSVFVVCTACLLVALL 407 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 407 (440)
|. ......++++..-.++|.++++.......+|..+||.+-..++.+.+. ...|..+-++++++.++..+
T Consensus 145 ~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 145 GN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred cc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 33 335566777766678888888888887788888888643221212110 22355666666666666555
Q ss_pred HHH-Hhhh
Q psy10432 408 ASC-VFKR 414 (440)
Q Consensus 408 ~~~-~~~~ 414 (440)
+.. .+++
T Consensus 224 ~i~~~f~E 231 (488)
T KOG2325|consen 224 IILFFFKE 231 (488)
T ss_pred HHHhheee
Confidence 544 4444
No 257
>KOG0252|consensus
Probab=97.93 E-value=9e-05 Score=67.87 Aligned_cols=114 Identities=14% Similarity=0.108 Sum_probs=82.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
...+.+.....++.++|+++.|++.|| +|||++.-..++++.++.++. ......+.+... ...+...=.+.+++.|
T Consensus 84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~-~~s~~~~~~~~~--m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 84 GVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALS-GLSVGTTSPLGV--MMTLCFFRFLLGIGIG 159 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHh-ccCCCCCCCcch--hhHHHHHHHHhhcccc
Confidence 456778888889999999999999997 999999988888888887644 333222222111 0012222225566777
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL 375 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 375 (440)
.-+|...+..+|....+.||+..+..-..++.|...|.
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 79999999999999999999988887777777655554
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.81 E-value=0.00039 Score=59.91 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=82.3
Q ss_pred HHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432 238 YEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL 313 (440)
Q Consensus 238 ~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (440)
..+..|.+- .+.|.+ +..+ .+...+-....++..+ ++..|.+.|+ .+++..+.++.....++...+ +.....
T Consensus 14 ~~Gt~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~-~l~~~~ 89 (250)
T PF06813_consen 14 CSGTTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDR-FGPWVVLLIGAVLGFVGYGLL-WLAVSG 89 (250)
T ss_pred hcCcccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH-HHHHhC
Confidence 334445453 355655 3333 5566666666777766 4888999997 999999999999999988776 443222
Q ss_pred ccc--hhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 314 FDS--RRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 314 ~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
... ..+ ......++.+.+.+...........+++| ++||++.|+.-....+++.+-..+.
T Consensus 90 ~i~~~~~~----~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 90 RIPSLPVW----LMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred ccCccchH----HHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHH
Confidence 211 111 22222222222222233333344446777 5899999999999999988887744
No 259
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.76 E-value=0.00055 Score=63.88 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=81.3
Q ss_pred HHHHHHhHHHHHh-hhh---cccch------hHHHHHHHHHHHHHHhhhccccchhhhccccccccccch---hhhHHHH
Q psy10432 81 LICISYGIVYTLC-CLT---KFSSD------FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVE---WLNLTFA 147 (440)
Q Consensus 81 ~~l~~~~~~~~~~-~~~---~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~ 147 (440)
|+++++.+++.+| ++. +.-++ .+.++++-.+.++|.|..-|+..++.. |.++++ +|.+.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~------dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGA------DQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHH------HCSSTTTTTHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHH------HHhcccchhhhhhhHH
Confidence 4667777777777 442 22222 367899999999999999999888888 877765 5778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHH
Q psy10432 148 RATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFI 193 (440)
Q Consensus 148 ~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 193 (440)
++..+.++|..+++.+.+++.+..|| ...|.+..+..++..+..
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~~~~--~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQNYGW--FLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCS-H--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHhhcccchhhccccch--hhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999 778887777666555443
No 260
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.70 E-value=5.5e-07 Score=86.54 Aligned_cols=145 Identities=13% Similarity=0.167 Sum_probs=102.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY 339 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 339 (440)
.++..+...++.++|+++.|++.|| +|||+.+..+..+..++.+.. .+...... +. ....+-.+.+++.|..
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~-~~~~~~~~-~~-----~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILI-AFAPSYNN-FW-----MLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccc-cccccccc-cc-----cccccccccccccccc
Confidence 5677888889999999999999997 999999999888887777555 32221101 11 2344445666678888
Q ss_pred hhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432 340 CPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK 413 (440)
Q Consensus 340 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (440)
.+....++.|..|++.|+...++.+....+|..++..+........+ ...|+..+....+..++..+.....+
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~Wr~~~~~~~~~~l~~~~~~~~~p 192 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD-NWGWRILLIFGAIPSLLVLLLRFFLP 192 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence 88999999999999999999999999988888888763211111112 23477777777666655444444333
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.69 E-value=0.048 Score=51.11 Aligned_cols=263 Identities=14% Similarity=0.097 Sum_probs=140.2
Q ss_pred hhHhhhHhhcCC---ChhhHHHHHHHHHHHHh-hhhccccccccccchhHHHHHHhHHHHHh-hhhccc---------ch
Q psy10432 36 PYVYKVYKDYGY---DEKNIALLYIAGFASSM-IFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS---------SD 101 (440)
Q Consensus 36 ~~~~~~~~~~g~---s~~~~~~~~~~~~~~~~-l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~---------~~ 101 (440)
.++-++-+.+.+ ++..+..+-..+...+. ++.++.+++.+++.|.+++-.-+..+... .++++. ++
T Consensus 44 ~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~ 123 (509)
T COG3202 44 NLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPD 123 (509)
T ss_pred HHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence 344344455544 34555556566666443 33478999999999999865544333332 222211 11
Q ss_pred -----------------------hHHHHHHHHHHHHHHhhhcc-ccchhhhccccccccccchhhhHHHHHHHHHHHHHH
Q psy10432 102 -----------------------FYILLYGRLFGGIATSILFS-GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA 157 (440)
Q Consensus 102 -----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (440)
.|..-+.....=+=.+.... ....... |.+..+|-.|..++++.+.+++.
T Consensus 124 ~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faN------eitt~~eakRFy~lf~l~~ni~l 197 (509)
T COG3202 124 PEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFAN------EITTIEEAKRFYPLFGLGANISL 197 (509)
T ss_pred HHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHH------HhhhHHHhhhhHHHHHHHHHHHH
Confidence 02111111111111111111 1111224 88888999999999999999999
Q ss_pred HHHHHHHHHHHhhc-cc---C----chhhHHHHHHHHHHHHHHHHHhcc----ccCC-----CCCccCCCCccchhhhhh
Q psy10432 158 IVSGFTAHFFADIL-NL---G----PIAPFAVAIPFLLGSTLFIYFCWE----EHYD-----PKTAKSSLLPNSMFSSLK 220 (440)
Q Consensus 158 ~~g~~~~~~l~~~~-gw---~----~~~~~~~~~~~~~~~~~~~~~~~~----e~~~-----~~~~~~~~~~~~~~~~~~ 220 (440)
.++..+..++.++- .+ . -+..+.+......+ .+...+++. +++. .++++++..+....++++
T Consensus 198 llsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i-~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k 276 (509)
T COG3202 198 LLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGII-AILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFK 276 (509)
T ss_pred HHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHH
Confidence 99988888887641 10 0 01222222222222 222222222 2222 111122223445678889
Q ss_pred hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hcc------CCchhhHHHHHHHH-HHHHHHHHHHHHhhccCCchhH
Q psy10432 221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVL------SPPLGLVFSCFMIS-IMIGSKIYSILILKYFKPETML 292 (440)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~g~~~~~~~~~-~~~~~~~~g~l~~r~~~~~~~~ 292 (440)
.+.++|.++.+.+...+...+...+-..|-.-. +.+ ..-.|-.....++. .++....++.+.+| .|-....
T Consensus 277 ~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~-~GW~~~A 355 (509)
T COG3202 277 MILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRR-VGWFTGA 355 (509)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-hhHHHHH
Confidence 999999888877777776666655544444333 111 13334444455555 55666788889997 8777666
Q ss_pred HHHHHHHHHHHHHH
Q psy10432 293 TLTVYLATFSITVS 306 (440)
Q Consensus 293 ~~~~~~~~~~~~~~ 306 (440)
.+.-+...++.++.
