BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10436
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D4D4|TKTL2_MOUSE Transketolase-like protein 2 OS=Mus musculus GN=Tktl2 PE=2 SV=1
Length = 627
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 129/222 (58%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNL-----VSDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI IQ ++NL + D+P++ +SN K++S P YK G+++ATR AYG+ LAKL SN
Sbjct: 278 LIENRIQTNRNLTPKPPIEDSPRISMSNTKMTSLPVYKLGDMIATREAYGLALAKLGQSN 337
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
RVI LDGDTKNSTFS+ KK
Sbjct: 338 QRVIVLDGDTKNSTFSEVFKKE-------------------------------------- 359
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
+P+R+IECFIAEQN+V VA+G A R RT+ F IRMGA
Sbjct: 360 ----------HPERFIECFIAEQNMVSVALGCATRGRTIAFVSTFAAFLTRAFDQIRMGA 409
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
ISQTN+NFVGSHCGVS+GEDGPSQMALED+AMFR+IP C VF
Sbjct: 410 ISQTNINFVGSHCGVSVGEDGPSQMALEDLAMFRSIPNCTVF 451
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD-VLKAYPDR 134
+ L +AF +A+QVK KPTALIAKTFKG+ PN+ED E WHGKP+ AD ++K +R
Sbjct: 224 EALCQAFWKAAQVKNKPTALIAKTFKGRGIPNVEDAENWHGKPMPKDRADGIVKLIENR 282
>sp|P40142|TKT_MOUSE Transketolase OS=Mus musculus GN=Tkt PE=1 SV=1
Length = 623
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 120/203 (59%), Gaps = 62/203 (30%)
Query: 20 DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNSRVIALDGDTKNSTFSDKL 79
DAP VDI+NI++ +PPSYK G+ +ATR AYG+ LAKL ++ R+IALDGDTKNSTFS+
Sbjct: 292 DAPSVDIANIRMPTPPSYKVGDKIATRKAYGLALAKLGHASDRIIALDGDTKNSTFSELF 351
Query: 80 KKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVLKAYPDRYIECF 139
KK +PDR+IEC+
Sbjct: 352 KKE------------------------------------------------HPDRFIECY 363
Query: 140 IAEQNLVGVAIGAACRNRTVPF--------------IRMGAISQTNVNFVGSHCGVSIGE 185
IAEQN+V +A+G A R+RTVPF IRM AIS++N+N GSHCGVSIGE
Sbjct: 364 IAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGE 423
Query: 186 DGPSQMALEDIAMFRTIPACLVF 208
DGPSQMALED+AMFR++P VF
Sbjct: 424 DGPSQMALEDLAMFRSVPMSTVF 446
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF Q K +PTA+IAKTFKG+ IEDKE WHGKPL + A+
Sbjct: 222 EELCKAF---GQAKHQPTAIIAKTFKGRGITGIEDKEAWHGKPLPKNMAE 268
>sp|Q6B855|TKT_BOVIN Transketolase OS=Bos taurus GN=TKT PE=2 SV=1
Length = 623
Score = 184 bits (466), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 128/221 (57%), Gaps = 67/221 (30%)
Query: 7 IAVSIQPDKNLVS-----DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNS 61
I+ IQ K +++ DAP VDI+NI++ +PP+YK G+ +ATR AYG LAKL +++
Sbjct: 274 ISGQIQSKKKILATPPEEDAPSVDITNIRMPTPPNYKVGDKIATRKAYGQALAKLGHASN 333
Query: 62 RVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLG 121
R+IALDGDTKNSTFS+ KK
Sbjct: 334 RIIALDGDTKNSTFSELFKKE--------------------------------------- 354
Query: 122 SSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGAI 167
+PDR+IEC+IAEQN+V +A+G A R+RTVPF IRM AI
Sbjct: 355 ---------HPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFDQIRMAAI 405
Query: 168 SQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
S++N+N GSHCGVSIGEDGPSQMALED+AMFR+IP VF
Sbjct: 406 SESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSIPMSTVF 446
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF QVK +PTA+IAKTFKG+ IEDKE WHGKPL + AD
Sbjct: 222 EELCKAF---GQVKNQPTAIIAKTFKGRGITGIEDKESWHGKPLPKNMAD 268
>sp|P50137|TKT_RAT Transketolase OS=Rattus norvegicus GN=Tkt PE=1 SV=1
Length = 623
Score = 183 bits (465), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 120/203 (59%), Gaps = 62/203 (30%)
Query: 20 DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNSRVIALDGDTKNSTFSDKL 79
DAP VDI+NI++ +PP+YK G+ +ATR AYG+ LAKL ++ R+IALDGDTKNSTFS+
Sbjct: 292 DAPSVDIANIRMPTPPNYKVGDKIATRKAYGLALAKLGHASDRIIALDGDTKNSTFSELF 351
Query: 80 KKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVLKAYPDRYIECF 139
KK +PDR+IEC+
Sbjct: 352 KKE------------------------------------------------HPDRFIECY 363
Query: 140 IAEQNLVGVAIGAACRNRTVPF--------------IRMGAISQTNVNFVGSHCGVSIGE 185
IAEQN+V +A+G A R+RTVPF IRM AIS++N+N GSHCGVSIGE
Sbjct: 364 IAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGE 423
