Query psy10444
Match_columns 341
No_of_seqs 269 out of 1786
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 18:20:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10444.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10444hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gup_A Galactose-1-phosphate u 100.0 9E-81 3.1E-85 607.9 30.0 278 47-340 6-283 (348)
2 1z84_A Galactose-1-phosphate u 100.0 1E-75 3.5E-80 572.8 26.6 270 46-340 18-297 (351)
3 3o1c_A Histidine triad nucleot 99.8 2.3E-20 7.9E-25 156.5 7.9 100 221-340 2-101 (126)
4 3lb5_A HIT-like protein involv 99.8 9.9E-20 3.4E-24 159.2 10.0 88 234-340 27-114 (161)
5 3ksv_A Uncharacterized protein 99.8 8.4E-20 2.9E-24 157.6 8.9 87 235-340 11-97 (149)
6 1xqu_A HIT family hydrolase; p 99.8 5E-20 1.7E-24 158.8 7.3 120 199-340 1-122 (147)
7 3imi_A HIT family protein; str 99.8 8.9E-20 3.1E-24 156.8 8.2 88 234-340 8-95 (147)
8 3o0m_A HIT family protein; ssg 99.8 1.5E-19 5.1E-24 155.8 9.2 88 234-340 4-92 (149)
9 4egu_A Histidine triad (HIT) p 99.8 6.5E-20 2.2E-24 151.9 6.4 88 234-340 3-91 (119)
10 3l7x_A SMU.412C, putative HIT- 99.8 3.1E-19 1.1E-23 157.8 9.0 88 234-340 35-122 (173)
11 3oj7_A Putative histidine tria 99.8 5E-19 1.7E-23 146.2 8.0 85 236-340 8-92 (117)
12 1y23_A HIT, histidine triad pr 99.8 6.3E-19 2.2E-23 150.5 7.5 88 234-340 4-91 (145)
13 2eo4_A 150AA long hypothetical 99.8 1.2E-18 4E-23 149.8 8.8 85 237-340 1-85 (149)
14 3n1s_A HIT-like protein HINT; 99.7 2.9E-18 9.9E-23 142.4 9.0 86 235-339 3-89 (119)
15 3ano_A AP-4-A phosphorylase; d 99.7 1.6E-17 5.6E-22 151.9 8.6 89 234-340 68-156 (218)
16 3r6f_A HIT family protein; str 99.7 9.6E-18 3.3E-22 142.1 6.4 82 234-340 5-86 (135)
17 3p0t_A Uncharacterized protein 99.7 2.4E-17 8.2E-22 139.9 8.5 82 236-336 6-87 (138)
18 2oik_A Histidine triad (HIT) p 99.6 1.4E-15 4.7E-20 131.4 9.9 70 266-336 19-88 (154)
19 1fit_A FragIle histidine prote 99.5 2.2E-14 7.4E-19 122.8 9.5 75 265-340 11-85 (147)
20 1ems_A Nitfhit, NIT-fragIle hi 99.5 2.1E-14 7.1E-19 142.9 8.6 86 234-340 296-381 (440)
21 3ohe_A Histidine triad (HIT) p 98.9 3.2E-09 1.1E-13 90.0 8.3 72 264-336 10-81 (137)
22 3i24_A HIT family hydrolase; s 98.9 3.5E-09 1.2E-13 91.1 7.9 73 264-337 10-82 (149)
23 3nrd_A Histidine triad (HIT) p 98.6 7E-08 2.4E-12 81.5 8.4 71 264-336 12-83 (135)
24 3i4s_A Histidine triad protein 98.5 3.9E-07 1.3E-11 78.3 8.4 71 264-336 15-86 (149)
25 4egu_A Histidine triad (HIT) p 98.2 1.1E-06 3.9E-11 71.8 5.5 105 91-218 4-113 (119)
26 3sp4_A Aprataxin-like protein; 98.2 4.8E-06 1.7E-10 74.9 8.9 38 269-306 23-60 (204)
27 3oj7_A Putative histidine tria 98.2 3E-06 1E-10 69.2 6.4 98 92-214 8-110 (117)
28 1gup_A Galactose-1-phosphate u 98.1 8.7E-07 3E-11 85.9 3.2 48 1-48 234-281 (348)
29 1z84_A Galactose-1-phosphate u 98.1 1.8E-06 6.3E-11 83.8 3.7 47 1-48 249-295 (351)
30 3lb5_A HIT-like protein involv 97.9 1.2E-05 3.9E-10 69.8 6.4 101 89-212 26-130 (161)
31 3n1s_A HIT-like protein HINT; 97.9 1.2E-05 4.1E-10 65.9 5.5 102 90-214 2-108 (119)
32 3o0m_A HIT family protein; ssg 97.8 2.7E-05 9.4E-10 66.2 6.2 99 91-212 5-108 (149)
33 3o1c_A Histidine triad nucleot 97.8 1.5E-05 5.1E-10 66.0 4.1 100 90-213 14-118 (126)
34 3imi_A HIT family protein; str 97.8 2.5E-05 8.7E-10 66.3 5.5 99 91-212 9-111 (147)
35 2eo4_A 150AA long hypothetical 97.7 3.7E-05 1.3E-09 65.2 6.1 97 93-212 1-101 (149)
36 1y23_A HIT, histidine triad pr 97.7 2E-05 6.7E-10 66.5 3.9 99 91-212 5-107 (145)
37 1xqu_A HIT family hydrolase; p 97.7 4.1E-05 1.4E-09 65.3 5.9 99 91-212 35-138 (147)
38 1ems_A Nitfhit, NIT-fragIle hi 97.6 0.00018 6.2E-09 71.0 8.8 99 90-212 296-397 (440)
39 3l7x_A SMU.412C, putative HIT- 97.5 9.4E-05 3.2E-09 64.8 5.3 100 90-212 35-138 (173)
40 3ano_A AP-4-A phosphorylase; d 97.4 0.00011 3.8E-09 66.7 4.8 99 91-212 69-173 (218)
41 3r6f_A HIT family protein; str 97.3 6.6E-05 2.3E-09 62.8 2.2 96 90-212 5-100 (135)
42 3ksv_A Uncharacterized protein 97.3 0.00028 9.4E-09 60.2 5.6 98 91-211 11-112 (149)
43 2oik_A Histidine triad (HIT) p 97.2 0.00013 4.6E-09 62.1 3.0 40 1-40 44-83 (154)
44 3p0t_A Uncharacterized protein 97.2 0.00016 5.6E-09 60.4 3.1 39 1-39 43-81 (138)
45 1fit_A FragIle histidine prote 96.9 0.0034 1.2E-07 52.8 8.5 79 112-212 21-101 (147)
46 3bl9_A Scavenger mRNA-decappin 95.3 0.036 1.2E-06 52.4 7.4 85 255-339 135-233 (301)
47 1vlr_A MRNA decapping enzyme; 95.0 0.049 1.7E-06 52.4 7.4 85 255-339 182-280 (350)
48 3i4s_A Histidine triad protein 94.4 0.057 1.9E-06 45.9 5.7 59 147-212 39-101 (149)
49 3nrd_A Histidine triad (HIT) p 94.2 0.083 2.8E-06 43.9 6.1 73 112-212 23-98 (135)
50 3ohe_A Histidine triad (HIT) p 93.2 0.18 6E-06 42.0 6.5 74 112-212 21-96 (137)
51 3i24_A HIT family hydrolase; s 91.9 0.23 8E-06 42.0 5.7 74 112-212 21-96 (149)
52 3sp4_A Aprataxin-like protein; 36.9 19 0.00067 31.8 2.8 47 192-243 104-150 (204)
53 3g2b_A Coenzyme PQQ synthesis 30.8 26 0.00087 27.0 2.3 24 50-73 18-41 (95)
54 1pu1_A Hypothetical protein MT 25.3 74 0.0025 24.7 3.9 26 7-33 3-28 (94)
55 3hr5_R M1prime-derived peptide 22.0 30 0.001 21.2 0.9 11 197-207 23-33 (35)
56 2v1l_A Hypothetical protein; p 20.2 1.3E+02 0.0043 25.2 4.7 44 21-64 16-74 (148)
No 1
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=100.00 E-value=9e-81 Score=607.95 Aligned_cols=278 Identities=51% Similarity=1.019 Sum_probs=257.9
Q ss_pred cccccceeecccCCcEEEEccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeCCCCccccC
Q psy10444 47 FHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLEN 126 (341)
Q Consensus 47 ~~~~~~~r~~pl~~~wviia~~R~~RP~~~~~~~~~~~~~~~~~~~CPFCpg~e~~~~~~~~~~~~vrvfpN~fPal~~~ 126 (341)
+..|+|+|+|||||+|||||++|++|||+++.+.....+++.+++.|||||||++.+|..+++|..+|||+||||||+++
T Consensus 6 ~~~~~~~R~npltg~wv~vs~~R~~RP~~~~~~~~~~~~~p~~~~~CpfCpg~~~~t~~~~p~~~~~~v~~N~fpal~~~ 85 (348)
T 1gup_A 6 PVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSD 85 (348)
T ss_dssp TTTSCEEEEETTTTEEEEECTTGGGSCCCSCCCCCCCSCCCSCCTTCTTSTTCBCTTSCBCCCCSSCEEEECTTCSCCTT
T ss_pred CCCCCceEECCcCCcEEEEeCCCCCCCCCCccccccccCCCCCCCCCCCCCCCcccCCCCCCCCceEEEecCCCceeccC
Confidence 34689999999999999999999999999987655444567777889999999999887788864499999999999987
Q ss_pred CCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCcc
Q psy10444 127 VPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHP 206 (341)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HP 206 (341)
.+.....++++|+.++|+|+|+||||||+|+.+|++||.+++..+|.+|++|+++|+++++||+||||+|+.|||||.||
T Consensus 86 ~~~~~~~~~~l~~~~~~~G~~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~~~yV~iF~N~G~~~G~Sl~Hp 165 (348)
T 1gup_A 86 TPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHP 165 (348)
T ss_dssp CCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSS
T ss_pred CCCccccCccceecCccceeEEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhcCCEEEEecccCCcCCcCCCCC
Confidence 65443335679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeecCCCCChHHHHHHHHHHHHHhcCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCC
Q psy10444 207 HCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEW 286 (341)
Q Consensus 207 HsQiia~p~vP~~~~~el~~~~~y~~~~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~ 286 (341)
|+||||+|++|+.++.+++++++||++++.|+||+|+++|+ ..++|+|++|++|+||+|++|.+
T Consensus 166 H~Qi~a~~~~p~~~~~e~~~~~~y~~~~~~Cifc~ii~~E~----------------~~~~~iV~E~e~~~af~~~~p~~ 229 (348)
T 1gup_A 166 GGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQREL----------------ADGSRTVVETEHWLAVVPYWAAW 229 (348)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHHHHHSSCHHHHHHHHHH----------------HHCTTEEEECSSEEEECCTTCCS
T ss_pred ceeEEecccCChHHHHHHHHHHHHHhcCCCCchhHHHhhcc----------------ccCceEEEeCCcEEEEEccCCCC
Confidence 99999999999999999999999999999999999999988 55789999999999999999999
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 287 PFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 287 p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
|||+||+||+|+.+|.+|+++++.+|++++++++++|+++++.++|||||||++
T Consensus 230 pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~ 283 (348)
T 1gup_A 230 PFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGA 283 (348)
T ss_dssp TTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECC
T ss_pred ceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 999999999999999999999999999999999999999998667999999986
No 2
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=100.00 E-value=1e-75 Score=572.83 Aligned_cols=270 Identities=23% Similarity=0.396 Sum_probs=229.6
Q ss_pred ccccccceeecccCCcEEEEccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCceeeeeC
Q psy10444 46 GFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEV-------NPNYDSVFVFNN 118 (341)
Q Consensus 46 ~~~~~~~~r~~pl~~~wviia~~R~~RP~~~~~~~~~~~~~~~~~~~CPFCpg~e~~~~~~-------~~~~~~vrvfpN 118 (341)
.+..|+|+|+|||||+|||||++|++|||+++.+....... .++.|||||||++.+++. +++| +++||+|
T Consensus 18 ~~~~~~e~R~npltg~wv~vs~~R~~RP~~~~~~~~~~~~~--~~~~CpfCpg~~~~t~~e~~~~~~~~~~~-~~~v~~N 94 (351)
T 1z84_A 18 VENQSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNP--KPSSCPFCIGREQECAPELFRVPDHDPNW-KLRVIEN 94 (351)
