BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10446
(158 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328707620|ref|XP_001947296.2| PREDICTED: cysteine protease ATG4B-like isoform 1 [Acyrthosiphon
pisum]
gi|328707622|ref|XP_003243448.1| PREDICTED: cysteine protease ATG4B-like isoform 2 [Acyrthosiphon
pisum]
gi|328707624|ref|XP_003243449.1| PREDICTED: cysteine protease ATG4B-like isoform 3 [Acyrthosiphon
pisum]
gi|328707626|ref|XP_003243450.1| PREDICTED: cysteine protease ATG4B-like isoform 4 [Acyrthosiphon
pisum]
Length = 402
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 88/112 (78%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W+ + ++ YLKIL+MFED+R+APYSIHQIAL G S GK VGEWFGPNT+AQVL+
Sbjct: 114 GRDWRWDPDKRDIDYLKILRMFEDKRSAPYSIHQIALMGVSHGKQVGEWFGPNTIAQVLK 173
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
KLA D+ SS+VFHVALDNTLV+N+VKKLCT ++ + W +V + L
Sbjct: 174 KLATMDELSSLVFHVALDNTLVINEVKKLCTVMEQTNSSKQIWKPLVLVIPL 225
>gi|328722655|ref|XP_003247627.1| PREDICTED: cysteine protease ATG4B-like [Acyrthosiphon pisum]
Length = 252
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 88/112 (78%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W+ + ++ YLKIL+MFED+R+APYSIHQIAL G S GK VGEWFGPNT+AQVL+
Sbjct: 114 GRDWRWDPDKRDIDYLKILRMFEDKRSAPYSIHQIALMGVSHGKQVGEWFGPNTIAQVLK 173
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
KLA D+ SS+VFHVALDNTLV+N+VKKLCT ++ + W +V + L
Sbjct: 174 KLATMDELSSLVFHVALDNTLVINEVKKLCTVMEQTNSSKQIWKPLVLVIPL 225
>gi|242007959|ref|XP_002424782.1| Cysteine protease ATG4A, putative [Pediculus humanus corporis]
gi|212508305|gb|EEB12044.1| Cysteine protease ATG4A, putative [Pediculus humanus corporis]
Length = 388
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 88/123 (71%), Gaps = 4/123 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W +SKE YL+ILKMFED +TA YSIHQIAL G SEGK VG+WFGPNTV QVL+
Sbjct: 95 GRDWRWKKDSKEPEYLRILKMFEDTKTATYSIHQIALMGVSEGKDVGQWFGPNTVTQVLK 154
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALDNTLVVNQ 146
KL+ YD WSSIV HVALDNT++VN +K LC N++ + SS H L+ + N
Sbjct: 155 KLSVYDKWSSIVIHVALDNTIIVNDIKSLCQRNEQSVID----SSAQKHSPLNEPVYFNS 210
Query: 147 VKK 149
+K
Sbjct: 211 ARK 213
>gi|383861144|ref|XP_003706046.1| PREDICTED: cysteine protease ATG4B-like [Megachile rotundata]
Length = 384
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 76/101 (75%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQW ++ YLKIL+ FEDRRTAP+SIHQIA GASEGK VG+WFGPNT+AQVL+
Sbjct: 92 GRDWQWTPETRNSTYLKILERFEDRRTAPFSIHQIASMGASEGKEVGQWFGPNTIAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD 127
KL YDDWSSI HVALDNTL+VN + + C A+ D
Sbjct: 152 KLVVYDDWSSITIHVALDNTLIVNDILRQCRVEGGTTAEAD 192
>gi|209969827|ref|NP_001123274.2| autophagy-specific gene 4 [Nasonia vitripennis]
Length = 405
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 75/101 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W ++ YL IL+ FEDRR APYSIHQIAL GASEGK VG+WFGPNT+AQVL+
Sbjct: 122 GRDWRWTPETRSSTYLNILRRFEDRRAAPYSIHQIALMGASEGKDVGQWFGPNTIAQVLK 181
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD 127
KL YDDWSSI HVALDNTLVVN V + C A+ D
Sbjct: 182 KLVVYDDWSSITIHVALDNTLVVNDVVQQCRVEGATTAEVD 222
>gi|380023311|ref|XP_003695467.1| PREDICTED: cysteine protease ATG4B-like [Apis florea]
Length = 382
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 75/90 (83%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQWN+ ++ YLKIL+ FED+R AP+SIHQIAL GASEGK VG+WFGPNTVAQVL+
Sbjct: 92 GRDWQWNLETRNSTYLKILERFEDKRNAPFSIHQIALMGASEGKEVGQWFGPNTVAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +D+WSSI HVALDNTL+VN + K C
Sbjct: 152 KLVVFDEWSSITIHVALDNTLIVNDILKQC 181
>gi|66529516|ref|XP_624577.1| PREDICTED: cysteine protease ATG4B [Apis mellifera]
Length = 382
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 75/90 (83%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQW++ ++ YLKIL+ FED+R AP+SIHQIAL GASEGK VG+WFGPNTVAQVL+
Sbjct: 92 GRDWQWSLETRNSTYLKILERFEDKRNAPFSIHQIALMGASEGKEVGQWFGPNTVAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +D+WSSI HVALDNTL+VN + K C
Sbjct: 152 KLVVFDEWSSITIHVALDNTLIVNDILKQC 181
>gi|322795203|gb|EFZ18025.1| hypothetical protein SINV_08608 [Solenopsis invicta]
Length = 403
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G+DWQW +K YLKIL FED+R A +SIHQIALTGASEGK VG+WFGPNT+AQVL+
Sbjct: 92 GKDWQWMPETKNNTYLKILSRFEDKRAAAFSIHQIALTGASEGKEVGQWFGPNTIAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD 127
KL YD+WSS+ HVALDNTL+VN + K C + A+ D
Sbjct: 152 KLIVYDEWSSLTIHVALDNTLIVNDILKQCRIEGGETAEAD 192
>gi|91083193|ref|XP_972923.1| PREDICTED: similar to Autophagy-specific protein, putative
[Tribolium castaneum]
gi|270006970|gb|EFA03418.1| hypothetical protein TcasGA2_TC013405 [Tribolium castaneum]
Length = 366
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 79/112 (70%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W +K+ YLKIL F D+R AP+SIHQIA+ G SE K VG+WFGPNTVAQVL+
Sbjct: 93 GRDWVWEPETKDSTYLKILSKFVDKRQAPFSIHQIAMMGVSENKEVGQWFGPNTVAQVLK 152
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
KL KYD+WS+I H+ALDNTL+++ +++LC + DW ++ V L
Sbjct: 153 KLVKYDEWSAIEMHIALDNTLIISDIRELCLSQGSDGCSSGDWKPLLLIVPL 204
>gi|350425106|ref|XP_003494013.1| PREDICTED: cysteine protease ATG4B-like [Bombus impatiens]
Length = 383
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQW ++ YLKIL+ FED+RTA +SIHQIA GASEGK VG+WFGPNT+AQVL+
Sbjct: 92 GRDWQWTAETRNSTYLKILERFEDKRTAAFSIHQIASMGASEGKEVGQWFGPNTIAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +D+WSSI HVALDNTL+VN + K C
Sbjct: 152 KLVVFDEWSSITIHVALDNTLIVNDILKQC 181
>gi|340709295|ref|XP_003393246.1| PREDICTED: cysteine protease ATG4B-like isoform 1 [Bombus
terrestris]
Length = 383
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQW ++ YLKIL+ FED+RTA +SIHQIA GASEGK VG+WFGPNT+AQVL+
Sbjct: 92 GRDWQWTAETRNSTYLKILERFEDKRTAAFSIHQIASMGASEGKEVGQWFGPNTIAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +D+WSSI HVALDNTL+VN + K C
Sbjct: 152 KLVVFDEWSSITIHVALDNTLIVNDILKQC 181
>gi|340709297|ref|XP_003393247.1| PREDICTED: cysteine protease ATG4B-like isoform 2 [Bombus
terrestris]
Length = 386
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQW ++ YLKIL+ FED+RTA +SIHQIA GASEGK VG+WFGPNT+AQVL+
Sbjct: 95 GRDWQWTAETRNSTYLKILERFEDKRTAAFSIHQIASMGASEGKEVGQWFGPNTIAQVLK 154
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +D+WSSI HVALDNTL+VN + K C
Sbjct: 155 KLVVFDEWSSITIHVALDNTLIVNDILKQC 184
>gi|307190831|gb|EFN74681.1| Cysteine protease ATG4B [Camponotus floridanus]
Length = 115
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%)
Query: 24 SFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
+F +DWQW +K YLKIL FED+R A +SIHQIAL GASEGK VG+WFGPNT+AQ
Sbjct: 11 TFPCKDWQWMPETKNSTYLKILSRFEDKRAAAFSIHQIALMGASEGKEVGQWFGPNTIAQ 70
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAK 125
VL+KL YD+WSSI HVALDNTL++N + K +K L+K
Sbjct: 71 VLKKLVVYDEWSSITIHVALDNTLIINDICKYAVISKSPLSK 112
>gi|332029697|gb|EGI69576.1| Cysteine protease ATG4B [Acromyrmex echinatior]
Length = 383
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 75/101 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G+DWQW +K YLKIL+ FED+R A +SIHQIAL GASEGK VG+WFGPNT+AQVL+
Sbjct: 92 GKDWQWMPETKNNTYLKILRRFEDKRAAAFSIHQIALMGASEGKEVGQWFGPNTIAQVLK 151
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD 127
KL YD+WSS+ HVALDNTL+VN + + C A+ D
Sbjct: 152 KLIVYDEWSSLTIHVALDNTLIVNDILRQCRVEGGVTAEAD 192
>gi|332375955|gb|AEE63118.1| unknown [Dendroctonus ponderosae]
Length = 370
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 78/112 (69%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQWN +++ YL ILK FED R AP+SIHQIA G SEGK VG+WFGPNTVAQVL+
Sbjct: 101 GRDWQWNPTTRDATYLSILKKFEDSRKAPFSIHQIASMGISEGKEVGQWFGPNTVAQVLK 160
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
KL K+D+ + + HVALDN +++++++ LC + + W ++ V L
Sbjct: 161 KLVKFDEGNDVAIHVALDNVVIISEIRDLCLSKETADVSTPHWKPLLLIVPL 212
>gi|405972565|gb|EKC37327.1| Cysteine protease ATG4B [Crassostrea gigas]
Length = 405
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+WN N +++ Y +IL+MF D+++A YSI QIA G SEGK VG WFGPNTVAQVL+
Sbjct: 98 GRDWKWNKNCQDQTYKRILQMFADKKSANYSIQQIASMGVSEGKPVGSWFGPNTVAQVLK 157
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKR 121
KLA YD+WSSIV H+A+DNT++ N +K +C + +
Sbjct: 158 KLAVYDEWSSIVIHIAMDNTVIENDIKSVCKDDGK 192
>gi|170036509|ref|XP_001846106.1| Autophagy-specific protein [Culex quinquefasciatus]
gi|167879174|gb|EDS42557.1| Autophagy-specific protein [Culex quinquefasciatus]
Length = 379
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQVL 85
GRDW+W +++E YL+I+ FED + AP+S+HQIALTG +SE K VGEWFGPNTVAQVL
Sbjct: 84 GRDWEWTAETRDETYLRIVNRFEDNKAAPFSLHQIALTGESSEEKRVGEWFGPNTVAQVL 143
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KL K+DDW S+V HVALD+TL ++V +LC
Sbjct: 144 KKLVKFDDWCSVVVHVALDSTLATDEVVELC 174
>gi|427783027|gb|JAA56965.1| Putative cysteine protease required for autophagy [Rhipicephalus
pulchellus]
Length = 390
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 73/90 (81%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G+DWQW+ +K+E YL++L+MF+D++ YSIHQIA G SEGK VG+WFGPNT+A VLR
Sbjct: 95 GKDWQWSPGTKDEKYLRVLRMFQDKKNCTYSIHQIAQMGVSEGKEVGQWFGPNTIAHVLR 154
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL+ +D WSS+ HVA+DN +V++ ++K+C
Sbjct: 155 KLSTFDKWSSLAMHVAMDNVVVMDDIRKIC 184
>gi|157115549|ref|XP_001658259.1| Autophagy-specific protein, putative [Aedes aegypti]
gi|108876876|gb|EAT41101.1| AAEL007228-PA [Aedes aegypti]
Length = 389
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQVL 85
GRDW W + E YLKI+ FED + AP+S+HQIALTG +SE K VGEWFGPNTVAQVL
Sbjct: 95 GRDWSWTPETTNETYLKIVNRFEDSKAAPFSLHQIALTGESSEEKRVGEWFGPNTVAQVL 154
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KL K+DDW S+V HVALDNTL ++V +LC
Sbjct: 155 KKLVKFDDWCSLVIHVALDNTLATDEVLELC 185
>gi|406042044|gb|AFS31124.1| autophagy related protein Atg4-like protein, partial [Spodoptera
litura]
Length = 365
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 71/94 (75%)
Query: 29 DWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
DW W +++ YLKI++ FE+R+ APYSIHQ+AL GASEGK VG+WFGPNTVAQVL+KL
Sbjct: 81 DWVWTPETRDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKQVGQWFGPNTVAQVLKKL 140
Query: 89 AKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRK 122
YD WSS+V HVALDNT+V + + C N +
Sbjct: 141 TVYDKWSSLVIHVALDNTVVKEDILQQCVVNNDR 174
>gi|390365223|ref|XP_785967.3| PREDICTED: cysteine protease ATG4B-like [Strongylocentrotus
purpuratus]
Length = 390
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 71/93 (76%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W ++E YLKIL++F D++ + +SIHQIA G EGK VG+WFGPNTV QV+R
Sbjct: 115 GRDWRWRPQEQDETYLKILQLFLDKKDSCFSIHQIAQMGVGEGKKVGDWFGPNTVGQVIR 174
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
KL+ +D WS + HVALDNT+V+ ++KLCT N
Sbjct: 175 KLSPFDSWSDLAVHVALDNTVVIEDIRKLCTVN 207
>gi|291226947|ref|XP_002733451.1| PREDICTED: Autophagy-specific gene 4-like [Saccoglossus
kowalevskii]
Length = 356
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR+W+W + E Y KILK+F DR+ + YSIHQIA G EGK++G+WFGPNTVAQVL
Sbjct: 93 GREWRWESREHQNETYCKILKLFLDRKDSCYSIHQIAQMGVGEGKSIGQWFGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
RKL +DDWSSI H+++DNT+VV ++KLC T
Sbjct: 153 RKLTLFDDWSSIAVHISMDNTIVVEDIRKLCRT 185
>gi|339249735|ref|XP_003373855.1| cysteine protease ATG4B [Trichinella spiralis]
gi|316969943|gb|EFV53966.1| cysteine protease ATG4B [Trichinella spiralis]
Length = 410
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 73/91 (80%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR+WQW+ + ++EAY++IL+MF+D++ YSIH IA G SEGK +G+WFGP+T+A V++
Sbjct: 101 GREWQWSPSCRDEAYVRILRMFQDKKNELYSIHMIAKMGESEGKEIGKWFGPSTIAHVIK 160
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCT 117
KLA YDDWSS+ HVA+DN +V VKKLC+
Sbjct: 161 KLAIYDDWSSLAVHVAMDNVIVQEDVKKLCS 191
>gi|346466653|gb|AEO33171.1| hypothetical protein [Amblyomma maculatum]
Length = 401
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 71/90 (78%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G+ WQW ++E YL++L+MF+D++ YSIHQIA G SEGKAVG+WFGPNT+A VLR
Sbjct: 108 GKGWQWAPGIRDENYLRVLRMFQDKKNCTYSIHQIAQMGVSEGKAVGQWFGPNTIAHVLR 167
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL+ +D WSS+ HVA+DN +V++ ++K+C
Sbjct: 168 KLSAFDKWSSLAVHVAMDNVVVMDDIRKIC 197
>gi|291202714|dbj|BAI82576.1| autophagy-related 4 [Haemaphysalis longicornis]
Length = 387
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 71/89 (79%)
Query: 28 RDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
R WQW ++E+YL++L+MF+D++ +SIHQIA G SEGKAVG+WFGPNTVA VLRK
Sbjct: 96 RGWQWAPGIRDESYLRVLRMFQDKKNCTFSIHQIAQMGVSEGKAVGQWFGPNTVAHVLRK 155
Query: 88 LAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
LA +D WSS+ HVA+DN ++++ ++K+C
Sbjct: 156 LAAFDKWSSLAIHVAMDNVVIMDDIRKVC 184
>gi|260795879|ref|XP_002592932.1| hypothetical protein BRAFLDRAFT_275700 [Branchiostoma floridae]
gi|229278156|gb|EEN48943.1| hypothetical protein BRAFLDRAFT_275700 [Branchiostoma floridae]
Length = 380
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 75/95 (78%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W + Y KIL++F D++ + YSIHQIA G SEGK+VG+WFGPNTVAQVL+
Sbjct: 98 GRDWRWKSAVYDNDYTKILQLFLDKKDSCYSIHQIAQMGVSEGKSVGQWFGPNTVAQVLK 157
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKR 121
KLA ++DWSS+ HVA+DNT++++ +KKLC + ++
Sbjct: 158 KLALFEDWSSLAIHVAMDNTVIIDDIKKLCRSARQ 192
>gi|357620505|gb|EHJ72670.1| putative Autophagy-specific protein [Danaus plexippus]
Length = 383
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 69/94 (73%)
Query: 29 DWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
DW W +++ YLKI++ E+R+ APYSIHQ+AL GA EGK VG+WFGPNTVAQVL+KL
Sbjct: 98 DWVWTPETRDPTYLKIVQRLEERKQAPYSIHQVALMGACEGKEVGQWFGPNTVAQVLKKL 157
Query: 89 AKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRK 122
YD WSS+V HVALDNT+V + + C N +
Sbjct: 158 VVYDKWSSLVIHVALDNTVVKEDILQQCIVNNDR 191
>gi|241999098|ref|XP_002434192.1| cystein protease, putative [Ixodes scapularis]
gi|215495951|gb|EEC05592.1| cystein protease, putative [Ixodes scapularis]
Length = 382
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 69/89 (77%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR+W+W +K + YL IL+MF+D++ +SIHQIA G SEGK VGEWFGPNTVA VLR
Sbjct: 89 GREWRWEPGTKNKDYLYILRMFQDKKNCTFSIHQIAQMGVSEGKTVGEWFGPNTVAHVLR 148
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKL 115
KLA +D WSS+ HVA+DNT+++N++ K
Sbjct: 149 KLAIFDKWSSLAIHVAMDNTVIINEISKF 177
>gi|158296556|ref|XP_316946.4| AGAP008497-PA [Anopheles gambiae str. PEST]
gi|157014766|gb|EAA12240.4| AGAP008497-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQVL 85
GRDW W ++++ YL I+ FED + AP+S+HQIAL G +SE K +GEWFGPNTVAQVL
Sbjct: 95 GRDWVWEAETRDDIYLNIVNRFEDSKQAPFSLHQIALMGDSSEEKRIGEWFGPNTVAQVL 154
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLA 124
+KL K+DDW +V HVALDNT+ +++ +LC K A
Sbjct: 155 KKLVKFDDWCRLVIHVALDNTVATDEIVELCVDKKEPEA 193
>gi|443684303|gb|ELT88258.1| hypothetical protein CAPTEDRAFT_225251 [Capitella teleta]
Length = 410
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 75/96 (78%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W + + Y +IL+MF+D+R+A YS+ IA G SEGKA+GEWFGPNT++QVLR
Sbjct: 101 GRDWRWTKDKYDPKYFEILRMFQDKRSAKYSLQVIASMGTSEGKAIGEWFGPNTISQVLR 160
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRK 122
KL D+WS++V HVALDNT++++ V LC ++K++
Sbjct: 161 KLCVSDEWSNLVVHVALDNTVIIDDVFCLCKSSKKE 196
>gi|391335597|ref|XP_003742176.1| PREDICTED: cysteine protease ATG4B-like [Metaseiulus occidentalis]
Length = 393
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 71/93 (76%), Gaps = 3/93 (3%)
Query: 27 GRDWQWNVNSK---EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
GR W W + + E YL+IL+MF+D+++A +SIHQI+L G SEGKAVGEWFGPNTVAQ
Sbjct: 128 GRSWMWTSDDRLPDRENYLRILRMFQDKKSATFSIHQISLMGLSEGKAVGEWFGPNTVAQ 187
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
L+KL +YD WS + HVA+DN ++++ +K LC
Sbjct: 188 ALKKLVQYDHWSEMKLHVAMDNIIILSDIKSLC 220
>gi|410036442|ref|XP_003950065.1| PREDICTED: cysteine protease ATG4B [Pan troglodytes]
Length = 521
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 209 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 268
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 269 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 302
>gi|332815902|ref|XP_001162556.2| PREDICTED: cysteine protease ATG4B isoform 1 [Pan troglodytes]
Length = 496
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 209 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 268
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 269 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 302
>gi|332266032|ref|XP_003282019.1| PREDICTED: cysteine protease ATG4B [Nomascus leucogenys]
Length = 518
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 216 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 275
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 276 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 309
>gi|402889930|ref|XP_003908250.1| PREDICTED: cysteine protease ATG4B [Papio anubis]
Length = 508
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 208 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 267
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 268 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 301
>gi|410036440|ref|XP_003309622.2| PREDICTED: cysteine protease ATG4B isoform 5 [Pan troglodytes]
Length = 509
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 209 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 268
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 269 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 302
>gi|397483831|ref|XP_003813094.1| PREDICTED: cysteine protease ATG4B isoform 1 [Pan paniscus]
Length = 481
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 181 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 240
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 241 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 274
>gi|194381088|dbj|BAG64112.1| unnamed protein product [Homo sapiens]
Length = 510
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 210 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 269
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 270 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 303
>gi|118404310|ref|NP_001072464.1| autophagy related 4B, cysteine peptidase [Xenopus (Silurana)
tropicalis]
gi|115291929|gb|AAI21871.1| cysteine endopeptidase AUT-like (1O128) [Xenopus (Silurana)
tropicalis]
Length = 384
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W+ + YL IL F D++ + YSIHQIA G EGK +G+W+GPNTVAQVLR
Sbjct: 93 GRDWRWDKQKSQGEYLNILTAFLDKKDSYYSIHQIAQMGVGEGKCIGQWYGPNTVAQVLR 152
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KLA +D WSSI H+A+DNT+V++++++LC
Sbjct: 153 KLAVFDQWSSIAVHIAMDNTVVMDEIRRLC 182
>gi|148233205|ref|NP_001088025.1| cysteine protease ATG4B [Xenopus laevis]
gi|61211762|sp|Q640G7.1|ATG4B_XENLA RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B
gi|52221191|gb|AAH82660.1| LOC494717 protein [Xenopus laevis]
Length = 384
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 69/90 (76%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W+ + YL IL F D++ + YSIHQIA G EGK +G+W+GPNTVAQVLR
Sbjct: 93 GRDWRWDKQKPKGEYLNILTAFLDKKDSYYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLR 152
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KLA +D WSSI H+A+DNT+VV+++++LC
Sbjct: 153 KLAVFDQWSSIAVHIAMDNTVVVDEIRRLC 182
>gi|195401363|ref|XP_002059283.1| GJ16311 [Drosophila virilis]
gi|194156157|gb|EDW71341.1| GJ16311 [Drosophila virilis]
Length = 397
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 70/90 (77%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIALTG S+ KAVGEW GPNTVAQ+L+
Sbjct: 111 GRDWFWTPDCRDATYLKIVNRFEDTRKSFYSIHQIALTGESQNKAVGEWLGPNTVAQILK 170
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
L ++DDWSS+V HVA+D+T+V++++ C
Sbjct: 171 ILVRFDDWSSLVVHVAMDSTVVLDEIYTRC 200
>gi|354474222|ref|XP_003499330.1| PREDICTED: cysteine protease ATG4B-like [Cricetulus griseus]
Length = 479
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 47/91 (51%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 179 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 238
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 239 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLC 269
>gi|324506823|gb|ADY42901.1| Cysteine protease ATG4B [Ascaris suum]
Length = 433
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 68/92 (73%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G +W W+ ++KEE Y +IL+MF+D++ P+S+HQIA G SE K +GEWFGPNT AQVL+
Sbjct: 94 GTEWMWDRDNKEEDYKRILRMFQDKKCCPFSLHQIAQMGVSERKQIGEWFGPNTAAQVLK 153
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL YDDWS + HVALDN L+ + V+ + T
Sbjct: 154 KLVVYDDWSRLAVHVALDNLLIASDVRTMAHT 185
>gi|321472665|gb|EFX83634.1| hypothetical protein DAPPUDRAFT_194862 [Daphnia pulex]
Length = 389
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 73/93 (78%), Gaps = 3/93 (3%)
Query: 27 GRDWQWNVNSKE---EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
GR W V + E+Y KILK+FED++TA YSIHQ+A G SEGK +G+WFGPNTVAQ
Sbjct: 120 GRQPFWPVGDDQRTTESYKKILKLFEDKKTAVYSIHQLAQMGVSEGKEIGQWFGPNTVAQ 179
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
VL+KL++YD+WS++ HVA+DN +V+ ++++LC
Sbjct: 180 VLKKLSEYDEWSALKIHVAMDNAVVIEEIEQLC 212
>gi|449498615|ref|XP_002197397.2| PREDICTED: cysteine protease ATG4A [Taeniopygia guttata]
Length = 412
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + K+ E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWQWEKHKKQPEEYHRILRCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|156395764|ref|XP_001637280.1| predicted protein [Nematostella vectensis]
gi|156224391|gb|EDO45217.1| predicted protein [Nematostella vectensis]
Length = 368
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 84/136 (61%), Gaps = 20/136 (14%)
Query: 27 GRDWQWNV-NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW+ N+ Y++IL+ F D++ + YSIHQIA G SEGKAVG WFGPNTVAQVL
Sbjct: 98 GRDWQWDPENNTTPEYMQILEAFLDKKDSLYSIHQIAQMGVSEGKAVGSWFGPNTVAQVL 157
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL-----DN 140
+KL+ +DDWSS+ HVA+DNT+++ + +W +V + L +
Sbjct: 158 KKLSAFDDWSSLCLHVAMDNTVIIEDIS--------------NWRPLVLFIPLRLGLTEM 203
Query: 141 TLVVNQVKKLCTTNKR 156
+V N+ K C T K+
Sbjct: 204 NVVYNEPLKACFTFKQ 219
>gi|195159572|ref|XP_002020652.1| GL15485 [Drosophila persimilis]
gi|194117602|gb|EDW39645.1| GL15485 [Drosophila persimilis]
Length = 409
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W ++ YLKI+ FED R + YSIHQIAL G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPECQDATYLKIVNRFEDVRKSYYSIHQIALMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +DDW S+V HVA+D+T+V++ V LC
Sbjct: 177 KLVLFDDWCSLVVHVAMDSTVVLDDVYSLC 206
>gi|125986465|ref|XP_001356996.1| GA18177 [Drosophila pseudoobscura pseudoobscura]
gi|54645322|gb|EAL34062.1| GA18177 [Drosophila pseudoobscura pseudoobscura]
Length = 409
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W ++ YLKI+ FED R + YSIHQIAL G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPECQDATYLKIVNRFEDVRKSYYSIHQIALMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL +DDW S+V HVA+D+T+V++ V LC
Sbjct: 177 KLVLFDDWCSLVVHVAMDSTVVLDDVYSLC 206
>gi|194759168|ref|XP_001961821.1| GF15159 [Drosophila ananassae]
gi|190615518|gb|EDV31042.1| GF15159 [Drosophila ananassae]
Length = 402
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W ++ YLKI+ FED + + YSIHQIAL G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPECRDATYLKIVNRFEDVKNSCYSIHQIALMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
KL ++DDW S+ HVA+D+T+V++ + LC D W ++ + L
Sbjct: 177 KLVRFDDWCSLAVHVAMDSTVVLDDIYSLCREG-------DSWKPLLLVIPL 221
>gi|431822415|ref|NP_001258915.1| cysteine protease ATG4A isoform 1 [Gallus gallus]
Length = 397
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + K+ E Y +IL F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C +
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRS 188
>gi|431822417|ref|NP_001258916.1| cysteine protease ATG4A isoform 2 [Gallus gallus]
gi|61211756|sp|Q5ZIW7.1|ATG4A_CHICK RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|53134379|emb|CAG32326.1| hypothetical protein RCJMB04_23b20 [Gallus gallus]
Length = 380
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + K+ E Y +IL F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 79 GRDWQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C +
Sbjct: 139 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRS 171
>gi|291415044|ref|XP_002723769.1| PREDICTED: APG4 autophagy 4 homolog B [Oryctolagus cuniculus]
Length = 473
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++YL +L F DR+ + YSIHQIA G EGK+VG+W+GPNTVAQVL
Sbjct: 174 GRDWRWTQQKRQPDSYLSVLHAFMDRKDSYYSIHQIAQMGVGEGKSVGQWYGPNTVAQVL 233
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC ++
Sbjct: 234 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRSS 267
>gi|326924562|ref|XP_003208495.1| PREDICTED: cysteine protease ATG4A-like, partial [Meleagris
gallopavo]
Length = 421
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + ++ E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 120 GRDWQWEKHKEQPEEYHRILRCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 179
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 180 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 210
>gi|194853882|ref|XP_001968241.1| GG24763 [Drosophila erecta]
gi|190660108|gb|EDV57300.1| GG24763 [Drosophila erecta]
Length = 411
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIA G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTADCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL ++DDWSS+ HVA+D+T+V++ V C
Sbjct: 177 KLVRFDDWSSLAIHVAMDSTVVLDDVYSSC 206
>gi|327277326|ref|XP_003223416.1| PREDICTED: cysteine protease ATG4A-like [Anolis carolinensis]
Length = 385
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W + K+ E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 83 GRDWHWEEHKKQPEEYHRILRCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 142
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 143 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 173
>gi|449273759|gb|EMC83168.1| Cysteine protease ATG4A, partial [Columba livia]
Length = 395
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + ++ E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 94 GRDWQWEKHKEQPEEYHRILRCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 154 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 184
>gi|296206033|ref|XP_002750034.1| PREDICTED: cysteine protease ATG4B isoform 2 [Callithrix jacchus]
Length = 319
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>gi|61211813|sp|Q8BGE6.2|ATG4B_MOUSE RecName: Full=Cysteine protease ATG4B; AltName: Full=AUT-like 1
cysteine endopeptidase; AltName: Full=Autophagin-1;
AltName: Full=Autophagy-related cysteine endopeptidase
1; AltName: Full=Autophagy-related protein 4 homolog B
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 186
>gi|20071131|gb|AAH27184.1| Autophagy-related 4B (yeast) [Mus musculus]
gi|26353914|dbj|BAC40587.1| unnamed protein product [Mus musculus]
gi|74188242|dbj|BAE25791.1| unnamed protein product [Mus musculus]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 186
>gi|426339167|ref|XP_004033531.1| PREDICTED: cysteine protease ATG4B isoform 1 [Gorilla gorilla
gorilla]
gi|426339169|ref|XP_004033532.1| PREDICTED: cysteine protease ATG4B isoform 2 [Gorilla gorilla
gorilla]
gi|221045722|dbj|BAH14538.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>gi|14042153|dbj|BAB55127.1| unnamed protein product [Homo sapiens]
Length = 331
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>gi|148707985|gb|EDL39932.1| autophagy-related 4B (yeast), isoform CRA_a [Mus musculus]
Length = 390
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 90 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 149
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 150 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 183
>gi|27883848|ref|NP_777363.1| cysteine protease ATG4B [Mus musculus]
gi|26324650|dbj|BAC26079.1| unnamed protein product [Mus musculus]
gi|26327423|dbj|BAC27455.1| unnamed protein product [Mus musculus]
gi|26344632|dbj|BAC35965.1| unnamed protein product [Mus musculus]
gi|27763983|emb|CAD43220.1| autophagin-1 [Mus musculus]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 186
>gi|395851538|ref|XP_003798310.1| PREDICTED: cysteine protease ATG4B [Otolemur garnettii]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|119591685|gb|EAW71279.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 331
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>gi|343961553|dbj|BAK62366.1| cysteine protease ATG4B [Pan troglodytes]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|397483833|ref|XP_003813095.1| PREDICTED: cysteine protease ATG4B isoform 2 [Pan paniscus]
Length = 468
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 181 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 240
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 241 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 274
>gi|410206608|gb|JAA00523.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
gi|410247746|gb|JAA11840.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
gi|410295834|gb|JAA26517.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
gi|410352839|gb|JAA43023.1| ATG4 autophagy related 4 homolog B [Pan troglodytes]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|355565356|gb|EHH21845.1| hypothetical protein EGK_04999, partial [Macaca mulatta]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|5262636|emb|CAB45756.1| hypothetical protein [Homo sapiens]
gi|12653857|gb|AAH00719.1| ATG4 autophagy related 4 homolog B (S. cerevisiae) [Homo sapiens]
gi|27763981|emb|CAD43219.1| autophagin-1 [Homo sapiens]
gi|117646318|emb|CAL38626.1| hypothetical protein [synthetic construct]
gi|119591687|gb|EAW71281.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_d
[Homo sapiens]
gi|123981932|gb|ABM82795.1| ATG4 autophagy related 4 homolog B (S. cerevisiae) [synthetic
construct]
gi|168273130|dbj|BAG10404.1| ATG4 autophagy related 4 homolog B [synthetic construct]
Length = 393
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|119591684|gb|EAW71278.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 415
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|90077212|dbj|BAE88286.1| unnamed protein product [Macaca fascicularis]
Length = 393
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|47132611|ref|NP_037457.3| cysteine protease ATG4B isoform a [Homo sapiens]
gi|296434400|sp|Q9Y4P1.2|ATG4B_HUMAN RecName: Full=Cysteine protease ATG4B; AltName: Full=AUT-like 1
cysteine endopeptidase; AltName: Full=Autophagin-1;
AltName: Full=Autophagy-related cysteine endopeptidase
1; AltName: Full=Autophagy-related protein 4 homolog B;
Short=hAPG4B
gi|62822370|gb|AAY14919.1| unknown [Homo sapiens]
Length = 393
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|71891691|dbj|BAA76787.2| KIAA0943 protein [Homo sapiens]
Length = 396
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 96 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 156 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 189
>gi|380808290|gb|AFE76020.1| cysteine protease ATG4B isoform a [Macaca mulatta]
gi|383416899|gb|AFH31663.1| cysteine protease ATG4B isoform a [Macaca mulatta]
gi|384941198|gb|AFI34204.1| cysteine protease ATG4B isoform a [Macaca mulatta]
Length = 393
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|119591686|gb|EAW71280.1| ATG4 autophagy related 4 homolog B (S. cerevisiae), isoform CRA_c
[Homo sapiens]
Length = 354
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|397483835|ref|XP_003813096.1| PREDICTED: cysteine protease ATG4B isoform 3 [Pan paniscus]
Length = 405
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|30410798|ref|NP_847896.1| cysteine protease ATG4B isoform b [Homo sapiens]
Length = 380
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|14042685|dbj|BAB55353.1| unnamed protein product [Homo sapiens]
Length = 380
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|78101773|pdb|2CY7|A Chain A, The Crystal Structure Of Human Atg4b
Length = 396
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 96 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 156 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 189
>gi|34531319|dbj|BAC86110.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 181 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 240
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 241 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 274
>gi|88192732|pdb|2D1I|A Chain A, Structure Of Human Atg4b
gi|88192733|pdb|2D1I|B Chain B, Structure Of Human Atg4b
Length = 398
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 98 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 157
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 158 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 191
>gi|195118032|ref|XP_002003544.1| GI17971 [Drosophila mojavensis]
gi|193914119|gb|EDW12986.1| GI17971 [Drosophila mojavensis]
Length = 382
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 5/112 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIAL G S+ KAVGEW GPNTVAQ+L+
Sbjct: 111 GRDWFWTPDCRDATYLKIVNRFEDTRKSYYSIHQIALMGESQNKAVGEWLGPNTVAQILK 170
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
L ++DDWSS+ HVA+D+T+V++ + C + W ++ V L
Sbjct: 171 ILVRFDDWSSLAVHVAMDSTVVLDDIYTCCQESSES-----SWKPLLLIVPL 217
>gi|14041938|dbj|BAB55042.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>gi|297265289|ref|XP_002799164.1| PREDICTED: cysteine protease ATG4B-like [Macaca mulatta]
Length = 358
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 69 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 128
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 129 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 162
>gi|327267215|ref|XP_003218398.1| PREDICTED: cysteine protease ATG4B-like [Anolis carolinensis]
Length = 393
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ K+ ++Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWSKGKKQTDSYYNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
RKLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 152 RKLASFDTWSSLAVHIAMDNTVVMEEIRRLC 182
>gi|195575679|ref|XP_002077704.1| GD23066 [Drosophila simulans]
gi|194189713|gb|EDX03289.1| GD23066 [Drosophila simulans]
Length = 411
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIA G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL ++DDWSS+ HVA+D+T+V++ V C
Sbjct: 177 KLVRFDDWSSLAIHVAMDSTVVLDDVYASC 206
>gi|442625102|ref|NP_001259852.1| Autophagy-specific gene 4, isoform B [Drosophila melanogaster]
gi|440213106|gb|AGB92389.1| Autophagy-specific gene 4, isoform B [Drosophila melanogaster]
