RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10434
(593 letters)
>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 492
Score = 275 bits (704), Expect = 1e-86
Identities = 196/542 (36%), Positives = 278/542 (51%), Gaps = 57/542 (10%)
Query: 28 KKPHIIIILADDLGWNDVSFHGSSQIPTPNIDALAYNGLILNQHYVQALCTPSRSALMTG 87
+ PH++ +LADDLGWNDV FHGS +I TP++DALA G++L+ +Y Q L TPSRS L+TG
Sbjct: 2 RPPHLVFLLADDLGWNDVGFHGS-RIRTPHLDALAAGGVLLDNYYTQPLATPSRSQLLTG 60
Query: 88 KYPIHIGMQHGVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFREVYTPTFRG 147
+Y I G+QH +I +P +PL EKLLPQ LKEAGY TH +GKWHLG +R+ PT RG
Sbjct: 61 RYQIRTGLQHQIIWPCQPSCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRKECLPTRRG 120
Query: 148 FDSHYGYWQGLQDYYDHSCKATFEPYQ----GLDMRHNMQVDNKTIGIYSTDLYTEAAIN 203
FD+++GY G +DYY H + LD R +V +YST+++T+ AI
Sbjct: 121 FDTYFGYLLGSEDYYSHERCTLIDALNVTRCALDFRDGEEVATGYKNMYSTNIFTKRAIA 180
Query: 204 VIAEHNKSKPMFLYLAHLAVHAGNTYEPFQAPDEEVAKFLDISDPERRTYAGMVSRLDES 263
+I H KP+FLYLA +VH EP Q P+E + + I D R YAGMVS +DE+
Sbjct: 181 LITNHPPEKPLFLYLALQSVH-----EPLQVPEEYLKPYDFIQDKNRHHYAGMVSLMDEA 235
Query: 264 VGNVIAALRKHGMLENSIVLFMADNGAPSFGIHSNKGSNHPLRGMKSTPWDGGMRGVAAI 323
VGNV AAL+ G+ N++ +F DN G G+N PLRG K + W+GG+RGV +
Sbjct: 236 VGNVTAALKSSGLWNNTVFIFSTDN----GGQTLAGGNNWPLRGRKWSLWEGGVRGVGFV 291
Query: 324 WSPWLKQTQKVSSELFHISDWLPTLCAAAGIEINDTS-LDGVNQWDVLTKGAKTKRSEIL 382
SP LKQ + EL HISDWLPTL A N T LDG + W +++G+ + R E+L
Sbjct: 292 ASPLLKQKGVKNRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWKTISEGSPSPRIELL 351
Query: 383 HNIDNVDNPQKYYAALRVDDLKYVAGTDNNGQSDEWYGDTDNEIDKYSPKEVLYSKAGIT 442
HNID + + + + + I + K +
Sbjct: 352 HNIDPNFVDSSPC---PRNSMAPAKDDSSLPEYSAFNTSVHAAIRHGNWKLLTGYPGCGY 408
Query: 443 FNALKTKLQIKQKHAADPKANSSDALRTILTDEKILELREFARVRCNYDNKGAHCNSTVK 502
+ ++ + + ++DP
Sbjct: 409 WFPPPSQYNVSEIPSSDPPTK--------------------------------------T 430
Query: 503 PCLFNITDDPCEQNNLAESQTDLLKQLEDKLAIYKSTMVPPGNKPFDKRADPARWNNIWV 562
LF+I DP E+++L+ ++ +L +L Y VP D R DP + +W
Sbjct: 431 LWLFDIDRDPEERHDLSREYPHIVTKLLSRLQFYHKHSVPVYFPAQDPRCDP-KATGVWG 489
Query: 563 PW 564
PW
Sbjct: 490 PW 491
>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens) [TaxId:
9606]}
Length = 485
Score = 192 bits (487), Expect = 3e-55
Identities = 111/409 (27%), Positives = 167/409 (40%), Gaps = 6/409 (1%)
Query: 28 KKPHIIIILADDLGWNDVSFHGSSQIPTPNIDALAYNGLILNQHYVQA-LCTPSRSALMT 86
+ P+I++I ADDLG+ D+ +G TPN+D LA GL YV L TPSR+AL+T
Sbjct: 1 RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLGTPSRAALLT 60
Query: 87 GKYPIHIGMQHGVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFRE-VYTPTF 145
G+ P+ +GM GV++ GLPL E + + L GY T GKWHLG E + P