T ss_dssp ----CCEEEEETTTTEEEEECC----CGGGCCCCCC---------CCCTTSTTCGGGSSCEEEEESTTCSSC-SEEEEEC
T ss_pred CccCCCceEECCcCCcEEEEeCCCCCCCCCCcccccccccC--CCCCCcCCCCCcccCCcccccccccCCCc-eEEEEcC
Confidence 34468999999999999999999999999987543211111 355799999999887641 2454 8999999
Q ss_pred CCCcc-ccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhc--cCCceEEEeeec
Q psy10444 119 DFPAL-LENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLG--KTYEWVQIFENK 195 (341)
Q Consensus 119 ~fPal-~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~--~~i~Yv~iFkN~ 195 (341)
|||++ +.+++......+|+|++++|+|+|+||||||+|+.+|++||.+++..++++|++|+++|+ ++++||+||||+
T Consensus 95 ~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~ 174 (351)
T 1z84_A 95 LYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQ 174 (351)
T ss_dssp SSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSCHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEE
T ss_pred CCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCCHHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEc
Confidence 99999 666554332222799999999999999999999999999999999999999999999997 589999999999
Q ss_pred CcCCCCCCCccccceeecCCCCChHHHHHHHHHHHHHhcCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCc
Q psy10444 196 GAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPD 275 (341)
Q Consensus 196 G~~aGaSl~HPHsQiia~p~vP~~~~~el~~~~~y~~~~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~ 275 (341)
|+.|||||.|||+||||+|++|+.++++++++++||+++|+|+||+|+++|+ +|+||++
T Consensus 175 G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~~~~ciFc~ii~~E~---------------------iV~E~e~ 233 (351)
T 1z84_A 175 GASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHF---------------------VIDESSH 233 (351)
T ss_dssp SGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHHHSSCTTTTHHHHSE---------------------EEEECSS
T ss_pred CcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhhcCCCHHHHHHhcCe---------------------EEecCCc
Confidence 9999999999999999999999999999999999999999999999986432 9999999
Q ss_pred EEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 276 WVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 276 ~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
|+||+|++|++|||+||+||+|+.+|.+|+++++.+|++++++++++|+++++. .||||+||++
T Consensus 234 ~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~-~~yn~~~n~g 297 (351)
T 1z84_A 234 FVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLND-PPYNYMIHTS 297 (351)
T ss_dssp EEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTS-CCEEEEEECC
T ss_pred EEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999974 4999999985
No 3
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.81 E-value=2.3e-20 Score=156.48 Aligned_cols=100 Identities=10% Similarity=0.153 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhcCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCC
Q psy10444 221 RIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLR 300 (341)
Q Consensus 221 ~~el~~~~~y~~~~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~ 300 (341)
..|++++++|+ ..++|+||+|+++|+ ++++|+||++++||+|++|.+|||+||+||+|+.+
T Consensus 2 ~~~~~~~~~~~-~~~~CiFC~i~~~e~------------------~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~ 62 (126)
T 3o1c_A 2 ADEIAKAQVAR-PGGDTIFGKIIRKEI------------------PAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQ 62 (126)
T ss_dssp ----------C-TTCSSHHHHHHHTSS------------------CCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCC
T ss_pred cchhhcccccC-CCCCCCcchhhcCCC------------------cCCEEEECCCEEEEECCCCCCCceEEEEechHhch
Confidence 45788899997 778999999998876 67999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 301 FTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 301 ~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
+.+|++++...|+++++.+.+.++ .++.+.+||+++|..
T Consensus 63 l~dL~~~e~~~l~~l~~~~~~~~~-~~~~~~g~ni~~n~g 101 (126)
T 3o1c_A 63 ISAAEDADESLLGHLMIVGKKCAA-DLGLKKGYRMVVNEG 101 (126)
T ss_dssp GGGCCGGGHHHHHHHHHHHHHHHH-HTTCTTCEEEECCCH
T ss_pred HhhCchhHHHHHHHHHHHHHHHHH-HhCCCCCeEEEEecC
Confidence 999999999999999875444444 444467999999863
No 4
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.80 E-value=9.9e-20 Score=159.19 Aligned_cols=88 Identities=13% Similarity=0.194 Sum_probs=83.6
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+|+++|+ ++++|+||++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 27 ~~~CiFC~i~~~e~------------------p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~ 88 (161)
T 3lb5_A 27 DNNNIFAKLIRNEI------------------PSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVI 88 (161)
T ss_dssp CTTSHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHH
T ss_pred CCCCcccccccCCC------------------CccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHH
Confidence 57899999998876 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++++.+++++.++ +.+||+++|+.
T Consensus 89 ~~~~~v~~~l~~~~~-~~g~ni~~n~g 114 (161)
T 3lb5_A 89 KAVQKIAKAVKKAFQ-ADGITVMQFNE 114 (161)
T ss_dssp HHHHHHHHHHHHHHT-CSEEEEEEEES
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEecC
Confidence 999999999999996 88999999964
No 5
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.80 E-value=8.4e-20 Score=157.64 Aligned_cols=87 Identities=8% Similarity=0.102 Sum_probs=83.2
Q ss_pred CCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy10444 235 GKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLAD 314 (341)
Q Consensus 235 g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~ 314 (341)
..|+||+|+++|+ ++++||||++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+.
T Consensus 11 ~~~iFc~Ii~gei------------------p~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~ 72 (149)
T 3ksv_A 11 ANCIFCKIIKGDI------------------PCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGV 72 (149)
T ss_dssp TTCHHHHHHHTSS------------------CCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHH
T ss_pred ccCHHHHHHcCCC------------------CccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHH
Confidence 4899999999887 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 315 IIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 315 ~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
+++++.+++++.++ +.+||+++|+.
T Consensus 73 ~~~~v~~~l~~~~~-~~g~ni~~n~g 97 (149)
T 3ksv_A 73 LLAKASRAVAGPDG-SMQYNVLQNNG 97 (149)
T ss_dssp HHHHHHHHHHCTTS-CCEEEEEECCS
T ss_pred HHHHHHHHHHHhhC-CCCEEEEEecC
Confidence 99999999999996 88999999974
No 6
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.80 E-value=5e-20 Score=158.85 Aligned_cols=120 Identities=17% Similarity=0.272 Sum_probs=79.8
Q ss_pred CCCCCCccccceeecCCCCChHHH-HHHHHHHHHHhcCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEE
Q psy10444 199 MGCSNPHPHCQVWASSFLPNLPRI-KDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWV 277 (341)
Q Consensus 199 aGaSl~HPHsQiia~p~vP~~~~~-el~~~~~y~~~~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~ 277 (341)
+|.|-.|-|-. +..+|..... -++.........++|+||+++++|+ +.++|+||++|+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~m~~CiFC~ii~~e~------------------~~~iV~e~e~~~ 59 (147)
T 1xqu_A 1 MGSSHHHHHHS---SGLVPRGSQSTSLYKKAGLMYTLENCVFCKIIKREL------------------PSTIYYEDERVI 59 (147)
T ss_dssp ------------------------------------CTTCHHHHHHTTSS------------------CBCEEEECSSEE
T ss_pred CCccccccccc---cCcccCCccchhhHhhccchhccCCCcccccccCCC------------------CcEEEEECCcEE
Confidence 46666555432 3455543221 2222222223457899999998776 679999999999
Q ss_pred EEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCC-CCCeEEEEecC
Q psy10444 278 VVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKV-SFPYSMGFHVC 340 (341)
Q Consensus 278 a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~-~~pyn~g~h~~ 340 (341)
||+|++|.+|||+||+||+|+.++.+|+++|+.+|+++++ +++++.+.++. +.+||+++|++
T Consensus 60 af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~-~~~~v~~~~~~~~~gyni~~n~g 122 (147)
T 1xqu_A 60 AIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHK-AANKVAEDLGIAEKGYRLITNCG 122 (147)
T ss_dssp EEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHH-HHHHHHHHTTCTTTCEEEECCCS
T ss_pred EEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHH-HHHHHHHHhCCCCCCEEEEEecC
Confidence 9999999999999999999999999999999999999999 67777777763 46999999974
No 7
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.79 E-value=8.9e-20 Score=156.80 Aligned_cols=88 Identities=9% Similarity=0.137 Sum_probs=83.4
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+|+++|+ ++++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 8 m~~CifC~i~~~e~------------------~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~ 69 (147)
T 3imi_A 8 ADNCIFCKIIDGQI------------------LCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIF 69 (147)
T ss_dssp GGGCHHHHHHTTSS------------------CCCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHH
T ss_pred cCCCcCcccccCCC------------------cCCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHH
Confidence 46899999998877 678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++++.+++++.++ +.+||+++|+.
