RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10437
         (619 letters)



>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase
           domain {Bacteriophage T4 [TaxId: 10665]}
          Length = 149

 Score = 26.2 bits (57), Expect = 6.8
 Identities = 4/45 (8%), Positives = 14/45 (31%)

Query: 480 TLADNRHYTFYIWKRLYENIPYFRYLMIPVYVFSFYHLMRNCTFK 524
           TLA       Y  ++   ++     + +        + +   + +
Sbjct: 17  TLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGR 61


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.142    0.444 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,387,315
Number of extensions: 114317
Number of successful extensions: 287
Number of sequences better than 10.0: 1
Number of HSP's gapped: 287
Number of HSP's successfully gapped: 15
Length of query: 619
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 528
Effective length of database: 1,158,166
Effective search space: 611511648
Effective search space used: 611511648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (25.6 bits)