T Consensus 356 litPiv~litg~lF 369 (509)
T COG3202 356 LITPLVMLITGVLF 369 (509)
T ss_pred HHHHHHHHHHHHHH
Confidence 65555555554333
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.58 E-value=0.0015 Score=64.93 Aligned_cols=152 Identities=12% Similarity=0.102 Sum_probs=102.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (440)
..+..++.......-+...++|++.|+++|+++.+.++.++..++..++ .+...+..... ......+.++.+...+.|
T Consensus 23 ~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~ll-ai~a~~~~~~~-~~~~~~l~gLaLia~G~G 100 (654)
T TIGR00926 23 STSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALL-SFGAIPSSGHP-LHDLLDLLGLALIALGTG 100 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HhccCcccccc-hHHHHHHHHHHHHHhhcc
Confidence 4444455555555567778899999988899999988888888877655 33222111000 001124566667777888
Q ss_pred chhhhHHhHhccCCcch---hhHHHHHHhhhhhhhHHHHHHHHhhccccccC------ccchhhHHHHHHHHHHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEK---ARATITNWLRVPTNFITCFTLIFIKNEDAEGG------KLIAIHSVFVVCTACLLVALLA 408 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 408 (440)
..-|...+...+..+++ ++-+.+.+.....++|+.+++.+. ..+.+ ...+|...|.+.+++++++.++
T Consensus 101 giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~---~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 101 GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIIT---PILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 88888888888877643 467788888889999999888754 33321 0236888999998888888777
Q ss_pred HHHhhh
Q psy10432 409 SCVFKR 414 (440)
Q Consensus 409 ~~~~~~ 414 (440)
....++
T Consensus 178 f~~g~k 183 (654)
T TIGR00926 178 FMAGSK 183 (654)
T ss_pred HHHhcc
Confidence 665444
No 263
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.54 E-value=0.00025 Score=49.19 Aligned_cols=72 Identities=8% Similarity=0.144 Sum_probs=60.2
Q ss_pred HHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHH
Q psy10432 31 DWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYIL 105 (440)
Q Consensus 31 ~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l 105 (440)
...+.|.+|.+.+|.++|.++.++ ...+||+++.+ ...++.++..+++.+..+.+...+. ..+++.++++..
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl---~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGAL---LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 445889999999999999999988 67778888876 8888889988888899999988888 688888877654
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.48 E-value=0.015 Score=52.44 Aligned_cols=149 Identities=11% Similarity=-0.000 Sum_probs=86.8
Q ss_pred hhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432 252 VLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA 328 (440)
Q Consensus 252 ~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (440)
.|+.++ .+++.++........+...+.|.+.|| +|||+......++..++++.- . .+. .. .++++
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k-~----~~~-~~-----~L~~G 127 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTK-H----SSN-YP-----VLLLG 127 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH-h----ccc-cH-----HHHHH
Confidence 335555 678888888888899999999999998 999998888777777766433 1 111 11 23444
Q ss_pred HHHHHHhhhchhhhHHhHh-----ccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC-ccchhhHHHHHHHHHH
Q psy10432 329 FLIYEISVGMYCPVTGYLR-----GRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG-KLIAIHSVFVVCTACL 402 (440)
Q Consensus 329 ~~~~~~~~g~~~~~~~~~~-----~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 402 (440)
=.+.++...+.+...-++. .+-.|++..+..++......|...+++.-++ + ....+ ...+...+|.....+.
T Consensus 128 RvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~-a-~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 128 RVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVV-A-NVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHH-H-HHHHHHhCCCCcchHHHHHHHH
Confidence 3333334444444332222 2335667777777655533333323332222 1 12222 0224477888888887
Q ss_pred HHHHHHHHHhhh
Q psy10432 403 LVALLASCVFKR 414 (440)
Q Consensus 403 ~~~~~~~~~~~~ 414 (440)
.++.++.....+
T Consensus 206 ~~~~~~I~~~W~ 217 (354)
T PF05631_consen 206 AVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHhccc
Confidence 777776654443
No 265
>KOG3880|consensus
Probab=97.37 E-value=0.0027 Score=55.16 Aligned_cols=295 Identities=13% Similarity=0.044 Sum_probs=151.5
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccc
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLN 133 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 133 (440)
.-.+..+...+ ......||+---+-..+..++.+.+ .+.+++++.++-+.+-.+..++.|.......++-.
T Consensus 70 aDilPsL~iKl---~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss----- 141 (409)
T KOG3880|consen 70 ADILPSLAIKL---TAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS----- 141 (409)
T ss_pred hhhhHHHHHHH---hchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-----
Confidence 33444444444 5666778764322233445556667 68899999999999988888888876443322222
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCc----c--
Q psy10432 134 YYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA----K-- 207 (440)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~----~-- 207 (440)
.+ .....+.++.+.+.+.++|..--..+.++.+...+...++...+-++.+...++.+++++..... .
T Consensus 142 --~Y----~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~ 215 (409)
T KOG3880|consen 142 --RY----PSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE 215 (409)
T ss_pred --cC----CCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce
Confidence 22 22345566677777778888777777777777777766666655544444445555543321100 0
Q ss_pred ---C--------CCC-----ccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc---cC------Cchhh
Q psy10432 208 ---S--------SLL-----PNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV---LS------PPLGL 262 (440)
Q Consensus 208 ---~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~g~ 262 (440)
+ +.+ ....++.++. -++++..++-....+..-|.......+.+.. .| .+.-+
T Consensus 216 ~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~---i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRw 292 (409)
T KOG3880|consen 216 IIPSQYLPFEAAEEKSVPSRRLGLKETLKR---IKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRW 292 (409)
T ss_pred eccCCCCcccccccccCchhhhcHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchh
Confidence 0 000 1111122211 1233334444555555555444434443311 11 33444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432 263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV 342 (440)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 342 (440)
....+.+|..+.+- +-| .=+-+.+..-.++..+-.+.. .+ ....|..|.....++.+..-+..-|..+..
T Consensus 293 yqvlYQlGVFiSRS-----S~~-~~~~p~l~~LailQ~vNl~ff-~~---~a~~~ftpsi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 293 YQVLYQLGVFISRS-----SIN-LFTMPYLWLLAILQFVNLLFF-LL---QAWYWFTPSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hheeeeeeEEEEec-----cce-EEechHHHHHHHHHHHHHHHH-HH---HHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence 54555544433221 111 112222222223333322221 11 111133322223444444344445555665
Q ss_pred HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
..--+.+..++++|--+++.....-.+|..++..
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~ 396 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGL 396 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHH
Confidence 5556666668899999999999888888887776
No 266
>KOG2816|consensus
Probab=97.33 E-value=0.0037 Score=59.42 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432 267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL 346 (440)
Q Consensus 267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 346 (440)
.++..++.++..|.++|| +|||..+........+....+.. .. |. .++ ..-.....+.......++
T Consensus 71 ~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~~l~~~~~~~-~~-----~~------~~~-~~~l~g~~~~~~s~~~a~ 136 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDR-YGRKVVLLLPLFGTILPALCLLF-QG-----YW------FFL-LLGLSGGFSAIFSVGFAY 136 (463)
T ss_pred hHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHHHHhHHHHHH-HH-----HH------Hhh-hcccccchhhhhhhhhhh
Confidence 367888999999999997 99999988888777776655522 11 11 111 111111233356677888
Q ss_pred hccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 347 RGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
+.+....+.|....|+.+.....+..++|. .+ +.... ..++...|.+..+..++..+......+
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~--~~-~~~~~-~~~~a~~f~ia~~~~~~~~~y~~~~l~ 200 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPA--LG-GYLVK-FLGIALVFLIAAASGILSLLYMLLFLP 200 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHH--HH-HHHHH-hcCchHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999998 34 66666 678888999988888877776655443
No 267
>KOG1237|consensus
Probab=97.30 E-value=0.11 Score=51.05 Aligned_cols=147 Identities=11% Similarity=-0.011 Sum_probs=97.4
Q ss_pred hhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhccc--------------
Q psy10432 36 PYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFS-------------- 99 (440)
Q Consensus 36 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~-------------- 99 (440)
..+..+.++++.+...+.-....-.....+..+..+.++|- +||-+++.++.++..++ .+..++
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 34434447777766554444444444444444689999996 48888888877766665 221110
Q ss_pred ------c-----hhHHHHHHHHHHHHHHhhhccccchhhhcccccccccc---ch-hh--hHHHHHHHHHHHHHHHHHHH
Q psy10432 100 ------S-----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP---VE-WL--NLTFARATFGSGLFAIVSGF 162 (440)
Q Consensus 100 ------~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~r--~~~~~~~~~~~~~g~~~g~~ 162 (440)
+ ....++.+.-+..+|.|..-|...++-. |.++ ++ ++ ..-+.++....+.|..++..
