Query psy10442
Match_columns 430
No_of_seqs 133 out of 397
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 18:17:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10442.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10442hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06728 PIG-U: GPI transamida 100.0 3E-90 6.5E-95 706.7 34.5 363 11-390 2-382 (382)
2 PLN02841 GPI mannosyltransfera 100.0 2.1E-78 4.5E-83 616.8 37.5 360 6-405 9-418 (440)
3 KOG2552|consensus 100.0 2.1E-75 4.6E-80 571.7 30.1 374 1-423 13-387 (388)
4 KOG3893|consensus 100.0 7.6E-72 1.6E-76 536.8 24.3 361 6-405 22-405 (405)
5 PF05007 Mannosyl_trans: Manno 100.0 1.7E-47 3.7E-52 367.7 25.0 235 159-402 1-259 (259)
6 PF09594 DUF2029: Protein of u 98.4 5.3E-05 1.2E-09 71.9 20.9 172 63-268 1-175 (241)
7 PRK13375 pimE mannosyltransfer 97.9 0.034 7.3E-07 57.9 30.8 285 8-339 23-324 (409)
8 TIGR03459 crt_membr carotene b 97.7 0.011 2.5E-07 62.1 23.9 183 146-343 198-425 (470)
9 PF13231 PMT_2: Dolichyl-phosp 97.2 0.012 2.7E-07 51.7 13.8 120 65-212 2-128 (159)
10 COG5650 Predicted integral mem 97.2 0.00064 1.4E-08 71.6 6.2 102 151-257 205-308 (536)
11 PF09852 DUF2079: Predicted me 96.0 0.49 1.1E-05 50.0 18.2 148 36-215 7-166 (449)
12 PF02366 PMT: Dolichyl-phospha 95.6 0.21 4.6E-06 48.0 12.5 93 87-206 84-188 (245)
13 COG5542 Predicted integral mem 95.0 0.23 4.9E-06 51.4 10.9 134 57-216 87-222 (420)
14 PRK13279 arnT 4-amino-4-deoxy- 94.4 9.5 0.00021 41.6 26.5 141 42-210 34-190 (552)
15 COG1807 ArnT 4-amino-4-deoxy-L 92.2 19 0.00042 38.7 33.9 140 40-208 34-186 (535)
16 TIGR03663 conserved hypothetic 90.6 25 0.00055 37.1 26.0 58 143-200 100-164 (439)
17 PF04188 Mannosyl_trans2: Mann 89.5 3.8 8.3E-05 43.3 11.7 69 143-212 144-212 (443)
18 TIGR03766 conserved hypothetic 89.4 9.8 0.00021 40.7 14.8 163 7-210 70-247 (483)
19 COG4346 Predicted membrane-bou 81.9 37 0.00081 34.8 13.5 127 146-274 189-322 (438)
20 KOG2515|consensus 78.7 89 0.0019 33.4 15.4 160 146-308 129-298 (568)
21 KOG2552|consensus 75.9 4.9 0.00011 41.2 5.3 102 263-408 228-329 (388)
22 PF10131 PTPS_related: 6-pyruv 74.4 1.5E+02 0.0032 33.0 24.4 77 64-168 3-80 (616)
23 PF05208 ALG3: ALG3 protein; 71.1 24 0.00051 36.5 9.0 51 165-215 129-179 (368)
24 KOG2647|consensus 56.2 30 0.00066 36.3 6.5 129 46-201 76-214 (444)
25 COG3463 Predicted membrane pro 51.6 3.3E+02 0.0071 29.0 13.4 131 36-199 35-178 (458)
26 PF09913 DUF2142: Predicted me 41.3 4E+02 0.0087 27.1 12.8 64 149-212 152-225 (389)
27 KOG2762|consensus 38.2 81 0.0018 32.6 6.2 51 166-216 158-208 (429)
28 KOG4650|consensus 35.3 1.1E+02 0.0023 30.2 6.2 57 237-305 110-166 (311)
29 PF01864 DUF46: Putative integ 34.2 1.2E+02 0.0026 28.1 6.2 34 384-417 86-119 (175)
30 PRK04032 hypothetical protein; 28.4 2.4E+02 0.0051 25.8 7.0 35 381-415 66-100 (159)
31 KOG2642|consensus 27.7 7.2E+02 0.016 25.9 15.1 56 154-209 125-180 (446)
32 COG0575 CdsA CDP-diglyceride s 27.0 2.4E+02 0.0052 27.6 7.4 36 378-413 196-231 (265)
33 PF03901 Glyco_transf_22: Alg9 24.9 7.7E+02 0.017 25.4 27.5 71 143-213 112-194 (418)
34 PRK12876 ubiA prenyltransferas 24.7 5.8E+02 0.013 25.6 9.8 39 380-418 167-207 (300)
35 PLN02816 mannosyltransferase 23.0 1E+03 0.022 26.1 20.8 125 149-275 155-296 (546)
36 PF03155 Alg6_Alg8: ALG6, ALG8 21.2 1E+03 0.023 25.5 14.0 70 145-214 137-207 (469)
No 1
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=100.00 E-value=3e-90 Score=706.74 Aligned_cols=363 Identities=42% Similarity=0.820 Sum_probs=324.2
Q ss_pred HHHHHHHHH--hhccchhhhccceeeeccCCchhhHhHHHHHHhCCCCCCCCCccccchHHHHHHHhhhcC-C-Cccccc
Q psy10442 11 ISTLLRYWL--CHSEFKSLLQDRVEISNPINAWKNLVEGVTLMKDQVNPYDGDIFHESPLILHMFKFIIGN-D-NPYVQQ 86 (430)
Q Consensus 11 ~~~~lRl~L--~~~~~~~~l~~~~evsTp~tsy~~~~Eg~~l~~~g~sPY~~~tyh~tPLLl~ll~~~~~~-~-~~~~~~ 86 (430)
+|+++|+.+ ..+++++.+++|+|+|||+|||||++||+++.++|.||||||++|||||++++++++... . .+.++.
T Consensus 2 ~~~~~Rl~L~~~~~~l~~~l~~rvE~sTP~tSfkrl~Eg~~L~~~g~spY~g~v~h~~PLlL~l~~~l~~~~~~~~~~~~ 81 (382)
T PF06728_consen 2 AGVLLRLLLFSLFPSLPDWLSDRVELSTPLTSFKRLQEGVYLYKHGISPYSGGVFHQPPLLLALFSFLLKSSPNSPNSPI 81 (382)
T ss_pred HHHHHHHHHHHHhcchhhhhhCCeEecCccchHHHHHHHHHHHHcCCCCcCCCCccCcCHHHHHHHHHHhcccccccchH
Confidence 588999999 569999999999999999999999999999999999999999999999999999998411 0 112356
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhcccChh
Q psy10442 87 SIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICLTST 166 (430)
Q Consensus 87 ~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~st~ 166 (430)
..+++|+++|+++|++++++.|++.++..++++ .++ +.+..+..++++||+||++|++|+++||+
T Consensus 82 ~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~------~~~---------~~~~~~~lv~~~YLfNP~tIlscva~ST~ 146 (382)
T PF06728_consen 82 LISLLFILVDLLIAWLLYRIAKSYQKQESKRQK------SPN---------EKSSSPWLVAAFYLFNPLTILSCVALSTT 146 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc------Cch---------hcccchHHHHHHHHHCHHHHHHHHhcccH
Confidence 889999999999999999998876432211111 111 11136788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcc-------cc----hhhHHH---HHHHHHHH
Q psy10442 167 VFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQY-------KK----SWRLFL---AGFLLCYS 232 (430)
Q Consensus 167 ~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~-------~~----~~~~~~---~~~~~~~~ 232 (430)
++.|++++.++++++||+...|++++|+++|+++||+++++|+++.+.+. +. ..++.+ .++.++++
T Consensus 147 ~f~nl~i~~sl~~a~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 226 (382)
T PF06728_consen 147 VFTNLFILLSLYFAVKGNVFLSAISLALATYLSLYPILLLPPLLLLLYSSWKQSKSKNSSKSSKWSSFLQILLIFIASLA 226 (382)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhhccccccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999776551 00 111222 26888999
Q ss_pred HHHHHHHHhccCCchhHHhhhhheeeccCCCCCchhhHHHHHhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHH
Q psy10442 233 GFLYFCLGLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFTEMFEHFRVLFIVAFQINSIFLYVLPLTLRLYKEPVLVA 312 (430)
Q Consensus 233 ~L~~~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~emF~~f~~ff~~vfq~~~~~~~v~pl~ir~~~~p~~~~ 312 (430)
++..+||...| ||+|+++||+.+++++|++||+|+|||||+|||||||+||+++||+|+ ++|++|+++|++|+|.+++
T Consensus 227 ~L~~~S~~~~~-sw~fl~~ty~~~l~~~dltPNlGl~WYfF~EmFd~Fr~fF~~vF~~~~-~~y~~Pl~irl~~~p~~~~ 304 (382)
T PF06728_consen 227 ALLLLSYLITG-SWNFLDSTYGFILTVPDLTPNLGLWWYFFTEMFDHFRPFFLFVFQLHP-FIYIIPLTIRLRKQPLFAF 304 (382)
T ss_pred HHHHHHHHHcC-ChHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcccCcHHHH
Confidence 99999999766 999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHhccccccchhhHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q psy10442 313 ICLTGLAAVFKSYPCVGDIALYLALMPLCKYLFPFMQQGFIVACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAF 390 (430)
Q Consensus 313 ~~~~~~~~~Fk~ypT~~d~~~~lsLLPl~~~~~~~~~~~~~~~~~~l~~~~L~p~~~~lWi~~~sgNaNF~~a~tLvf 390 (430)
+++++++++||||||+||.++|++++|++.+.+++||+++++++.++++.+|+|++||+||+.||||||||||+||||
T Consensus 305 ~~~~~~~~~fk~Ypt~~D~~~~lsll~~~~~~~~~~r~~~~~~~~~l~~~~L~p~~~~lWi~~gsgNaNFfya~tLv~ 382 (382)
T PF06728_consen 305 FILLGIISVFKPYPTVGDVGLYLSLLPLFSHLFPYMRYPFLVALTLLYALLLSPIFYHLWIYLGSGNANFFYAITLVY 382 (382)
T ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHhHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcceeeeeeeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999986
No 2
>PLN02841 GPI mannosyltransferase
Probab=100.00 E-value=2.1e-78 Score=616.80 Aligned_cols=360 Identities=16% Similarity=0.186 Sum_probs=305.2
Q ss_pred HHHHHHHHHHHHHHhhccchhhhccceeeeccCCchhhHhHHHHHHhCCCCCCCCCccccchHHHHHHHhhhcCCCcccc
Q psy10442 6 VVQFVISTLLRYWLCHSEFKSLLQDRVEISNPINAWKNLVEGVTLMKDQVNPYDGDIFHESPLILHMFKFIIGNDNPYVQ 85 (430)
Q Consensus 6 ~~~~~~~~~lRl~L~~~~~~~~l~~~~evsTp~tsy~~~~Eg~~l~~~g~sPY~~~tyh~tPLLl~ll~~~~~~~~~~~~ 85 (430)
..++.+|+++|++++. +++++|+|+||+||.+||+|++||++++.+|.|||+|+||||||||++++.|+.. .||
T Consensus 9 ~~vll~a~~lRl~L~~--yg~~~D~~~eVsytdidY~vftDga~lv~~G~SPY~r~TYrytPLLa~LllPn~~----~~~ 82 (440)
T PLN02841 9 RSLLLASALLRVALIV--YGEWQDAHMEVRYTDVDYLVFSDAAALVASGKSPFARDTYRYSPLLALLLVPNSL----LHR 82 (440)
T ss_pred HHHHHHHHHHHHHHHH--HHHHhccCccccccccchHHHHHHHHHHHcCCCCCCCCCCCcChHHHHHHcchhh----hhh
Confidence 4678889999999998 7788889999999999999999999999999999999999999999999977543 357
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhcccCh
Q psy10442 86 QSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICLTS 165 (430)
Q Consensus 86 ~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~st 165 (430)
.+||++|+++|+++|+++++++|.. +.++ ..+..++++||+||++|++|+|||+
T Consensus 83 ~fgk~LF~l~Dll~a~ll~~il~~~-------~~~~-------------------~~~~~~a~~wL~NPlti~istrGSs 136 (440)
T PLN02841 83 SWGKFLFSAADLLVGLFIHTILRLR-------GVPE-------------------KVCTWSVMVWLFNPFTFTIGTRGNC 136 (440)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-------Cccc-------------------cccHHHHHHHHhCcHHHHHhcccch
Confidence 8999999999999999999997642 1101 1244678899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccc-------------hh------------
Q psy10442 166 TVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKK-------------SW------------ 220 (430)
Q Consensus 166 ~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~-------------~~------------ 220 (430)
|++.|++++.++|++++|+...||+++|+++|+|+||++|++|+++++.++.. +.
