BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10448
         (1001 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
            melanogaster GN=Mi-2 PE=1 SV=2
          Length = 1982

 Score = 1061 bits (2744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/963 (58%), Positives = 657/963 (68%), Gaps = 194/963 (20%)

Query: 77   LEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRH--------NINDEELEK 128
            L+V+HP +++S+ +K   D  EPP  EE LDE D R  R+ RH        N + E LE+
Sbjct: 543  LDVHHPLMIRSFQRKY--DMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEE 600

Query: 129  KYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEF 188
            ++Y+ G+KPEWLI  RVIN +T RDGST+YLVKWR+LPYDK+TWE+E +DI GL+++I++
Sbjct: 601  RFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDY 660

Query: 189  YNKKKSKGRGKT-------------KTKELQEDEDGASGSKP-RRYTPPPEKPTTDLRKK 234
            Y   ++    +T                ++++DED     +P + YTPPPEKPTTDL+KK
Sbjct: 661  YQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDED-----RPVKHYTPPPEKPTTDLKKK 715

Query: 235  YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
            YE QP FL+ TGMQLH YQ+EGINWLRYSWGQ IDTILADEMGLGKTIQT+TFLYSL+KE
Sbjct: 716  YEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKE 775

Query: 295  GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG 354
            GHC+GPFLV+ PLST++NWEREFE WAPDFY +TY+GDKD R V+R++++S+E+ A RG 
Sbjct: 776  GHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGS 835

Query: 355  KPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYS 414
            K  R+R++  KF+VLLTSYELI+ D A LGSI+WAVLVVDEAHRLKSNQSKFF+ L+ Y+
Sbjct: 836  KVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYT 895

Query: 415  IQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPH 474
            I  KLLLTGTPLQNNLEELFHLLNFL+ +KFNDL +FQ EFAD+SKEEQVKRLH++LGPH
Sbjct: 896  IAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPH 955

Query: 475  MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMM 534
            MLRRLK DVLKNMPSKSEFIVRVELS MQKK+YK+ILT+N+EALN K GG   SL+NIMM
Sbjct: 956  MLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMM 1015

Query: 535  DLKKCCNHPYLFPAAAEEAPVQGGQ-YEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKP 593
            DLKKCCNHPYLFP+AAEEA    G  YEI +LT+AAGKLVLLSKMLK+LK   HR  I  
Sbjct: 1016 DLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLI-- 1073

Query: 594  EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDI 653
                                                              F  MTKMLDI
Sbjct: 1074 --------------------------------------------------FSQMTKMLDI 1083

Query: 654  LEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTV 713
            LED+L+GE YKYERIDG ITG++RQE+IDRFNAPGA QFVFLLSTR+GGLGINLATADTV
Sbjct: 1084 LEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTV 1143

Query: 714  IIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 773
            IIYDSDWNPHNDIQAFSRAHRIG                                     
Sbjct: 1144 IIYDSDWNPHNDIQAFSRAHRIG------------------------------------- 1166

Query: 774  QQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTE 833
            Q NKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGK ANFTKQELDDILRFGTE
Sbjct: 1167 QANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTE 1226

Query: 834  ELFKE-------------------------EEEQPENTEIIK------------------ 850
            +LFKE                         EE++    E +                   
Sbjct: 1227 DLFKEDDKEEAIHYDDKAVAELLDRTNRGIEEKESWANEYLSSFKVASYATKEEEEEEET 1286

Query: 851  ----QEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQT--------------DD 892
                Q+AEN DPAYWVKLLRHHYEQHQEDV R+LGKGKRVRKQ               DD
Sbjct: 1287 EIIKQDAENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQVNYTDGGVVAADTTRDD 1346

Query: 893  ENDDDDFDEKND------------GDLTGRRSAKKKEMSKQER--DRPLPPLLARVGGNI 938
             N  D+  E N              D   +  A++K   + ER  DRPLPPLLARVGGNI
Sbjct: 1347 SNWQDNGSEYNSEYSAGSDEDGGDDDFDDQNGAERKAKRRLERRDDRPLPPLLARVGGNI 1406

Query: 939  EVL 941
            EVL
Sbjct: 1407 EVL 1409



 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 50/53 (94%)

Query: 939  EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTN 991
            +VLNQLEELLSDMKSDVSRLPATLARIPPVAQRL MSERSILSRLAAT+ + +
Sbjct: 1882 KVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSILSRLAATAGNAS 1934


>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
            PE=1 SV=3
          Length = 2000

 Score =  966 bits (2498), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/949 (55%), Positives = 617/949 (65%), Gaps = 190/949 (20%)

Query: 77   LEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIK 136
            LE++H  + ++Y +K  ND  EPP L+    E+D +  +    + +  E+E+KYYR+GIK
Sbjct: 570  LEIFHLVMYRNYQRK--NDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK 627

Query: 137  PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKG 196
            PEW+  +R+IN    + G+  YLVKWRDLPYD++TWE++  +IP  +E  + Y       
Sbjct: 628  PEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQSY------- 680

