Your job contains 1 sequence.
>psy10446
MCLISPKDQDFLIDWKGVTFEPSSFSGRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQ
IALTGASEGKAVGEWFGPNTVAQVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNK
RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRYI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10446
(158 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5ZIW7 - symbol:ATG4A "Cysteine protease ATG4A"... 297 2.5e-26 1
UNIPROTKB|C9J3C0 - symbol:ATG4B "Cysteine protease ATG4B"... 296 3.2e-26 1
UNIPROTKB|F5H7P2 - symbol:ATG4B "Cysteine protease ATG4B"... 296 3.2e-26 1
UNIPROTKB|F8WD71 - symbol:ATG4B "Cysteine protease ATG4B"... 296 3.2e-26 1
UNIPROTKB|Q9Y4P1 - symbol:ATG4B "Cysteine protease ATG4B"... 296 3.2e-26 1
MGI|MGI:1913865 - symbol:Atg4b "autophagy related 4B, cys... 296 3.2e-26 1
ZFIN|ZDB-GENE-050522-430 - symbol:atg4a "ATG4 autophagy r... 292 8.4e-26 1
UNIPROTKB|F1LRG2 - symbol:Atg4b "Protein Atg4b" species:1... 291 1.1e-25 1
FB|FBgn0031298 - symbol:Atg4 "Autophagy-specific gene 4" ... 290 1.4e-25 1
UNIPROTKB|A6QLH1 - symbol:ATG4A "ATG4 autophagy related 4... 290 1.4e-25 1
UNIPROTKB|Q6PZ05 - symbol:ATG4A "Cysteine protease ATG4A"... 290 1.4e-25 1
UNIPROTKB|F1NW36 - symbol:ATG4B "Cysteine protease ATG4B"... 289 1.8e-25 1
UNIPROTKB|Q6PZ02 - symbol:ATG4B "Cysteine protease ATG4B"... 289 1.8e-25 1
ZFIN|ZDB-GENE-040917-3 - symbol:atg4b "ATG4 autophagy rel... 289 1.8e-25 1
UNIPROTKB|F1MJZ9 - symbol:ATG4B "Cysteine protease ATG4B"... 286 3.6e-25 1
UNIPROTKB|Q6PZ03 - symbol:ATG4B "Cysteine protease ATG4B"... 286 3.6e-25 1
UNIPROTKB|F1PAF7 - symbol:ATG4B "Uncharacterized protein"... 286 3.6e-25 1
UNIPROTKB|F5H3G3 - symbol:ATG4A "Cysteine protease ATG4A"... 286 3.6e-25 1
UNIPROTKB|H7BYM2 - symbol:ATG4A "Cysteine protease ATG4A"... 286 3.6e-25 1
UNIPROTKB|Q8WYN0 - symbol:ATG4A "Cysteine protease ATG4A"... 286 3.6e-25 1
RGD|1596915 - symbol:Atg4al1 "autophagy related 4A, cyste... 283 7.6e-25 1
UNIPROTKB|F1RXI5 - symbol:LOC100156732 "Uncharacterized p... 280 1.6e-24 1
UNIPROTKB|K7GK67 - symbol:LOC100156732 "Uncharacterized p... 280 1.6e-24 1
UNIPROTKB|C9JQ72 - symbol:ATG4B "Cysteine protease ATG4B"... 279 2.0e-24 1
UNIPROTKB|E2RLY1 - symbol:ATG4A "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|C9JVD5 - symbol:ATG4B "Cysteine protease ATG4B"... 274 6.8e-24 1
UNIPROTKB|K7GPU1 - symbol:LOC100156732 "Uncharacterized p... 269 2.3e-23 1
WB|WBGene00013595 - symbol:atg-4.1 species:6239 "Caenorha... 264 2.2e-22 1
UNIPROTKB|Q9NA30 - symbol:atg-4.1 "Protein ATG-4.1, isofo... 264 2.2e-22 1
UNIPROTKB|F1LX10 - symbol:F1LX10 "Uncharacterized protein... 211 3.2e-17 1
UNIPROTKB|K7GM02 - symbol:LOC100156732 "Uncharacterized p... 160 8.2e-12 1
DICTYBASE|DDB_G0283753 - symbol:DDB_G0283753 species:4468... 155 2.8e-10 1
ASPGD|ASPL0000035892 - symbol:AN3470 species:162425 "Emer... 149 7.2e-10 1
UNIPROTKB|Q86TL0 - symbol:ATG4D "Cysteine protease ATG4D"... 137 7.9e-10 2
MGI|MGI:2444308 - symbol:Atg4d "autophagy related 4D, cys... 132 1.7e-09 2
UNIPROTKB|E2RDP2 - symbol:ATG4D "Uncharacterized protein"... 133 2.1e-09 2
UNIPROTKB|F1S3M2 - symbol:ATG4D "Cysteine protease ATG4D"... 131 2.7e-09 2
UNIPROTKB|Q684M2 - symbol:ATG4D "Cysteine protease ATG4D"... 131 2.7e-09 2
UNIPROTKB|F1N5L1 - symbol:ATG4D "Uncharacterized protein"... 129 5.6e-09 2
MGI|MGI:2651854 - symbol:Atg4c "autophagy related 4C, cys... 126 1.1e-08 2
UNIPROTKB|C9J1C1 - symbol:ATG4B "Cysteine protease ATG4B"... 127 2.6e-08 1
UNIPROTKB|E2R5A4 - symbol:ATG4C "Uncharacterized protein"... 135 3.0e-08 1
UNIPROTKB|F1MJ23 - symbol:ATG4C "Uncharacterized protein"... 134 3.9e-08 1
UNIPROTKB|Q523C3 - symbol:ATG4 "Cysteine protease ATG4" s... 128 1.9e-07 1
UNIPROTKB|Q96DT6 - symbol:ATG4C "Cysteine protease ATG4C"... 126 2.8e-07 1
FB|FBgn0038325 - symbol:CG6194 species:7227 "Drosophila m... 128 3.0e-07 1
UNIPROTKB|F1S810 - symbol:ATG4C "Uncharacterized protein"... 125 3.6e-07 1
TAIR|locus:2080447 - symbol:AT3G59950 species:3702 "Arabi... 123 6.3e-07 1
UNIPROTKB|E1BS34 - symbol:ATG4C "Uncharacterized protein"... 118 2.1e-06 1
TAIR|locus:2051754 - symbol:AT2G44140 "AT2G44140" species... 118 2.1e-06 1
RGD|1598323 - symbol:Atg4c "autophagy related 4C, cystein... 116 3.1e-06 1
SGD|S000005167 - symbol:ATG4 "Conserved cysteine protease... 108 0.00030 1
ZFIN|ZDB-GENE-040625-84 - symbol:atg4c "autophagy-related... 98 0.00099 2
>UNIPROTKB|Q5ZIW7 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536 EMBL:AJ720667
IPI:IPI00596391 RefSeq:NP_001258916.1 RefSeq:XP_003641164.1
UniGene:Gga.53916 ProteinModelPortal:Q5ZIW7 SMR:Q5ZIW7
GeneID:772074 KEGG:gga:772074 InParanoid:Q5ZIW7 Uniprot:Q5ZIW7
Length = 380
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 51/91 (56%), Positives = 70/91 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDWQW + K+ E Y +IL F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 79 GRDWQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 139 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 169
>UNIPROTKB|C9J3C0 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 IPI:IPI01018366 HGNC:HGNC:20790
ChiTaRS:ATG4B ProteinModelPortal:C9J3C0 SMR:C9J3C0 STRING:C9J3C0
Ensembl:ENST00000429899 ArrayExpress:C9J3C0 Bgee:C9J3C0
Uniprot:C9J3C0
Length = 147
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 48/94 (51%), Positives = 72/94 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>UNIPROTKB|F5H7P2 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00937313
ProteinModelPortal:F5H7P2 SMR:F5H7P2 PRIDE:F5H7P2
Ensembl:ENST00000474739 UCSC:uc010zox.2 ArrayExpress:F5H7P2
Bgee:F5H7P2 Uniprot:F5H7P2
Length = 379
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 48/94 (51%), Positives = 72/94 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 79 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 138
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 139 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 172