T Consensus 137 e~i~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (440)
T PLN02841 137 EPIVCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILVLDKQYFGPGGRPALTKWNSKQNKTPSSNTEATS 216 (440)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHhccccccccccccchhhhccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999953210 00
Q ss_pred ---------h-----HHH--H-HHHHHHHHHHHHHHHhccCCchhHHhhhhheeeccCCCCCchhhHHHHHhhhh----h
Q psy10442 221 ---------R-----LFL--A-GFLLCYSGFLYFCLGLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFTEMFE----H 279 (430)
Q Consensus 221 ---------~-----~~~--~-~~~~~~~~L~~~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~emF~----~ 279 (430)
+ +.+ . +++++++++++.+|.+|| |||++|||+||++|+|||||||+|||..+...+ .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~f~l~s~~tf~~l~~~~y~~YG--~~FL~eaylYHl~R~DhRHNFS~yfy~lYL~~~~~~~~ 294 (440)
T PLN02841 217 FLFNLWTFLTSLFSRERIMFGLISGGVFFALTGVSFYLYG--WEFLNEALLYHLTRTDPRHNFSIYFYHIYLHHEQGFSL 294 (440)
T ss_pred hhhhhhHHHHhccCHhhhhhHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHhheecCCCccCcHHHHHHHHhCCCcchh
Confidence 0 111 1 677899999999999999 999999999999999999999999999975432 2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhccccccchhhHHHHHHhhhhhhhccchhhHHHHHHHHH
Q psy10442 280 FRVLFIVAFQINSIFLYVLPLTLRLYKEPVLVAICLTGLAAVFKSYPCVGDIALYLALMPLCKYLFPFMQQGFIVACFFI 359 (430)
Q Consensus 280 f~~ff~~vfq~~~~~~~v~pl~ir~~~~p~~~~~~~~~~~~~Fk~ypT~~d~~~~lsLLPl~~~~~~~~~~~~~~~~~~l 359 (430)
..+...+++|+.. ++-+.+++.+|.++|+|+||++||+||||||+|||.||++|||++.+..+..++. -+...+
T Consensus 295 ~~~~~aFlPQl~l----~~~~~~~~~~dl~~~~f~qT~~FVtfNKVcTsQYF~Wyl~lLPl~l~~~~~~~~~--~~~~~l 368 (440)
T PLN02841 295 VERLASFLPQFLV----QLALILCFSQDLPFCLFLQTVAFVAFNKVITAQYFVWFFCLLPLILPWSRMKLKW--KGLLCI 368 (440)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHccccHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccchhh--HHHHHH
Confidence 2356778888754 3335567788999999999999999999999999999999999998866543321 233445
Q ss_pred HHHHHHHHHHHHHHHh--cCCchHHH--HHHHHHHHHHHHHHHHHHHHHH
Q psy10442 360 GCSMFAPTVWHLWIYT--RSANANFY--FGVTLAFATSQIFLLTDLLFAY 405 (430)
Q Consensus 360 ~~~~L~p~~~~lWi~~--~sgNaNF~--~a~tLvf~~~~~~ll~d~i~~~ 405 (430)
..|+.+++.|..|.|. ..|.+.|+ |.++++|+++|++++..++..+
T Consensus 369 ~lW~~~Q~~WL~~aY~LEF~G~n~F~~lw~asl~Ff~~n~~il~~~i~~~ 418 (440)
T PLN02841 369 LVWMGSQLHWLMWAYLLEFKGRNVFLQLWIASLLFLAANTFVLLMIIQHH 418 (440)
T ss_pred HHHHHHHHHHHHHHHHhHhccccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7788889999999987 67777776 9999999999999999999875
No 3
>KOG2552|consensus
Probab=100.00 E-value=2.1e-75 Score=571.70 Aligned_cols=374 Identities=35% Similarity=0.688 Sum_probs=322.6
Q ss_pred CCchhHHHHHHHHHHHHHHhhccchhhhccceeeeccCCchhhHhHHHHHHhCCCCCCCCCccccchHHHHHHHhhhcCC
Q psy10442 1 MDKGLVVQFVISTLLRYWLCHSEFKSLLQDRVEISNPINAWKNLVEGVTLMKDQVNPYDGDIFHESPLILHMFKFIIGND 80 (430)
Q Consensus 1 m~~~~~~~~~~~~~lRl~L~~~~~~~~l~~~~evsTp~tsy~~~~Eg~~l~~~g~sPY~~~tyh~tPLLl~ll~~~~~~~ 80 (430)
|+.+....+.++..+|..+..+..++.+++|+|++||++|+||++||.++.++|.|||+|+.+|+|||++.++.+
T Consensus 13 ~~~k~~~~l~i~~~v~~~lf~s~~a~~is~rvEvsTPvsS~rRl~EGi~Ll~~gl~PY~G~vfH~sPLlL~ll~~----- 87 (388)
T KOG2552|consen 13 EELKLALWLVISAAVRVRLFRSSLAEFISERVEVSTPVSSFRRLQEGIALLDNGLSPYSGGVFHESPLLLSLLRG----- 87 (388)
T ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHHhhcCceecCcchHHHHHhhhHHHHhcCCCcccCccccCCcchhhhhch-----
Confidence 455667778888899999988888899999999999999999999999999999999999999999999999851
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHh
Q psy10442 81 NPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIE-KQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILN 159 (430)
Q Consensus 81 ~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~ 159 (430)
.+.+.++..-|..++.+++.......+....+| ..+++++++|.++.+..+.+....+..++.+|++||+||++
T Consensus 88 -----~~~~l~~~i~~a~t~~~lyf~i~dl~~~~l~kq~~k~~~~ya~d~~~l~~~p~~~~~i~~~v~l~Yl~NPlTilS 162 (388)
T KOG2552|consen 88 -----YYLELLFMITDARTAILLYFAIADLLKYLLLKQIQKEQKAYALDVRELQFLPMEILPIGDLVALLYLFNPLTILS 162 (388)
T ss_pred -----HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHhhcCcccccHHHHHHHHHHhCceeeee
Confidence 123333444444444444333322222211122 12456688899888887766666788999999999999999
Q ss_pred hcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHH
Q psy10442 160 CICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKKSWRLFLAGFLLCYSGFLYFCL 239 (430)
Q Consensus 160 ~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~~~~~~~~~~~~~~~~L~~~sy 239 (430)
|++.|+++++|++++.++|++++|+..+|++++++++|+|+||+.|.+|+++.+.+.+.. ....++.++....+.++
T Consensus 163 Ci~~St~~I~N~~v~~~ly~av~~~~~l~a~~la~~t~~s~yp~~L~~P~l~~L~~~~~~---~~~~~i~s~li~~~~~~ 239 (388)
T KOG2552|consen 163 CIGLSTTVIENFAVAVSLYGAVTGRVPLAAFGLAIATHLSLYPATLTIPLLFLLGYGLDA---PHLPFIFSVLIWSLYVL 239 (388)
T ss_pred eccccchHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhcccchHHHHHHHHHHHhccccC---cccchhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999765331 12345777777778888
Q ss_pred HhccCCchhHHhhhhheeeccCCCCCchhhHHHHHhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHH
Q psy10442 240 GLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFTEMFEHFRVLFIVAFQINSIFLYVLPLTLRLYKEPVLVAICLTGLA 319 (430)
Q Consensus 240 ~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~emF~~f~~ff~~vfq~~~~~~~v~pl~ir~~~~p~~~~~~~~~~~ 319 (430)
.+.| +|+|+..|||++++.+|+.||+|+|||||+|||||||.+|+++|
T Consensus 240 ~l~~-~~~f~~~~ygfilsi~dl~Pniglfwyff~e~F~~f~~~flivf------------------------------- 287 (388)
T KOG2552|consen 240 FLLS-SWEFFKRTYGFILSIEDLSPNIGLFWYFFAEMFEFFRNFFLIVF------------------------------- 287 (388)
T ss_pred HHHH-HHHHHhhhccceeeHHhhCCCccHHHHHHHHHHHHHhhHHHHhh-------------------------------
Confidence 8888 89999999999999999999999999999999999999999887
Q ss_pred HhccccccchhhHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q psy10442 320 AVFKSYPCVGDIALYLALMPLCKYLFPFMQQGFIVACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLT 399 (430)
Q Consensus 320 ~~Fk~ypT~~d~~~~lsLLPl~~~~~~~~~~~~~~~~~~l~~~~L~p~~~~lWi~~~sgNaNF~~a~tLvf~~~~~~ll~ 399 (430)
.++|+||.++|++++|+|.+..++||+++++.|.++.+..|+|++||+|+++|||||||||+.|++|+++|+.+++
T Consensus 288 ----~~~slgd~~lyls~~p~~~~~~~~~~~~f~~~~~~l~~~lL~pv~~hlWi~~gsgNaNF~fg~tl~y~~~qi~lv~ 363 (388)
T KOG2552|consen 288 ----AYISLGDVALYLSLLPLFVNELKDMRYSFFIFCGYLGTSLLMPVMWHLWIVRGSGNANFYFGNTLVYACAQINLVV 363 (388)
T ss_pred ----hhcchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhheecCCCccceehhhHHHHHHHHHHHHH
Confidence 3339999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcccccCCc
Q psy10442 400 DLLFAYLKRDYTLENGIQKTIKGK 423 (430)
Q Consensus 400 d~i~~~l~~~~~~~~~~~~~~~~~ 423 (430)
|.++||+||||++++|..++.|+|
T Consensus 364 d~~~a~lr~e~~l~~~~~~~~~~~ 387 (388)
T KOG2552|consen 364 DSVFAMLRREYDLKYSNALLKKTK 387 (388)
T ss_pred HHHHHHHHHHHHhhcchhhhhccC
Confidence 999999999999999999888776
No 4
>KOG3893|consensus
Probab=100.00 E-value=7.6e-72 Score=536.84 Aligned_cols=361 Identities=15% Similarity=0.238 Sum_probs=296.2
Q ss_pred HHHHHHHHHHHHHHhh-ccchhhhccceeee-ccCCchhhHhHHHHHHhCCCCCCCCCccccchHHHHHHHhhhcCCCcc
Q psy10442 6 VVQFVISTLLRYWLCH-SEFKSLLQDRVEIS-NPINAWKNLVEGVTLMKDQVNPYDGDIFHESPLILHMFKFIIGNDNPY 83 (430)
Q Consensus 6 ~~~~~~~~~lRl~L~~-~~~~~~l~~~~evs-Tp~tsy~~~~Eg~~l~~~g~sPY~~~tyh~tPLLl~ll~~~~~~~~~~ 83 (430)
...+.+|.+.|++|+. +.+|| ++..|. ||+ ||++++||++.+.+|.|||+|+||||||+++|++.|++-.