Query: 186 DGPSQMALEDIAMFRTIPACLVF 208
DGPSQMALED+AMFR++P VF
Sbjct: 424 DGPSQMALEDLAMFRSVPMSTVF 446
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF Q K +PTA+IAKTFKG+ IEDKE WHGKPL + A+
Sbjct: 222 EELCKAF---GQAKHQPTAIIAKTFKGRGITGIEDKEAWHGKPLPKNMAE 268
>sp|P29401|TKT_HUMAN Transketolase OS=Homo sapiens GN=TKT PE=1 SV=3
Length = 623
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 125/221 (56%), Gaps = 67/221 (30%)
Query: 7 IAVSIQPDKNLVS-----DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNS 61
I IQ K +++ DAP VDI+NI++ S PSYK G+ +ATR AYG LAKL ++
Sbjct: 274 IYSQIQSKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASD 333
Query: 62 RVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLG 121
R+IALDGDTKNSTFS+ KK
Sbjct: 334 RIIALDGDTKNSTFSEIFKKE--------------------------------------- 354
Query: 122 SSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGAI 167
+PDR+IEC+IAEQN+V +A+G A RNRTVPF IRM AI
Sbjct: 355 ---------HPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAI 405
Query: 168 SQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
S++N+N GSHCGVSIGEDGPSQMALED+AMFR++P VF
Sbjct: 406 SESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVF 446
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF Q K +PTA+IAKTFKG+ +EDKE WHGKPL + A+
Sbjct: 222 EELCKAF---GQAKHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAE 268
>sp|Q5R1W6|TKT_PANTR Transketolase OS=Pan troglodytes GN=TKT PE=2 SV=1
Length = 623
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 125/221 (56%), Gaps = 67/221 (30%)
Query: 7 IAVSIQPDKNLVS-----DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNS 61
I IQ K +++ DAP VDI+NI++ S PSYK G+ +ATR AYG LAKL ++
Sbjct: 274 IYSQIQSKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASD 333
Query: 62 RVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLG 121
R+IALDGDTKNSTFS+ KK
Sbjct: 334 RIIALDGDTKNSTFSEIFKKE--------------------------------------- 354
Query: 122 SSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGAI 167
+PDR+IEC+IAEQN+V +A+G A RNRTVPF IRM AI
Sbjct: 355 ---------HPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAI 405
Query: 168 SQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
S++N+N GSHCGVSIGEDGPSQMALED+AMFR++P VF
Sbjct: 406 SESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVF 446
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF Q K +PTA+IAKTFKG+ +E KE WHGKP + A+
Sbjct: 222 EELCKAF---GQAKHQPTAIIAKTFKGRGITGVEGKESWHGKPFPKNMAE 268
>sp|Q60HC7|TKT_MACFA Transketolase OS=Macaca fascicularis GN=TKT PE=2 SV=1
Length = 623
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 125/221 (56%), Gaps = 67/221 (30%)
Query: 7 IAVSIQPDKNLVS-----DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNS 61
I IQ K +++ DAP VDI+NI++ S PSYK G+ +ATR AYG LAKL ++
Sbjct: 274 IYSQIQSKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASD 333
Query: 62 RVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLG 121
R+IALDGDTKNSTFS+ KK
Sbjct: 334 RIIALDGDTKNSTFSEIFKKE--------------------------------------- 354
Query: 122 SSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGAI 167
+PDR+IEC+IAEQN+V +A+G A RNRTVPF IRM AI
Sbjct: 355 ---------HPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAI 405
Query: 168 SQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
S++N+N GSHCGVSIGEDGPSQMALED+AMFR++P VF
Sbjct: 406 SESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPMSTVF 446
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF Q K +PTA+IAKTFKG+ +EDKE WHGKPL + A+
Sbjct: 222 EELCKAF---GQAKHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAE 268
>sp|Q2NL26|TKTL1_BOVIN Transketolase-like protein 1 OS=Bos taurus GN=TKTL1 PE=2 SV=1
Length = 596
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 125/222 (56%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNL-----VSDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI I+ +K+L + D+P+++IS I+++SPP Y+ +++ATR A G+ LAKL +N
Sbjct: 247 LIESQIETNKSLEPKAPIEDSPQINISVIEMTSPPDYEISDVIATRKACGLALAKLGHAN 306
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
RVI LDGDTKNSTFSD K
Sbjct: 307 DRVIVLDGDTKNSTFSDIFK---------------------------------------- 326