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGa------dQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGA------DQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcc------cccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 0 1235677777888899998888777777 8777 32 22 36788889999999999998
Q ss_pred HHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432 163 TAHFFADILNLGPIAPFAVAIPFLLGST 190 (440)
Q Consensus 163 ~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 190 (440)
+-.+.-+..+| ..-|.+......++.
T Consensus 213 ~~vyiq~~~~w--~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 213 VLVYIQDNVGW--KLGFGIPTVLNALAI 238 (571)
T ss_pred HHHhhhhcccc--eeeccHHHHHHHHHH
Confidence 88888888899 655655554444333
No 268
>KOG2563|consensus
Probab=97.28 E-value=0.03 Score=51.83 Aligned_cols=113 Identities=14% Similarity=0.038 Sum_probs=73.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc---ccchhhcchhHHHHHHHHHHH
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL---FDSRRVLSTNLCFVAFLIYEI 334 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 334 (440)
..+-+...++.+..+.-.+..-|+.|| +|-|....++....+++..+= .....+ +..+.. ....+-.+.+.
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir-~iss~p~v~~~f~~~----l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIR-LISSLPFVPPLFRRP----LTHTGQSIAAA 152 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHh-hhccCccccccchhh----hhHHhHHHHHH
Confidence 344566777888888889999999997 999999999998888877544 333333 222211 22333332222
Q ss_pred hhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 335 SVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 335 ~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
..-.......-+....+|+++|+.+..+..+...+|.+++..
T Consensus 153 Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 153 AQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred hhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 222222233344555689999999999888888888777665
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.18 E-value=0.23 Score=47.25 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=64.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCc-hhHHHHHHHHHHHHHHHHHhhhccc-cch--hhcchhHHHHHHHHHHHhh
Q psy10432 261 GLVFSCFMISIMIGSKIYSILILKYFKPE-TMLTLTVYLATFSITVSTVLTSSLF-DSR--RVLSTNLCFVAFLIYEISV 336 (440)
Q Consensus 261 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 336 (440)
-..+..+.++..+|+.+..+..- .+++ +.+.+..+.-.+. +.++.+..... ... ..+.-...++...++++..
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~--p~~~~~~l~i~s~~R~iF-IPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMW--PDEDSRWLPILSFLRVLF-IPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEe--eCCCccchHHHHHHHHHH-HHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 45667778888899886654311 1222 1333333332222 22222222110 000 0011113344556777778
Q ss_pred hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
|...........+.+++++|..+..+......+|..+|..
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAV 426 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777777888888888888888888888888777776
No 270
>KOG3097|consensus
Probab=97.16 E-value=0.089 Score=46.57 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=49.5
Q ss_pred cccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhh
Q psy10432 69 VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128 (440)
Q Consensus 69 ~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 128 (440)
+.+.+..++|-|.++.++...+......-+-+.+..++-.....|++.+....+--+++.
T Consensus 77 ~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 77 FMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceec
Confidence 455889999999999999998888866667788999999999999999988655444444
No 271
>KOG2601|consensus
Probab=97.07 E-value=0.043 Score=49.37 Aligned_cols=151 Identities=14% Similarity=0.135 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhhhhhHhhhH-hhcC-CChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh------
Q psy10432 22 IPFFLATFSDWIQGPYVYKVY-KDYG-YDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC------ 93 (440)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~~g-~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~------ 93 (440)
..++++..++-+..-.. .++ .+++ -|...++.--.+-.....+++|+.|...|+..|+|++...+.+.-++
T Consensus 34 ~gy~lt~wgdR~W~F~V-sL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagg 112 (503)
T KOG2601|consen 34 LGYFLTTWGDRMWEFSV-SLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGG 112 (503)
T ss_pred HHHHHhHhhHhHHHHHH-HHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHH
Confidence 34444444444433333 233 3343 33333322223333344556689999999999999977655543332
Q ss_pred -hhhccc------chhHHHHHHHHHHHHHHhh--hccccchhhhccccccccccchhh---hHHHHHHHHHHHHHHHHHH
Q psy10432 94 -CLTKFS------SDFYILLYGRLFGGIATSI--LFSGFESWYVNEHLNYYLFPVEWL---NLTFARATFGSGLFAIVSG 161 (440)
Q Consensus 94 -~~~~~~------~~~~~l~~~r~l~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~g~~~g~ 161 (440)
++..+. .+++.+..+-++.-.-.+. ......+....+-.+.-....+.+ .+.++.....-....++.|
T Consensus 113 lvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lap 192 (503)
T KOG2601|consen 113 LVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAP 192 (503)
T ss_pred HHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhh
Confidence 122222 2444444444333322222 112111222211111111133334 4444666777777889999
Q ss_pred HHHHHHHhhccc
Q psy10432 162 FTAHFFADILNL 173 (440)
Q Consensus 162 ~~~~~l~~~~gw 173 (440)
++.|.+.++.+-
T Consensus 193 v~tg~Iitfvsl 204 (503)
T KOG2601|consen 193 VITGLIITFVSL 204 (503)
T ss_pred hhhcccceeech
Confidence 999999888776
No 272
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.84 E-value=0.012 Score=40.49 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=44.8
Q ss_pred HHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHH
Q psy10432 233 IVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVY 297 (440)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 297 (440)
...++.+++...+.-+++.++++.| .+.|.+.++..+..+++.++.|+++|| .++++.......
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~ 73 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHH
Confidence 3344444554444343444444333 889999999999999999999999998 888887655443
No 273
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.71 E-value=0.24 Score=47.37 Aligned_cols=119 Identities=8% Similarity=-0.018 Sum_probs=71.8
Q ss_pred CchhhHHHHHHHHHHHH-HHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcc---------------
Q psy10432 258 PPLGLVFSCFMISIMIG-SKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLS--------------- 321 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~-~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 321 (440)
+...++.+...+.+.+. .++.+++++| .++++............+.++ .+...+..+...|.
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~~~~F~~~f~lF-~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTVISPFLGFFALF-AFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHHHHHHHHHHHHH-HHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 45666666665555555 7899999997 999988776655554444333 22211111110000
Q ss_pred -------hhHHHHHHHHHHHhhhchhh-hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 322 -------TNLCFVAFLIYEISVGMYCP-VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 322 -------~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
.+..-..+...........+ ..+..++|....++..|.+++.....++|..+++.+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111111222333 6788999999999999999999999999999999754
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.65 E-value=0.097 Score=41.64 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhH
Q psy10432 264 FSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVT 343 (440)
Q Consensus 264 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 343 (440)
.++......+..++.+.+.++ +|.|+.+.++.+...+-.... .. +. + . ..+.+-.+.+++.+..+...
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~-~~---~~--~-~----~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASF-FY---PN--S-Y----TLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHH-Hh---hh--H-H----HHHHHHHHHhhhhHHhhHhh
Confidence 344445566777888888997 999999998888777655443 21 11 1 1 34555567777788888888
Q ss_pred HhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432 344 GYLRGRIIPEKARATITNWLRVPTNFITCFTLIF 377 (440)
Q Consensus 344 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 377 (440)
..++.+..+++++++..++.-.+.+.+..+|...
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 8889999888999999998888887777777653
No 275
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.54 E-value=0.039 Score=52.59 Aligned_cols=149 Identities=13% Similarity=0.134 Sum_probs=83.5
Q ss_pred hccCCchhhHHHHHHHHHH--HHHHHHHHHHhhcc---C--CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432 254 EVLSPPLGLVFSCFMISIM--IGSKIYSILILKYF---K--PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF 326 (440)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~--~~~~~~g~l~~r~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (440)
+..+.+.........+..+ ...++.|.++|- + | ||.-+.++.++..++...+........... ...
T Consensus 18 ~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~-~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~------~~~ 90 (433)
T PF03092_consen 18 DDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDS-FPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA------IAV 90 (433)
T ss_pred HHcCCCHHHHHHHHHHHhCchHHhhhHHhhccc-ccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh------hHH
Confidence 4445444444444444443 345899999996 4 2 333455566555444444422222111111 222
Q ss_pred HHHHHHHHhhhchhhhHHhHhccCC---cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432 327 VAFLIYEISVGMYCPVTGYLRGRII---PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL 403 (440)
Q Consensus 327 ~~~~~~~~~~g~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (440)
+.+.+..++....-....++..|.. |.+ +|...+.......+|+.++.. .+ |...+ ..+++..|.+.+.+..