T Consensus 22 ~~~llva~l~Ri~Lv~Yg~~hD---~~~~v~~TDI-DY~VftDaar~Vs~G~sPf~R~TYRYtP~la~ll~pni~~---- 93 (405)
T KOG3893|consen 22 FTHLLVAFLARIALVFYGQLHD---RQSAVPYTDI-DYKVFTDAARQVSAGDSPFARATYRYTPILAWLLTPNIYL---- 93 (405)
T ss_pred HHHHHHHHHHHHHHHHHhhhcc---hhccCCcccc-ceeEeehhhHHhhcCCChhhhhhhcccHHHHHHhccceec----
Confidence 3456788999999998 44565 566665 887 8999999999999999999999999999999999996653
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhccc
Q psy10442 84 VQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICL 163 (430)
Q Consensus 84 ~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~ 163 (430)
+|.+||++|+.+|+++|++++|+...+ +.+ + +.+..+++.||+||+++++|+||
T Consensus 94 ~p~~GK~Lf~~~Dll~a~L~~kLl~~~------~i~-~-------------------~~a~~~~~fWLlNPl~aiIStRG 147 (405)
T KOG3893|consen 94 FPAWGKLLFAIFDLLIATLIYKLLHMR------SIS-R-------------------KQALIYASFWLLNPLTAIISTRG 147 (405)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhh------hcc-h-------------------hhhhHhhhhhhcCchheeeecCC
Confidence 489999999999999999999997531 111 1 13556888999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccc--hh----hHH------H---HHHH
Q psy10442 164 TSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKK--SW----RLF------L---AGFL 228 (430)
Q Consensus 164 st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~--~~----~~~------~---~~~~ 228 (430)
|+|++.+.++++++|...|++...||++.|+++|+|+||++|.+|+.+.++++++ +. ++. + ...+
T Consensus 148 Naesi~~~lvi~~lyllqK~~v~~A~l~~GlaIh~KIYPliY~l~i~l~ls~~~~~s~~~~~l~sLL~~~k~l~~~~~tL 227 (405)
T KOG3893|consen 148 NAESIVAFLVILTLYLLQKSEVFLAGLAHGLAIHLKIYPLIYSLAIYLSLSTRKTQSTPLDKLCSLLSINKQLCLILGTL 227 (405)
T ss_pred chHHHHHHHHHHHHHHHHHhHHHHHHHHhhheeeeEechHHhhhhhheEEecCCCCCcHHHHHHHHhccccchhhhHHHH
Confidence 9999999999999999999999999999999999999999999999999986543 11 111 1 2577
Q ss_pred HHHHHHHHHHHHhccCCchhHHhhhhheeeccCCCCCchhhHHHHHhh-hhhHHHHHHHHHhHHHHHHHHHHHHhhhcc-
Q psy10442 229 LCYSGFLYFCLGLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFTEM-FEHFRVLFIVAFQINSIFLYVLPLTLRLYK- 306 (430)
Q Consensus 229 ~~~~~L~~~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~em-F~~f~~ff~~vfq~~~~~~~v~pl~ir~~~- 306 (430)
.++++..+.+|.+|| |||++|+|.||+.|+|+|||||+|+|+.+.- .+..-+.-+..+.+.||++.++-++..+.+
T Consensus 228 tsf~~~~~~fY~iYG--~eFLd~~ylYH~~R~D~rHNFS~~f~llYl~sas~~~s~~l~~~AflPQllLi~~~~~~~~~~ 305 (405)
T KOG3893|consen 228 TSFAACTWTFYYIYG--WEFLDEAYLYHFVRRDHRHNFSLYFLLLYLGSASAEGSAILGLLAFLPQLLLILYLSLSFGQQ 305 (405)
T ss_pred HHHHHHHHHHHHHHh--HHHHHHHHHhheecccccccCCHHHHHHHHHccCccHHHHHhHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999 9999999999999999999999999998632 222444444444445555556666777655
Q ss_pred chHHHHHHHHHHHHhccccccchhhHHHHHHhhhhhhhccchh-hHHHHHHHHH--HHHHHHHHHHHHHHHhcCCchHHH
Q psy10442 307 EPVLVAICLTGLAAVFKSYPCVGDIALYLALMPLCKYLFPFMQ-QGFIVACFFI--GCSMFAPTVWHLWIYTRSANANFY 383 (430)
Q Consensus 307 ~p~~~~~~~~~~~~~Fk~ypT~~d~~~~lsLLPl~~~~~~~~~-~~~~~~~~~l--~~~~L~p~~~~lWi~~~sgNaNF~ 383 (430)
|.++|+|+||++||++|||||+|||+||+++||++.|..+..+ +.+....+|+ |+.||.|++.. +..+.|..+.
T Consensus 306 ~Lpfc~F~~TfafVTyNKVcTSQYFvWYLv~LPl~l~~~~l~wkr~l~ll~lW~~~Q~lWL~~aY~l---Ef~gkNtF~~ 382 (405)
T KOG3893|consen 306 DLPFCLFAQTFAFVTYNKVCTSQYFVWYLVLLPLVLPNFMLSWKRALGLLFLWFITQALWLLPAYLL---EFQGKNTFYP 382 (405)
T ss_pred CCCceeeeeeeeEEEechhhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---hcccccchHH
Confidence 9999999999999999999999999999999999999886433 3343333343 77777777765 5556666554
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHH
Q psy10442 384 -FGVTLAFATSQIFLLTDLLFAY 405 (430)
Q Consensus 384 -~a~tLvf~~~~~~ll~d~i~~~ 405 (430)
|-++++|++.|+.++.|++.++
T Consensus 383 i~Lag~lFf~~N~~iL~qiishy 405 (405)
T KOG3893|consen 383 IFLAGLLFFATNVYILKQIISHY 405 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998753
No 5
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=100.00 E-value=1.7e-47 Score=367.69 Aligned_cols=235 Identities=17% Similarity=0.272 Sum_probs=197.7
Q ss_pred hhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccch-h----h-----HHH--H-
Q psy10442 159 NCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKKS-W----R-----LFL--A- 225 (430)
Q Consensus 159 ~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~~-~----~-----~~~--~- 225 (430)
+|||||+|++.++++++++|++.||+...||+++|+|+|+|+||+||.+|+++++.+++.+ . + +.+ .
T Consensus 1 ISTRGnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~f~~ 80 (259)
T PF05007_consen 1 ISTRGNAESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYLSNRKNGSFRSRLKRLLNPNRLKFGL 80 (259)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHHhccccchHHHHHHHhcCHhHhhhHH
Confidence 5899999999999999999999999999999999999999999999999999999765431 1 1 112 2
Q ss_pred HHHHHHHHHHHHHHHhccCCchhHHhhhhheeeccCCCCCchhhHHHHHhhhhhH------HHHHHHHHhHHHHHHHHHH
Q psy10442 226 GFLLCYSGFLYFCLGLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFTEMFEHF------RVLFIVAFQINSIFLYVLP 299 (430)
Q Consensus 226 ~~~~~~~~L~~~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~emF~~f------~~ff~~vfq~~~~~~~v~p 299 (430)
.++.++++++.++|.+|| |||++|||.||++|+|||||||+|||..+-..+.- .+...+++|+.. +..
T Consensus 81 ~s~~tf~~l~~~~Y~~YG--~~FL~eaylYHl~R~DhRHNFS~yfy~lYL~~~~~~~~s~~~~~~aflPQl~l----~~~ 154 (259)
T PF05007_consen 81 ISAITFAALTLLMYYIYG--WEFLYEAYLYHLTRKDHRHNFSPYFYLLYLSSSSPTYSSSILGLLAFLPQLIL----ILV 154 (259)
T ss_pred HHHHHHHHHHHHHHHHHC--hHHHHHHHhhheEeecCCccCcHHHHHHHHcCCCCcchhhHHHHHHHHHHHHH----HHH
Confidence 678899999999999999 99999999999999999999999999997544332 245667777644 344
Q ss_pred HHhhhccchHHHHHHHHHHHHhccccccchhhHHHHHHhhhhhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHh--c
Q psy10442 300 LTLRLYKEPVLVAICLTGLAAVFKSYPCVGDIALYLALMPLCKYLFPF-MQQGFIVACFFIGCSMFAPTVWHLWIYT--R 376 (430)
Q Consensus 300 l~ir~~~~p~~~~~~~~~~~~~Fk~ypT~~d~~~~lsLLPl~~~~~~~-~~~~~~~~~~~l~~~~L~p~~~~lWi~~--~ 376 (430)
+++++++|.++|+++||++||+||||||+|||.||+++||+..+..+. .++. +...+..|+.+++.|..|.|. .
T Consensus 155 ~~~~~~~dL~~~~f~qT~~FVtFNKVcTsQYF~Wyl~lLPl~l~~~~l~s~~~---~~~~l~~W~~~Q~~WL~~AY~LEF 231 (259)
T PF05007_consen 155 ISLKFYRDLPFCLFLQTFAFVTFNKVCTSQYFLWYLCLLPLVLPRSRLLSWRK---GVFLLALWVASQALWLLQAYLLEF 231 (259)
T ss_pred HHHHHHCccchHHHHHHHHHHHhchhhcchHHHHHHHHHHHHhchhccchHHH---HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 467889999999999999999999999999999999999999987664 2222 223446678888888888887 5
Q ss_pred CCchHHH--HHHHHHHHHHHHHHHHHHH
Q psy10442 377 SANANFY--FGVTLAFATSQIFLLTDLL 402 (430)
Q Consensus 377 sgNaNF~--~a~tLvf~~~~~~ll~d~i 402 (430)
.|.+.|. |.++++|+++|++++.++|
T Consensus 232 ~G~n~F~~lw~asl~Ff~~N~~iL~~~I 259 (259)
T PF05007_consen 232 LGKNTFLPLWLASLVFFIANVWILGQII 259 (259)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7777776 9999999999999999874
No 6
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.41 E-value=5.3e-05 Score=71.91 Aligned_cols=172 Identities=15% Similarity=0.114 Sum_probs=108.5
Q ss_pred cccchHHHHHHHhhhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccch
Q psy10442 63 FHESPLILHMFKFIIGNDNPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNV 142 (430)
Q Consensus 63 yh~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (430)
|.|||..++++.|..-. .+.....++.+..+++.....+...+. .+.+++ + ..