Score = 108 (43.1 bits), Expect = 0.00020, P = 0.00020
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 139 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 172
>UNIPROTKB|F8WD71 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AC133528 IPI:IPI00941681 HGNC:HGNC:20790 ChiTaRS:ATG4B
ProteinModelPortal:F8WD71 SMR:F8WD71 PRIDE:F8WD71
Ensembl:ENST00000396411 ArrayExpress:F8WD71 Bgee:F8WD71
Uniprot:F8WD71
Length = 319
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 48/94 (51%), Positives = 72/94 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 112
>UNIPROTKB|Q9Y4P1 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006508 "proteolysis" evidence=IDA] [GO:0008234
"cysteine-type peptidase activity" evidence=IDA] [GO:0006914
"autophagy" evidence=IGI] [GO:0000045 "autophagic vacuole assembly"
evidence=IGI] [GO:0010508 "positive regulation of autophagy"
evidence=IDA] [GO:0004175 "endopeptidase activity" evidence=IDA]
EMBL:AJ504652 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 GO:GO:0045732
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 EMBL:AB066215
EMBL:AB023160 EMBL:AK027332 EMBL:AK027462 EMBL:AK027763
EMBL:AK125277 EMBL:AL080168 EMBL:AC133528 EMBL:BC000719
IPI:IPI00554649 IPI:IPI00647200 IPI:IPI00746254 IPI:IPI00941681
IPI:IPI01018366 PIR:T12492 RefSeq:NP_037457.3 RefSeq:NP_847896.1
UniGene:Hs.283610 PDB:2CY7 PDB:2D1I PDB:2Z0D PDB:2Z0E PDB:2ZZP
PDBsum:2CY7 PDBsum:2D1I PDBsum:2Z0D PDBsum:2Z0E PDBsum:2ZZP
ProteinModelPortal:Q9Y4P1 SMR:Q9Y4P1 IntAct:Q9Y4P1
MINT:MINT-1414043 STRING:Q9Y4P1 PhosphoSite:Q9Y4P1 DMDM:296434400
PaxDb:Q9Y4P1 PRIDE:Q9Y4P1 DNASU:23192 Ensembl:ENST00000402096
Ensembl:ENST00000404914 Ensembl:ENST00000405546 GeneID:23192
KEGG:hsa:23192 UCSC:uc002wbu.3 UCSC:uc002wbv.3 UCSC:uc002wbw.3
GeneCards:GC02P242578 H-InvDB:HIX0180188 HGNC:HGNC:20790
HPA:CAB037195 MIM:611338 neXtProt:NX_Q9Y4P1 PharmGKB:PA134898340
BindingDB:Q9Y4P1 ChEMBL:CHEMBL1741221 ChiTaRS:ATG4B
EvolutionaryTrace:Q9Y4P1 GenomeRNAi:23192 NextBio:44679
ArrayExpress:Q9Y4P1 Bgee:Q9Y4P1 CleanEx:HS_ATG4B
Genevestigator:Q9Y4P1 GermOnline:ENSG00000168397 Uniprot:Q9Y4P1
Length = 393
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 48/94 (51%), Positives = 72/94 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
Score = 108 (43.1 bits), Expect = 0.00022, P = 0.00022
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC T+
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTS 186
>MGI|MGI:1913865 [details] [associations]
symbol:Atg4b "autophagy related 4B, cysteine peptidase"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0004175 "endopeptidase activity"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006914
"autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=IDA;TAS] [GO:0008233 "peptidase activity" evidence=IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=ISO;TAS]
[GO:0010508 "positive regulation of autophagy" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=ISO] MGI:MGI:1913865
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0006914 GO:GO:0006508 GO:GO:0045732 GO:GO:0004197
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192
OrthoDB:EOG4JWVDK GeneTree:ENSGT00530000063000 EMBL:AJ504653
EMBL:AK028712 EMBL:AK031570 EMBL:AK075796 EMBL:AK088811
EMBL:BC027184 EMBL:AK129242 IPI:IPI00387185 RefSeq:NP_777363.1
UniGene:Mm.29087 ProteinModelPortal:Q8BGE6 SMR:Q8BGE6 STRING:Q8BGE6
PhosphoSite:Q8BGE6 PaxDb:Q8BGE6 PRIDE:Q8BGE6
Ensembl:ENSMUST00000027502 GeneID:66615 KEGG:mmu:66615
UCSC:uc007cej.1 InParanoid:Q8BGE6 NextBio:322176 Bgee:Q8BGE6
CleanEx:MM_ATG4B Genevestigator:Q8BGE6
GermOnline:ENSMUSG00000026280 Uniprot:Q8BGE6
Length = 393
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 48/94 (51%), Positives = 71/94 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 186
Score = 108 (43.1 bits), Expect = 0.00022, P = 0.00022
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC N
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRAN 186
>ZFIN|ZDB-GENE-050522-430 [details] [associations]
symbol:atg4a "ATG4 autophagy related 4 homolog A
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-050522-430
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201
HOVERGEN:HBG050536 OrthoDB:EOG4M91RH GeneTree:ENSGT00530000063000
EMBL:CU571325 EMBL:FP102106 EMBL:BC095617 IPI:IPI00483558
RefSeq:NP_001019605.1 UniGene:Dr.91549 SMR:Q4VBK1
Ensembl:ENSDART00000026666 GeneID:554140 KEGG:dre:554140
InParanoid:Q4VBK1 NextBio:20880699 Uniprot:Q4VBK1
Length = 375
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 24 SFSGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVA 82
S GRDW+W+ + + Y +IL F D++ + YSIHQ+A G EGK+VGEW+GPNTVA
Sbjct: 90 SHLGRDWRWDPEKHQPKEYQRILDCFLDKKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVA 149
Query: 83 QVLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRKLAKYD--DWSSIVFHVAL 138
QVL+KLA +DDW+S+ +V++DNT+V+ +KKLC +L DW ++ + L
Sbjct: 150 QVLKKLALFDDWNSLSVYVSMDNTVVIEDIKKLCVRADLQLQSQQPLDWRPLLLVIPL 207
>UNIPROTKB|F1LRG2 [details] [associations]
symbol:Atg4b "Protein Atg4b" species:10116 "Rattus
norvegicus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
RGD:1309664 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:AVCFLCK IPI:IPI00363207
PRIDE:F1LRG2 Ensembl:ENSRNOT00000025529 ArrayExpress:F1LRG2
Uniprot:F1LRG2
Length = 394
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 47/91 (51%), Positives = 70/91 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 94 GRDWRWTQRKRQPDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 153
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WSS+ H+A+DNT+V+ ++++LC
Sbjct: 154 KKLAVFDTWSSLAVHIAMDNTVVMEEIRRLC 184
>FB|FBgn0031298 [details] [associations]
symbol:Atg4 "Autophagy-specific gene 4" species:7227
"Drosophila melanogaster" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0010506 "regulation of autophagy"
evidence=IMP] Pfam:PF03416 GO:GO:0005737 EMBL:AE014134