Length = 410
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIA G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL ++DDWSS+ HVA+D+T+V++ V C
Sbjct: 177 KLVRFDDWSSLAIHVAMDSTVVLDDVYASC 206
>gi|426339171|ref|XP_004033533.1| PREDICTED: cysteine protease ATG4B isoform 3 [Gorilla gorilla
gorilla]
Length = 379
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 79 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 139 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 172
>gi|355750993|gb|EHH55320.1| hypothetical protein EGM_04504, partial [Macaca fascicularis]
Length = 268
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>gi|194389756|dbj|BAG60394.1| unnamed protein product [Homo sapiens]
Length = 379
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 79 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 139 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 172
>gi|403291503|ref|XP_003936827.1| PREDICTED: cysteine protease ATG4B [Saimiri boliviensis
boliviensis]
Length = 319
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWAQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>gi|224510547|pdb|2ZZP|A Chain A, The Crystal Structure Of Human Atg4b(C74s)- Lc3(1-124)
Complex
Length = 357
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 96 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 156 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 189
>gi|19920488|ref|NP_608563.1| Autophagy-specific gene 4, isoform A [Drosophila melanogaster]
gi|7296129|gb|AAF51423.1| Autophagy-specific gene 4, isoform A [Drosophila melanogaster]
gi|16198037|gb|AAL13802.1| LD26292p [Drosophila melanogaster]
gi|220945806|gb|ACL85446.1| Atg4-PA [synthetic construct]
gi|220955642|gb|ACL90364.1| Atg4-PA [synthetic construct]
Length = 411
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIA G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL ++DDWSS+ HVA+D+T+V++ V C
Sbjct: 177 KLVRFDDWSSLAIHVAMDSTVVLDDVYASC 206
>gi|149244060|pdb|2Z0D|A Chain A, The Crystal Structure Of Human Atg4b- Lc3(1-120) Complex
gi|149244062|pdb|2Z0E|A Chain A, The Crystal Structure Of Human Atg4b- Lc3(1-124) Complex
Length = 357
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 96 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 156 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 189
>gi|397483837|ref|XP_003813097.1| PREDICTED: cysteine protease ATG4B isoform 4 [Pan paniscus]
Length = 379
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 79 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 139 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 172
>gi|195051960|ref|XP_001993206.1| GH13687 [Drosophila grimshawi]
gi|193900265|gb|EDV99131.1| GH13687 [Drosophila grimshawi]
Length = 393
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIAL G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPDCRDTTYLKIVNRFEDTRKSFYSIHQIALMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
L ++DDWSS+ HVA+D+T+V++ + LC
Sbjct: 177 ILVRFDDWSSLNVHVAMDSTVVLDDIFTLC 206
>gi|348577273|ref|XP_003474409.1| PREDICTED: cysteine protease ATG4B [Cavia porcellus]
Length = 412
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 110 GRDWRWAQRKRQPDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 169
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T
Sbjct: 170 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTG 203
>gi|345329187|ref|XP_003431344.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4A-like
[Ornithorhynchus anatinus]
Length = 436
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W + K+ E Y KIL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 135 GRDWCWEKHKKQPEEYHKILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 194
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 195 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 225
>gi|334350077|ref|XP_001376474.2| PREDICTED: cysteine protease ATG4A-like [Monodelphis domestica]
Length = 417
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W + ++ E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 118 GRDWCWEMQQEQPEEYHRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 177
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KKLC
Sbjct: 178 KKLALFDEWNSLAVYVSMDNTVVIEDIKKLC 208
>gi|449266947|gb|EMC77925.1| Cysteine protease ATG4B, partial [Columba livia]
Length = 393
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQVDNYFSVLNAFVDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
>gi|195470405|ref|XP_002087497.1| GE17286 [Drosophila yakuba]
gi|194173598|gb|EDW87209.1| GE17286 [Drosophila yakuba]
Length = 411
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIA G ++ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTSDCRDATYLKIVNRFEDVRNSYYSIHQIAQMGETQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL ++DDWSS+ HVA+D+T+V++ V C
Sbjct: 177 KLVRFDDWSSLAIHVAMDSTVVLDDVYSSC 206
>gi|351713264|gb|EHB16183.1| Cysteine protease ATG4B [Heterocephalus glaber]
Length = 475
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 171 GRDWRWAQRKRQPDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 230
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ HVA+DNT+V+ ++++LC ++
Sbjct: 231 KKLAVFDTWSSLAVHVAMDNTVVMEEIRRLCRSS 264
>gi|345307034|ref|XP_001513122.2| PREDICTED: cysteine protease ATG4B-like [Ornithorhynchus anatinus]
Length = 461
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 162 GRDWRWKKGRRQTDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 221
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 222 KKLAAFDTWSSLAVHIAMDNTVVIEEIRRLCKPN 255
>gi|66773074|ref|NP_001019605.1| cysteine protease ATG4A [Danio rerio]
gi|66267494|gb|AAH95617.1| Zgc:111958 [Danio rerio]
Length = 375
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 24 SFSGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVA 82
S GRDW+W+ + + Y +IL F D++ + YSIHQ+A G EGK+VGEW+GPNTVA
Sbjct: 90 SHLGRDWRWDPEKHQPKEYQRILDCFLDKKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVA 149
Query: 83 QVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD--DWSSIVFHVAL 138
QVL+KLA +DDW+S+ +V++DNT+V+ +KKLC +L DW ++ + L
Sbjct: 150 QVLKKLALFDDWNSLSVYVSMDNTVVIEDIKKLCVRADLQLQSQQPLDWRPLLLVIPL 207
>gi|149037474|gb|EDL91905.1| autophagy-related 4B (yeast), isoform CRA_b [Rattus norvegicus]
Length = 319
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++ KLC +
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEISKLCRAS 112
>gi|344299096|ref|XP_003421224.1| PREDICTED: cysteine protease ATG4B [Loxodonta africana]
Length = 420
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 120 GRDWRWAQRRRQPDSYFSVLHAFIDRKDSHYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 179
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC ++
Sbjct: 180 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCKSS 213
>gi|395733089|ref|XP_002813143.2| PREDICTED: cysteine protease ATG4B isoform 2 [Pongo abelii]
Length = 331
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLC 109
>gi|344239232|gb|EGV95335.1| Cysteine protease ATG4B [Cricetulus griseus]
Length = 394
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 94 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 154 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLC 184
>gi|194384462|dbj|BAG59391.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+D+T+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDSTVVMEEIRRLCRTS 112
>gi|213513159|ref|NP_001133247.1| cysteine protease ATG4B [Salmo salar]
gi|209147572|gb|ACI32896.1| Cysteine protease ATG4B [Salmo salar]
gi|223647372|gb|ACN10444.1| Cysteine protease ATG4B [Salmo salar]
Length = 397
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W S+ E Y+ IL F D++ YS+HQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWVRSQSQREDYISILNAFLDKKDGYYSLHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDSWSRLTVHVAMDNTVVIEEIKRLC 183
>gi|410920724|ref|XP_003973833.1| PREDICTED: cysteine protease ATG4B-like [Takifugu rubripes]
Length = 394
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W K+ + Y+ IL F D++ + YSIHQIA G EGK +G+W+GPNTVAQVL
Sbjct: 93 GRDWRWVRGQKQRQEYISILNAFIDKKDSYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS +V HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDTWSRLVVHVAMDNTVVIEEIKRLC 183
>gi|348513452|ref|XP_003444256.1| PREDICTED: cysteine protease ATG4B-like [Oreochromis niloticus]
Length = 391
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W K+ + Y+ +L F D++ + YSIHQIA G EGK +G+W+GPNTVAQVL
Sbjct: 93 GRDWRWAKGQKQRDEYISLLNAFIDKKDSYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS +V HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDTWSKVVVHVAMDNTVVIEEIKRLC 183
>gi|297669945|ref|XP_002813144.1| PREDICTED: cysteine protease ATG4B isoform 3 [Pongo abelii]
Length = 378
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 78 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 137
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 138 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLC 168
>gi|440901286|gb|ELR52261.1| Cysteine protease ATG4B, partial [Bos grunniens mutus]
Length = 393
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK+VG+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSVGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>gi|213626921|gb|AAI70397.1| APG4A protein [Xenopus laevis]
Length = 395
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + + E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWQWEKHKEHPEEYRQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +K +C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKTMC 186
>gi|163914473|ref|NP_001106295.1| APG4A protein [Xenopus laevis]
gi|161611704|gb|AAI55873.1| APG4A protein [Xenopus laevis]
Length = 395
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + + E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWQWEKHKEHPEEYRQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +K +C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKTMC 186
>gi|50417810|gb|AAH78135.1| APG4A protein, partial [Xenopus laevis]
Length = 392
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + + E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 93 GRDWQWEKHKEHPEEYRQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +K +C
Sbjct: 153 KKLALFDEWNSLAVYVSMDNTVVIEDIKTMC 183
>gi|426257739|ref|XP_004022480.1| PREDICTED: cysteine protease ATG4A [Ovis aries]
Length = 398
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>gi|151554833|gb|AAI47963.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [Bos taurus]
Length = 398
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>gi|47564112|ref|NP_001001171.1| cysteine protease ATG4A [Bos taurus]
gi|61211781|sp|Q6PZ05.1|ATG4A_BOVIN RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related cysteine endopeptidase 2A;
Short=Autophagin-2A; AltName: Full=Autophagy-related
protein 4 homolog A; AltName: Full=bAut2A
gi|45861656|gb|AAS78581.1| Aut2a [Bos taurus]
Length = 398
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>gi|440891575|gb|ELR45180.1| Cysteine protease ATG4A, partial [Bos grunniens mutus]
Length = 408
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 94 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 154 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 186
>gi|296470926|tpg|DAA13041.1| TPA: cysteine protease ATG4A [Bos taurus]
Length = 396
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>gi|50369556|gb|AAH76463.1| Atg4b protein, partial [Danio rerio]
Length = 393
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ ++ Y+ IL F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 152 KKLAVFDSWSRLAVHVAMDNTVVIEEIKRLC 182
>gi|53132082|emb|CAG31871.1| hypothetical protein RCJMB04_12m14 [Gallus gallus]
Length = 343
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
>gi|61211768|sp|Q6DG88.2|ATG4B_DANRE RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B
Length = 394
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ ++ Y+ IL F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDSWSRLAVHVAMDNTVVIEEIKRLC 183
>gi|47087191|ref|NP_998738.1| cysteine protease ATG4B [Gallus gallus]
gi|61211779|sp|Q6PZ02.1|ATG4B_CHICK RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related cysteine endopeptidase 2B;
Short=Autophagin-2B; Short=cAut2B; AltName:
Full=Autophagy-related protein 4 homolog B
gi|45861662|gb|AAS78584.1| AUT2B [Gallus gallus]
Length = 393
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
>gi|148237097|ref|NP_001082821.1| cysteine protease ATG4B [Danio rerio]
gi|141795460|gb|AAI34887.1| Atg4b protein [Danio rerio]
Length = 394
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ ++ Y+ IL F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDSWSRLAVHVAMDNTVVIEEIKRLC 183
>gi|326925776|ref|XP_003209085.1| PREDICTED: cysteine protease ATG4B-like [Meleagris gallopavo]
Length = 393
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQTDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
>gi|45861658|gb|AAS78582.1| Aut2B1 [Bos taurus]
Length = 342
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>gi|47564102|ref|NP_001001170.1| cysteine protease ATG4B [Bos taurus]
gi|61211780|sp|Q6PZ03.1|ATG4B_BOVIN RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related cysteine endopeptidase 2B;
Short=Autophagin-2B; AltName: Full=Autophagy-related
protein 4 homolog B; AltName: Full=bAut2B
gi|45861660|gb|AAS78583.1| Aut2b2 [Bos taurus]
Length = 393
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>gi|296488734|tpg|DAA30847.1| TPA: cysteine protease ATG4B [Bos taurus]
Length = 390
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>gi|417410350|gb|JAA51650.1| Putative cysteine protease required for autophagy, partial
[Desmodus rotundus]
Length = 394
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 94 GRDWRWTQRKRQPDSYFHVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 154 KKLAVFDTWSALAVHVAMDNTVVMEDIRRLCRSS 187
>gi|301775535|ref|XP_002923195.1| PREDICTED: cysteine protease ATG4B-like [Ailuropoda melanoleuca]
Length = 405
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 105 GRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 164
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ H+A+DNT+V+ +++LC+ +
Sbjct: 165 KKLAVFDTWSALAVHIAMDNTVVMEDIRRLCSGS 198
>gi|194374239|dbj|BAG57015.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 19 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 79 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 109
>gi|432853687|ref|XP_004067831.1| PREDICTED: cysteine protease ATG4B-like [Oryzias latipes]
Length = 390
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ E Y+ IL F D++ + YSIHQIA G EGK +G+W+GPNTVAQVL
Sbjct: 93 GRDWRWARGRRQREEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+++ ++K+LC
Sbjct: 153 KKLAVFDTWSRLAVHVAMDNTVIIEEIKRLC 183
>gi|410989159|ref|XP_004000832.1| PREDICTED: cysteine protease ATG4A isoform 2 [Felis catus]
Length = 336
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|332226094|ref|XP_003262224.1| PREDICTED: cysteine protease ATG4A isoform 2 [Nomascus leucogenys]
Length = 336
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|395854620|ref|XP_003799780.1| PREDICTED: cysteine protease ATG4A isoform 2 [Otolemur garnettii]
Length = 336
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|348563665|ref|XP_003467627.1| PREDICTED: cysteine protease ATG4A-like [Cavia porcellus]
Length = 398
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|281340990|gb|EFB16574.1| hypothetical protein PANDA_012287 [Ailuropoda melanoleuca]
Length = 369
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 90 GRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 149
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ H+A+DNT+V+ +++LC+ +
Sbjct: 150 KKLAVFDTWSALAVHIAMDNTVVMEDIRRLCSGS 183
>gi|345807894|ref|XP_538136.3| PREDICTED: cysteine protease ATG4A [Canis lupus familiaris]
Length = 398
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPREYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAIYVSMDNTVVIEDIKKMC 186
>gi|432107261|gb|ELK32675.1| Cysteine protease ATG4B [Myotis davidii]
Length = 394
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 94 GRDWRWTQRKRQPDSYFHVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ H+A+DNT+V+ +++LC ++
Sbjct: 154 KKLAIFDTWSALAVHIAMDNTVVMEDIRRLCRSS 187
>gi|149711769|ref|XP_001497815.1| PREDICTED: cysteine protease ATG4B [Equus caballus]
Length = 393
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ H+A+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHIAMDNTVVMEDIRRLCRSS 186
>gi|30795248|ref|NP_840054.1| cysteine protease ATG4A isoform b [Homo sapiens]
gi|426397038|ref|XP_004064735.1| PREDICTED: cysteine protease ATG4A isoform 2 [Gorilla gorilla
gorilla]
gi|15487242|emb|CAC69077.1| putative autophagy-related cysteine endopeptidase 2 [Homo sapiens]
gi|119623095|gb|EAX02690.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 336
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|119623101|gb|EAX02696.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_g
[Homo sapiens]
Length = 340
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 100 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 159
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 160 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 190
>gi|397497902|ref|XP_003819742.1| PREDICTED: cysteine protease ATG4A isoform 2 [Pan paniscus]
Length = 336
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|403289553|ref|XP_003935916.1| PREDICTED: cysteine protease ATG4A isoform 2 [Saimiri boliviensis
boliviensis]
Length = 360
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 120 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 179
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 180 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 210
>gi|30109219|gb|AAH41862.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [Homo sapiens]
gi|119623096|gb|EAX02691.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_c
[Homo sapiens]
gi|119623098|gb|EAX02693.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_c
[Homo sapiens]
Length = 321
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 19 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 79 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 109
>gi|126338580|ref|XP_001366892.1| PREDICTED: cysteine protease ATG4B-like [Monodelphis domestica]
Length = 396
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 96 GRDWRWKQGRRQTDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ +++LC N
Sbjct: 156 KKLAVFDTWSSLAVHIAMDNTVVMEDIRRLCKAN 189
>gi|402911089|ref|XP_003918175.1| PREDICTED: cysteine protease ATG4A isoform 2 [Papio anubis]
Length = 336
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|296236154|ref|XP_002763201.1| PREDICTED: uncharacterized protein LOC100409486 [Callithrix
jacchus]
Length = 360
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 120 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 179
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 180 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 210
>gi|410969807|ref|XP_003991383.1| PREDICTED: cysteine protease ATG4B [Felis catus]
Length = 445
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 145 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 204
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS++ HVA+DNT+V+ +++LC
Sbjct: 205 KKLAVFDTWSALAVHVAMDNTVVMEDIRRLC 235
>gi|410989157|ref|XP_004000831.1| PREDICTED: cysteine protease ATG4A isoform 1 [Felis catus]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|395854618|ref|XP_003799779.1| PREDICTED: cysteine protease ATG4A isoform 1 [Otolemur garnettii]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|30795252|ref|NP_443168.2| cysteine protease ATG4A isoform a [Homo sapiens]
gi|426397036|ref|XP_004064734.1| PREDICTED: cysteine protease ATG4A isoform 1 [Gorilla gorilla
gorilla]
gi|61211859|sp|Q8WYN0.1|ATG4A_HUMAN RecName: Full=Cysteine protease ATG4A; AltName: Full=AUT-like 2
cysteine endopeptidase; AltName: Full=Autophagin-2;
AltName: Full=Autophagy-related cysteine endopeptidase
2; AltName: Full=Autophagy-related protein 4 homolog A;
Short=hAPG4A
gi|18181956|dbj|BAB83889.1| Apg4A [Homo sapiens]
gi|27763979|emb|CAD43218.1| autophagin-2 [Homo sapiens]
gi|38197608|gb|AAH61696.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [Homo sapiens]
gi|119623094|gb|EAX02689.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|189069378|dbj|BAG37044.1| unnamed protein product [Homo sapiens]
gi|312151352|gb|ADQ32188.1| ATG4 autophagy related 4 homolog A (S. cerevisiae) [synthetic
construct]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|354500801|ref|XP_003512485.1| PREDICTED: cysteine protease ATG4A-like [Cricetulus griseus]
gi|344251116|gb|EGW07220.1| Cysteine protease ATG4A [Cricetulus griseus]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|119623100|gb|EAX02695.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_f
[Homo sapiens]
Length = 402
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 100 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 159
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 160 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 190
>gi|397497900|ref|XP_003819741.1| PREDICTED: cysteine protease ATG4A isoform 1 [Pan paniscus]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|344286328|ref|XP_003414911.1| PREDICTED: cysteine protease ATG4A [Loxodonta africana]
Length = 411
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 109 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 168
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 169 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 199
>gi|332226092|ref|XP_003262223.1| PREDICTED: cysteine protease ATG4A isoform 1 [Nomascus leucogenys]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|350537069|ref|NP_001233457.1| cysteine protease ATG4A [Pan troglodytes]
gi|343958112|dbj|BAK62911.1| cysteine protease ATG4A [Pan troglodytes]
gi|410207960|gb|JAA01199.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
gi|410248796|gb|JAA12365.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
gi|410290856|gb|JAA24028.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
gi|410329967|gb|JAA33930.1| ATG4 autophagy related 4 homolog A [Pan troglodytes]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|355757609|gb|EHH61134.1| Cysteine protease ATG4A, partial [Macaca fascicularis]
Length = 396
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 94 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 154 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 184
>gi|15487240|emb|CAC69076.1| putative autophagy-related cysteine endopeptidase 2 [Homo sapiens]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|417410362|gb|JAA51656.1| Putative cysteine protease required for autophagy, partial
[Desmodus rotundus]
Length = 396
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 94 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 154 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 184
>gi|197100863|ref|NP_001126588.1| cysteine protease ATG4A [Pongo abelii]
gi|61211744|sp|Q5R699.1|ATG4A_PONAB RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|55732020|emb|CAH92717.1| hypothetical protein [Pongo abelii]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|387762879|ref|NP_001248420.1| cysteine protease ATG4A [Macaca mulatta]
gi|380809390|gb|AFE76570.1| cysteine protease ATG4A isoform a [Macaca mulatta]
gi|383413573|gb|AFH30000.1| cysteine protease ATG4A isoform a [Macaca mulatta]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|355705060|gb|EHH30985.1| Cysteine protease ATG4A, partial [Macaca mulatta]
Length = 396
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 94 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 154 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 184
>gi|148228573|ref|NP_001085611.1| cysteine protease ATG4A [Xenopus laevis]
gi|61211771|sp|Q6GPU1.1|ATG4A_XENLA RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|49115669|gb|AAH73017.1| MGC82614 protein [Xenopus laevis]
Length = 397
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVN-SKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W + + E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 98 GRDWRWEKHKNHPEEYQQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 157
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+VV +K +C
Sbjct: 158 KKLALFDEWNSLAVYVSMDNTVVVEDIKTMC 188
>gi|402911087|ref|XP_003918174.1| PREDICTED: cysteine protease ATG4A isoform 1 [Papio anubis]
Length = 398
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|73994337|ref|XP_851977.1| PREDICTED: cysteine protease ATG4B [Canis lupus familiaris]
Length = 394
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 94 GRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS++ H+A+DNT+V+ +++LC
Sbjct: 154 KKLAVFDTWSALAVHIAMDNTVVMEDIRRLC 184
>gi|403289551|ref|XP_003935915.1| PREDICTED: cysteine protease ATG4A isoform 1 [Saimiri boliviensis
boliviensis]
Length = 422
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 120 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 179
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 180 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 210
>gi|355669955|gb|AER94692.1| ATG4 autophagy related 4-like protein B [Mustela putorius furo]
Length = 390
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 90 GRDWRWTQRKRQSDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 149
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS++ H+A+DNT+V+ +++LC
Sbjct: 150 KKLAVFDTWSALAVHIAMDNTVVMEDIRRLC 180
>gi|338729393|ref|XP_001490718.3| PREDICTED: cysteine protease ATG4A [Equus caballus]
Length = 398
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|62860068|ref|NP_001016619.1| autophagy related 4A, cysteine peptidase [Xenopus (Silurana)
tropicalis]
gi|89269917|emb|CAJ81691.1| APG4 autophagy 4 homolog A (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
gi|171846953|gb|AAI61565.1| ATG4 autophagy related 4 homolog A [Xenopus (Silurana) tropicalis]
gi|213625518|gb|AAI70776.1| ATG4 autophagy related 4 homolog A [Xenopus (Silurana) tropicalis]
gi|213627145|gb|AAI70802.1| ATG4 autophagy related 4 homolog A [Xenopus (Silurana) tropicalis]
Length = 395
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W + + E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 100 GRDWRWEKHKEHPEEYRQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 159
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +K +C
Sbjct: 160 KKLALFDEWNSLAVYVSMDNTVVIEDIKTMC 190
>gi|291407754|ref|XP_002720229.1| PREDICTED: autophagy-related cysteine endopeptidase 2 [Oryctolagus
cuniculus]
Length = 405
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 103 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 162
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 163 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 193
>gi|281342750|gb|EFB18334.1| hypothetical protein PANDA_015152 [Ailuropoda melanoleuca]
Length = 373
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 94 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 154 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 184
>gi|301780424|ref|XP_002925628.1| PREDICTED: cysteine protease ATG4A-like [Ailuropoda melanoleuca]
Length = 429
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 127 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 186
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 187 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 217
>gi|355669953|gb|AER94691.1| ATG4 autophagy related 4-like protein A [Mustela putorius furo]
Length = 408
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 106 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 165
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 166 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 196
>gi|146387686|pdb|2P82|A Chain A, Cysteine Protease Atg4a
gi|146387687|pdb|2P82|B Chain B, Cysteine Protease Atg4a
gi|146387688|pdb|2P82|C Chain C, Cysteine Protease Atg4a
gi|146387689|pdb|2P82|D Chain D, Cysteine Protease Atg4a
Length = 355
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 92 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 152 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 182
>gi|308490628|ref|XP_003107506.1| CRE-ATG-4.1 protein [Caenorhabditis remanei]
gi|308251874|gb|EFO95826.1| CRE-ATG-4.1 protein [Caenorhabditis remanei]
Length = 478
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 65/100 (65%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V EWFGPNT AQV++
Sbjct: 103 GRHFEWDIEKTSEVYDKILQMFFDEKDALYSIHQIAQMGVTEGKKVSEWFGPNTAAQVIK 162
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKY 126
KL +DDWS+I HVALDN LV + TT A Y
Sbjct: 163 KLTIFDDWSNIAVHVALDNILVKEDALTMATTYPSDNASY 202
>gi|298231123|ref|NP_001177212.1| cysteine protease ATG4B [Sus scrofa]
gi|296874484|gb|ADH81747.1| autophagy related 4-like protein B [Sus scrofa]
Length = 393
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNV-NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+W + ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRGWRWTQWERQPDSYFSVLHAFMDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ ++++LC ++
Sbjct: 153 KKLAAFDTWSALAVHVAMDNTVVMEEIRRLCRSS 186
>gi|256078123|ref|XP_002575347.1| autophagin-1 (C54 family) [Schistosoma mansoni]
gi|360045353|emb|CCD82901.1| autophagin-1 (C54 family) [Schistosoma mansoni]
Length = 556
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 71/94 (75%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W+W+ + Y ++L+MF+DRR+A YSI I LTG S GK++G WFGPNTVAQVL+
Sbjct: 90 GRSWKWSPEQESPEYYRLLQMFQDRRSALYSIQTITLTGVSLGKSIGSWFGPNTVAQVLK 149
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNK 120
KL+ YD W+++ H+++++ ++++++K LC ++
Sbjct: 150 KLSVYDRWTNLFIHISVEDGIIIDEIKSLCCQHR 183
>gi|224059752|ref|XP_002193231.1| PREDICTED: cysteine protease ATG4B [Taeniopygia guttata]
Length = 393
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQMDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC ++
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSH 185
>gi|395528686|ref|XP_003766458.1| PREDICTED: cysteine protease ATG4B [Sarcophilus harrisii]
Length = 393
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWKQGRRQTDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLC 183
>gi|195437827|ref|XP_002066841.1| GK24338 [Drosophila willistoni]
gi|194162926|gb|EDW77827.1| GK24338 [Drosophila willistoni]
Length = 400
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 65/89 (73%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR+W W ++ YLKI+ FED R + YS+HQIAL G S+ K VGEW GPNTVAQ+L+
Sbjct: 111 GREWYWTSECRDATYLKIVNRFEDARKSYYSLHQIALMGESQNKMVGEWLGPNTVAQILK 170
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKL 115
KL +DDW S+V HVA+D+T+V++ + L
Sbjct: 171 KLVCFDDWCSLVIHVAMDSTVVLDDIYSL 199
>gi|187282046|ref|NP_001119770.1| uncharacterized protein LOC678769 [Rattus norvegicus]
gi|169642267|gb|AAI60890.1| LOC678769 protein [Rattus norvegicus]
Length = 406
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|74136555|ref|NP_777364.3| cysteine protease ATG4A [Mus musculus]
gi|61211821|sp|Q8C9S8.2|ATG4A_MOUSE RecName: Full=Cysteine protease ATG4A; AltName: Full=AUT-like 2
cysteine endopeptidase; AltName: Full=Autophagin-2;
AltName: Full=Autophagy-related cysteine endopeptidase
2; AltName: Full=Autophagy-related protein 4 homolog A
gi|59809037|gb|AAH89500.1| Atg4a protein [Mus musculus]
gi|74193939|dbj|BAE36898.1| unnamed protein product [Mus musculus]
Length = 396
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|149022064|gb|EDL78958.1| rCG26842 [Rattus norvegicus]
Length = 246
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|312073335|ref|XP_003139474.1| hypothetical protein LOAG_03889 [Loa loa]
gi|307765357|gb|EFO24591.1| hypothetical protein LOAG_03889 [Loa loa]
Length = 458
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR+W W+ + K Y +IL+MF+D++ + +SIHQIA G SEGK +GEWFGPNT AQVL+
Sbjct: 123 GRNWLWDRDIKLAEYKRILRMFQDKKNSLFSIHQIAHMGVSEGKNIGEWFGPNTTAQVLK 182
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL YD WS + HVALDN L+ + ++ + T
Sbjct: 183 KLVIYDQWSRLAVHVALDNVLITSDIRTMAFT 214
>gi|148691993|gb|EDL23940.1| mCG3720 [Mus musculus]
Length = 318
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 144 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 203
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 204 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCCV 236
>gi|449666316|ref|XP_002168183.2| PREDICTED: cysteine protease ATG4B-like [Hydra magnipapillata]
Length = 436
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W K+ E Y+ IL F D++ + YSIHQIA G EGK +G+WFGPNTVAQV+
Sbjct: 98 GRDWDWRSGRKDNEIYMMILHSFLDKKDSLYSIHQIAQMGVGEGKQIGQWFGPNTVAQVI 157
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSI 132
+KL +DD + + HVA+DNT+V+ +KKLC ++ Y + S I
Sbjct: 158 KKLVLFDDNADMAVHVAMDNTVVIEDIKKLCKSSINAWGCYGECSYI 204
>gi|395545675|ref|XP_003774724.1| PREDICTED: cysteine protease ATG4A [Sarcophilus harrisii]
Length = 431
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 29 DWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
DW W + ++ E Y +ILK F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+K
Sbjct: 134 DWGWEKHQEQPEEYQRILKCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKK 193
Query: 88 LAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
LA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 194 LALFDEWNSLAVYVSMDNTVVIEDIKKMC 222
>gi|268570274|ref|XP_002640735.1| Hypothetical protein CBG19805 [Caenorhabditis briggsae]
Length = 481
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ + Y KIL+MF D + A YSIHQIA G SEGK V EWFGPNT AQV++
Sbjct: 99 GRHFEWDIEKTSDVYEKILQMFFDEKDALYSIHQIAQMGVSEGKEVSEWFGPNTAAQVIK 158
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS+I HVALDN LV + TT
Sbjct: 159 KLTIFDDWSNIAVHVALDNILVKQDALTMATT 190
>gi|350595874|ref|XP_003484197.1| PREDICTED: cysteine protease ATG4A [Sus scrofa]
Length = 393
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 25 FSGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
FS DW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQ
Sbjct: 89 FSPIDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQ 148
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
VL+KLA +D+W+S+ +V++DNT+V+ +KK+C +
Sbjct: 149 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCCAS 184
>gi|27763985|emb|CAD43221.1| autophagin-2 [Mus musculus]
gi|148675648|gb|EDL07595.1| mCG64870 [Mus musculus]
Length = 396
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KL +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLTLFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>gi|76156435|gb|AAX27646.2| SJCHGC05841 protein [Schistosoma japonicum]