T Consensus 70 ~~~~~v~~~l~~~~~-~~~~ni~~n~g 95 (147)
T 3imi_A 70 SVVPKIANAIKAEFN-PVGFNLLNNNG 95 (147)
T ss_dssp HTHHHHHHHHHHHHC-CSEEEEEEEES
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEeCC
Confidence 999999999999996 89999999974
No 8
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.79 E-value=1.5e-19 Score=155.76 Aligned_cols=88 Identities=11% Similarity=0.146 Sum_probs=82.8
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
..+|+||+|+++|+ +.++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 4 m~~CiFC~i~~~e~------------------~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~ 65 (149)
T 3o0m_A 4 SMSCVFCAIVSGDA------------------PAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMA 65 (149)
T ss_dssp TTTCHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHH
T ss_pred CCCCccCccccCCC------------------CCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHH
Confidence 35799999998876 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhH-hCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNL-FKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~-~~~~~pyn~g~h~~ 340 (341)
.+++++.+++++. ++ +.+||+++|+.
T Consensus 66 ~~~~~v~~~l~~~~~~-~~~~ni~~n~g 92 (149)
T 3o0m_A 66 AVGQRIARAARESGLH-ADGNNIAINDG 92 (149)
T ss_dssp HHHHHHHHHHHHSTTC-CSEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCC-CCceEEEEecC
Confidence 9999999999998 86 88999999864
No 9
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.79 E-value=6.5e-20 Score=151.86 Aligned_cols=88 Identities=10% Similarity=0.115 Sum_probs=77.5
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+|+++|. ++++|+||++|+||+|++|.+|||+||+||+|++++.+|+++|+.+|+
T Consensus 3 ~~~C~FC~i~~~e~------------------~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~ 64 (119)
T 4egu_A 3 RMDCIFCKIANGEI------------------PSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVS 64 (119)
T ss_dssp CTTCHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHH
T ss_pred CCCccCeecccCCC------------------CCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHH
Confidence 46899999998776 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhC-CCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFK-VSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~-~~~pyn~g~h~~ 340 (341)
++++. ++++.+.++ .+.|||+++|+.
T Consensus 65 ~~~~~-~~~~~~~~~~~~~~~ni~~n~g 91 (119)
T 4egu_A 65 HIHVV-INKIAKEKGFDQTGFRVINNCG 91 (119)
T ss_dssp HHHHH-HHHHHHHHTHHHHCEEEEEEET
T ss_pred HHHHH-HHHHHHHhCCCCCCEEEEEeCC
Confidence 99984 555555542 267999999974
No 10
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.78 E-value=3.1e-19 Score=157.85 Aligned_cols=88 Identities=17% Similarity=0.159 Sum_probs=83.4
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+|+++|+ +.++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 35 m~~CiFC~Ii~~e~------------------p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~ 96 (173)
T 3l7x_A 35 MNDCLFCKIVAGDI------------------PSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLF 96 (173)
T ss_dssp CTTCHHHHHHHTSS------------------CCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHH
T ss_pred CCCCcccccccCCC------------------CceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHH
Confidence 46899999998877 679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++++.+++++.++ +.+||+++|+.
T Consensus 97 ~~~~~v~~~l~~~~~-~~g~ni~~n~g 122 (173)
T 3l7x_A 97 ARIPKIARALQKATK-ADGLNIINNNE 122 (173)
T ss_dssp HTHHHHHHHHHHHHT-CSEEEEEECCS
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEecC
Confidence 999999999999996 89999999874
No 11
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.77 E-value=5e-19 Score=146.21 Aligned_cols=85 Identities=8% Similarity=0.235 Sum_probs=75.3
Q ss_pred CCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy10444 236 KPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADI 315 (341)
Q Consensus 236 ~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~ 315 (341)
+|+||+++++|. ++++|+||++|+||+|++|.+|||+||+||+|+.++.+|+++|+.+|+++
T Consensus 8 ~CiFC~i~~~e~------------------~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l 69 (117)
T 3oj7_A 8 SCIFCKIAQKQI------------------PSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKV 69 (117)
T ss_dssp -CHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHH
T ss_pred CCcccccccCCC------------------CCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHH
Confidence 399999998776 68999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 316 IKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 316 l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
++.+.+.+++.+. + +||+++|+.
T Consensus 70 ~~~~~~~~~~~~~-~-g~ni~~n~g 92 (117)
T 3oj7_A 70 LYKVSLIGKKECP-E-GYRVVNNIG 92 (117)
T ss_dssp HHHHHHHHHHHCT-T-CEEEECCCS
T ss_pred HHHHHHHHHhcCC-C-CeEEEEcCC
Confidence 9866655655453 4 999999974
No 12
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.76 E-value=6.3e-19 Score=150.52 Aligned_cols=88 Identities=10% Similarity=0.154 Sum_probs=82.4
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+++++|+ +.++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 4 ~~~C~fC~i~~~e~------------------~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~ 65 (145)
T 1y23_A 4 AENCIFCKIIAGDI------------------PSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYF 65 (145)
T ss_dssp -CCCHHHHHHHTSS------------------CCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTT
T ss_pred CCCCcCCccccCCC------------------CCCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHH
Confidence 36899999998776 679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++++.+++++.++ +.+||+++|+.
T Consensus 66 ~~~~~v~~~l~~~~~-~~~~ni~~n~g 91 (145)
T 1y23_A 66 HAVPKIARAIRDEFE-PIGLNTLNNNG 91 (145)
T ss_dssp THHHHHHHHHHHHHC-CSEEEEEEEES
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEcCC
Confidence 999999999999996 78999999863
No 13
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.76 E-value=1.2e-18 Score=149.84 Aligned_cols=85 Identities=13% Similarity=0.246 Sum_probs=81.0
Q ss_pred CccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHH
Q psy10444 237 PLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADII 316 (341)
Q Consensus 237 c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l 316 (341)
|+||+++++|+ ++++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+.++
T Consensus 1 CiFC~i~~~e~------------------~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~ 62 (149)
T 2eo4_A 1 CTFCSIINREL------------------EGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVV 62 (149)
T ss_dssp CHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHH
T ss_pred CcCcccccCCC------------------CccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHH
Confidence 99999998876 679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 317 KKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 317 ~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
+++.+++++.++ +.+||+++|+.
T Consensus 63 ~~v~~~l~~~~~-~~~~ni~~n~g 85 (149)
T 2eo4_A 63 KLVSLGIKDAVK-ADGLRLLTNIG 85 (149)
T ss_dssp HHHHHHHHHHTT-CSEEEEECCCS
T ss_pred HHHHHHHHHhcC-CCCeEEEEecC
Confidence 999999999996 78999999864
No 14
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.74 E-value=2.9e-18 Score=142.38 Aligned_cols=86 Identities=10% Similarity=0.195 Sum_probs=76.1
Q ss_pred CCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy10444 235 GKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLAD 314 (341)
Q Consensus 235 g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~ 314 (341)
++|+||+|+++|+ ++++||||++++||+|++|.+|||+||+||+|++++.+|+++|+.+|++
T Consensus 3 ~~CiFC~I~~ge~------------------~~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~ 64 (119)
T 3n1s_A 3 EETIFSKIIRREI------------------PSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGR 64 (119)
T ss_dssp CCCHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHH
T ss_pred CCChhhhhhcCCC------------------cCCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHH
Confidence 5899999998876 6899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHh-HhCCCCCeEEEEec
Q psy10444 315 IIKKITTKYDN-LFKVSFPYSMGFHV 339 (341)
Q Consensus 315 ~l~~v~~~l~~-~~~~~~pyn~g~h~ 339 (341)
+++.+.+..++ .+ .+.+||+++|.
T Consensus 65 l~~~~~~v~~~~~~-~~~g~ni~~n~ 89 (119)
T 3n1s_A 65 MITVAAKIAEQEGI-AEDGYRLIMNT 89 (119)
T ss_dssp HHHHHHHHHHHTTC-TTTCEEEEEEE
T ss_pred HHHHHHHHHHHhCC-CCCCeEEEEeC
Confidence 88766555554 35 37899999985
No 15
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.70 E-value=1.6e-17 Score=151.86 Aligned_cols=89 Identities=17% Similarity=0.224 Sum_probs=80.9
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.+.|+||+|++++. .+.++|+++++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 68 ~~~CiFC~i~~~e~-----------------~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~ 130 (218)
T 3ano_A 68 SPAQPFTEIPQLSD-----------------EEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELM 130 (218)
T ss_dssp --CCHHHHGGGSCH-----------------HHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHH
T ss_pred CCCCcCcccccCCC-----------------CCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHH
Confidence 45899999997631 2678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++.+.+++++.++ +.+||+++|+.
T Consensus 131 ~l~~~v~~~l~~~~~-~~g~ni~~n~G 156 (218)
T 3ano_A 131 AFTQKAIRVIKNVSR-PHGFNVGLNLG 156 (218)
T ss_dssp HHHHHHHHHHHHHCC-CSEEEEEEEES
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEecC
Confidence 999999999999996 88999999963
No 16
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.70 E-value=9.6e-18 Score=142.09 Aligned_cols=82 Identities=9% Similarity=0.134 Sum_probs=73.9
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+|++ . ++++|+||++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 5 ~~~C~fC~i~~--~------------------~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~ 64 (135)
T 3r6f_A 5 MEGCIFCTLYR--K------------------GANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVL 64 (135)
T ss_dssp -CCCHHHHHHH--H------------------CCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHH
T ss_pred CCCCcCccccc--C------------------CceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHH
Confidence 46899999986 5 679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++++.+. ++ +.+||+++|++
T Consensus 65 ~~~~~v~~~----~~-~~~~ni~~n~g 86 (135)
T 3r6f_A 65 DTIRHLVQK----FG-FERYNILQNNG 86 (135)
T ss_dssp HHHHHHHHH----HT-CCSEEEECCSS
T ss_pred HHHHHHHHH----hC-CCCeEEEEEcC
Confidence 998887754 44 67999999975
No 17
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.70 E-value=2.4e-17 Score=139.86 Aligned_cols=82 Identities=17% Similarity=0.252 Sum_probs=77.3
Q ss_pred CCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy10444 236 KPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADI 315 (341)
Q Consensus 236 ~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~ 315 (341)
+|+||+|+++|. ++++|+||++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+
T Consensus 6 ~CiFC~i~~~e~------------------p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~ 67 (138)
T 3p0t_A 6 ASIFTKIINREL------------------PGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGV 67 (138)
T ss_dssp HHHHHHHHTTSS------------------CCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHH
T ss_pred CChhhHHhcCCC------------------CcCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHH
Confidence 599999998876 67999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhCCCCCeEEE
Q psy10444 316 IKKITTKYDNLFKVSFPYSMG 336 (341)
Q Consensus 316 l~~v~~~l~~~~~~~~pyn~g 336 (341)
++++.+++++.++ +.++|+.