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AY058573 RefSeq:NP_608563.1
UniGene:Dm.13477 SMR:Q9VPW2 IntAct:Q9VPW2 MINT:MINT-754833
STRING:Q9VPW2 MEROPS:C54.A04 EnsemblMetazoa:FBtr0077953
GeneID:33283 KEGG:dme:Dmel_CG4428 UCSC:CG4428-RA CTD:33283
FlyBase:FBgn0031298 InParanoid:Q9VPW2 OMA:AVCFLCK OrthoDB:EOG4FXPQ5
GenomeRNAi:33283 NextBio:782843 Uniprot:Q9VPW2
Length = 411
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GRDW W + ++ YLKI+ FED R + YSIHQIA G S+ KAVGEW GPNTVAQ+L+
Sbjct: 117 GRDWFWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILK 176
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
KL ++DDWSS+ HVA+D+T+V++ V C
Sbjct: 177 KLVRFDDWSSLAIHVAMDSTVVLDDVYASC 206
>UNIPROTKB|A6QLH1 [details] [associations]
symbol:ATG4A "ATG4 autophagy related 4 homolog A (S.
cerevisiae)" species:9913 "Bos taurus" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 IPI:IPI00693458 UniGene:Bt.13730
HOVERGEN:HBG050536 OMA:DIKKMCC GeneTree:ENSGT00530000063000
EMBL:DAAA02071498 EMBL:BC147962 SMR:A6QLH1
Ensembl:ENSBTAT00000018239 InParanoid:A6QLH1 Uniprot:A6QLH1
Length = 398
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 49/93 (52%), Positives = 70/93 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>UNIPROTKB|Q6PZ05 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY570549 IPI:IPI00693458
RefSeq:NP_001001171.1 UniGene:Bt.13730 ProteinModelPortal:Q6PZ05
SMR:Q6PZ05 MEROPS:C54.002 GeneID:408003 KEGG:bta:408003 CTD:115201
HOVERGEN:HBG050536 InParanoid:Q6PZ05 OrthoDB:EOG4M91RH
NextBio:20818623 Uniprot:Q6PZ05
Length = 398
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 49/93 (52%), Positives = 70/93 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
+KLA +D+W+S+ +V++DNT+V+ +KK+C T
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRT 188
>UNIPROTKB|F1NW36 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 IPI:IPI00576723 GeneTree:ENSGT00530000063000
OMA:AVCFLCK EMBL:AADN02024262 Ensembl:ENSGALT00000010179
Uniprot:F1NW36
Length = 391
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 47/94 (50%), Positives = 71/94 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 90 GRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 149
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 150 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 183
Score = 110 (43.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 150 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 183
>UNIPROTKB|Q6PZ02 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 eggNOG:NOG239662
HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK
EMBL:AY570552 EMBL:AJ720212 IPI:IPI00576723 IPI:IPI00585227
RefSeq:NP_998738.1 UniGene:Gga.16354 ProteinModelPortal:Q6PZ02
SMR:Q6PZ02 STRING:Q6PZ02 GeneID:404750 KEGG:gga:404750
InParanoid:Q6PZ02 NextBio:20817710 Uniprot:Q6PZ02
Length = 393
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 47/94 (50%), Positives = 71/94 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ + Y +L F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 92 GRDWRWIKGKRQTDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 151
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
Score = 110 (43.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 16/34 (47%), Positives = 28/34 (82%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 154
+KLA +D WSS+ H+A+DNT+V+ ++++LC +N
Sbjct: 152 KKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSN 185
>ZFIN|ZDB-GENE-040917-3 [details] [associations]
symbol:atg4b "ATG4 autophagy related 4 homolog B (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040917-3
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 OMA:PYRESST
InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
MEROPS:C54.003 OrthoDB:EOG4JWVDK EMBL:BC076463 IPI:IPI00491010
UniGene:Dr.89769 ProteinModelPortal:Q6DG88 SMR:Q6DG88 STRING:Q6DG88
Ensembl:ENSDART00000121558 GeneTree:ENSGT00530000063000
InParanoid:Q6DG88 Bgee:Q6DG88 Uniprot:Q6DG88
Length = 394
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 48/91 (52%), Positives = 69/91 (75%)
Query: 27 GRDWQWNVNSKEEA-YLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W+ ++ Y+ IL F D++ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWKWSPGQRQRPEYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDSWSRLAVHVAMDNTVVIEEIKRLC 183
Score = 105 (42.0 bits), Expect = 0.00062, P = 0.00062
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 151
+KLA +D WS + HVA+DNT+V+ ++K+LC
Sbjct: 153 KKLAVFDSWSRLAVHVAMDNTVVIEEIKRLC 183
>UNIPROTKB|F1MJZ9 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
taurus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
IPI:IPI00704687 GeneTree:ENSGT00530000063000 EMBL:DAAA02009542
Ensembl:ENSBTAT00000020474 OMA:IPGALPM Uniprot:F1MJZ9
Length = 393
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 47/94 (50%), Positives = 72/94 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>UNIPROTKB|Q6PZ03 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOVERGEN:HBG050536 EMBL:AY570550 EMBL:AY570551
IPI:IPI00704687 IPI:IPI00704763 RefSeq:NP_001001170.1
UniGene:Bt.49066 ProteinModelPortal:Q6PZ03 SMR:Q6PZ03 STRING:Q6PZ03
MEROPS:C54.003 GeneID:408002 KEGG:bta:408002 CTD:23192
InParanoid:Q6PZ03 OrthoDB:EOG4JWVDK NextBio:20818622 Uniprot:Q6PZ03
Length = 393
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 47/94 (50%), Positives = 72/94 (76%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L+ F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTN 119
+KLA +D WS++ HVA+DNT+V+ +++LC ++
Sbjct: 153 KKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSS 186
>UNIPROTKB|F1PAF7 [details] [associations]
symbol:ATG4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AAEX03014562
OMA:IPGALPM Ensembl:ENSCAFT00000020734 Uniprot:F1PAF7
Length = 319
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 46/91 (50%), Positives = 69/91 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D WS++ H+A+DNT+V+ +++LC