Length = 414
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W+W+ + Y ++L+MF+DRR+ YSI I LTG S GK++G WFGPNT+AQVL+
Sbjct: 96 GRSWRWSPEQESPEYYRLLQMFQDRRSVLYSIQTITLTGLSVGKSIGSWFGPNTIAQVLK 155
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKR--KLAKYDDWSS 131
KL+ YD W+++ H+++++ ++++++K LC + A +D+S+
Sbjct: 156 KLSVYDRWTNLFVHISVEDGIIIDEIKSLCCQRRPYFNFANNNDYSN 202
>gi|257205644|emb|CAX82473.1| autophagy-related cysteine endopeptidase 2 [Schistosoma japonicum]
Length = 632
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W+W+ + Y ++L+MF+DRR+ YSI I LTG S GK++G WFGPNT+AQVL+
Sbjct: 96 GRSWRWSPEQESPEYYRLLQMFQDRRSVLYSIQTITLTGLSVGKSIGSWFGPNTIAQVLK 155
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKR--KLAKYDDWSS 131
KL+ YD W+++ H+++++ ++++++K LC + A +D+S+
Sbjct: 156 KLSVYDRWTNLFVHISVEDGIIIDEIKSLCCQRRPYFNFANNNDYSN 202
>gi|18181958|dbj|BAB83890.1| Apg4B [Homo sapiens]
Length = 392
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G E K++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGE-KSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 152 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 185
>gi|26334447|dbj|BAC30924.1| unnamed protein product [Mus musculus]
Length = 396
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ + ++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYDSMDNTVVIEDIKKMC 186
>gi|402581511|gb|EJW75459.1| peptidase family C54 containing protein [Wuchereria bancrofti]
Length = 256
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 64/92 (69%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G +W W+ + K Y +IL+MF+D++ +SIHQIA G SEGK +GEWFGPNT AQVL+
Sbjct: 94 GHNWLWDRDVKLTEYKRILRMFQDKKNCLFSIHQIANMGVSEGKEIGEWFGPNTAAQVLK 153
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL YD WS + HVALDN L+ + ++ + T
Sbjct: 154 KLVIYDQWSRLTVHVALDNVLITSDIRTMAFT 185
>gi|349605276|gb|AEQ00569.1| Cysteine protease ATG4A-like protein, partial [Equus caballus]
Length = 369
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRD W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 67 GRDLNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 126
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 127 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 157
>gi|453230621|ref|NP_001263575.1| Protein ATG-4.1, isoform b [Caenorhabditis elegans]
gi|412974713|emb|CCO25637.1| Protein ATG-4.1, isoform b [Caenorhabditis elegans]
Length = 481
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V +WFGPNT AQV++
Sbjct: 131 GRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMK 190
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS+I HVALDN LV + T+
Sbjct: 191 KLTIFDDWSNIAVHVALDNILVKEDAITMATS 222
>gi|212645205|ref|NP_493375.2| Protein ATG-4.1, isoform a [Caenorhabditis elegans]
gi|193247781|emb|CAB54483.2| Protein ATG-4.1, isoform a [Caenorhabditis elegans]
Length = 454
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V +WFGPNT AQV++
Sbjct: 104 GRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMK 163
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS+I HVALDN LV + T+
Sbjct: 164 KLTIFDDWSNIAVHVALDNILVKEDAITMATS 195
>gi|195995623|ref|XP_002107680.1| hypothetical protein TRIADDRAFT_20340 [Trichoplax adhaerens]
gi|190588456|gb|EDV28478.1| hypothetical protein TRIADDRAFT_20340 [Trichoplax adhaerens]
Length = 385
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W N ++ A Y KILK+F D + + YSIHQIA G SEGK + +WFGPNT AQVL
Sbjct: 92 GRDWRWFKNKEQLANYWKILKLFLDSKDSLYSIHQIAQMGVSEGKKISQWFGPNTAAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KL +D+WS + +VA+DN +V++ +KK+C
Sbjct: 152 KKLIMFDEWSQMGVYVAMDNIVVIDDIKKIC 182
>gi|341903727|gb|EGT59662.1| CBN-ATG-4.1 protein [Caenorhabditis brenneri]
Length = 433
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ + Y KIL+MF D + A YSIHQIA G +EGK + +WFGPNT AQVL+
Sbjct: 75 GRHFEWDIETTSVVYEKILQMFFDEKDALYSIHQIAQMGVTEGKEISKWFGPNTAAQVLK 134
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS++ HVALDN LV + TT
Sbjct: 135 KLTIFDDWSNVAVHVALDNILVKEDALTMATT 166
>gi|341885317|gb|EGT41252.1| hypothetical protein CAEBREN_15768 [Caenorhabditis brenneri]
Length = 457
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ + Y KIL+MF D + A YSIHQIA G +EGK + +WFGPNT AQVL+
Sbjct: 99 GRHFEWDIETTSVVYEKILQMFFDEKDALYSIHQIAQMGVTEGKEISKWFGPNTAAQVLK 158
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS++ HVALDN LV + TT
Sbjct: 159 KLTIFDDWSNVAVHVALDNILVKEDALTMATT 190
>gi|444518589|gb|ELV12252.1| Cysteine protease ATG4B, partial [Tupaia chinensis]
Length = 324
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 27 GRDWQWNV-NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W + ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 97 GRDWRWAQWTQQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 156
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQV 112
+KLA +D WSS+ H+A+DNT+V ++
Sbjct: 157 KKLAVFDTWSSLAVHIAMDNTVVTGEI 183
>gi|225709006|gb|ACO10349.1| Cysteine protease ATG4B [Caligus rogercresseyi]
Length = 381
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
Query: 27 GRDWQWNV-----NSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS--EGKAVGEWFGPN 79
GR+W+W+ N + + YL+ILK+F+D + APYS+HQIAL G S K VG WFGPN
Sbjct: 99 GREWKWSSQETLDNDQSQKYLQILKLFQDSKAAPYSLHQIALMGESIQSKKPVGTWFGPN 158
Query: 80 TVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
T+AQVLRKL+ + + I HVA+DNT++V+++K+ C
Sbjct: 159 TIAQVLRKLSVSETTNPIRVHVAMDNTVIVDEIKESC 195
>gi|225718596|gb|ACO15144.1| Cysteine protease ATG4B [Caligus clemensi]
Length = 390
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 9/99 (9%)
Query: 27 GRDWQWNVNSKEEA-------YLKILKMFEDRRTAPYSIHQIALTGAS--EGKAVGEWFG 77
GRDW+W+ E YLKIL +F+D + APYSIHQIAL G S K VG WFG
Sbjct: 99 GRDWKWDHKVDNEVDEDLKGKYLKILNLFQDSKVAPYSIHQIALMGESIQSKKPVGTWFG 158
Query: 78 PNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
PNTVAQVL+KL+ ++ I HVA+DNT++++++K+ C
Sbjct: 159 PNTVAQVLKKLSFFEKTVPIRLHVAMDNTVIIDEIKESC 197
>gi|198417051|ref|XP_002128504.1| PREDICTED: similar to autophagy-related cysteine endopeptidase 2
[Ciona intestinalis]
Length = 422
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 28 RDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
+DW+W + + Y +IL D R++ YSIHQIA G EGK VG+WFGPNT++QVLR
Sbjct: 108 KDWKWTEDKPQPPPYKRILHQLSDERSSCYSIHQIAQMGVEEGKEVGQWFGPNTISQVLR 167
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+L+++D + + HVA+DNT+ + +++LC+T
Sbjct: 168 RLSQFDQENVLAIHVAMDNTVCIEDIERLCST 199
>gi|340369400|ref|XP_003383236.1| PREDICTED: cysteine protease ATG4A-like [Amphimedon queenslandica]
Length = 394
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 27 GRDWQWNVNSKEE-AYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ +S + Y KIL+MF D R + YSI IAL GA G++VG+WFGPN VAQ +
Sbjct: 112 GRDWRWSPSSSNDYKYQKILRMFLDYRDSEYSIQMIALQGADFGRSVGQWFGPNNVAQAI 171
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKL 115
++LA +D WS + +VA+D +V++ +
Sbjct: 172 KRLAVHDQWSEVAVYVAMDMLVVIDDISNF 201
>gi|358339268|dbj|GAA47364.1| autophagy-related protein 4 [Clonorchis sinensis]
Length = 700
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 61/86 (70%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G+DW+W ++EAY ++ +MF+D +++ YSI I + G + K +G WFGPNTVAQV++
Sbjct: 13 GKDWRWTPGCQDEAYCRLRRMFQDHKSSLYSIQNITMLGMALDKPIGSWFGPNTVAQVIK 72
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQV 112
KL YD ++ H+++++ ++V+++
Sbjct: 73 KLCAYDPCTNWYVHISVEDGVIVDEI 98
>gi|195350257|ref|XP_002041657.1| GM16788 [Drosophila sechellia]
gi|194123430|gb|EDW45473.1| GM16788 [Drosophila sechellia]
Length = 269
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 56 YSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKL 115
YSIHQIA G S+ KAVGEW GPNTVAQ+L+KL ++DDWSS+ HVA+D+T+V++ V
Sbjct: 4 YSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLVRFDDWSSLAIHVAMDSTVVLDDVYAS 63
Query: 116 C 116
C
Sbjct: 64 C 64
>gi|312378951|gb|EFR25375.1| hypothetical protein AND_09326 [Anopheles darlingi]
Length = 350
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQVL 85
GRDWQW+ +++ YLKI+ FED + AP+S+HQIAL G +SE K +GEWFGPNTVAQVL
Sbjct: 121 GRDWQWSEETRDATYLKIVNRFEDNKQAPFSLHQIALMGDSSEEKRIGEWFGPNTVAQVL 180
Query: 86 RKL 88
++
Sbjct: 181 NEV 183
>gi|426218487|ref|XP_004003478.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4B [Ovis
aries]
Length = 454
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 17/94 (18%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y ++ G EGK++G+W+GPNTVAQVL
Sbjct: 140 GRDWRWAQRKRQPDSYCRVPPQM----------------GVGEGKSIGQWYGPNTVAQVL 183
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ V++LC +
Sbjct: 184 KKLAVFDAWSALAVHVAMDNTVVMADVRRLCRSG 217
>gi|90080692|dbj|BAE89827.1| unnamed protein product [Macaca fascicularis]
Length = 263
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 47/55 (85%)
Query: 65 GASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
G EGK++G+W+GPNTVAQVL+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 2 GVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 56
>gi|351695136|gb|EHA98054.1| Cysteine protease ATG4A [Heterocephalus glaber]
Length = 356
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 46/55 (83%)
Query: 62 ALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
A G EGK+VGEWFGPNTVAQVL+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 148 AQMGVGEGKSVGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 202
>gi|444730159|gb|ELW70550.1| Cysteine protease ATG4A [Tupaia chinensis]
Length = 364
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 46/55 (83%)
Query: 62 ALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
A G EGK++GEWFGPNTVAQVL+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 79 AQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 133
>gi|170572866|ref|XP_001892265.1| Peptidase family C54 containing protein [Brugia malayi]
gi|158602497|gb|EDP38912.1| Peptidase family C54 containing protein [Brugia malayi]
Length = 440
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR+W W+ + Y +IL G SEGK +GEWFGPNT AQVL+
Sbjct: 123 GRNWLWDRDVMLTEYKRILPNM----------------GVSEGKEIGEWFGPNTAAQVLK 166
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL YD WS + HVALDN L+ + ++ + T
Sbjct: 167 KLVIYDQWSRLTVHVALDNVLITSDIRTMAFT 198
>gi|313228003|emb|CBY23152.1| unnamed protein product [Oikopleura dioica]
Length = 355
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQV 84
GR++ W+ +S E E Y +IL++F D +A S+ QIALTGA+ E +AVGEWFGPNT+AQV
Sbjct: 93 GRNYVWSESSIEDERYTEILELFRDTHSAELSLQQIALTGATAEKRAVGEWFGPNTMAQV 152
Query: 85 LRKLAKYDDWSSIVFHVALDNTLVVNQV 112
L+++ K V VA+D+ + V V
Sbjct: 153 LKRITKSRSLGFGV-TVAMDSVVSVEDV 179
>gi|440798079|gb|ELR19150.1| cysteine protease, putative [Acanthamoeba castellanii str. Neff]
Length = 434
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G +W+ + Y K+++ F D P+S+H+IA G GK VGEWFGP+T+AQVL
Sbjct: 161 GTEWRRQSDRSSPLYAKMVQWFADDPKQPFSLHRIAHAGLKYGKNVGEWFGPSTMAQVLE 220
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD------WSSIVFHVAL 138
+L K S + +V D L ++Q+++ T L + DD W+ ++ + L
Sbjct: 221 ELLKEFSPSGLRAYVCQDGCLYLDQLRRTATAAHWPLDEDDDEGQGKSWAPMLIMLPL 278
>gi|320166566|gb|EFW43465.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 336
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 27 GRDW-QWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
G++W + + + + L +F D AP+SIH+IA G + GK +G+WFGPNTVAQVL
Sbjct: 77 GKNWAPTSRKQRHQEMARFLPLFFDTPAAPFSIHRIAERGEALGKTIGQWFGPNTVAQVL 136
Query: 86 RKLAKYDDWSSIVFHVALDNTL 107
+ L SS++ H A+D L
Sbjct: 137 KNLVN-SQRSSLIVHCAMDGVL 157
>gi|348511374|ref|XP_003443219.1| PREDICTED: cysteine protease ATG4D-like [Oreochromis niloticus]
Length = 459
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL--AKYDDWSSIVFH 100
+IL+ F D TAP+ IH++ G S GK G+W+GP+ A +LRK A D ++V +
Sbjct: 204 RILRWFADNPTAPFGIHRLVELGKSSGKKAGDWYGPSIAAHILRKAVEASVVDLPNLVAY 263
Query: 101 VALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
VA D T+ + V+KLC +R L ++ W S++ V + N + VKKL
Sbjct: 264 VAQDCTIYLQDVRKLC---ERPLPQH--WKSVLILVPVRLGGQDLNPSYITSVKKL 314
>gi|328769729|gb|EGF79772.1| hypothetical protein BATDEDRAFT_35298 [Batrachochytrium
dendrobatidis JAM81]
Length = 441
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 27 GRDWQWNVNSKEEA---YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
GRDW+ ++ + Y IL F D T+PYSI +IA G K +GEWFGP+T++Q
Sbjct: 189 GRDWRLGDSNDRDTWLTYCSILTKFLDVNTSPYSIQRIATLGIRFDKQIGEWFGPSTISQ 248
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNK 120
VL+ L D S+ HV+ D + N++ + + +
Sbjct: 249 VLKVLVNDDQRISLKVHVSNDGVVYKNEINTILSATR 285
>gi|307174864|gb|EFN65142.1| Cysteine protease ATG4D [Camponotus floridanus]
Length = 477
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 21/129 (16%)
Query: 25 FSGRDWQWNVNSKEEA---------YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEW 75
F GR+W+W E + I+K F D+ +P+SIH++ L GAS GK G+W
Sbjct: 187 FLGREWRWRPEQPIETLQQRLDDRNHRMIIKWFGDQSESPFSIHRLVLLGASAGKRAGDW 246
Query: 76 FGPNTVAQVLRKLAKY------DDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
+GP++VA +L + + ++ + +VA D + + V+ +C T K W
Sbjct: 247 YGPSSVAHLLSQAVECASKQSNSNFDHLAVYVAQDCAVYLQDVENICRTPDGK------W 300
Query: 130 SSIVFHVAL 138
++V V L
Sbjct: 301 KALVLLVPL 309
>gi|330840249|ref|XP_003292131.1| hypothetical protein DICPUDRAFT_99239 [Dictyostelium purpureum]
gi|325077656|gb|EGC31355.1| hypothetical protein DICPUDRAFT_99239 [Dictyostelium purpureum]
Length = 603
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
G DW+ + NS + Y I+ MF D+ +AP+SIH IAL G + GK +GEWF P+ ++Q +
Sbjct: 191 GDDWKKSSNSTHPDVYNNIISMFLDKPSAPFSIHNIALEGQTLGKNIGEWFAPSIISQAI 250
Query: 86 RKL-AKYDDWSSIVFHVALDNTLVVNQV 112
+ L +K + +I ++ D +L ++Q+
Sbjct: 251 KSLVSKNYEKCNISVFISEDGSLYIDQL 278
>gi|432871194|ref|XP_004071879.1| PREDICTED: cysteine protease ATG4D-like [Oryzias latipes]
Length = 452
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSS 96
E + K++ F D AP+ IH++ GAS GK G+W+GP+ VA +L+K +A D +
Sbjct: 191 EAMHRKVVSWFADHPKAPFGIHRLVELGASSGKKAGDWYGPSIVAHILQKAVAASVDLPN 250
Query: 97 IVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V +VA D T+ + V+ LC + W S++ V + N ++ VKKL
Sbjct: 251 LVVYVAQDCTIYLQDVRGLC-----ERPPPHSWKSVIILVPVRLGGQDLNPSYISCVKKL 305
>gi|410918329|ref|XP_003972638.1| PREDICTED: cysteine protease ATG4D-like [Takifugu rubripes]
Length = 499
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSS 96
E + K++ F D+ TAP+ IHQ+ G S GK G+W+GP VA +LRK +A+ S
Sbjct: 228 EPTHQKLVFWFGDQPTAPFGIHQLVEIGKSAGKKAGDWYGPAIVAHILRKAVARASAVHS 287
Query: 97 IVFHVALDNTLVVNQVKKLCTTNKRKLA----KYDDWSSIVFHVAL 138
+V +VA D T+ V LC + + W S++ V +
Sbjct: 288 LVVYVAQDCTVYKEDVMHLCDPTPSQTPSDPLSHQAWKSVIILVPV 333
>gi|328874598|gb|EGG22963.1| hypothetical protein DFA_05093 [Dictyostelium fasciculatum]
Length = 432
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQV 84
G+DW+ N + E + K++++F DR +AP+SIH IAL G + GK++GEWF P+ ++
Sbjct: 143 GKDWKKPQNGEYPEDFYKVVRLFLDRPSAPFSIHNIALHGRNHLGKSIGEWFAPSNISNA 202
Query: 85 LRKLA-KYDD 93
+R L KYD+
Sbjct: 203 IRALVYKYDN 212
>gi|432845798|ref|XP_004065858.1| PREDICTED: cysteine protease ATG4D-like [Oryzias latipes]
Length = 497
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 26 SGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
S RD Q E + K++ +F D+ AP+ +HQ+ G GK G+W+GP+ VA +L
Sbjct: 219 SSRDRQ-----AEPTHQKLVTLFGDQPPAPFGVHQLVDIGKGSGKKAGDWYGPSVVAHIL 273
Query: 86 RK-LAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
RK +AK S+ +VA D T+ V +LC
Sbjct: 274 RKAVAKTSVGQSLAVYVAQDCTVYKEDVLQLC 305
>gi|347971093|ref|XP_554420.4| AGAP004023-PA [Anopheles gambiae str. PEST]
gi|333469628|gb|EAL39379.4| AGAP004023-PA [Anopheles gambiae str. PEST]
Length = 606
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 23 SSFSGRDWQWNVNS----KEEAYLKILKMFED--RRTAPYSIHQIALTGASEGKAVGEWF 76
+ F GR W+W+V+ +E + K+++ F D +T+P+SIH + G GK G+W+
Sbjct: 246 AHFLGRSWRWDVSMFTAYEESIHRKVIRWFGDTSSKTSPFSIHTLVALGKESGKKPGDWY 305
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP VA +LR+ + D I +VA D + + + CT
Sbjct: 306 GPGAVAHLLRQAVRLAAQEITDLDGINVYVAQDCAVYIQDILDECT 351
>gi|121934653|sp|Q0U199.1|ATG4_PHANO RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
Length = 467
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+W N ++ + +IL +F D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRWQENHADKDHAEILSLFADDPQAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA + + +V+ D V
Sbjct: 228 QDLANKHREAGLKVYVSGDGADV 250
>gi|328786958|ref|XP_393739.4| PREDICTED: cysteine protease ATG4D-like [Apis mellifera]
Length = 525
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 22/130 (16%)
Query: 25 FSGRDWQWNVNSK---------EEAYLKILKMFED--RRTAPYSIHQIALTGASEGKAVG 73
F GR+W+W + E + I+K F D RT+P+SIH + GA GK G
Sbjct: 233 FLGREWRWQPDQPIKTEQQKLDEYNHRLIIKSFGDLPERTSPFSIHTLVSLGALWGKRAG 292
Query: 74 EWFGPNTVAQVLRK-----LAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+W+GP++VA +L + + ++ ++++ +VA D + + ++ +C T+ K
Sbjct: 293 DWYGPSSVAHLLSQAVENAVERHPAFNNLAVYVAQDCAVYLQDIENVCQTSDGK------ 346
Query: 129 WSSIVFHVAL 138
W S++ V L
Sbjct: 347 WKSLILFVPL 356
>gi|169622773|ref|XP_001804795.1| hypothetical protein SNOG_14613 [Phaeosphaeria nodorum SN15]
gi|160704853|gb|EAT78153.2| hypothetical protein SNOG_14613 [Phaeosphaeria nodorum SN15]
Length = 357
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+W N ++ + +IL +F D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRWQENHADKDHAEILSLFADDPQAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKL 123
+ LA + + +V+ D V K ++ L
Sbjct: 228 QDLANKHREAGLKVYVSGDGADVYEDKLKQVAVDEDGL 265
>gi|156396522|ref|XP_001637442.1| predicted protein [Nematostella vectensis]
gi|156224554|gb|EDO45379.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 25 FSGRDWQ----WNVNSKEEAYLKILKMF---EDRRTAPYSIHQIALTGASEGKAVGEWFG 77
F +DW+ + +E Y IL+ F +D +P+S+H++ G GK G+W+G
Sbjct: 103 FLKKDWRISGRCHSREQEHYYRVILQFFGDQDDEERSPFSLHRLVTLGQHTGKQAGDWYG 162
Query: 78 PNTVAQVLRKL---AKYDDWSSIVFHVALDNTLVVNQVKKLCT---TNKRKLAKYDDWSS 131
P +VA +L K A + I +VA D T+ +++VK++CT T++R + W
Sbjct: 163 PASVAHILEKAMISATHPLLHDINIYVAQDCTVYIDEVKRVCTHCRTHQRDCSS-GKWRP 221
Query: 132 IVFHVALD------NTLVVNQVKKLCTTNK 155
++ V + N + + VK L T ++
Sbjct: 222 VIILVPMRLGGEALNPIYIPCVKSLFTLDQ 251
>gi|332026942|gb|EGI67039.1| Cysteine protease ATG4D [Acromyrmex echinatior]
Length = 392
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Query: 25 FSGRDWQWNV--NSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
F GR+W+W ++ E ++ I+K F D+ T +P+SIH++ GAS GK G+W+GP++
Sbjct: 107 FLGREWRWRPEQSTDESSHRMIIKWFGDQPTPESPFSIHKLVSLGASTGKRAGDWYGPSS 166
Query: 81 VAQVLRKLAKY--DDWSS----IVFHVALDNTLVVNQVKKLCTT 118
VA +L + + +D +S + +VA D + + V+ +C T
Sbjct: 167 VAHLLCQAMERASEDPNSKLNQLAVYVAQDCAVYMQDVENVCCT 210
>gi|154300262|ref|XP_001550547.1| hypothetical protein BC1G_11320 [Botryotinia fuckeliana B05.10]
gi|166990615|sp|A6SDQ3.1|ATG4_BOTFB RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|347841273|emb|CCD55845.1| similar to cysteine protease atg4 [Botryotinia fuckeliana]
Length = 439
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ V+S EE KIL +F D APYSIH+ GAS GK GEWFGP+ A+ +
Sbjct: 177 GREWRRGVSSNEER--KILSLFADDPRAPYSIHKFVEHGASACGKHPGEWFGPSATARCI 234
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ S + ++ D + V
Sbjct: 235 QALSNSQAKSELRVYITGDGSDV 257
>gi|307205961|gb|EFN84087.1| Cysteine protease ATG4D [Harpegnathos saltator]
Length = 456
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 25 FSGRDWQWNVNSKEEA---------YLKILKMFED--RRTAPYSIHQIALTGASEGKAVG 73
F GR+W+W E + I+K F D + +P+SIH++ GAS GK G
Sbjct: 163 FLGREWKWRPEQSIENTQQMRDDSNHRMIIKWFADQSKPESPFSIHRLVSLGASTGKRAG 222
Query: 74 EWFGPNTVAQVLRKLAKY------DDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD 127
+W+GPN+VA +L + + S + +VA D + + V+++C T+
Sbjct: 223 DWYGPNSVAHLLSQAVERTGELPNSKLSRLAVYVAQDCAVYMQDVEEVCRTSD------G 276
Query: 128 DWSSIVFHVALD-NTLVVNQVKKLCTTN 154
W S++ V L T +N V C T+
Sbjct: 277 GWKSLILLVPLMLGTDKLNPVYAPCVTS 304
>gi|380015613|ref|XP_003691794.1| PREDICTED: cysteine protease ATG4D-like [Apis florea]
Length = 486
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 22/130 (16%)
Query: 25 FSGRDWQWNVNSK---------EEAYLKILKMFED--RRTAPYSIHQIALTGASEGKAVG 73
F GR+W+W + E + I+K F D RT+P+SIH + GA GK G
Sbjct: 194 FLGREWRWQPDQPIKTEQQKLDEYNHRLIIKSFGDLPERTSPFSIHTLVSLGALWGKRAG 253
Query: 74 EWFGPNTVAQVLRKLA-----KYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+W+GP++VA +L + ++ ++++ +VA D + + ++ +C T K
Sbjct: 254 DWYGPSSVAHLLSQAVENAAERHPAFNNLAVYVAQDCAVYLQDIENVCQTPDGK------ 307
Query: 129 WSSIVFHVAL 138
W S++ V L
Sbjct: 308 WKSLILFVPL 317
>gi|340722130|ref|XP_003399462.1| PREDICTED: cysteine protease ATG4D-like [Bombus terrestris]
Length = 485
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 25 FSGRDWQWNVNSK---------EEAYLKILKMFED--RRTAPYSIHQIALTGASEGKAVG 73
F GR+W+W V+ E + I+K F D T+P+SIH + GA GK G
Sbjct: 193 FLGREWRWQVDQPLKTEQQKLDEYNHRLIIKSFGDLPDSTSPFSIHTLVSLGALSGKRAG 252
Query: 74 EWFGPNTVAQVLRKLA-----KYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+W+GP++VA +L + ++ +S++ +VA D + + V+ +C K
Sbjct: 253 DWYGPSSVAHLLSQAVEQAAERHPVFSNLAVYVAQDCAVYLQDVENVCQMPDGK------ 306
Query: 129 WSSIVFHVAL 138
W S++ V L
Sbjct: 307 WKSLILFVPL 316
>gi|157126425|ref|XP_001660889.1| hypothetical protein AaeL_AAEL010516 [Aedes aegypti]
gi|108873276|gb|EAT37501.1| AAEL010516-PA [Aedes aegypti]
Length = 583
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 25 FSGRDWQWN------------VNSKEEAYLKILKMFED--RRTAPYSIHQIALTGASEGK 70
F GR+W+W+ +N ++ + KI++ F D RT+P+SIH + G GK
Sbjct: 219 FLGRNWRWDATAESLRMNYHSLNYEDNVHRKIIRWFGDTSSRTSPFSIHTLVALGKETGK 278
Query: 71 AVGEWFGPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCTTN 119
G+W+GP +VA +LR+ K D + +VA D + + + CT +
Sbjct: 279 KPGDWYGPGSVAHLLRQAVKLAAQEISDLDGVNVYVAQDCAVYIQDIIDECTVS 332
>gi|281208441|gb|EFA82617.1| hypothetical protein PPL_04309 [Polysphondylium pallidum PN500]
Length = 646
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 35 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKLA-KYD 92
N E I++MF D+ TAP+SIH IAL G + GK VGEWF P+ + ++ L K++
Sbjct: 451 NEYPELLYNIVRMFLDKPTAPFSIHNIALHGQNHLGKNVGEWFAPSNITHAIKSLVNKFN 510
Query: 93 DWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALDNTL 142
+I ++ D +L V+Q+ + +S+ F A D+ L
Sbjct: 511 LQCNISVVISEDGSLYVDQMLDAALQPNGSIVGGKPRASLYFIAAQDDNL 560
>gi|189233733|ref|XP_971091.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270015047|gb|EFA11495.1| hypothetical protein TcasGA2_TC014208 [Tribolium castaneum]
Length = 453
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 22/128 (17%)
Query: 27 GRDWQWNVNSK---EEAYL------KILKMFEDR--RTAPYSIHQIALTGASEGKAVGEW 75
GRDW+W + + E+++ KI+K F D+ R +P+SIH + G + GK G+W
Sbjct: 163 GRDWRWQPDHQPTTRESFIEVVNHRKIIKWFGDKPSRNSPFSIHTLVALGEASGKKAGDW 222
Query: 76 FGPNTVAQVLR---KLAKYDDWS--SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWS 130
+GP VA + R K A D++ S+ VA D + + V + CT K W
Sbjct: 223 YGPGFVAHLFRQAFKRASEDNYEFDSLTVCVAQDCAVYIKDVMEECTDKNGK------WK 276
Query: 131 SIVFHVAL 138
S++ + +
Sbjct: 277 SLILLIPV 284
>gi|350426238|ref|XP_003494376.1| PREDICTED: cysteine protease ATG4D-like [Bombus impatiens]
Length = 486
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 25 FSGRDWQWNVNSK---------EEAYLKILKMFED--RRTAPYSIHQIALTGASEGKAVG 73
F GR+W+W V+ E + I+K F D T+P+SIH + GA GK G
Sbjct: 194 FLGREWRWQVDQPLKTEQQKLDEHNHRLIIKSFGDLPDSTSPFSIHTLVSLGALWGKRAG 253
Query: 74 EWFGPNTVAQVLRKLA-----KYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+W+GP++VA +L + ++ +S++ +VA D + + V+ +C K
Sbjct: 254 DWYGPSSVAHLLSQAVEQAAERHPVFSNLAVYVAQDCAVYLQDVENVCQMPDGK------ 307
Query: 129 WSSIVFHVAL 138
W S++ V L
Sbjct: 308 WKSLILFVPL 317
>gi|189515077|ref|XP_001333093.2| PREDICTED: cysteine protease ATG4D-like [Danio rerio]
Length = 485
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVFHV 101
K++ F D +AP+ +HQ+ G GK G+W+GP+ VA +LRK +A+ ++ + +V
Sbjct: 228 KVVSCFGDHPSAPFGVHQLVELGKESGKRAGDWYGPSVVAHMLRKAVARAAEFEDLAVYV 287
Query: 102 ALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHV 136
A D T+ V LC ++ W S+V V
Sbjct: 288 AQDCTVYKEDVMSLCESSGV------GWKSVVILV 316
>gi|67526025|ref|XP_661074.1| hypothetical protein AN3470.2 [Aspergillus nidulans FGSC A4]
gi|40743824|gb|EAA63010.1| hypothetical protein AN3470.2 [Aspergillus nidulans FGSC A4]
Length = 379
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE K+L +F D AP+SIH GA GK GEWFGP A+ +
Sbjct: 124 GRDWRRGERLEEEG--KLLSLFADSPHAPFSIHSFVKHGADFCGKHPGEWFGPTATARCI 181
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRK 122
+ LA D S++ ++A DN+ V+Q K + + K
Sbjct: 182 QGLAARYDQSNLQVYIADDNS-DVHQDKFMSVSRDEK 217
>gi|357528776|sp|Q5B7L0.2|ATG4_EMENI RecName: Full=Cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|259485537|tpe|CBF82642.1| TPA: Cysteine protease atg4 (EC 3.4.22.-)(Autophagy-related protein
4) [Source:UniProtKB/Swiss-Prot;Acc:Q5B7L0] [Aspergillus
nidulans FGSC A4]
Length = 402
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE K+L +F D AP+SIH GA GK GEWFGP A+ +
Sbjct: 147 GRDWRRGERLEEEG--KLLSLFADSPHAPFSIHSFVKHGADFCGKHPGEWFGPTATARCI 204
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA D S++ ++A DN+ V
Sbjct: 205 QGLAARYDQSNLQVYIADDNSDV 227
>gi|167526339|ref|XP_001747503.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773949|gb|EDQ87583.1| predicted protein [Monosiga brevicollis MX1]
Length = 355
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 28 RDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
RD+ E A + ILK FEDR S+H +A+ GK G+W P VA VLR
Sbjct: 100 RDYDKLSYPSEAARMSILKEFEDRPDRVLSVHAMAMQSKFVGKRAGQWHTPTDVAHVLRL 159
Query: 88 LAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKL 123
+ + HVA+D+ +V++ ++KL ++ L
Sbjct: 160 AVNEQEAMGLQVHVAMDSMVVLDDLRKLFRADRATL 195
>gi|302684483|ref|XP_003031922.1| hypothetical protein SCHCODRAFT_109321 [Schizophyllum commune H4-8]
gi|300105615|gb|EFI97019.1| hypothetical protein SCHCODRAFT_109321, partial [Schizophyllum
commune H4-8]
Length = 602
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 23 SSFSGRDWQW--NVNSKEEA-YLKILKMFED--RRTAPYSIHQIALTGASEGKAVGEWFG 77
+++ GRDW+ V + + + Y+ +L +F D TAP+SIH++AL G GK +G+WFG
Sbjct: 207 TAWFGRDWRRISEVETHQHSLYVHLLSLFLDTPHPTAPFSIHRMALAGKQLGKDIGQWFG 266
Query: 78 PNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
P+T A ++ L + I V +D L ++V
Sbjct: 267 PSTAAGAIKNLVSAYPLAGIGVVVGMDGALSKSEV 301
>gi|66810578|ref|XP_638996.1| hypothetical protein DDB_G0283753 [Dictyostelium discoideum AX4]
gi|60467622|gb|EAL65643.1| hypothetical protein DDB_G0283753 [Dictyostelium discoideum AX4]
Length = 551
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G +W+ S + I+ MF D+ +AP+SIH IA+ G + GK +GEWF P+ ++Q ++
Sbjct: 195 GDEWK---RSSSATHPDIISMFLDKPSAPFSIHNIAMEGQNLGKNIGEWFAPSIISQTIK 251
Query: 87 KLAKYD-DWSSIVFHVALDNTLVVNQV 112
L + D +I ++ D +L ++Q+
Sbjct: 252 ILVSRNYDQCNISVFISEDGSLYIDQL 278
>gi|321472016|gb|EFX82987.1| hypothetical protein DAPPUDRAFT_302128 [Daphnia pulex]
Length = 405
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 30/140 (21%)
Query: 25 FSGRDWQWNVNSKEEA-------YLKILKMFEDRRT--APYSIHQIALTGA-SEGKAVGE 74
F GRDW+WN + +E + I++ F D+ + P SIHQ+ G S GK G+
Sbjct: 99 FLGRDWRWNESGAQEQQTLQESLHRMIVQWFGDKPSPACPLSIHQMVSQGHISAGKRPGD 158
Query: 75 WFGPNTVAQVLRKLAK-----YDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKY--- 126
W+GP++V+ +++++ + Y + ++ ++A D T+ ++ VK+ C+ K+ Y
Sbjct: 159 WYGPSSVSYIIKQILQRATDTYPELDTLRVYIAQDCTVYLDDVKQSCS----KICNYECE 214
Query: 127 --------DDWSSIVFHVAL 138
D W S++ + L
Sbjct: 215 ETDYELIDDQWKSLILLIPL 234
>gi|310801857|gb|EFQ36750.1| peptidase family C54 [Glomerella graminicola M1.001]
Length = 454
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ N +EE K+L +F D APYSIHQ GA + GK GEWFGP+ A+ +
Sbjct: 192 GRDWRRGQNQEEER--KLLSLFADDPRAPYSIHQFVQHGAVACGKYPGEWFGPSATARCI 249
Query: 86 RKLA 89
+ LA
Sbjct: 250 QALA 253
>gi|398389911|ref|XP_003848416.1| hypothetical protein MYCGRDRAFT_49421 [Zymoseptoria tritici IPO323]
gi|339468291|gb|EGP83392.1| hypothetical protein MYCGRDRAFT_49421 [Zymoseptoria tritici IPO323]
Length = 440
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KE+ + +IL MF D AP+SIH+ GAS G GEWFGP+ A+ +
Sbjct: 184 GRDWRRG--QKEKQHHEILSMFADTPEAPFSIHKFVEHGASACGTYPGEWFGPSATARCI 241
Query: 86 RKLA-KYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
R L KY D V+ D+ + ++ + T +
Sbjct: 242 RALTEKYHDVGLRVYARPNDSDVYIDTLTATTTQH 276
>gi|242814606|ref|XP_002486401.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714740|gb|EED14163.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 454
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ NS EE ++L +F D AP+SIH+ GA GK GEWFGP+ A +
Sbjct: 192 GRDWRRGSNSTEEN--RLLSLFADDPAAPFSIHKFVRHGALYCGKHPGEWFGPSATATCI 249
Query: 86 RKLA-KYDDWSSIVFHVALDNTLVVNQVKKLCTTNK 120
+ L+ +Y D V+ V+ DNT V K N+
Sbjct: 250 QALSDEYKDAGMNVY-VSSDNTYVYEDKFKAVAYNQ 284
>gi|348520913|ref|XP_003447971.1| PREDICTED: cysteine protease ATG4D-like [Oreochromis niloticus]
Length = 500
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 35 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDD 93
+ +E + +++ F D+ AP+ +HQ+ G GK G+W+GP+ VA +LRK + K
Sbjct: 226 DRQEHIHSRLVTWFGDQPPAPFGVHQLVDIGKGSGKKAGDWYGPSVVAHILRKAVDKTSV 285
Query: 94 WSSIVFHVALDNTLVVNQVKKLCTTNKRKLA---KYDDWSSIVFHVAL 138
+++ +VA D T+ V +LC + + + DW S++ V +
Sbjct: 286 VTNLAVYVAQDCTVYKEDVVRLCDRSLNQTSSDPSSQDWKSVIILVPV 333
>gi|194213171|ref|XP_001491090.2| PREDICTED: cysteine protease ATG4D [Equus caballus]
Length = 424
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 3 LISPKDQDFLIDWKGVTFEPSSFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIA 62
L SP W T P G W S+E + +I+ F D AP+ +HQ+
Sbjct: 131 LSSPNRYRGPARWMAPTLGP----GAPPSW---SRERRHRQIVSWFADHPRAPFGLHQLV 183
Query: 63 LTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKR 121
G S GK G+W+GP+ VA +LRK + + + +V +V+ D T+ V +L
Sbjct: 184 ELGQSSGKKAGDWYGPSLVAHILRKAVESCAEVTRLVVYVSQDCTVYKADVARL------ 237
Query: 122 KLAKYD---DWSSIVFHVALD------NTLVVNQVKKL 150
+A+ D +W S+V V + N + V VK+L
Sbjct: 238 -VARPDPTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 274
>gi|384493397|gb|EIE83888.1| hypothetical protein RO3G_08593 [Rhizopus delemar RA 99-880]
Length = 194
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 25 FSGRDWQWNVNSKE--EAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
F GRDW+ ++ + Y +I+ F D + AP+SIH+IAL G GK +GEWFGP+T
Sbjct: 129 FLGRDWRRQTQNQAAWKQYSRIVHWFLDELSPRAPFSIHRIALLGKQLGKNIGEWFGPST 188
Query: 81 VAQVLR 86
++QV++
Sbjct: 189 ISQVIQ 194
>gi|383860522|ref|XP_003705738.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D-like
[Megachile rotundata]
Length = 518
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 25 FSGRDWQWNVNSK---------EEAYLKILKMFED--RRTAPYSIHQIALTGASEGKAVG 73
F GR+W+W + E + I++ F D R +P+SIH + GA GK G
Sbjct: 227 FLGREWRWQPDQPIKTEQQKLDESNHRFIIQSFGDLPERISPFSIHTLVSLGALWGKRAG 286
Query: 74 EWFGPNTVAQVLRKLAKYDD-----WSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+W+GP++VA +L + ++ +S++ +VA D + + V+ +C K
Sbjct: 287 DWYGPSSVAHLLSQAVEHAAEHLPIFSNLAVYVAQDCAVYLQDVESVCQMPDGK------ 340
Query: 129 WSSIVFHVALD-NTLVVNQVKKLCTTN 154
W S++ V L T +N V C T+
Sbjct: 341 WKSLILFVPLRLGTDKLNPVYTSCLTH 367
>gi|195113543|ref|XP_002001327.1| GI10728 [Drosophila mojavensis]
gi|193917921|gb|EDW16788.1| GI10728 [Drosophila mojavensis]
Length = 682
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + +P+SIH + G GK G+W+
Sbjct: 328 FLGRSWRYDAESQLHSTYEDNMHKKIIKWFGDSSSKNSPFSIHALVRLGEQLGKKPGDWY 387
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + +++LC+
Sbjct: 388 GPASVSYLLKHALEHAARENADFDNISVYVAKDCTIYIQDIEELCS 433
>gi|393247625|gb|EJD55132.1| hypothetical protein AURDEDRAFT_78065 [Auricularia delicata
TFB-10046 SS5]
Length = 989
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ N S E A Y+KIL F D + AP+S+H++A++G GK VG+WFGP+T
Sbjct: 394 GRDWRRPAINSASPEFATYVKILTWFFDAPSVHAPFSVHRMAMSGKDFGKDVGQWFGPST 453
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTL 107
A +R L + + +A+D L
Sbjct: 454 AAGAIRTLVHDFPRAQLGVAIAVDGVL 480
>gi|325091702|gb|EGC45012.1| cysteine protease [Ajellomyces capsulatus H88]
Length = 508
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KEE+ K+L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 199 GRDWRRGTKIKEES--KLLSLFADDPKAPFSIHRFVEHGASACGKYPGEWFGPSATARCI 256
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ + + + +V D + V
Sbjct: 257 QALSSECEHAGLNVYVTSDGSDV 279
>gi|315047608|ref|XP_003173179.1| cysteine protease atg4 [Arthroderma gypseum CBS 118893]
gi|311343565|gb|EFR02768.1| cysteine protease atg4 [Arthroderma gypseum CBS 118893]
Length = 471
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ +++ +F D AP+SIH+ GA+ GK GEWFGP+ AQ +
Sbjct: 212 GRDWRRGSKIQEES--ELVSLFADHPRAPFSIHRFVQHGATACGKCPGEWFGPSAAAQCI 269
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ L K + + + +V D +
Sbjct: 270 QALVKSNPQAGLRVYVTNDGS 290
>gi|166990662|sp|A7F045.2|ATG4_SCLS1 RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
Length = 439
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ +S EE KIL +F D APYSIH+ GAS GK GEWFGP+ A+ +
Sbjct: 177 GREWRRGSSSNEER--KILSLFADDPRAPYSIHKFVEHGASACGKHPGEWFGPSAAARCI 234
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L S + ++ D + V
Sbjct: 235 QALTNSQVESELRVYITGDGSDV 257
>gi|358390472|gb|EHK39877.1| hypothetical protein TRIATDRAFT_208244 [Trichoderma atroviride IMI
206040]
Length = 452
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + + +EE +L + MF D APYSIH GA+ GK GEWFGP+ AQ +
Sbjct: 194 GRDWRRDQSQEEERHL--ISMFADDPRAPYSIHNFVRHGATACGKYPGEWFGPSATAQCI 251
Query: 86 RKL 88
+ L
Sbjct: 252 QAL 254
>gi|170032510|ref|XP_001844124.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872594|gb|EDS35977.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 628
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 25 FSGRDWQWNVNSK------------EEAYLKILKMFED--RRTAPYSIHQIALTGASEGK 70
F GR W+W+ + + + + KI++ F D RT+P+SIH + G GK
Sbjct: 243 FLGRGWRWDPSQEGLRLNFDSLQYEDGIHRKIIRWFGDTSSRTSPFSIHTLVALGKEAGK 302
Query: 71 AVGEWFGPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCTTN 119
G+W+GP +VA +LR+ K D I +VA D + + + CT +
Sbjct: 303 KPGDWYGPGSVAHLLRQAVKLAAKEITDLDGINVYVAQDCAVYIQDILDECTVS 356
>gi|302915349|ref|XP_003051485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732424|gb|EEU45772.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 355
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + EE +I+K+F D APYS+H GAS GK GEWFGP+ A+ +
Sbjct: 170 GRDWRRGQSPHEE--REIIKLFADHPNAPYSLHSFVRHGASACGKYPGEWFGPSATARCI 227
Query: 86 RKLAKYDDWSSIVF 99
+ LA + S V+
Sbjct: 228 QALANSHESSLRVY 241
>gi|428170513|gb|EKX39437.1| hypothetical protein GUITHDRAFT_143439 [Guillardia theta CCMP2712]
Length = 332
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 27 GRDWQWNVNSK----EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVA 82
GRDW+ + SK Y K+L+MF D AP SIH G GK G WFGPNTV
Sbjct: 155 GRDWRLSHTSKYNELPSDYRKVLEMFLDHPCAPLSIHSFVRAGQQVGKKAGTWFGPNTVC 214
Query: 83 QVLRKL 88
KL
Sbjct: 215 SAFSKL 220