T Consensus 1 ~~YpP~~~~l~~p~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~-------------~~ 53 (241)
T PF09594_consen 1 YVYPPLFALLFAPLALL----PFPVAFLLWALLSLAALALAVRLLLRR-------LGRRKP---P-------------GR 53 (241)
T ss_pred CcCcHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCcCcc---h-------------hH
Confidence 68999999999997542 134566777766666665554443221 000000 0 01
Q ss_pred hhHH-HHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccchhh
Q psy10442 143 PKYV-ALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKKSWR 221 (430)
Q Consensus 143 ~~~~-~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~~~~ 221 (430)
...+ .....++|. ...-..|+.|.+..++++.+++...|+|...||+++|+++-.|++|+.+.+.++. .+ ++|
T Consensus 54 ~~~~~~~~~~~~p~-~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll~--~r---~~r 127 (241)
T PF09594_consen 54 ALLLALLLLAFPPV-LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALLI--RR---RWR 127 (241)
T ss_pred HHHHHHHHHHHHHH-HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHh--cc---hHH
Confidence 2222 234466666 7777778999999999999999999999999999999999999999999874333 22 333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCchhHHhhhhheeec-cCCCCCchh
Q psy10442 222 LFLAGFLLCYSGFLYFCLGLMN-QDTSFLAATYGFQLTV-PNLQPNIGL 268 (430)
Q Consensus 222 ~~~~~~~~~~~~L~~~sy~~~g-~s~~Fl~~ty~~~l~~-~Dl~pN~gl 268 (430)
.... .+.+.+....+.+...| +.|+...++...+-.+ .+...|.+.
T Consensus 128 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~ 175 (241)
T PF09594_consen 128 AALW-AAATAAVLFALPFLLFGPDSWQDFLSVLFQNGSRILGGWSNQSL 175 (241)
T ss_pred HHHH-HHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccccccccch
Confidence 3333 24444444444666655 2344444444444332 566777773
No 7
>PRK13375 pimE mannosyltransferase; Provisional
Probab=97.92 E-value=0.034 Score=57.93 Aligned_cols=285 Identities=12% Similarity=0.051 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHhhccchhhhccceeeeccCCchhhHhHHHHHHhCCCCCCCCC----------ccccchHHHHHHHhhh
Q psy10442 8 QFVISTLLRYWLCHSEFKSLLQDRVEISNPINAWKNLVEGVTLMKDQVNPYDGD----------IFHESPLILHMFKFII 77 (430)
Q Consensus 8 ~~~~~~~lRl~L~~~~~~~~l~~~~evsTp~tsy~~~~Eg~~l~~~g~sPY~~~----------tyh~tPLLl~ll~~~~ 77 (430)
+++++++.|++-.+. .++ . .+..|.++.++|..-+.+|.|-||.+ -|.|||.-+.++.|+.
T Consensus 23 ~~~~~~~~~~~~~~~-~~~----~----~~~vDl~VYr~g~~~~~~g~~LYd~~~~~~~~~~~LpFtYPPfaallf~PLa 93 (409)
T PRK13375 23 LLVLSVAARLAWTYL-APN----G----ANFVDLHVYVGGAAALDHPGTLYDYVYADQTPDFPLPFTYPPFAALVFYPLH 93 (409)
T ss_pred HHHHHHHHHHHHhcc-cCC----C----CCCccHHHHHHhHHHHccCCcccCccccccCCCCCCCCCCCcHHHHHHHHHH
Confidence 566778888864330 111 1 12238999999999999999999854 3899999999999976
Q ss_pred cCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhh-HHHHHHhhchhH
Q psy10442 78 GNDNPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPK-YVALAYLYNPFS 156 (430)
Q Consensus 78 ~~~~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~yLfNP~t 156 (430)
-.. ......+|.+.-+..-+...++..+. -+ .+. ..+.... ..+..-.+-|..
T Consensus 94 lLp----~~~a~~l~~~~~~~al~~~v~~~~r~-------l~-~~~--------------~~~~~a~~~~~~~l~~ePv~ 147 (409)
T PRK13375 94 LLP----FGVVAFLWQLATIAALYGVVRISQRL-------LG-GGA--------------GGHRVAMLWTAVGIWLEPVR 147 (409)
T ss_pred hcc----HHHHHHHHHHHHHHHHHHHHHHHHHH-------hc-ccc--------------cchhHHHHHHHHHHHhHHHH
Confidence 431 12345566655444333332222110 00 000 0000110 111111245553
Q ss_pred HHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Q psy10442 157 ILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKKSWRLFLAGFLLCYSGFLY 236 (430)
Q Consensus 157 i~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~~~~~~~~~~~~~~~~L~~ 236 (430)
-...-++ ++.++.++.+....++|...+|+++|++.=.|+.|.+. ++++...++ +| .......++++...
T Consensus 148 ~tl~~GQ----IN~lL~~Lv~~dll~~r~~~aGvliGLAaaIKlTPavf--~l~lL~~Rr---Wr-a~~~A~~t~~~~~~ 217 (409)
T PRK13375 148 STFDYGQ----INVFLMLAVLYAVYSSRWWLSGLLVGLAAGVKLTPAIT--GLYFLGARR---WA-AAAFSAVVFLATVG 217 (409)
T ss_pred HHHHhCc----HHHHHHHHHHHHHhcCCccHHHHHHHHHHHhhhhhHHH--HHHHHHhCH---HH-HHHHHHHHHHHHHH
Confidence 3333222 12223333333445677789999999999999999884 445544332 22 12245677777888
Q ss_pred HHHHhccC-CchhHHhhhhhe--eeccCCCCCchhhHHHHHhhhhhH-HHHHHHHHhHHHHHHHHHHHHhhh--ccchHH
Q psy10442 237 FCLGLMNQ-DTSFLAATYGFQ--LTVPNLQPNIGLFWYFFTEMFEHF-RVLFIVAFQINSIFLYVLPLTLRL--YKEPVL 310 (430)
Q Consensus 237 ~sy~~~g~-s~~Fl~~ty~~~--l~~~Dl~pN~gl~WYff~emF~~f-~~ff~~vfq~~~~~~~v~pl~ir~--~~~p~~ 310 (430)
+++.+.|+ +|+|..++...- +.-.|...|=|+-=- ...+..+- ..-.......-. ...+.-...|- +.|+.-
T Consensus 218 lg~~~~p~~s~~ywt~~l~~~~riG~~~~~~NqSl~G~-l~Rl~g~~~~~~~~~~~~~~v-~a~~~~~awr~~~~~~~~~ 295 (409)
T PRK13375 218 VSYLVVGDQARYYFTDLLGDADRVGPIGTSFNQSWRGA-ISRILGHDAGFGPLVLAAIAV-TAVLALLAWRALGRSDRLG 295 (409)
T ss_pred HHHHHcCccHHHHHHHHhccccccCCccccccchHHHH-HHHHcCCCchHHHHHHHHHHH-HHHHHHHHHHhccCcchhH
Confidence 88888764 588887765442 122344455554321 11221111 111111111111 11111112332 235555
Q ss_pred HHHHHHHHHHhccccccchhhHHHHHHhh
Q psy10442 311 VAICLTGLAAVFKSYPCVGDIALYLALMP 339 (430)
Q Consensus 311 ~~~~~~~~~~~Fk~ypT~~d~~~~lsLLP 339 (430)
++.+.......-.||-=+-|..|..-++.
T Consensus 296 al~~~~l~~lLvSP~SW~HHwVWlvp~i~ 324 (409)
T PRK13375 296 SLLVVQLFGLLLSPISWTHHWVWVVPLMI 324 (409)
T ss_pred HHHHHHHHhHHhCCcchhhhHHHHHHHHH
Confidence 55444444567788888889998765443
No 8
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=97.74 E-value=0.011 Score=62.08 Aligned_cols=183 Identities=14% Similarity=0.149 Sum_probs=105.5
Q ss_pred HHHHHhhchhHHHhhc-ccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhh--cccc--h-
Q psy10442 146 VALAYLYNPFSILNCI-CLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFH--QYKK--S- 219 (430)
Q Consensus 146 ~~~~yLfNP~ti~~~~-~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~--~~~~--~- 219 (430)
...++.+||+++.--+ +.=-|.+--.+++..++.+.+|+...+++.+++++-.|.-+++.+ |+..... +.++ +
T Consensus 198 AlWL~~~NPLviihlvgg~HnealM~gl~l~gl~~~~r~~~~~g~vli~~a~~VK~~a~l~L-pf~~~~~~~~~~~~~~~ 276 (470)
T TIGR03459 198 ALWLGVLNPLVVIHLIGGMHNEMLMVGLVSAGILLALKRRPVAGIALIAVAVALKATAGIAL-PFVVWIWVAHVAGRLAY 276 (470)
T ss_pred HHHHHHcCchhhhhhhcchhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHhcccccc
Confidence 4445689999999444 334567777888888888999999999999999999999888774 7765442 1100 0
Q ss_pred ---------hhH---HHH-------HHHHHHHHHHHHHHHhccCCchhHHhhhhheeeccCCCCCchhhHHHHH------
Q psy10442 220 ---------WRL---FLA-------GFLLCYSGFLYFCLGLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFT------ 274 (430)
Q Consensus 220 ---------~~~---~~~-------~~~~~~~~L~~~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~------ 274 (430)
.++ ... +++.+++.... ..|-++.++.+-= +|+-..-||-..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~a~~t~----~sG~G~GWi~al~---------~~~~v~~wls~~t~lg~~ 343 (470)
T TIGR03459 277 AAGKALPDLWRRVGTFVAAALVGVLVFVAVFALITA----AAGVGWGWLTALS---------GNSKVINPLALPSLVASV 343 (470)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCcchHhhcC---------CCCeeecCCChHHHHHHH
Confidence 111 111 12223333333 3355566663311 222222344331
Q ss_pred -----hhhh---hHHHHHHHHHhHHHHHHHH---HHHHhhhc---cchHHHHHHHHHHHHhccccccchhhHHHHHHhhh
Q psy10442 275 -----EMFE---HFRVLFIVAFQINSIFLYV---LPLTLRLY---KEPVLVAICLTGLAAVFKSYPCVGDIALYLALMPL 340 (430)
Q Consensus 275 -----emF~---~f~~ff~~vfq~~~~~~~v---~pl~ir~~---~~p~~~~~~~~~~~~~Fk~ypT~~d~~~~lsLLPl 340 (430)
+.+. |+...-...=.+.. .+.+ +-+-.|++ ++|...+-+-....++|+|+-=-=|..|-+.++..
T Consensus 344 ~~~~~~l~g~~~~~~avl~v~R~ig~-~v~~~~l~~~w~~~~~~~~~~v~g~g~a~~~~vll~Pvv~PWY~lW~l~~la~ 422 (470)
T TIGR03459 344 IEPVGSLFNDDLDFNAVVDVIRPISM-VIMLLGLVATWWLFRHDERAAVTGTAAAYAIAVVFNPVTLPWYYTWPLALAAT 422 (470)
T ss_pred HHHHHHHccCCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHcchhhhHHHHHHHHHHHH
Confidence 2222 33322111111111 2222 12223443 78999999999999999998877777777777765
Q ss_pred hhh
Q psy10442 341 CKY 343 (430)
Q Consensus 341 ~~~ 343 (430)
+.+
T Consensus 423 ~a~ 425 (470)
T TIGR03459 423 FAQ 425 (470)
T ss_pred cCC
Confidence 543
No 9
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.18 E-value=0.012 Score=51.73 Aligned_cols=120 Identities=20% Similarity=0.284 Sum_probs=88.1
Q ss_pred cchHHHHHHHhhhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhh
Q psy10442 65 ESPLILHMFKFIIGNDNPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPK 144 (430)
Q Consensus 65 ~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (430)
+||+..++........++ ++....+.-.++-.++.+.++++.|+. .+ + ..+.