Sbjct: 61 GRLPVRMGMYPGVLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPEGAFLPPH 120
Query: 146 RGFDSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYSTDLYTEAAINVI 205
+GF G + V + S + +
Sbjct: 121 QGFHRFLGIPYSHDQGPCQNLTCFPPATPCDGGCDQGLVPIPLLANLSVEAQPPWLPGLE 180
Query: 206 AEHNKSKPMFLYLAHLAVHAGNTYEPFQA-PDEEVAKFLDISDPERRTYAGMVSRLDESV 264
A + + A Y + + R + + LD +V
Sbjct: 181 ARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAV 240
Query: 265 GNVIAALRKHGMLENSIVLFMADNGAPSFGIHSNKGSNHPLRGMKSTPWDGGMRGVAAIW 324
G ++ A+ G+LE ++V+F ADNG P S G + LR K T ++GG+R A +
Sbjct: 241 GTLMTAIGDLGLLEETLVIFTADNG-PETMRMSRGGCSGLLRCGKGTTYEGGVREPALAF 299
Query: 325 SPWLKQTQKVSSELFHISDWLPTLCAAAGIEINDTSLDGVNQWDVLTKGAKTKRSEILHN 384
P V+ EL D LPTL A AG + + +LDG + +L K+ R +
Sbjct: 300 WPG-HIAPGVTHELASSLDLLPTLAALAGAPLPNVTLDGFDLSPLLLGTGKSPRQSLFFY 358
Query: 385 IDNVDNPQKYYAALRVDDLKYVAGTDNNGQSDEWYGDTDNEIDKYSPKE 433
D + + A+R K T + SD + + E
Sbjct: 359 PSYPDEVRGVF-AVRTGKYKAHFFTQGSAHSDTTADPACHASSSLTAHE 406
Score = 41.3 bits (95), Expect = 3e-04
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 8/61 (13%)
Query: 502 KPCLFNITDDPCEQNNLAESQTD-------LLKQLEDKLAIYKSTMVPPGNKPFDKRADP 554
P L++++ DP E NL LKQL+ A + + G + DP
Sbjct: 407 PPLLYDLSKDPGENYNLLGGVAGATPEVLQALKQLQLLKAQLDAAV-TFGPSQVARGEDP 465
Query: 555 A 555
A
Sbjct: 466 A 466
>d1hdha_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 525
Score = 176 bits (446), Expect = 4e-49
Identities = 118/498 (23%), Positives = 179/498 (35%), Gaps = 107/498 (21%)
Query: 28 KKPHIIIILADDLGWNDVSFHGSSQIPTPNIDALAYNGLILNQHYVQALCTPSRSALMTG 87
K+P+ ++I+ADDLG++D+ G +I TPN+DALA GL L + + +P+RS L+TG
Sbjct: 1 KRPNFLVIVADDLGFSDIGAFGG-EIATPNLDALAIAGLRLTDFHTASTGSPTRSMLLTG 59
Query: 88 KYPIHIGMQH--------GVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFRE 139
G+ G L LP+ L+EAGY T GKWHL +
Sbjct: 60 TDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHL-GLKP 118
Query: 140 VYTPTFRGFDSHYGYWQGLQDY------YDHSCKATFEPYQGLDMRHNMQVDNKTIGIYS 193
TP RGF+ + G ++ YD S + L + +D G YS
Sbjct: 119 EQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYS 178
Query: 194 TDLYTEAAINVIAEHNKSKPMFLYLAHLAV-------------HAGNTYEPFQAPDEEVA 240
+D + + + + E ++S+P F YL A + G +A +E
Sbjct: 179 SDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERL 238
Query: 241 KFL------------------------------DISDPERRTYAGMVSRLDESVGNVIAA 270
L S YA MV R+D ++G V+
Sbjct: 239 ARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDY 298
Query: 271 LRKHGMLENSIVLFMADNGA------------------------------------PSFG 294
LR+ G L+N+ VLFM+DNGA +G
Sbjct: 299 LRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYG 358