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
+ +P+R+IECFIAEQN+V VA+G R RTV F IRMG
Sbjct: 327 --------REHPERFIECFIAEQNMVSVALGCVTRGRTVAFACTFAAFLTRAFDQIRMGG 378
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
ISQTN+N +GSHCGVSIGEDGPSQMALED+AMFR IP C +F
Sbjct: 379 ISQTNINLIGSHCGVSIGEDGPSQMALEDLAMFRAIPNCTIF 420
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVLKAYPDRYI 136
+ L + F +A+Q+K KPTA++AKTFKG+ P++ED E WHGKP+ AD + + I
Sbjct: 193 EALCQVFWQAAQMKNKPTAVVAKTFKGRGIPSVEDAENWHGKPMPKERADAIIKLIESQI 252
Query: 137 E 137
E
Sbjct: 253 E 253
>sp|Q5R4C1|TKT_PONAB Transketolase OS=Pongo abelii GN=TKT PE=2 SV=1
Length = 623
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 124/221 (56%), Gaps = 67/221 (30%)
Query: 7 IAVSIQPDKNLVS-----DAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASNS 61
I IQ K +++ DAP VDI+NI++ S PSYK G+ +ATR AYG LAKL ++
Sbjct: 274 IYSQIQSKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASD 333
Query: 62 RVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLG 121
R+IALDGDTKN TFS+ KK
Sbjct: 334 RIIALDGDTKNPTFSEIFKKE--------------------------------------- 354
Query: 122 SSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGAI 167
+PDR+IEC+IAEQN+V +A+G A RNRTVPF IRM AI
Sbjct: 355 ---------HPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAI 405
Query: 168 SQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
S++N+N GSHCGVSIGEDGPSQMALE++AMFR++P VF
Sbjct: 406 SESNINLCGSHCGVSIGEDGPSQMALENLAMFRSVPTSTVF 446
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
++L KAF Q K +PTA+IAKTFKG+ +EDKE WHGKPL + A+
Sbjct: 222 EELCKAF---GQAKHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAE 268
>sp|Q2NKZ4|TKTL2_BOVIN Transketolase-like protein 2 OS=Bos taurus GN=TKTL2 PE=2 SV=1
Length = 626
Score = 173 bits (439), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 122/222 (54%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNL-----VSDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI I+ ++NL V +P V I+NIK++ P YK G+ VAT+ AYG+ LAKL +N
Sbjct: 276 LIKSQIKTNRNLLPKPPVEGSPPVSITNIKMTCLPDYKVGDKVATQKAYGLALAKLGLAN 335
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
RV+ LDGD KNSTF + K
Sbjct: 336 ERVVVLDGDPKNSTFFEIFK---------------------------------------- 355
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
K +P+R+IECF AEQN+V VA+G A R RT+ F IRMGA
Sbjct: 356 --------KEHPERFIECFAAEQNMVSVALGCATRGRTITFVTTLGAFLTRAFDQIRMGA 407
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
ISQ+N+N +GSHCGVS+GEDGPSQMALED+AMFR+IP C VF
Sbjct: 408 ISQSNINLIGSHCGVSVGEDGPSQMALEDLAMFRSIPNCTVF 449
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSAD 126
+ L +AF +A+Q K KPTA+IAKT+KG+ PN+ED E WHGKPL AD
Sbjct: 222 EALCQAFSQAAQGKNKPTAIIAKTYKGRGIPNVEDAENWHGKPLPKERAD 271
>sp|Q4R6M8|TKTL1_MACFA Transketolase-like protein 1 OS=Macaca fascicularis GN=TKTL1 PE=2
SV=1
Length = 596
Score = 173 bits (439), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 124/222 (55%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNL-----VSDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI I+ +NL + D+P+V+I++++++SPP Y+ G+ +ATR A G+ LAKL +N
Sbjct: 247 LIESQIETSRNLDPQLPIEDSPEVNITDVRMTSPPDYRVGDKIATRKACGLALAKLGYAN 306
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
RVI LDGDTK STFS+ K
Sbjct: 307 DRVIVLDGDTKYSTFSEIFNKE-------------------------------------- 328
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
YP+R+IECF+AEQN+V VA+G A R RT+ F IR+G
Sbjct: 329 ----------YPERFIECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDQIRIGG 378
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+S++N+N +GSHCGVS+GEDG SQMALEDIAMFRTIP C +F
Sbjct: 379 LSESNINIIGSHCGVSVGEDGASQMALEDIAMFRTIPKCTIF 420
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVLKAYPDRYI 136
+ L + F +ASQVK KPTA++AKTFKG+ P+IED E WHGKP+ AD + + I
Sbjct: 193 EALCQVFWQASQVKHKPTAVVAKTFKGRGTPSIEDAESWHGKPMPRERADAIIKLIESQI 252
Query: 137 E 137
E
Sbjct: 253 E 253
>sp|Q9H0I9|TKTL2_HUMAN Transketolase-like protein 2 OS=Homo sapiens GN=TKTL2 PE=2 SV=1
Length = 626