T Consensus 2 ~pPl~~~~~~~~~~l~G~-~~~~~~~~~~l~~~~~~~~~y~i~r~~-------~~-~-------------------~~a~ 53 (159)
T PF13231_consen 2 HPPLYFLLLALFFKLFGD-SVWALRLFNILFSLLTLLLIYLIARRL-------FG-R-------------------RAAL 53 (159)
T ss_pred CChHHHHHHHHHHHHhCc-CHHHHHHHHHHHHHHHHHHHHHHHHHH-------CC-c-------------------hHHH
Confidence 689988888775554322 344567778888899999999998753 11 1 1355
Q ss_pred HHHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHc----Cc---hhHHHHHHHHHhhhchhhHHHHHHHHHH
Q psy10442 145 YVALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVT----QK---PILSSIALTLTVQQNIYPITLLVPACVH 212 (430)
Q Consensus 145 ~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~----~~---~~~a~~~lala~~~~~YPiil~~P~~l~ 212 (430)
..+.++...|..+.-+....+|....++.+++++...+ ++ ...++++.|++..-|..-+++.+++.++
T Consensus 54 ~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~ 128 (159)
T PF13231_consen 54 IAALLLALSPMFIFYSASARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLY 128 (159)
T ss_pred HHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999888889999999999999997764 22 3578888888888887666665555543
No 10
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=97.17 E-value=0.00064 Score=71.62 Aligned_cols=102 Identities=13% Similarity=0.145 Sum_probs=77.4
Q ss_pred hhchhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccc--hhhHHHHHHH
Q psy10442 151 LYNPFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKK--SWRLFLAGFL 228 (430)
Q Consensus 151 LfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~--~~~~~~~~~~ 228 (430)
--+| -+.-+...+.|.+..++++++..+ +||+.+||+++|+++-+|.+|.+.++|++..+.|+.. +.++.+..++
T Consensus 205 ~as~-~v~f~v~~~~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K~~P~Ivl~pll~~~~keyg~~~a~~f~~~aa 281 (536)
T COG5650 205 AASP-LVGFAVFTVFDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFKQIPLIVLPPLLYLIYKEYGLRPAIKFIATAA 281 (536)
T ss_pred eccc-eEEEEEecchhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhhcCchhhHHHHHHHHHHhcCcchHHHHHHHHH
Confidence 4577 566789999999999999999888 9999999999999999999999999999988876533 2211122333
Q ss_pred HHHHHHHHHHHHhccCCchhHHhhhhhee
Q psy10442 229 LCYSGFLYFCLGLMNQDTSFLAATYGFQL 257 (430)
Q Consensus 229 ~~~~~L~~~sy~~~g~s~~Fl~~ty~~~l 257 (430)
++..... .=+.++| .++|.++..+++-
T Consensus 282 ~t~lLvN-~PfiI~~-P~aw~~sil~~~~ 308 (536)
T COG5650 282 ITWLLVN-LPFIILG-PRAWVESILLFAR 308 (536)
T ss_pred HHHHHHc-CceEEec-hHHHHHHHHhHHh
Confidence 3333332 3355666 7999999888886
No 11
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=95.97 E-value=0.49 Score=50.01 Aligned_cols=148 Identities=17% Similarity=0.093 Sum_probs=94.5
Q ss_pred ccCCchhhHhHHHHHHhCCCCCCCCC------ccccchHHHHHHHhhhcCCCcccccchhHHHHHHHH---HHHHHHHHH
Q psy10442 36 NPINAWKNLVEGVTLMKDQVNPYDGD------IFHESPLILHMFKFIIGNDNPYVQQSIPFIFILCDL---LSAILLYYM 106 (430)
Q Consensus 36 Tp~tsy~~~~Eg~~l~~~g~sPY~~~------tyh~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dl---l~a~ll~~i 106 (430)
++--|.-.+.++.+...+|.-|++.- ..|.+|++..+ .|+.... |+. ..+.++=++ +.++.++++
T Consensus 7 ~~~~DlGif~Q~~~~~~~g~~~~~t~~~~~~lg~HfsPil~ll-~Ply~l~----Ps~-~tLli~Qal~la~~~~pl~~l 80 (449)
T PF09852_consen 7 SPSFDLGIFDQAIWSYAHGRAPISTIEGQNHLGDHFSPILYLL-APLYRLF----PSP-LTLLIVQALLLALGAIPLYRL 80 (449)
T ss_pred CCchhHHHHHHHHHHHhCCCCceecccccccccccchHHHHHH-HHHHHHh----CCH-HHHHHHHHHHHHHHHHHHHHH
Confidence 44458999999999999999666544 68999987765 4655433 332 233333333 344677777
Q ss_pred HHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhccc-ChhHHHHHHHHHHHHHHHcCch
Q psy10442 107 AQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICL-TSTVFANFFLCLFFFAFVTQKP 185 (430)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~-st~~~~~~~vl~~l~~~~~~~~ 185 (430)
+|+. ..++ ..+..++++|++||.....+... =.+++..-+++.++++..+||.
T Consensus 81 ar~~-------~~~~-------------------~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~ 134 (449)
T PF09852_consen 81 ARRR-------LLSR-------------------RLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRW 134 (449)
T ss_pred HHHH-------cCCc-------------------HHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcH
Confidence 7642 1111 14567889999999988764422 3344444567788888888888
Q ss_pred hHHHHHHHHHhhhc--hhhHHHHHHHHHHhhc
Q psy10442 186 ILSSIALTLTVQQN--IYPITLLVPACVHFHQ 215 (430)
Q Consensus 186 ~~a~~~lala~~~~--~YPiil~~P~~l~l~~ 215 (430)
..+.++.++..-.| ....+..+-+.+.+.+
T Consensus 135 ~~~~~~~ll~llvKEd~~l~v~~~gl~~~~~~ 166 (449)
T PF09852_consen 135 RLFILWALLLLLVKEDLGLTVAGIGLYLLLRR 166 (449)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhC
Confidence 77777776666666 5445555555555544
No 12
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=95.55 E-value=0.21 Score=47.99 Aligned_cols=93 Identities=20% Similarity=0.229 Sum_probs=69.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhcccChh
Q psy10442 87 SIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICLTST 166 (430)
Q Consensus 87 ~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~st~ 166 (430)
..+..=.++-.++..+++.++|+. ..++ ..+...+.+++++|..+..+....+|
T Consensus 84 ~~R~~~~l~~~~~~~l~y~~~~~~-------~~s~-------------------~~al~aa~l~~~~~~~~~~sr~~~~D 137 (245)
T PF02366_consen 84 AARLPSALFGALTVPLVYLILRRL-------FGSR-------------------RAALLAALLLALDPSLIVQSRYALLD 137 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------cCCh-------------------hHHHHHHHHHHHhhHHHHHHHHHhhH
Confidence 345666677778888888777642 1111 14566788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC------------chhHHHHHHHHHhhhchhhHHHH
Q psy10442 167 VFANFFLCLFFFAFVTQ------------KPILSSIALTLTVQQNIYPITLL 206 (430)
Q Consensus 167 ~~~~~~vl~~l~~~~~~------------~~~~a~~~lala~~~~~YPiil~ 206 (430)
+...+++++++++..+. ...++++++|+++--| +|..++
T Consensus 138 ~~l~~f~~la~~~~~~~~~~~~~~~~~~~~~~l~gi~lGla~~~K-~~~~~~ 188 (245)
T PF02366_consen 138 SILLFFILLAIYCLLRWYRYQPFRRKWWLWLLLAGIALGLAILTK-GPGLLL 188 (245)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHhc-hhHHHH
Confidence 99999999999987655 2457889999999998 554443
No 13
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=94.97 E-value=0.23 Score=51.43 Aligned_cols=134 Identities=15% Similarity=0.177 Sum_probs=93.2
Q ss_pred CCCCCccccchHHHHHHHhhhcCCCc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhh
Q psy10442 57 PYDGDIFHESPLILHMFKFIIGNDNP-YVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILIN 135 (430)
Q Consensus 57 PY~~~tyh~tPLLl~ll~~~~~~~~~-~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (430)
-+..+.--|+|+..+-..-+.+...+ .....+++.=+..|...|..+|++.|..- ..++
T Consensus 87 ~~k~~~~~~~p~~~y~i~ii~~L~~~~~~~l~~~l~s~~~~~~~ay~lY~~tk~~y----~~~~---------------- 146 (420)
T COG5542 87 VLKSHFADYFPLYLYWIRIINKLLSSLYFILAIKLFSNIADFVAAYFLYKITKLRY----GLGS---------------- 146 (420)
T ss_pred hhhccccccCchHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----ccch----------------
Confidence 45556666777776654432222101 00125667777999999999999886421 1111
Q ss_pred cccccchhhHHHHHHhhchhHHHhhcc-cChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhh
Q psy10442 136 IEDLVNVPKYVALAYLYNPFSILNCIC-LTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFH 214 (430)
Q Consensus 136 ~~~~~~~~~~~~~~yLfNP~ti~~~~~-~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~ 214 (430)
.+......+-++|-.|..++. |.||++-.++..+.+|+..+++..-|++++|+|+-.|.--+.+++=+..-+-
T Consensus 147 ------~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~l~Rsngi~~~p~fl~~~i 220 (420)
T COG5542 147 ------MARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALATLFRSNGIFLSPLFLIPLI 220 (420)
T ss_pred ------hhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 233444567888999997665 5799999999999999999999999999999999999988777644444443
Q ss_pred cc
Q psy10442 215 QY 216 (430)
Q Consensus 215 ~~ 216 (430)
+.
T Consensus 221 k~ 222 (420)
T COG5542 221 KN 222 (420)
T ss_pred hh
Confidence 33
No 14
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=94.36 E-value=9.5 Score=41.59 Aligned_cols=141 Identities=17% Similarity=0.096 Sum_probs=81.7
Q ss_pred hhHhHHHHHHhCCC---CCCC-CC-ccccchHHHHHHHhhhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10442 42 KNLVEGVTLMKDQV---NPYD-GD-IFHESPLILHMFKFIIGNDNPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQ 116 (430)
Q Consensus 42 ~~~~Eg~~l~~~g~---sPY~-~~-tyh~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~ 116 (430)
-|.-|.++-+-+++ .|+- |. -++.||+.-|+...-....+ .+....++.-.++=++++++.+.++|+..
T Consensus 34 ~ryA~iareMl~sGdWlvP~~~g~~y~eKPPL~yWl~Als~~LFG-~~~~a~RLpsaL~~~lt~llvy~larrl~----- 107 (552)
T PRK13279 34 TRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSIGQWLFG-DNNFGVRFGSVFSTLLSALLVYWLALRLW----- 107 (552)
T ss_pred HHHHHHHHHHHHhCCcCccccCCCcCCCCCcHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 45556666444443 4644 33 34668887776543222211 11223344444555667777777776431
Q ss_pred HHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhcccChhHHHHHHHHHHH---HHHHc----C-c---h
Q psy10442 117 IEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICLTSTVFANFFLCLFF---FAFVT----Q-K---P 185 (430)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l---~~~~~----~-~---~ 185 (430)
+++ ..+...+.+++.+|.....+.-...|....+++.+++ |...+ + + .
T Consensus 108 --~~r-------------------~~AllAaLIlls~~~v~~~g~~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~ 166 (552)
T PRK13279 108 --RDR-------------------RTALLAALIYLSLFLVYGIGTYAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGY 166 (552)
T ss_pred --CCc-------------------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHH
Confidence 111 1345677888999998887777778888777776553 44433 1 1 2
Q ss_pred hHHHHHHHHHhhhchhhHHHHHHHH
Q psy10442 186 ILSSIALTLTVQQNIYPITLLVPAC 210 (430)
Q Consensus 186 ~~a~~~lala~~~~~YPiil~~P~~ 210 (430)
...|+++|++.--| .|+.+++|..