T Consensus 68 ~~~v~~~l~~~~~-~~~~n~~ 87 (138)
T 3p0t_A 68 SQLIGKAVCKAFR-TERSGLI 87 (138)
T ss_dssp HHHHHHHHHHHHT-CSEEEEE
T ss_pred HHHHHHHHHHhcC-CCCCcEE
Confidence 9999999999996 7778774
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.61 E-value=1.4e-15 Score=131.37 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=67.6
Q ss_pred CCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEE
Q psy10444 266 RDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMG 336 (341)
Q Consensus 266 ~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g 336 (341)
++++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++ +.+||++
T Consensus 19 ~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~-~~g~ni~ 88 (154)
T 2oik_A 19 GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMR-PDKINLA 88 (154)
T ss_dssp CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHC-CSEEEEE
T ss_pred CCeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEhH
Confidence 579999999999999999999999999999999999999999999999999999999999996 7799997
No 19
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.53 E-value=2.2e-14 Score=122.84 Aligned_cols=75 Identities=17% Similarity=0.202 Sum_probs=71.4
Q ss_pred cCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 265 KRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 265 ~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.++++|++|++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++ +.+||+++|+.
T Consensus 11 p~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~-~~~~ni~~n~g 85 (147)
T 1fit_A 11 KPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFH-GTSLTFSMQDG 85 (147)
T ss_dssp CGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEECCS
T ss_pred CCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEecC
Confidence 4689999999999999999999999999999999999999999999999999999999999996 77999999863
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.51 E-value=2.1e-14 Score=142.91 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=78.6
Q ss_pred cCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy10444 234 HGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLA 313 (341)
Q Consensus 234 ~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La 313 (341)
.++|+||+ +|+ ...++|+||++|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+
T Consensus 296 ~~~c~fc~---~e~-----------------p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~ 355 (440)
T 1ems_A 296 TGGLKFAR---FNI-----------------PADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLF 355 (440)
T ss_dssp SSCCEETT---EEC-----------------CGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHH
T ss_pred cCceeeec---ccc-----------------CCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHH
Confidence 45799998 344 2458999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444 314 DIIKKITTKYDNLFKVSFPYSMGFHVC 340 (341)
Q Consensus 314 ~~l~~v~~~l~~~~~~~~pyn~g~h~~ 340 (341)
.+++++.+++++.++ +.+||+++|+.
T Consensus 356 ~~~~~v~~~l~~~~~-~~~~n~~~~~g 381 (440)
T 1ems_A 356 IVAKKVQAMLEKHHN-VTSTTICVQDG 381 (440)
T ss_dssp HHHHHHHHHHHHHTT-CSEEEEECCCS
T ss_pred HHHHHHHHHHHhhcC-CCCeEEEEecC
Confidence 999999999999996 77999999864
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=98.90 E-value=3.2e-09 Score=90.05 Aligned_cols=72 Identities=11% Similarity=0.120 Sum_probs=68.2
Q ss_pred ccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEE
Q psy10444 264 LKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMG 336 (341)
Q Consensus 264 ~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g 336 (341)
+....+|++++.+.+++...|.+|+|++|+||+|+.++.||++++..+|...++++.+.+.+.++ +.++|+|
T Consensus 10 ~~d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~ 81 (137)
T 3ohe_A 10 AADTHKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFG-GDKMNVA 81 (137)
T ss_dssp HHHEEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEE
T ss_pred ccccEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEe
Confidence 34678999999999999999999999999999999999999999999999999999999999996 8899988
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=98.88 E-value=3.5e-09 Score=91.10 Aligned_cols=73 Identities=11% Similarity=0.069 Sum_probs=68.6
Q ss_pred ccCCeEEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEE
Q psy10444 264 LKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGF 337 (341)
Q Consensus 264 ~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~ 337 (341)
+....+|++++.++||+...|.+|||++|+||+|+.++.||++++..+|...++++.+++.+.++ +.++|+|.
T Consensus 10 ~~d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~-~~~~Ni~~ 82 (149)
T 3i24_A 10 QQDCIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFS-PDKINIGA 82 (149)
T ss_dssp HHHEEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHC-CSEEEEEE
T ss_pred ccCCEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEhh
Confidence 34678999999999999999999999999999999999999999999999999999999999996 78999984
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=98.65 E-value=7e-08 Score=81.48 Aligned_cols=71 Identities=8% Similarity=0.063 Sum_probs=65.3
Q ss_pred ccCCeEEEECCcEEEEecCCCCCCceEEEEeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEE
Q psy10444 264 LKRDRVVVRNPDWVVVVPFWAEWPFETMILPR-THVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMG 336 (341)
Q Consensus 264 ~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk-~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g 336 (341)
+....+|++++.+.+++...|.+| |++|||+ +|+.++.||++++..+|...++++.+.+.+.++ +.++|+|
T Consensus 12 ~~~~~~v~~~~~~~v~l~~~~~~p-~~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~-~~~~N~~ 83 (135)
T 3nrd_A 12 ERDGIPIGTLGLCQMRLMNDRRWP-WLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATG-AEKINIG 83 (135)
T ss_dssp HHHEEEEEECSSEEEEEESCTTSC-EEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE
T ss_pred ccCCEEEEECCcEEEEEcCCCCCC-EEEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe
Confidence 345789999999999999999999 5788898 799999999999999999999999999999996 8899987
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=98.47 E-value=3.9e-07 Score=78.30 Aligned_cols=71 Identities=20% Similarity=0.250 Sum_probs=63.4
Q ss_pred ccCCeEEEECCcEEEEecCCCCCCceEEEEeCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEE
Q psy10444 264 LKRDRVVVRNPDWVVVVPFWAEWPFETMILPRT-HVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMG 336 (341)
Q Consensus 264 ~~~~rvV~~~~~~~a~~p~~~~~p~e~~I~Pk~-H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g 336 (341)
+....++.+.+.+++++...+.+| |++||||+ |+.++.||+++++.+|+..++++.+.+.+.++ +.+||++
T Consensus 15 ~~d~~~~~e~p~~~v~l~~~~~~~-H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~-~~g~N~~ 86 (149)
T 3i4s_A 15 KEDTIDIGDLPLSKVLVIKDANYP-WLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITK-CDKLNIA 86 (149)
T ss_dssp HHHEEEEEECSSEEEEEESCTTSC-EEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CSEEEEE
T ss_pred hhCCEEEEEcCceEEEECCCCCCC-EEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEe
Confidence 345779999999999998655544 89999999 89999999999999999999999999999996 7889987
No 25
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=98.23 E-value=1.1e-06 Score=71.84 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=68.5
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHH
Q psy10444 91 PKNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168 (341)
Q Consensus 91 ~~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i 168 (341)
..|+||.-.....+ -+.++ ..+.+|-|.||... ..|+|...+|..++.+|+.++.
T Consensus 4 ~~C~FC~i~~~e~~~~iv~e~-e~~~af~d~~P~~p----------------------gH~LViPk~H~~~l~dL~~~e~ 60 (119)
T 4egu_A 4 MDCIFCKIANGEIPSTKVYED-DRVLAFNDLNPVAP----------------------YHILVVPKKHYDSLIDIPDKEM 60 (119)
T ss_dssp TTCHHHHHHTTSSCCCEEEEC-SSEEEEECSSCSSS----------------------EEEEEEESSCCSSGGGSCGGGT
T ss_pred CCccCeecccCCCCCCEEEEC-CCEEEEECCCCCCC----------------------ceEEEEechhhCCHhHCCHhHH
Confidence 47999963222111 12233 25889999999751 3467778999999999998854
Q ss_pred H---HHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCccccceeecCCCCC
Q psy10444 169 R---KVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPN 218 (341)
Q Consensus 169 ~---~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPHsQiia~p~vP~ 218 (341)
. .++.+.+.-.+.+.-...-..+..|.|+.+|.|+.|.|.+|++-....+
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~~ 113 (119)
T 4egu_A 61 DIVSHIHVVINKIAKEKGFDQTGFRVINNCGSDGGQEVKHLHYHILAGKKLPN 113 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHCEEEEEEETTTTTCCSCSCCEEEEESSCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCCCCCCcCEEEEEEeCCcccCc
Confidence 4 4444333333332201112357789999999999999999998665443
No 26
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.18 E-value=4.8e-06 Score=74.94 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=35.6
Q ss_pred EEEECCcEEEEecCCCCCCceEEEEeCCCCCCCCCCCH
Q psy10444 269 VVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDD 306 (341)
Q Consensus 269 vV~~~~~~~a~~p~~~~~p~e~~I~Pk~H~~~~~~l~~ 306 (341)
+||+|+.++||.+.+|..|+|+|||||+|+.++.++.+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~ 60 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLE 60 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhh
Confidence 99999999999999999999999999999999887543
No 27
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=98.15 E-value=3e-06 Score=69.16 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=65.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHH
Q psy10444 92 KNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIR 169 (341)
Q Consensus 92 ~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~ 169 (341)
.|+||.-...+.+ -+.++ ..+.+|-|.||... ..|+|...+|..++.+|+.++..
T Consensus 8 ~CiFC~i~~~e~~~~iv~e~-~~~~af~d~~P~~p----------------------gH~LViPk~H~~~l~dL~~~e~~ 64 (117)
T 3oj7_A 8 SCIFCKIAQKQIPSTIVYED-DEIFAFKDINPIAP----------------------IHILVIPKQHIASLNEITEENEA 64 (117)
T ss_dssp -CHHHHHHTTSSCCCEEEEC-SSEEEEECSSCSSS----------------------EEEEEEESSCCCSGGGCCTTTHH
T ss_pred CCcccccccCCCCCCEEEEC-CcEEEEECCCCCCC----------------------ceEEEEechHhCCHHHCCHHHHH
Confidence 3999975332211 12223 35889999999752 35667789999999999988654
Q ss_pred HHHHHH---HHHHHHhccCCceEEEeeecCcCCCCCCCccccceeecC
Q psy10444 170 KVIDTW---VDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASS 214 (341)
Q Consensus 170 ~vl~~~---~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPHsQiia~p 214 (341)
.+..+. +...++.-.. -..+..|.|+.+|.|+.|.|.+|++-.