>gi|342877133|gb|EGU78640.1| hypothetical protein FOXB_10826 [Fusarium oxysporum Fo5176]
Length = 449
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +EE +ILK F D APYSIH GAS GK GEWFGP+ A+ +
Sbjct: 188 GRDWRQGQSLEEEC--RILKDFADDPRAPYSIHSFVRHGASACGKYPGEWFGPSATARCI 245
Query: 86 RKLAKYDDWSSIVF 99
+ LA + S V+
Sbjct: 246 QALANSHEPSIRVY 259
>gi|340518098|gb|EGR48340.1| protease required for autophagy [Trichoderma reesei QM6a]
Length = 450
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ N +EE +++ MF D AP+SIH GA+ GK GEWFGP+ AQ +
Sbjct: 189 GRDWRRGKNQQEER--RLISMFADDPRAPFSIHNFVRHGATACGKFPGEWFGPSATAQCI 246
Query: 86 RKLAKYDD 93
+ L D
Sbjct: 247 QALTSSSD 254
>gi|417401539|gb|JAA47652.1| Putative cysteine protease required for autophagy [Desmodus
rotundus]
Length = 473
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +HQ+ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 207 QERRHRQIVSWFADHPQAPFGLHQLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 266
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 267 HLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 319
Query: 147 VKKL 150
VK+L
Sbjct: 320 VKEL 323
>gi|440790872|gb|ELR12135.1| autophagy protein 4, putative [Acanthamoeba castellanii str. Neff]
Length = 510
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 23 SSFSGRDWQWNVNSKEEAYLKILKMFEDRRTA--PYSIHQIALTGASE-GKAVGEWFGPN 79
+ + GRDW+ Y ++L+ F D ++ PYSIH IA G + K +G+WF P
Sbjct: 162 THYLGRDWRIQAEENMMTYRELLRWFADEPSSRSPYSIHAIARIGLRKFNKQIGDWFEPT 221
Query: 80 TVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
T+++ LR L + + +V D + +V +LC
Sbjct: 222 TISEALRLLVTEHSPNGLKMYVPKDGIIYRKEVYQLC 258
>gi|194378178|dbj|BAG57839.1| unnamed protein product [Homo sapiens]
Length = 411
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 145 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 204
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 205 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 257
Query: 147 VKKL 150
VK+L
Sbjct: 258 VKEL 261
>gi|16551551|dbj|BAB71121.1| unnamed protein product [Homo sapiens]
Length = 330
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 64 RERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 123
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 124 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 176
Query: 147 VKKL 150
VK+L
Sbjct: 177 VKEL 180
>gi|391340875|ref|XP_003744760.1| PREDICTED: cysteine protease ATG4D-like [Metaseiulus occidentalis]
Length = 488
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 27 GRDWQWNVNSKEE---AYLKILKMFED---RRTAPYSIHQIALTGASEGKAVGEWFGPNT 80
GR W+W +++ + KI+K F D AP+S+H + A GK G+WFGP+T
Sbjct: 199 GRQWRWCPQQQQQEHGVHRKIIKWFSDDPDTTEAPFSVHNMVRAAAHCGKKAGDWFGPST 258
Query: 81 VAQVLRKLAKY--------DDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSI 132
A +L++ + + + + +VA D T+ V LCT++ +W S+
Sbjct: 259 AAYLLKRCLEEAAGVADSKEIFEQMAIYVAQDCTIYTQDVLDLCTSDPNI-----EWKSV 313
Query: 133 VFHVAL 138
V + +
Sbjct: 314 VLLIPV 319
>gi|443917360|gb|ELU38094.1| peptidase family c54 domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 808
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GR+W+ + + ++E A Y+KIL F D + AP+ +H++AL G + GK VG WFGP+T
Sbjct: 229 GRNWRRPHYPMFAEEHAVYVKILTWFFDTPSPLAPFGVHRMALAGKALGKDVGTWFGPST 288
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
A ++ LA + +A+D T+ + V
Sbjct: 289 AAGSIKTLAHAFPECQLSVSLAVDGTVFASDV 320
>gi|27903825|ref|NP_116274.3| cysteine protease ATG4D [Homo sapiens]
gi|61211809|sp|Q86TL0.1|ATG4D_HUMAN RecName: Full=Cysteine protease ATG4D; AltName: Full=AUT-like 4
cysteine endopeptidase; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related cysteine endopeptidase
4; AltName: Full=Autophagy-related protein 4 homolog D
gi|27763975|emb|CAC85951.1| APG4-D protein [Homo sapiens]
gi|46362497|gb|AAH68992.1| ATG4 autophagy related 4 homolog D (S. cerevisiae) [Homo sapiens]
gi|119604524|gb|EAW84118.1| ATG4 autophagy related 4 homolog D (S. cerevisiae), isoform CRA_c
[Homo sapiens]
gi|312151144|gb|ADQ32084.1| ATG4 autophagy related 4 homolog D (S. cerevisiae) [synthetic
construct]
Length = 474
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|291059129|gb|ADD71908.1| autophagy protein 4 [Acanthamoeba castellanii]
Length = 373
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTA--PYSIHQIALTGASE-GKAVGEWFGPNTV 81
+ GRDW+ Y ++L+ F D ++ PYSIH IA G + K +G+WF P T+
Sbjct: 196 YLGRDWRIQAEENMMTYRELLRWFADEPSSRSPYSIHAIARIGLRKFNKQIGDWFEPTTI 255
Query: 82 AQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
++ LR L + + +V D + +V +LC
Sbjct: 256 SEALRLLVTEHSPNGLKMYVPKDGIIYRKEVYQLC 290
>gi|452004375|gb|EMD96831.1| hypothetical protein COCHEDRAFT_1123524 [Cochliobolus
heterostrophus C5]
Length = 471
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW++ + + +IL +F D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRYQDKPTAKEHCEILSLFADDPRAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA + + +V+ D V
Sbjct: 228 QDLANKHREAGLRVYVSGDGADV 250
>gi|451855330|gb|EMD68622.1| hypothetical protein COCSADRAFT_79257 [Cochliobolus sativus ND90Pr]
Length = 473
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW++ + + +IL +F D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRYQDKPTAKEHCEILSLFADDPRAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA + + +V+ D V
Sbjct: 228 QDLANKHREAGLRVYVSGDGADV 250
>gi|322785465|gb|EFZ12136.1| hypothetical protein SINV_15051 [Solenopsis invicta]
Length = 505
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 13/111 (11%)
Query: 25 FSGR-DWQWNVN--SKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPN 79
F GR W+W + E ++ I+K F D+ T +P+SIH++ + GAS GK G+W+GP+
Sbjct: 181 FLGRGQWRWRPEQLTDESSHRMIIKWFGDQLTPESPFSIHKLVVLGASTGKRAGDWYGPS 240
Query: 80 TVAQVLRKLAKY--DDWSS----IVFHVALDNTLVVNQVKKLCTT--NKRK 122
+VA +L + + +D +S + +VA D + + V+ +C T +RK
Sbjct: 241 SVAHLLCQAMERASEDPNSKLNQLAVYVAQDCAVYMQDVENVCCTPDGRRK 291
>gi|431918972|gb|ELK17839.1| Cysteine protease ATG4D [Pteropus alecto]
Length = 442
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +HQ+ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 176 QERRHRQIVSWFADHPKAPFGLHQLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 235
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 236 HLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 288
Query: 147 VKKL 150
VK+L
Sbjct: 289 VKEL 292
>gi|62898327|dbj|BAD97103.1| APG4 autophagy 4 homolog D variant [Homo sapiens]
Length = 474
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWMSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|427787309|gb|JAA59106.1| Putative peptidase family c54 [Rhipicephalus pulchellus]
Length = 517
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
Query: 27 GRDWQWNVNSKEEA----YLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNT 80
GR W++ N++ EA + +++++F DR +P+S+H++ G GK G+W+GP++
Sbjct: 232 GRQWRYRRNNQTEASDYVHRQVVRLFGDRTASASPFSLHKLVQMGHESGKQAGDWYGPSS 291
Query: 81 VAQVLRKLAKYDDWSS-----IVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFH 135
A +L++ + + + +VA D T+ + V+ LC + A W S++
Sbjct: 292 AAYILKEALEGACQTEQLLLDLRIYVAQDCTIYLEDVRALCRGTRSNGAPL--WRSVIIL 349
Query: 136 V 136
V
Sbjct: 350 V 350
>gi|406862068|gb|EKD15120.1| putative cysteine protease atg4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 441
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ ++ +E I+ +F D TAPYSIH GA+ GK GEWFGP+ A+ +
Sbjct: 177 GRDWRRGSSASQEER-SIISLFADTPTAPYSIHNFVEHGAAACGKHPGEWFGPSATARCI 235
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA + +V D V
Sbjct: 236 QALANGHQSPELRVYVTGDGLEV 258
>gi|425778592|gb|EKV16710.1| Autophagy cysteine endopeptidase Atg4, putative [Penicillium
digitatum PHI26]
Length = 401
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ KEE K++ MF D AP+SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 145 GRDWR--RGEKEEEESKLISMFADHPEAPFSIHKFVNRGAESCGKYPGEWFGPSATAKCI 202
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ + + +V D + V
Sbjct: 203 QLLSTQSEAHRLRVYVTNDTSDV 225
>gi|400593108|gb|EJP61110.1| peptidase family C54 [Beauveria bassiana ARSEF 2860]
Length = 378
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ EE +KI++MF D APYSIH G+S+ GK GEWFGP+ +Q +
Sbjct: 189 GRDWRRGQQKAEE--IKIMRMFADDPAAPYSIHNFVDYGSSKCGKYPGEWFGPSATSQCI 246
>gi|453080987|gb|EMF09037.1| putative cysteine protease atg4 [Mycosphaerella populorum SO2202]
Length = 447
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ K+E + IL +F D AP+SIH+ GA G GEWFGPN A+ L
Sbjct: 185 GRDWR--KGQKQEEHKNILSLFADTPEAPFSIHKFVEHGAQACGTYPGEWFGPNATARCL 242
Query: 86 RKL 88
R L
Sbjct: 243 RAL 245
>gi|395850895|ref|XP_003798008.1| PREDICTED: cysteine protease ATG4D [Otolemur garnettii]
Length = 471
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+S+H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 205 QEHQHRQIVSWFADHPQAPFSLHRLVELGQSLGKKAGDWYGPSVVAHILRKAVESCSEVT 264
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 265 HLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 317
Query: 147 VKKL 150
VK+L
Sbjct: 318 VKEL 321
>gi|296804856|ref|XP_002843276.1| cysteine protease atg4 [Arthroderma otae CBS 113480]
gi|238845878|gb|EEQ35540.1| cysteine protease atg4 [Arthroderma otae CBS 113480]
Length = 473
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ +EE+ ++L +F D AP+SIH+ GA+ GK GEWFGP AQ +
Sbjct: 211 GRGWRRGSQEQEES--ELLSLFADHPRAPFSIHRFVQHGATACGKCPGEWFGPAAAAQCI 268
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ LA + + ++ D +
Sbjct: 269 QALANGHPQAGLNVYITSDGS 289
>gi|326470473|gb|EGD94482.1| hypothetical protein TESG_01998 [Trichophyton tonsurans CBS 112818]
Length = 469
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ +++ +F D AP+SIH+ GA+ GK GEWFGP+ +Q +
Sbjct: 210 GRDWRRGSKVQEES--ELVSLFADHPRAPFSIHRFVHHGATACGKCPGEWFGPSAASQCI 267
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ L K + + ++ D +
Sbjct: 268 QALVKSNPQVGLRVYITSDGS 288
>gi|344282757|ref|XP_003413139.1| PREDICTED: cysteine protease ATG4D-like [Loxodonta africana]
Length = 473
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 207 QEHWHRQIVSWFADHPQAPFGLHRLVALGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 266
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKK 149
+V +V+ D T+ V +L K +W S+V V + N + V VK+
Sbjct: 267 RLVVYVSQDCTVYKADVARLVARPDPKA----EWKSVVILVPVRLGGETLNPVYVPCVKE 322
Query: 150 L 150
L
Sbjct: 323 L 323
>gi|395512609|ref|XP_003760528.1| PREDICTED: cysteine protease ATG4D [Sarcophilus harrisii]
Length = 453
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+EE + +I+ F D+ AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 187 QEEQHRRIVSWFADQPGAPFGLHRLVELGRSSGKRAGDWYGPSVVAHILRKAVESSSEVA 246
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKK 149
+ +V+ D T+ V +L +W SIV V + N + V VK+
Sbjct: 247 QLEVYVSQDCTVYKADVAQLVAQPD----PSTEWKSIVILVPVRLGGETLNPVYVPCVKE 302
Query: 150 L 150
L
Sbjct: 303 L 303
>gi|302498547|ref|XP_003011271.1| autophagy cysteine endopeptidase Atg4, putative [Arthroderma
benhamiae CBS 112371]
gi|291174820|gb|EFE30631.1| autophagy cysteine endopeptidase Atg4, putative [Arthroderma
benhamiae CBS 112371]
Length = 437
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ +++ +F D AP+SIH+ GA+ GK GEWFGP+ +Q +
Sbjct: 222 GRDWRRGSKVQEES--ELVSLFADHPRAPFSIHRFVHHGATACGKCPGEWFGPSAASQCI 279
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ L K + + ++ D +
Sbjct: 280 QALVKSNPQVGLRVYITSDGS 300
>gi|326478657|gb|EGE02667.1| cysteine protease atg4 [Trichophyton equinum CBS 127.97]
Length = 454
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ +++ +F D AP+SIH+ GA+ GK GEWFGP+ +Q +
Sbjct: 195 GRDWRRGSKVQEES--ELVSLFADHPRAPFSIHRFVHHGATACGKCPGEWFGPSAASQCI 252
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ L K + + ++ D +
Sbjct: 253 QALVKSNPQVGLRVYITSDGS 273
>gi|327306465|ref|XP_003237924.1| hypothetical protein TERG_02632 [Trichophyton rubrum CBS 118892]
gi|326460922|gb|EGD86375.1| hypothetical protein TERG_02632 [Trichophyton rubrum CBS 118892]
Length = 454
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ +++ +F D AP+SIH+ GA+ GK GEWFGP+ +Q +
Sbjct: 195 GRDWRRGSKLQEES--ELVSLFADHPRAPFSIHRFVHHGATACGKCPGEWFGPSAASQCI 252
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ L K + + ++ D +
Sbjct: 253 QALVKSNPQVGLRVYITSDGS 273
>gi|452977855|gb|EME77619.1| hypothetical protein MYCFIDRAFT_191078 [Pseudocercospora fijiensis
CIRAD86]
Length = 445
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KE + IL +F D AP+SIH+ GA G GEWFGPN A+ L
Sbjct: 184 GRDWR--KGQKEREHKDILSLFADTPDAPFSIHKFVEHGAQACGTYPGEWFGPNATARCL 241
Query: 86 RKLA-KYDDWSSIVFHVALDNTLVVNQVKKLCT 117
R L KY V+ D+ + ++ + T
Sbjct: 242 RALTDKYHQAGLRVYARPNDSDVYIDALTATAT 274
>gi|355669960|gb|AER94694.1| ATG4 autophagy related 4-like protein D [Mustela putorius furo]
Length = 388
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 174 QERRHRQIVSWFADHPRAPFGLHRLGGLGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 233
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 234 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 286
Query: 147 VKKL 150
VK+L
Sbjct: 287 VKEL 290
>gi|195054945|ref|XP_001994383.1| GH16873 [Drosophila grimshawi]
gi|193892146|gb|EDV91012.1| GH16873 [Drosophila grimshawi]
Length = 673
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + +P+SIH + G GK G+W+
Sbjct: 319 FLGRSWRYDPESQLHSTYEDNMHKKIIKWFGDSSSKNSPFSIHALVRLGEQLGKKPGDWY 378
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
GP +V+ +L+ ++ D+ +I +VA D T+ + V++ C+ + ++ W
Sbjct: 379 GPASVSYLLKHALEHAAQENADFDNISVYVAQDCTIYMQDVEQQCSIPEPAPKQHVPW 436
>gi|380485578|emb|CCF39271.1| cysteine protease atg4 [Colletotrichum higginsianum]
Length = 454
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ N ++E K+L F D APYSIHQ GA + GK GEWFGP+ A+ +
Sbjct: 192 GRDWRRGQNPEDE--RKLLSWFADDPRAPYSIHQFVQHGAVACGKYPGEWFGPSATARCI 249
Query: 86 RKLA 89
+ LA
Sbjct: 250 QALA 253
>gi|332232054|ref|XP_003265216.1| PREDICTED: cysteine protease ATG4C isoform 1 [Nomascus leucogenys]
gi|332232056|ref|XP_003265217.1| PREDICTED: cysteine protease ATG4C isoform 2 [Nomascus leucogenys]
Length = 458
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D AP+ +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPLAPFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>gi|114675367|ref|XP_512373.2| PREDICTED: cysteine protease ATG4D [Pan troglodytes]
Length = 411
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 145 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 204
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 205 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 257
Query: 147 VKKL 150
VK+L
Sbjct: 258 VKEL 261
>gi|402904208|ref|XP_003914939.1| PREDICTED: cysteine protease ATG4D isoform 2 [Papio anubis]
Length = 411
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 145 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 204
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 205 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 257
Query: 147 VKKL 150
VK+L
Sbjct: 258 VKEL 261
>gi|213390042|gb|ACJ46060.1| autophagy related protein Atg4-like protein [Bombyx mori]
Length = 355
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 23/147 (15%)
Query: 25 FSGRDWQW-------NVNSKEEAYL--KILKMFEDRRT--APYSIHQIALTGASEGKAVG 73
F GR W+W N +E L KI+K F D+ + +P SIHQ+ G + GK G
Sbjct: 69 FLGRSWRWLPEKPIQNAREFQEDCLHRKIIKWFGDKSSVNSPLSIHQMVSLGEALGKKPG 128
Query: 74 EWFGPNTVAQVLRKLAKYD-----DWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+W+GP +VA L+ L ++ + +VA D+T+ + + +C +
Sbjct: 129 DWYGPASVAHCLKSLIASASKENYEFDHLEVYVAQDSTVYIQDIYSMCQL------LHGA 182
Query: 129 WSSIVFHVALD-NTLVVNQVKKLCTTN 154
W S++ V + T N + C T+
Sbjct: 183 WKSLILLVPVKLGTEKFNPIYGPCLTS 209
>gi|355755452|gb|EHH59199.1| Cysteine protease ATG4D, partial [Macaca fascicularis]
Length = 427
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 161 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 220
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 221 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 273
Query: 147 VKKL 150
VK+L
Sbjct: 274 VKEL 277
>gi|57101974|ref|XP_542069.1| PREDICTED: cysteine protease ATG4D isoform 1 [Canis lupus
familiaris]
Length = 473
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 207 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEIT 266
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 267 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 319
Query: 147 VKKL 150
VK+L
Sbjct: 320 VKEL 323
>gi|410950450|ref|XP_003981918.1| PREDICTED: cysteine protease ATG4D, partial [Felis catus]
Length = 423
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 157 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 216
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 217 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 269
Query: 147 VKKL 150
VK+L
Sbjct: 270 VKEL 273
>gi|239614382|gb|EEQ91369.1| cysteine protease atg4 [Ajellomyces dermatitidis ER-3]
gi|327351393|gb|EGE80250.1| cysteine protease atg4 [Ajellomyces dermatitidis ATCC 18188]
Length = 494
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQ 83
F GR+W+ KEE+ L L +F D AP+SIH+ GAS GK GEWFGP+ A+
Sbjct: 191 FLGREWRRGTKVKEESNL--LSLFADDPRAPFSIHRFVEHGASACGKYPGEWFGPSATAR 248
Query: 84 VLRKLA 89
++ L+
Sbjct: 249 CIQALS 254
>gi|291414155|ref|XP_002723329.1| PREDICTED: APG4 autophagy 4 homolog D [Oryctolagus cuniculus]
Length = 408
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 142 QERRHRQIVSWFADHPGAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 201
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 202 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 254
Query: 147 VKKL 150
VK+L
Sbjct: 255 VKEL 258
>gi|261195783|ref|XP_002624295.1| cysteine protease atg4 [Ajellomyces dermatitidis SLH14081]
gi|239587428|gb|EEQ70071.1| cysteine protease atg4 [Ajellomyces dermatitidis SLH14081]
Length = 494
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQ 83
F GR+W+ KEE+ L L +F D AP+SIH+ GAS GK GEWFGP+ A+
Sbjct: 191 FLGREWRRGTKVKEESNL--LSLFADDPRAPFSIHRFVEHGASACGKYPGEWFGPSATAR 248
Query: 84 VLRKLA 89
++ L+
Sbjct: 249 CIQALS 254
>gi|388856806|emb|CCF49593.1| related to ATG4-essential for autophagy [Ustilago hordei]
Length = 1572
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 7 KDQDFLIDWKGVTFEPSSFSGRDWQW-NVNSKEEAYLKILKMFEDRRT--APYSIHQIAL 63
+ Q FL + G++ ++ +W ++ Y+KIL F D + P+ +H++A
Sbjct: 868 RQQQFLEELAGLSIADAAEKESLQEWRQKRARHATYIKILSWFLDDPSPACPFGVHRMAR 927
Query: 64 TGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVK 113
G GK VGEWFGP+T + +++L + I +A D +++V+
Sbjct: 928 EGKRLGKEVGEWFGPSTASGAIKQLVSEFPQAGIAVELARDGVFYLDEVR 977
>gi|58260832|ref|XP_567826.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117209|ref|XP_772831.1| hypothetical protein CNBK2020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817600|sp|P0CQ11.1|ATG4_CRYNB RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|338817601|sp|P0CQ10.1|ATG4_CRYNJ RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|50255449|gb|EAL18184.1| hypothetical protein CNBK2020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229907|gb|AAW46309.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1193
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 14 DWKGVTFEPSSFSGRDWQWNVNSKEE--AYLKILKMFEDRRT--APYSIHQIALTGASEG 69
DW+ V P+SFS + + ++ Y ++L F D + P+S+H++AL G G
Sbjct: 591 DWR-VPSTPASFSEATTTQEIAALKDYAKYAQMLSWFLDDPSPLCPFSVHRMALIGKELG 649
Query: 70 KAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
K VGEWFGP+T A L+ LA + A D+ + + V DDW
Sbjct: 650 KEVGEWFGPSTAAGALKTLANSFAPCGVAVATATDSIIYKSDVYTASNLPS------DDW 703
Query: 130 SSI 132
+SI
Sbjct: 704 NSI 706
>gi|410226434|gb|JAA10436.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
gi|410263516|gb|JAA19724.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
gi|410294648|gb|JAA25924.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
gi|410328737|gb|JAA33315.1| ATG4 autophagy related 4 homolog D [Pan troglodytes]
Length = 474
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|380796527|gb|AFE70139.1| cysteine protease ATG4D, partial [Macaca mulatta]
Length = 439
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 173 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 232
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 233 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 285
Query: 147 VKKL 150
VK+L
Sbjct: 286 VKEL 289
>gi|281337397|gb|EFB12981.1| hypothetical protein PANDA_010312 [Ailuropoda melanoleuca]
Length = 428
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 162 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 221
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 222 HLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 274
Query: 147 VKKL 150
VK+L
Sbjct: 275 VKEL 278
>gi|301772016|ref|XP_002921445.1| PREDICTED: cysteine protease ATG4D-like [Ailuropoda melanoleuca]
Length = 445
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 179 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 238
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 239 HLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 291
Query: 147 VKKL 150
VK+L
Sbjct: 292 VKEL 295
>gi|396482697|ref|XP_003841525.1| similar to autophagy-related protein 4 [Leptosphaeria maculans JN3]
gi|312218100|emb|CBX98046.1| similar to autophagy-related protein 4 [Leptosphaeria maculans JN3]
Length = 462
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW++ + + + IL +F D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRYQDDPTAQEHCNILSLFADDPQAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L + + +V+ D V
Sbjct: 228 QDLVHKYKEAGLRVYVSGDGADV 250
>gi|402904206|ref|XP_003914938.1| PREDICTED: cysteine protease ATG4D isoform 1 [Papio anubis]
Length = 474
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|109123366|ref|XP_001101860.1| PREDICTED: cysteine protease ATG4D-like isoform 1 [Macaca mulatta]
Length = 474
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|297276108|ref|XP_002801111.1| PREDICTED: cysteine protease ATG4D-like isoform 2 [Macaca mulatta]
Length = 497
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 231 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 290
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHV 136
+V +V+ D T+ V +L +A+ D +W S+V V
Sbjct: 291 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILV 327
>gi|189194545|ref|XP_001933611.1| peptidase family C54 protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979175|gb|EDU45801.1| peptidase family C54 protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW++ + + ++ MF D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRYQEQPDAKEHCDVVAMFADDPRAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L + + + +V+ D V
Sbjct: 228 QDLVHKNREAGLKVYVSGDGADV 250
>gi|397476492|ref|XP_003809633.1| PREDICTED: cysteine protease ATG4D isoform 2 [Pan paniscus]
Length = 411
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 145 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 204
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S++ V + N + V
Sbjct: 205 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVIILVPVRLGGETLNPVYVPC 257
Query: 147 VKKL 150
VK+L
Sbjct: 258 VKEL 261
>gi|67967551|dbj|BAE00258.1| unnamed protein product [Macaca fascicularis]
Length = 330
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 64 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 123
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 124 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 176
Query: 147 VKKL 150
VK+L
Sbjct: 177 VKEL 180
>gi|358369016|dbj|GAA85631.1| autophagy cysteine endopeptidase Atg4 [Aspergillus kawachii IFO
4308]
Length = 378
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ ++L +F D TAP+S+H+ GA S GK GEWFGP+ A+ +
Sbjct: 126 GRDWRRGARFEEES--QLLSLFADTPTAPFSVHRFVKHGAESCGKFPGEWFGPSATAKCI 183
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
L+ ++ +V+ D + V
Sbjct: 184 EALSSQCGSPTLKVYVSNDTSEV 206
>gi|402080175|gb|EJT75320.1| cysteine protease ATG4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 468
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ S EE K+L +F D APYSIH+ GA++ GK GEWFGP+ A+ +
Sbjct: 202 GRGWRRGEKSDEE--RKLLSLFADDPRAPYSIHKFVEHGAAKCGKYPGEWFGPSATARCI 259
Query: 86 RKLA 89
LA
Sbjct: 260 EALA 263
>gi|296208133|ref|XP_002750954.1| PREDICTED: cysteine protease ATG4C [Callithrix jacchus]
Length = 458
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
K++ F D AP+ +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KVISWFGDSPLAPFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYNSDV 271
>gi|327270876|ref|XP_003220214.1| PREDICTED: cysteine protease ATG4C-like [Anolis carolinensis]
Length = 459
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 14 DWKGVTFEPSSFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVG 73
++K + P RDW + E + KI+ F D A + +H++ G GK G
Sbjct: 170 EFKNQSIPPRQIRKRDWGKRESRDEHYHRKIVSWFGDSPLANFGLHRLIEYGNKSGKMAG 229
Query: 74 EWFGPNTVAQVLRKL---AKYDDWSSIVFHVALDNTLVVNQVKKL 115
+W+GP VA +LRK AK + I +VA D T+ + V ++
Sbjct: 230 DWYGPAVVAHLLRKAVEEAKDPELQGITVYVAQDCTVYKSDVVEM 274
>gi|397476490|ref|XP_003809632.1| PREDICTED: cysteine protease ATG4D isoform 1 [Pan paniscus]
Length = 474
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S++ V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVIILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|395530478|ref|XP_003767321.1| PREDICTED: cysteine protease ATG4C [Sarcophilus harrisii]
Length = 458
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 35 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKY 91
+E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 191 GGEESCHRKIVSWFADSPLACFGLHQLIEHGKKSGKTAGDWYGPAVVAHILRKAVEEARH 250
Query: 92 DDWSSIVFHVALDNTLV-VNQVKKLCTT 118
D I +VA D T+ + + K C++
Sbjct: 251 PDLQGITIYVAQDCTVYKADVIDKQCSS 278
>gi|302657364|ref|XP_003020406.1| autophagy cysteine endopeptidase Atg4, putative [Trichophyton
verrucosum HKI 0517]
gi|291184236|gb|EFE39788.1| autophagy cysteine endopeptidase Atg4, putative [Trichophyton
verrucosum HKI 0517]
Length = 398
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ +++ +F D AP+SIH+ GA+ GK GEWFGP+ +Q +
Sbjct: 263 GRDWRRGSKVQEES--ELVSLFADHPRAPFSIHRFVHHGATACGKCPGEWFGPSAASQCI 320
Query: 86 RKLAKYDDWSSIVFHVALDNT 106
+ L K + + + D +
Sbjct: 321 QALVKSNPQVGLRVCITSDGS 341
>gi|452837994|gb|EME39935.1| hypothetical protein DOTSEDRAFT_47435 [Dothistroma septosporum
NZE10]
Length = 442
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KE Y IL +F D +P SIH+ GA G GEWFGPN A+ +
Sbjct: 186 GRDWRRG--DKEREYKDILSLFADTPESPLSIHKFVEHGAQACGTYPGEWFGPNATARCI 243
Query: 86 RKLA-KYDDWSSIVFHVALDNTLVVNQV 112
R L KY + V+ D+ + V+ +
Sbjct: 244 RALTEKYHEAGLQVYSRPNDSDVYVDSL 271
>gi|296232881|ref|XP_002761778.1| PREDICTED: cysteine protease ATG4D [Callithrix jacchus]
Length = 474
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 208 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESSSEVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
++ +V+ D T+ V +L +A+ D +W+S+V V + N + V
Sbjct: 268 RLLVYVSQDCTVYKADVARL-------VARPDPSAEWNSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>gi|212545090|ref|XP_002152699.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
marneffei ATCC 18224]
gi|210065668|gb|EEA19762.1| autophagy cysteine endopeptidase Atg4, putative [Talaromyces
marneffei ATCC 18224]
Length = 489
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ ++ EE K+L +F D AP+SIH+ GA GK GEWFGP+ A +
Sbjct: 228 GRDWRRVSHTTEEN--KLLSLFADDPAAPFSIHRFVRHGALYCGKHPGEWFGPSATATCI 285
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNK 120
+ L++ + + +V+ D+T V K N+
Sbjct: 286 QALSEEYKVAGMNVYVSSDSTYVYEDKFKAVAYNQ 320
>gi|145245643|ref|XP_001395089.1| cysteine protease atg4 [Aspergillus niger CBS 513.88]
gi|166990612|sp|A2QY50.1|ATG4_ASPNC RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|134079795|emb|CAK40930.1| unnamed protein product [Aspergillus niger]
Length = 404
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ ++L +F D TAP+S+H+ GA S GK GEWFGP+ A+ +
Sbjct: 152 GRDWRRGARFEEES--QLLSLFADTPTAPFSVHRFVKHGAESCGKYPGEWFGPSATAKCI 209
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
L+ ++ +V+ D + V
Sbjct: 210 EALSSQCGNPTLKVYVSNDTSEV 232
>gi|431912280|gb|ELK14417.1| Cysteine protease ATG4B [Pteropus alecto]
Length = 431
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 25/111 (22%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASE--------------GKA 71
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G
Sbjct: 105 GRDWRWTQRKRQPDSYFSVLRAFMDRKDSYYSIHQIAPVHPQSRFWRQSASVRTSVLGPQ 164
Query: 72 VGEWFGPNTVAQVLR----------KLAKYDDWSSIVFHVALDNTLVVNQV 112
+ + F +++ R KLA +D WS++ H+A+DNT+V+ +
Sbjct: 165 LCQSFAAVRLSRRRRWELVTLSSPGKLAVFDTWSALAVHIAMDNTVVMEDI 215
>gi|170109871|ref|XP_001886142.1| hypothetical protein LACBIDRAFT_307494 [Laccaria bicolor S238N-H82]
gi|164639072|gb|EDR03346.1| hypothetical protein LACBIDRAFT_307494 [Laccaria bicolor S238N-H82]
Length = 1039
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + V + + A Y++I+ F D AP+S+H++AL G G VG+WFGP+
Sbjct: 419 GRDWRRPPYPVQTADYATYVQIVTWFLDTPAPEAPFSVHRMALAGKEFGTDVGQWFGPSV 478
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
A ++ L S + VA D TL + V
Sbjct: 479 AAGAIKTLVNSFPESGLGVSVATDGTLFQSDV 510
>gi|403356037|gb|EJY77606.1| Cysteine protease family C54 putative [Oxytricha trifallax]
gi|403376523|gb|EJY88241.1| Cysteine protease family C54 putative [Oxytricha trifallax]
Length = 480
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 34 VNSKEEAYLKILKMFEDR---RTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK 90
+ E YL +L++F+D + +PYSI IA G + G+W+GP ++ VL++L K
Sbjct: 213 ITEYREEYLNLLRLFQDNGEGQFSPYSIQNIAFQGLKIDRKPGDWYGPQAISIVLKRLTK 272
Query: 91 -YDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHV 136
Y +V L+ + +N +++ K DW+ VF V
Sbjct: 273 IYKPVKQFTMYVCLEGNIYLNVIQE----------KSKDWTQSVFIV 309
>gi|350631770|gb|EHA20141.1| hypothetical protein ASPNIDRAFT_178675 [Aspergillus niger ATCC
1015]
Length = 384
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ ++L +F D TAP+S+H+ GA S GK GEWFGP+ A+ +
Sbjct: 132 GRDWRRGARFEEES--QLLSLFADTPTAPFSVHRFVKHGAESCGKYPGEWFGPSATAKCI 189
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
L+ ++ +V+ D + V
Sbjct: 190 EALSSQCGNPTLKVYVSNDTSEV 212
>gi|71022117|ref|XP_761289.1| hypothetical protein UM05142.1 [Ustilago maydis 521]
gi|46097783|gb|EAK83016.1| hypothetical protein UM05142.1 [Ustilago maydis 521]
Length = 1541
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 7 KDQDFLIDWKGVTFEPSSFSGRDWQW-NVNSKEEAYLKILKMFEDRRT--APYSIHQIAL 63
+ DFL ++ + S +W ++ AY+KIL F D + P+ +H++A
Sbjct: 858 RQMDFLEQLASLSLDSSVEMQSLQEWREKRARHAAYIKILSWFLDDPSPACPFGVHRMAR 917
Query: 64 TGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVK 113
G GK VGEWFGP+T A +++L + I +A D +++V+
Sbjct: 918 EGKRLGKEVGEWFGPSTAAGAIKQLVTEFPDAGIAVELAHDGVFYLDEVR 967
>gi|392586633|gb|EIW75969.1| hypothetical protein CONPUDRAFT_111807 [Coniophora puteana
RWD-64-598 SS2]
Length = 1038
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRR--TAPYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + + +++ A Y++I+ F D AP+S+H++AL G GK VG+WFGP+T
Sbjct: 371 GRDWRRPPYPLYTEDYATYVQIITWFLDSPLPQAPFSVHRMALAGKDLGKDVGQWFGPST 430
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTL 107
A +++L + + + VA D L
Sbjct: 431 AAGAIKRLVQAFPDAGLGVAVASDGAL 457
>gi|225554849|gb|EEH03143.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 425
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KEE+ K+L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 198 GRDWRRGTKIKEES--KLLSLFADDPKAPFSIHRFVEHGASACGKYPGEWFGPSATARCI 255
>gi|432099562|gb|ELK28703.1| Cysteine protease ATG4D, partial [Myotis davidii]
Length = 392
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +HQ+ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 129 QEHWHRQIVSWFADHPQAPFGLHQLVELGQSWGKKAGDWYGPSLVAHILRKAVESCSEVT 188
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 189 RLVVYVSQDCTVYKADVARL-------VARPDCTAEWKSVVILVPVRLGGETLNPVYVPC 241
Query: 147 VKKL 150
VK+L
Sbjct: 242 VKEL 245
>gi|402219068|gb|EJT99143.1| hypothetical protein DACRYDRAFT_70366 [Dacryopinax sp. DJM-731 SS1]
Length = 1093
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 39 EAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
EAY+KIL F D + P+S+H++AL GA G+ VG+WFGP+ A ++KL
Sbjct: 490 EAYVKILVWFLDDPSIWCPFSVHRLALAGADMGREVGQWFGPSIAAGSIKKL 541
>gi|392574855|gb|EIW67990.1| hypothetical protein TREMEDRAFT_63874 [Tremella mesenterica DSM
1558]
Length = 1159
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 40 AYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSI 97
+Y++IL F D + P+S+H+IAL G GK VGEWFGP+T A L+ L S +
Sbjct: 634 SYVRILSWFLDDPSPLCPFSVHRIALIGKELGKEVGEWFGPSTAAGALKTLVNSFPPSGM 693
Query: 98 VFHVALDNTLVVNQV 112
A+D+ + + V
Sbjct: 694 AVATAVDSIVYKSDV 708
>gi|119195519|ref|XP_001248363.1| cysteine protease atg4 [Coccidioides immitis RS]
gi|303321428|ref|XP_003070708.1| cysteine protease atg4, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|121769827|sp|Q1E5M9.1|ATG4_COCIM RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|240110405|gb|EER28563.1| cysteine protease atg4, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320040173|gb|EFW22106.1| cysteine protease atg4 [Coccidioides posadasii str. Silveira]
gi|392862420|gb|EAS36938.2| cysteine protease atg4 [Coccidioides immitis RS]
Length = 432
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KEE ++L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 179 GRDWRRGSKIKEEC--ELLSLFADNPQAPFSIHRFVDYGASACGKHPGEWFGPSATARCI 236
Query: 86 RKLA 89
L+
Sbjct: 237 EALS 240
>gi|334326299|ref|XP_001366933.2| PREDICTED: cysteine protease ATG4D [Monodelphis domestica]
Length = 482
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+EE + +I+ F D+ AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 216 QEEQHRRIVSWFADQPGAPFGLHRLVELGRSSGKRAGDWYGPSVVAHILRKAVESSSEVA 275
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHV 136
+ +V+ D T+ V +L +A+ D +W S++ V
Sbjct: 276 QLEVYVSQDCTVYKADVAQL-------MAQPDPSTEWKSVIILV 312
>gi|330935035|ref|XP_003304808.1| hypothetical protein PTT_17484 [Pyrenophora teres f. teres 0-1]
gi|311318464|gb|EFQ87127.1| hypothetical protein PTT_17484 [Pyrenophora teres f. teres 0-1]
Length = 470
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW++ + + I+ MF D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRYQEQPDAKEHCDIVAMFADDPRAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L + + +V+ D V
Sbjct: 228 QDLVHKNKEVGLKVYVSGDGADV 250
>gi|358381369|gb|EHK19044.1| hypothetical protein TRIVIDRAFT_181799 [Trichoderma virens Gv29-8]
Length = 451
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE +++ MF D APYSIH GA+ GK GEWFGP+ AQ +
Sbjct: 191 GRDWRRGKCQQEER--QLISMFADDPRAPYSIHNFVRHGATACGKFPGEWFGPSATAQCI 248
Query: 86 RKL 88
+ L
Sbjct: 249 QAL 251
>gi|426191859|gb|EKV41798.1| hypothetical protein AGABI2DRAFT_123279 [Agaricus bisporus var.