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~--l~-G~l~~-~~~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSL--LS-GPLLD-SFGPQGVFLISAALPL 165 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHH--hh-hhhhh-cCCCeEEehHHHHHHH
Confidence 3333333444444444555555543 444 788888888888899998887 34 66777 6778888888877766
Q ss_pred HHHHHHHHhhh
Q psy10432 404 VALLASCVFKR 414 (440)
Q Consensus 404 ~~~~~~~~~~~ 414 (440)
+..+......+
T Consensus 166 l~~~~~~~~~~ 176 (433)
T PF03092_consen 166 LMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHhhh
Confidence 66555544444
No 276
>KOG1479|consensus
Probab=96.53 E-value=0.65 Score=42.94 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432 267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL 346 (440)
Q Consensus 267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 346 (440)
+.+...+|.....++.++ ++|. +.+...+-.+.. -++.+...+........-+..+....++++..|-.......+
T Consensus 292 fN~~d~vG~~~a~~~~~~--~~r~-l~i~v~lR~lfi-PlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~ 367 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWP--DPRK-LTIPVLLRLLFI-PLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMY 367 (406)
T ss_pred hHHHHHhhhhhhhcccCC--CCce-ehHHHHHHHHHH-HHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehh
Confidence 667778887777766543 3333 333333322222 222322211110000011123444455666667666777777
Q ss_pred hccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 347 RGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
..+.+|++++-.+-.+.......|...|..
T Consensus 368 aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 368 APKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 777777777666655555555555555554
No 277
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.49 E-value=0.024 Score=52.91 Aligned_cols=120 Identities=13% Similarity=0.118 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch---hhHHHHHHhhhh
Q psy10432 290 TMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK---ARATITNWLRVP 366 (440)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~ 366 (440)
+.+.++.+...++.+++ .+...+.............+++.+..++.|..-|....+..|..+++ ++.+.+..+...
T Consensus 2 ktI~~g~~~~~~G~~ll-~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLL-TLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH---HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHh-HHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 45666777777777664 33222222100001114677777888899999999999998888765 567788889999
Q ss_pred hhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 367 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
.++|..+++... +++.+ ..+|...|.++++..+++.+..+.-++
T Consensus 81 in~G~~~~~~~~---~~i~~-~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 81 INIGSLFSPTLV---PYIQQ-NYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHCC---CHHHH-CS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HhhhhHhhcccc---hhhcc-ccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 999999998833 66666 889999999999998888877665544
No 278
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.21 E-value=0.044 Score=46.95 Aligned_cols=96 Identities=11% Similarity=0.044 Sum_probs=47.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH---Hhh--cccCchhhHHHHHHHHHHHHHHHHHhcccc--CCCC-CccCCCC
Q psy10432 140 EWLNLTFARATFGSGLFAIVSGFTAHFF---ADI--LNLGPIAPFAVAIPFLLGSTLFIYFCWEEH--YDPK-TAKSSLL 211 (440)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~~--~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~-~~~~~~~ 211 (440)
++|+........+.++|.++.-..--.- .+. -.| +..+.+.+.+..+.+++..++=+|- ..++ +++++..
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W--~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~ 79 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNW--QWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENS 79 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccc
Confidence 4555666666677777776643321111 111 246 7676666655554444333332221 1111 1111111
Q ss_pred ccchhhhhhhhccCcchHHHHHHHHH
Q psy10432 212 PNSMFSSLKFLFTNPCLLTLGIVQSI 237 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (440)
..+..+..++.+|++..|...+....
T Consensus 80 ~~~~~~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 80 TLSKKPSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred cccccchHHHHHccchHHHHHHHHHH
Confidence 12234577788999998886555433
No 279
>KOG0637|consensus
Probab=96.15 E-value=0.021 Score=52.86 Aligned_cols=141 Identities=10% Similarity=0.025 Sum_probs=86.0
Q ss_pred HHHHHhHHHHHHHhhhhhhh---ccCCchhhHHHHHHHHHHHHHHHHHHHHhh---ccCCchhHHHHH-HHHHHHHHHHH
Q psy10432 235 QSIYEGIMYTFIFVWTPVLE---VLSPPLGLVFSCFMISIMIGSKIYSILILK---YFKPETMLTLTV-YLATFSITVST 307 (440)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~~~~-~~~~~~~~~~~ 307 (440)
.+-.+++...-..+.+|++. ..+...+.+.....+..++.+++.|..+|| |+||||..+... ....++..++
T Consensus 41 a~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Li- 119 (498)
T KOG0637|consen 41 AAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLI- 119 (498)
T ss_pred HHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhh-
Confidence 33334444444456777774 344777788888888889999999999998 788888755444 4444444333
Q ss_pred Hhhh------ccccch--hhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHH-HHHHhhhhhhhHHHHHHH
Q psy10432 308 VLTS------SLFDSR--RVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARAT-ITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 308 ~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~-~~g~~~~~~~~g~~~~~~ 376 (440)
.+.. ..+... ..-.....++++.+.-+..........++..+...++++-+ +++.......+|+.+|-.
T Consensus 120 g~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~ 197 (498)
T KOG0637|consen 120 GYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA 197 (498)
T ss_pred hhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence 2211 111111 00011134455555555565566666777777766665555 888888888888877766
No 280
>PRK03612 spermidine synthase; Provisional
Probab=96.04 E-value=0.24 Score=48.25 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=65.1
Q ss_pred hhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH---HHHHHHhhhccccchhhcchhHHHH
Q psy10432 251 PVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS---ITVSTVLTSSLFDSRRVLSTNLCFV 327 (440)
Q Consensus 251 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (440)
++++..-...+.+.+.+..+..+|+.+.+++.++ . .++....-..+..++ ...+...... ...... ....
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~-~~~~~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~----~~~~ 115 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-A-AAGFVAVELLLALLGGLSALILYAAFAF-QGLSRL----LLYV 115 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH----HHHH
Confidence 3333333556777777778888888887776543 2 222222111111111 1111111110 000101 1222
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL 403 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (440)
...+.++..|...|....+..+.. .++.|+..|-......+|+.+|..+. + -.+.. ..|......+.+.+.+
T Consensus 116 ~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~-~-~vLlp-~lG~~~t~~~~a~l~~ 187 (521)
T PRK03612 116 LVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAF-P-FLLLP-RLGLIRTAALTGSLNL 187 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHH-H-HHHHH-hcchHHHHHHHHHHHH
Confidence 223456778888887776666542 22334445555556666666666533 1 11222 4454444444444433
No 281
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.95 E-value=1.2 Score=42.15 Aligned_cols=140 Identities=11% Similarity=0.016 Sum_probs=75.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH----HHHHHHHhhhcccc----chhhcchhHHHHHH-H
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF----SITVSTVLTSSLFD----SRRVLSTNLCFVAF-L 330 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~ 330 (440)
.+..-..-.+..++.++..|++.|| ..|.+....+.+..-+ ++..+......... .+.. ...+.. .
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~----~~l~~~~~ 114 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLF----IALFALLI 114 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHH----HHHHHHHH
Confidence 3444455567778888999999997 8888877666544322 22222111111111 1111 111111 1
Q ss_pred HHHHhhhchhh-----hHHhHhccCC--cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432 331 IYEISVGMYCP-----VTGYLRGRII--PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL 403 (440)
Q Consensus 331 ~~~~~~g~~~~-----~~~~~~~~~~--p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (440)
+.+...-.... .-.-++.... +++...+.++..+-+-.....++|.++ |.+.+ ..++.....+.++..+
T Consensus 115 ~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~v---G~l~t-~~s~~~~~~~i~~~N~ 190 (432)
T PF06963_consen 115 LLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFV---GLLMT-FASPVIAAIFIAGWNL 190 (432)
T ss_pred HHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHH---HHHhh-ccCHHHHHHHHHHHHH
Confidence 11111111111 1111222222 455777788888888888999999966 66766 6777777777777777
Q ss_pred HHHHH
Q psy10432 404 VALLA 408 (440)
Q Consensus 404 ~~~~~ 408 (440)
++...