T Consensus 65 ~l~~l~~~~~~~~~~~~~~--g~ni~~n~g~~agq~v~H~H~Hiipr~ 110 (117)
T 3oj7_A 65 FIGKVLYKVSLIGKKECPE--GYRVVNNIGEDAGQTVKHIHFHILGGK 110 (117)
T ss_dssp HHHHHHHHHHHHHHHHCTT--CEEEECCCSTTTTCCSSSCCEEEEESS
T ss_pred HHHHHHHHHHHHHHhcCCC--CeEEEEcCCCCCCeeeeEEEEEEeCCC
Confidence 444333 3333321122 446889999999999999999999743
No 28
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=98.13 E-value=8.7e-07 Score=85.89 Aligned_cols=48 Identities=63% Similarity=1.125 Sum_probs=45.8
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCccc
Q psy10444 1 MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 48 (341)
Q Consensus 1 ~i~Pkr~~~~l~~~~~~e~~~la~~lk~~~~~~d~lf~~~~pY~M~~~ 48 (341)
||+||+|+.++.||+++|+.+||++|++++++|+++|+.++||+|+++
T Consensus 234 lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~ 281 (348)
T 1gup_A 234 LLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWH 281 (348)
T ss_dssp EEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEE
T ss_pred EEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 589999999999999999999999999999999999998899999765
No 29
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.05 E-value=1.8e-06 Score=83.77 Aligned_cols=47 Identities=28% Similarity=0.521 Sum_probs=44.1
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCccc
Q psy10444 1 MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 48 (341)
Q Consensus 1 ~i~Pkr~~~~l~~~~~~e~~~la~~lk~~~~~~d~lf~~~~pY~M~~~ 48 (341)
||+||+|+.++.||+++|+.+||++|++++++|+++|+.+ ||+|+++
T Consensus 249 lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~-~yn~~~n 295 (351)
T 1z84_A 249 WIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDP-PYNYMIH 295 (351)
T ss_dssp EEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEEE
T ss_pred EEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 5899999999999999999999999999999999999988 9999543
No 30
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=97.95 E-value=1.2e-05 Score=69.75 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=74.0
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHH
Q psy10444 89 FDPKNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIE 166 (341)
Q Consensus 89 ~~~~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~ 166 (341)
+++.|+||.-.....+ -+.++ ..+.+|-|.+|... ..++|..-+|..++.+|+.+
T Consensus 26 ~~~~CiFC~i~~~e~p~~iV~e~-e~~~af~d~~P~~p----------------------gH~LViPk~H~~~l~dL~~e 82 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIPSVRVYED-DDVIAFMDIMPQAP----------------------GHTLVIPKKGSRNLLDADTE 82 (161)
T ss_dssp CCTTSHHHHHHTTSSCCCEEEEC-SSEEEEECSSCSST----------------------TCEEEEESSCCSSTTTSCHH
T ss_pred CCCCCcccccccCCCCccEEEEC-CCEEEEECCCcCCC----------------------cEEEEEEeeccchhhhCCHH
Confidence 4678999975432211 12223 25888999999752 23566678999999999999
Q ss_pred HHHHHHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 167 EIRKVIDTWVDETASLGK--TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 167 ~i~~vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
++..++.+.+.-.+.|++ ...=+.+..|.|+.+|.+..|.|.+|+.
T Consensus 83 e~~~l~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~HlHiHiiP 130 (161)
T 3lb5_A 83 TLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIP 130 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEEEEEESGGGTCCSCSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCCCEEEEEEEc
Confidence 999999988877776642 2223457788899999999999999984
No 31
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=97.90 E-value=1.2e-05 Score=65.94 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=66.9
Q ss_pred CCCCCCCCC--CCCCCCCCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHH
Q psy10444 90 DPKNPLCPT--ATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEE 167 (341)
Q Consensus 90 ~~~CPFCpg--~e~~~~~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~ 167 (341)
++.|+||.= .|....-+.++ ..+.+|-|.||... ..++|..-+|..++.+++.++
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ed-e~~~af~d~~P~~p----------------------gH~LViPk~Hv~~l~dL~~~e 58 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQD-DLVTAFRDISPQAP----------------------THILIIPNILIPTVNDVSAEH 58 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEEC-SSEEEEECSSCSSS----------------------EEEEEEESSCCCSGGGCCGGG
T ss_pred CCCChhhhhhcCCCcCCEEEEC-CCEEEEECCCCCCC----------------------CeEEEEehhHhCCHhHcCHHH
Confidence 357999962 22111112333 35899999999751 245566789999999999995
Q ss_pred ---HHHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCccccceeecC
Q psy10444 168 ---IRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASS 214 (341)
Q Consensus 168 ---i~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPHsQiia~p 214 (341)
+..++.+.+.-.+++.-...=..+.-|.|+.||.|+.|-|..|+.-.
T Consensus 59 ~~~l~~l~~~~~~v~~~~~~~~~g~ni~~n~g~~agq~V~HlH~Hiipr~ 108 (119)
T 3n1s_A 59 EQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGR 108 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTTCEEEEEEEHHHHTCCSSSCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCCcCCCcCEEEEEEeCCc
Confidence 44555555544444321111234667999999999999999999744
No 32
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=97.80 E-value=2.7e-05 Score=66.22 Aligned_cols=99 Identities=10% Similarity=0.010 Sum_probs=71.5
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHH
Q psy10444 91 PKNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168 (341)
Q Consensus 91 ~~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i 168 (341)
..|+||--.....+ -+.++ ..+.+|-|.+|... .| ++|..-+|..++.+|+.+++
T Consensus 5 ~~CiFC~i~~~e~~~~iv~e~-~~~~af~d~~p~~p---------------------gh-~lViPk~H~~~l~dl~~~~~ 61 (149)
T 3o0m_A 5 MSCVFCAIVSGDAPAIRIYED-ENFLGILDIRPFTR---------------------GH-TLVIPKTHTVDLTDTPPETV 61 (149)
T ss_dssp TTCHHHHHHTTSSCCCEEEEC-SSEEEEECSSCSST---------------------TC-EEEEESSCCCSTTTSCHHHH
T ss_pred CCCccCccccCCCCCCEEEEC-CCEEEEEcCCCCCC---------------------Ce-EEEEechhhCCHhHCCHHHH
Confidence 47999964332211 12223 35888999999752 23 45667899999999999999
Q ss_pred HHHHHHHHHHHHHhccC---CceEEEeeecCcCCCCCCCccccceee
Q psy10444 169 RKVIDTWVDETASLGKT---YEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 169 ~~vl~~~~~r~~~l~~~---i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
..++.+.+.-.+.|.+. ..=+.+.-|.|+.+|.+..|.|.+|+.
T Consensus 62 ~~l~~~~~~v~~~l~~~~~~~~~~ni~~n~g~~aGq~v~HlHiHiiP 108 (149)
T 3o0m_A 62 AGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVP 108 (149)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCSEEEEECCCSGGGTCCSSSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCCCccceEEEEEEC
Confidence 99998887766655422 223467789999999999999999886
No 33
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=97.78 E-value=1.5e-05 Score=65.97 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=67.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHH
Q psy10444 90 DPKNPLCPTATRG--NGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEE 167 (341)
Q Consensus 90 ~~~CPFCpg~e~~--~~~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~ 167 (341)
...|.||.--..+ ..-+.++ ..+.+|-|.||... ..++|..-+|..++.+++.++
T Consensus 14 ~~~CiFC~i~~~e~~~~iv~e~-e~~~af~d~~P~~p----------------------gH~LViPk~H~~~l~dL~~~e 70 (126)
T 3o1c_A 14 GGDTIFGKIIRKEIPAKIIFED-DQALAFHDISPQAP----------------------THFLVIPKKHISQISAAEDAD 70 (126)
T ss_dssp TCSSHHHHHHHTSSCCCEEEEC-SSEEEEECSSCSSS----------------------EEEEEEESSCCCCGGGCCGGG
T ss_pred CCCCCcchhhcCCCcCCEEEEC-CCEEEEECCCCCCC----------------------ceEEEEechHhchHhhCchhH
Confidence 4579999643211 1112233 36899999999751 237777899999999999887
Q ss_pred H---HHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCccccceeec
Q psy10444 168 I---RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWAS 213 (341)
Q Consensus 168 i---~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPHsQiia~ 213 (341)
. ..++.+.+.-.+.+...-.| .+.-|.|+.||.|+.|-|..|+.-
T Consensus 71 ~~~l~~l~~~~~~~~~~~~~~~g~-ni~~n~g~~agq~v~HlH~Hiipr 118 (126)
T 3o1c_A 71 ESLLGHLMIVGKKCAADLGLKKGY-RMVVNEGSDGGQSVYHVHLHVLGG 118 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCE-EEECCCHHHHTCCSSSCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe-EEEEecCCccCCccCEeEEEEeCC
Confidence 4 44444444444444322244 467899999999999999999864
No 34
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=97.77 E-value=2.5e-05 Score=66.30 Aligned_cols=99 Identities=10% Similarity=0.066 Sum_probs=71.2
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHH
Q psy10444 91 PKNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168 (341)
Q Consensus 91 ~~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i 168 (341)
..|+||.-.....+ -+.++ ..+.+|-+.+|... .| ++|..-+|..++.+|+.+++
T Consensus 9 ~~CifC~i~~~e~~~~iV~e~-~~~~a~~d~~p~~p---------------------gh-~lViPk~H~~~l~dL~~~e~ 65 (147)
T 3imi_A 9 DNCIFCKIIDGQILCSKVYED-EHVLAFLDISQVTK---------------------GH-TLVIPKVHKQDIFALTPEIA 65 (147)
T ss_dssp GGCHHHHHHTTSSCCCEEEEC-SSEEEEECTTCSST---------------------TC-EEEEESSCCCSGGGCCHHHH
T ss_pred CCCcCcccccCCCcCCEEEEC-CCEEEEEcCCCCCC---------------------cE-EEEEEeeccCChhhCCHHHH
Confidence 36999975432211 12233 25888989998752 23 45557899999999999999
Q ss_pred HHHHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 169 RKVIDTWVDETASLGK--TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 169 ~~vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
..++.+.+.-.+.+.+ +..=+.+.-|.|+.+|.+..|.|.+|+.
T Consensus 66 ~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~aGq~v~HlHiHiiP 111 (147)
T 3imi_A 66 SHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIP 111 (147)
T ss_dssp HHHHHTHHHHHHHHHHHHCCSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEeCCcccCCCcCEEEEEEeC
Confidence 9999888776666542 2223457788899999999999999876
No 35
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=97.75 E-value=3.7e-05 Score=65.22 Aligned_cols=97 Identities=11% Similarity=0.128 Sum_probs=69.2
Q ss_pred CCCCCCCCCC--CCCCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHH
Q psy10444 93 NPLCPTATRG--NGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRK 170 (341)
Q Consensus 93 CPFCpg~e~~--~~~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~ 170 (341)
|.||--.... +.-+.++ ..+.+|-+.+|... .| ++|..-+|..++.+|+.+++..