bisporus H97]
Length = 1261
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + V + + A Y++IL F D + AP+S+H++AL G G VG+WFGP+
Sbjct: 337 GRDWRKPPYPVYTSDYATYVQILTWFFDTPSPDAPFSVHRMALAGKEFGTDVGQWFGPSV 396
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTL 107
A +++L S + VA D L
Sbjct: 397 AAGAVKRLVNEFPRSGVGVSVAKDGVL 423
>gi|449551395|gb|EMD42359.1| ATG4-like protein [Ceriporiopsis subvermispora B]
Length = 988
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + + + + A Y++IL F D + P+S+H++AL G GK VG+WFGP+T
Sbjct: 388 GRDWRRPPYPICTADYATYVQILTWFFDNPSPLCPFSVHRMALVGKELGKEVGQWFGPST 447
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
A ++ L + + VA D+ + + V +N
Sbjct: 448 AAGAIKTLVHAFPEAGLGVSVATDSVIYQSDVYTASRSN 486
>gi|354475125|ref|XP_003499780.1| PREDICTED: cysteine protease ATG4D [Cricetulus griseus]
gi|344240088|gb|EGV96191.1| Cysteine protease ATG4D [Cricetulus griseus]
Length = 474
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + K + +V
Sbjct: 212 HRRIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSVVAHILRKAVEKCSEVPRLVV 271
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 272 YVSQDCTVYKADVARLVSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 324
>gi|425784144|gb|EKV21938.1| Autophagy cysteine endopeptidase Atg4, putative [Penicillium
digitatum Pd1]
Length = 208
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ KEE K++ MF D AP+SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 142 GRDWR--RGEKEEEESKLISMFADHPEAPFSIHKFVNRGAESCGKYPGEWFGPSATAKCI 199
Query: 86 RKL 88
+ +
Sbjct: 200 QSV 202
>gi|449303631|gb|EMC99638.1| hypothetical protein BAUCODRAFT_344306 [Baudoinia compniacensis
UAMH 10762]
Length = 446
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KE+ Y ++ +F D AP+SIH+ GA GK GEWFGP+ A+ +
Sbjct: 187 GRDWR--RGQKEDDYKHLISLFADTPEAPFSIHKFVEHGAQACGKHPGEWFGPSATARSV 244
Query: 86 RKLA-KYDDWSSIVFHVALDNTLVVNQV 112
+ L KY D V+ D + V+ +
Sbjct: 245 QALTEKYRDVGLRVYARPDDGDVYVDSL 272
>gi|255945233|ref|XP_002563384.1| Pc20g08610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|166990617|sp|A7KAL5.1|ATG4_PENCW RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|129561973|gb|ABO31075.1| Atg4p [Penicillium chrysogenum]
gi|211588119|emb|CAP86190.1| Pc20g08610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 401
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ K++ MF D AP+SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 145 GRDWRRGEKVEEES--KLISMFADHPEAPFSIHRFVNRGAESCGKYPGEWFGPSATAKCI 202
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ + + ++ D + V
Sbjct: 203 QLLSTQSEVPQLRVYLTNDTSDV 225
>gi|409077121|gb|EKM77488.1| hypothetical protein AGABI1DRAFT_108018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1355
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + V + + A Y++IL F D + AP+S+H++AL G G VG+WFGP+
Sbjct: 424 GRDWRKPPYPVYTSDYATYVQILTWFFDTPSPDAPFSVHRMALAGKEFGTDVGQWFGPSV 483
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTL 107
A +++L S + VA D L
Sbjct: 484 AAGAVKRLVNEFPRSGVGVSVAKDGVL 510
>gi|405119256|gb|AFR94029.1| peptidase family C54 protein [Cryptococcus neoformans var. grubii
H99]
Length = 1185
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 14 DWKGVTFEPSSFS-GRDWQWNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEG 69
DW+ V P+SFS Q K+ A Y ++L F D + P+S+H++AL G G
Sbjct: 589 DWR-VPSTPASFSEATTNQETAALKDYAKYAQMLSWFLDDPSPLCPFSVHRMALIGKELG 647
Query: 70 KAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
K VGEWFGP+T A L+ LA + A D+ + + V DDW
Sbjct: 648 KEVGEWFGPSTAAGALKTLANSFAPCGVAVATATDSIIYKSDVYTASNLPS------DDW 701
Query: 130 SSI 132
+SI
Sbjct: 702 NSI 704
>gi|178057055|ref|NP_001116551.1| cysteine protease ATG4D [Sus scrofa]
gi|61211337|sp|Q684M2.1|ATG4D_PIG RecName: Full=Cysteine protease ATG4D; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related protein 4 homolog D
gi|51870495|emb|CAG15153.1| AUT-like 4, cysteine endopeptidase [Sus scrofa]
Length = 469
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 203 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 262
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W ++V V + N + V
Sbjct: 263 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKAVVILVPVRLGGETLNPVYVPC 315
Query: 147 VKKL 150
VK+L
Sbjct: 316 VKEL 319
>gi|327264155|ref|XP_003216881.1| PREDICTED: cysteine protease ATG4D-like [Anolis carolinensis]
Length = 585
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK-YDDWS 95
KE + KI+ F DR A + IH++ G S GK G+W+GP+ A ++RK +
Sbjct: 313 KERYHRKIISWFADRPQAHFGIHRLVSLGHSSGKKAGDWYGPSVAAHIIRKAVDCCSEAG 372
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD---WSSIVFHVAL 138
++V +V+ D T+ V L ++ + A +D W +++ V +
Sbjct: 373 NLVVYVSQDCTVYKGDVANLANKSEDRTA-WDPGAVWKAVIILVPM 417
>gi|295657177|ref|XP_002789160.1| autophagy-related protein 4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284504|gb|EEH40070.1| autophagy-related protein 4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 601
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +E+ L L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 310 GRDWRRGTKTDQESNL--LSLFADDPKAPFSIHRFVEYGASACGKYPGEWFGPSATARCI 367
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ + + +V D + V
Sbjct: 368 QALSSECKHAGLNVYVTSDGSDV 390
>gi|301104974|ref|XP_002901571.1| cysteine protease family C54, putative [Phytophthora infestans
T30-4]
gi|262100575|gb|EEY58627.1| cysteine protease family C54, putative [Phytophthora infestans
T30-4]
Length = 392
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 27 GRDWQW------NVNSK-EEAYLKILKMFEDRRTAP--YSIHQIALTGASEGKAVGEWFG 77
GRDW+ ++++ E Y+++L+ F D YSIHQ+ G K GEW+G
Sbjct: 92 GRDWRLPALFETEIDARLPETYVQLLRWFADSPDVECRYSIHQMVKLGVQYDKLPGEWYG 151
Query: 78 PNTVAQVLRKLA---KYDDWSSIVFHVALDNTLVVNQVKKLC----TTNKRKLAKYDDWS 130
P T AQVLR L + + + +V + + + V KLC + DWS
Sbjct: 152 PTTAAQVLRDLVNLHRREFGGELSMYVPQEGVVYSDDVAKLCFFDPLLHPPTTEDKSDWS 211
Query: 131 SIVFHVALDNTLVVNQVKKLCTTNKRYI 158
+ + + + L ++QV N+RY+
Sbjct: 212 TALL-ILIPLRLGLDQV------NERYV 232
>gi|336381646|gb|EGO22797.1| cysteine protease required for autophagy [Serpula lacrymans var.
lacrymans S7.9]
Length = 992
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + V++ + A Y++I+ F D + +P+S+H++AL G GK VG+WFGP+T
Sbjct: 383 GRDWRRPPYPVHTTDYATYVQIITWFFDTPSPQSPFSVHRMALAGKDLGKDVGQWFGPST 442
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
A ++ L + + VA D + + V
Sbjct: 443 AAGAIKTLVHAFPEAGLGVSVASDGVIFQSDV 474
>gi|126723748|ref|NP_001075911.1| cysteine protease ATG4C [Bos taurus]
gi|126010621|gb|AAI33599.1| ATG4C protein [Bos taurus]
Length = 458
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIAYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLKGITI 258
Query: 100 HVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 259 YVAQDCTVYSSDVIDKQCTS 278
>gi|449508713|ref|XP_002198788.2| PREDICTED: cysteine protease ATG4C [Taeniopygia guttata]
Length = 456
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 28 RDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
RDW E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK
Sbjct: 181 RDWDGTEKRNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKMAGDWYGPAVVAHILRK 240
Query: 88 L---AKYDDWSSIVFHVALDNTLVVNQV 112
A+ + + +VA D T+ + V
Sbjct: 241 AVEEARDPELQGVTVYVAQDCTVYSSDV 268
>gi|296489147|tpg|DAA31260.1| TPA: APG4 autophagy 4 homolog C [Bos taurus]
Length = 458
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLKGITI 258
Query: 100 HVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 259 YVAQDCTVYSSDVIDKQCTS 278
>gi|149642765|ref|NP_001092616.1| cysteine protease ATG4D [Bos taurus]
gi|148744285|gb|AAI42400.1| ATG4D protein [Bos taurus]
Length = 472
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G GK G+W+GP+ VA +LRK + + +
Sbjct: 206 QERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKKAGDWYGPSLVAHILRKAVESCSEVT 265
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 266 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 318
Query: 147 VKKL 150
VK+L
Sbjct: 319 VKEL 322
>gi|296485832|tpg|DAA27947.1| TPA: APG4 autophagy 4 homolog D [Bos taurus]
Length = 472
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G GK G+W+GP+ VA +LRK + + +
Sbjct: 206 QERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKKAGDWYGPSLVAHILRKAVESCSEVT 265
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 266 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 318
Query: 147 VKKL 150
VK+L
Sbjct: 319 VKEL 322
>gi|238506146|ref|XP_002384275.1| autophagy cysteine endopeptidase Atg4, putative [Aspergillus flavus
NRRL3357]
gi|220690389|gb|EED46739.1| autophagy cysteine endopeptidase Atg4, putative [Aspergillus flavus
NRRL3357]
Length = 439
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ ++EEA ++L +F D AP SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 186 GRDWRRGDKAEEEA--RLLSLFADHPDAPLSIHRFVKYGAESCGKHPGEWFGPSATARCI 243
Query: 86 RKLA 89
L+
Sbjct: 244 EALS 247
>gi|29135261|ref|NP_705811.8| cysteine protease ATG4D [Mus musculus]
gi|61211815|sp|Q8BGV9.1|ATG4D_MOUSE RecName: Full=Cysteine protease ATG4D; AltName: Full=AUT-like 4
cysteine endopeptidase; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related cysteine endopeptidase
4; AltName: Full=Autophagy-related protein 4 homolog D
gi|26331508|dbj|BAC29484.1| unnamed protein product [Mus musculus]
gi|26348941|dbj|BAC38110.1| unnamed protein product [Mus musculus]
gi|27763977|emb|CAC85952.1| APG4-D protein [Mus musculus]
gi|47125055|gb|AAH69851.1| Autophagy-related 4D (yeast) [Mus musculus]
gi|148693226|gb|EDL25173.1| autophagy-related 4D (yeast), isoform CRA_b [Mus musculus]
Length = 474
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V
Sbjct: 212 HRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVV 271
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 272 YVSQDCTVYKADVARLLSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 324
>gi|26349259|dbj|BAC38269.1| unnamed protein product [Mus musculus]
Length = 474
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V
Sbjct: 212 HRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVV 271
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 272 YVSQDCTVYKADVARLLSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 324
>gi|22658287|gb|AAH30861.1| Autophagy-related 4D (yeast) [Mus musculus]
gi|74152222|dbj|BAE32395.1| unnamed protein product [Mus musculus]
Length = 474
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V
Sbjct: 212 HRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVV 271
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 272 YVSQDCTVYKADVARLLSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 324
>gi|444525500|gb|ELV14047.1| Cysteine protease ATG4D [Tupaia chinensis]
Length = 431
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 22 PSSFSG----RDWQWNVNS----KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVG 73
PS + G R +W + +E + +I+ F D AP+ +H++ G S GK G
Sbjct: 161 PSRYHGPAHWRPPRWAQGTPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAG 220
Query: 74 EWFGPNTVAQVLRK-LAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DW 129
+W+GP+ VA +LRK + + + +V +V+ D T+ V +L +A+ D +W
Sbjct: 221 DWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVVRL-------VARPDPAAEW 273
Query: 130 SSIVFHVAL 138
S+V V +
Sbjct: 274 KSVVILVPV 282
>gi|83773128|dbj|BAE63255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|325504923|dbj|BAJ83603.1| cysteine protease Atg4 [Aspergillus oryzae]
Length = 356
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ ++EEA ++L +F D AP SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 104 GRDWRRGDKAEEEA--RLLSLFADHPDAPLSIHRFVKYGAESCGKHPGEWFGPSATARCI 161
Query: 86 RKLA 89
L+
Sbjct: 162 EALS 165
>gi|225685095|gb|EEH23379.1| peptidase family C54 [Paracoccidioides brasiliensis Pb03]
Length = 508
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +E+ L L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 219 GRDWRRGTKTDQESNL--LSLFADDPKAPFSIHRFVEYGASACGKYPGEWFGPSATARCI 276
Query: 86 RKLA 89
+ L+
Sbjct: 277 QALS 280
>gi|148693225|gb|EDL25172.1| autophagy-related 4D (yeast), isoform CRA_a [Mus musculus]
Length = 296
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVFHV 101
+I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V +V
Sbjct: 36 RIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVVYV 95
Query: 102 ALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 96 SQDCTVYKADVARLLSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 146
>gi|391868733|gb|EIT77943.1| cysteine protease required for autophagy - Apg4p/Aut2p [Aspergillus
oryzae 3.042]
Length = 357
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ ++EEA ++L +F D AP SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 104 GRDWRRGDKAEEEA--RLLSLFADHPDAPLSIHRFVKYGAESCGKHPGEWFGPSATARCI 161
Query: 86 RKLA 89
L+
Sbjct: 162 EALS 165
>gi|226294409|gb|EEH49829.1| cysteine protease atg4 [Paracoccidioides brasiliensis Pb18]
Length = 513
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +E+ L L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 224 GRDWRRGTKTDQESNL--LSLFADDPKAPFSIHRFVEYGASACGKYPGEWFGPSATARCI 281
Query: 86 RKLA 89
+ L+
Sbjct: 282 QALS 285
>gi|73956170|ref|XP_852273.1| PREDICTED: cysteine protease ATG4C isoform 2 [Canis lupus
familiaris]
gi|73956176|ref|XP_865426.1| PREDICTED: cysteine protease ATG4C isoform 4 [Canis lupus
familiaris]
Length = 458
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSI 97
+ KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 197 HRKIISWFGDSPLALFGLHQLIKYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGI 256
Query: 98 VFHVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 257 TIYVAQDCTVYSSDVIDKQCTS 278
>gi|355669957|gb|AER94693.1| ATG4 autophagy related 4-like protein C [Mustela putorius furo]
Length = 396
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSI 97
+ KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 135 HRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGI 194
Query: 98 VFHVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 195 TIYVAQDCTVYSSDVIDKQCTS 216
>gi|343428793|emb|CBQ72338.1| related to ATG4-essential for autophagy [Sporisorium reilianum
SRZ2]
Length = 1505
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 10 DFLIDWKGVTFEPSSFSGRDWQW-NVNSKEEAYLKILKMFEDRRT--APYSIHQIALTGA 66
+FL + ++ + S+ +W ++ Y+KIL F D + P+ +H++A G
Sbjct: 826 EFLQELANLSLDTSAEKQSLLEWRQKRARHSTYIKILSWFLDDPSPACPFGVHRMAREGK 885
Query: 67 SEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAK 125
GK VGEWFGP+T A +++L + + +A D +++V+ + R+L K
Sbjct: 886 RLGKEVGEWFGPSTAAGAIKQLVSEFPDAGLAVELAHDGVFYLDEVRAAAGAS-RQLGK 943
>gi|168010849|ref|XP_001758116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690572|gb|EDQ76938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 25 FSGRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
+ GR W+ +AYL+IL+ F D + P+SIH + G G A G W GP + +
Sbjct: 101 YLGRSWRREPGQPCSQAYLQILQTFGDSESCPFSIHNLLEAGHPFGLAAGSWLGPYALCR 160
Query: 84 VLRKLAKYD 92
L LA+ D
Sbjct: 161 TLEALARAD 169
>gi|317151014|ref|XP_001824388.2| cysteine protease atg4 [Aspergillus oryzae RIB40]
Length = 402
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ ++EEA ++L +F D AP SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 150 GRDWRRGDKAEEEA--RLLSLFADHPDAPLSIHRFVKYGAESCGKHPGEWFGPSATARCI 207
Query: 86 RKLA 89
L+
Sbjct: 208 EALS 211
>gi|166990665|sp|Q2U5B0.2|ATG4_ASPOR RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
Length = 407
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ ++EEA ++L +F D AP SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 155 GRDWRRGDKAEEEA--RLLSLFADHPDAPLSIHRFVKYGAESCGKHPGEWFGPSATARCI 212
Query: 86 RKLA 89
L+
Sbjct: 213 EALS 216
>gi|410967384|ref|XP_003990200.1| PREDICTED: cysteine protease ATG4C [Felis catus]
Length = 459
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 259 YVAQDCTVYSSDVIDKQCTS 278
>gi|440902657|gb|ELR53425.1| Cysteine protease ATG4C [Bos grunniens mutus]
Length = 458
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EIHHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV-KKLCTT 118
I +VA D T+ + V K CT+
Sbjct: 254 KGITIYVAQDCTVYSSDVIDKQCTS 278
>gi|426215654|ref|XP_004002085.1| PREDICTED: cysteine protease ATG4C isoform 1 [Ovis aries]
gi|426215656|ref|XP_004002086.1| PREDICTED: cysteine protease ATG4C isoform 2 [Ovis aries]
Length = 458
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLKGITI 258
Query: 100 HVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 259 YVAQDCTVYSSDVIDKQCTS 278
>gi|156042330|ref|XP_001587722.1| hypothetical protein SS1G_10962 [Sclerotinia sclerotiorum 1980]
gi|154695349|gb|EDN95087.1| hypothetical protein SS1G_10962 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 414
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 12 LIDWKGVTFEPSSFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GK 70
L+D G T D W +S E KIL +F D APYSIH+ GAS GK
Sbjct: 144 LVDQGGFT--------SDTGWGCSSSNEER-KILSLFADDPRAPYSIHKFVEHGASACGK 194
Query: 71 AVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLV 108
GEWFGP+ A+ ++ L S + ++ D + V
Sbjct: 195 HPGEWFGPSAAARCIQALTNSQVESELRVYITGDGSDV 232
>gi|388581514|gb|EIM21822.1| hypothetical protein WALSEDRAFT_68740 [Wallemia sebi CBS 633.66]
Length = 603
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 27 GRDWQWNV------NSKEEAY---LKILKMFEDRRT--APYSIHQIALTGASEGKAVGEW 75
GR W+ N +K + Y +K+L +F D + +P+S+H++A+ G S GK VGEW
Sbjct: 143 GRQWRRNPFVDLTDYAKRKEYVNLIKLLNLFMDNPSTLSPFSVHRMAVVGKSLGKEVGEW 202
Query: 76 FGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
FGP+T A ++ L ++ VA D+ + + V
Sbjct: 203 FGPSTAALAIKHLVNNQTDINLSVSVASDSVIYKSDV 239
>gi|340931831|gb|EGS19364.1| cysteine protease-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 494
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ N K E +IL +F D APYS+H GA GK GEWFGP+ A+ +
Sbjct: 230 GREWRRGQNPKAER--EILSLFADDPRAPYSLHNFVKHGAEACGKFPGEWFGPSATARCI 287
Query: 86 RKLA 89
+ LA
Sbjct: 288 QALA 291
>gi|291398772|ref|XP_002715996.1| PREDICTED: APG4 autophagy 4 homolog C [Oryctolagus cuniculus]
Length = 458
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EICHRKIISWFGDSPLAAFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITVYVAQDCTVYSSDV 271
>gi|345564445|gb|EGX47408.1| hypothetical protein AOL_s00083g501 [Arthrobotrys oligospora ATCC
24927]
Length = 444
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQVL 85
GRDW+ + +EE + IL +F D AP+S+H G AS G GEWFGP+ A+ +
Sbjct: 181 GRDWRRGKSPQEEQH--ILSLFADDPRAPFSLHNFVKYGEASCGVYPGEWFGPSATARCI 238
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVAL 138
+ LA D V+ + + RK+A DD VFH L
Sbjct: 239 QALAAQHDEGLQVY--------ITGDGGDVYEDAFRKIAISDDG---VFHPTL 280
>gi|395323681|gb|EJF56143.1| hypothetical protein DICSQDRAFT_113447 [Dichomitus squalens
LYAD-421 SS1]
Length = 999
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 27 GRDWQWNVNSKEEA----YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + A Y++I+ F D + P+S+H++AL G GK VG+WFGP+T
Sbjct: 387 GRDWRRPPHPVYTADYAMYVQIVTWFLDTPSPLCPFSVHRMALVGKDLGKEVGQWFGPST 446
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
A ++ L + + VA D+TL + V
Sbjct: 447 AAGAIKTLVHSFPDAGLGVAVASDSTLYESDV 478
>gi|210032083|ref|NP_001094483.2| autophagy-related 4D [Rattus norvegicus]
gi|149020504|gb|EDL78309.1| rCG31864, isoform CRA_b [Rattus norvegicus]
Length = 473
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + + +V
Sbjct: 211 HRRIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSVVAHILRKAVESCSEVTRLVV 270
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 271 YVSQDCTVYKADVARLVSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 323
>gi|195539710|gb|AAI68141.1| Atg4d protein [Rattus norvegicus]
Length = 442
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + + +V
Sbjct: 180 HRRIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSVVAHILRKAVESCSEVTRLVV 239
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 240 YVSQDCTVYKADVARLVSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 292
>gi|440467300|gb|ELQ36530.1| cysteine protease atg4 [Magnaporthe oryzae Y34]
Length = 572
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ EE K+L +F D APYSIH GA++ GK GEWFGP+ A+ +
Sbjct: 306 GRSWRRGQAPDEER--KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCI 363
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 364 HALANATENSFRVY 377
>gi|358056752|dbj|GAA97415.1| hypothetical protein E5Q_04093 [Mixia osmundae IAM 14324]
Length = 1202
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 27 GRDWQWNVNSKEEA---------------YLKILKMFEDRRT--APYSIHQIALTGASEG 69
GRDW+ +S +E+ Y ++L F D + P+S+H+ A+ G +G
Sbjct: 623 GRDWRRTCSSSDESPDIPEESRSLEHFETYARLLTWFLDDPSPLCPFSVHRFAVVGKEQG 682
Query: 70 -KAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVK 113
K +GEWFGP+T A ++ LA +++ V++D T+ + V+
Sbjct: 683 GKEIGEWFGPSTAAGAIKHLASNFAPANLGVAVSVDGTVYRSDVQ 727
>gi|149020505|gb|EDL78310.1| rCG31864, isoform CRA_c [Rattus norvegicus]
Length = 337
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVFHV 101
+I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + + +V +V
Sbjct: 77 RIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSVVAHILRKAVESCSEVTRLVVYV 136
Query: 102 ALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 137 SQDCTVYKADVARLVSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 187
>gi|325184648|emb|CCA19140.1| cysteine protease family C54 putative [Albugo laibachii Nc14]
Length = 459
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 31 QWNVNSKEE------AYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNTVA 82
+W + ++ E Y+K+LK F D YSIH I G K GEW+GP T A
Sbjct: 149 KWKIPARSEDLELPKVYVKLLKWFVDSFDTECKYSIHNITRIGMQYDKLPGEWYGPTTAA 208
Query: 83 QVLRKL----AKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
Q LR L A+ ++V +V D + V +LC ++
Sbjct: 209 QALRDLVNLHAQESPECNLVMYVPQDGVVYTKDVNELCISH 249
>gi|440478911|gb|ELQ59709.1| cysteine protease atg4 [Magnaporthe oryzae P131]
Length = 572
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ EE K+L +F D APYSIH GA++ GK GEWFGP+ A+ +
Sbjct: 306 GRSWRRGQAPDEER--KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCI 363
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 364 HALANATENSFRVY 377
>gi|406698456|gb|EKD01693.1| hypothetical protein A1Q2_04064 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1295
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 15 WKGVTFEPSSFSGRDWQWNVNSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAV 72
W+ T +PS + Y+++L F D + P+S+H+ AL G GK V
Sbjct: 569 WRVPTQKPSVHPRTPLELAELEAYSTYVRVLSWFMDDPSPLCPFSVHRFALIGKELGKEV 628
Query: 73 GEWFGPNTVAQVLRKLA 89
GEWFGP+T A L+ LA
Sbjct: 629 GEWFGPSTAAGALKTLA 645
>gi|401886473|gb|EJT50506.1| hypothetical protein A1Q1_00204 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1295
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 15 WKGVTFEPSSFSGRDWQWNVNSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAV 72
W+ T +PS + Y+++L F D + P+S+H+ AL G GK V
Sbjct: 569 WRVPTQKPSVHPRTPLELAELEAYSTYVRVLSWFMDDPSPLCPFSVHRFALIGKELGKEV 628
Query: 73 GEWFGPNTVAQVLRKLA 89
GEWFGP+T A L+ LA
Sbjct: 629 GEWFGPSTAAGALKTLA 645
>gi|348550913|ref|XP_003461275.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D-like [Cavia
porcellus]
Length = 474
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 207 QELRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESSSEVT 266
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKK 149
+ +V+ D T+ V L + +W S+V V + N + V VK+
Sbjct: 267 RLAVYVSQDCTVYKADVAHLVASRD----PTAEWKSVVILVPVRLGGETLNPVYVPGVKE 322
Query: 150 L 150
L
Sbjct: 323 L 323
>gi|389637385|ref|XP_003716330.1| cysteine protease ATG4 [Magnaporthe oryzae 70-15]
gi|148887340|sp|Q523C3.2|ATG4_MAGO7 RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|351642149|gb|EHA50011.1| cysteine protease ATG4 [Magnaporthe oryzae 70-15]
Length = 491
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ EE K+L +F D APYSIH GA++ GK GEWFGP+ A+ +
Sbjct: 225 GRSWRRGQAPDEER--KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCI 282
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 283 HALANATENSFRVY 296
>gi|403413274|emb|CCL99974.1| predicted protein [Fibroporia radiculosa]
Length = 994
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + + + + A Y++I+ F D + P+S+H++AL G GK VG+WFGP+T
Sbjct: 392 GRDWRRPPYPIYTADFATYVQIISWFLDDPSPLCPFSVHRMALVGKELGKDVGQWFGPST 451
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
A ++ L + + VA+D + + V
Sbjct: 452 AAGAIKTLVHAFPEAGLGVSVAVDGVIYQSDV 483
>gi|392572178|gb|EIW65350.1| hypothetical protein TRAVEDRAFT_33890 [Trametes versicolor
FP-101664 SS1]
Length = 997
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 27 GRDWQWNVNSKEEA----YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + A Y++I+ F D + P+S+H++AL G GK VG+WFGP+T
Sbjct: 382 GRDWRRPPHPVYTADYATYVQIVTWFLDNPSPLCPFSVHRMALVGKDLGKDVGQWFGPST 441
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQV----KKLCTTNKRKLAKYDDWSSIVFHV 136
A ++ L +++ A+D TL + V + + + +R DW V
Sbjct: 442 AAGAIKTLVHAFPEATLGVANAVDGTLYESDVYAASRSVMYSTRRHGHARMDWGDRAVLV 501
Query: 137 ALD--------NTLVVNQVKKLCT 152
+ N L N +K L T
Sbjct: 502 LIGIRLGIEGVNPLYYNTIKTLYT 525
>gi|45185039|ref|NP_982756.1| ABL191Wp [Ashbya gossypii ATCC 10895]
gi|62899767|sp|Q75E61.1|ATG4_ASHGO RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|44980675|gb|AAS50580.1| ABL191Wp [Ashbya gossypii ATCC 10895]
gi|374105958|gb|AEY94868.1| FABL191Wp [Ashbya gossypii FDAG1]
Length = 521
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ + N+ E L+I+K FED P+S+H+ G S GK GEWFGP+ ++ +
Sbjct: 196 GRDFRIDDNAANEHELRIIKWFEDDPKYPFSLHKFVQEGFSLSGKKPGEWFGPSATSRSI 255
Query: 86 RKL-AKY 91
+ L AK+
Sbjct: 256 QALVAKF 262
>gi|258566559|ref|XP_002584024.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907725|gb|EEP82126.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 377
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +E + +L +F DR AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 166 GRDWRRGSETGKE--IALLSLFADRPQAPFSIHRFVEHGAAACGKHPGEWFGPSATARCI 223
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDD 128
+ H L N V + + R++A DD
Sbjct: 224 DECE----------HAGL-NVYVTSDGSDVHEDKFRQIAGLDD 255
>gi|440638438|gb|ELR08357.1| hypothetical protein GMDG_03152 [Geomyces destructans 20631-21]
Length = 448
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 28 RDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVLR 86
R W+ V +E +I+ +F D APYSIH+ GA GK G+WFGP+ A+ ++
Sbjct: 183 RGWRRGVGRDKE--REIVSLFADDPRAPYSIHKFVEHGAEACGKYPGQWFGPSATARCIQ 240
Query: 87 KLAKYDDWSSIVFHVALDNTLV 108
+LAK + + + ++ D + V
Sbjct: 241 ELAKRHESADVRVYITGDGSDV 262
>gi|210063823|gb|ACJ06587.1| ATG4 protein [Magnaporthe oryzae]
Length = 491
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ EE K+L +F D APYSIH GA++ GK GEWFGP+ A+ +
Sbjct: 225 GRSWRRGQAPDEER--KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCI 282
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 283 HALANATENSFRVY 296
>gi|403296347|ref|XP_003939073.1| PREDICTED: cysteine protease ATG4D [Saimiri boliviensis
boliviensis]
Length = 463
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 231 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESSSEVT 290
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD 127
+V +V+ D T K CT + ++L + +
Sbjct: 291 RLVVYVSQDCT-----GKGTCTPSLQELLRCE 317
>gi|74665877|sp|Q4U3V5.1|ATG4_CRYPA RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|66576169|gb|AAY51673.1| putative cysteine protease Atg4 [Cryphonectria parasitica]