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 123/222 (55%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNL-----VSDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI IQ ++NL V D+P++ I++IK++SPP+YK G+ +AT+ YG+ LAKL +N
Sbjct: 277 LIESQIQTNENLIPKSPVEDSPQISITDIKMTSPPAYKVGDKIATQKTYGLALAKLGRAN 336
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
RVI L GDT NSTFS+ +
Sbjct: 337 ERVIVLSGDTMNSTFSEIFR---------------------------------------- 356
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
K +P+R+IEC IAEQN+V VA+G A R RT+ F +RMGA
Sbjct: 357 --------KEHPERFIECIIAEQNMVSVALGCATRGRTIAFAGAFAAFFTRAFDQLRMGA 408
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
ISQ N+N +GSHCGVS GEDG SQMALED+AMFR+IP C VF
Sbjct: 409 ISQANINLIGSHCGVSTGEDGVSQMALEDLAMFRSIPNCTVF 450
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVL 128
+ L +AF +ASQVK KPTA++AKTFKG+ PNIED E WHGKP+ AD +
Sbjct: 223 EALCQAFWQASQVKNKPTAIVAKTFKGRGIPNIEDAENWHGKPVPKERADAI 274
>sp|P51854|TKTL1_HUMAN Transketolase-like protein 1 OS=Homo sapiens GN=TKTL1 PE=1 SV=2
Length = 596
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 125/222 (56%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNL-----VSDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI IQ +NL + D+P+V+I++++++SPP Y+ G+ +ATR A G+ LAKL +N
Sbjct: 247 LIESQIQTSRNLDPQPPIEDSPEVNITDVRMTSPPDYRVGDKIATRKACGLALAKLGYAN 306
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
+RV+ LDGDT+ STFS+ K
Sbjct: 307 NRVVVLDGDTRYSTFSEIFNKE-------------------------------------- 328
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
YP+R+IECF+AEQN+V VA+G A R RT+ F IR+G
Sbjct: 329 ----------YPERFIECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDHIRIGG 378
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
++++N+N +GSHCGVS+G+DG SQMALEDIAMFRTIP C +F
Sbjct: 379 LAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIF 420
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 77 DKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVL 128
+ L + F +ASQVK KPTA++AKTFKG+ P+IED E WH KP+ AD +
Sbjct: 193 EALCQVFWQASQVKHKPTAVVAKTFKGRGTPSIEDAESWHAKPMPRERADAI 244
>sp|Q99MX0|TKTL1_MOUSE Transketolase-like protein 1 OS=Mus musculus GN=Tktl1 PE=2 SV=2
Length = 595
Score = 150 bits (379), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 113/222 (50%), Gaps = 67/222 (30%)
Query: 6 LIAVSIQPDKNLV-----SDAPKVDISNIKLSSPPSYKKGELVATRLAYGIGLAKLAASN 60
LI IQ +K LV D+P+++I NI ++SPP Y + V+T+ A G+ LAKL N
Sbjct: 246 LIESQIQTNKILVPSPPIEDSPQINIMNICMTSPPVYVADDKVSTQRACGLALAKLGHEN 305
Query: 61 SRVIALDGDTKNSTFSDKLKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPL 120
RVI L DTKN FSD KK
Sbjct: 306 DRVIVLGSDTKNCNFSDIFKKE-------------------------------------- 327
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF--------------IRMGA 166
+P+R+I+C IAEQN+V VA+G + R+RT+ F IR+GA
Sbjct: 328 ----------HPERFIQCCIAEQNMVNVALGCSTRDRTIVFAYSFAAFFTRAFDQIRLGA 377
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
ISQ N+N +G HCGVS G+D P MALED+AMFR IP C+VF
Sbjct: 378 ISQININLIGCHCGVSTGDDNPYHMALEDLAMFRAIPNCVVF 419
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 79 LKKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVL 128
L F +A+QV+GKPTA++AKTFK + PN+ED E W+G+P+ AD +
Sbjct: 194 LCHVFSQAAQVRGKPTAVVAKTFKARGMPNVEDAESWYGRPMPKERADAI 243
>sp|Q58092|TKTC_METJA Putative transketolase C-terminal section OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0679 PE=5 SV=1
Length = 316
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 122 SSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIR-MGA 166
+ +A K +P+R+ +AEQN++G+A G A + V IR + A
Sbjct: 40 TQTAMFAKEFPERFFNAGVAEQNMIGMAAGLATTGKIVFASSFSMFASGRAWEIIRNLVA 99
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ NV V +H G+++GEDG S EDIA+ R IP +V
Sbjct: 100 YPKLNVKIVATHAGITVGEDGASHQMCEDIAIMRAIPNMVVI 141
>sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC2G5.05 PE=2 SV=1
Length = 685
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 115 WHGKPLGSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPF------------- 161
W G + L Y RYI I E + G+ G A +P+
Sbjct: 395 WEGAADFQPPSSKLGTYAGRYIRYGIREHGMAGIMNGLAVYGPIIPYGGTFLNFVSYAAG 454
Query: 162 -IRMGAISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIP 203