T Consensus 1 CiFC~i~~~e~~~~iv~e~-~~~~a~~d~~p~~p---------------------gh-~lViPk~H~~~~~dL~~~e~~~ 57 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYED-EKFAAILDKYPVSL---------------------GH-TLVIPKKHFENYLEADEDTLAE 57 (149)
T ss_dssp CHHHHHHTTSSCCCEEEEC-SSEEEEECSSCSST---------------------TC-EEEEESSCCSSGGGSCHHHHHH
T ss_pred CcCcccccCCCCccEEEEC-CCEEEEECCCCCCC---------------------Ce-EEEEechhhCCHhHCCHHHHHH
Confidence 8888532111 1112223 35888989999751 23 4455788999999999999999
Q ss_pred HHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 171 VIDTWVDETASLGK--TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 171 vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
++.+.+.-.+.|.. ...=+.+.-|.|+.+|.+..|-|.+|+.
T Consensus 58 l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v~HlHiHviP 101 (149)
T 2eo4_A 58 LAKVVKLVSLGIKDAVKADGLRLLTNIGRSAGQVIFHLHVHIIP 101 (149)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSCSCCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEecCcCCCCCcCEEEEEEEC
Confidence 99888876666642 2224567788899999999999999985
No 36
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=97.72 E-value=2e-05 Score=66.46 Aligned_cols=99 Identities=11% Similarity=0.071 Sum_probs=69.3
Q ss_pred CCCCCCCCC--CCCCCCCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHH
Q psy10444 91 PKNPLCPTA--TRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168 (341)
Q Consensus 91 ~~CPFCpg~--e~~~~~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i 168 (341)
..|+||.-. +....-+.++ ..+.+|-+.+|... .| ++|..-+|..++.+|+.+++
T Consensus 5 ~~C~fC~i~~~e~~~~iv~e~-~~~~a~~~~~p~~p---------------------gh-~LViPk~h~~~l~dL~~~~~ 61 (145)
T 1y23_A 5 ENCIFCKIIAGDIPSAKVYED-EHVLAFLDISQVTK---------------------GH-TLVIPKTHIENVYEFTDELA 61 (145)
T ss_dssp CCCHHHHHHHTSSCCCEEEEC-SSEEEEECTTCSST---------------------TC-EEEEESSCCSSGGGCCHHHH
T ss_pred CCCcCCccccCCCCCCEEEEC-CCEEEEECCCCCCC---------------------Ce-EEEEEhhhhhhHHhCCHHHH
Confidence 369999732 2111112223 25888989999752 23 44557799999999999999
Q ss_pred HHHHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 169 RKVIDTWVDETASLGK--TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 169 ~~vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
..++.+.+.-.+.+.. +..=+.+.-|.|+.+|.+..|-|.+|+.
T Consensus 62 ~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~g~~v~HlH~HiiP 107 (145)
T 1y23_A 62 KQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIP 107 (145)
T ss_dssp HTTTTHHHHHHHHHHHHHCCSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEcCCcCCCCCcCEEEEEEEc
Confidence 9888777765555542 2223456778899999999999999985
No 37
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=97.71 E-value=4.1e-05 Score=65.34 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=66.0
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHH-
Q psy10444 91 PKNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEE- 167 (341)
Q Consensus 91 ~~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~- 167 (341)
..|+||.-...+.+ -+.++ ..+.+|-|.||.. -..++|..-+|..++.+|+.++
T Consensus 35 ~~CiFC~ii~~e~~~~iV~e~-e~~~af~d~~P~~----------------------pgH~LViPkrHv~~l~dL~~~e~ 91 (147)
T 1xqu_A 35 ENCVFCKIIKRELPSTIYYED-ERVIAIKDINPAA----------------------PVHVLIIPKEHIANVKEINESNA 91 (147)
T ss_dssp TTCHHHHHHTTSSCBCEEEEC-SSEEEEECSSCSS----------------------SEEEEEEESSCCSSGGGCCTTTT
T ss_pred CCCcccccccCCCCcEEEEEC-CcEEEEEecCCCC----------------------ccEEEEEeCcccCChhHCCHHHH
Confidence 47999974321111 12233 3588999999975 2456677889999999998776
Q ss_pred --HHHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCccccceee
Q psy10444 168 --IRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 168 --i~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
+..++.+.+.-.+.+.....-..+..|.|+.+|.+..|-|.+|+.
T Consensus 92 ~~l~~l~~~~~~v~~~~~~~~~gyni~~n~g~~aGq~v~HlHlHiiP 138 (147)
T 1xqu_A 92 QILIDIHKAANKVAEDLGIAEKGYRLITNCGVAAGQTVFHLHYHLLG 138 (147)
T ss_dssp THHHHHHHHHHHHHHHTTCTTTCEEEECCCSTTTTCCSCSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEEecCcccCCCccEEEEEEeC
Confidence 455555444333333311222357789999999999999999985
No 38
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=97.55 E-value=0.00018 Score=71.04 Aligned_cols=99 Identities=17% Similarity=0.095 Sum_probs=71.8
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHH
Q psy10444 90 DPKNPLCPTATRGNGE-VNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168 (341)
Q Consensus 90 ~~~CPFCpg~e~~~~~-~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i 168 (341)
...|+||.+... ... +.++ ..+.+|-+.+|... .| ++|..-+|..++.+|+.+++
T Consensus 296 ~~~c~fc~~e~p-~~~iv~e~-~~~~a~~~~~p~~p---------------------gh-~lviPk~h~~~~~~l~~~~~ 351 (440)
T 1ems_A 296 TGGLKFARFNIP-ADHIFYST-PHSFVFVNLKPVTD---------------------GH-VLVSPKRVVPRLTDLTDAET 351 (440)
T ss_dssp SSCCEETTEECC-GGGEEEEC-SSEEEEECSSCSST---------------------TC-EEEEESSCCSCGGGSCHHHH
T ss_pred cCceeeeccccC-CceEEEEC-CCEEEEEcCCcCCC---------------------Ce-EEEEEccccCChhHCCHHHH
Confidence 457999984221 111 1333 25888888888741 24 44557789999999999999
Q ss_pred HHHHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 169 RKVIDTWVDETASLGK--TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 169 ~~vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
..++.+.+.-.+.+.+ ...=+.+.-|.|+.+|.+..|-|..|+.
T Consensus 352 ~~l~~~~~~v~~~l~~~~~~~~~n~~~~~g~~~gq~v~HlH~Hiip 397 (440)
T 1ems_A 352 ADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILP 397 (440)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSSSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCCCccEEEEEEeC
Confidence 9999888877766652 2234567789999999999999999986
No 39
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=97.51 E-value=9.4e-05 Score=64.81 Aligned_cols=100 Identities=13% Similarity=0.107 Sum_probs=71.7
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHH
Q psy10444 90 DPKNPLCPTATRGNG--EVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEE 167 (341)
Q Consensus 90 ~~~CPFCpg~e~~~~--~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~ 167 (341)
...|+||.-.....+ -+.++ ..+.+|-+.+|... .| ++|..-+|..++.+|+.++
T Consensus 35 m~~CiFC~Ii~~e~p~~iV~e~-e~~~afld~~P~~p---------------------gH-~LVIPkrHv~~l~dL~~ee 91 (173)
T 3l7x_A 35 MNDCLFCKIVAGDIPSSKVYED-EDVLAFLDISQATK---------------------GH-TLVIPKEHVRNALEMTQTQ 91 (173)
T ss_dssp CTTCHHHHHHHTSSCCCEEEEC-SSEEEEECTTCSST---------------------TC-EEEEESSCCSCGGGCCHHH
T ss_pred CCCCcccccccCCCCceEEEEC-CCEEEEEcCCCCCC---------------------cE-EEEEeccccCChhhCCHHH
Confidence 357999985432211 12233 25888999998751 24 4455789999999999999
Q ss_pred HHHHHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 168 IRKVIDTWVDETASLGK--TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 168 i~~vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
+..++.+.+.-.+.|.. ...=+.+.-|.|+.+|.+..|-|..|+.
T Consensus 92 ~~~L~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~HlHiHiIP 138 (173)
T 3l7x_A 92 AANLFARIPKIARALQKATKADGLNIINNNEETAGQTVFHAHVHLVP 138 (173)
T ss_dssp HHHHHHTHHHHHHHHHHHHTCSEEEEEECCSGGGTCCSCSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCcCEEEEEEEe
Confidence 99999888776666642 2223456779999999999999999885
No 40
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=97.42 E-value=0.00011 Score=66.74 Aligned_cols=99 Identities=15% Similarity=0.090 Sum_probs=69.5
Q ss_pred CCCCCCCCCCCC-C--CCCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHH
Q psy10444 91 PKNPLCPTATRG-N--GEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEE 167 (341)
Q Consensus 91 ~~CPFCpg~e~~-~--~~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~ 167 (341)
+.|+||.-.... . --+.++ ..+.+|-|+||... .| ++|..-+|..++.+|+.++
T Consensus 69 ~~CiFC~i~~~e~~~~~iV~ed-d~~~afld~~P~~p---------------------GH-~LVIPkrHv~~l~dL~~ee 125 (218)
T 3ano_A 69 PAQPFTEIPQLSDEEGLVVARG-KLVYAVLNLYPYNP---------------------GH-LMVVPYRRVSELEDLTDLE 125 (218)
T ss_dssp -CCHHHHGGGSCHHHHTEEEEC-SSEEEEECSSCSST---------------------TC-EEEEESSCCCCGGGSCHHH
T ss_pred CCCcCcccccCCCCCceEEEEC-CcEEEEEccCCCCC---------------------cE-EEEEechhhCChhhCCHHH
Confidence 479999644321 0 012233 36899999999852 23 4455678999999999999
Q ss_pred HHHHHHHHHHHHHHhcc--CCceEEEeeecCcCCCCCC-Cccccceee
Q psy10444 168 IRKVIDTWVDETASLGK--TYEWVQIFENKGAIMGCSN-PHPHCQVWA 212 (341)
Q Consensus 168 i~~vl~~~~~r~~~l~~--~i~Yv~iFkN~G~~aGaSl-~HPHsQiia 212 (341)
...+..+.+.-.+.|.+ ...=+.+.-|.|+.+|.++ .|-|.+|+.