Length = 459
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +++E +IL F D APYS+H GA + GK GEWFGP+ A+ +
Sbjct: 197 GRDWRRGKAARQER--EILARFADDPRAPYSLHNFVRHGAVACGKFPGEWFGPSATARCI 254
Query: 86 RKLAKYDDWSSIVFHVA 102
+ LA ++ S V+
Sbjct: 255 QALANSNESSLRVYSTG 271
>gi|296415785|ref|XP_002837566.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633439|emb|CAZ81757.1| unnamed protein product [Tuber melanosporum]
Length = 409
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ + +EE ++L +F D AP+SIH+ G E GK GEWFGP+ A +
Sbjct: 158 GRGWRRGMKPEEEK--RLLALFADDPRAPFSIHKFVRHGEVECGKNPGEWFGPSAAAMCI 215
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+ L + + + + N L +K+ N
Sbjct: 216 QALTHAYEPAGLRVYQTNSNDLYEEDFRKVAVVN 249
>gi|348586836|ref|XP_003479174.1| PREDICTED: cysteine protease ATG4C-like [Cavia porcellus]
Length = 435
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
++E Y KI+ F D +A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 170 RDEVYHRKIISWFGDSPSALFGLHQLIECGRRSGKKAGDWYGPAVVAHILRKAVEEARHP 229
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D I +VA D T+ + V
Sbjct: 230 DLQGITVYVAQDCTVYNSDV 249
>gi|299738612|ref|XP_001834660.2| cysteine protease [Coprinopsis cinerea okayama7#130]
gi|298403389|gb|EAU87108.2| cysteine protease [Coprinopsis cinerea okayama7#130]
Length = 1034
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 27 GRDWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + V + + A Y+ IL F D AP+S+H++AL G G VG+WFGP+
Sbjct: 385 GRDWRKPPYPVMTADYATYVHILTWFLDTPAPEAPFSVHRMALAGKELGTDVGQWFGPSV 444
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTL 107
A ++ L + I VA+D L
Sbjct: 445 AAGAIKALVNSFPEAGIGVAVAVDGVL 471
>gi|417401291|gb|JAA47536.1| Putative cysteine protease required for autophagy [Desmodus
rotundus]
Length = 458
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPVALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYSSDV 271
>gi|367047453|ref|XP_003654106.1| hypothetical protein THITE_2116815 [Thielavia terrestris NRRL 8126]
gi|347001369|gb|AEO67770.1| hypothetical protein THITE_2116815 [Thielavia terrestris NRRL 8126]
Length = 454
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +A +IL +F D APYS+H GA+ GK GEWFGP+ A+ +
Sbjct: 192 GRDWRRATDP--DAEREILSLFADDPRAPYSLHNFVKHGAAACGKYPGEWFGPSATARCI 249
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 250 EALANQHESSLRVY 263
>gi|395750455|ref|XP_002828707.2| PREDICTED: cysteine protease ATG4D [Pongo abelii]
Length = 296
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 50 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 109
Query: 96 SIVFHVALDNTLV 108
+V +V+ D T++
Sbjct: 110 RLVVYVSQDCTVL 122
>gi|443730776|gb|ELU16134.1| hypothetical protein CAPTEDRAFT_228011 [Capitella teleta]
Length = 450
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 25 FSGRDW---QWNVNSKEEA-YLKILKMFED--RRTAPYSIHQIALTGASEGKAVGEWFGP 78
+ GRDW N KE + +I+++F D +P+SI + G GK G+W+GP
Sbjct: 166 YLGRDWTIHHTQQNRKETMLHRQIIRLFGDFPGNDSPFSIQALVRIGVDHGKRPGDWYGP 225
Query: 79 NTVAQVLR-KLAKYDDW----SSIVFHVALDNTLVVNQVKKLCTTN 119
+VA V+R + + D+ S + +VA D T+ + V LCT +
Sbjct: 226 ASVAYVVRDAINQVPDFHPLLSQVCVYVAPDCTVYIQDVIDLCTQH 271
>gi|441628985|ref|XP_004093160.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D [Nomascus
leucogenys]
Length = 441
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 175 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 234
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ ++ V +L +A+ D +W S+V V + N + V
Sbjct: 235 RLVVYVSQTCSMYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 287
Query: 147 VKKL 150
VK+L
Sbjct: 288 VKEL 291
>gi|355703136|gb|EHH29627.1| Cysteine protease ATG4D [Macaca mulatta]
Length = 511
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 251 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 310
Query: 96 SIVFHVALDNT 106
+V +V+ D T
Sbjct: 311 RLVVYVSQDCT 321
>gi|443893810|dbj|GAC71266.1| cysteine protease [Pseudozyma antarctica T-34]
Length = 1509
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 5 SPKDQ-DFLIDWKGVTFEPSSFSGRDWQW-NVNSKEEAYLKILKMFEDRRT--APYSIHQ 60
+PK Q +F + + + S+ + W ++ Y++IL F D + P+ +H+
Sbjct: 811 APKSQIEFFEELANASLDASAENQSLASWRERRARHATYIRILSWFLDDPSPACPFGVHR 870
Query: 61 IALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNK 120
+A G GK VGEWFGP+T A +++L + I +A D +++V+ + +
Sbjct: 871 MAREGKRLGKEVGEWFGPSTAAGAIKQLVFDFPEAGIAVELAHDGVFYLDEVRAAASAST 930
Query: 121 RK 122
K
Sbjct: 931 GK 932
>gi|301764643|ref|XP_002917740.1| PREDICTED: cysteine protease ATG4C-like [Ailuropoda melanoleuca]
gi|281350282|gb|EFB25866.1| hypothetical protein PANDA_006093 [Ailuropoda melanoleuca]
Length = 458
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK ++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEETRHPDLQGITI 258
Query: 100 HVALDNTLVVNQV-KKLCTT 118
+VA D T+ + V K CT+
Sbjct: 259 YVAQDCTVYSSDVIDKQCTS 278
>gi|389750681|gb|EIM91754.1| hypothetical protein STEHIDRAFT_88418 [Stereum hirsutum FP-91666
SS1]
Length = 1286
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 27 GRDWQWNVNSKEEA----YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + A Y+++L F D T P+S+H++AL G GK VG+WFGP+T
Sbjct: 427 GRDWRRPPHPVYTADYATYVQMLTWFFDSPTPHCPFSVHRMALAGKELGKDVGQWFGPST 486
Query: 81 VAQVLRKL 88
A ++ L
Sbjct: 487 AAGAIKTL 494
>gi|149709514|ref|XP_001500964.1| PREDICTED: cysteine protease ATG4C [Equus caballus]
Length = 458
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYSSDV 271
>gi|126305934|ref|XP_001364974.1| PREDICTED: cysteine protease ATG4C [Monodelphis domestica]
Length = 460
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 196 ELCHRKIISWFGDSPLACFGLHQLIEYGKKSGKTAGDWYGPAVVAHILRKAVEEARHPDL 255
Query: 95 SSIVFHVALDNTL 107
I +VA D T+
Sbjct: 256 QGITIYVAQDCTV 268
>gi|442757637|gb|JAA70977.1| Putative cysteine protease required for autophagy [Ixodes ricinus]
Length = 458
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYSSDV 271
>gi|346975631|gb|EGY19083.1| peptidase family C54 protein [Verticillium dahliae VdLs.17]
Length = 449
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ V +++E ++L F D APYSIH+ GA + GK GEWFGP+ A+ +
Sbjct: 188 GRDWRRGVAAEKER--QLLSKFADDPKAPYSIHRFVQHGAVACGKYPGEWFGPSATARCI 245
Query: 86 RKL 88
+ L
Sbjct: 246 QAL 248
>gi|444726263|gb|ELW66801.1| Cysteine protease ATG4C [Tupaia chinensis]
Length = 378
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSI 97
+ KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 169 HRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGI 228
Query: 98 VFHVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 229 TIYVAQDCTVYSSDV 243
>gi|335774946|gb|AEH58408.1| cysteine protease ATG4C-like protein, partial [Equus caballus]
Length = 400
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 141 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 200
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 201 YVAQDCTVYSSDV 213
>gi|393219109|gb|EJD04597.1| hypothetical protein FOMMEDRAFT_133827 [Fomitiporia mediterranea
MF3/22]
Length = 1147
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 27 GRDW----QWNVNSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW Q Y+KIL F D P+S+H++AL G GK VG+WFGP+T
Sbjct: 426 GRDWRRPPQPVYTVDYATYVKILTWFFDSTDIHCPFSVHRMALAGKDLGKDVGQWFGPST 485
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
A ++ + + + VA D VV + L +N
Sbjct: 486 AAGAIKTVVHAFAEAGLGVSVATDG--VVYETDVLAASN 522
>gi|403257906|ref|XP_003921531.1| PREDICTED: cysteine protease ATG4C [Saimiri boliviensis
boliviensis]
Length = 458
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EMYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>gi|390344344|ref|XP_786847.3| PREDICTED: uncharacterized protein LOC581768 [Strongylocentrotus
purpuratus]
Length = 1018
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 25 FSGRDWQ-WNVNSKE--EAYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPN 79
F GR+W + ++E + + +I++ F D+ +P+S+H++ G + GK VG+W+GP+
Sbjct: 428 FLGREWNIYKPQTQEMLQFHRQIVRWFGDQPLDMSPFSVHRLVGIGQNNGKKVGDWYGPS 487
Query: 80 TVAQVLRKLAKYDD-----WSSIVFHVALDNTLVVNQVKKLCTTNKRK 122
+VA +L++ + +VA D T+ V LC + +K
Sbjct: 488 SVAHILKEAMDSAHELNPLLGEVCIYVAQDCTVYKQDVIDLCRSKSKK 535
>gi|390594065|gb|EIN03481.1| hypothetical protein PUNSTDRAFT_56214 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1093
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 27 GRDWQWNVNSKEEA----YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + A Y+++L F D + P+S+H++AL G GK VG+WFGP+T
Sbjct: 459 GRDWRRPSYPQPTAAYASYVQLLTWFFDSPSPLCPFSVHRMALAGKELGKDVGQWFGPST 518
Query: 81 VAQVLRKL 88
A ++ L
Sbjct: 519 AAGAIKTL 526
>gi|395840680|ref|XP_003793181.1| PREDICTED: cysteine protease ATG4C [Otolemur garnettii]
Length = 457
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK AK+ D I
Sbjct: 199 KIVSWFGDSPLAFFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEAKHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYNSDV 271
>gi|320581937|gb|EFW96156.1| cysteine protease ATG4, putative [Ogataea parapolymorpha DL-1]
Length = 509
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GR W+++ + + +I+ F D TAP+SIH GA+ GK GEWFGP+ A+ +
Sbjct: 149 GRGWRYDQTRECAKHAEIVSWFVDIPTAPFSIHNFVEQGANCAGKKPGEWFGPSAAARSI 208
Query: 86 RKL--AKYDDWSSIVFHVA 102
+ L A YD V+ A
Sbjct: 209 QVLCEANYDKIGLKVYFTA 227
>gi|353227348|emb|CCA77858.1| hypothetical protein PIIN_00505 [Piriformospora indica DSM 11827]
Length = 1257
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 41 YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIV 98
Y++IL F D + AP+ IH++AL G GK VG WFGP+T A +++L + + +
Sbjct: 426 YVRILTWFLDNPSPLAPFGIHRMALAGKELGKEVGSWFGPSTAAGAIKRLVGEFEDAGLE 485
Query: 99 FHVALDNTLVVNQV 112
+A+D+ + + V
Sbjct: 486 VALAVDSVVYQSDV 499
>gi|116283594|gb|AAH18678.1| ATG4C protein [Homo sapiens]
Length = 451
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>gi|14042698|dbj|BAB55356.1| unnamed protein product [Homo sapiens]
Length = 446
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>gi|297820846|ref|XP_002878306.1| autophagy 4b [Arabidopsis lyrata subsp. lyrata]
gi|297324144|gb|EFH54565.1| autophagy 4b [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + E YL+IL++F D + +SIH + L G S G A G W GP V +
Sbjct: 191 GRSWRKKDSEPPNEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSW 250
Query: 86 RKLAKYDDWSSIVFH 100
LA+ + + V H
Sbjct: 251 ESLARKNKEETDVKH 265
>gi|15232213|ref|NP_191554.1| cysteine protease ATG4b [Arabidopsis thaliana]
gi|75182325|sp|Q9M1Y0.1|ATG4B_ARATH RecName: Full=Cysteine protease ATG4b; AltName:
Full=Autophagy-related protein 4 homolog b;
Short=AtAPG4b; Short=Protein autophagy 4b
gi|7019689|emb|CAB75814.1| putative protein [Arabidopsis thaliana]
gi|19912145|dbj|BAB88384.1| autophagy 4b [Arabidopsis thaliana]
gi|110742150|dbj|BAE99003.1| hypothetical protein [Arabidopsis thaliana]
gi|332646468|gb|AEE79989.1| cysteine protease ATG4b [Arabidopsis thaliana]
Length = 477
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + +E YL+IL++F D + +SIH + L G S G A G W GP V +
Sbjct: 192 GRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSW 251
Query: 86 RKLAK 90
LA+
Sbjct: 252 ESLAR 256
>gi|397475554|ref|XP_003809200.1| PREDICTED: cysteine protease ATG4C isoform 1 [Pan paniscus]
gi|397475556|ref|XP_003809201.1| PREDICTED: cysteine protease ATG4C isoform 2 [Pan paniscus]
Length = 458
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>gi|30410844|ref|NP_116241.2| cysteine protease ATG4C [Homo sapiens]
gi|30410846|ref|NP_835739.1| cysteine protease ATG4C [Homo sapiens]
gi|114556947|ref|XP_001159883.1| PREDICTED: cysteine protease ATG4C isoform 4 [Pan troglodytes]
gi|114556951|ref|XP_001159976.1| PREDICTED: cysteine protease ATG4C isoform 6 [Pan troglodytes]
gi|61211867|sp|Q96DT6.1|ATG4C_HUMAN RecName: Full=Cysteine protease ATG4C; AltName: Full=AUT-like 3
cysteine endopeptidase; AltName: Full=Autophagin-3;
AltName: Full=Autophagy-related cysteine endopeptidase
3; AltName: Full=Autophagy-related protein 4 homolog C
gi|14625875|emb|CAC43939.1| putative autophagy-related cysteine endopeptidase [Homo sapiens]
gi|21542522|gb|AAH33024.1| ATG4 autophagy related 4 homolog C (S. cerevisiae) [Homo sapiens]
gi|27763973|emb|CAC85556.1| Apg4-C protein [Homo sapiens]
gi|119626984|gb|EAX06579.1| ATG4 autophagy related 4 homolog C (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119626985|gb|EAX06580.1| ATG4 autophagy related 4 homolog C (S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|123983334|gb|ABM83408.1| ATG4 autophagy related 4 homolog C (S. cerevisiae) [synthetic
construct]
gi|123998035|gb|ABM86619.1| ATG4 autophagy related 4 homolog C (S. cerevisiae) [synthetic
construct]
gi|410220598|gb|JAA07518.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410220600|gb|JAA07519.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410267918|gb|JAA21925.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410291226|gb|JAA24213.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410291228|gb|JAA24214.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410335203|gb|JAA36548.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
gi|410335205|gb|JAA36549.1| ATG4 autophagy related 4 homolog C [Pan troglodytes]
Length = 458
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>gi|297664749|ref|XP_002810790.1| PREDICTED: cysteine protease ATG4C [Pongo abelii]
Length = 458
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYNSDV 271
>gi|405953478|gb|EKC21133.1| Leucine-rich repeat-containing protein 6 [Crassostrea gigas]
Length = 1114
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 31 QWNVNS----KEEAYLK-ILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
+WNV S ++E Y K I++ F D +P+S+H++ G + GK GEWFGP +VA
Sbjct: 315 EWNVFSDQTREQETYRKQIIRWFGDYLCDESPFSMHRLVEVGKNLGKQPGEWFGPASVAH 374
Query: 84 VLRKLAKYDD-----WSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKY 126
+L++ S + +V+ D T+ + +LC T R K+
Sbjct: 375 ILKETMVKGQKTQTVLSDLCVYVSQDCTVYKQDIYELCCTRPRADTKF 422
>gi|402854773|ref|XP_003892029.1| PREDICTED: cysteine protease ATG4C isoform 1 [Papio anubis]
gi|402854775|ref|XP_003892030.1| PREDICTED: cysteine protease ATG4C isoform 2 [Papio anubis]
Length = 458
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTL 107
+VA D T+
Sbjct: 259 YVAQDCTV 266
>gi|426336111|ref|XP_004029547.1| PREDICTED: uncharacterized protein LOC101129491 [Gorilla gorilla
gorilla]
Length = 351
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 50 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 109
Query: 96 SIVFHVALDNT 106
+V +V+ D T
Sbjct: 110 RLVVYVSQDCT 120
>gi|383872484|ref|NP_001244816.1| cysteine protease ATG4C [Macaca mulatta]
gi|355745338|gb|EHH49963.1| hypothetical protein EGM_00712 [Macaca fascicularis]
gi|380788509|gb|AFE66130.1| cysteine protease ATG4C isoform 8 [Macaca mulatta]
gi|383413101|gb|AFH29764.1| cysteine protease ATG4C isoform 8 [Macaca mulatta]
Length = 458
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTL 107
+VA D T+
Sbjct: 259 YVAQDCTV 266
>gi|79597805|ref|NP_850722.3| cysteine protease ATG4b [Arabidopsis thaliana]
gi|332646467|gb|AEE79988.1| cysteine protease ATG4b [Arabidopsis thaliana]
Length = 360
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + +E YL+IL++F D + +SIH + L G S G A G W GP V +
Sbjct: 192 GRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSW 251
Query: 86 RKLAK 90
LA+
Sbjct: 252 ESLAR 256
>gi|189091768|ref|XP_001929717.1| hypothetical protein [Podospora anserina S mat+]
gi|188219237|emb|CAP49217.1| unnamed protein product [Podospora anserina S mat+]
Length = 508
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 24 SFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVA 82
S +GR W+ N E +I+ +F D APYSI GA+ GK GEWFGP+ A
Sbjct: 244 SRAGRAWRRTTNPDIER--EIVCLFADDPRAPYSIQNFVNHGAAACGKYPGEWFGPSATA 301
Query: 83 QVLRKLAKYDDWSSIVF 99
+ ++ LAK D S V+
Sbjct: 302 RCIQALAKKHDSSLRVY 318
>gi|426329870|ref|XP_004025954.1| PREDICTED: cysteine protease ATG4C [Gorilla gorilla gorilla]
Length = 491
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSI 97
+ KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 197 HRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGI 256
Query: 98 VFHVALDNTL 107
+VA D T+
Sbjct: 257 TIYVAQDCTV 266
>gi|344278625|ref|XP_003411094.1| PREDICTED: cysteine protease ATG4C [Loxodonta africana]
Length = 458
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIVSWFGDSPLALFGLHQLIEYGKKAGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYNSDV 271
>gi|302674653|ref|XP_003027011.1| hypothetical protein SCHCODRAFT_70973 [Schizophyllum commune H4-8]
gi|300100696|gb|EFI92108.1| hypothetical protein SCHCODRAFT_70973 [Schizophyllum commune H4-8]
Length = 858
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 41 YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIV 98
Y+ ++ +F D + AP+S+H++AL G + GK VG+WFGP+T A ++ L + +
Sbjct: 239 YIHLISLFLDSPSPSAPFSVHRMALAGRALGKDVGQWFGPSTAAGAIKALV--NAYPDAG 296
Query: 99 FHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
VA+ VV Q T +R+ + +W
Sbjct: 297 LGVAIAEDGVVYQ------TQRRQKEREREW 321
>gi|298231125|ref|NP_001177213.1| cysteine protease ATG4C [Sus scrofa]
gi|296874486|gb|ADH81748.1| autophagy related 4-like protein C [Sus scrofa]
Length = 458
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLTLFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYSSDV 271
>gi|198438023|ref|XP_002129793.1| PREDICTED: similar to CG6194 CG6194-PA [Ciona intestinalis]
Length = 517
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 27 GRDWQWNVN----SKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GR+W+W + + + + I+ F D + P+S+HQ+ G S G W+GPNT
Sbjct: 163 GRNWRWTPSRLSMEQSDIHRNIITWFLDEQNIRCPFSLHQLTEIGLSYRCKPGNWYGPNT 222
Query: 81 VAQVLRKL-----AKYDDWSSIVFHVALDNTLVVNQVKKLC 116
A +++ K + ++I+ ++A D+T+ ++ V ++C
Sbjct: 223 AAYIMQDALECAKGKTELLNNIMVYIAQDSTVYIDDVIEMC 263
>gi|357612380|gb|EHJ67950.1| autophagy related protein Atg4-like protein [Danaus plexippus]
Length = 354
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 25 FSGRDWQWNVNSKEEA--------YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGE 74
F GR W+W+ + + I+K F D+ + +P SIHQ+ G + GK G+
Sbjct: 61 FLGRSWRWSEKPIQNGREFQEDCLHRMIIKWFGDKSSVNSPLSIHQMVTLGEALGKKPGD 120
Query: 75 WFGPNTVAQVLRKLA-----KYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
W+GP +VA L+ + + ++ + +VA D+T+ + V C W
Sbjct: 121 WYGPASVAHCLKSVMVEASKENYEFDKLEVYVAQDSTIYIQDVYTHCRLPN------GCW 174
Query: 130 SSIVFHVALD-NTLVVNQVKKLCTTN 154
S++ V + T +N + C T+
Sbjct: 175 KSLILLVPVKLGTERLNPIYGPCLTS 200
>gi|351710014|gb|EHB12933.1| Cysteine protease ATG4D [Heterocephalus glaber]
Length = 607
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 32 WNVNSKEEA--YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA 89
W +E+ + +I+ F D AP +H++ G S GK G+W+GP+ VA +LRK
Sbjct: 333 WGALEREQELRHRQIVSWFADHPRAPLGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAV 392
Query: 90 KYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKY-------DDWSSIVFHV 136
+ SS + H+A+ V + CT K +A +W S+V V
Sbjct: 393 ES---SSELTHLAV-------YVSQDCTVYKADVAHLVASPDPAAEWKSVVILV 436
>gi|449268268|gb|EMC79138.1| Cysteine protease ATG4C [Columba livia]
Length = 459
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 28 RDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
R+W + E + KI+ F D + +HQ+ G GK G+W+GP VA +LRK
Sbjct: 184 RNWDESERRNEVYHRKIISWFGDSPLTAFGLHQLIEYGKKSGKIAGDWYGPAVVAHILRK 243
Query: 88 L---AKYDDWSSIVFHVALDNTLVVNQV 112
A+ + + +VA D T+ + V
Sbjct: 244 AVEEARDPELQGVTIYVAQDCTVYSSDV 271
>gi|321263995|ref|XP_003196715.1| hypothetical protein CGB_K2500C [Cryptococcus gattii WM276]
gi|317463192|gb|ADV24928.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1188
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 14 DWKGVTFEPSSFSGRDWQWNVNSKEE--AYLKILKMFEDRRT--APYSIHQIALTGASEG 69
DW+ + P++FS + + ++ Y +++ F D + P+S+H++AL G G
Sbjct: 589 DWR-LPSTPATFSEATTSQEIAALKDYAKYAQMVSWFLDDPSPLCPFSVHRMALIGKELG 647
Query: 70 KAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
K VGEWFGP+T A L+ LA I A D+ + + V DDW
Sbjct: 648 KEVGEWFGPSTAAGTLKTLANSFAPCGIAVATATDSIIYRSDVYAASNLPS------DDW 701
Query: 130 SSI 132
+ I
Sbjct: 702 NRI 704
>gi|186511209|ref|NP_001118859.1| cysteine protease ATG4b [Arabidopsis thaliana]
gi|62318602|dbj|BAD95023.1| hypothetical protein [Arabidopsis thaliana]
gi|332646469|gb|AEE79990.1| cysteine protease ATG4b [Arabidopsis thaliana]
Length = 267
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + +E YL+IL++F D + +SIH + L G S G A G W GP V +
Sbjct: 106 GRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSW 165
Query: 86 RKLAK 90
LA+
Sbjct: 166 ESLAR 170
>gi|407917424|gb|EKG10733.1| Peptidase C54 [Macrophomina phaseolina MS6]
Length = 437
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GR W+ +S+ E +IL +F D AP+SIH+ GA + GK GEWFGP+ A+ +
Sbjct: 179 GRAWRRGQDSQGE--RRILSLFADDPKAPFSIHRFVEHGAVACGKHPGEWFGPSATARCI 236
Query: 86 RKLAK-YDD 93
+ L+ Y+D
Sbjct: 237 QALSNGYED 245
>gi|148698945|gb|EDL30892.1| autophagy-related 4C (yeast), isoform CRA_b [Mus musculus]
Length = 466
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 200 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 259
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 260 DLQGLTIYVAQDCTVYNSDV 279
>gi|30689628|ref|NP_850412.1| cysteine protease ATG4a [Arabidopsis thaliana]
gi|75160546|sp|Q8S929.1|ATG4A_ARATH RecName: Full=Cysteine protease ATG4a; AltName:
Full=Autophagy-related protein 4 homolog a;
Short=AtAPG4a; Short=Protein autophagy 4a
gi|19912143|dbj|BAB88383.1| autophagy 4a [Arabidopsis thaliana]
gi|110742303|dbj|BAE99076.1| hypothetical protein [Arabidopsis thaliana]
gi|330255286|gb|AEC10380.1| cysteine protease ATG4a [Arabidopsis thaliana]
Length = 467
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W E+ YL+ L+ F D + +SIH + + GAS G A G W GP + +
Sbjct: 189 GRAWTKKSELPEQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWE 248
Query: 87 KLA 89
LA
Sbjct: 249 SLA 251
>gi|297828133|ref|XP_002881949.1| autophagy 4a [Arabidopsis lyrata subsp. lyrata]
gi|297327788|gb|EFH58208.1| autophagy 4a [Arabidopsis lyrata subsp. lyrata]
Length = 467
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W E+ YL+ L+ F D ++ +SIH + + G+S G A G W GP + +
Sbjct: 189 GRSWTKKSELPEQEYLETLEPFGDSESSAFSIHNLIIAGSSYGLAAGSWVGPYAICRAWE 248
Query: 87 KLA 89
LA
Sbjct: 249 SLA 251
>gi|37748391|gb|AAH58981.1| Autophagy-related 4C (yeast) [Mus musculus]
Length = 458
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 252 DLQGLTIYVAQDCTVYNSDV 271
>gi|225543220|ref|NP_778194.3| cysteine protease ATG4C [Mus musculus]
gi|225543224|ref|NP_001139439.1| cysteine protease ATG4C [Mus musculus]
gi|341940254|sp|Q811C2.2|ATG4C_MOUSE RecName: Full=Cysteine protease ATG4C; AltName: Full=AUT-like 3
cysteine endopeptidase; AltName: Full=Autophagin-3;
AltName: Full=Autophagy-related cysteine endopeptidase
3; AltName: Full=Autophagy-related protein 4 homolog C
Length = 458
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 252 DLQGLTIYVAQDCTVYNSDV 271
>gi|27763971|emb|CAC85555.1| Apg4-C protein [Mus musculus]
gi|148698944|gb|EDL30891.1| autophagy-related 4C (yeast), isoform CRA_a [Mus musculus]
Length = 458
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 252 DLQGLTIYVAQDCTVYNSDV 271
>gi|431896953|gb|ELK06217.1| Cysteine protease ATG4C [Pteropus alecto]
Length = 378
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSI 97
+ KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ + I
Sbjct: 169 HRKIISWFGDSPLALFGLHQLIKYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPELQGI 228
Query: 98 VFHVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 229 TIYVAQDCTVYSSDV 243
>gi|46136685|ref|XP_390034.1| hypothetical protein FG09858.1 [Gibberella zeae PH-1]
Length = 360
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 27 GR-DWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQV 84
GR DW+ + +EE ++LK F D APYSIH GAS GK GEWFGP+ A+
Sbjct: 173 GRGDWRRGESVEEEC--RLLKDFADDPRAPYSIHSFVRHGASACGKYPGEWFGPSATARC 230
Query: 85 LRKLAKYDDWSSIVF 99
++ L + S V+
Sbjct: 231 IQALTNSHESSIRVY 245
>gi|42571227|ref|NP_973687.1| cysteine protease ATG4a [Arabidopsis thaliana]
gi|330255287|gb|AEC10381.1| cysteine protease ATG4a [Arabidopsis thaliana]
Length = 422
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W E+ YL+ L+ F D + +SIH + + GAS G A G W GP + +
Sbjct: 144 GRAWTKKSELPEQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWE 203
Query: 87 KLA 89
LA
Sbjct: 204 SLA 206
>gi|348666332|gb|EGZ06159.1| hypothetical protein PHYSODRAFT_532364 [Phytophthora sojae]
Length = 398
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 27 GRDWQWNVNSKEE-------AYLKILKMFEDRR--TAPYSIHQIALTGASEGKAVGEWFG 77
GRDW+ + E Y+ +L+ F D YSIH + G K GEW+G
Sbjct: 92 GRDWRLPALFEAEIDARLPDKYVTLLRWFADSPDIECRYSIHHMVKLGMQYDKLPGEWYG 151
Query: 78 PNTVAQVLRKLA---KYDDWSSIVFHVALDNTLVVNQVKKLC----TTNKRKLAKYDDWS 130
P T AQVLR L + + + +V + + + V +LC + DWS
Sbjct: 152 PTTAAQVLRDLVNLHRREFGGELAMYVPQEGVVYTDDVTRLCFFDPLLHPPTAEDSSDWS 211
Query: 131 SIVFHVALDNTLVVNQVKKLCTTNKRYI 158
+ + + + L ++QV N+RY+
Sbjct: 212 TALL-ILIPLRLGLDQV------NERYV 232
>gi|168036750|ref|XP_001770869.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677928|gb|EDQ64393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 25 FSGRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
+ GR W+ N + + YL+IL+ F D + +SIH + G G A G W GP + +
Sbjct: 85 YLGRTWRRNACQECLQEYLQILQSFGDSESCSFSIHNLLEAGRPFGLAAGSWLGPYALCR 144
Query: 84 VLRKLAKYDD 93
L LAK D+
Sbjct: 145 TLEALAKADE 154
>gi|354470829|ref|XP_003497647.1| PREDICTED: cysteine protease ATG4C [Cricetulus griseus]
Length = 458
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +H++ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 259 YVAQDCTVYNSDV 271
>gi|166990618|sp|A7KAI3.1|ATG4_PICAN RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|129714817|gb|ABO31288.1| Atg4p [Ogataea angusta]
Length = 509
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GR W+++ + + +I+ F D TAP+SIH GA+ GK GEWFGP+ A+ +
Sbjct: 149 GRGWRYDQTRECAKHAEIVSWFVDIPTAPFSIHNFVEQGANCAGKKPGEWFGPSAAARSI 208
Query: 86 RKL--AKYDDWSSIVFHVA 102
+ L A YD V+ A
Sbjct: 209 QVLCEANYDKTGLKVYFTA 227
>gi|355558068|gb|EHH14848.1| hypothetical protein EGK_00836 [Macaca mulatta]
Length = 458
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSIVF 99
KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D I
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLQGITI 258
Query: 100 HVALD 104
+VA D
Sbjct: 259 YVAQD 263
>gi|342321655|gb|EGU13587.1| Cysteine protease ATG4 [Rhodotorula glutinis ATCC 204091]
Length = 1119
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 41 YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIV 98
Y +IL +F D + +P+S+H+ A G GK +GEWFGP+T A ++ L + + +
Sbjct: 762 YARILSLFLDDPSPISPFSVHRFAQQGKVLGKEIGEWFGPSTAAGAIKTLVNAYEPAGLK 821
Query: 99 FHVALDNTLVVNQVKKLCTTNKRK 122
+D T+ ++V T + K
Sbjct: 822 VVSCVDGTVYESEVVAASTKDGEK 845
>gi|409050837|gb|EKM60313.1| hypothetical protein PHACADRAFT_179659 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1009
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 27 GRDWQWNVN----SKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNT 80
GRDW+ + S Y++I+ F D + P+S+H++AL G G VG+WFGP+T
Sbjct: 390 GRDWRKPPHPVPTSDYATYIQIITWFFDDPSLLCPFSVHRMALVGKQLGVKVGQWFGPST 449
Query: 81 VAQVLRKLAKYDDWSSIVFHVALDNTLV 108
A ++ ++ + SS+V + TLV
Sbjct: 450 AAGAIKYVSAH---SSMVPNQPARRTLV 474
>gi|336368847|gb|EGN97189.1| cysteine protease required for autophagy [Serpula lacrymans var.