+RM A++ + V +V +H + +GEDGP+ +E A FR +P
Sbjct: 455 AVRMAALNNSRVIYVATHDSIGLGEDGPTHQPIETFAHFRAMP 497
>sp|A5VXW9|DXS_PSEP1 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=dxs PE=3 SV=1
Length = 631
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGA 166
GS D + YP+RY + IAEQ+ V +A G AC I A
Sbjct: 356 GSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVA 415
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D++ R IP LV
Sbjct: 416 VQNLDVLFAIDRAGL-VGEDGPTHAGSYDLSYLRCIPGMLVM 456
>sp|Q88QG7|DXS_PSEPK 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida
(strain KT2440) GN=dxs PE=3 SV=2
Length = 631
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGA 166
GS D + YP+RY + IAEQ+ V +A G AC I A
Sbjct: 356 GSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVA 415
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D++ R IP LV
Sbjct: 416 VQNLDVLFAIDRAGL-VGEDGPTHAGSYDLSYLRCIPGMLVM 456
>sp|Q1IFL1|DXS_PSEE4 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas entomophila
(strain L48) GN=dxs PE=3 SV=1
Length = 631
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAAC--------------RNRTVPFIRMGA 166
GS D + YP+RY + IAEQ+ V A G AC + I A
Sbjct: 356 GSDLVDFSERYPERYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVA 415
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D++ R IP LV
Sbjct: 416 VQDLDVLFAIDRAGL-VGEDGPTHAGAYDLSYLRCIPGMLVM 456
>sp|B0KL79|DXS_PSEPG 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida
(strain GB-1) GN=dxs PE=3 SV=1
Length = 631
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGA 166
GS D + YP RY + IAEQ+ V +A G AC I A
Sbjct: 356 GSDLVDFSERYPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVA 415
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D++ R IP LV
Sbjct: 416 VQNLDVLFAIDRAGL-VGEDGPTHAGSYDLSYLRCIPGMLVM 456
>sp|Q6F7N5|DXS_ACIAD 1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter sp.
(strain ADP1) GN=dxs PE=3 SV=1
Length = 640
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------A 166
GS K YP+R+ + IAEQ+ V +A G AC F++ G A
Sbjct: 352 GSGMVKFAKQYPERFFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVA 411
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D A RTIP ++
Sbjct: 412 LQNLDVTFGIDRAGL-VGEDGPTHAGAYDYAYMRTIPNLVIM 452
>sp|Q8RWV0|TKTC1_ARATH Transketolase-1, chloroplastic OS=Arabidopsis thaliana GN=TKL-1
PE=1 SV=1
Length = 741
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 25/113 (22%)
Query: 120 LGSSSADVLKAYPDRYIECFIAEQNL-VGV---AIGAACRN------RTVPF-------- 161
L SS+ +LKA+ D + + E+NL GV +GA C +P+
Sbjct: 458 LASSNMTLLKAFGD-FQKATPEERNLRFGVREHGMGAICNGIALHSPGLIPYCATFFVFT 516
Query: 162 ------IRMGAISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+R+ A+S+ V +V +H + +GEDGP+ +E IA FR +P L+F
Sbjct: 517 DYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHIASFRAMPNTLMF 569
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 24/110 (21%)
Query: 44 ATRLAYGIGLAKLAA-SNSRVIALDGDTK-----------------------NSTFSDKL 79
A LA GL KL A + I++DGDT+ +T D++
Sbjct: 244 ACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQRFEALGWHVIWVKNGNTGYDEI 303
Query: 80 KKAFHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVLK 129
+ A EA V KPT + T G PN + HG LG + +
Sbjct: 304 RAAIKEAKTVTDKPTLIKVTTTIGYGSPNKANSYSVHGAALGEKEVEATR 353
>sp|Q889Q1|DXS_PSESM 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=dxs PE=3 SV=1
Length = 631
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------A 166
GS D + +P+RY + IAEQ+ V +A G AC F++ G A
Sbjct: 357 GSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVA 416
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D++ R IP +V
Sbjct: 417 VQNLDVLFAIDRAGL-VGEDGPTHAGSFDLSYLRCIPGIVVM 457
>sp|P06834|DAS_PICAN Dihydroxyacetone synthase OS=Pichia angusta GN=DAS PE=3 SV=3
Length = 710
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNR----------------TVPFIRMGAISQTNVNF 174
Y RYIE I E + +A G A N+ P IRM + +
Sbjct: 422 YSGRYIEYGIREHAMCAIANGLAAYNKGTFLPITSTFFMFYLYAAPAIRMAGLQELKAIH 481
Query: 175 VGSHCGVSIGEDGPSQMALEDIAMFRTIP 203
+G+H ++ GE+GP+ +E A+FR +P
Sbjct: 482 IGTHDSINEGENGPTHQPVESPALFRAMP 510
>sp|P34736|TKT_PICST Transketolase OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=TKT PE=3 SV=2
