BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10446
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q640G7|ATG4B_XENLA Cysteine protease ATG4B OS=Xenopus laevis GN=atg4b PE=2 SV=1
Length = 384
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 69/90 (76%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW+W+ + YL IL F D++ + YSIHQIA G EGK +G+W+GPNTVAQVLR
Sbjct: 93 GRDWRWDKQKPKGEYLNILTAFLDKKDSYYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLR 152
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KLA +D WSSI H+A+DNT+VV+++++LC
Sbjct: 153 KLAVFDQWSSIAVHIAMDNTVVVDEIRRLC 182
>sp|Q5ZIW7|ATG4A_CHICK Cysteine protease ATG4A OS=Gallus gallus GN=ATG4A PE=2 SV=1
Length = 380
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + K+ E Y +IL F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 79 GRDWQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C +
Sbjct: 139 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRS 171
>sp|Q8BGE6|ATG4B_MOUSE Cysteine protease ATG4B OS=Mus musculus GN=Atg4b PE=1 SV=2
Length = 393
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 186
>sp|Q9Y4P1|ATG4B_HUMAN Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B PE=1 SV=2
Length = 393
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>sp|Q6PZ05|ATG4A_BOVIN Cysteine protease ATG4A OS=Bos taurus GN=ATG4A PE=2 SV=1
Length = 398
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>sp|Q6DG88|ATG4B_DANRE Cysteine protease ATG4B OS=Danio rerio GN=atg4b PE=2 SV=2
Length = 394
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ ++ Y+ IL F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDSWSRLAVHVAMDNTVVIEEIKRLC 183
>sp|Q6PZ02|ATG4B_CHICK Cysteine protease ATG4B OS=Gallus gallus GN=ATG4B PE=2 SV=1
Length = 393
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
>sp|Q6PZ03|ATG4B_BOVIN Cysteine protease ATG4B OS=Bos taurus GN=ATG4B PE=2 SV=1
Length = 393
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>sp|Q8WYN0|ATG4A_HUMAN Cysteine protease ATG4A OS=Homo sapiens GN=ATG4A PE=1 SV=1
Length = 398
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>sp|Q5R699|ATG4A_PONAB Cysteine protease ATG4A OS=Pongo abelii GN=ATG4A PE=2 SV=1
Length = 398
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>sp|Q6GPU1|ATG4A_XENLA Cysteine protease ATG4A OS=Xenopus laevis GN=atg4a PE=2 SV=1
Length = 397
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVN-SKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W + + E Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 98 GRDWRWEKHKNHPEEYQQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 157
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+VV +K +C
Sbjct: 158 KKLALFDEWNSLAVYVSMDNTVVVEDIKTMC 188
>sp|Q8C9S8|ATG4A_MOUSE Cysteine protease ATG4A OS=Mus musculus GN=Atg4a PE=2 SV=2
Length = 396
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>sp|Q0U199|ATG4_PHANO Probable cysteine protease ATG4 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=ATG4 PE=3 SV=1
Length = 467
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+W N ++ + +IL +F D AP+SIH+ GA+ GK GEWFGP+ A+ +
Sbjct: 168 GRDWRWQENHADKDHAEILSLFADDPQAPFSIHRFVEHGAAVCGKYPGEWFGPSAAARCI 227
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA + + +V+ D V
Sbjct: 228 QDLANKHREAGLKVYVSGDGADV 250
>sp|A6SDQ3|ATG4_BOTFB Probable cysteine protease atg4 OS=Botryotinia fuckeliana (strain
B05.10) GN=atg4 PE=3 SV=1
Length = 439
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ V+S EE KIL +F D APYSIH+ GAS GK GEWFGP+ A+ +