T Consensus 191 ~S~~v 195 (432)
T PF06963_consen 191 ASVFV 195 (432)
T ss_pred HHHHH
Confidence 76655
No 282
>PRK03612 spermidine synthase; Provisional
Probab=95.58 E-value=0.57 Score=45.74 Aligned_cols=60 Identities=18% Similarity=0.088 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hccc
Q psy10432 107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-ILNL 173 (440)
Q Consensus 107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw 173 (440)
..-++.++..|...|....... +. ..++-++..|.......+|.++|.++.+++.- .+|-
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~------~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQ------RI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------hc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence 3445567777777663322222 21 12235677888999999999999998877643 5553
No 283
>KOG3098|consensus
Probab=95.21 E-value=0.36 Score=45.71 Aligned_cols=116 Identities=16% Similarity=0.234 Sum_probs=78.6
Q ss_pred hcCCChhhHHHHHHHHHHHHhhhh-ccccccc---cccchhHHHHHHhHHHHHh-hhhcc------------------cc
Q psy10432 44 DYGYDEKNIALLYIAGFASSMIFG-IVVGSIA---DKFGRKLICISYGIVYTLC-CLTKF------------------SS 100 (440)
Q Consensus 44 ~~g~s~~~~~~~~~~~~~~~~l~~-~~~G~l~---Dr~Grr~~l~~~~~~~~~~-~~~~~------------------~~ 100 (440)
..+.+...+-.++.++...+.+.. .+.+.+. +|+||++.+.++..+..++ ++.-. .+
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 445555555446666666665543 4555555 5689999998888887776 33211 12
Q ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHF 166 (440)
Q Consensus 101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (440)
++...++.-++.|++.+......+..+. +.. +++|.++.++...-..++..++-.....
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~------~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYVIIA------LLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHH------HHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4556778889999999998776666665 777 7788899988888777777665544433
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.89 E-value=0.84 Score=42.49 Aligned_cols=69 Identities=10% Similarity=0.133 Sum_probs=57.8
Q ss_pred hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432 96 TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI 170 (440)
Q Consensus 96 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 170 (440)
.-+.++.|..++.-+..|+.+|..+......+. |..++++|..++|..+.+.+.|..++..++-.+-..
T Consensus 329 ~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~------~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~~ 397 (402)
T PF02487_consen 329 YRFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS------EEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEPW 397 (402)
T ss_pred HHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH------hcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 445688999999999999999998665555555 889999999999999999999999999888766543
No 285
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.73 E-value=0.0061 Score=59.40 Aligned_cols=121 Identities=11% Similarity=0.006 Sum_probs=1.1
Q ss_pred hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccch----------------
Q psy10432 254 EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSR---------------- 317 (440)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 317 (440)
+....+.|++.+.+-++.++..++..++.+| ..|.|.+-.+.++.+++.++. .+.......+
T Consensus 34 ~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~-~lPhf~~~~y~~~~~~~~~~~~~~~~ 111 (539)
T PF03137_consen 34 GLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLF-ALPHFLSGPYSYEEASNSNGNSSISS 111 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHH-hccHhhcCCCcccccccccccccccc
Confidence 3334889999999999999999999999987 677777778888888877655 3311000000
Q ss_pred -------------------------hhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHH
Q psy10432 318 -------------------------RVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITC 372 (440)
Q Consensus 318 -------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 372 (440)
........+++-.+.+++....++...++++|++++++.+...|+......+|-+
T Consensus 112 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 112 NLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ----------------------------------------SSS-------------------------------------
T ss_pred ccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence 0000011222222333333447788899999999999999999998888877766
Q ss_pred HHHH
Q psy10432 373 FTLI 376 (440)
Q Consensus 373 ~~~~ 376 (440)
+|-.
T Consensus 192 ~Gf~ 195 (539)
T PF03137_consen 192 LGFL 195 (539)
T ss_dssp ----
T ss_pred HHHH
Confidence 6654
No 286
>KOG3626|consensus
Probab=94.31 E-value=0.28 Score=48.98 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=98.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhh---hcc-------------cc------
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLT---SSL-------------FD------ 315 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------~~------ 315 (440)
.+.|++...+-++..+......+...| ..|.+.+-.+.++++++.++. .+. ..+ ..
T Consensus 132 s~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgsll~-alPHf~~~~y~~~~~~~~~~~~~~~~~~s~ 209 (735)
T KOG3626|consen 132 SQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGSLLF-ALPHFFSGPYEYELEVIKQSVENPSSSLSF 209 (735)
T ss_pred CcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHHHHH-hChHHhcCcchhhhhhhhccccCCccccch
Confidence 678888888888888888888888886 777788888888888877665 331 000 00
Q ss_pred ----------------c----hhhc-chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHH
Q psy10432 316 ----------------S----RRVL-STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFT 374 (440)
Q Consensus 316 ----------------~----~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~ 374 (440)
. .... .....+.+..+.+++....++...++++|.+.+++.....|+..++..+|=++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiG 289 (735)
T KOG3626|consen 210 CCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIG 289 (735)
T ss_pred hhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHH
Confidence 0 0000 001222333344444444788888999999999999999999888877776655
Q ss_pred HHHh---hc-cccc--c-------Cc-c-chhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 375 LIFI---KN-EDAE--G-------GK-L-IAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 375 ~~~~---~~-~~~~--~-------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
-.+- .. +... . |. + ..|...|++++.+.++..+..+.+++
T Consensus 290 fllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 290 FLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK 344 (735)
T ss_pred HHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 5421 00 0011 0 10 1 12556778888888888887777776
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.29 E-value=0.94 Score=40.26 Aligned_cols=109 Identities=18% Similarity=0.253 Sum_probs=71.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432 259 PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM 338 (440)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (440)
..++......+...++.+..|++.|| .|+|+.+..+......+.+.. .+... .... .........++..+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~----~~~~~~~~~g~~~~~ 110 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLL-ALAPN---VGLA----LLLILRLLQGLGGGG 110 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHH-HhCcc---chHH----HHHHHHHHHHhhhHH
Confidence 46788888888888888999999997 888866666655423332222 11111 1111 222332234556667
Q ss_pred hhhhHHhHhccCCcc-hhhHHHHHHhhh-hhhhHHHHHHH
Q psy10432 339 YCPVTGYLRGRIIPE-KARATITNWLRV-PTNFITCFTLI 376 (440)
Q Consensus 339 ~~~~~~~~~~~~~p~-~~~g~~~g~~~~-~~~~g~~~~~~ 376 (440)
..+....+..+..|+ +.|+...+.... ....+..+++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 111 LLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999887 678888888777 46667777764
No 288
>KOG1479|consensus
Probab=92.86 E-value=6 Score=36.84 Aligned_cols=86 Identities=10% Similarity=0.145 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432 325 CFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLV 404 (440)
Q Consensus 325 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (440)
.+....+...+.+..+........+. |+|.....++-.+.++.+.+...-..- ....|...+-..-|.+..+..++
T Consensus 120 t~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqavm~G~a~aG~l~Sl~~i~tk---a~~~~~~~sA~~yF~~s~~~~ll 195 (406)
T KOG1479|consen 120 TLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQAVMSGQALAGTLTSLLRILTK---AAFSDSRTSALIYFITSTVILLL 195 (406)
T ss_pred HHHHHHHHhhhhhhhccchhhhhhcC-CHHHHHHHHhcchhHhHHHHHHHHHHH---HhcCCCCceeehhHHHHHHHHHH
Confidence 44444556666666777777777776 777766665544444444333322211 11122133444556666667777
Q ss_pred HHHHHHHhhh
Q psy10432 405 ALLASCVFKR 414 (440)
Q Consensus 405 ~~~~~~~~~~ 414 (440)
+.+.+..+++
T Consensus 196 C~i~y~~l~~ 205 (406)
T KOG1479|consen 196 CFVLYLVLPK 205 (406)
T ss_pred HHHHHHHhhc
Confidence 7777664443
No 289
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=91.41 E-value=6.3 Score=36.95 Aligned_cols=124 Identities=10% Similarity=0.030 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch---hhhHHhHhcc
Q psy10432 273 IGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY---CPVTGYLRGR 349 (440)
Q Consensus 273 ~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~ 349 (440)
...+....+.|. .+.|..++...+...+...++.+ . . .+..+-+..+..|.. .....+++-.