T Consensus 126 ~~~L~~l~~~v~~~l~~~~~~~g~ni~~n~G~~aGq~V~~HlHiHIIP 173 (218)
T 3ano_A 126 SAELMAFTQKAIRVIKNVSRPHGFNVGLNLGTSAGGSLAEHLHVHVVP 173 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSEEEEEEEESGGGTCTTTTSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCcccCEEEEEEEc
Confidence 98888877765555542 1223456668899999999 999999986
No 41
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=97.35 E-value=6.6e-05 Score=62.77 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=68.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHH
Q psy10444 90 DPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIR 169 (341)
Q Consensus 90 ~~~CPFCpg~e~~~~~~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~ 169 (341)
...|+||.-......-+.++ ..+.+|-|.+|... ..++|..-+|..++.+|+.+++.
T Consensus 5 ~~~C~fC~i~~~~~~iv~e~-~~~~af~d~~p~~p----------------------gh~lViPk~H~~~l~dL~~~~~~ 61 (135)
T 3r6f_A 5 MEGCIFCTLYRKGANIIYET-DRLFALIDRYPLSK----------------------GHFLVIPKAHHPYLHNYKPEELS 61 (135)
T ss_dssp -CCCHHHHHHHHCCSCCEEC-SSEEEEECSSCSST----------------------TCEEEEESSCCSSGGGSCGGGGT
T ss_pred CCCCcCcccccCCceEEEEC-CCEEEEECCCCCCC----------------------CeEEEEEhhHhCCHhHCCHHHHH
Confidence 35799997543101112333 35899999999752 23456678999999999999999
Q ss_pred HHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCccccceee
Q psy10444 170 KVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 170 ~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
.++.+.+.-.+.+... . ..+..|.|+ |.+..|-|.+|+-
T Consensus 62 ~l~~~~~~v~~~~~~~-~-~ni~~n~g~--gq~v~HlH~HiiP 100 (135)
T 3r6f_A 62 GVLDTIRHLVQKFGFE-R-YNILQNNGN--HQEVFHVHFHVIP 100 (135)
T ss_dssp THHHHHHHHHHHHTCC-S-EEEECCSSS--SCSSSSCCEEEEE
T ss_pred HHHHHHHHHHHHhCCC-C-eEEEEEcCC--CCCccEEEEEEec
Confidence 9998877666656532 3 356678898 9999999999874
No 42
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=97.30 E-value=0.00028 Score=60.18 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=71.9
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHH
Q psy10444 91 PKNPLCPTATRGNGE--VNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168 (341)
Q Consensus 91 ~~CPFCpg~e~~~~~--~~~~~~~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i 168 (341)
.+|.||.=-..+.+. +.++ ..+.+|-+.+|... -.++|...+|..++.+|+.+++
T Consensus 11 ~~~iFc~Ii~geip~~iV~ed-~~~~af~d~~P~~p----------------------gH~LViPk~H~~~l~dL~~~e~ 67 (149)
T 3ksv_A 11 ANCIFCKIIKGDIPCAKVAET-SKALAFMDINPLSR----------------------GHMLVIPKEHASCLHELGMEDA 67 (149)
T ss_dssp TTCHHHHHHHTSSCCCEEEEC-SSEEEEECSSCSST----------------------TCEEEEESSCCSSGGGSCHHHH
T ss_pred ccCHHHHHHcCCCCccEEEEC-CCEEEEECCCCCCC----------------------CEEEEEeChhhhhhhhCCHHHH
Confidence 479999743222111 2233 25888999999752 2355667899999999999999
Q ss_pred HHHHHHHHHHHHHhccCC--ceEEEeeecCcCCCCCCCcccccee
Q psy10444 169 RKVIDTWVDETASLGKTY--EWVQIFENKGAIMGCSNPHPHCQVW 211 (341)
Q Consensus 169 ~~vl~~~~~r~~~l~~~i--~Yv~iFkN~G~~aGaSl~HPHsQii 211 (341)
..++.+.+.-.+.++... .=..+..|.|+.+|.+..|-|..|+
T Consensus 68 ~~l~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~v~HlHiHii 112 (149)
T 3ksv_A 68 ADVGVLLAKASRAVAGPDGSMQYNVLQNNGSLAHQEVPHVHFHII 112 (149)
T ss_dssp HHHHHHHHHHHHHHHCTTSCCEEEEEECCSTTTTCCSSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEEecCcccCCCCCEEEEEEE
Confidence 999998887777775321 2234667999999999999999999
No 43
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=97.24 E-value=0.00013 Score=62.15 Aligned_cols=40 Identities=15% Similarity=0.324 Sum_probs=37.7
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy10444 1 MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVS 40 (341)
Q Consensus 1 ~i~Pkr~~~~l~~~~~~e~~~la~~lk~~~~~~d~lf~~~ 40 (341)
+|+||+|++++.||+++|+.+|+.+++++.++++++|+.+
T Consensus 44 LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~ 83 (154)
T 2oik_A 44 RVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPD 83 (154)
T ss_dssp EEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred EEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999999843
No 44
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=97.20 E-value=0.00016 Score=60.38 Aligned_cols=39 Identities=18% Similarity=0.386 Sum_probs=37.1
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHHHHHhhhcCC
Q psy10444 1 MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKV 39 (341)
Q Consensus 1 ~i~Pkr~~~~l~~~~~~e~~~la~~lk~~~~~~d~lf~~ 39 (341)
+|+||||+.++.||+++|+.+|+.+++++.++++..|+.
T Consensus 43 LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 81 (138)
T 3p0t_A 43 LVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRT 81 (138)
T ss_dssp EEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 589999999999999999999999999999999999983
No 45
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=96.89 E-value=0.0034 Score=52.78 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=61.3
Q ss_pred ceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcc--CCceE
Q psy10444 112 SVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGK--TYEWV 189 (341)
Q Consensus 112 ~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~--~i~Yv 189 (341)
.+.+|-+.+|... .| ++|..-+|..++.+|+.+++..++.+.+.-.+.|.. ...=+
T Consensus 21 ~~~a~~d~~p~~p---------------------gh-~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 78 (147)
T 1fit_A 21 LSFALVNRKPVVP---------------------GH-VLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSL 78 (147)
T ss_dssp SEEEEECSSCSST---------------------TC-EEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCCCC---------------------cE-EEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 5888889998752 24 445577899999999999999999888776666642 12224
Q ss_pred EEeeecCcCCCCCCCccccceee
Q psy10444 190 QIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 190 ~iFkN~G~~aGaSl~HPHsQiia 212 (341)
.+.-|.|+.+|.+..|-|.+|+.
T Consensus 79 ni~~n~g~~agq~v~HlH~HiiP 101 (147)
T 1fit_A 79 TFSMQDGPEAGQTVKHVHVHVLP 101 (147)
T ss_dssp EEEECCSGGGTCCSSSCCEEEEE
T ss_pred EEEEecCCccCCCccEEEEEEEC
Confidence 46668899999999999999987
No 46
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=95.28 E-value=0.036 Score=52.38 Aligned_cols=85 Identities=15% Similarity=0.215 Sum_probs=67.2
Q ss_pred hhHHHHhh----hccCCeEEEECCc----EEEEecCC----CCCCceEEEEeCCC-CCCCCCCCHHHHHHHHHHHHHHHH
Q psy10444 255 SVAVWLKE----LLKRDRVVVRNPD----WVVVVPFW----AEWPFETMILPRTH-VLRFTDLDDQQRNNLADIIKKITT 321 (341)
Q Consensus 255 ~~~~~~~~----~~~~~rvV~~~~~----~~a~~p~~----~~~p~e~~I~Pk~H-~~~~~~l~~~e~~~La~~l~~v~~ 321 (341)
++-.|+.. .++.+++|++++. |++|-+.. +...-|+++||++| +.++-+|+.+.+.-|-.+.....+
T Consensus 135 ~~l~Wv~nIl~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~ 214 (301)
T 3bl9_A 135 LSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQE 214 (301)
T ss_dssp CCCHHHHHHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHH
T ss_pred cchhHHHHHhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHH
Confidence 45567743 3567899999988 99999876 77888999999877 899999999998888888777777
Q ss_pred HHHhHhC-CCCCeEEEEec
Q psy10444 322 KYDNLFK-VSFPYSMGFHV 339 (341)
Q Consensus 322 ~l~~~~~-~~~pyn~g~h~ 339 (341)
.+.+.++ ....+-||+|-
T Consensus 215 ~i~~~y~~~~~~~rlgfHy 233 (301)
T 3bl9_A 215 AILQRYRMKGDHLRVYLHY 233 (301)
T ss_dssp HHHHHHCCCGGGEEEEEES
T ss_pred HHHHhcCCChHHeEEEecC
Confidence 7777653 25578888884
No 47
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=94.98 E-value=0.049 Score=52.38 Aligned_cols=85 Identities=15% Similarity=0.225 Sum_probs=64.6
Q ss_pred hhHHHHhh----hccCCeEEEECCc----EEEEecCC----CCCCceEEEEeCCC-CCCCCCCCHHHHHHHHHHHHHHHH
Q psy10444 255 SVAVWLKE----LLKRDRVVVRNPD----WVVVVPFW----AEWPFETMILPRTH-VLRFTDLDDQQRNNLADIIKKITT 321 (341)
Q Consensus 255 ~~~~~~~~----~~~~~rvV~~~~~----~~a~~p~~----~~~p~e~~I~Pk~H-~~~~~~l~~~e~~~La~~l~~v~~ 321 (341)
++-.|+.. .++.++||++++. |++|-+.. |...-|+++||++| +.++-+|+.+.+.-|-.+...+.+
T Consensus 182 ~~l~Wv~nIl~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ 261 (350)
T 1vlr_A 182 LSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQE 261 (350)
T ss_dssp CCCHHHHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHH
T ss_pred cchhHHHHHhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHH
Confidence 44557743 3567899999987 99999876 77888999999877 899999999998888888777777
Q ss_pred HHHhHhC-CCCCeEEEEec
Q psy10444 322 KYDNLFK-VSFPYSMGFHV 339 (341)
Q Consensus 322 ~l~~~~~-~~~pyn~g~h~ 339 (341)
.+.+.++ ....+-||+|-
T Consensus 262 ii~~~yg~~~~~lRlgfHy 280 (350)
T 1vlr_A 262 AILKRYQVTGDRLRVYLHY 280 (350)
T ss_dssp HHHHHHCCCGGGEEEEEES
T ss_pred HHHHhcCCChHHeEEEecC
Confidence 7777653 25578888884
No 48
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=94.43 E-value=0.057 Score=45.88 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=45.2
Q ss_pred eEEEEecCC-CCCCcCCCCHHHHHHHHHHHHHHHHHhcc---CCceEEEeeecCcCCCCCCCccccceee
Q psy10444 147 CKVICFHPK-SNTTLPIMSIEEIRKVIDTWVDETASLGK---TYEWVQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 147 heVIi~sp~-H~~~l~~ls~~~i~~vl~~~~~r~~~l~~---~i~Yv~iFkN~G~~aGaSl~HPHsQiia 212 (341)
| ++|...+ |..++.+++.++...++.+.+.-.+.+.+ --++ |.| .+|.+.+|-|.-|+.