Sbjct: 79 KKLAVFDTWSALAVHIAMDNTVVMEDIRRLC 109
>UNIPROTKB|F5H3G3 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
HGNC:HGNC:16489 IPI:IPI01014972 ProteinModelPortal:F5H3G3
SMR:F5H3G3 Ensembl:ENST00000545696 UCSC:uc011msl.2
ArrayExpress:F5H3G3 Bgee:F5H3G3 Uniprot:F5H3G3
Length = 259
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 48/91 (52%), Positives = 69/91 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 19 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 79 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 109
>UNIPROTKB|H7BYM2 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
HGNC:HGNC:16489 ProteinModelPortal:H7BYM2 PRIDE:H7BYM2
Ensembl:ENST00000394892 Uniprot:H7BYM2
Length = 312
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 48/91 (52%), Positives = 69/91 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 69 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 128
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 129 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 159
>UNIPROTKB|Q8WYN0 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006508 "proteolysis" evidence=IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
EMBL:CH471120 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536
OrthoDB:EOG4M91RH EMBL:AJ504651 EMBL:AB066214 EMBL:AJ320508
EMBL:AJ320509 EMBL:AK314429 EMBL:AL031177 EMBL:BC041862
EMBL:BC061696 IPI:IPI00064708 IPI:IPI00292327 IPI:IPI00328880
IPI:IPI00640839 RefSeq:NP_443168.2 RefSeq:NP_840054.1
UniGene:Hs.8763 PDB:2FUY PDB:2P82 PDBsum:2FUY PDBsum:2P82
ProteinModelPortal:Q8WYN0 SMR:Q8WYN0 IntAct:Q8WYN0 STRING:Q8WYN0
DMDM:61211859 PaxDb:Q8WYN0 PRIDE:Q8WYN0 DNASU:115201
Ensembl:ENST00000345734 Ensembl:ENST00000372232
Ensembl:ENST00000372254 Ensembl:ENST00000457035 GeneID:115201
KEGG:hsa:115201 UCSC:uc004enr.3 UCSC:uc004ent.3
GeneCards:GC0XP107334 HGNC:HGNC:16489 HPA:HPA036374 MIM:300663
neXtProt:NX_Q8WYN0 PharmGKB:PA25184 InParanoid:Q8WYN0 OMA:DIKKMCC
PhylomeDB:Q8WYN0 EvolutionaryTrace:Q8WYN0 GenomeRNAi:115201
NextBio:79530 ArrayExpress:Q8WYN0 Bgee:Q8WYN0 Genevestigator:Q8WYN0
GermOnline:ENSG00000101844 Uniprot:Q8WYN0
Length = 398
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 48/91 (52%), Positives = 69/91 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>RGD|1596915 [details] [associations]
symbol:Atg4al1 "autophagy related 4A, cysteine peptidase-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008234 "cysteine-type
peptidase activity" evidence=ISO] RGD:1596915 Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.006 EMBL:BC160890 IPI:IPI00767463
RefSeq:NP_001119770.1 UniGene:Rn.216396 ProteinModelPortal:B1H274
SMR:B1H274 GeneID:678769 KEGG:rno:678769 CTD:678769 NextBio:715090
Genevestigator:B1H274 Uniprot:B1H274
Length = 406
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 47/91 (51%), Positives = 69/91 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV+
Sbjct: 96 GRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVI 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>UNIPROTKB|F1RXI5 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
GeneTree:ENSGT00530000063000 EMBL:CU463012
Ensembl:ENSSSCT00000013744 Uniprot:F1RXI5
Length = 359
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 47/91 (51%), Positives = 68/91 (74%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
G DW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL
Sbjct: 96 GTDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVL 155
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 KKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 186
>UNIPROTKB|K7GK67 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000033291 Uniprot:K7GK67
Length = 325
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 48/93 (51%), Positives = 69/93 (74%)
Query: 25 FSGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQ 83
FS DW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQ
Sbjct: 21 FSPIDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQ 80
Query: 84 VLRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
VL+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 81 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMC 113
>UNIPROTKB|C9JQ72 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00894144 ProteinModelPortal:C9JQ72 SMR:C9JQ72 STRING:C9JQ72
Ensembl:ENST00000425239 ArrayExpress:C9JQ72 Bgee:C9JQ72
Uniprot:C9JQ72
Length = 266
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 46/89 (51%), Positives = 67/89 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 93 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 152
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKK 114
+KLA +D WSS+ H+A+DNT+V+ ++ K
Sbjct: 153 KKLAVFDTWSSLAVHIAMDNTVVMEEISK 181
>UNIPROTKB|E2RLY1 [details] [associations]
symbol:ATG4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
GeneTree:ENSGT00530000063000 EMBL:AAEX03026757
Ensembl:ENSCAFT00000028612 Uniprot:E2RLY1
Length = 399
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 48/92 (52%), Positives = 68/92 (73%)
Query: 27 GR-DWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQV 84
GR DW W ++ Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQV
Sbjct: 96 GREDWSWEKQKEQPREYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQV 155
Query: 85 LRKLAKYDDWSSIVFHVALDNTLVVNQVKKLC 116
L+KLA +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 156 LKKLALFDEWNSLAIYVSMDNTVVIEDIKKMC 187
>UNIPROTKB|C9JVD5 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00894423
ProteinModelPortal:C9JVD5 SMR:C9JVD5 STRING:C9JVD5
Ensembl:ENST00000430617 ArrayExpress:C9JVD5 Bgee:C9JVD5
Uniprot:C9JVD5
Length = 105
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 45/87 (51%), Positives = 66/87 (75%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G+W+GPNTVAQVL
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVL 78
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQV 112
+KLA +D WSS+ H+A+DNT+V+ ++