T Consensus 56 ~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~-~--------~-----sv~~mq~~q~~yg~~~a~evay~sYiys 120 (412)
T PF01770_consen 56 AFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLF-G--------T-----SVLAMQLMQFFYGLATAAEVAYYSYIYS 120 (412)
T ss_pred HHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHH-H--------C-----cHHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 344566678895 88888888887776666555522 1 1 122222333344443 3345566666
Q ss_pred CCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc-ccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432 350 IIPEKARATITNWLRVPTNFITCFTLIFIKNE-DAEGGKLIAIHSVFVVCTACLLVALLASCVFKR 414 (440)
Q Consensus 350 ~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (440)
.+|+++--++.+..+...-.|..++..+ +- -...+ ..++.....+......++.++.+++++
T Consensus 121 ~v~~~~yq~vts~~raa~l~g~~~s~~l--gQllvs~~-~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 121 VVDKEHYQKVTSYTRAATLVGRFISSLL--GQLLVSFG-GVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7788887788877777766665555541 10 01113 556677767766666677777666655
No 290
>KOG3574|consensus
Probab=91.31 E-value=12 Score=34.64 Aligned_cols=54 Identities=6% Similarity=-0.059 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 325 CFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 325 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
..+.+.+..+....--.....+.-....+++.|-+........+.|.+++..++
T Consensus 136 lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 136 LTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 333444444444433334445555556777777777766677777777776544
No 291
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=90.35 E-value=1.9 Score=30.10 Aligned_cols=48 Identities=19% Similarity=0.274 Sum_probs=40.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS 306 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 306 (440)
.+.|++.+.+.++.++|.+...++.++ .++++.+..+.+...+..+.+
T Consensus 27 ~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 27 SQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999885 777777888877777766555
No 292
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.97 E-value=20 Score=34.83 Aligned_cols=37 Identities=8% Similarity=-0.032 Sum_probs=33.1
Q ss_pred hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
..+...+|..+.++..+.+++.....++|..++..+.
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~ 200 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLT 200 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999888654
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.38 E-value=13 Score=35.48 Aligned_cols=89 Identities=10% Similarity=0.079 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHh
Q psy10432 268 MISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLR 347 (440)
Q Consensus 268 ~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 347 (440)
.+..++.......+..| +..+.++..+.+...+..+....+.......+. .....+....+.+++.+........+.
T Consensus 55 ~v~~l~~~~~~~~~~~~-i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~--~f~~~~~~v~~~g~~~~~~q~s~~gla 131 (437)
T TIGR00939 55 QLPSLLFNSLNLFLIFR-IPVTVRLLGGLVILLVVVILVMVLVKVQTSETG--FFVTTMASVVIINSGMALLQGSLFGLA 131 (437)
T ss_pred HHHHHHHHHHHHHHhhc-cCccchhHHHHHHHHHHHHHHhheeeecCCcch--HHHHHHHHHHHHHhhhhhhcccchhhc
Confidence 34444555555566665 766666666655443333332122111111111 111344444556666777777777777
Q ss_pred ccCCcchhhHHHH
Q psy10432 348 GRIIPEKARATIT 360 (440)
Q Consensus 348 ~~~~p~~~~g~~~ 360 (440)
... |++..+..+
T Consensus 132 ~~f-p~~~~~a~~ 143 (437)
T TIGR00939 132 GVF-PSTYSSAVM 143 (437)
T ss_pred ccC-CHHHHHHHH
Confidence 765 766544433
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=87.87 E-value=26 Score=33.58 Aligned_cols=119 Identities=8% Similarity=-0.000 Sum_probs=67.7
Q ss_pred CchhhHHHHHHH-HHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhc-------cccchh------hc-ch
Q psy10432 258 PPLGLVFSCFMI-SIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS-------LFDSRR------VL-ST 322 (440)
Q Consensus 258 ~~~g~~~~~~~~-~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~-~~ 322 (440)
+....+-...-+ ++++...+..++.++ ..+++............++++ .+... ++..+. .| ..
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~fF~LF-a~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLGFFALF-AFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHH-HHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 555555555555 667788889999996 888887665544443333332 22111 110000 00 00
Q ss_pred hHHH-----HHHHHHHHh---hhc-hhh-hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 323 NLCF-----VAFLIYEIS---VGM-YCP-VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 323 ~~~~-----~~~~~~~~~---~g~-~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
-..+ +...++..+ .|. ... ..+...+|....++..|.+++.+...+++..++..+.
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 0000 111111111 111 222 5677888998999999999999999999988888754
No 295
>KOG4830|consensus
Probab=82.10 E-value=0.23 Score=42.49 Aligned_cols=61 Identities=18% Similarity=0.271 Sum_probs=42.5
Q ss_pred HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccc---------cccchhHHH-HHHhHHHHH
Q psy10432 32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIA---------DKFGRKLIC-ISYGIVYTL 92 (440)
Q Consensus 32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~---------Dr~Grr~~l-~~~~~~~~~ 92 (440)
+....++.-..++.|.++++...+...|.....+..|+.|... ||+|||+.. .++.++..+
T Consensus 34 ScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~lVsl 104 (412)
T KOG4830|consen 34 SCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTVLVSL 104 (412)
T ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccEEEEE
Confidence 3344455344478899998888888888888888888888655 499999874 334444444
No 296
>KOG1237|consensus
Probab=80.69 E-value=27 Score=34.72 Aligned_cols=148 Identities=10% Similarity=0.006 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccc--------h----hhcc---hhHHHH
Q psy10432 263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDS--------R----RVLS---TNLCFV 327 (440)
Q Consensus 263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~---~~~~~~ 327 (440)
......-.........++++|-..+|-+.+.++..+..++..++......+... . ..+. ......
T Consensus 78 ~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~ 157 (571)
T KOG1237|consen 78 NVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYG 157 (571)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHH
Confidence 333444444556678888888756788888888877777755552221111100 0 0000 112333
Q ss_pred HHHHHHHhhhchhhhHHhHhccCCcc----hhhH--HHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432 328 AFLIYEISVGMYCPVTGYLRGRIIPE----KARA--TITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC 401 (440)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~p~----~~~g--~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (440)
++.+...+.|..-|...+.-.+.+++ +.+. .-+.......+.|..++..+. -+..+ ..+|...|.+..++
T Consensus 158 ~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~---vyiq~-~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 158 ALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL---VYIQD-NVGWKLGFGIPTVL 233 (571)
T ss_pred HHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH---Hhhhh-cccceeeccHHHHH
Confidence 44444556666788888888887772 2223 567777788888888887744 34445 67788888888887
Q ss_pred HHHHHHHHHHhhh
Q psy10432 402 LLVALLASCVFKR 414 (440)
Q Consensus 402 ~~~~~~~~~~~~~ 414 (440)
..++.++.+...+
T Consensus 234 ~~lai~iF~~g~~ 246 (571)
T KOG1237|consen 234 NALAILIFLPGFP 246 (571)
T ss_pred HHHHHHHHHcCce
Confidence 7777766654433
No 297
>KOG3880|consensus
Probab=73.96 E-value=6.4 Score=35.11 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=54.5
Q ss_pred hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 94 CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA 168 (440)
Q Consensus 94 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 168 (440)
....+.++++..++.-+..|+-+|..+. ....-+.+..++++|..+++......++|..++..++-.+-
T Consensus 334 a~~~ftpsi~ivf~lI~~EGLlGGasYV------NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 334 AWYWFTPSIWIVFALILFEGLLGGASYV------NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHhccHHHHHHHHHHHHhhcCchHHH------HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 4577889999999999999998888744 33333347788999999999999999999888877764443
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=73.64 E-value=1.2 Score=40.23 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=3.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc-cc---chhhcchhHHHHHHHHHHHhhh
Q psy10432 262 LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL-FD---SRRVLSTNLCFVAFLIYEISVG 337 (440)
Q Consensus 262 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~g 337 (440)
..+..+.++..+|+.+.++..-+ ..+++.+....+.-.+. +.++...... .. +...+.-...++...++++..|
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWP-GPSPRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEec-ccccccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc
Confidence 35677889999999888774321 11333333332232222 2222222111 10 0000011123444556667777
Q ss_pred chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
-..........+.+++++|..+-.+.......|..+|..