Sbjct: 177 GREWRRGVSSNEER--KILSLFADDPRAPYSIHKFVEHGASACGKHPGEWFGPSATARCI 234
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ S + ++ D + V
Sbjct: 235 QALSNSQAKSELRVYITGDGSDV 257
>sp|Q5B7L0|ATG4_EMENI Cysteine protease atg4 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg4 PE=3
SV=2
Length = 402
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE K+L +F D AP+SIH GA GK GEWFGP A+ +
Sbjct: 147 GRDWRRGERLEEEG--KLLSLFADSPHAPFSIHSFVKHGADFCGKHPGEWFGPTATARCI 204
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ LA D S++ ++A DN+ V
Sbjct: 205 QGLAARYDQSNLQVYIADDNSDV 227
>sp|A7F045|ATG4_SCLS1 Probable cysteine protease atg4 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=atg4 PE=3 SV=2
Length = 439
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ +S EE KIL +F D APYSIH+ GAS GK GEWFGP+ A+ +
Sbjct: 177 GREWRRGSSSNEER--KILSLFADDPRAPYSIHKFVEHGASACGKHPGEWFGPSAAARCI 234
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L S + ++ D + V
Sbjct: 235 QALTNSQVESELRVYITGDGSDV 257
>sp|Q86TL0|ATG4D_HUMAN Cysteine protease ATG4D OS=Homo sapiens GN=ATG4D PE=2 SV=1
Length = 474
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W S+V V + N + V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKSVVILVPVRLGGETLNPVYVPC 320
Query: 147 VKKL 150
VK+L
Sbjct: 321 VKEL 324
>sp|P0CQ10|ATG4_CRYNJ Cysteine protease ATG4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ATG4 PE=3
SV=1
Length = 1193
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 14 DWKGVTFEPSSFSGRDWQWNVNSKEE--AYLKILKMFEDRRT--APYSIHQIALTGASEG 69
DW+ V P+SFS + + ++ Y ++L F D + P+S+H++AL G G
Sbjct: 591 DWR-VPSTPASFSEATTTQEIAALKDYAKYAQMLSWFLDDPSPLCPFSVHRMALIGKELG 649
Query: 70 KAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
K VGEWFGP+T A L+ LA + A D+ + + V DDW
Sbjct: 650 KEVGEWFGPSTAAGALKTLANSFAPCGVAVATATDSIIYKSDVYTASNLPS------DDW 703
Query: 130 SSI 132
+SI
Sbjct: 704 NSI 706
>sp|P0CQ11|ATG4_CRYNB Cysteine protease ATG4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=ATG4 PE=3 SV=1
Length = 1193
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 14 DWKGVTFEPSSFSGRDWQWNVNSKEE--AYLKILKMFEDRRT--APYSIHQIALTGASEG 69
DW+ V P+SFS + + ++ Y ++L F D + P+S+H++AL G G
Sbjct: 591 DWR-VPSTPASFSEATTTQEIAALKDYAKYAQMLSWFLDDPSPLCPFSVHRMALIGKELG 649
Query: 70 KAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDW 129
K VGEWFGP+T A L+ LA + A D+ + + V DDW
Sbjct: 650 KEVGEWFGPSTAAGALKTLANSFAPCGVAVATATDSIIYKSDVYTASNLPS------DDW 703
Query: 130 SSI 132
+SI
Sbjct: 704 NSI 706
>sp|A2QY50|ATG4_ASPNC Probable cysteine protease atg4 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=atg4 PE=3 SV=1
Length = 404
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ ++L +F D TAP+S+H+ GA S GK GEWFGP+ A+ +
Sbjct: 152 GRDWRRGARFEEES--QLLSLFADTPTAPFSVHRFVKHGAESCGKYPGEWFGPSATAKCI 209
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
L+ ++ +V+ D + V
Sbjct: 210 EALSSQCGNPTLKVYVSNDTSEV 232
>sp|Q1E5M9|ATG4_COCIM Probable cysteine protease ATG4 OS=Coccidioides immitis (strain RS)
GN=ATG4 PE=3 SV=1
Length = 432
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ KEE ++L +F D AP+SIH+ GAS GK GEWFGP+ A+ +
Sbjct: 179 GRDWRRGSKIKEEC--ELLSLFADNPQAPFSIHRFVDYGASACGKHPGEWFGPSATARCI 236
Query: 86 RKLA 89
L+
Sbjct: 237 EALS 240
>sp|A7KAL5|ATG4_PENCW Probable cysteine protease atg4 OS=Penicillium chrysogenum (strain
ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg4 PE=3
SV=1
Length = 401