Query: 295 IHSNKGSNHPLRGMKSTPWDGGMRGVAAIWSPWLKQTQKVSSELFHISDWLPTLCAAAGI 354
+ + P R K+ GG+R A + P L + +S + D PTL AG+
Sbjct: 359 PRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGV 418
Query: 355 EINDTS--------LDGVNQWDVLTKGAKTKRSEILHNIDNVDNPQKYYAALRVDDLKYV 406
G + L+ + E + A+R D K V
Sbjct: 419 RHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWELFG----MRAIRQGDWKAV 474
Query: 407 AGTDNNGQSDEWYGDTDN 424
G + D
Sbjct: 475 YLPAPVGPATWQLYDLAR 492
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 553
Score = 174 bits (440), Expect = 5e-48
Identities = 109/568 (19%), Positives = 183/568 (32%), Gaps = 61/568 (10%)
Query: 26 APKKPHIIIILADDLGWNDVSFHGSSQIPTPNIDALAYNGLILNQHYVQA-LCTPSRSAL 84
A +P+II+++ADDLG D +G+ I TPNID LA G+ L QH + L TPSR+A
Sbjct: 1 AASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLATPSRAAF 60
Query: 85 MTGKYPIHIGMQH-----GVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHL----- 134
MTG+YP+ GM + GLP E + LK+ GY+T IGKWHL
Sbjct: 61 MTGRYPVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCH 120
Query: 135 GFFREVYTPTFRGFDSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYST 194
+ P GF+ YG + F ++ + I
Sbjct: 121 SKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTT-------GFKRLVFLPLQIVGV 173
Query: 195 DLYTEAAINVIAEHNKSKPMFLYLAHLAVHAGNTYEPFQAPDEEVAKFLDISDPERRTYA 254
L T AA+N + + +F L LA + F + F+ + +
Sbjct: 174 TLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQPM 233
Query: 255 GMVSRLDESVGNVIAALRKHGMLENSIVLFMADNGAPSFGIHSNKGSNHPLRGMKSTPWD 314
+ ++++ +VL F G + +
Sbjct: 234 SYDNLTQRLTVEAAQFIQRNTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEM 293
Query: 315 GGMRGVAAIWSPWLKQTQKVSSELFHISDWLPTLCAAAGIEINDTSLDGVNQWDVLTKGA 374
G L + + L + + T A +E + + + + KG
Sbjct: 294 DWSVG---QILNLLDELR-----LANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGG 345
Query: 375 KTKRSEILHNIDNVDNPQKYYAALRVDDLKYVAGTDNNGQSDEWYGDTDNEI-------- 426
K E + + + A + D + +
Sbjct: 346 KANNWEGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDLM 405
Query: 427 ------DKYSPKEVLYSKAGITFNALKTKLQIKQKHAADPKANSSDALRTILTDEKILEL 480
+ S E L+ NA++ Q T
Sbjct: 406 PLLEGKSQRSDHEFLFHYCNAYLNAVRWHPQNSTS----------IWKAFFFTPNFNPVG 455
Query: 481 REFARVRCNYDNKGAHCNSTVKPCLFNITDDPCEQNNLAESQ----TDLLKQLEDKLAIY 536
G++ P LF+I+ DP E+N L + ++LK +++ +
Sbjct: 456 SNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRERNPLTPASEPRFYEILKVMQEAADRH 515
Query: 537 KSTMVPPGNKPFDKRADPARWNNIWVPW 564
T+ + + N +W PW
Sbjct: 516 TQTLPEVPD-------QFSWNNFLWKPW 536
>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB
{Streptococcus mutans [TaxId: 1309]}
Length = 283
Score = 81.9 bits (201), Expect = 7e-18