T Consensus 39 H-~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~-----N~~-~aGq~V~HlH~HvIP 101 (149)
T 3i4s_A 39 W-LLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKL-----NIA-ALGNLVPQLHVHIIA 101 (149)
T ss_dssp E-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE-----EEE-ECCSSCCSCCEEEEE
T ss_pred E-EEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeE-----EEe-ecCCcCCEEEEEEEC
Confidence 6 5556666 89999999999999888887766665542 1121 555 899999999999887
No 49
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=94.18 E-value=0.083 Score=43.89 Aligned_cols=73 Identities=14% Similarity=-0.048 Sum_probs=52.6
Q ss_pred ceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecC-CCCCCcCCCCHHHHHHHHHHHHHHHHHhcc--CCce
Q psy10444 112 SVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHP-KSNTTLPIMSIEEIRKVIDTWVDETASLGK--TYEW 188 (341)
Q Consensus 112 ~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp-~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~--~i~Y 188 (341)
..+|+-|++|.. . |-+|| .+ +|..++.+++.++...++...+.-.+.+.+ +..=
T Consensus 23 ~~~v~l~~~~~~---------------------p-~~lvV-pkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~ 79 (135)
T 3nrd_A 23 LCQMRLMNDRRW---------------------P-WLILV-PQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEK 79 (135)
T ss_dssp SEEEEEESCTTS---------------------C-EEEEE-ECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred cEEEEEcCCCCC---------------------C-EEEEE-cCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 467888888764 1 43444 45 799999999999988888777766555542 1111
Q ss_pred EEEeeecCcCCCCCCCccccceee
Q psy10444 189 VQIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 189 v~iFkN~G~~aGaSl~HPHsQiia 212 (341)
+ |.| .+|.+.+|-|.-|+.
T Consensus 80 ~----N~~-~aGq~V~HlH~HviP 98 (135)
T 3nrd_A 80 I----NIG-ALGNIVRQLHVHVIA 98 (135)
T ss_dssp E----EEE-ECCSSCCSCCEEEEE
T ss_pred E----EEe-eccCCCCEEEEEEec
Confidence 1 666 899999999999886
No 50
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=93.21 E-value=0.18 Score=42.03 Aligned_cols=74 Identities=8% Similarity=-0.048 Sum_probs=53.7
Q ss_pred ceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcc--CCceE
Q psy10444 112 SVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGK--TYEWV 189 (341)
Q Consensus 112 ~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~--~i~Yv 189 (341)
..+||=|++|... | | ++|-..+|..++.+++.++...++.....-.+.+.+ +..=
T Consensus 21 ~~~v~l~~~p~~p--------------------G-h-~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~- 77 (137)
T 3ohe_A 21 LCDVLLMNDNTWP--------------------W-V-ILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDK- 77 (137)
T ss_dssp SEEEEEESCTTSC--------------------E-E-EEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE-
T ss_pred cEEEEEcCCCCCC--------------------E-E-EEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCe-
Confidence 4788888888752 4 4 344444999999999999988888777665555542 1111
Q ss_pred EEeeecCcCCCCCCCccccceee
Q psy10444 190 QIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 190 ~iFkN~G~~aGaSl~HPHsQiia 212 (341)
-|.| .+|.+.+|-|..|+.
T Consensus 78 ---~N~~-~aGq~V~HlH~HviP 96 (137)
T 3ohe_A 78 ---MNVA-ALGNMVPQLHLHHIV 96 (137)
T ss_dssp ---EEEE-ECCSSCCSCCEEEEE
T ss_pred ---EEEe-eccCcCCEEEEEEeC
Confidence 2555 899999999999886
No 51
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=91.92 E-value=0.23 Score=41.98 Aligned_cols=74 Identities=15% Similarity=-0.037 Sum_probs=52.4
Q ss_pred ceeeeeCCCCccccCCCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcc--CCceE
Q psy10444 112 SVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGK--TYEWV 189 (341)
Q Consensus 112 ~vrvfpN~fPal~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~--~i~Yv 189 (341)
..+||=|++|... | |- +|-..+|..++.+++.++...++.....-.+.+.+ +..=
T Consensus 21 ~~~v~L~~~p~~p--------------------G-h~-LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~- 77 (149)
T 3i24_A 21 LCKVLLIKEDIGP--------------------W-LI-LVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDK- 77 (149)
T ss_dssp SEEEEEECBSSTT--------------------E-EE-EEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE-
T ss_pred CEEEEEcCCCCCC--------------------E-EE-EEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCe-
Confidence 5788888888752 5 53 34344599999999999988888776655555531 1111
Q ss_pred EEeeecCcCCCCCCCccccceee
Q psy10444 190 QIFENKGAIMGCSNPHPHCQVWA 212 (341)
Q Consensus 190 ~iFkN~G~~aGaSl~HPHsQiia 212 (341)
-|.| .+|.+.+|-|.-||.
T Consensus 78 ---~Ni~-~aGq~V~HlH~HvIP 96 (149)
T 3i24_A 78 ---INIG-ALGNLVPQLHIHHIA 96 (149)
T ss_dssp ---EEEE-ECCSSCCSCCEEEEE
T ss_pred ---EEEh-hhhCCCCEEEEEEeC
Confidence 2555 499999999999886
No 52
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=36.94 E-value=19 Score=31.82 Aligned_cols=47 Identities=13% Similarity=0.157 Sum_probs=38.0
Q ss_pred eeecCcCCCCCCCccccceeecCCCCChHHHHHHHHHHHHHhcCCCccchhh
Q psy10444 192 FENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYV 243 (341)
Q Consensus 192 FkN~G~~aGaSl~HPHsQiia~p~vP~~~~~el~~~~~y~~~~g~c~fc~i~ 243 (341)
+-|.|.-||-|+.|-|.-||+.++..+.++. +.+|+.-.+-+|-++-
T Consensus 104 ~i~~GfHa~PSm~HLHLHVIS~Df~s~~lK~-----kkH~NSF~T~fFv~~~ 150 (204)
T 3sp4_A 104 YIKVGFHAGPSMNNLHLHIMTLDHVSPSLKN-----SAHYISFTSPFFVKID 150 (204)
T ss_dssp TEEEEEESSCSSSSCCEEEEESCCCCTTCCS-----HHHHHHHHSTTEEETT
T ss_pred eEeccCCCCCcccceeEEEeccCCCChhhCc-----cchhcccChhhhccch
Confidence 5688999999999999999999999998764 4567766666777653
No 53
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=30.80 E-value=26 Score=27.00 Aligned_cols=24 Identities=17% Similarity=0.533 Sum_probs=19.5
Q ss_pred ccceeecccCCcEEEEccCCCCCC
Q psy10444 50 HQHVRYNPLKGEWILVSPHRMKRP 73 (341)
Q Consensus 50 ~~~~r~~pl~~~wviia~~R~~RP 73 (341)
+..+|||+.+|.||+.+|++.-..
T Consensus 18 ~~rl~~d~~~~~~VlL~peg~i~L 41 (95)
T 3g2b_A 18 GVRLQHDRARDQWVLLAPERVVEL 41 (95)
T ss_dssp TCEEEEEGGGTEEEEECCCCCCCC
T ss_pred CeEEEEeccCCcEEEECCCceeec
Confidence 446788999999999999985543
No 54
>1pu1_A Hypothetical protein MTH677; structural genomics, alpha and beta protein (A+B), unknown function; NMR {Methanothermobacterthermautotrophicus} SCOP: d.266.1.1
Probab=25.32 E-value=74 Score=24.65 Aligned_cols=26 Identities=8% Similarity=0.396 Sum_probs=22.3
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy10444 7 HVLRFTDLDDQQRNNLADIIKKITTKY 33 (341)
Q Consensus 7 ~~~~l~~~~~~e~~~la~~lk~~~~~~ 33 (341)
|++ |..||++|+.++++....+...|
T Consensus 3 h~~-L~kLSe~eL~eIse~~~~~i~~~ 28 (94)
T 1pu1_A 3 HMS-LRKLTEGDLDEISSFLHNTISDF 28 (94)
T ss_dssp -CC-CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCC-ccccCHHHHHHHHHHHHHHHHHH
Confidence 555 88999999999999999888876
No 55
>3hr5_R M1prime-derived peptide; FAB-peptide complex, immune system; 2.40A {Mus musculus}
Probab=21.96 E-value=30 Score=21.23 Aligned_cols=11 Identities=45% Similarity=0.736 Sum_probs=8.9
Q ss_pred cCCCCCCCccc
Q psy10444 197 AIMGCSNPHPH 207 (341)
Q Consensus 197 ~~aGaSl~HPH 207 (341)
+.||+|.+||-
T Consensus 23 raaggsvphpr 33 (35)
T 3hr5_R 23 RAAGGSVPHPR 33 (35)
T ss_pred cccCCCCCCCC
Confidence 46899999984
No 56
>2v1l_A Hypothetical protein; pathogenicity island, unknown function; 2.13A {Vibrio cholerae}
Probab=20.17 E-value=1.3e+02 Score=25.21 Aligned_cols=44 Identities=14% Similarity=0.315 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhh-----------hcC-CCCCCCCccc-ccc-ceeec-ccCCcEEE
Q psy10444 21 NLADIIKKITTKYDN-----------LFK-VSFPYSMGFH-EHQ-HVRYN-PLKGEWIL 64 (341)
Q Consensus 21 ~la~~lk~~~~~~d~-----------lf~-~~~pY~M~~~-~~~-~~r~~-pl~~~wvi 64 (341)
.|..+|.+++.+++. .++ ++-.|+.... +|| |||+. .-.+.|-+
T Consensus 16 ~l~~lL~~~l~~~~~~~~~~~~~~~ltlNFRD~~YSae~GGfHPVEIrl~~~~~~~W~i 74 (148)
T 2v1l_A 16 PFHALLANILSEHQAKSEVQATSKEVVMNFRDSSYSAEDGGFHPVEIALSQSSDGQWCI 74 (148)
T ss_dssp HHHHHHHHHHHHHHC---------CEEEEEECTTCBTTTBCCCCEEEEEEECSSSCEEE
T ss_pred HHHHHHHHHHHhccccccCcccCcEEEEEcCCCCcCcccCCcCCEEEEEEecCCCcEEE
Confidence 455555555555553 455 5666887333 576 89999 67777776
Done!