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp ---HHHH--------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777788888888877777777777777776665
No 299
>KOG4332|consensus
Probab=72.56 E-value=22 Score=31.23 Aligned_cols=43 Identities=16% Similarity=0.001 Sum_probs=29.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF 301 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 301 (440)
.++|.++.......++...+.|-+.|| .|||+..+.-.+...+
T Consensus 72 G~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiL 114 (454)
T KOG4332|consen 72 GDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYIL 114 (454)
T ss_pred CccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHH
Confidence 566666665555666667788899997 9999875544444433
No 300
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=61.93 E-value=89 Score=25.70 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=23.6
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10432 135 YLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL 171 (440)
Q Consensus 135 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 171 (440)
+..|+++|.++.-+-..+..+--++--..+.++.+.+
T Consensus 23 ~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~~ 59 (183)
T PF03741_consen 23 RKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSIF 59 (183)
T ss_pred hCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888887765544444444555556667777663
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=60.64 E-value=1.1e+02 Score=30.20 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=16.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCc
Q psy10432 260 LGLVFSCFMISIMIGSKIYSILILKYFKPE 289 (440)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 289 (440)
.......+.+.+.+++..++++.+. ++.+
T Consensus 299 ~t~~i~~y~~~~~iaGy~S~~~yk~-~~g~ 327 (521)
T PF02990_consen 299 LTAAIILYALTSFIAGYVSARLYKS-FGGK 327 (521)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH-cCCC
Confidence 3344455556666666677776664 5443
No 302
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.38 E-value=67 Score=23.47 Aligned_cols=48 Identities=10% Similarity=0.275 Sum_probs=38.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS 306 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 306 (440)
...|-.++.++-..++.+++.++..|+ ..+.+-=.++..++.++...+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg-~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDG-VRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcC-cCCChHHHHhHHHHHHhHHhe
Confidence 667888999999999999999999997 888777677766666655443
No 303
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=57.98 E-value=1.4e+02 Score=30.68 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=32.1
Q ss_pred ccccccc----cchhHHHHHHhHHHHHh-h-hhcccchhHHHHHHHHHHHHHHhhh
Q psy10432 70 VGSIADK----FGRKLICISYGIVYTLC-C-LTKFSSDFYILLYGRLFGGIATSIL 119 (440)
Q Consensus 70 ~G~l~Dr----~Grr~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~r~l~G~~~~~~ 119 (440)
.+-++|. -||.+-++++.++++++ + .....+..+.+..+-++.+++.++.
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 3444553 35666677888888876 4 3445566667777777777766665
No 304
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=57.07 E-value=42 Score=25.99 Aligned_cols=54 Identities=15% Similarity=0.249 Sum_probs=32.4
Q ss_pred HhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432 346 LRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF 412 (440)
Q Consensus 346 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (440)
.+.+++|+..|..+.+..+............ .+ +..|++..-.+++++-+.+-+
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~~~~--~g-----------~a~Wi~tTSallLgvPl~l~i 112 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSLFSF--SG-----------KALWIVTTSALLLGVPLALEI 112 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHHHh--cc-----------hhHHHHHHHHHHHHHHHHHHH
Confidence 3468889999999888777665554444333 11 455555555555555444433
No 305
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=56.98 E-value=1.4e+02 Score=30.78 Aligned_cols=51 Identities=12% Similarity=0.105 Sum_probs=32.6
Q ss_pred cccccccc----cchhHHHHHHhHHHHHh-hh-hcccchhHHHHHHHHHHHHHHhhh
Q psy10432 69 VVGSIADK----FGRKLICISYGIVYTLC-CL-TKFSSDFYILLYGRLFGGIATSIL 119 (440)
Q Consensus 69 ~~G~l~Dr----~Grr~~l~~~~~~~~~~-~~-~~~~~~~~~l~~~r~l~G~~~~~~ 119 (440)
+++-++|. -||.+-++++..+++++ +. ....+..+.+...-++.+++.+..
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 34445553 35667788888888887 43 444556666666667777766665
No 306
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=50.93 E-value=1.7e+02 Score=26.09 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=19.7
Q ss_pred HHhHHHHHh-h-hhcccchhHHHHHHHHHHHHHHhhh
Q psy10432 85 SYGIVYTLC-C-LTKFSSDFYILLYGRLFGGIATSIL 119 (440)
Q Consensus 85 ~~~~~~~~~-~-~~~~~~~~~~l~~~r~l~G~~~~~~ 119 (440)
.+.++++++ . .....++.+.+.+.-++.+++.++.
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 344445444 3 3344455666666667777766665
No 307
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=50.56 E-value=2.3e+02 Score=26.86 Aligned_cols=27 Identities=22% Similarity=-0.077 Sum_probs=16.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 141 WLNLTFARATFGSGLFAIVSGFTAHFF 167 (440)
Q Consensus 141 ~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (440)
||.+...+.....-.+.++=|+++-+.
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~ 134 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWV 134 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHH
T ss_pred ceeeehHHHHHHHHHhhhhccccceEE
Confidence 566666666666666666666665444
No 308
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=49.36 E-value=56 Score=23.45 Aligned_cols=21 Identities=14% Similarity=0.319 Sum_probs=11.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHH
Q psy10432 390 AIHSVFVVCTACLLVALLASC 410 (440)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~ 410 (440)
.|-.+|.+.+++.+.+.....
T Consensus 51 QWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 51 QWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 334455566666665554443
No 309
>PRK15015 carbon starvation protein A; Provisional
Probab=49.33 E-value=3e+02 Score=27.89 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=21.2
Q ss_pred ccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhccc
Q psy10432 135 YLFPVEWLNLTFARA-TFGSGLFAIVSGFTAHFFADILNL 173 (440)
Q Consensus 135 ~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw 173 (440)
|+.|.++ -..+|-. .+..+.|.++||.++. .+||
T Consensus 79 DYvPt~k-~VLfGHHFasIAGAGPivGPvlAa----~~Gw 113 (701)
T PRK15015 79 DYVPTDK-KVLFGHHFAAIAGAGPLVGPVLAA----QMGY 113 (701)
T ss_pred CcCcCCc-cchhHHHHHHHhccCccHHHHHHH----HHcc
Confidence 5555544 4556654 5556677777777764 4788
No 310
>KOG3810|consensus
Probab=46.74 E-value=79 Score=29.14 Aligned_cols=92 Identities=10% Similarity=-0.004 Sum_probs=62.4
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH--h-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccc
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL--C-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEH 131 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~--~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 131 (440)
.=.+..+.+.+.++..|.+--++.|..-++++..-... . ..+..+++.|..+++.++...-.....+....-++
T Consensus 276 veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA--- 352 (433)
T KOG3810|consen 276 VEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA--- 352 (433)
T ss_pred HHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH---
Confidence 45556666666667899998888776544443332222 2 36777889999888888887777776555444555
Q ss_pred cccccccchhhhHHHHHHHHH
Q psy10432 132 LNYYLFPVEWLNLTFARATFG 152 (440)
Q Consensus 132 ~~~~~~~~~~r~~~~~~~~~~ 152 (440)
+..++|.-|..+|+....
T Consensus 353 ---~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 353 ---RNLSSELFGLVFGINTFV 370 (433)
T ss_pred ---HhhhhhhheeeeehHHHH
Confidence 777777778888776553
No 311
>PRK02237 hypothetical protein; Provisional
Probab=46.10 E-value=1.2e+02 Score=22.33 Aligned_cols=47 Identities=13% Similarity=0.256 Sum_probs=37.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHH
Q psy10432 258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITV 305 (440)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 305 (440)
...|-.++.++-..++.+++.++..|+ ..+.+-=.++..++.++...
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg-~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDG-VRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcC-cCCChhHHHhHHHHHHhHHH
Confidence 447889999999999999999999997 88777766676666665533
No 312
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=45.46 E-value=70 Score=24.83 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=21.6
Q ss_pred HhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432 346 LRGRIIPEKARATITNWLRVPTNFITCFTLI 376 (440)
Q Consensus 346 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 376 (440)
-+.+++|+..|..+.+..+............
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~ks~~sf 87 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFVKSTLSF 87 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567889999999888777766555444433
No 313
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=44.14 E-value=33 Score=25.90 Aligned_cols=10 Identities=40% Similarity=0.551 Sum_probs=4.7
Q ss_pred HHHHHHHhhh
Q psy10432 405 ALLASCVFKR 414 (440)
Q Consensus 405 ~~~~~~~~~~ 414 (440)
.+++.++++|
T Consensus 81 Illi~y~irR 90 (122)
T PF01102_consen 81 ILLISYCIRR 90 (122)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344455555
No 314
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=43.45 E-value=23 Score=30.01 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=54.9
Q ss_pred ccccccccccchhHH--------HHHHhHHHHHh--hhhcccc--hhHHHHHHHHHHHHHHhhhccccchhhhccccccc
Q psy10432 68 IVVGSIADKFGRKLI--------CISYGIVYTLC--CLTKFSS--DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYY 135 (440)
Q Consensus 68 ~~~G~l~Dr~Grr~~--------l~~~~~~~~~~--~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 135 (440)
|=.+.++||||-+-. ++.|.++-++. ++..+.. +.-.=...-.-.|+|.+....++.+-+. +
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~------~ 198 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALA------A 198 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHH------H
Confidence 778899999985432 44455544443 2222111 2222244456678888888776666666 7
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 136 LFPVEWLNLTFARATFGSGLFAIVSGFTAHFF 167 (440)
Q Consensus 136 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 167 (440)
.+| +......++-...+-+..+.|-...-++
T Consensus 199 ~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 199 AYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 775 5666677766666666666655544443
No 315
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=42.70 E-value=2.4e+02 Score=24.85 Aligned_cols=65 Identities=12% Similarity=0.206 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhhh-ccccccccc-cchhHHHH----HHhHHHHHhhhhc--cc--c--hhHHHHHHHHHHHHHHhhh
Q psy10432 55 LYIAGFASSMIFG-IVVGSIADK-FGRKLICI----SYGIVYTLCCLTK--FS--S--DFYILLYGRLFGGIATSIL 119 (440)
Q Consensus 55 ~~~~~~~~~~l~~-~~~G~l~Dr-~Grr~~l~----~~~~~~~~~~~~~--~~--~--~~~~l~~~r~l~G~~~~~~ 119 (440)
.+.+-+..+.+.+ ...|.+... +.||+.+. .+.++..++.++. .. + ++..+++.-++.|.+.=..