Identities = 39/332 (11%), Positives = 83/332 (25%), Gaps = 65/332 (19%)
Query: 31 HIIIILADDLGWN---DVSFHGSSQIPTPNIDALAYNGLILNQHYVQALCTPSRSALMTG 87
I +++ D +G D + ++ +P D L + L P+ + + G
Sbjct: 5 RIHLVVLDSVGIGAAPDANNFSNAGVPDGASDTLG------HISKTVGLNVPNMAKIGLG 58
Query: 88 KYPIHIGMQHGVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFREVYTPTFRG 147
P ++ P T + G T G W + F
Sbjct: 59 NIPRDTPLKTV------PAENHPTGYVTKLEEVSLGKDT-MTGHWEIMGLNITEPSPFAP 111
Query: 148 FDSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYSTDLYTEAAINVIAE 207
+ G+ Y F + + + ++ + I +
Sbjct: 112 TVLNKLADAGVSTYAVGKINDIFNGSGITNDMGHNKSNSH---------GVDTLIKTMGL 162
Query: 208 HNKSKPMFLYLAHLAVHAGNTYEPFQAPDEEVAKFLDISDPERRTYAGMVSRLDESVGNV 267
F + + A + Y + DE + +
Sbjct: 163 S-AFTKGFSFTNLVDFDALYGH-----------------RRNAHGYRDCLHEFDERLPEI 204
Query: 268 IAALRKHGMLENSIVLFMADNGAPSFGIHSNKGSNHPLRGMKSTPWDGGMRGVAAIWSPW 327
IAA++ +L + A ++ + P +SP
Sbjct: 205 IAAMKVDDLLLITADHGNDPTYA-----GTDHTREY-------VPL--------LAYSPS 244
Query: 328 LKQTQKVSSELFHISDWLPTLCAAAGIEINDT 359
+ H +D T+ G++
Sbjct: 245 FT--GNGVLPVGHYADISATIADNFGVDTAMI 274
>d1o98a2 c.76.1.3 (A:2-76,A:311-510)
2,3-Bisphosphoglycerate-independent phosphoglycerate
mutase, catalytic domain {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 275
Score = 72.4 bits (176), Expect = 1e-14
Identities = 40/330 (12%), Positives = 64/330 (19%), Gaps = 68/330 (20%)
Query: 28 KKPHIIIILADDLGWNDVSFHGS-SQIPTPNIDALAYNGLILNQHYVQALCTPSRSALMT 86
KKP +IIL D D ++ + +Q PN D T
Sbjct: 2 KKPVALIIL-DGFALRDETYGNAVAQANKPNFDRYWNEY---------PHTTLKACGEAV 51
Query: 87 GKYPIHIGMQHGVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFREVYTPTFR 146
G +G + + G G L E
Sbjct: 52 GLPEGQMGNSEV-----GHLNIGAGRIVYTNLDNTIGEVLSQHGLRQLRIA-ETEKYPHV 105
Query: 147 GFDSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYSTDLYTEAAINVIA 206
F G + + P L +
Sbjct: 106 TFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVT-------------------- 145
Query: 207 EHNKSKPMFLYLAHLAVHAGNTYEPFQAPDEEVAKFLDISDPERRTYAGMVSRLDESVGN 266
L A + PD + V +DE +G
Sbjct: 146 -------DALLKEIEADKYDAIILNYANPDMVGHSG------KLEPTIKAVEAVDECLGK 192
Query: 267 VIAALRKHGMLENSIVLFMADNGAPSFGIHSNKGSNHPLRGMKSTPWDGGMRGVAAIWSP 326
V+ A+ G + + K +
Sbjct: 193 VVDAILAKGGIAIITADHGNADE-------------VLTPDGKPQTAHTTNPVPVIVTKK 239
Query: 327 WLKQTQKVSSELFHISDWLPTLCAAAGIEI 356
+K + D PT+ G+
Sbjct: 240 GIKLRDGGI-----LGDLAPTMLDLLGLPQ 264
>d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas
fluorescens [TaxId: 294]}
Length = 406
Score = 64.1 bits (154), Expect = 1e-11
Identities = 21/206 (10%), Positives = 49/206 (23%), Gaps = 11/206 (5%)
Query: 27 PKKPHIIIILADDLGWNDVSFHGSSQIPTPNIDALAYNGLILNQHYVQ-ALCTPSRSALM 85