T Consensus 167 lllGla~Glg~LTK-G~ial~lP~l 190 (552)
T PRK13279 167 LLLGLACGMGFMTK-GFLALAVPVI 190 (552)
T ss_pred HHHHHHHHHHHHhc-chHHHHHHHH
Confidence 45677888888888 5555566643
No 15
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=92.17 E-value=19 Score=38.66 Aligned_cols=140 Identities=22% Similarity=0.213 Sum_probs=89.4
Q ss_pred chhhHhHHHHHHhCCCC---CC--CCCccccchHHHHHHHhhhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10442 40 AWKNLVEGVTLMKDQVN---PY--DGDIFHESPLILHMFKFIIGNDNPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQM 114 (430)
Q Consensus 40 sy~~~~Eg~~l~~~g~s---PY--~~~tyh~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~ 114 (430)
|=.+..|.++-+.++.| |. .-..+..||+..|+-.......+ .+.....+.-..+=.+++.+.+.++|+..
T Consensus 34 de~~~~~~~~~m~~s~~w~~~~~~g~~~~~kPPl~~Wl~a~~~~lfG-~~~~~~rl~~~l~~~~~~~l~y~l~k~l~--- 109 (535)
T COG1807 34 DEARYAEIAREMLESGDWFTPQLLGLPYFEKPPLVYWLQALSYLLFG-VNEWSARLPSALAGALTALLVYWLAKRLF--- 109 (535)
T ss_pred CchhHHHHHHHHHHcCCCcceeeCCccccCCCcHHHHHHHHHHHHcC-cchHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 44456666666665554 33 33566778888888765333321 11222233333334466667776665421
Q ss_pred HHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHcC-----c---hh
Q psy10442 115 VQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVTQ-----K---PI 186 (430)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~-----~---~~ 186 (430)
+ ++ .+...+.+++.+|..+..+...++|....+++++++++..+. + ..
T Consensus 110 ----~-~~-------------------~a~~aali~~~~p~~~~~~~~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~l 165 (535)
T COG1807 110 ----G-RL-------------------AALLAALILLLTPLFFLIGRLALLDAALAFFLTLALALLYLALRARGKLKWLL 165 (535)
T ss_pred ----c-cH-------------------HHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHhcCcccHHH
Confidence 0 11 356678889999999999999999999999999888866432 2 25
Q ss_pred HHHHHHHHHhhhchhhHHHHHH
Q psy10442 187 LSSIALTLTVQQNIYPITLLVP 208 (430)
Q Consensus 187 ~a~~~lala~~~~~YPiil~~P 208 (430)
+.++++|++..-|- |+.+.+|
T Consensus 166 ~~gl~lGL~~ltKg-~~~~~l~ 186 (535)
T COG1807 166 LLGLALGLGFLTKG-PGALLLP 186 (535)
T ss_pred HHHHHHHHHHHHhc-hHHHHHH
Confidence 67899999988885 4444444
No 16
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=90.62 E-value=25 Score=37.15 Aligned_cols=58 Identities=21% Similarity=0.286 Sum_probs=46.0
Q ss_pred hhHHHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHc----Cc---hhHHHHHHHHHhhhch
Q psy10442 143 PKYVALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVT----QK---PILSSIALTLTVQQNI 200 (430)
Q Consensus 143 ~~~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~----~~---~~~a~~~lala~~~~~ 200 (430)
....+.+-.++|..+..+--..+|+...++.++++++..+ ++ ...+++++|+++.-|-
T Consensus 100 al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~~~gLa~ltKg 164 (439)
T TIGR03663 100 VLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAASALALAFTSKE 164 (439)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 3445556679999999999999999999999999987754 22 3578888998888873
No 17
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=89.54 E-value=3.8 Score=43.35 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=58.2
Q ss_pred hhHHHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHH
Q psy10442 143 PKYVALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVH 212 (430)
Q Consensus 143 ~~~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~ 212 (430)
+...+.++.+||-++.- ++.=||++.+++....++...+++...|+++.|+|+-.+-.=++.+.++...
T Consensus 144 a~~a~ll~~~~PasiF~-sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~ 212 (443)
T PF04188_consen 144 ALLAALLFIFSPASIFL-SAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYE 212 (443)
T ss_pred HHHHHHHHHHccHHHHh-hcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45577889999999865 5778899999999999999999999999999999999887777776665543
No 18
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=89.35 E-value=9.8 Score=40.69 Aligned_cols=163 Identities=17% Similarity=0.147 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHhhccchhhhccceeeeccCCchhhHhHHHHHHhCCCCCCCCCcc---ccchHHHHHHHhhhcCCCcc
Q psy10442 7 VQFVISTLLRYWLCHSEFKSLLQDRVEISNPINAWKNLVEGVTLMKDQVNPYDGDIF---HESPLILHMFKFIIGNDNPY 83 (430)
Q Consensus 7 ~~~~~~~~lRl~L~~~~~~~~l~~~~evsTp~tsy~~~~Eg~~l~~~g~sPY~~~ty---h~tPLLl~ll~~~~~~~~~~ 83 (430)
.++++++++|+..+. .. + .+|..|+.++.|+|.. .+.+-+++--. |+.|+++. +..+.+..++.
T Consensus 70 ~l~~~~~i~ql~~i~-----~~----~-~~p~~D~~~v~~~A~~--~~~~~~~~Y~~~yPnn~g~~l~-~~~l~kifg~~ 136 (483)
T TIGR03766 70 VIFILLLILQLILVT-----AL----H-PLIGWDAGAVHTAATK--SNESSISNYFSRNPNNLFLLLF-MHFLYKLFGET 136 (483)
T ss_pred HHHHHHHHHHHHHHH-----Hc----C-CCcCcCHHHHHHHHhc--CCCcccCceeeECCchHHHHHH-HHHHHHHhCcc
Confidence 345556777888865 11 1 1467799999988872 22223333222 34455543 23333322110
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhc-hhHHHhhcc
Q psy10442 84 VQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYN-PFSILNCIC 162 (430)
Q Consensus 84 ~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfN-P~ti~~~~~ 162 (430)
+-...+++=+++=.++++++++++|.... ++ .....+.+|.+. |++.....-
T Consensus 137 ~~~~~~llNil~~~~si~liy~i~k~lf~--------~~-------------------~a~~a~~l~~l~~~~~~y~~~~ 189 (483)
T TIGR03766 137 SWLFFDVVNIVLVDLSALILYKAVKKVFN--------KK-------------------KAFVALYLFVLLLALSPYILIP 189 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------ch-------------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 01122455555555667778877764311 11 122233333333 344443333
Q ss_pred cChhHHHHHHHHHHHHHHH---c-Cc-------hhHHHHHHHHHhhhchhhHHHHHHHH
Q psy10442 163 LTSTVFANFFLCLFFFAFV---T-QK-------PILSSIALTLTVQQNIYPITLLVPAC 210 (430)
Q Consensus 163 ~st~~~~~~~vl~~l~~~~---~-~~-------~~~a~~~lala~~~~~YPiil~~P~~ 210 (430)
-|. ...-+++.+++++.. + ++ ...+|+++|++...|+--++.++.+.
T Consensus 190 Ysd-~~~l~~~~l~l~~~~~~~~~~~~~~~~~~~Il~gillal~~~iKp~~iI~liA~~ 247 (483)
T TIGR03766 190 YTD-TWVLPFVSLFLFLYTVISKKTDLRKKIALSILLGVLLAIAYFIKPSAIIFVIAIF 247 (483)
T ss_pred Hhh-hHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 333 333344444433221 2 11 25889999999999987776665544
No 19
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=81.88 E-value=37 Score=34.84 Aligned_cols=127 Identities=16% Similarity=0.155 Sum_probs=78.2
Q ss_pred HHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcccchhhHHHH
Q psy10442 146 VALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQYKKSWRLFLA 225 (430)
Q Consensus 146 ~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~~~~~~~~~~ 225 (430)
.+.+=.+.|.--+.+.--=-|+=..++..++.|++..||...|++++|+|.-.|.--.. +.|++.+.....+..|+.+.
T Consensus 189 aA~~~alDp~l~amg~VAMLDIhvaFFtaL~~~fl~~~R~l~sgiAlGLAAs~K~SG~~-vfpil~~~~l~~~~~k~~~i 267 (438)
T COG4346 189 AALLAALDPLLRAMGGVAMLDIHVAFFTALFMYFLANDRPLWSGIALGLAASVKLSGAF-VFPILWYAILKENDLKERFI 267 (438)
T ss_pred HHHHHhhCcHHHHhcchhHHHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHhhcccc-hHHHHHHHHHhhhhHHHHHH
Confidence 34444688888777777777888999999999999999999999999998888865544 56766544322112222221
Q ss_pred ----HHHHHHHHHHHHHHHhccCCchhHHhh---hhheeeccCCCCCchhhHHHHH
Q psy10442 226 ----GFLLCYSGFLYFCLGLMNQDTSFLAAT---YGFQLTVPNLQPNIGLFWYFFT 274 (430)
Q Consensus 226 ----~~~~~~~~L~~~sy~~~g~s~~Fl~~t---y~~~l~~~Dl~pN~gl~WYff~ 274 (430)
+-...+...-.---.-+| ==.|++|. ...|.+.+--.|--+..|=.|.
T Consensus 268 agilip~~vfll~~~Pii~~~G-~~~Wl~E~i~~~sWh~Tsr~~~P~~st~w~Wfi 322 (438)
T COG4346 268 AGILIPALVFLLPEIPIIKAIG-FIPWLEEFIISLSWHTTSRPPGPQASTPWDWFI 322 (438)
T ss_pred hhhhHhhHHHHhcccHHHHHhC-chHHHHHHHHHceeeeccCCCCCCCCChHHHHh
Confidence 111111111111111123 11344443 5678888888898888876543
No 20
>KOG2515|consensus
Probab=78.70 E-value=89 Score=33.44 Aligned_cols=160 Identities=15% Similarity=0.232 Sum_probs=98.7
Q ss_pred HHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhc-hhhHHHHHHHHHHhhcccchhhHHH
Q psy10442 146 VALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQN-IYPITLLVPACVHFHQYKKSWRLFL 224 (430)
Q Consensus 146 ~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~-~YPiil~~P~~l~l~~~~~~~~~~~ 224 (430)
..++=++|+=....|++.=.+++.-.+..+++-+-...|...|-.+.++++-+. ++.+++.+|+++-+-..++.+|..+
T Consensus 129 ~i~f~~fssGmF~aStafLPSSF~M~~~~~al~a~l~~n~~~av~~~a~gailGWPFsa~l~lPi~~~lll~k~r~k~~F 208 (568)
T KOG2515|consen 129 WIIFLLFSSGMFHASTAFLPSSFAMYLTVLALGAWLTENYTKAVAYVAIGAILGWPFSALLGLPILLELLLLKHRFKSTF 208 (568)
T ss_pred HHHHHHhcccceeeechhcchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccHHHHHHhhHHHHHHHHHhccHHHHH
Confidence 334447898888889988888888888888877777788888888888888888 8889999997655544334455433
Q ss_pred H-HHHHHHHHHHHH----HHHhccCCchhHH-hhhhheeeccCCCCCc---hhhHHHHHhhhhhHHHHHHHHHhHHHHHH
Q psy10442 225 A-GFLLCYSGFLYF----CLGLMNQDTSFLA-ATYGFQLTVPNLQPNI---GLFWYFFTEMFEHFRVLFIVAFQINSIFL 295 (430)
Q Consensus 225 ~-~~~~~~~~L~~~----sy~~~g~s~~Fl~-~ty~~~l~~~Dl~pN~---gl~WYff~emF~~f~~ff~~vfq~~~~~~ 295 (430)
. -+.+++..+... -...|| -|.+.. +-..|- ....+.||+ -+|||.+...|..|.--+....+..| +.