lacrymans S7.3]
Length = 873
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 29 DWQ---WNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVA 82
DW+ + V++ + A Y++I+ F D + +P+S+H++AL G GK VG+WFGP+T A
Sbjct: 386 DWRRPPYPVHTTDYATYVQIITWFFDTPSPQSPFSVHRMALAGKDLGKDVGQWFGPSTAA 445
Query: 83 QVLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
++ L + + VA D + + V
Sbjct: 446 GAIKTLVHAFPEAGLGVSVASDGVIFQSDV 475
>gi|339252578|ref|XP_003371512.1| cysteine protease ATG4B [Trichinella spiralis]
gi|316968242|gb|EFV52545.1| cysteine protease ATG4B [Trichinella spiralis]
Length = 414
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 25 FSGRDWQWNVNS--KEEAYL--KILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPN 79
+ GRDW + ++EA + K++ +F D T+P+S+H + G GK G W+GP
Sbjct: 130 YLGRDWLLGQSGLPEDEALMHRKVIGLFCDNLTSPFSLHNLVQVGQQLFGKQAGSWYGPV 189
Query: 80 TVAQVLR----KLAKYDDWSSIVFHVALDNTLVVNQVKKL 115
+V Q+L+ + + HV D L+++ V++L
Sbjct: 190 SVLQILQVAMNNAIERGLVEGLAVHVIGDGELIIDDVERL 229
>gi|366995231|ref|XP_003677379.1| hypothetical protein NCAS_0G01390 [Naumovozyma castellii CBS 4309]
gi|342303248|emb|CCC71026.1| hypothetical protein NCAS_0G01390 [Naumovozyma castellii CBS 4309]
Length = 495
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++++ +K+ + +I++ F D P+S+HQ G GK GEWFGP A+ +
Sbjct: 155 GRDFRYDPENKDISENRIIEWFIDAPEKPFSLHQFITEGMELSGKNPGEWFGPAATARSI 214
Query: 86 RKLA-KYDDWSSIVFHVALDNT-LVVNQVKKLCTTNKRKL 123
+ L K+ D V++ + + ++VK++ NK+ L
Sbjct: 215 QSLIRKFPDCGIAECLVSVSSGDIYSDEVKQVFADNKKNL 254
>gi|121704590|ref|XP_001270558.1| peptidase family C54 protein [Aspergillus clavatus NRRL 1]
gi|166990611|sp|A1CJ08.1|ATG4_ASPCL RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|119398704|gb|EAW09132.1| peptidase family C54 protein [Aspergillus clavatus NRRL 1]
Length = 400
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +EA ++L F D AP+SIH+ GA K GEWFGP+ A+ +
Sbjct: 150 GRDWRRGTEAGKEA--QLLHQFADHPEAPFSIHRFVQHGAEFCNKYPGEWFGPSATARCI 207
Query: 86 RKLAKYDDWSSIVFHVALD 104
+ L S + ++ D
Sbjct: 208 QALVAQQGSSELRVYITDD 226
>gi|241729578|ref|XP_002404604.1| cysteine protease, putative [Ixodes scapularis]
gi|215505492|gb|EEC14986.1| cysteine protease, putative [Ixodes scapularis]
Length = 433
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 53 TAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDD--WSSIVFHVALDNTL 107
+ P+S+H + G GK G+W+GP++VA +L+ A + D + + +VA D T+
Sbjct: 179 STPFSLHNLVQRGRESGKKAGDWYGPSSVAYILKDALEDAAHRDQRLAQLCIYVAQDCTI 238
Query: 108 VVNQVKKLCTTNKRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 151
++ V LC+ + + VF A Q +++C
Sbjct: 239 YMDDVTALCSAGSTEGVTHRRLPRTVF--ARREMFSGGQTQRMC 280
>gi|336467357|gb|EGO55521.1| hypothetical protein NEUTE1DRAFT_85886 [Neurospora tetrasperma FGSC
2508]
gi|350288001|gb|EGZ69237.1| hypothetical protein NEUTE2DRAFT_94213 [Neurospora tetrasperma FGSC
2509]
Length = 506
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ + E I+ +F D APYS+H GA+ GK GEWFGP+ A+ +
Sbjct: 245 GREWRRGTDLDAEK--DIIALFADDPRAPYSLHNFVKYGATACGKYPGEWFGPSATARCI 302
Query: 86 RKLA 89
+ LA
Sbjct: 303 QALA 306
>gi|367032280|ref|XP_003665423.1| hypothetical protein MYCTH_2067869 [Myceliophthora thermophila ATCC
42464]
gi|347012694|gb|AEO60178.1| hypothetical protein MYCTH_2067869 [Myceliophthora thermophila ATCC
42464]
Length = 456
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ + +A IL +F D APYS+H G + GK GEWFGP+ A+ +
Sbjct: 196 GRDWRRMTDP--DAERPILALFADDSRAPYSLHNFVKHGELACGKYPGEWFGPSATARCI 253
Query: 86 RKLAKYDDWSSIVFHVA 102
+ LA + S V+
Sbjct: 254 QALANKHESSLRVYSTG 270
>gi|85067704|ref|XP_959438.1| hypothetical protein NCU02433 [Neurospora crassa OR74A]
gi|62899773|sp|Q7S3X7.1|ATG4_NEUCR RecName: Full=Probable cysteine protease atg-4; AltName:
Full=Autophagy-related protein 4
gi|28920860|gb|EAA30202.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 506
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ + E I+ +F D APYS+H GA+ GK GEWFGP+ A+ +
Sbjct: 245 GREWRRGTDLDAEK--DIIALFADDPRAPYSLHNFVKYGATACGKYPGEWFGPSATARCI 302
Query: 86 RKLA 89
+ LA
Sbjct: 303 QALA 306
>gi|74147895|dbj|BAE22307.1| unnamed protein product [Mus musculus]
Length = 458
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F + A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGNSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 252 DLQGLTIYVAQDCTVYNSDV 271
>gi|378731837|gb|EHY58296.1| autophagy-like protein 4 [Exophiala dermatitidis NIH/UT8656]
Length = 480
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKLA 89
K EA +IL +F D AP+SIH+ GAS GK G+WFGP+ A +R+L+
Sbjct: 213 KREA--EILSLFADSPDAPFSIHRFVQHGASACGKHPGQWFGPSATASCIRELS 264
>gi|326925485|ref|XP_003208945.1| PREDICTED: cysteine protease ATG4C-like [Meleagris gallopavo]
Length = 458
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
++E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A+
Sbjct: 191 RDEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHILRKAVEEARDP 250
Query: 93 DWSSIVFHVALDNTLVVNQV 112
+ + +VA D T+ + V
Sbjct: 251 ELQGVTVYVAQDCTVYSSDV 270
>gi|221046296|dbj|BAH14825.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LR
Sbjct: 231 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILR 280
>gi|157818033|ref|NP_001101418.1| cysteine protease ATG4C [Rattus norvegicus]
gi|149044549|gb|EDL97808.1| similar to APG4 autophagy 4 homolog C [Rattus norvegicus]
Length = 458
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 26 SGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
SG+ + E + +I+ F D A + +H++ G GK G+W+GP VA +L
Sbjct: 182 SGKHPDDHAVQSEIYHRQIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHIL 241
Query: 86 RKL---AKYDDWSSIVFHVALDNTLVVNQV 112
RK A++ D + +VA D T+ + V
Sbjct: 242 RKAVEEARHPDLQGLTIYVAQDCTVYNSDV 271
>gi|118094640|ref|XP_422520.2| PREDICTED: cysteine protease ATG4C [Gallus gallus]
Length = 459
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDWSSI 97
+ KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A+ + +
Sbjct: 197 HRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHILRKAVEEARDPELQGV 256
Query: 98 VFHVALDNTLVVNQV 112
+VA D T+ + V
Sbjct: 257 TVYVAQDCTVYSSDV 271
>gi|363754893|ref|XP_003647662.1| hypothetical protein Ecym_6474 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891299|gb|AET40845.1| hypothetical protein Ecym_6474 [Eremothecium cymbalariae
DBVPG#7215]
Length = 469
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 27 GRDWQWNVNSKE--EAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQ 83
GRD++ + + + E +KI++ FED P+S+H+ G GK GEWFGP+ +++
Sbjct: 143 GRDFRISGSDSDINEVEMKIIRWFEDNPKHPFSLHKFVQEGYKLSGKKPGEWFGPSAISR 202
Query: 84 VLRKL 88
+R L
Sbjct: 203 SIRSL 207
>gi|149507363|ref|XP_001514370.1| PREDICTED: cysteine protease ATG4C [Ornithorhynchus anatinus]
Length = 459
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D + +HQ+ G GK G+W+GP VA +LRK ++ D
Sbjct: 194 EGFHRKIISWFGDSPRTYFGLHQLTEYGKKSGKTAGDWYGPAVVAHILRKAVEEVRHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
+ +VA D T+ + V
Sbjct: 254 QGLTVYVAQDCTVYNSDV 271
>gi|37360148|dbj|BAC98052.1| mKIAA0943 protein [Mus musculus]
gi|148707989|gb|EDL39936.1| autophagy-related 4B (yeast), isoform CRA_d [Mus musculus]
Length = 266
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 79 NTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+V RKLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 19 GSVLAFCRKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 59
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
RKLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 26 RKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 59
>gi|357507987|ref|XP_003624282.1| Cysteine protease ATG4 [Medicago truncatula]
gi|147742964|sp|A2Q1V6.1|ATG4_MEDTR RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|124359485|gb|ABN05923.1| Peptidase C54 [Medicago truncatula]
gi|355499297|gb|AES80500.1| Cysteine protease ATG4 [Medicago truncatula]
Length = 487
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ V+ ++ Y+ IL++F D A +SIH + G G AVG W GP + +
Sbjct: 193 GRSWRKTVDKPVDKEYIDILQLFGDSEAAAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTW 252
Query: 86 RKLAK 90
LA+
Sbjct: 253 EVLAR 257
>gi|56118282|ref|NP_001007883.1| cysteine protease ATG4C [Xenopus (Silurana) tropicalis]
gi|61211764|sp|Q68EP9.1|ATG4C_XENTR RecName: Full=Cysteine protease ATG4C; AltName:
Full=Autophagy-related protein 4 homolog C
gi|51258902|gb|AAH80152.1| apg4c protein [Xenopus (Silurana) tropicalis]
gi|89269108|emb|CAJ81923.1| APG4 autophagy 4 homolog C (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
Length = 450
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 35 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD-- 92
++ E+ + KI+ F D A + +HQ+ G + GK G+W+GP V+ +LRK +
Sbjct: 187 SNSEDFHQKIISWFADYPLAYFGLHQLVKLGKNSGKVAGDWYGPAVVSHLLRKAIEESSD 246
Query: 93 -DWSSIVFHVALDNTLVVNQVKKL 115
+ I +VA D T+ V L
Sbjct: 247 PELQGITIYVAQDCTIYSADVYDL 270
>gi|387015378|gb|AFJ49808.1| Cysteine protease ATG4C-like [Crotalus adamanteus]
Length = 457
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 28 RDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
R+ + + +E+ + +I+ F D A + +H++ G GK G+W+GP VA +LRK
Sbjct: 183 RNQETEESVEEQYHRRIISWFADSPFANFGLHRLIEYGKKSGKIAGDWYGPAVVAHLLRK 242
Query: 88 L---AKYDDWSSIVFHVALDNTLVVNQV 112
A+ + I +VA D T+ + V
Sbjct: 243 AVEKARDPELQGITIYVAQDCTVYKSDV 270
>gi|148693227|gb|EDL25174.1| autophagy-related 4D (yeast), isoform CRA_c [Mus musculus]
Length = 257
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LR
Sbjct: 212 HRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILR 257
>gi|147905876|ref|NP_001088249.1| cysteine protease ATG4C [Xenopus laevis]
gi|61211751|sp|Q5XH30.1|ATG4C_XENLA RecName: Full=Cysteine protease ATG4C; AltName:
Full=Autophagy-related protein 4 homolog C
gi|54038152|gb|AAH84245.1| LOC495080 protein [Xenopus laevis]
Length = 450
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD---DW 94
E+ + KI+ F D A + +HQ+ G + GK G+W+GP V+ +LRK + +
Sbjct: 190 EDLHRKIISWFADYPLAYFGLHQLVKLGKNSGKVAGDWYGPAVVSHLLRKAIEESSDPEL 249
Query: 95 SSIVFHVALDNTLVVNQVKKL-CTTNKRK 122
I +VA D T+ V L C K
Sbjct: 250 QGITIYVAQDCTIYNADVYDLQCNKGNEK 278
>gi|149020503|gb|EDL78308.1| rCG31864, isoform CRA_a [Rattus norvegicus]
Length = 256
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LR
Sbjct: 211 HRRIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSVVAHILR 256
>gi|166990663|sp|Q2HH40.2|ATG4_CHAGB RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
Length = 448
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ + E I+ +F D APYS+ GA + GK GEWFGP+ A+ +
Sbjct: 187 GRDWRRTTDPGAER--NIVALFADDARAPYSLQNFVKHGAIACGKHPGEWFGPSATARCI 244
Query: 86 RKLA 89
+ LA
Sbjct: 245 QALA 248
>gi|148226916|ref|NP_001087417.1| cysteine protease ATG4D [Xenopus laevis]
gi|61211765|sp|Q68FJ9.1|ATG4D_XENLA RecName: Full=Cysteine protease ATG4D; AltName: Full=Autophagin-4;
AltName: Full=Autophagy-related protein 4 homolog D
gi|51260960|gb|AAH79754.1| MGC84754 protein [Xenopus laevis]
Length = 469
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSS 96
++ + I++ F D +P+ +HQ+ G+ GK G+W+GP+ VA +++K + +
Sbjct: 204 DQVHRNIMRWFSDHPGSPFGLHQLVTLGSIFGKKAGDWYGPSIVAHIIKKAIETSSEVPE 263
Query: 97 IVFHVALDNTLVVNQVKKL 115
+ +V+ D T+ +++L
Sbjct: 264 LSVYVSQDCTVYKADIEQL 282
>gi|145345840|ref|XP_001417407.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577634|gb|ABO95700.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 27 GRDWQWNVNSKE--EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
GR W+ V +KE E+ +L MF D +AP+SIH + T + G G WF P+ + +
Sbjct: 76 GRHWRRQVKAKEDDESVDHVLSMFIDDASAPFSIHSVCETTTAWGAPPGRWFEPSVMCRA 135
Query: 85 LRKL--AKYDDWSSIVFHV 101
L A D + I HV
Sbjct: 136 FSALIEANGDLRNQIAVHV 154
>gi|116179672|ref|XP_001219685.1| hypothetical protein CHGG_00464 [Chaetomium globosum CBS 148.51]
gi|88184761|gb|EAQ92229.1| hypothetical protein CHGG_00464 [Chaetomium globosum CBS 148.51]
Length = 425
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ + E I+ +F D APYS+ GA + GK GEWFGP+ A+ +
Sbjct: 187 GRDWRRTTDPGAER--NIVALFADDARAPYSLQNFVKHGAIACGKHPGEWFGPSATARCI 244
Query: 86 RKLA 89
+ LA
Sbjct: 245 QALA 248
>gi|168693565|ref|NP_001108301.1| uncharacterized protein LOC100137698 [Xenopus laevis]
gi|163915830|gb|AAI57741.1| LOC100137698 protein [Xenopus laevis]
Length = 468
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 22 PSSFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTV 81
P + S R N + + I++ F D +AP+ +H++ G+ GK G+W+GP+ V
Sbjct: 192 PHAHSSRAPHGN-----QVHRNIIRWFSDHPSAPFGLHRMVALGSIFGKKAGDWYGPSIV 246
Query: 82 AQVLRKLAKYD-DWSSIVFHVALDNTLVVNQVKKL 115
A +++K + + + + +V+ D T+ +++L
Sbjct: 247 AHIIKKAIETSCEVAELSVYVSQDCTVYKADIEQL 281
>gi|390177147|ref|XP_001357920.3| GA19429 [Drosophila pseudoobscura pseudoobscura]
gi|388858923|gb|EAL27056.3| GA19429 [Drosophila pseudoobscura pseudoobscura]
Length = 676
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ +S+ + + KI+K F D + IH + G + GK G+W+
Sbjct: 317 FLGRSWRYDSDSQLHSTYEDNMHKKIIKWFGDSSSKSSPFSIHALVRLGETLGKKPGDWY 376
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 377 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYMQDIEDQCS 422
>gi|354544955|emb|CCE41680.1| hypothetical protein CPAR2_802300 [Candida parapsilosis]
Length = 423
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKL 88
E A L ILK+F+D T+P+S+H +S V G+WFGPN + ++KL
Sbjct: 171 ESAQLDILKLFQDDPTSPFSLHNFIRVASSSPLLVKPGQWFGPNAASLSIKKL 223
>gi|195158262|ref|XP_002020011.1| GL13755 [Drosophila persimilis]
gi|194116780|gb|EDW38823.1| GL13755 [Drosophila persimilis]
Length = 678
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ +S+ + + KI+K F D + IH + G + GK G+W+
Sbjct: 317 FLGRSWRYDSDSQLHSTYEDNMHKKIIKWFGDSSSKSSPFSIHALVRLGETLGKKPGDWY 376
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 377 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYMQDIEDQCS 422
>gi|113931596|ref|NP_001039246.1| autophagy related 4D, cysteine peptidase [Xenopus (Silurana)
tropicalis]
gi|89273389|emb|CAJ82151.1| APG4 autophagy 4 homolog D (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
gi|114108226|gb|AAI22932.1| APG4 autophagy 4 homolog D (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
Length = 470
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 39 EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSI 97
E + I+ F D +AP+ +H++ G+ GK G+W+GP+ VA +++K + + +
Sbjct: 204 EVHQNIVSWFSDHASAPFGLHRMVALGSIFGKRAGDWYGPSIVAHIIKKAIESSSEVPDL 263
Query: 98 VFHVALDNTLVVNQVKKL 115
+V+ D T+ +++L
Sbjct: 264 SVYVSQDCTVYKADIEQL 281
>gi|302787965|ref|XP_002975752.1| hypothetical protein SELMODRAFT_54753 [Selaginella moellendorffii]
gi|300156753|gb|EFJ23381.1| hypothetical protein SELMODRAFT_54753 [Selaginella moellendorffii]
Length = 358
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
GR W+ YL+IL F D + P+SIH G+ G A G W GP +
Sbjct: 120 GRGWRRGEQPYAREYLEILHSFVDSPSPACPFSIHNFIRAGSPYGLAAGSWLGPYALCHA 179
Query: 85 LRKLAKYD 92
+ LA+ D
Sbjct: 180 IEALARND 187
>gi|302783857|ref|XP_002973701.1| hypothetical protein SELMODRAFT_54035 [Selaginella moellendorffii]
gi|300158739|gb|EFJ25361.1| hypothetical protein SELMODRAFT_54035 [Selaginella moellendorffii]
Length = 358
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
GR W+ YL+IL F D + P+SIH G+ G A G W GP +
Sbjct: 120 GRGWRRGEQPYAREYLEILHSFVDSPSPACPFSIHNFIRAGSPYGLAAGSWLGPYALCHA 179
Query: 85 LRKLAKYD 92
+ LA+ D
Sbjct: 180 IEALARND 187
>gi|62899783|sp|Q86ZL5.1|ATG4_PODAS RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|27802993|emb|CAD60696.1| unnamed protein product [Podospora anserina]
Length = 500
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 24 SFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVA 82
S +GR W+ N E +I+ +F D APYSI GA+ GK GEWFGP+ A
Sbjct: 244 SRAGRAWRRTTNPDIER--EIVCLFADDPRAPYSIQNFVNHGAAACGKYPGEWFGPSATA 301
Query: 83 QVLRKLAKY 91
+ + L Y
Sbjct: 302 RCIHSLRVY 310
>gi|3212867|gb|AAC23418.1| unknown protein [Arabidopsis thaliana]
Length = 451
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA 89
E+ YL+ L+ F D + +SIH + + GAS G A G W GP + + LA
Sbjct: 184 EQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWESLA 235
>gi|164660504|ref|XP_001731375.1| hypothetical protein MGL_1558 [Malassezia globosa CBS 7966]
gi|159105275|gb|EDP44161.1| hypothetical protein MGL_1558 [Malassezia globosa CBS 7966]
Length = 651
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
GR W+ K Y +IL F D + P+SIH++ G G G+WFGP+T A
Sbjct: 340 GRHWRRRAKQKTHPQYARILSWFMDDPSLECPFSIHRLVDEGQRLGVQAGDWFGPSTAAF 399
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQV 112
L KL + D + V D L QV
Sbjct: 400 ALCKLIQAYDACGLGVVVTNDGMLYKEQV 428
>gi|195394658|ref|XP_002055959.1| GJ10670 [Drosophila virilis]
gi|194142668|gb|EDW59071.1| GJ10670 [Drosophila virilis]
Length = 672
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 318 FLGRSWRYDAESQLHSTYEDNMHKKIIKWFGDSSSKSSPFSIHALVRLGEQLGKKPGDWY 377
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + +++ C+
Sbjct: 378 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYMQDIEEQCS 423
>gi|345311182|ref|XP_001519565.2| PREDICTED: cysteine protease ATG4D-like, partial [Ornithorhynchus
anatinus]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 34 VNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
+ +E + +I+ F D AP+S+H++ G GK G+W+GP+ A +L
Sbjct: 96 LQEQERQHRRIVSWFADHPQAPFSLHRLVRLGQGSGKRAGDWYGPSLTAHLL 147
>gi|448112117|ref|XP_004202013.1| Piso0_001485 [Millerozyma farinosa CBS 7064]
gi|359465002|emb|CCE88707.1| Piso0_001485 [Millerozyma farinosa CBS 7064]
Length = 480
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQV 84
GR + + +S E+ + I+ MF D AP+S+H + V GEWFGPN +
Sbjct: 166 GRGFTY-ADSSEKKHSDIIDMFTDDPKAPFSLHNFIKAASDSPLKVKPGEWFGPNAASIS 224
Query: 85 LRKLAK--YDDWSSIVFHVALDNTLVV--NQVKKLCTTNK 120
+++L K +D+ SS F V + + + +++ KL N+
Sbjct: 225 IKRLCKSQFDESSSPRFRVIISESCDIYDDKIGKLLQENE 264
>gi|195444549|ref|XP_002069918.1| GK11310 [Drosophila willistoni]
gi|194166003|gb|EDW80904.1| GK11310 [Drosophila willistoni]
Length = 676
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G + GK G+W+
Sbjct: 324 FLGRSWRYDAESQLHSTYEDNMHKKIIKWFGDSSSKSSPFSIHALVSLGTALGKKPGDWY 383
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 384 GPASVSYLLKHALEHATQENADFDNISVYVAKDCTIYIQDIEDQCS 429
>gi|255576671|ref|XP_002529225.1| Cysteine protease ATG4B, putative [Ricinus communis]
gi|223531343|gb|EEF33181.1| Cysteine protease ATG4B, putative [Ricinus communis]
Length = 489
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W ++AY++IL +F D AP+SIH + G + A G W GP + +
Sbjct: 188 GRAWTKPFQKPMDQAYVEILHLFGDSEAAPFSIHNLIQAGKAYSLAAGSWVGPYAMCRSW 247
Query: 86 RKLAK 90
LA+
Sbjct: 248 ESLAR 252
>gi|194764839|ref|XP_001964535.1| GF23235 [Drosophila ananassae]
gi|190614807|gb|EDV30331.1| GF23235 [Drosophila ananassae]
Length = 668
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G + GK G+W+
Sbjct: 314 FMGRTWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGENLGKKPGDWY 373
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 374 GPASVSYLLKHALEHAAQENADFDNISIYVAKDCTIYLQDIEDQCS 419
>gi|322707969|gb|EFY99546.1| ATG4 protein [Metarhizium anisopliae ARSEF 23]
Length = 430
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + E ++L +F D APYSIH G K GEWFGP+ A+ +
Sbjct: 197 GRDWRRGMLPDRER--RLLALFADDPRAPYSIHNFVRHGEKYCSKYPGEWFGPSATARCI 254
Query: 86 RKL 88
+ L
Sbjct: 255 QDL 257
>gi|195570668|ref|XP_002103326.1| GD20357 [Drosophila simulans]
gi|194199253|gb|EDX12829.1| GD20357 [Drosophila simulans]
Length = 703
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 350 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 409
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 410 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 455
>gi|17862242|gb|AAL39598.1| LD17482p [Drosophila melanogaster]
Length = 653
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 300 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 359
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 360 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 405
>gi|24647125|ref|NP_650452.1| CG6194 [Drosophila melanogaster]
gi|23171357|gb|AAF55180.2| CG6194 [Drosophila melanogaster]
gi|261490735|gb|ACX83596.1| RE44406p [Drosophila melanogaster]
Length = 668
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 315 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 374
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 375 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 420
>gi|195328749|ref|XP_002031074.1| GM25780 [Drosophila sechellia]
gi|194120017|gb|EDW42060.1| GM25780 [Drosophila sechellia]
Length = 703
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 350 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 409
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 410 GPASVSYLLKHALEHASQENADFDNISVYVAKDCTIYLQDIEDQCS 455
>gi|195501322|ref|XP_002097748.1| GE26385 [Drosophila yakuba]
gi|194183849|gb|EDW97460.1| GE26385 [Drosophila yakuba]
Length = 706
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 353 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 412
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 413 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 458
>gi|194901010|ref|XP_001980048.1| GG20629 [Drosophila erecta]
gi|190651751|gb|EDV49006.1| GG20629 [Drosophila erecta]
Length = 708
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDRRTAPYS--IHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D + IH + G GK G+W+
Sbjct: 355 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 414
Query: 77 GPNTVAQVLRKLAKY-----DDWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 415 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 460
>gi|356568569|ref|XP_003552483.1| PREDICTED: cysteine protease ATG4-like [Glycine max]
Length = 485
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ ++ ++ Y+ +L++F D + +SIH + G G AVG W GP + +
Sbjct: 193 GRSWRKPIDKPLDKEYIDVLQLFGDSEASAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTW 252
Query: 86 RKLAK 90
LA+
Sbjct: 253 EVLAR 257
>gi|380092671|emb|CCC09424.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 515
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ + E I+ +F D AP+S+H GA+ GK GEWFGP A+ +
Sbjct: 254 GREWRRETDLDAEK--DIIALFADDPRAPFSLHNFVKYGATACGKYPGEWFGPLATARCI 311
Query: 86 RKL 88
+ L
Sbjct: 312 QAL 314
>gi|323331874|gb|EGA73286.1| Atg4p [Saccharomyces cerevisiae AWRI796]
Length = 347
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 19 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 78
Query: 86 RKL 88
+ L
Sbjct: 79 QSL 81
>gi|356531828|ref|XP_003534478.1| PREDICTED: cysteine protease ATG4-like [Glycine max]
Length = 486
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVN-SKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ ++ ++ Y+ +L++F D + +SIH + G G AVG W GP + +
Sbjct: 193 GRSWRKPIDKPPDKEYIDVLQLFGDSEASAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTW 252
Query: 86 RKLAK 90
LA+
Sbjct: 253 EVLAR 257
>gi|37362688|ref|NP_014176.2| Atg4p [Saccharomyces cerevisiae S288c]
gi|61252248|sp|P53867.2|ATG4_YEAST RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|166990654|sp|A6ZRL7.1|ATG4_YEAS7 RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|1173491|gb|AAA86498.1| ORF494 [Saccharomyces cerevisiae]
gi|151944321|gb|EDN62599.1| cysteine protease [Saccharomyces cerevisiae YJM789]
gi|190409197|gb|EDV12462.1| anchor protein [Saccharomyces cerevisiae RM11-1a]
gi|285814439|tpg|DAA10333.1| TPA: Atg4p [Saccharomyces cerevisiae S288c]
gi|323352870|gb|EGA85172.1| Atg4p [Saccharomyces cerevisiae VL3]
gi|392297128|gb|EIW08229.1| Atg4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 494
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|323307493|gb|EGA60764.1| Atg4p [Saccharomyces cerevisiae FostersO]
Length = 494
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|256272398|gb|EEU07381.1| Atg4p [Saccharomyces cerevisiae JAY291]
Length = 494
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|365763488|gb|EHN05016.1| Atg4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 494
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|323346814|gb|EGA81093.1| Atg4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 494
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|323303340|gb|EGA57136.1| Atg4p [Saccharomyces cerevisiae FostersB]
Length = 494
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|323335883|gb|EGA77161.1| Atg4p [Saccharomyces cerevisiae Vin13]
Length = 494
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|1183991|emb|CAA93375.1| N1274 [Saccharomyces cerevisiae]
gi|1302243|emb|CAA96126.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 506
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 178 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 237
Query: 86 RKL 88
+ L
Sbjct: 238 QSL 240
>gi|259149141|emb|CAY82383.1| Atg4p [Saccharomyces cerevisiae EC1118]
Length = 506
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 178 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 237
Query: 86 RKL 88
+ L
Sbjct: 238 QSL 240
>gi|349580723|dbj|GAA25882.1| K7_Atg4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 494
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|224994904|gb|ACN76571.1| cysteine proteinase [Triticum aestivum]
Length = 486
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNV-NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ N Y++IL +F D +SIH + G S G A G W GP + +
Sbjct: 188 GRSWRKPAQNPSNPEYIRILHLFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 247
Query: 86 RKLAK 90
+ L +
Sbjct: 248 QTLIR 252
>gi|448114689|ref|XP_004202639.1| Piso0_001485 [Millerozyma farinosa CBS 7064]
gi|359383507|emb|CCE79423.1| Piso0_001485 [Millerozyma farinosa CBS 7064]
Length = 480
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQV 84
GRD+ + V+ E+ + I+ MF D P+S+H + V GEWFGPN +
Sbjct: 166 GRDFAY-VDGSEKKHSDIIDMFTDEPKTPFSLHNFIKAASDSPLKVKPGEWFGPNAASIS 224
Query: 85 LRKLAK--YDDWSSIVFHVALDNT 106
+++L K +D S F V + +
Sbjct: 225 IKRLCKSQFDGSVSPSFRVIISES 248
>gi|207341865|gb|EDZ69806.1| YNL223Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 371
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 178 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 237
Query: 86 RKL 88
+ L
Sbjct: 238 QSL 240
>gi|224092798|ref|XP_002309707.1| predicted protein [Populus trichocarpa]
gi|222852610|gb|EEE90157.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ V+ + Y++IL +F D + +SIH + G + G A G W GP + +
Sbjct: 192 GRSWRKPVDKPLDRDYVEILHLFGDSEASAFSIHNLLQAGKAYGLAAGSWVGPYAMCRSW 251
Query: 86 RKLAK 90
LA+
Sbjct: 252 ESLAR 256
>gi|407848120|gb|EKG03593.1| AUT2/APG4/ATG4 cysteine peptidase, putative,cysteine peptidase,
Clan CA, family C54, putative [Trypanosoma cruzi]
Length = 357
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
F+G + +E + +F D +AP+ IH + G G GEWFGP +A+
Sbjct: 114 FNGGGPRIGSERLQELRARTQTLFCDVPSAPFGIHAVTSEGTKHGVNCGEWFGPTPIAKT 173
Query: 85 LRKL 88
L L
Sbjct: 174 LSAL 177
>gi|407408842|gb|EKF32115.1| AUT2/APG4/ATG4 cysteine peptidase [Trypanosoma cruzi marinkellei]
Length = 357
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
F+G +E + +F D +AP+ IH I G G GEWFGP +A+
Sbjct: 114 FNGGGPHIGNERLQELRARTQTLFCDVPSAPFGIHAITSEGTKHGVKCGEWFGPTPIAKT 173
Query: 85 LRKL 88
L L
Sbjct: 174 LNAL 177
>gi|320169048|gb|EFW45947.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 918
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 35 NSKEEAYLKILKMFED--RRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKL--- 88
+SKE+ I+++F+D R +P+SIH I G K G+WFGP +V +V L
Sbjct: 365 SSKEDQLRLIIRLFQDQLRLDSPFSIHNIVQHGCQLFDKRAGDWFGPASVVRVFADLINQ 424
Query: 89 AKYDDWSSIVFHVALDNTLVVNQVKKLCT 117
A S + A+D+ + + V +LC+
Sbjct: 425 AYAMHQSPFRAYQAIDHIIYRDLVAELCS 453
>gi|147862867|emb|CAN81102.1| hypothetical protein VITISV_021940 [Vitis vinifera]
Length = 489
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + ++ Y++IL F D + + +SIH I G + G A G W GP + +
Sbjct: 187 GRSWRKTSHKPMDQDYIEILHHFGDSKASAFSIHNILQAGKAYGLAAGSWVGPYAMCRSW 246
Query: 86 RKLAK 90
LA+
Sbjct: 247 ETLAR 251
>gi|359495820|ref|XP_003635099.1| PREDICTED: cysteine protease ATG4-like [Vitis vinifera]
gi|296086874|emb|CBI33041.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + ++ Y++IL F D + + +SIH I G + G A G W GP + +
Sbjct: 187 GRSWRKTSHKPMDQDYIEILHHFGDSKASAFSIHNILQAGKAYGLAAGSWVGPYAMCRSW 246
Query: 86 RKLAK 90
LA+
Sbjct: 247 ETLAR 251
>gi|71415152|ref|XP_809652.1| AUT2/APG4/ATG4 cysteine peptidase [Trypanosoma cruzi strain CL
Brener]
gi|70874068|gb|EAN87801.1| AUT2/APG4/ATG4 cysteine peptidase, putative [Trypanosoma cruzi]
Length = 357
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
F+G +E + +F D +AP+ IH + G G GEWFGP +A+
Sbjct: 114 FNGGGPHIGSERLQELRARTQTLFCDVPSAPFGIHAVTSEGTKHGVNCGEWFGPTPIAKT 173
Query: 85 LRKL 88
L L
Sbjct: 174 LSAL 177
>gi|111154179|gb|ABH07411.1| autophagin-2 [Trypanosoma cruzi]
Length = 351
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
F+G +E + +F D +AP+ IH + G G GEWFGP +A+
Sbjct: 108 FNGGGPHIGSERLQELRARTQTLFCDVPSAPFGIHAVTSEGTKHGVNCGEWFGPTPIAKT 167
Query: 85 LRKL 88
L L
Sbjct: 168 LSAL 171
>gi|322701885|gb|EFY93633.1| cysteine protease atg4 [Metarhizium acridum CQMa 102]
Length = 255
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + E ++L +F D APYS+H G K GEWFGP+ A+ +
Sbjct: 197 GRDWRRGMLPDRER--RLLALFADDPRAPYSVHNFVRHGEKYCSKYPGEWFGPSATARCI 254
Query: 86 R 86
+
Sbjct: 255 Q 255
>gi|224117658|ref|XP_002331599.1| predicted protein [Populus trichocarpa]
gi|222873995|gb|EEF11126.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ ++ + Y++IL +F D ++ +SIH + G + G A G W GP V
Sbjct: 193 GRSWRKPLDKPLDREYVEILHLFGDSESSAFSIHNLLRAGKAYGLAAGSWVGPYAVCHSW 252
Query: 86 RKLAK 90
L +
Sbjct: 253 ESLVR 257
>gi|401624007|gb|EJS42084.1| atg4p [Saccharomyces arboricola H-6]
Length = 494
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ + + KI+ F D AP+SIH TG K GEWFGP A+ +
Sbjct: 166 GRDFRVDNEKSLKRESKIVTWFNDTPEAPFSIHNFVSTGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>gi|115461386|ref|NP_001054293.1| Os04g0682000 [Oryza sativa Japonica Group]
gi|75143803|sp|Q7XPW8.1|ATG4B_ORYSJ RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B
gi|32488637|emb|CAE03430.1| OSJNBa0032F06.13 [Oryza sativa Japonica Group]
gi|82470053|gb|ABB77259.1| autophagy 4 [Oryza sativa Indica Group]
gi|113565864|dbj|BAF16207.1| Os04g0682000 [Oryza sativa Japonica Group]
gi|215697216|dbj|BAG91210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 183 GRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 242
Query: 86 RKLAK 90
+ L +
Sbjct: 243 QTLVR 247
>gi|260949671|ref|XP_002619132.1| hypothetical protein CLUG_00291 [Clavispora lusitaniae ATCC 42720]
gi|238846704|gb|EEQ36168.1| hypothetical protein CLUG_00291 [Clavispora lusitaniae ATCC 42720]
Length = 340
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 27 GRDWQ--WNVNSKEEAYLKILKMFEDRRTAPYSIHQ-IALTGASEGKA-VGEWFGPNTVA 82
GRD Q + S E KI+++F D T P+S+H I + AS K GEWFGP+ +
Sbjct: 136 GRDHQSPQAIQSAPEKVEKIIQLFGDDYTCPFSLHNFIKVASASPLKVKPGEWFGPSAAS 195
Query: 83 QVLRKL-AKYD 92
+++L AK++
Sbjct: 196 LSIKRLCAKFE 206
>gi|388514549|gb|AFK45336.1| unknown [Lotus japonicus]
Length = 489
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + ++ YL IL+ F D + +SIH + G G AVG W GP + +
Sbjct: 194 GRMWRKTTDKPLDKEYLDILQHFGDSEASSFSIHNLLQAGKGYGLAVGSWVGPYAMCRSW 253
Query: 86 RKLAK 90
LA+
Sbjct: 254 EVLAR 258
>gi|261335715|emb|CBH18709.1| peptidase, putative [Trypanosoma brucei gambiense DAL972]
Length = 348
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 47 MFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK 90
+F D +AP+ IH I G G G WFGP VA V+ L +
Sbjct: 112 LFHDDPSAPFGIHAITNKGVQHGAPCGSWFGPTHVAVVMGALME 155
>gi|74026240|ref|XP_829686.1| peptidase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70835072|gb|EAN80574.1| peptidase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 348
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 47 MFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK 90