P I+I D + P + L G +L V + P+ +++
Sbjct: 14 SSAP-TIVICVDGCEQ-EYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIV 71
Query: 86 TGKYPIHIGMQHGVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFREVYTPTF 145
TG P G+ + T++ + + A + +
Sbjct: 72 TGAPPSVHGICGN------FFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAK 125
Query: 146 RGFDSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYSTDLYTEAAINVI 205
+ G+ + G++ + A +
Sbjct: 126 DKLRNLLGHQLKGICFSAEKADQVNLEEHGVENILARVGMPVPSVYSADLSEFVFAAGLS 185
Query: 206 AEHNKSKPMFLYLAHLAVHAGNTYEP 231
N+ + + + P
Sbjct: 186 LLTNERPDFMYLSTT--DYVQHKHAP 209
>d1kjna_ c.115.1.1 (A:) Hypothetical protein MTH777 (MT0777)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 31.7 bits (72), Expect = 0.100
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 213 PMFLYLAHLAVHAGNTYEPFQAPDEEVAKFLDISDPERRTYAGMVSRLDESVGNVIAA 270
P+ +Y +H G + + + + ++DPE MV L+ + +
Sbjct: 18 PLAIYTSHKLKKKG--FRVTVTANPAALRLVQVADPEGIYTDEMVD-LESCINELAEG 72
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 31.2 bits (69), Expect = 0.31
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 7/107 (6%)
Query: 65 GLILNQHYVQALCTPSRSALMTGKYPIHIGMQHGVILEGEPWGLPLTEKLLPQYLKEAGY 124
G IL + S + G+ P+ +QHG++ W L L L +AGY
Sbjct: 37 GYILGIDRIPYGRKNSEN---IGRRPVAF-LQHGLLASATNWISNLPNNSLAFILADAGY 92
Query: 125 ATHAIGKWHLGFFREVYTPTFRGFDSHYGYWQGLQDYYDHSCKATFE 171
+ + DS + + + AT +
Sbjct: 93 DVWL---GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATID 136
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168
{Thermus thermophilus [TaxId: 274]}
Length = 534
Score = 31.4 bits (70), Expect = 0.36
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Query: 235 PDEEVAKFLDISDPERRTYAGMVSRLDESVGNVIAALRKHGMLENSIVLFMADNGA 290
+EV L + R TYA + + ++ LR G+ V + N
Sbjct: 25 GRKEVVSRLHTGEVHRTTYA----EVYQRARRLMGGLRALGVGVGDRVATLGFNHF 76
>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId:
301298]}
Length = 332
Score = 30.7 bits (68), Expect = 0.45
Identities = 25/282 (8%), Positives = 67/282 (23%), Gaps = 18/282 (6%)
Query: 33 IIILADDLGWNDVSFHGSSQIPTPNIDALAYNGLILNQHYVQALCTPSRSALMTGKYPIH 92
A D FH + + + + ++ +
Sbjct: 56 WHEKARGKAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKVFMAYKNVFQADDETLF 115
Query: 93 IGMQ----HGVILEGEPWGLPLTEKLLPQYLKEAGYATHAIGKWHLGFFREVYTPTFRGF 148
+ G +++ + + L + L E T
Sbjct: 116 KTLVKAKELGALVQVHAENGDVLDYLTKKALAEGNTDPIYHAYTRPPEAEGEATGRAIAL 175
Query: 149 DSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYSTDLYTEAAINVIA-- 206
+ G + S + + + + + + +
Sbjct: 176 TALAGSQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQYLALDVSIMDQPDFEGAKYVW 235