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEI 105
Score = 86 (35.3 bits), Expect = 0.00070, P = 0.00070
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 121 RKLAKYDDWSSIVFHVALDNTLVVNQV 147
+KLA +D WSS+ H+A+DNT+V+ ++
Sbjct: 79 KKLAVFDTWSSLAVHIAMDNTVVMEEI 105
>UNIPROTKB|K7GPU1 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000033275 Uniprot:K7GPU1
Length = 278
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 45/88 (51%), Positives = 66/88 (75%)
Query: 30 WQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL 88
W W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNTVAQVL+KL
Sbjct: 2 WNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL 61
Query: 89 AKYDDWSSIVFHVALDNTLVVNQVKKLC 116
A +D+W+S+ +V++DNT+V+ +KK+C
Sbjct: 62 ALFDEWNSLAVYVSMDNTVVIEDIKKMC 89
>WB|WBGene00013595 [details] [associations]
symbol:atg-4.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF03416
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AL110500
RefSeq:NP_493375.2 ProteinModelPortal:Q9NA30 SMR:Q9NA30
DIP:DIP-26265N IntAct:Q9NA30 MINT:MINT-1053134 STRING:Q9NA30
MEROPS:C54.008 PaxDb:Q9NA30 EnsemblMetazoa:Y87G2A.3 GeneID:190777
KEGG:cel:CELE_Y87G2A.3 UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3
InParanoid:Q9NA30 OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
Length = 454
Score = 264 (98.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V +WFGPNT AQV++
Sbjct: 104 GRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMK 163
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS+I HVALDN LV + T+
Sbjct: 164 KLTIFDDWSNIAVHVALDNILVKEDAITMATS 195
>UNIPROTKB|Q9NA30 [details] [associations]
symbol:atg-4.1 "Protein ATG-4.1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03416 eggNOG:NOG239662 HOGENOM:HOG000007008
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AL110500 RefSeq:NP_493375.2
ProteinModelPortal:Q9NA30 SMR:Q9NA30 DIP:DIP-26265N IntAct:Q9NA30
MINT:MINT-1053134 STRING:Q9NA30 MEROPS:C54.008 PaxDb:Q9NA30
EnsemblMetazoa:Y87G2A.3 GeneID:190777 KEGG:cel:CELE_Y87G2A.3
UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3 InParanoid:Q9NA30
OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
Length = 454
Score = 264 (98.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR ++W++ E Y KIL+MF D + A YSIHQIA G +EGK V +WFGPNT AQV++
Sbjct: 104 GRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMK 163
Query: 87 KLAKYDDWSSIVFHVALDNTLVVNQVKKLCTT 118
KL +DDWS+I HVALDN LV + T+
Sbjct: 164 KLTIFDDWSNIAVHVALDNILVKEDAITMATS 195
>UNIPROTKB|F1LX10 [details] [associations]
symbol:F1LX10 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
IPI:IPI00566476 Ensembl:ENSRNOT00000049323 Uniprot:F1LX10
Length = 309
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G+DW+W ++ + L +L F DR+ YSIHQIA G +EGK++G+W+G NTV QVL+
Sbjct: 78 GQDWRW---TQWKRLLNVLNAFLDRKDRYYSIHQIAQMGVNEGKSIGKWYGTNTVGQVLK 134
Query: 87 KLAKYDDWSSIVFHVALDN 105
KLA +D WS + HV L++
Sbjct: 135 KLAVFDTWSFLAIHVTLES 153
>UNIPROTKB|K7GM02 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000035338 Uniprot:K7GM02
Length = 159
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 25 FSGRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNT 80
FS DW W ++ + Y +IL+ F DR+ YSIHQ+A G EGK++GEWFGPNT
Sbjct: 9 FSPIDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNT 65
>DICTYBASE|DDB_G0283753 [details] [associations]
symbol:DDB_G0283753 species:44689 "Dictyostelium
discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
dictyBase:DDB_G0283753 Pfam:PF03416 GO:GO:0005737 EMBL:AAFI02000056
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
ProtClustDB:CLSZ2431228 RefSeq:XP_638996.1
ProteinModelPortal:Q54QM7 MEROPS:C54.A09 EnsemblProtists:DDB0218520
GeneID:8624242 KEGG:ddi:DDB_G0283753 InParanoid:Q54QM7 OMA:RTHVSEV
Uniprot:Q54QM7
Length = 551
Score = 155 (59.6 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
G +W+ S + I+ MF D+ +AP+SIH IA+ G + GK +GEWF P+ ++Q ++
Sbjct: 195 GDEWK---RSSSATHPDIISMFLDKPSAPFSIHNIAMEGQNLGKNIGEWFAPSIISQTIK 251
Query: 87 KLAK--YDDWSSIVFHVALDNTLVVNQVKKLCTTNKR 121
L YD + VF ++ D +L ++Q+ + + K+
Sbjct: 252 ILVSRNYDQCNISVF-ISEDGSLYIDQLLNISSKKKK 287
>ASPGD|ASPL0000035892 [details] [associations]
symbol:AN3470 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0032258 "CVT pathway" evidence=IEA] [GO:0006501
"C-terminal protein lipidation" evidence=IEA] [GO:0006612 "protein
targeting to membrane" evidence=IEA] [GO:0000422 "mitochondrion
degradation" evidence=IEA] [GO:0034727 "piecemeal microautophagy of
nucleus" evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0051697 "protein delipidation"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 EMBL:BN001306 eggNOG:NOG239662
KO:K08342 OMA:PYRESST InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AACD01000058 RefSeq:XP_661074.1 STRING:Q5B7L0 MEROPS:C54.006
GeneID:2874196 KEGG:ani:AN3470.2 HOGENOM:HOG000034155
OrthoDB:EOG470XRS Uniprot:Q5B7L0
Length = 402
Score = 149 (57.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 37/97 (38%), Positives = 53/97 (54%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GRDW+ +EE K+L +F D AP+SIH GA GK GEWFGP A+ +
Sbjct: 147 GRDWRRGERLEEEG--KLLSLFADSPHAPFSIHSFVKHGADFCGKHPGEWFGPTATARCI 204
Query: 86 RKLAKYDDWSSIVFHVALDNTLVVNQVKKLCTTNKRK 122
+ LA D S++ ++A DN+ V+Q K + + K
Sbjct: 205 QGLAARYDQSNLQVYIADDNS-DVHQDKFMSVSRDEK 240
>UNIPROTKB|Q86TL0 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0006508
GO:GO:0004197 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOGENOM:HOG000294192 HOVERGEN:HBG050537
EMBL:AJ312332 EMBL:BC068992 IPI:IPI00328573 RefSeq:NP_116274.3
UniGene:Hs.512799 ProteinModelPortal:Q86TL0 SMR:Q86TL0
STRING:Q86TL0 MEROPS:C54.005 PhosphoSite:Q86TL0 DMDM:61211809
PRIDE:Q86TL0 DNASU:84971 Ensembl:ENST00000309469 GeneID:84971
KEGG:hsa:84971 UCSC:uc002mov.3 CTD:84971 GeneCards:GC19P010654
HGNC:HGNC:20789 MIM:611340 neXtProt:NX_Q86TL0 PharmGKB:PA134907475