T Consensus 209 ~~~~l~~~~~~~v~~i~~Ds~yyg-kl~~a~lNIv~YN-V~~~~gP~iyGtEP~~yYi~NlflNfNi~~~lA~~~~p-~~ 285 (568)
T KOG2515|consen 209 ITWFLCILILLLVPVIVTDSYYYG-KLTFAPLNIVLYN-VLTGHGPNIYGTEPWYYYIINLFLNFNIVFLLAMLLGP-FL 285 (568)
T ss_pred HHHHHHHHHHhccceEEEeehhhc-cceeeeeeeEEEe-eccCCCCCccccCchHHHHHhhhccccHHHHHHHHhch-HH
Confidence 3 233333322222 122234 333321 111121 244555876 35777778888888766666666555 55
Q ss_pred HHHHHHhhhccch
Q psy10442 296 YVLPLTLRLYKEP 308 (430)
Q Consensus 296 ~v~pl~ir~~~~p 308 (430)
.+-++-++...|-
T Consensus 286 li~~l~~w~~~ds 298 (568)
T KOG2515|consen 286 LIYFLRVWPKWDS 298 (568)
T ss_pred HHHHHhhhhhhhc
Confidence 5555545544333
No 21
>KOG2552|consensus
Probab=75.94 E-value=4.9 Score=41.21 Aligned_cols=102 Identities=11% Similarity=-0.041 Sum_probs=58.5
Q ss_pred CCCchhhHHHHHhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhccccccchhhHHHHHHhhhhh
Q psy10442 263 QPNIGLFWYFFTEMFEHFRVLFIVAFQINSIFLYVLPLTLRLYKEPVLVAICLTGLAAVFKSYPCVGDIALYLALMPLCK 342 (430)
Q Consensus 263 ~pN~gl~WYff~emF~~f~~ff~~vfq~~~~~~~v~pl~ir~~~~p~~~~~~~~~~~~~Fk~ypT~~d~~~~lsLLPl~~ 342 (430)
.+|.++|||++++|++. +.+.+ -.|..|++||--.-+...+.--.+-...|+.++-+.++++
T Consensus 228 i~s~li~~~~~~~l~~~--------~~f~~-~~ygfilsi~dl~Pniglfwyff~e~F~~f~~~flivf~~--------- 289 (388)
T KOG2552|consen 228 IFSVLIWSLYVLFLLSS--------WEFFK-RTYGFILSIEDLSPNIGLFWYFFAEMFEFFRNFFLIVFAY--------- 289 (388)
T ss_pred hHHHHHHHHHHHHHHHH--------HHHHh-hhccceeeHHhhCCCccHHHHHHHHHHHHHhhHHHHhhhh---------
Confidence 89999999999999887 22334 5566677777433233333322333333333333333311
Q ss_pred hhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10442 343 YLFPFMQQGFIVACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKR 408 (430)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~~L~p~~~~lWi~~~sgNaNF~~a~tLvf~~~~~~ll~d~i~~~l~~ 408 (430)
+ +.|...+-+|.+++|.-.+.+.-.-.++.++.+.+.+-.
T Consensus 290 ----------------~----------slgd~~lyls~~p~~~~~~~~~~~~f~~~~~~l~~~lL~ 329 (388)
T KOG2552|consen 290 ----------------I----------SLGDVALYLSLLPLFVNELKDMRYSFFIFCGYLGTSLLM 329 (388)
T ss_pred ----------------c----------chhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 0 556666666666777766666666666666655554443
No 22
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=74.40 E-value=1.5e+02 Score=32.96 Aligned_cols=77 Identities=12% Similarity=0.159 Sum_probs=45.1
Q ss_pred ccchHHHHHHHhhhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchh
Q psy10442 64 HESPLILHMFKFIIGNDNPYVQQSIPFIFILCDLLSAILLYYMAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVP 143 (430)
Q Consensus 64 h~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dll~a~ll~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (430)
-||||-.++...+....++. ....++...++=++.|...|...|+. .+ + ..+
T Consensus 3 FYpPL~yyl~a~l~~l~g~~-~~Ay~l~~~L~~~l~~~~~Y~~~R~~--------~~-~------------------~~A 54 (616)
T PF10131_consen 3 FYPPLPYYLGALLSLLFGNP-IVAYKLFIFLAFFLGGLGMYFLGRRL--------GR-R------------------KAA 54 (616)
T ss_pred eCCcHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHh--------cc-h------------------hHH
Confidence 36787766654433221111 12446666667677777777776642 11 1 146
Q ss_pred hHHHHHHhhchhHHH-hhcccChhHH
Q psy10442 144 KYVALAYLYNPFSIL-NCICLTSTVF 168 (430)
Q Consensus 144 ~~~~~~yLfNP~ti~-~~~~~st~~~ 168 (430)
.+.+++|++.|+-.. .-.||+-...
T Consensus 55 ~l~aiLyl~~py~l~~~y~rgni~e~ 80 (616)
T PF10131_consen 55 ILAAILYLFSPYHLRNIYWRGNIPET 80 (616)
T ss_pred HHHHHHHHHhHHHHHHHHhcchHHHH
Confidence 778899999998776 4555554433
No 23
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=71.14 E-value=24 Score=36.49 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhc
Q psy10442 165 STVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQ 215 (430)
Q Consensus 165 t~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~ 215 (430)
-|.+..+++-+++++.++++..++++.+++|+-.|..-..+++.+...+-+
T Consensus 129 ND~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~ 179 (368)
T PF05208_consen 129 NDCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQ 179 (368)
T ss_pred cHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 378888888899999999999999999999999999988888777655543
No 24
>KOG2647|consensus
Probab=56.24 E-value=30 Score=36.25 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=76.4
Q ss_pred HHHHHHhCCCCCCC-CCccccchHHHHHHHhhhcCCCcccccch---------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10442 46 EGVTLMKDQVNPYD-GDIFHESPLILHMFKFIIGNDNPYVQQSI---------PFIFILCDLLSAILLYYMAQSYMIQMV 115 (430)
Q Consensus 46 Eg~~l~~~g~sPY~-~~tyh~tPLLl~ll~~~~~~~~~~~~~~~---------~~lf~~~Dll~a~ll~~i~~~~~~~~~ 115 (430)
||.+.+..-.+=|. -+++-..||.=.....+.+..+|..+..+ ..+=+.+-+++|.+++++.+..
T Consensus 76 Da~~FL~iae~gy~fEh~~AF~pl~P~~v~~~~~~~~~~~~~l~~~~~~~i~~~~vn~~~f~la~~~Lyql~~~~----- 150 (444)
T KOG2647|consen 76 DAEYFLFIAEHGYLFEHELAFFPLFPFVVRLVTEVLRPIEPVLSLRSILLISAVLVNIFFFMLAAVALYQLTRII----- 150 (444)
T ss_pred hHHHHHHHHhhchHHhhhHHhccccHHHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 55554433333355 46777788877666655422222222221 1122234445555555554432
Q ss_pred HHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHH
Q psy10442 116 QIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLT 195 (430)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala 195 (430)
++ ++ +.....+.+|.|||=+|.-+++= +|++..++-+.-++...+|+...+.++++++
T Consensus 151 --~~-~~------------------k~s~~a~liFcfnPAsIF~ts~Y-SEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~ 208 (444)
T KOG2647|consen 151 --LH-DP------------------KISFYAALLFCFNPASIFLTAGY-SESLFALFSFLGILFLEKGRQFTGTLLFSLA 208 (444)
T ss_pred --hc-Ch------------------hHHhhhhheeEecchHhhhhHHh-hHHHHHHHHHHHHHHHhcCCccceehHHHHH
Confidence 11 10 13456778899999999876655 4677778888888888999887777877777
Q ss_pred hhhchh
Q psy10442 196 VQQNIY 201 (430)
Q Consensus 196 ~~~~~Y 201 (430)
.-.+-.
T Consensus 209 ~~~rSn 214 (444)
T KOG2647|consen 209 TLVRSN 214 (444)
T ss_pred HHHHhh
Confidence 666543
No 25
>COG3463 Predicted membrane protein [Function unknown]
Probab=51.56 E-value=3.3e+02 Score=29.00 Aligned_cols=131 Identities=14% Similarity=0.147 Sum_probs=83.6
Q ss_pred ccCCchhhHhHHHHHHhCCCCCCC-------CCccccchHHHHHHHhhhcCCCcccccchhHHHHHHHHHH---HHHHHH
Q psy10442 36 NPINAWKNLVEGVTLMKDQVNPYD-------GDIFHESPLILHMFKFIIGNDNPYVQQSIPFIFILCDLLS---AILLYY 105 (430)
Q Consensus 36 Tp~tsy~~~~Eg~~l~~~g~sPY~-------~~tyh~tPLLl~ll~~~~~~~~~~~~~~~~~lf~~~Dll~---a~ll~~ 105 (430)
|.+ |-..+....+.-.+|.==|. +-..|..|.+..+ .|+.... |. -..++..=|+.. ++.++.
T Consensus 35 ta~-DLGI~sq~l~~~~~Gk~~Y~t~~~~~~~f~vhfqpilfLl-yP~Y~l~----Ps-p~~Lll~Q~i~ials~~p~y~ 107 (458)
T COG3463 35 TAL-DLGIFSQSLYTTSHGKLFYNTVEFQLTHFGVHFQPILFLL-YPFYKLF----PS-PETLLLIQAIAIALSSLPIYL 107 (458)
T ss_pred eee-chHHHHHHHHHHhCCeeeccchhhhcccceeehhhHHHHH-HHHHHhC----Cc-HHHHHHHHHHHHHHhHHHHHH
Confidence 444 67777788888888763332 4457788876554 4555443 32 234444444444 356666
Q ss_pred HHHHHHHHHHHHHHhhhhhcchhhhhHhhhcccccchhhHHHHHHhhchhHHHh-hcccChhHHHHHHHHHHHHHHHcCc
Q psy10442 106 MAQSYMIQMVQIEKQNKHKYAKNITRILINIEDLVNVPKYVALAYLYNPFSILN-CICLTSTVFANFFLCLFFFAFVTQK 184 (430)
Q Consensus 106 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yLfNP~ti~~-~~~~st~~~~~~~vl~~l~~~~~~~ 184 (430)
+++.. -..|+ .+..++..|++||....+ .----..++...++.++.|++.||+
T Consensus 108 lA~ei-------l~~E~-------------------~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k 161 (458)
T COG3463 108 LAKEI-------LNGEK-------------------EALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKK 161 (458)
T ss_pred HHHHH-------hcccH-------------------HHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcc
Confidence 66531 11121 356788999999998874 3445678899999999999999998
Q ss_pred hhHHHHHHH--HHhhhc
Q psy10442 185 PILSSIALT--LTVQQN 199 (430)
Q Consensus 185 ~~~a~~~la--la~~~~ 199 (430)
..+..+.+. +++|-.
T Consensus 162 ~~l~li~lvlIl~tk~~ 178 (458)
T COG3463 162 WKLFLIFLVLILLTKED 178 (458)
T ss_pred hhHHHHHHHHHHHHhcc
Confidence 877666554 445544
No 26
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=41.31 E-value=4e+02 Score=27.10 Aligned_cols=64 Identities=16% Similarity=0.175 Sum_probs=44.1
Q ss_pred HHhhchhHHHhhcccChhHHHHHHHHHHHHHHHc----Cc-----hhHHHHHHHHHhhhc-hhhHHHHHHHHHH
Q psy10442 149 AYLYNPFSILNCICLTSTVFANFFLCLFFFAFVT----QK-----PILSSIALTLTVQQN-IYPITLLVPACVH 212 (430)
Q Consensus 149 ~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~----~~-----~~~a~~~lala~~~~-~YPiil~~P~~l~ 212 (430)
+=.+-|+++-...+-|.|++.+.+..+.+...++ ++ ....+++.++.+.-| .|..+..+++.+.