Length = 677
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 124 SADVLKAYPDRYIECFIAEQNLVGV-----AIGAACRNRTVPF----------IRMGAIS 168
+A L Y RYI + E + + A GA +N F +R+ A+S
Sbjct: 397 AATGLGDYSGRYIRYGVREHAMGAIMNGIAAFGANYKNYGGTFLNFVSYAAGAVRLSALS 456
Query: 169 QTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ + +V +H + +GEDGP+ +E +A FR P V+
Sbjct: 457 EFPITWVATHDSIGLGEDGPTHQPIETLAHFRATPNISVW 496
>sp|Q1R1E5|DXS_CHRSD 1-deoxy-D-xylulose-5-phosphate synthase OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=dxs PE=3 SV=1
Length = 653
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------A 166
GS + YP+RY + IAEQ+ V +A G AC F++ G A
Sbjct: 374 GSDLIRFSREYPERYYDVAIAEQHAVTLAAGMACEAMKPVVAIYSTFLQRGYDQLIHDVA 433
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F GV +GEDGP+ D++ R IP +V
Sbjct: 434 VQALDVTFAIDRAGV-VGEDGPTHHGALDLSFLRCIPGMIVL 474
>sp|Q9KGU7|DXS_PSEAE 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=dxs PE=1 SV=1
Length = 627
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGAISQTNVNFVG 176
YP+RY + IAEQ+ V +A G AC I A+ +V F
Sbjct: 364 YPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAI 423
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ DI+ R IP LV
Sbjct: 424 DRAGL-VGEDGPTHAGSFDISYLRCIPGMLVM 454
>sp|Q02SL1|DXS_PSEAB 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=dxs PE=3 SV=1
Length = 627
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGAISQTNVNFVG 176
YP+RY + IAEQ+ V +A G AC I A+ +V F
Sbjct: 364 YPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAI 423
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ DI+ R IP LV
Sbjct: 424 DRAGL-VGEDGPTHAGSFDISYLRCIPGMLVM 454
>sp|B7V7R4|DXS_PSEA8 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa
(strain LESB58) GN=dxs PE=3 SV=1
Length = 627
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGAISQTNVNFVG 176
YP+RY + IAEQ+ V +A G AC I A+ +V F
Sbjct: 364 YPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAI 423
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ DI+ R IP LV
Sbjct: 424 DRAGL-VGEDGPTHAGSFDISYLRCIPGMLVM 454
>sp|A4VQS8|DXS_PSEU5 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri
(strain A1501) GN=dxs PE=3 SV=1
Length = 632
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAAC--------------RNRTVPFIRMGAISQTNVNFVG 176
YPDRY + IAEQ+ V +A G AC + I A+ +V F
Sbjct: 366 YPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAI 425
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ D++ R IP LV
Sbjct: 426 DRAGL-VGEDGPTHAGSFDLSYLRCIPGMLVM 456
>sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TKL1
PE=3 SV=1
Length = 679
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 128 LKAYPDRYIECFIAEQNLVGV-----AIGAACRNRTVPF----------IRMGAISQTNV 172
L Y RYI + E + + A GA R F +R+ A+S V
Sbjct: 403 LGDYSGRYIRYGVREHGMGAIMNGISAFGANYRPYGGTFLNFVSYASGAVRLSALSGHPV 462
Query: 173 NFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+V +H + +GEDGP+ +E +A FR IP V+
Sbjct: 463 IWVATHDSIGLGEDGPTHQPIETLAHFRAIPNLQVW 498
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1
Length = 741
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 162 IRMGAISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+R+ A+S+ V +V +H + +GEDGP+ +E +A FR +P L+F
Sbjct: 523 MRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMF 569
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 24/107 (22%)
Query: 47 LAYGIGLAKLAA-SNSRVIALDGDTK-----------------------NSTFSDKLKKA 82
LA GL KL A + I++DGDT+ +T D+++ A
Sbjct: 247 LAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSARFESLGWHVIWVKNGNTGYDEIRAA 306
Query: 83 FHEASQVKGKPTALIAKTFKGKDFPNIEDKEEWHGKPLGSSSADVLK 129
EA VK KPT + T G PN + HG LG+ + +
Sbjct: 307 IKEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHGSGLGAKEVEATR 353
>sp|Q4ZYU8|DXS_PSEU2 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=dxs PE=3 SV=1
Length = 630
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------AISQTNVNFVG 176
+P+RY + IAEQ+ V +A G AC F++ G A+ +V F
Sbjct: 366 FPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAI 425
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ D++ R IP LV