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +EE+ K++ MF D AP+SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 145 GRDWRRGEKVEEES--KLISMFADHPEAPFSIHRFVNRGAESCGKYPGEWFGPSATAKCI 202
Query: 86 RKLAKYDDWSSIVFHVALDNTLV 108
+ L+ + + ++ D + V
Sbjct: 203 QLLSTQSEVPQLRVYLTNDTSDV 225
>sp|Q684M2|ATG4D_PIG Cysteine protease ATG4D OS=Sus scrofa GN=ATG4D PE=3 SV=1
Length = 469
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 203 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 262
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD---DWSSIVFHVALD------NTLVVNQ 146
+V +V+ D T+ V +L +A+ D +W ++V V + N + V
Sbjct: 263 RLVVYVSQDCTVYKADVARL-------VARPDPTAEWKAVVILVPVRLGGETLNPVYVPC 315
Query: 147 VKKL 150
VK+L
Sbjct: 316 VKEL 319
>sp|Q8BGV9|ATG4D_MOUSE Cysteine protease ATG4D OS=Mus musculus GN=Atg4d PE=1 SV=1
Length = 474
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 41 YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSSIVF 99
+ +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V
Sbjct: 212 HRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVV 271
Query: 100 HVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHVALD------NTLVVNQVKKL 150
+V+ D T+ V +L + +W S+V V + N + V VK+L
Sbjct: 272 YVSQDCTVYKADVARLLSWPD----PTAEWKSVVILVPVRLGGETLNPVYVPCVKEL 324
>sp|Q2U5B0|ATG4_ASPOR Probable cysteine protease atg4 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=atg4 PE=3 SV=2
Length = 407
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ ++EEA ++L +F D AP SIH+ GA S GK GEWFGP+ A+ +
Sbjct: 155 GRDWRRGDKAEEEA--RLLSLFADHPDAPLSIHRFVKYGAESCGKHPGEWFGPSATARCI 212
Query: 86 RKLA 89
L+
Sbjct: 213 EALS 216
>sp|Q523C3|ATG4_MAGO7 Cysteine protease ATG4 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=ATG4 PE=3 SV=2
Length = 491
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ EE K+L +F D APYSIH GA++ GK GEWFGP+ A+ +
Sbjct: 225 GRSWRRGQAPDEER--KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCI 282
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 283 HALANATENSFRVY 296
>sp|Q75E61|ATG4_ASHGO Probable cysteine protease ATG4 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG4
PE=3 SV=1
Length = 521
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ + N+ E L+I+K FED P+S+H+ G S GK GEWFGP+ ++ +
Sbjct: 196 GRDFRIDDNAANEHELRIIKWFEDDPKYPFSLHKFVQEGFSLSGKKPGEWFGPSATSRSI 255
Query: 86 RKL-AKY 91
+ L AK+
Sbjct: 256 QALVAKF 262
>sp|Q4U3V5|ATG4_CRYPA Probable cysteine protease ATG4 OS=Cryphonectria parasitica GN=ATG4
PE=2 SV=1
Length = 459
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ +++E +IL F D APYS+H GA + GK GEWFGP+ A+ +
Sbjct: 197 GRDWRRGKAARQER--EILARFADDPRAPYSLHNFVRHGAVACGKFPGEWFGPSATARCI 254
Query: 86 RKLAKYDDWSSIVFHVA 102
+ LA ++ S V+
Sbjct: 255 QALANSNESSLRVYSTG 271
>sp|Q9M1Y0|ATG4B_ARATH Cysteine protease ATG4b OS=Arabidopsis thaliana GN=ATG4B PE=1 SV=1
Length = 477
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 27 GRDWQW-NVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + +E YL+IL++F D + +SIH + L G S G A G W GP V +
Sbjct: 192 GRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSW 251
Query: 86 RKLAK 90
LA+
Sbjct: 252 ESLAR 256
>sp|Q96DT6|ATG4C_HUMAN Cysteine protease ATG4C OS=Homo sapiens GN=ATG4C PE=2 SV=1
Length = 458
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYDDW 94
E + KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++ D
Sbjct: 194 EVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDL 253
Query: 95 SSIVFHVALDNTLVVNQV 112
I +VA D T+ + V
Sbjct: 254 QGITIYVAQDCTVYNSDV 271