T Consensus 152 ~i~l~Pm~~~~~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~l~v~~~ll~~~K~~y~~l~~l~l~i~ 225 (389)
T PF09913_consen 152 LIALLPMTLFQAASVSYDGLIIALAFLFIALLLRLYRKKKITRRDLILLGVLAVLLALSKPPYIPLLLLLLLIP 225 (389)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467799999999999999999988887776655 11 235556666667777 5555444444443
No 27
>KOG2762|consensus
Probab=38.20 E-value=81 Score=32.58 Aligned_cols=51 Identities=22% Similarity=0.267 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhhcc
Q psy10442 166 TVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFHQY 216 (430)
Q Consensus 166 ~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~~~ 216 (430)
|.+..++.-+++...+++|+..+++++.+|+-.|..-..+++.+++.+-++
T Consensus 158 D~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~ 208 (429)
T KOG2762|consen 158 DPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQN 208 (429)
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHh
Confidence 677778888888888999999999999999999998888876666555443
No 28
>KOG4650|consensus
Probab=35.29 E-value=1.1e+02 Score=30.20 Aligned_cols=57 Identities=21% Similarity=0.315 Sum_probs=36.3
Q ss_pred HHHHhccCCchhHHhhhhheeeccCCCCCchhhHHHHHhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc
Q psy10442 237 FCLGLMNQDTSFLAATYGFQLTVPNLQPNIGLFWYFFTEMFEHFRVLFIVAFQINSIFLYVLPLTLRLY 305 (430)
Q Consensus 237 ~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl~WYff~emF~~f~~ff~~vfq~~~~~~~v~pl~ir~~ 305 (430)
..|..-| .|++=.|-+.+ .|.|.|+|=|||.|. -|+..+||..--....+|+.+-..
T Consensus 110 ~ny~rr~-~~~wG~ED~Rf----~d~R~~~gK~~~~~~-------~f~~~ifQ~v~l~~v~lPlyiv~~ 166 (311)
T KOG4650|consen 110 YNYLRRG-ILQWGAEDRRF----DDVRQNIGKWIYLFH-------LFYFWIFQAVWLWTVSLPLYIVNA 166 (311)
T ss_pred HHHHHHH-hhhcCchhhhH----HHHHHHhhhHHHHHH-------HHHHHHHHHHHHHHhhcchheeee
Confidence 4455544 46655555554 699999999999854 445666664321555678877653
No 29
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function. It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.
Probab=34.17 E-value=1.2e+02 Score=28.12 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q psy10442 384 FGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQ 417 (430)
Q Consensus 384 ~a~tLvf~~~~~~ll~d~i~~~l~~~~~~~~~~~ 417 (430)
....+.+.++-+.++.|+..+.+||+..++.|.+
T Consensus 86 ~~~~~g~ll~~gamlGDl~~SFIKRRlgi~~G~~ 119 (175)
T PF01864_consen 86 FNLLLGFLLGLGAMLGDLPGSFIKRRLGIPRGAP 119 (175)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCCCc
Confidence 4456778888999999999999999999887654
No 30
>PRK04032 hypothetical protein; Provisional
Probab=28.38 E-value=2.4e+02 Score=25.79 Aligned_cols=35 Identities=37% Similarity=0.455 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy10442 381 NFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENG 415 (430)
Q Consensus 381 NF~~a~tLvf~~~~~~ll~d~i~~~l~~~~~~~~~ 415 (430)
+.+.+.-+...++....+.|+..+++||+..+|.|
T Consensus 66 ~~~~~~~~g~li~v~~~~GDL~eS~iKR~~gVKDg 100 (159)
T PRK04032 66 ALGVAIILAFLLSFGALLGDMLGSFIKRRLGLERG 100 (159)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCCc
Confidence 34446666677777888999999999999988764
No 31
>KOG2642|consensus
Probab=27.69 E-value=7.2e+02 Score=25.94 Aligned_cols=56 Identities=14% Similarity=0.075 Sum_probs=42.7
Q ss_pred hhHHHhhcccChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHH
Q psy10442 154 PFSILNCICLTSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPA 209 (430)
Q Consensus 154 P~ti~~~~~~st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~ 209 (430)
|.-+..+---=||..+.++++++..+...|+...||+..+.+.-++=--|+-.+=+
T Consensus 125 P~l~~fsfLfYTD~~St~~vllay~f~~~~n~~~SAfl~~~s~lfRQTNIIWa~fi 180 (446)
T KOG2642|consen 125 PILIFFSFLFYTDLGSTFFVLLAYLFCLYGNHKTSAFLGFCSFLFRQTNIIWAVFI 180 (446)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHhccchHHHHHH
Confidence 33344444456788888999999999999999999999999999996555554433
No 32
>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]
Probab=26.97 E-value=2.4e+02 Score=27.55 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=31.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10442 378 ANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLE 413 (430)
Q Consensus 378 gNaNF~~a~tLvf~~~~~~ll~d~i~~~l~~~~~~~ 413 (430)
.+.|++...-+...++.+..+.|+...++||++.+|
T Consensus 196 ~~~~~~~~~~l~~~~~l~~~lGDL~eS~iKR~~gvK 231 (265)
T COG0575 196 LILNIWTLLILGLLLVLTSQLGDLFESYIKRLLGIK 231 (265)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHccCCC
Confidence 556778888888889999999999999999998775
No 33
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=24.94 E-value=7.7e+02 Score=25.37 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=57.5
Q ss_pred hhHHHHHHhhchhHHHhhcccChhHHHHHHHHHHHHHHHc------------CchhHHHHHHHHHhhhchhhHHHHHHHH
Q psy10442 143 PKYVALAYLYNPFSILNCICLTSTVFANFFLCLFFFAFVT------------QKPILSSIALTLTVQQNIYPITLLVPAC 210 (430)
Q Consensus 143 ~~~~~~~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~~------------~~~~~a~~~lala~~~~~YPiil~~P~~ 210 (430)
+.....+-++++.....++|--+++++..+++.+++...+ ++...+++..++++-.++--++..+|+.
T Consensus 112 a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~ 191 (418)
T PF03901_consen 112 ALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSSSSSKRYLLAIGLLAGLAVFFRPTSALFWLPLG 191 (418)
T ss_pred hhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566789999999999999999999999999998875 2345667778899999999988888986
Q ss_pred HHh
Q psy10442 211 VHF 213 (430)
Q Consensus 211 l~l 213 (430)
+..
T Consensus 192 l~~ 194 (418)
T PF03901_consen 192 LYL 194 (418)
T ss_pred HHH
Confidence 443
No 34
>PRK12876 ubiA prenyltransferase; Reviewed
Probab=24.74 E-value=5.8e+02 Score=25.65 Aligned_cols=39 Identities=13% Similarity=0.291 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhcCccc
Q psy10442 380 ANFYFGVTLAFATSQIFLLT--DLLFAYLKRDYTLENGIQK 418 (430)
Q Consensus 380 aNF~~a~tLvf~~~~~~ll~--d~i~~~l~~~~~~~~~~~~ 418 (430)
+...|...+++.++..+.+. |.+.++.-+|+|.+.|.+.
T Consensus 167 ~~~l~~~~~lw~~~~~~~~~g~DiiYa~qD~e~D~~~Gl~S 207 (300)
T PRK12876 167 SFSLFCMASLWGISFGMIIAANDIIYAIQDLEFDRKEGLFS 207 (300)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHhhHHHcCCcc
Confidence 34457777788877777776 9999999999999888763
No 35
>PLN02816 mannosyltransferase
Probab=22.99 E-value=1e+03 Score=26.06 Aligned_cols=125 Identities=8% Similarity=-0.019 Sum_probs=66.7
Q ss_pred HHhhchhHHHhhcccChhHHHHHHHHHHHHHHH---------cCchhHHHHHHHHHhhhchhhHHHHHHHHHHhh-cccc
Q psy10442 149 AYLYNPFSILNCICLTSTVFANFFLCLFFFAFV---------TQKPILSSIALTLTVQQNIYPITLLVPACVHFH-QYKK 218 (430)
Q Consensus 149 ~yLfNP~ti~~~~~~st~~~~~~~vl~~l~~~~---------~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~-~~~~ 218 (430)
+=+.||+....++|-=+.+++..+++.+++... ..+.-.+-+.-|+++-.++.-+++-+|+.+..- +.++
T Consensus 155 ~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~~~~~~~~~L~la~la~~iRPt~ailwl~l~l~~l~~~~~ 234 (546)
T PLN02816 155 CQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPVNRKWGLVIAALACAIRPTSAVIWLYVGMLELFLTPN 234 (546)
T ss_pred HHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 346788888777887788888888888887642 111222223334555568777777788765432 2222
Q ss_pred hhhHHHH----HHHHHHHHHHHHHHHhccCCchhHHhhhhheeeccCCCCCchh---hHHHHHh
Q psy10442 219 SWRLFLA----GFLLCYSGFLYFCLGLMNQDTSFLAATYGFQLTVPNLQPNIGL---FWYFFTE 275 (430)
Q Consensus 219 ~~~~~~~----~~~~~~~~L~~~sy~~~g~s~~Fl~~ty~~~l~~~Dl~pN~gl---~WYff~e 275 (430)
+.+..+. +.+.++++-..+=+..|| .|.|-.-.+...=...+....+|- +|| |++
T Consensus 235 ~~~~l~~~~l~~g~~~l~~s~~IDs~fyg-~~~~p~~nfl~FNv~~~~ss~YGt~PWh~Y-f~~ 296 (546)
T PLN02816 235 KVKFIILEVIPIGSLVLGFTCLLDRLMYG-SWVIVPLNFLKFNFLSSGGDYYGTHPWHWY-FTQ 296 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhC-CcccchhhheeEeeccCcccccccCCcHHH-HHH
Confidence 2222222 222333333445566788 676543222222123455555554 455 444
No 36
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=21.20 E-value=1e+03 Score=25.51 Aligned_cols=70 Identities=20% Similarity=0.078 Sum_probs=47.4
Q ss_pred HHHHHHhhchhHHHhhccc-ChhHHHHHHHHHHHHHHHcCchhHHHHHHHHHhhhchhhHHHHHHHHHHhh
Q psy10442 145 YVALAYLYNPFSILNCICL-TSTVFANFFLCLFFFAFVTQKPILSSIALTLTVQQNIYPITLLVPACVHFH 214 (430)
Q Consensus 145 ~~~~~yLfNP~ti~~~~~~-st~~~~~~~vl~~l~~~~~~~~~~a~~~lala~~~~~YPiil~~P~~l~l~ 214 (430)
.....=++||=-+.+-=++ ==.++.-=+.++++.++.+|+..+|++.++++..+|==-..+++|...++-
T Consensus 137 ~~~~~~l~~PgLilIDH~HFQYN~~~lGl~l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL 207 (469)
T PF03155_consen 137 IALLLILLNPGLILIDHGHFQYNGFLLGLLLLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAPAFFVYLL 207 (469)
T ss_pred HHHHHHHHCchHHhhhhhhhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444558888766654222 112233345567788889999999999999999999555666677666554
Done!