InParanoid:Q86TL0 OMA:YGWAVKS OrthoDB:EOG45MN5B GenomeRNAi:84971
NextBio:75518 ArrayExpress:Q86TL0 Bgee:Q86TL0 CleanEx:HS_ATG4D
Genevestigator:Q86TL0 GermOnline:ENSG00000130734 Uniprot:Q86TL0
Length = 474
Score = 137 (53.3 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + D +
Sbjct: 208 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT 267
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHV 136
+V +V+ D T+ V +L A +W S+V V
Sbjct: 268 RLVVYVSQDCTVYKADVARL-VARPDPTA---EWKSVVILV 304
Score = 34 (17.0 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 5/8 (62%), Positives = 5/8 (62%)
Query: 25 FSGRDWQW 32
F RDW W
Sbjct: 161 FLPRDWTW 168
>MGI|MGI:2444308 [details] [associations]
symbol:Atg4d "autophagy related 4D, cysteine peptidase"
species:10090 "Mus musculus" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006914 "autophagy" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] MGI:MGI:2444308 Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 HOGENOM:HOG000294192
HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971 OMA:YGWAVKS
OrthoDB:EOG45MN5B EMBL:AJ312333 EMBL:AK036571 EMBL:AK081605
EMBL:AK081002 EMBL:BC030861 EMBL:BC069851 IPI:IPI00387190
RefSeq:NP_705811.8 UniGene:Mm.440165 ProteinModelPortal:Q8BGV9
SMR:Q8BGV9 PhosphoSite:Q8BGV9 PRIDE:Q8BGV9
Ensembl:ENSMUST00000065005 GeneID:235040 KEGG:mmu:235040
UCSC:uc009okt.1 InParanoid:Q8BGV9 NextBio:382473 Bgee:Q8BGV9
CleanEx:MM_ATG4D Genevestigator:Q8BGV9
GermOnline:ENSMUSG00000002820 Uniprot:Q8BGV9
Length = 474
Score = 132 (51.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 43 KILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWSSIVFHV 101
+I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + S +V +V
Sbjct: 214 RIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGPSVVAHILRKAVESCSEVSRLVVYV 273
Query: 102 ALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHV 136
+ D T+ V +L + +W S+V V
Sbjct: 274 SQDCTVYKADVARLLSWPDPTA----EWKSVVILV 304
Score = 36 (17.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 25 FSGRDWQW 32
F RDW+W
Sbjct: 161 FLPRDWRW 168
>UNIPROTKB|E2RDP2 [details] [associations]
symbol:ATG4D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 CTD:84971 OMA:YGWAVKS
EMBL:AAEX03012418 RefSeq:XP_542069.1 ProteinModelPortal:E2RDP2
Ensembl:ENSCAFT00000028187 GeneID:484953 KEGG:cfa:484953
NextBio:20859019 Uniprot:E2RDP2
Length = 473
Score = 133 (51.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 207 QERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEIT 266
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHV 136
+V +V+ D T+ V +L A +W S+V V
Sbjct: 267 RLVVYVSQDCTVYKADVARL-VARPDPTA---EWKSVVILV 303
Score = 34 (17.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 5/8 (62%), Positives = 5/8 (62%)
Query: 25 FSGRDWQW 32
F RDW W
Sbjct: 160 FLPRDWTW 167
>UNIPROTKB|F1S3M2 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
OMA:YGWAVKS EMBL:CU993813 Ensembl:ENSSSCT00000014905 Uniprot:F1S3M2
Length = 469
Score = 131 (51.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 203 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 262
Query: 96 SIVFHVALDNTLVVNQVKKL 115
+V +V+ D T+ V +L
Sbjct: 263 RLVVYVSQDCTVYKADVARL 282
Score = 35 (17.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 5/9 (55%), Positives = 6/9 (66%)
Query: 25 FSGRDWQWN 33
F RDW W+
Sbjct: 160 FLPRDWTWS 168
>UNIPROTKB|Q684M2 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971
OrthoDB:EOG45MN5B EMBL:AJ632303 RefSeq:NP_001116551.1
UniGene:Ssc.6142 ProteinModelPortal:Q684M2 GeneID:100141400
KEGG:ssc:100141400 Uniprot:Q684M2
Length = 469
Score = 131 (51.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G S GK G+W+GP+ VA +LRK + + +
Sbjct: 203 QERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSEVT 262
Query: 96 SIVFHVALDNTLVVNQVKKL 115
+V +V+ D T+ V +L
Sbjct: 263 RLVVYVSQDCTVYKADVARL 282
Score = 35 (17.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 5/9 (55%), Positives = 6/9 (66%)
Query: 25 FSGRDWQWN 33
F RDW W+
Sbjct: 160 FLPRDWTWS 168
>UNIPROTKB|F1N5L1 [details] [associations]
symbol:ATG4D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
OMA:YGWAVKS EMBL:DAAA02019466 UniGene:Bt.30691 IPI:IPI00854526
Ensembl:ENSBTAT00000014200 ArrayExpress:F1N5L1 Uniprot:F1N5L1
Length = 472
Score = 129 (50.5 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 30/101 (29%), Positives = 52/101 (51%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKLAKY-DDWS 95
+E + +I+ F D AP+ +H++ G GK G+W+GP+ VA +LRK + + +
Sbjct: 206 QERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKKAGDWYGPSLVAHILRKAVESCSEVT 265
Query: 96 SIVFHVALDNTLVVNQVKKLCTTNKRKLAKYDDWSSIVFHV 136
+V +V+ D T+ V +L A +W S+V V
Sbjct: 266 RLVVYVSQDCTVYKADVARL-VARPDPTA---EWKSVVILV 302
Score = 34 (17.0 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 5/8 (62%), Positives = 5/8 (62%)
Query: 25 FSGRDWQW 32
F RDW W
Sbjct: 160 FLPRDWTW 167
>MGI|MGI:2651854 [details] [associations]
symbol:Atg4c "autophagy related 4C, cysteine peptidase"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISO;ISS] [GO:0005576 "extracellular region"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic
process" evidence=ISA] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
evidence=ISA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] MGI:MGI:2651854
Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
OrthoDB:EOG4GB760 EMBL:AJ312233 EMBL:AL627166 EMBL:BC058981
IPI:IPI00177235 RefSeq:NP_001139439.1 RefSeq:NP_778194.3
UniGene:Mm.241663 ProteinModelPortal:Q811C2 SMR:Q811C2
STRING:Q811C2 PhosphoSite:Q811C2 PRIDE:Q811C2
Ensembl:ENSMUST00000030279 Ensembl:ENSMUST00000180278 GeneID:242557
KEGG:mmu:242557 InParanoid:B1ASJ9 NextBio:385412 Bgee:Q811C2
CleanEx:MM_ATG4C Genevestigator:Q811C2
GermOnline:ENSMUSG00000028550 Uniprot:Q811C2
Length = 458
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ EAY KI+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 252 DLQGLTIYVAQDCTVYNSDV 271