>sp|Q8S929|ATG4A_ARATH Cysteine protease ATG4a OS=Arabidopsis thaliana GN=ATG4A PE=2 SV=1
Length = 467
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W E+ YL+ L+ F D + +SIH + + GAS G A G W GP + +
Sbjct: 189 GRAWTKKSELPEQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWE 248
Query: 87 KLA 89
LA
Sbjct: 249 SLA 251
>sp|Q811C2|ATG4C_MOUSE Cysteine protease ATG4C OS=Mus musculus GN=Atg4c PE=2 SV=2
Length = 458
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 252 DLQGLTIYVAQDCTVYNSDV 271
>sp|A7KAI3|ATG4_PICAN Probable cysteine protease ATG4 OS=Pichia angusta GN=ATG4 PE=3 SV=1
Length = 509
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GR W+++ + + +I+ F D TAP+SIH GA+ GK GEWFGP+ A+ +
Sbjct: 149 GRGWRYDQTRECAKHAEIVSWFVDIPTAPFSIHNFVEQGANCAGKKPGEWFGPSAAARSI 208
Query: 86 RKL--AKYDDWSSIVFHVA 102
+ L A YD V+ A
Sbjct: 209 QVLCEANYDKTGLKVYFTA 227
>sp|A1CJ08|ATG4_ASPCL Probable cysteine protease atg4 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=atg4 PE=3 SV=1
Length = 400
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ + +EA ++L F D AP+SIH+ GA K GEWFGP+ A+ +
Sbjct: 150 GRDWRRGTEAGKEA--QLLHQFADHPEAPFSIHRFVQHGAEFCNKYPGEWFGPSATARCI 207
Query: 86 RKLAKYDDWSSIVFHVALD 104
+ L S + ++ D
Sbjct: 208 QALVAQQGSSELRVYITDD 226
>sp|Q7S3X7|ATG4_NEUCR Probable cysteine protease atg-4 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=atg-4 PE=3 SV=1
Length = 506
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR+W+ + E I+ +F D APYS+H GA+ GK GEWFGP+ A+ +
Sbjct: 245 GREWRRGTDLDAEK--DIIALFADDPRAPYSLHNFVKYGATACGKYPGEWFGPSATARCI 302
Query: 86 RKLA 89
+ LA
Sbjct: 303 QALA 306
>sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4 OS=Medicago truncatula GN=ATG4 PE=3 SV=1
Length = 487
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ V+ ++ Y+ IL++F D A +SIH + G G AVG W GP + +
Sbjct: 193 GRSWRKTVDKPVDKEYIDILQLFGDSEAAAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTW 252
Query: 86 RKLAK 90
LA+
Sbjct: 253 EVLAR 257
>sp|Q68EP9|ATG4C_XENTR Cysteine protease ATG4C OS=Xenopus tropicalis GN=atg4c PE=2 SV=1
Length = 450
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 35 NSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD-- 92
++ E+ + KI+ F D A + +HQ+ G + GK G+W+GP V+ +LRK +
Sbjct: 187 SNSEDFHQKIISWFADYPLAYFGLHQLVKLGKNSGKVAGDWYGPAVVSHLLRKAIEESSD 246
Query: 93 -DWSSIVFHVALDNTLVVNQVKKL 115
+ I +VA D T+ V L
Sbjct: 247 PELQGITIYVAQDCTIYSADVYDL 270
>sp|Q5XH30|ATG4C_XENLA Cysteine protease ATG4C OS=Xenopus laevis GN=atg4c PE=2 SV=1
Length = 450
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKYD---DW 94
E+ + KI+ F D A + +HQ+ G + GK G+W+GP V+ +LRK + +
Sbjct: 190 EDLHRKIISWFADYPLAYFGLHQLVKLGKNSGKVAGDWYGPAVVSHLLRKAIEESSDPEL 249
Query: 95 SSIVFHVALDNTLVVNQVKKL-CTTNKRK 122
I +VA D T+ V L C K
Sbjct: 250 QGITIYVAQDCTIYNADVYDLQCNKGNEK 278
>sp|Q2HH40|ATG4_CHAGB Probable cysteine protease ATG4 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=ATG4 PE=3 SV=2
Length = 448
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGA-SEGKAVGEWFGPNTVAQVL 85
GRDW+ + E I+ +F D APYS+ GA + GK GEWFGP+ A+ +
Sbjct: 187 GRDWRRTTDPGAER--NIVALFADDARAPYSLQNFVKHGAIACGKHPGEWFGPSATARCI 244
Query: 86 RKLA 89
+ LA
Sbjct: 245 QALA 248
>sp|Q68FJ9|ATG4D_XENLA Cysteine protease ATG4D OS=Xenopus laevis GN=atg4d PE=2 SV=1
Length = 469
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 38 EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK-LAKYDDWSS 96
++ + I++ F D +P+ +HQ+ G+ GK G+W+GP+ VA +++K + +