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI 221 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 4444444444443 367777763 45555433 2344444442222 22 1 3556677777777765333
No 316
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=41.24 E-value=2.9e+02 Score=25.47 Aligned_cols=65 Identities=11% Similarity=0.068 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH-h---hhhcccchhHHHHHHHHHHHHHHhhh
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL-C---CLTKFSSDFYILLYGRLFGGIATSIL 119 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~---~~~~~~~~~~~l~~~r~l~G~~~~~~ 119 (440)
++.+.-....+.+|+.+++.+++|--+.+..+.++-.= + +...+++|......+-.+.|.-.|..
T Consensus 51 I~~laP~la~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~T 119 (354)
T PF04346_consen 51 IMALAPVLAAFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGAT 119 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhccc
Confidence 56666667778889999999999999988877665432 2 24556666666666655555555543
No 317
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=30.82 E-value=3.9e+02 Score=23.87 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q psy10432 105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPI 176 (440)
Q Consensus 105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 176 (440)
--..|.+.|+-.-.+.| +.++++-.+|++++-...--.....+++..+-|++ |++.+...|+-+
T Consensus 22 ~~~lr~~~g~~~vlf~P-------Gy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~-g~~l~~~~~~i~ 85 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLP-------GYALVAALFPRKHDLDGIERLALSVGLSIAIVPLI-GLLLNYTPWGIR 85 (287)
T ss_pred hhHHHHHHHHHHHHHhc-------cHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHhccCCcc
Confidence 45567777776655433 23333366665433322222233333344444444 455555555434
No 318
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=30.45 E-value=1.3e+02 Score=23.93 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=32.7
Q ss_pred chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHH
Q psy10432 100 SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIV 159 (440)
Q Consensus 100 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (440)
+++..++..-.+.|+|.-+. .+..+. ..+++++-|..+|+-..-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gllGi---sYGilS------aSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGI---SYGILS------ASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHHhh---hhhhcc------cccCCCCCCCcccHHHHHHhHHHHH
Confidence 45555666666666655433 112233 7778888999999988887776543
No 319
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=29.72 E-value=15 Score=33.23 Aligned_cols=61 Identities=10% Similarity=-0.068 Sum_probs=2.2
Q ss_pred chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432 100 SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHF 166 (440)
Q Consensus 100 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 166 (440)
+|-+..++..++.|+..|-..+....+.. +..++++|..+-.+.......|..+|..++-.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p------~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAP------KSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ---------------------HHHH------------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCC------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466677889999999988665555555 88888899888888888888888888776543
No 320
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=29.02 E-value=5.7e+02 Score=25.18 Aligned_cols=31 Identities=3% Similarity=-0.048 Sum_probs=18.5
Q ss_pred ccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432 348 GRIIPEKARATITNWLRVPTNFITCFTLIFI 378 (440)
Q Consensus 348 ~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 378 (440)
-....+++++-+........+.|-+++-..+
T Consensus 144 LT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 144 LTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 3344567776666655566666666665544
No 321
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=28.26 E-value=1.5e+02 Score=18.41 Aligned_cols=25 Identities=12% Similarity=0.171 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHhhccCCchhHH
Q psy10432 269 ISIMIGSKIYSILILKYFKPETMLT 293 (440)
Q Consensus 269 ~~~~~~~~~~g~l~~r~~~~~~~~~ 293 (440)
+..++.....|+..|++++..+...
T Consensus 11 ~~~i~~g~~~G~~lD~~~~t~p~~~ 35 (55)
T PF09527_consen 11 AAPILVGFFLGYWLDKWFGTSPWFT 35 (55)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHH
Confidence 4455566778888887566644433
No 322
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=27.18 E-value=1.2e+02 Score=16.75 Aligned_cols=20 Identities=25% Similarity=0.182 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy10432 265 SCFMISIMIGSKIYSILILK 284 (440)
Q Consensus 265 ~~~~~~~~~~~~~~g~l~~r 284 (440)
+...+++++.+.+.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 45667778888888888664
No 323
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=24.44 E-value=2.2e+02 Score=18.83 Aligned_cols=17 Identities=18% Similarity=0.151 Sum_probs=8.8
Q ss_pred HHHHHHHhccccCCCCC
Q psy10432 189 STLFIYFCWEEHYDPKT 205 (440)
Q Consensus 189 ~~~~~~~~~~e~~~~~~ 205 (440)
..-.+-..+||+.++..
T Consensus 44 ~~~~iG~~LPe~s~~aP 60 (67)
T PF11511_consen 44 ALYFIGLLLPERSRQAP 60 (67)
T ss_dssp HHHHHHHSSTTTCSS-S
T ss_pred HHHHHHHhCchhcccCC
Confidence 33344456788755443
No 324
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=24.14 E-value=4.6e+02 Score=22.46 Aligned_cols=51 Identities=14% Similarity=0.309 Sum_probs=27.2
Q ss_pred hhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI 303 (440)
Q Consensus 249 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 303 (440)
..|..+..+.+.|..........+ +....+.|| .+.++....+.....++.
T Consensus 122 ~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~-~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 122 LAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRR-LKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHH-hcCCCchHHHHHHHHHHH
Confidence 455555555566655543333333 555566665 665555555555544443
No 325
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=21.91 E-value=6.5e+02 Score=23.39 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=42.2
Q ss_pred HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH-h---hhhcccchhHHHHHHHHHHHHHHhh
Q psy10432 55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL-C---CLTKFSSDFYILLYGRLFGGIATSI 118 (440)
Q Consensus 55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~---~~~~~~~~~~~l~~~r~l~G~~~~~ 118 (440)
++++.-....+..|+.+++.+..|.-+.+..+.++..= + +...++.|......+-.+.|--.|.
T Consensus 52 I~~laP~ls~~l~~ii~Pi~~~lgaDpsmfa~siLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~ 119 (372)
T PRK15086 52 IMALAPVLAHVLGPVIIPIYEALGADPSMFATTLLAVDMGGYQLAKELAGDPEAWLFSGLILGSMMGA 119 (372)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHhcCcCHHHHHHHhcChhhHHHHHHHHHHhccc
Confidence 56667777777888999999999998888776665431 2 2344555665555555555554444
No 326
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=20.45 E-value=2.3e+02 Score=22.51 Aligned_cols=27 Identities=7% Similarity=0.177 Sum_probs=18.6
Q ss_pred hccCCcchhhHHHHHHhhhhhhhHHHH
Q psy10432 347 RGRIIPEKARATITNWLRVPTNFITCF 373 (440)
Q Consensus 347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~ 373 (440)
++..-+++..|...|+-.+-.|++...
T Consensus 119 lSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 119 LSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred cccccCCCCCCCcccHHHHHHhHHHHH
Confidence 333346677888888888877776554
No 327
>PRK11111 hypothetical protein; Provisional
Probab=20.38 E-value=5.4e+02 Score=21.85 Aligned_cols=52 Identities=19% Similarity=0.250 Sum_probs=28.7
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432 135 YLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187 (440)
Q Consensus 135 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~ 187 (440)
+-.++++|.+..-.......+-.++....|.++.+.+|-+ ...|-+++.+.+
T Consensus 35 ~~~s~~~r~~ia~~a~l~a~~ill~f~~~G~~iL~~fGIs-l~afrIaGGiiL 86 (214)
T PRK11111 35 SHQTAAERNKTNLTANLSVAIILLISLFLGDFILNLFGIS-IDSFRIAGGILV 86 (214)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHH
Confidence 4445555554443333334444556667788888888872 234444444443
Done!