Score = 34 (17.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 5/8 (62%), Positives = 5/8 (62%)
Query: 25 FSGRDWQW 32
F GR W W
Sbjct: 128 FLGRAWTW 135
>UNIPROTKB|C9J1C1 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
OrthoDB:EOG4JWVDK EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00892755 ProteinModelPortal:C9J1C1 SMR:C9J1C1 STRING:C9J1C1
Ensembl:ENST00000419606 ArrayExpress:C9J1C1 Bgee:C9J1C1
Uniprot:C9J1C1
Length = 66
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 27 GRDWQWNVNSKE-EAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVG 73
GRDW+W ++ ++Y +L F DR+ + YSIHQIA G EGK++G
Sbjct: 19 GRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIG 66
>UNIPROTKB|E2R5A4 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 CTD:84938
OMA:PARSGCT EMBL:AAEX03003767 EMBL:AAEX03003768 RefSeq:XP_852273.1
RefSeq:XP_865426.1 ProteinModelPortal:E2R5A4
Ensembl:ENSCAFT00000029726 GeneID:489561 KEGG:cfa:489561
NextBio:20862726 Uniprot:E2R5A4
Length = 458
Score = 135 (52.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEIYHRKIISWFGDSPLALFGLHQLIKYGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV-KKLCTT 118
D I +VA D T+ + V K CT+
Sbjct: 252 DLQGITIYVAQDCTVYSSDVIDKQCTS 278
>UNIPROTKB|F1MJ23 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:DAAA02008674
IPI:IPI00717434 UniGene:Bt.31619 PRIDE:F1MJ23
Ensembl:ENSBTAT00000013356 Uniprot:F1MJ23
Length = 458
Score = 134 (52.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 QNEIYHRKIISWFGDSPLALFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV-KKLCTT 118
D I +VA D T+ + V K CT+
Sbjct: 252 DLKGITIYVAQDCTVYSSDVIDKQCTS 278
>UNIPROTKB|Q523C3 [details] [associations]
symbol:ATG4 "Cysteine protease ATG4" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 EMBL:CM001234 eggNOG:NOG239662
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624 OrthoDB:EOG470XRS
RefSeq:XP_003716330.1 STRING:Q523C3 EnsemblFungi:MGG_03580T0
GeneID:2676731 KEGG:mgr:MGG_03580 Uniprot:Q523C3
Length = 491
Score = 128 (50.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASE-GKAVGEWFGPNTVAQVL 85
GR W+ EE K+L +F D APYSIH GA++ GK GEWFGP+ A+ +
Sbjct: 225 GRSWRRGQAPDEER--KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCI 282
Query: 86 RKLAKYDDWSSIVF 99
LA + S V+
Sbjct: 283 HALANATENSFRVY 296
>UNIPROTKB|Q96DT6 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005829 "cytosol" evidence=ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IDA] [GO:0000045 "autophagic vacuole
assembly" evidence=IGI] [GO:0006612 "protein targeting to membrane"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0006914 "autophagy" evidence=IGI] [GO:0006508 "proteolysis"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] EMBL:AJ312234
Pfam:PF03416 GO:GO:0005829 GO:GO:0005576 GO:GO:0006612
EMBL:CH471059 GO:GO:0000045 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AJ320169 EMBL:AK027773 EMBL:AC103923 EMBL:BC033024
IPI:IPI00156979 RefSeq:NP_116241.2 RefSeq:NP_835739.1
UniGene:Hs.7353 ProteinModelPortal:Q96DT6 SMR:Q96DT6 IntAct:Q96DT6
STRING:Q96DT6 MEROPS:C54.004 PhosphoSite:Q96DT6 DMDM:61211867
PRIDE:Q96DT6 DNASU:84938 Ensembl:ENST00000317868
Ensembl:ENST00000371120 GeneID:84938 KEGG:hsa:84938 UCSC:uc001dat.3
CTD:84938 GeneCards:GC01P063249 HGNC:HGNC:16040 HPA:HPA007049
MIM:611339 neXtProt:NX_Q96DT6 PharmGKB:PA25183 HOGENOM:HOG000294192
HOVERGEN:HBG050537 InParanoid:Q96DT6 OMA:PARSGCT OrthoDB:EOG4GB760
ChiTaRS:ATG4C GenomeRNAi:84938 NextBio:75392 ArrayExpress:Q96DT6
Bgee:Q96DT6 CleanEx:HS_ATG4C Genevestigator:Q96DT6
GermOnline:ENSG00000125703 Uniprot:Q96DT6
Length = 458
Score = 126 (49.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 RNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D I +VA D T+ + V
Sbjct: 252 DLQGITIYVAQDCTVYNSDV 271
>FB|FBgn0038325 [details] [associations]
symbol:CG6194 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0006914 "autophagy"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0048102 "autophagic cell death"
evidence=IEP] Pfam:PF03416 EMBL:AE014297 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0035071
GO:GO:0004197 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.A03 FlyBase:FBgn0038325
EMBL:BT100116 RefSeq:NP_650452.1 UniGene:Dm.2122 SMR:Q9VF80
MINT:MINT-935388 EnsemblMetazoa:FBtr0083115 GeneID:41868
KEGG:dme:Dmel_CG6194 UCSC:CG6194-RA InParanoid:Q9VF80 OMA:ICHFLGR
GenomeRNAi:41868 NextBio:826008 Uniprot:Q9VF80
Length = 668
Score = 128 (50.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 30/106 (28%), Positives = 58/106 (54%)
Query: 25 FSGRDWQWNVNSK------EEAYLKILKMFEDR--RTAPYSIHQIALTGASEGKAVGEWF 76
F GR W+++ S+ + + KI+K F D +++P+SIH + G GK G+W+
Sbjct: 315 FLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWY 374
Query: 77 GPNTVAQVLRKLAKYD-----DWSSIVFHVALDNTLVVNQVKKLCT 117
GP +V+ +L+ ++ D+ +I +VA D T+ + ++ C+
Sbjct: 375 GPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 420
>UNIPROTKB|F1S810 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:CU467524
Ensembl:ENSSSCT00000004223 Uniprot:F1S810
Length = 458
Score = 125 (49.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ E Y KI+ F D + +HQ+ G GK G+W+GP VA +LRK A++
Sbjct: 192 QNEIYHRKIISWFGDSPLTLFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 251
Query: 93 DWSSIVFHVALDNTLVVNQV-KKLCTT 118
D I +VA D T+ + V K C +
Sbjct: 252 DLQGITIYVAQDCTVYSSDVIDKQCAS 278
>TAIR|locus:2080447 [details] [associations]
symbol:AT3G59950 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006914 "autophagy"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] UniProt:Q9M1Y0 Pfam:PF03416
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0005776
GO:GO:0006914 GO:GO:0006508 GO:GO:0005775 EMBL:AL138647 HSSP:Q9Y4P1
eggNOG:NOG239662 HOGENOM:HOG000007008 ProtClustDB:CLSN2685022
GO:GO:0019786 GO:GO:0016807 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AB073172 EMBL:AK226932 EMBL:AK220621 IPI:IPI00519628
IPI:IPI00846196 PIR:T47819 RefSeq:NP_001118859.1 RefSeq:NP_191554.1