Sbjct: 426 DRAGL-VGEDGPTHAGSFDLSYLRCIPGMLVM 456
>sp|B1J3G4|DXS_PSEPW 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida
(strain W619) GN=dxs PE=3 SV=1
Length = 631
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGAISQTNVNFVG 176
YP+RY + IAEQ+ V +A G AC I A+ +V F
Sbjct: 366 YPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAI 425
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ D++ R IP LV
Sbjct: 426 DRAGL-VGEDGPTHAGSYDLSYLRCIPGMLVM 456
>sp|Q7VC14|DXS_PROMA 1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=dxs PE=3 SV=1
Length = 643
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 129 KAYPDRYIECFIAEQNLVGVAIGAACRN-RTV-------------PFIRMGAISQTNVNF 174
KA PD+YI+ IAEQ+ V +A G AC R V I I V F
Sbjct: 357 KAIPDQYIDVGIAEQHAVTLAAGMACDGLRPVCAIYSTFLQRAFDQLIHDVGIQNLPVTF 416
Query: 175 VGSHCGVSIGEDGPSQMALEDIAMFRTIP 203
V G+ +G DGP+ DI+ R+IP
Sbjct: 417 VMDRAGI-VGADGPTHQGQYDISYLRSIP 444
>sp|O94039|TKT1_CANAX Transketolase 1 OS=Candida albicans GN=TKT1 PE=3 SV=1
Length = 677
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 128 LKAYPDRYIECFIAEQNLVGV-----AIGAACRNRTVPFI----------RMGAISQTNV 172
L Y YI + E + + A GA +N F+ R+ A+S V
Sbjct: 401 LGNYDGVYIRYGVREHGMGAIMNGIAAFGANYKNYGGTFLNFVSYAAGALRLSALSHHPV 460
Query: 173 NFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+V +H + +GEDGP+ +E +A FR IP V+
Sbjct: 461 IWVATHDSIGLGEDGPTHQPIETLAHFRAIPNLSVW 496
>sp|B0VQB8|DXS_ACIBS 1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter baumannii
(strain SDF) GN=dxs PE=3 SV=1
Length = 637
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------A 166
GS K +P R+ + IAEQ+ V +A G AC F++ G A
Sbjct: 349 GSGMVKFAKQFPQRFFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVA 408
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D A RT+P ++
Sbjct: 409 LQNLDVTFGIDRAGL-VGEDGPTHAGAYDYAYMRTVPNMVIM 449
>sp|B0V710|DXS_ACIBY 1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter baumannii
(strain AYE) GN=dxs PE=3 SV=1
Length = 637
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------A 166
GS K +P R+ + IAEQ+ V +A G AC F++ G A
Sbjct: 349 GSGMVKFAKQFPQRFFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVA 408
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ D A RT+P ++
Sbjct: 409 LQNLDVTFGIDRAGL-VGEDGPTHAGAYDYAYMRTVPNMVIM 449
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1
Length = 679
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 162 IRMGAISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
IR+ A+S+ V ++ +H + +GEDGP+ +E +A FR +P LV
Sbjct: 460 IRIAALSKARVVYIMTHDSIGLGEDGPTHQPVEHLASFRAMPNILVL 506
>sp|Q3AJP8|DXS_SYNSC 1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp.
(strain CC9605) GN=dxs PE=3 SV=1
Length = 643
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 129 KAYPDRYIECFIAEQNLVGVAIGAACRN-RTV-------------PFIRMGAISQTNVNF 174
KA PD+Y++ IAEQ+ V +A G AC R V I I + V F
Sbjct: 357 KAVPDQYVDVGIAEQHAVTLAAGMACEGLRPVVAIYSTFLQRAYDQLIHDVGIQKLPVTF 416
Query: 175 VGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
V G+ +G DGP+ DI+ R IP V
Sbjct: 417 VLDRAGI-VGADGPTHQGQYDISYMRAIPNFTVM 449
>sp|Q0VMI4|DXS_ALCBS 1-deoxy-D-xylulose-5-phosphate synthase OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=dxs PE=3 SV=1
Length = 645
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------A 166
GS + + +P RY + I EQ+ V +A G AC N+ F++ G A
Sbjct: 363 GSGMVEFSRRFPGRYHDVAICEQHAVTLAGGLACENQKPVVAIYSTFLQRGYDQLIHDVA 422
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLV 207
+ + +V F G+ +GEDG + + D+A RT+P ++
Sbjct: 423 LQELDVTFGLDRAGL-VGEDGATHGGVFDLAYLRTVPNMII 462
>sp|A4XZ25|DXS_PSEMY 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas mendocina
(strain ymp) GN=dxs PE=3 SV=1
Length = 631
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAAC--------------RNRTVPFIRMGA 166
GS + +P+RY + IAEQ+ V +A G AC + I A
Sbjct: 356 GSDLVAFAERFPERYFDVAIAEQHAVTLAAGMACDGVKPVVAIYSTFLQRAYDQLIHDVA 415
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+ +V F G+ +GEDGP+ DI+ R IP LV
Sbjct: 416 VQNLDVLFAIDRAGL-VGEDGPTHAGSFDISYLRCIPGMLVM 456
>sp|Q7V7Q3|DXS_PROMM 1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus
(strain MIT 9313) GN=dxs PE=3 SV=1