Query: 207 ------EHNKSKPMFLYLAHLAVHAGNTYEPFQAPDEEVAKFLDISDPERRTYAGMVSRL 260
+ N+ + G+ + PF ++ D + G +
Sbjct: 236 SPPLREKWNQEVLWSALKNGILQTVGSDHCPFNFRGQKELGRGDFTKIP----NGGPL-I 290
Query: 261 DESVGNVIAALRKHGMLE-NSIVLFMADNGAPSFGIHSNKGS 301
++ + + + + G + N V + A FG+ KG+
Sbjct: 291 EDRLTILYSEGVRQGRISLNQFVDISSTKAAKLFGMFPRKGT 332
>d1ciya2 b.77.2.1 (A:256-461) delta-Endotoxin (insectocide), middle
domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Length = 206
Score = 27.7 bits (61), Expect = 3.6
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Query: 139 EVYTPTFRGFDSHYGYWQGLQDYYDHSCKATFEPYQGLDMRHNMQVDNKTIGIYSTDLY 197
+YT RGF+ YW G Q + E L + + ++
Sbjct: 49 TIYTDVHRGFN----YWSGHQITASPVGFSGPEFAFPLFGNAGNAAPPVLVSLTGLGIF 103
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin
synthetase 1 {Bacillus brevis [TaxId: 1393]}
Length = 514
Score = 27.9 bits (61), Expect = 4.2
Identities = 7/46 (15%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 245 ISDPERRTYAGMVSRLDESVGNVIAALRKHGMLENSIVLFMADNGA 290
+ + E+ TY L+ + + G+ ++++V M +
Sbjct: 43 VCENEQLTYH----ELNVKANQLARIFIEKGIGKDTLVGIMMEKSI 84
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis)
[TaxId: 7054]}
Length = 541
Score = 27.6 bits (60), Expect = 4.8
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 242 FLDISDPERRTYAGMVSRLDESVGNVIAALRKHGMLENSIVLFMADNGA 290
F D TYA E + A++++G+ N ++ ++N
Sbjct: 39 FTDAHIEVNITYA----EYFEMSVRLAEAMKRYGLNTNHRIVVCSENSL 83
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus
subtilis [TaxId: 1423]}
Length = 536
Score = 26.9 bits (58), Expect = 9.1
Identities = 8/46 (17%), Positives = 14/46 (30%), Gaps = 4/46 (8%)
Query: 245 ISDPERRTYAGMVSRLDESVGNVIAALRKHGMLENSIVLFMADNGA 290
+Y LD + A +K G+ + V+ N
Sbjct: 45 TCGNTHWSYR----ELDTRADRLAAGFQKLGIQQKDRVVVQLPNIK 86
>d2q66a2 d.218.1.3 (A:5-201) Poly(A) polymerase, PAP, N-terminal
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 197
Score = 26.0 bits (57), Expect = 9.7
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 505 LFNITDDPCEQNNLAESQTDLLKQLEDK 532
+ D P +L S +LL+ L++K
Sbjct: 152 ICARLDQPQVPLSLTLSDKNLLRNLDEK 179
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.420
Gapped
Lambda K H
0.267 0.0419 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,306,913
Number of extensions: 110608
Number of successful extensions: 312
Number of sequences better than 10.0: 1
Number of HSP's gapped: 294
Number of HSP's successfully gapped: 30
Length of query: 593
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 503
Effective length of database: 1,171,896
Effective search space: 589463688
Effective search space used: 589463688
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.1 bits)