UniGene:At.1165 UniGene:At.48785 ProteinModelPortal:Q9M1Y0
SMR:Q9M1Y0 STRING:Q9M1Y0 MEROPS:C54.A02 PaxDb:Q9M1Y0 PRIDE:Q9M1Y0
EnsemblPlants:AT3G59950.1 GeneID:825165 KEGG:ath:AT3G59950
TAIR:At3g59950 InParanoid:Q9M1Y0 OMA:HRMKIMN PhylomeDB:Q9M1Y0
Genevestigator:Q9M1Y0
Length = 477
Score = 123 (48.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 27 GRDWQWNVNSK-EEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVL 85
GR W+ + +E YL+IL++F D + +SIH + L G S G A G W GP V +
Sbjct: 192 GRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSW 251
Query: 86 RKLAK 90
LA+
Sbjct: 252 ESLAR 256
>UNIPROTKB|E1BS34 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
CTD:84938 OMA:ICHFLGR EMBL:AADN02012479 IPI:IPI00590224
RefSeq:XP_422520.2 Ensembl:ENSGALT00000017894 GeneID:424688
KEGG:gga:424688 NextBio:20826988 Uniprot:E1BS34
Length = 459
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 37 KEEAY-LKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ E Y KI+ F D A + +HQ+ G GK G+W+GP VA +LRK A+
Sbjct: 192 RNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHILRKAVEEARDP 251
Query: 93 DWSSIVFHVALDNTLVVNQV 112
+ + +VA D T+ + V
Sbjct: 252 ELQGVTVYVAQDCTVYSSDV 271
>TAIR|locus:2051754 [details] [associations]
symbol:AT2G44140 "AT2G44140" species:3702 "Arabidopsis
thaliana" [GO:0006914 "autophagy" evidence=ISS] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] Pfam:PF03416 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0015031 GO:GO:0005776 GO:GO:0006914 GO:GO:0006508
GO:GO:0005775 EMBL:AC004005 EMBL:AB073171 EMBL:AK227012
IPI:IPI00521369 IPI:IPI00541858 PIR:T00694 RefSeq:NP_850412.1
RefSeq:NP_973687.1 UniGene:At.48588 UniGene:At.75169 HSSP:Q9Y4P1
ProteinModelPortal:Q8S929 SMR:Q8S929 MEROPS:C54.A01 PaxDb:Q8S929
PRIDE:Q8S929 EnsemblPlants:AT2G44140.1 GeneID:819020
KEGG:ath:AT2G44140 TAIR:At2g44140 eggNOG:NOG239662
HOGENOM:HOG000007008 InParanoid:Q8S929 KO:K08342 OMA:PYRESST
PhylomeDB:Q8S929 ProtClustDB:CLSN2685022 Genevestigator:Q8S929
GO:GO:0019786 GO:GO:0016807 InterPro:IPR005078 PANTHER:PTHR22624
Uniprot:Q8S929
Length = 467
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLR 86
GR W E+ YL+ L+ F D + +SIH + + GAS G A G W GP + +
Sbjct: 189 GRAWTKKSELPEQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWE 248
Query: 87 KLA 89
LA
Sbjct: 249 SLA 251
>RGD|1598323 [details] [associations]
symbol:Atg4c "autophagy related 4C, cysteine peptidase"
species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
assembly" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA;ISO] [GO:0006914 "autophagy" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
RGD:1598323 Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 IPI:IPI00763704
Ensembl:ENSRNOT00000011631 Uniprot:F1M3M0
Length = 432
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 37 KEEAYLK-ILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRKL---AKYD 92
+ E Y + I+ F D A + +H++ G GK G+W+GP VA +LRK A++
Sbjct: 166 QSEIYHRQIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHILRKAVEEARHP 225
Query: 93 DWSSIVFHVALDNTLVVNQV 112
D + +VA D T+ + V
Sbjct: 226 DLQGLTIYVAQDCTVYNSDV 245
>SGD|S000005167 [details] [associations]
symbol:ATG4 "Conserved cysteine protease required for
autophagy" species:4932 "Saccharomyces cerevisiae" [GO:0006914
"autophagy" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP;IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051697 "protein
delipidation" evidence=IDA] [GO:0006501 "C-terminal protein
lipidation" evidence=IMP] [GO:0000045 "autophagic vacuole assembly"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000422
"mitochondrion degradation" evidence=IMP] [GO:0016485 "protein
processing" evidence=IMP] SGD:S000005167 Pfam:PF03416 GO:GO:0005829
GO:GO:0005634 GO:GO:0006612 GO:GO:0000045 GO:GO:0006508
EMBL:BK006947 GO:GO:0000422 GO:GO:0016485 GO:GO:0032258
GO:GO:0004197 GO:GO:0034727 GO:GO:0006501 EMBL:Z69381
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.001 OrthoDB:EOG470XRS
EMBL:Z71499 EMBL:U20390 PIR:S63181 RefSeq:NP_014176.2
ProteinModelPortal:P53867 SMR:P53867 DIP:DIP-2339N IntAct:P53867
MINT:MINT-683938 STRING:P53867 EnsemblFungi:YNL223W GeneID:855498
KEGG:sce:YNL223W CYGD:YNL223w HOGENOM:HOG000034154 OMA:IGWGCMI
NextBio:979490 Genevestigator:P53867 GermOnline:YNL223W
GO:GO:0051697 Uniprot:P53867
Length = 494
Score = 108 (43.1 bits), Expect = 0.00030, P = 0.00030
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 27 GRDWQWNVNSKEEAYLKILKMFEDRRTAPYSIHQIALTGAS-EGKAVGEWFGPNTVAQVL 85
GRD++ N N E K + F D AP+S+H G K GEWFGP A+ +
Sbjct: 166 GRDFRVNGNESLERESKFVNWFNDTPEAPFSLHNFVSAGTELSDKRPGEWFGPAATARSI 225
Query: 86 RKL 88
+ L
Sbjct: 226 QSL 228
>ZFIN|ZDB-GENE-040625-84 [details] [associations]
symbol:atg4c "autophagy-related 4C (yeast)"
species:7955 "Danio rerio" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040625-84 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
OrthoDB:EOG4GB760 EMBL:BX936431 EMBL:BC071514 IPI:IPI00512295
RefSeq:NP_001002103.1 UniGene:Dr.77023 Ensembl:ENSDART00000051779
Ensembl:ENSDART00000127879 GeneID:415193 KEGG:dre:415193
InParanoid:Q6IQ96 NextBio:20818863 Uniprot:Q6IQ96
Length = 463
Score = 98 (39.6 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 37 KEEAYLKILKMFEDRRTAPYSIHQIALTGASEGKAVGEWFGPNTVAQVLRK 87
KE + I+ F D +A I+++ G + GK G+W+GP VA +LRK
Sbjct: 190 KETYHRTIVSWFGDGPSAQLGIYKLVELGMTSGKQAGDWYGPAVVAHILRK 240
Score = 41 (19.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 5/7 (71%), Positives = 7/7 (100%)
Query: 27 GRDWQWN 33
GRDW+W+
Sbjct: 129 GRDWKWS 135
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 158 158 0.00085 106 3 11 22 0.49 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 603 (64 KB)
Total size of DFA: 166 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.08u 0.09s 16.17t Elapsed: 00:00:01
Total cpu time: 16.08u 0.09s 16.17t Elapsed: 00:00:01
Start: Thu Aug 15 14:42:03 2013 End: Thu Aug 15 14:42:04 2013