Sbjct: 204 DQVHRNIMRWFSDHPGSPFGLHQLVTLGSIFGKKAGDWYGPSIVAHIIKKAIETSSEVPE 263
Query: 97 IVFHVALDNTLVVNQVKKL 115
+ +V+ D T+ +++L
Sbjct: 264 LSVYVSQDCTVYKADIEQL 282
>sp|Q86ZL5|ATG4_PODAS Probable cysteine protease ATG4 OS=Podospora anserina GN=ATG4 PE=3
SV=1
Length = 500
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 24 SFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVA 82
S +GR W+ N E +I+ +F D APYSI GA+ GK GEWFGP+ A
Sbjct: 244 SRAGRAWRRTTNPDIER--EIVCLFADDPRAPYSIQNFVNHGAAACGKYPGEWFGPSATA 301
Query: 83 QVLRKLAKY 91
+ + L Y
Sbjct: 302 RCIHSLRVY 310
>sp|P53867|ATG4_YEAST Cysteine protease ATG4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ATG4 PE=1 SV=2
Length = 494
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>sp|A6ZRL7|ATG4_YEAS7 Cysteine protease ATG4 OS=Saccharomyces cerevisiae (strain YJM789)
GN=ATG4 PE=3 SV=1
Length = 494
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>sp|Q7XPW8|ATG4B_ORYSJ Cysteine protease ATG4B OS=Oryza sativa subsp. japonica GN=ATG4B
PE=2 SV=1
Length = 478
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 183 GRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 242
Query: 86 RKLAK 90
+ L +
Sbjct: 243 QTLVR 247
>sp|Q2XPP4|ATG4B_ORYSI Cysteine protease ATG4B OS=Oryza sativa subsp. indica GN=ATG4B PE=1
SV=2
Length = 478
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 183 GRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAW 242
Query: 86 RKLAK 90
+ L +
Sbjct: 243 QTLVR 247
>sp|Q59UG3|ATG4_CANAL Cysteine protease ATG4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ATG4 PE=3 SV=1
Length = 446
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAV--GEWFGPNTVAQVLRKLA 89
+I+K+F+D ++P+SIH + V GEWFGPN + +++LA
Sbjct: 168 EIVKLFQDDTSSPFSIHNFIRVASLSPLHVKPGEWFGPNAASLSIKRLA 216
>sp|A2XHJ5|ATG4A_ORYSI Cysteine protease ATG4A OS=Oryza sativa subsp. indica GN=ATG4A PE=3
SV=1
Length = 473
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 GRDWQ-WNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 179 GRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 238
Query: 86 RKLAK 90
+ L +
Sbjct: 239 QTLVR 243
>sp|Q75KP8|ATG4A_ORYSJ Cysteine protease ATG4A OS=Oryza sativa subsp. japonica GN=ATG4A
PE=3 SV=1
Length = 474
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ Y+ IL MF D +SIH + G S G A G W GP + +
Sbjct: 180 GRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAW 239
Query: 86 RKL 88
+ L
Sbjct: 240 QTL 242
>sp|Q9P373|ATG4_SCHPO Probable cysteine protease atg4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=atg4 PE=3 SV=1
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKA-VGEWFGPNTVAQVLRKLAKYDDWSSIVFHV 101
+IL +F D +AP+SIHQ G + G+WFGP T + +L+ D + HV
Sbjct: 98 EILALFADEPSAPFSIHQFVTMGKTLCDINPGQWFGPTTSCSCVARLS--DQNPDVPLHV 155
Query: 102 AL---DNTLVVNQVKKL 115
+ N + +Q+ K+
Sbjct: 156 YVARNGNAIYRDQLSKV 172
>sp|A7TQN1|ATG4_VANPO Probable cysteine protease ATG4 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=ATG4 PE=3 SV=1
Length = 411
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GR+++ N E KI+ F D P+S+H G K GEWFGP ++ +
Sbjct: 154 GREFRVNDGDVNEQERKIISWFMDTPDEPFSLHNFVKKGCELSSKKPGEWFGPAATSRSI 213
Query: 86 RKLAK 90
+ L +
Sbjct: 214 QSLVE 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,169,690
Number of Sequences: 539616
Number of extensions: 2138157
Number of successful extensions: 4452
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4361
Number of HSP's gapped (non-prelim): 79
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)