Length = 644
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 129 KAYPDRYIECFIAEQNLVGVAIGAACR-------------NRTV-PFIRMGAISQTNVNF 174
KA P++YI+ IAEQ+ V +A G AC R I I V F
Sbjct: 357 KAVPEQYIDVGIAEQHAVTLAAGMACEGLKPVLAIYSTFLQRAFDQLIHDVGIQNLPVTF 416
Query: 175 VGSHCGVSIGEDGPSQMALEDIAMFRTIP 203
V G+ +G DGP+ DI+ FR IP
Sbjct: 417 VMDRAGI-VGADGPTHQGQYDISYFRAIP 444
>sp|A6V058|DXS_PSEA7 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa
(strain PA7) GN=dxs PE=3 SV=1
Length = 627
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTV--------------PFIRMGA 166
GS + YP+RY + IAEQ+ V +A G AC I A
Sbjct: 354 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 413
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLV 207
+ +V F G+ +GEDGP+ DI+ R IP LV
Sbjct: 414 VQHLDVLFAIDRAGL-VGEDGPTHAGSFDISYLRCIPGMLV 453
>sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TKL1 PE=1 SV=4
Length = 680
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 131 YPDRYIECFIAEQNLVGV-----AIGAACRNRTVPF----------IRMGAISQTNVNFV 175
Y RYI I E + + A GA + F +R+ A+S V +V
Sbjct: 407 YSGRYIRYGIREHAMGAIMNGISAFGANYKPYGGTFLNFVSYAAGAVRLSALSGHPVIWV 466
Query: 176 GSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
+H + +GEDGP+ +E +A FR++P V+
Sbjct: 467 ATHDSIGVGEDGPTHQPIETLAHFRSLPNIQVW 499
>sp|Q2SA08|DXS_HAHCH 1-deoxy-D-xylulose-5-phosphate synthase OS=Hahella chejuensis
(strain KCTC 2396) GN=dxs PE=3 SV=1
Length = 643
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAAC--------------RNRTVPFIRMGA 166
GS + K +P+RY + IAEQ+ V +A G AC + I A
Sbjct: 359 GSDLIEFSKRFPERYYDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYDQLIHDVA 418
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
I +V F G+ +GEDGP+ D+ R IP L+
Sbjct: 419 IQNLDVLFAIDRAGL-VGEDGPTHAGSFDLTFLRCIPNMLIM 459
>sp|Q48NX0|DXS_PSE14 1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=dxs PE=3 SV=1
Length = 630
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 131 YPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------AISQTNVNFVG 176
+P+RY + IAEQ+ V +A G AC F++ G A+ +V F
Sbjct: 366 FPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAI 425
Query: 177 SHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
G+ +GEDGP+ D++ R IP +V
Sbjct: 426 DRAGL-VGEDGPTHAGSFDLSYLRCIPGMVVM 456
>sp|B1HRX4|DXS_LYSSC 1-deoxy-D-xylulose-5-phosphate synthase OS=Lysinibacillus
sphaericus (strain C3-41) GN=dxs PE=3 SV=1
Length = 633
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 119 PLGSSSADVLKAYPDRYIECFIAEQNLVGVAIGAACRNRTVPFIRMGA------------ 166
P+GS + + +P+R+ + IAEQ+ +A G A +N PF+ + +
Sbjct: 344 PVGSKLQGIQQDFPNRFFDVGIAEQHAATMAAGLATQNMK-PFLAIYSTFLQRAYDQVLH 402
Query: 167 -ISQTNVN-FVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLVF 208
I++ N+N F+G +G DG + + DIA R IP +
Sbjct: 403 DIARPNLNVFIGIDRAGLVGADGETHQGVFDIAFLRHIPNMTIM 446
>sp|Q21F93|DXS_SACD2 1-deoxy-D-xylulose-5-phosphate synthase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=dxs PE=3 SV=1
Length = 649
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 121 GSSSADVLKAYPDRYIECFIAEQNLVGVAIGAAC--------------RNRTVPFIRMGA 166
GS + + +PDR+ + IAEQ+ V +A G AC + + A
Sbjct: 364 GSGMVEFAERFPDRFHDVAIAEQHAVTLAAGLACEKFKPVVAIYSTFLQRAYDQLVHDVA 423
Query: 167 ISQTNVNFVGSHCGVSIGEDGPSQMALEDIAMFRTIPACLV 207
+ +V F G+ +GEDGP+ DI+ R IP ++
Sbjct: 424 LQNLDVTFAIDRAGL-VGEDGPTHAGAFDISFLRCIPKIII 463
>sp|A2C9X1|DXS_PROM3 1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus
(strain MIT 9303) GN=dxs PE=3 SV=1
Length = 644
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 129 KAYPDRYIECFIAEQNLVGVAIGAACRNRT------VPFIRMG--------AISQTNVNF 174
KA P++YI+ IAEQ+ V +A G AC F++ I V F
Sbjct: 357 KAVPEQYIDVGIAEQHAVTLAAGMACEGLKPVLAIYSTFLQRAFDQLIHDVGIQNLPVTF 416
Query: 175 VGSHCGVSIGEDGPSQMALEDIAMFRTIP 203
V G+ +G DGP+ DI+ FR IP
Sbjct: 417 VMDRAGI-VGADGPTHQGQYDISYFRAIP 444
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,956,601
Number of Sequences: 539616
Number of extensions: 2843349
Number of successful extensions: 8362
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 7768
Number of HSP's gapped (non-prelim): 629
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)