+F D +AP+ IH I G G G WFGP VA V+ L +
Sbjct: 112 LFHDDPSAPFGIHAITNKGVQHGAPCGSWFGPTHVAVVMGALME 155
>gi|348529755|ref|XP_003452378.1| PREDICTED: cysteine protease ATG4C-like [Oreochromis niloticus]
Length = 478
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
KE + ++ F D + P +H++ G + GK G+W+GP VA +L+K
Sbjct: 191 KEMYHRTLVSWFGDSPSTPLGLHRLVRLGLTMGKQAGDWYGPAVVAHILKK 241
>gi|222629790|gb|EEE61922.1| hypothetical protein OsJ_16662 [Oryza sativa Japonica Group]
Length = 892
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 183 GRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 242
Query: 86 RKLAK 90
+ L +
Sbjct: 243 QTLVR 247
>gi|365988214|ref|XP_003670938.1| hypothetical protein NDAI_0F03770 [Naumovozyma dairenensis CBS 421]
gi|343769709|emb|CCD25695.1| hypothetical protein NDAI_0F03770 [Naumovozyma dairenensis CBS 421]
Length = 427
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 27 GRDWQWNVNSK---EEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVA 82
GRDW+++ N+ E +I F D P+S+H+ G GK GEWFGP A
Sbjct: 80 GRDWRFDDNTDLKMTEKSNEIASWFMDTPEKPFSLHRFISKGMQLSGKKPGEWFGPAATA 139
Query: 83 QVLRKL 88
+ ++ L
Sbjct: 140 RSIQSL 145
>gi|449676306|ref|XP_002158689.2| PREDICTED: cysteine protease ATG4C-like [Hydra magnipapillata]
Length = 442
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 37 KEEAYLKILKMFEDRRT--APYSIHQIALTGASEGKAVGEWFGPNTVAQVLR---KLAKY 91
K Y IL+ F D + +P+S+H++ G+ K GEW+GP +VA L L +
Sbjct: 164 KNYIYRMILRFFNDENSDNSPFSLHELVRIGS---KKPGEWYGPTSVAHTLSAAVNLTSH 220
Query: 92 DDWSSIVFHVALDNTLVVNQV---KKLCTTNKRKLAKYDDWSSIVFHVAL 138
+ +VA D T+ + V C +K + W S++ V +
Sbjct: 221 PVLDTFRVYVANDCTVYIKDVISTSTKCKNCTKKTCQEKFWRSMLILVPI 270
>gi|147742963|sp|Q2XPP4.2|ATG4B_ORYSI RecName: Full=Cysteine protease ATG4B; AltName:
Full=Autophagy-related protein 4 homolog B;
Short=Protein autophagy 4; AltName: Full=OsAtg4
Length = 478
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 183 GRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 242
Query: 86 RKLAK 90
+ L +
Sbjct: 243 QTLVR 247
>gi|410921904|ref|XP_003974423.1| PREDICTED: cysteine protease ATG4C-like [Takifugu rubripes]
Length = 468
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 26 SGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
+G + V++ + ++ F D +A + +H++ G + GK GEW+GP VA +L
Sbjct: 174 AGSGEEAGVHTDGGFHRTLVSWFGDSPSAQFGLHRMVRLGLAMGKRAGEWYGPAVVAHIL 233
Query: 86 RK 87
+K
Sbjct: 234 KK 235
>gi|50344862|ref|NP_001002103.1| cysteine protease ATG4C [Danio rerio]
gi|47938047|gb|AAH71514.1| Autophagy-related 4C (yeast) [Danio rerio]
Length = 463
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
KE + I+ F D +A I+++ G + GK G+W+GP VA +LRK
Sbjct: 190 KETYHRTIVSWFGDGPSAQLGIYKLVELGMTSGKQAGDWYGPAVVAHILRK 240
>gi|68485712|ref|XP_713234.1| potential autophagy related protease and anchor protein Atg4
[Candida albicans SC5314]
gi|71152285|sp|Q59UG3.1|ATG4_CANAL RecName: Full=Cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|46434715|gb|EAK94117.1| potential autophagy related protease and anchor protein Atg4
[Candida albicans SC5314]
Length = 446
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKLA 89
+I+K+F+D ++P+SIH + V GEWFGPN + +++LA
Sbjct: 168 EIVKLFQDDTSSPFSIHNFIRVASLSPLHVKPGEWFGPNAASLSIKRLA 216
>gi|255711728|ref|XP_002552147.1| KLTH0B08272p [Lachancea thermotolerans]
gi|238933525|emb|CAR21709.1| KLTH0B08272p [Lachancea thermotolerans CBS 6340]
Length = 483
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 43 KILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQVLRKL 88
+++ FEDR +AP+S+H G A K GEWFGP+ ++ ++ L
Sbjct: 176 QLIGWFEDRSSAPFSLHNFVREGNALSRKPPGEWFGPSATSRSIQSL 222
>gi|241958330|ref|XP_002421884.1| cysteine protease, putative [Candida dubliniensis CD36]
gi|223645229|emb|CAX39828.1| cysteine protease, putative [Candida dubliniensis CD36]
Length = 443
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKLAK 90
+I+K+F+D +P+SIH +S V GEWFGPN + +++L
Sbjct: 168 EIVKLFQDDTKSPFSIHNFIRVASSSPLHVKPGEWFGPNAASLSIKRLTN 217
>gi|147742949|sp|A2XHJ5.1|ATG4A_ORYSI RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|125544166|gb|EAY90305.1| hypothetical protein OsI_11880 [Oryza sativa Indica Group]
Length = 473
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQ-WNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 179 GRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 238
Query: 86 RKLAK 90
+ L +
Sbjct: 239 QTLVR 243
>gi|406606786|emb|CCH41822.1| putative cysteine protease atg4 [Wickerhamomyces ciferrii]
Length = 592
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRDW++ E + +I+ F D + P+SIH+I G K GEWFGP+ A+ +
Sbjct: 178 GRDWRYT-GELNEMHNEIVSWFIDCPSHPFSIHKIVDKGKLLSNKKPGEWFGPSAAARSI 236
Query: 86 RKL 88
+ L
Sbjct: 237 QSL 239
>gi|308491308|ref|XP_003107845.1| CRE-ATG-4.2 protein [Caenorhabditis remanei]
gi|308249792|gb|EFO93744.1| CRE-ATG-4.2 protein [Caenorhabditis remanei]
Length = 518
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 17/78 (21%)
Query: 27 GRDWQW--------NVNSKEEAYLK-------ILKMFEDRRTAPYSIHQIALTGASE--G 69
GR+W++ +N +E + + ILK+FED+ ++P IH++ A E
Sbjct: 221 GREWRFVRRKKSYVTINGEETDFDREKIKEWMILKLFEDKPSSPLGIHRMVEISAKEKGK 280
Query: 70 KAVGEWFGPNTVAQVLRK 87
KAVG W+ P+ +++K
Sbjct: 281 KAVGSWYSPSEAVFIMKK 298
>gi|17544636|ref|NP_502208.1| Protein ATG-4.2 [Caenorhabditis elegans]
gi|5824904|emb|CAB54515.1| Protein ATG-4.2 [Caenorhabditis elegans]
Length = 521
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 44 ILKMFEDRRTAPYSIHQ-IALTGASEG-KAVGEWFGPNTVAQVLRK 87
ILK+FED+ TAP IH+ + + +G KAVG W+ P+ +++K
Sbjct: 254 ILKLFEDKPTAPLGIHKMVGIAAMGKGKKAVGSWYSPSEAVFIMKK 299
>gi|342186623|emb|CCC96110.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 388
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 46 KMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
++F D TAP+ IH + G G G WFGP +A+V+ L
Sbjct: 155 RLFYDVPTAPFGIHAMTNEGVRHGVTCGMWFGPTPMAKVIGAL 197
>gi|224994902|gb|ACN76570.1| cysteine proteinase [Triticum aestivum]
Length = 484
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNV-NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ N + + +IL +F D +SIH + G S G A G W GP + +
Sbjct: 186 GRSWRKPAQNPSDPEHTRILHLFGDSEVCAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 245
Query: 86 RKLAK 90
+ L +
Sbjct: 246 QTLIR 250
>gi|218195841|gb|EEC78268.1| hypothetical protein OsI_17962 [Oryza sativa Indica Group]
Length = 912
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 183 GRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 242
Query: 86 RKLAK 90
+ L +
Sbjct: 243 QTLVR 247
>gi|90399070|emb|CAJ86292.1| H0124B04.9 [Oryza sativa Indica Group]
Length = 1216
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 454 GRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 513
Query: 86 RKLAK 90
+ L +
Sbjct: 514 QTLVR 518
>gi|47222154|emb|CAG11580.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 39 EAYLKIL-KMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
EA+ + L F D +A + +H++ G GK GEW+GP VA +L+K
Sbjct: 194 EAFHRTLVSWFGDSPSAQFGLHRMVHLGLEMGKQAGEWYGPAVVAHILKK 243
>gi|422293936|gb|EKU21236.1| cysteine protease family, partial [Nannochloropsis gaditana
CCMP526]
Length = 91
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 41 YLKILKMFEDRRTAP-----YSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA 89
Y ++L F D AP +S+H + G S K GEW+GP TVA +LR LA
Sbjct: 23 YCQLLDSFVD---APGPNHVFSVHNMVQIGMSYDKLPGEWYGPTTVAYILRDLA 73
>gi|308802424|ref|XP_003078525.1| APG4C_XENLA Cysteine protease APG4C (ISS) [Ostreococcus tauri]
gi|116056978|emb|CAL51405.1| APG4C_XENLA Cysteine protease APG4C (ISS) [Ostreococcus tauri]
Length = 424
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 35 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL-AKYDD 93
+ +A IL++F D AP+SIH++ G G WF P+ + + L A++D
Sbjct: 163 RAGSDAQEDILRLFADEVGAPFSIHRVCEKTTEWGAPPGRWFEPSVMCRAFEALVAEHDL 222
Query: 94 WSSIVFHV 101
S + HV
Sbjct: 223 GSELTVHV 230
>gi|432855098|ref|XP_004068071.1| PREDICTED: cysteine protease ATG4C-like [Oryzias latipes]
Length = 482
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 21 EPSSFS-GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPN 79
EP S S G + + KE + I+ F D +A +H++ G + GK G W+GP
Sbjct: 177 EPQSSSQGSAEEAEAHLKEMYHRTIISWFGDTSSALLGLHRLVRLGLTMGKNAGNWYGPA 236
Query: 80 TVAQVLRK 87
VA +L+K
Sbjct: 237 VVAHILKK 244
>gi|75138024|sp|Q75KP8.1|ATG4A_ORYSJ RecName: Full=Cysteine protease ATG4A; AltName:
Full=Autophagy-related protein 4 homolog A
gi|40539014|gb|AAR87271.1| putative autophagy protein (with alternative splicing) [Oryza
sativa Japonica Group]
gi|108708571|gb|ABF96366.1| Peptidase family C54 containing protein, expressed [Oryza sativa
Japonica Group]
gi|125586519|gb|EAZ27183.1| hypothetical protein OsJ_11120 [Oryza sativa Japonica Group]
gi|215769128|dbj|BAH01357.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 474
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 180 GRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 239
Query: 86 RKL 88
+ L
Sbjct: 240 QTL 242
>gi|19115683|ref|NP_594771.1| Atg8 deconjugator Atg4 (predicted) [Schizosaccharomyces pombe
972h-]
gi|62899818|sp|Q9P373.1|ATG4_SCHPO RecName: Full=Probable cysteine protease atg4; AltName:
Full=Autophagy-related protein 4
gi|9588465|emb|CAC00556.1| Atg8 deconjugator Atg4 (predicted) [Schizosaccharomyces pombe]
Length = 320
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKA-VGEWFGPNTVAQVLRKLAKYDDWSSIVFHV 101
+IL +F D +AP+SIHQ G + G+WFGP T + +L+ D + HV
Sbjct: 98 EILALFADEPSAPFSIHQFVTMGKTLCDINPGQWFGPTTSCSCVARLS--DQNPDVPLHV 155
Query: 102 AL---DNTLVVNQVKKL 115
+ N + +Q+ K+
Sbjct: 156 YVARNGNAIYRDQLSKV 172
>gi|448509127|ref|XP_003866066.1| hypothetical protein CORT_0A02350 [Candida orthopsilosis Co 90-125]
gi|380350404|emb|CCG20626.1| hypothetical protein CORT_0A02350 [Candida orthopsilosis Co 90-125]
Length = 419
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 42 LKILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKL 88
L+ILK+F+D A +SIH ++ +V G+WFGPN + +R+L
Sbjct: 172 LEILKLFQDDPNAAFSIHNFIRVASASPLSVKPGQWFGPNAASISIRQL 220
>gi|422295376|gb|EKU22675.1| cysteine protease family, partial [Nannochloropsis gaditana
CCMP526]
Length = 96
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 41 YLKILKMFEDRRTAP-----YSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLA 89
Y ++L F D AP +S+H + G S K GEW+GP TVA +LR LA
Sbjct: 23 YCQLLDSFVD---APGPNHVFSVHNMVQIGMSYDKLPGEWYGPTTVAYILRDLA 73
>gi|365758760|gb|EHN00587.1| Atg4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 485
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ + + +I+ F D AP+S+H TG K GEWFGP A+ +
Sbjct: 157 GRDFRVDEDDDFRRESRIVNWFNDTPEAPFSLHNFVSTGTELSDKRPGEWFGPAATARSI 216
Query: 86 RKL 88
+ L
Sbjct: 217 QYL 219
>gi|118349810|ref|XP_001008186.1| Peptidase family C54 containing protein [Tetrahymena thermophila]
gi|89289953|gb|EAR87941.1| Peptidase family C54 containing protein [Tetrahymena thermophila
SB210]
Length = 343
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 31 QWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGK-AVGEWFGPNTVAQVLRKL 88
Q + + + L I+K F + + P+SI QIA E K +G W+ PN +A L+KL
Sbjct: 77 QLKIQNINDILLFIIKFFIENKDQPFSIQQIAAVALEEFKLEMGFWYSPNRIAYSLKKL 135
>gi|40539015|gb|AAR87272.1| putative autophagy protein (with alternative splicing) [Oryza
sativa Japonica Group]
gi|108708572|gb|ABF96367.1| Peptidase family C54 containing protein, expressed [Oryza sativa
Japonica Group]
Length = 505
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 180 GRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 239
Query: 86 RKL 88
+ L
Sbjct: 240 QTL 242
>gi|367014015|ref|XP_003681507.1| hypothetical protein TDEL_0E00530 [Torulaspora delbrueckii]
gi|359749168|emb|CCE92296.1| hypothetical protein TDEL_0E00530 [Torulaspora delbrueckii]
Length = 460
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N +E Y KI+ F D A +SIH G K GEWFGP ++ +
Sbjct: 141 GRDFRVNQGKDQEEY-KIIDWFADTPQAHFSIHNFVSQGLKLSNKKPGEWFGPAATSRSI 199
Query: 86 RKLAK 90
+ L +
Sbjct: 200 QCLVE 204
>gi|238594668|ref|XP_002393548.1| hypothetical protein MPER_06700 [Moniliophthora perniciosa FA553]
gi|215461192|gb|EEB94478.1| hypothetical protein MPER_06700 [Moniliophthora perniciosa FA553]
Length = 142
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 57 SIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
S+H++AL G GK VG+WFGP+T A ++ L
Sbjct: 111 SVHRMALAGKELGKDVGQWFGPSTAAGAIKTL 142
>gi|238879782|gb|EEQ43420.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 446
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKLA 89
+I+K+F+D ++P+SIH + V GEWFGPN + +++L
Sbjct: 168 EIVKLFQDGTSSPFSIHNFIRVASLSPLHVKSGEWFGPNAASLSIKRLT 216
>gi|68485607|ref|XP_713286.1| potential autophagy related protease and anchor protein Atg4
[Candida albicans SC5314]
gi|46434768|gb|EAK94169.1| potential autophagy related protease and anchor protein Atg4
[Candida albicans SC5314]
Length = 446
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKLA 89
+I+K+F+D ++P+SIH + V GEWFGPN + +++L
Sbjct: 168 EIVKLFQDGTSSPFSIHNFIRVASLSPLHVKPGEWFGPNAASLSIKRLT 216
>gi|357166768|ref|XP_003580841.1| PREDICTED: cysteine protease ATG4B-like [Brachypodium distachyon]
Length = 493
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y++IL +F D +S+H + G S G A G W GP + +
Sbjct: 195 GRSWRKPSQKPCNPEYIRILHLFGDSEVCAFSVHNLLQAGKSYGLAAGSWVGPYAMCRAW 254
Query: 86 RKLAK 90
+ L +
Sbjct: 255 QTLIR 259
>gi|268536436|ref|XP_002633353.1| Hypothetical protein CBG06097 [Caenorhabditis briggsae]
Length = 411
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 17/78 (21%)
Query: 27 GRDWQW--------NVNSKEEAY----LK---ILKMFEDRRTAPYSIHQIALTGASE--G 69
GR+W++ VN +E + +K ILK+FED+ +AP IH++ A E
Sbjct: 114 GRNWRFVRRKKSHVTVNGEETEFDTEKMKEWMILKLFEDKPSAPLGIHKMIEIAAREKGK 173
Query: 70 KAVGEWFGPNTVAQVLRK 87
+AVG W+ P+ +++K
Sbjct: 174 RAVGCWYSPSEAVFIMKK 191
>gi|403345460|gb|EJY72096.1| Cysteine protease family C54 putative [Oxytricha trifallax]
Length = 823
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 33 NVNSKEEA---YLKILKMFEDR---RTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
N++S E+ Y KI+++ D +T +SI IA G K GEW+GP+ + +LR
Sbjct: 427 NLSSTEQKRLNYAKIIQLIHDNDCSQTGAFSIQNIAKMGFCHDKLPGEWYGPHALTIMLR 486
Query: 87 KLAK 90
L +
Sbjct: 487 DLNR 490
>gi|156839152|ref|XP_001643270.1| hypothetical protein Kpol_1015p1 [Vanderwaltozyma polyspora DSM
70294]
gi|166990653|sp|A7TQN1.1|ATG4_VANPO RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|156113873|gb|EDO15412.1| hypothetical protein Kpol_1015p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 411
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GR+++ N E KI+ F D P+S+H G K GEWFGP ++ +
Sbjct: 154 GREFRVNDGDVNEQERKIISWFMDTPDEPFSLHNFVKKGCELSSKKPGEWFGPAATSRSI 213
Query: 86 RKLAK 90
+ L +
Sbjct: 214 QSLVE 218
>gi|328868883|gb|EGG17261.1| autophagy protein 4 [Dictyostelium fasciculatum]
Length = 616
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 35 NSKEEAYLKILKMFEDRRTAP--YSIHQIA-----LTGASEGKA---------------V 72
NSK Y KI+ F D + YSIHQI +T + K V
Sbjct: 261 NSK---YKKIMSWFCDYPSKENFYSIHQIVHKNKIITKYNNSKLKDFDIDSDDQDDWNNV 317
Query: 73 GEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCT 117
EWF P +A VL+ L K SSI +V D + ++V K+CT
Sbjct: 318 DEWFAPTKIAVVLKLLVKSHHSSSIAMYVPSDGVVYKDRVAKICT 362
>gi|384253649|gb|EIE27123.1| peptidase C54 [Coccomyxa subellipsoidea C-169]
Length = 362
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTA--PYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
GR W+ + + E ++L+ F D+ P+SIH + TG + G G+W GP+ +
Sbjct: 71 GRQWRRKLEAAYPEEVAQVLQWFGDQACEQRPFSIHNMCTTGQTHGVKAGDWLGPSGLCH 130
Query: 84 VLRKL 88
L +
Sbjct: 131 TLADM 135
>gi|298712912|emb|CBJ33424.1| Autophagy-related protein 4 [Ectocarpus siliculosus]
Length = 546
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 27 GRDWQWNVNSKEE----AYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNT 80
GR W+ +E Y ++++F D +SIH + G K GEW+GP T
Sbjct: 103 GRSWRVPRTLEERLRVPEYRTLVRLFADHPGEANLFSIHNMCQVGIRYDKLPGEWYGPTT 162
Query: 81 VAQVLRKLAK 90
A VLR +++
Sbjct: 163 AACVLRDISE 172
>gi|221137006|ref|NP_001137489.1| autophagy-related 4b [Zea mays]
gi|194701156|gb|ACF84662.1| unknown [Zea mays]
gi|195657359|gb|ACG48147.1| cysteine protease ATG4B [Zea mays]
gi|216963250|gb|ACJ73914.1| autophagy-related 4b variant 1 [Zea mays]
gi|413920007|gb|AFW59939.1| autophagy 4b variant 1Cysteine protease ATG4B [Zea mays]
Length = 492
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + + Y+++L +F D +SIH + G + G A G W GP + +
Sbjct: 196 GRSWRKPSEKPYDPDYIRVLHLFGDSEACAFSIHNLLQAGRNYGLAAGSWVGPYAMCRAW 255
Query: 86 RKLAK 90
+ L +
Sbjct: 256 QTLIR 260
>gi|294654609|ref|XP_456671.2| DEHA2A07832p [Debaryomyces hansenii CBS767]
gi|218511938|sp|Q6BYP8.2|ATG4_DEBHA RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|199429011|emb|CAG84627.2| DEHA2A07832p [Debaryomyces hansenii CBS767]
Length = 492
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 25 FSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVA 82
F GR + + + + + +I+ MF D AP+S+H + V G+WFGPN +
Sbjct: 168 FLGRGFSYGRD-RSPRHDEIIDMFMDEPRAPFSLHNFIKVASESPLKVKPGQWFGPNAAS 226
Query: 83 QVLRKL 88
+++L
Sbjct: 227 LSIKRL 232
>gi|315259988|gb|ADT92194.1| autophagy-related 4b [Zea mays]
Length = 595
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + + Y+++L +F D +SIH + G + G A G W GP + +
Sbjct: 196 GRSWRKPSEKPYDPDYIRVLHLFGDSEACAFSIHNLLQAGRNYGLAAGSWVGPYAMCRAW 255
Query: 86 RKLAK 90
+ L +
Sbjct: 256 QTLIR 260
>gi|224010768|ref|XP_002294341.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969836|gb|EED88175.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 658
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 56 YSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
YS+HQ+ G G GEW+GP T VLR+L
Sbjct: 243 YSLHQMVAAGLGLGVLPGEWYGPTTACHVLREL 275
>gi|281210274|gb|EFA84441.1| autophagy protein 4 [Polysphondylium pallidum PN500]
Length = 734
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 22/102 (21%)
Query: 41 YLKILKMFED--RRTAPYSIHQIALTGASEGK--------------------AVGEWFGP 78
Y K++ F D R YSIHQI K V EWF P
Sbjct: 343 YRKVMNWFCDLPTREHYYSIHQIVHKNKIIAKYHNSKLKDFDIETDENIDLLNVDEWFAP 402
Query: 79 NTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNK 120
++ VL+ L K S I +V D + + V+KLCT +
Sbjct: 403 TKISVVLKHLLKSHGLSDITMYVPSDGVVYKDYVRKLCTDER 444
>gi|219129924|ref|XP_002185127.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403306|gb|EEC43259.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 557
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 25 FSGRDW---QWNVNSKEEAYLK-ILKMFEDRRTAP---YSIHQIALTGASE-GKAVGEWF 76
F RDW Q +++++++ +L F D ++ YS+H + G S+ K GEW+
Sbjct: 217 FKSRDWRPPQLLARRRQDSFIRSVLTWFADYPSSSESVYSLHNMVAAGLSKYDKLPGEWY 276
Query: 77 GPNTVAQVLRKL 88
GP T V+R L
Sbjct: 277 GPGTACYVMRDL 288
>gi|255722127|ref|XP_002545998.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136487|gb|EER36040.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 444
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 44 ILKMFEDRRTAPYSIHQ-IALTGASEGKA-VGEWFGPNTVAQVLRKLA 89
++ +F+D +++P+SIH I + G S + G+WFGPN + +++L
Sbjct: 169 VIGLFQDNQSSPFSIHNFIKVAGESPLQVKPGQWFGPNAASLSIKRLT 216
>gi|159465677|ref|XP_001691049.1| autophagy protein [Chlamydomonas reinhardtii]
gi|158279735|gb|EDP05495.1| autophagy protein [Chlamydomonas reinhardtii]
Length = 484
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDWQ + EA ++ D AP SIH+I G G G W GP + + L
Sbjct: 105 GRDWQ-RCSDNLEAVRPVVAALLDCAEAPLSIHRICDAGGPAGIVPGRWLGPWMLCKGLE 163
Query: 87 KL 88
L
Sbjct: 164 AL 165
>gi|449442361|ref|XP_004138950.1| PREDICTED: cysteine protease ATG4-like [Cucumis sativus]
gi|449512710|ref|XP_004164121.1| PREDICTED: cysteine protease ATG4-like [Cucumis sativus]
Length = 483
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ ++ Y++IL +F D T+ +SIH + G + A G W GP + +
Sbjct: 188 GRSWRKPSQKPLDKEYVEILHLFGDSETSAFSIHNLLQAGRAYDLAAGSWVGPYAMCRSW 247
Query: 86 RKLAK 90
L +
Sbjct: 248 ETLVR 252
>gi|254567087|ref|XP_002490654.1| Conserved cysteine protease required for autophagy [Komagataella
pastoris GS115]
gi|238030450|emb|CAY68374.1| Conserved cysteine protease required for autophagy [Komagataella
pastoris GS115]
Length = 531
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQV 84
GRDW + + +I+ F D P+SIH G K GEWFGP+ ++
Sbjct: 137 GRDWVFKAKDPANVEHDRIISWFVDIPDEPFSIHNFVQQGIKCCDKKPGEWFGPSAASRA 196
Query: 85 LRKLAK 90
++ L K
Sbjct: 197 IKNLCK 202
>gi|150864470|ref|XP_001383296.2| hypothetical protein PICST_30446 [Scheffersomyces stipitis CBS
6054]
gi|166990661|sp|A3LQU0.2|ATG4_PICST RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|149385726|gb|ABN65267.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 514
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 44 ILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKLAK--YDDWSS 96
I+ +F D AP+S+H +S V GEWFGPN + +++L YD+ +S
Sbjct: 189 IIALFNDTYLAPFSLHNFIRVASSSPLKVKPGEWFGPNAASLSIKRLCDGYYDNSTS 245
>gi|148707987|gb|EDL39934.1| autophagy-related 4B (yeast), isoform CRA_c [Mus musculus]
Length = 128
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIA 62
GRDW+W ++ ++Y +L F DR+ + YSIHQI
Sbjct: 90 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIG 126
>gi|328351041|emb|CCA37441.1| autophagy-related protein 4 [Komagataella pastoris CBS 7435]
Length = 758
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQV 84
GRDW + + +I+ F D P+SIH G K GEWFGP+ ++
Sbjct: 137 GRDWVFKAKDPANVEHDRIISWFVDIPDEPFSIHNFVQQGIKCCDKKPGEWFGPSAASRA 196
Query: 85 LRKLAK 90
++ L K
Sbjct: 197 IKNLCK 202
>gi|62899792|sp|Q8NJJ3.1|ATG4_PICPA RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4; AltName:
Full=Pexophagy zeocin-resistant mutant protein 8
gi|21585563|gb|AAL25849.1| Paz8 [Komagataella pastoris]
Length = 533
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTG-ASEGKAVGEWFGPNTVAQV 84
GRDW + + +I+ F D P+SIH G K GEWFGP+ ++
Sbjct: 137 GRDWVFKAKDPANVEHDRIISWFVDIPDEPFSIHNFVQQGIKCCDKKPGEWFGPSAASRA 196
Query: 85 LRKLAK 90
++ L K
Sbjct: 197 IKNLCK 202
>gi|426230580|ref|XP_004009345.1| PREDICTED: LOW QUALITY PROTEIN: cysteine protease ATG4D [Ovis
aries]
Length = 438
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 17/96 (17%)
Query: 65 GASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKL 123
G + GK G+W+GP+ VA +LRK + + + +V +V+ D T+ V +L +
Sbjct: 200 GRAPGKKAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARL-------V 252
Query: 124 AKYD---DWSSIVFHVALD------NTLVVNQVKKL 150
A+ D +W S+V V + N + V VK+L
Sbjct: 253 ARSDPTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 288
>gi|367008068|ref|XP_003688763.1| hypothetical protein TPHA_0P01710 [Tetrapisispora phaffii CBS 4417]
gi|357527073|emb|CCE66329.1| hypothetical protein TPHA_0P01710 [Tetrapisispora phaffii CBS 4417]
Length = 356
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKA-VGEWFGPNTVAQVLRKLAK 90
+I+++F D P+SIH G VGEWF P+ Q++ KL +
Sbjct: 116 EIIELFVDETKNPFSIHNFITVGKDLNLVKVGEWFSPSITIQIIEKLIE 164
>gi|194696780|gb|ACF82474.1| unknown [Zea mays]
gi|413920008|gb|AFW59940.1| autophagy 4b variant 3 [Zea mays]
Length = 462
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+++L +F D +SIH + G + G A G W GP + +
Sbjct: 166 GRSWRKPSEKPYDPDYIRVLHLFGDSEACAFSIHNLLQAGRNYGLAAGSWVGPYAMCRAW 225
Query: 86 RKLAK 90
+ L +
Sbjct: 226 QTLIR 230
>gi|66359342|ref|XP_626849.1| possible peptidase family C54 [Cryptosporidium parvum Iowa II]
gi|46228139|gb|EAK89038.1| possible peptidase family C54 [Cryptosporidium parvum Iowa II]
Length = 348
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHV 101
KIL F+D +A +SIH + G SE G W GP T + + KL +D SI+ ++
Sbjct: 116 KILNNFQDNESAKFSIHNMVNIGLSEFGIDPTSWIGPTTSSMIANKLI--NDNRSIISNI 173
Query: 102 AL 103
+
Sbjct: 174 QI 175
>gi|353441084|gb|AEQ94126.1| putative cysteine protease [Elaeis guineensis]
Length = 169
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
GR W+ ++ Y++IL +F D +SIH + G + G A EW GP + +
Sbjct: 97 GRSWRKPSQKPHDSKYIEILHLFGDSEACAFSIHNLLEAGKAYGLAAREWVGPYAMCRT 155
>gi|340383455|ref|XP_003390233.1| PREDICTED: cysteine protease ATG4D-like [Amphimedon queenslandica]
Length = 437
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 25 FSGRDWQWN------------VNSKEEAYLKILKMFEDRRT--APYSIHQIALTGASEGK 70
F GRDW+ + V + + IL F D + P+SIH++ G
Sbjct: 142 FLGRDWRLSSSDVTGHKIHRQVKNWNNYVVLILSWFGDSESELCPFSIHRLMEAAYYHGN 201
Query: 71 AVGEWFGPNTVAQVL-----RKLAKYDDWSSIVFHVALDNTLVVNQVKKL 115
G+WFGP+ V+ ++ R L ++ + + +V+ D T+ + V+ +
Sbjct: 202 KPGDWFGPSQVSILIRDCVRRALREHINLQKLNIYVSHDCTVYIKDVQDI 251
>gi|256071261|ref|XP_002571959.1| family C54 unassigned peptidase (C54 family) [Schistosoma mansoni]
gi|353229490|emb|CCD75661.1| family C54 unassigned peptidase (C54 family) [Schistosoma mansoni]
Length = 376
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 25 FSGRDWQWNVNSKEEAY-LKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNTV 81
F GR+W+ N ++ + L+I+K F D +P S+H+ L S+ K GEW GP+++
Sbjct: 91 FLGRNWRLTKNQRDSDFSLQIIKWFNDSWSPFSPLSLHR--LVQMSDRKP-GEWCGPSSI 147
Query: 82 -AQVLRKLAK 90
+ +LR +AK
Sbjct: 148 CSAILRVMAK 157
>gi|216963242|gb|ACJ73913.1| autophagy-related 4a variant 2 [Zea mays]
Length = 429
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ +L +F D +SIH + G + G A G W GP + +
Sbjct: 199 GRSWRKPPEKPYNPDYIGVLHLFGDSEACAFSIHNLLQAGRNYGLAAGSWLGPYAMCRAW 258
Query: 86 RKLAK 90
+ L +
Sbjct: 259 QTLIR 263
>gi|256071263|ref|XP_002571960.1| family C54 unassigned peptidase (C54 family) [Schistosoma
mansoni]
gi|353229491|emb|CCD75662.1| family C54 unassigned peptidase (C54 family) [Schistosoma
mansoni]
Length = 302
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 25 FSGRDWQWNVNSKEEAY-LKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWFGPNTV 81
F GR+W+ N ++ + L+I+K F D +P S+H+ L S+ K GEW GP+++
Sbjct: 17 FLGRNWRLTKNQRDSDFSLQIIKWFNDSWSPFSPLSLHR--LVQMSDRKP-GEWCGPSSI 73
Query: 82 -AQVLRKLAK 90
+ +LR +AK
Sbjct: 74 CSAILRVMAK 83
>gi|444321667|ref|XP_004181489.1| hypothetical protein TBLA_0G00200 [Tetrapisispora blattae CBS 6284]
gi|387514534|emb|CCH61970.1| hypothetical protein TBLA_0G00200 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 33 NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVLRKL 88
N N+K I++ F D P+SIH+ G K GEWFGP+T ++ L
Sbjct: 220 NPNTKNIKEEDIIEWFYDNPNKPFSIHKFVDKGMRISDKKPGEWFGPSTTCTAIQSL 276
>gi|221137004|ref|NP_001137488.1| autophagy-related 4 [Zea mays]
gi|195620628|gb|ACG32144.1| cysteine protease ATG4B [Zea mays]
gi|216963236|gb|ACJ73912.1| autophagy-related 4 variant 1 [Zea mays]
gi|219886349|gb|ACL53549.1| unknown [Zea mays]
gi|414584729|tpg|DAA35300.1| TPA: autophagy 4a variant 2 isoform 1 [Zea mays]
gi|414584730|tpg|DAA35301.1| TPA: autophagy 4a variant 2 isoform 2 [Zea mays]
Length = 492
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAK 90
Y+ +L +F D +SIH + G + G A G W GP + + + L +
Sbjct: 214 YIGVLHLFGDSEACAFSIHNLLQAGRNYGLAAGSWLGPYAMCRAWQTLIR 263
>gi|414869447|tpg|DAA48004.1| TPA: hypothetical protein ZEAMMB73_510335 [Zea mays]
gi|414869466|tpg|DAA48023.1| TPA: hypothetical protein ZEAMMB73_786179 [Zea mays]
Length = 472
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
Y+ +L +F D +SIH + G + G A G W GP + + + L
Sbjct: 84 YIGVLHLFGDSEACAFSIHNLLQAGRNYGLAAGSWLGPYAMCRAWQTL 131
>gi|385305819|gb|EIF49766.1| cysteine protease atg4 [Dekkera bruxellensis AWRI1499]
Length = 476
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 27 GRDWQW----NVNSKEEAYLK------ILKMFEDRRTAPYSIHQIALTGASE-GKAVGEW 75
GR W++ N N + E K I+ F D AP+SI QI G+ K GEW
Sbjct: 168 GRKWRYIPAENPNGETEYAKKYEKQWQIITWFADFPWAPFSIQQIVRYGSEHCNKKPGEW 227
Query: 76 FGPNTVAQVLRKLAK 90
FGP+ ++ + L K
Sbjct: 228 FGPSAASRSIVYLCK 242
>gi|119623097|gb|EAX02692.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_d
[Homo sapiens]
Length = 172
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQI 61
GRDW W ++ + Y +IL+ F DR+ YSIHQ+
Sbjct: 100 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQM 135
>gi|432110194|gb|ELK33968.1| Cysteine protease ATG4A, partial [Myotis davidii]
Length = 256
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIA 62
GRDW W ++ + Y +IL+ F DR+ YSIHQ+
Sbjct: 94 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMG 130
>gi|145553267|ref|XP_001462308.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430147|emb|CAK94935.1| unnamed protein product [Paramecium tetraurelia]
Length = 389
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 54 APYSIHQIALTGASE-GKAVGEWFGPNTVAQVLRKLAKYDDWS-SIVFHVALDNTLVVNQ 111
+P+SI +I + E K+ GEW+ PN + VL+ L +Y + ++ H+ +N +++
Sbjct: 146 SPFSIQKIVVQTKLELQKSPGEWYKPNDILFVLKYLFRYSKYQKNLRMHINHENAFILSD 205
Query: 112 VKKL 115
V L
Sbjct: 206 VISL 209
>gi|431905146|gb|ELK10197.1| Cysteine protease ATG4A [Pteropus alecto]
Length = 342
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQI 61
GRDW W ++ + Y +IL+ F DR+ YSIHQ+
Sbjct: 98 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQM 133
>gi|119623099|gb|EAX02694.1| ATG4 autophagy related 4 homolog A (S. cerevisiae), isoform CRA_e
[Homo sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQI 61
GRDW W ++ + Y +IL+ F DR+ YSIHQ+
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQM 131
>gi|149246610|ref|XP_001527730.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|166990616|sp|A5DSB4.1|ATG4_LODEL RecName: Full=Probable cysteine protease ATG4; AltName:
Full=Autophagy-related protein 4
gi|146447684|gb|EDK42072.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 523
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 36 SKEEAYLKILKMFEDRRTAPYSIHQI--ALTGASEGKAVGEWFGPNTVAQVLRKL 88
+K EA ++++F+D +AP+S+H A S G+WFGP+ + ++KL
Sbjct: 217 TKTEA--DVIELFQDTLSAPFSLHNFIKAANSLSLNIKPGQWFGPSAASLSIKKL 269
>gi|254584596|ref|XP_002497866.1| ZYRO0F15334p [Zygosaccharomyces rouxii]
gi|238940759|emb|CAR28933.1| ZYRO0F15334p [Zygosaccharomyces rouxii]
Length = 489
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GR ++ K E + I+ F D AP+SIH G K GEWFGP ++ +
Sbjct: 158 GRGYRIGSELKPEE-ISIIDWFVDIPDAPFSIHNFVSKGMELSSKRPGEWFGPAATSRSI 216
Query: 86 RKLAK 90
+ L +
Sbjct: 217 QSLIR 221
>gi|47212536|emb|CAF90552.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 27 GRDWQWNVNSKEE--AYLKILKMFEDRRTAPYSIHQI 61
GRDW+W V+ +E+ Y+ IL F D++ + YSIHQI
Sbjct: 116 GRDWRW-VSGEEQRHEYVNILNAFIDKKDSYYSIHQI 151
>gi|344229797|gb|EGV61682.1| hypothetical protein CANTEDRAFT_115142 [Candida tenuis ATCC 10573]
Length = 408
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 42 LKILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKL 88
+++L F+D AP+S+H V G+WFGPN + +++L
Sbjct: 161 IQLLDQFKDSEAAPFSLHNFIRVANESPLQVKPGQWFGPNAASLSIQRL 209
>gi|389614581|dbj|BAM20331.1| chitinase 7, partial [Papilio polytes]
Length = 412
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Query: 22 PSSFSGRDWQWNVNSKEEAYLKILKMF--------EDRRTAPYSIHQIALTGASEGKAVG 73
P+S G+ ++ S AY ++ +M +D PY+IH G + K++
Sbjct: 155 PASGGGKAGEYTKESGFLAYYEVCEMLRNGAAYVWDDEMKVPYAIHGDQWVGFDDEKSIX 214
Query: 74 ---EWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWS 130
W N + DD+S V + L+ ++L ++ K AK DWS
Sbjct: 215 IXMRWIKDNGFGGAMVWTVDMDDFSGDVCGNDVKYPLIGAMREELRGISRGKDAKDVDWS 274
Query: 131 SIVFHVALDNTLVVNQVK 148
++ V +D T +K
Sbjct: 275 TVAESVVIDVTEKPQPIK 292
>gi|413917967|gb|AFW57899.1| hypothetical protein ZEAMMB73_419246 [Zea mays]
Length = 290
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ +L++F D +SIH + + G A G W GP + +
Sbjct: 39 GRSWRKPPEKPYNPDYIGVLRLFGDSEACAFSIHNLLQARRNYGLAAGSWLGPYAMCRAW 98
Query: 86 RKLAK 90
+ L +
Sbjct: 99 QTLIR 103
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,483,671,570
Number of Sequences: 23463169
Number of extensions: 92010705
Number of successful extensions: 208610
Number of sequences better than 100.0: 639
Number of HSP's better than 100.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 207634
Number of HSP's gapped (non-prelim): 876
length of query: 158
length of database: 8,064,228,071
effective HSP length: 120
effective length of query: 38
effective length of database: 9,543,615,087
effective search space: 362657373306
effective search space used: 362657373306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)