Query: 197  RGKTKTKELQEDEDGASGSKPRRYTP---------PPEKPTTDLRKKYEKQPPFLDDTGM 247
                + +EL   ED A   +PR+Y           PP  PT D   KYE QP F+  TG 
Sbjct: 681  ---WRHRELIMGEDPA---QPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGG 734

Query: 248  QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
             LH YQLEG+NWLR+SW Q  DTILADEMGLGKTIQTI FLYSL+KEGH KGPFLVSAPL
Sbjct: 735  TLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 794

Query: 308  STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC--RIRSSTVK 365
            STIINWEREF+ WAP FYVVTY GDKD R ++R+++ S+ED A +GGK      R + VK
Sbjct: 795  STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 854

Query: 366  FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
            FHVLLTSYELIT D A LGSI WA LVVDEAHRLK+NQSKFF+ L+GY I +KLLLTGTP
Sbjct: 855  FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTP 914

Query: 426  LQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLK 485
            LQNNLEELFHLLNFLTPE+FN+L  F  EFADISKE+Q+K+LHDLLGPHMLRRLKADV K
Sbjct: 915  LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFK 974

Query: 486  NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYL 545
            NMP+K+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLNIMMDLKKCCNHPYL
Sbjct: 975  NMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1034

Query: 546  FPAAAEEAP-VQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINS 604
            FP AA E+P +  G YE  AL +++GKL+LL KML+KLKE GHR  I             
Sbjct: 1035 FPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLI------------- 1081

Query: 605  KTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYK 664
                                                   F  MTKMLD+LED+LD EGYK
Sbjct: 1082 ---------------------------------------FSQMTKMLDLLEDFLDYEGYK 1102

Query: 665  YERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHN 724
            YERIDG ITG++RQE+IDRFNAPGA QF FLLSTR+GGLGINLATADTVII+DSDWNPHN
Sbjct: 1103 YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHN 1162

Query: 725  DIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFV 784
            DIQAFSRAHRIG                                     Q NKVMIYRFV
Sbjct: 1163 DIQAFSRAHRIG-------------------------------------QANKVMIYRFV 1185

Query: 785  TRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFKEE---EE 841
            TR SVEER+TQVAKRKMMLTHLVVRPG+G K  + +KQELDDIL+FGTEELFK+E   E 
Sbjct: 1186 TRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGEN 1245

Query: 842  QPENTEIIKQEAE----------------------------------------------- 854
            + E++ +I  + E                                               
Sbjct: 1246 KEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIERE 1305

Query: 855  ------NQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTDDENDDDDFDEKNDGDLT 908
                  N DP YW KLLRHHYEQ QED++R LGKGKRVRKQ  + ND    D+ N  + +
Sbjct: 1306 IIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQV-NYNDAAQEDQDNQSEYS 1364

Query: 909  ---------------GRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLN 942
                           GRR +K++   + E+D+PLPPLLARVGGNIEVL 
Sbjct: 1365 VGSEEEDEDFDERPEGRRQSKRQ--LRNEKDKPLPPLLARVGGNIEVLG 1411



 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 939  EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTNPSSA 995
            +VLNQLEELLSDMK+DV+RLPATL+RIPP+A RL MSERSILSRLA+  T  +P+ A
Sbjct: 1863 KVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPA 1919


>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
            PE=1 SV=2
          Length = 1912

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/964 (54%), Positives = 626/964 (64%), Gaps = 211/964 (21%)

Query: 77   LEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIK 136
            LE++   + ++Y +K  ND  EPP+ +   DEE  R  R N+ +    E+E+++YRYGIK
Sbjct: 563  LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSR-KRKNK-DPKFAEMEERFYRYGIK 618

Query: 137  PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDEN---EDIPGLKESIEFYNKKK 193
            PEW++ +R++N    + G   YL+KWRDLPYD+A+WE E+   +D    K+S  ++N + 
Sbjct: 619  PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 675

Query: 194  SKGRGKTKTKELQEDEDGASGSKPRRYTP-----PPEKPTTDLRKKYEKQPPFLDDTGMQ 248
                      EL   E+G  G K ++        PPE PT D   KYE+QP +LD TG  
Sbjct: 676  ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 725

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            LH YQ+EG+NWLR+SW Q  DTILADEMGLGKT+QT  FLYSL+KEGH KGPFLVSAPLS
Sbjct: 726  LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 785

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCR--IRSSTVKF 366
            TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK      + ++VKF
Sbjct: 786  TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 845

Query: 367  HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPL 426
            HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTPL
Sbjct: 846  HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 905

Query: 427  QNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
            QNNLEELFHLLNFLTPE+F++L  F  EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 906  QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 965

Query: 487  MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
            MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 966  MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1025

Query: 547  PAAAEEAP-VQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSK 605
            P AA EAP +  G Y+  AL RA+GKL+LL KMLK LKE GHR  I              
Sbjct: 1026 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI-------------- 1071

Query: 606  TLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKY 665
                                                  F  MTKMLD+LED+L+ EGYKY
Sbjct: 1072 --------------------------------------FSQMTKMLDLLEDFLEHEGYKY 1093

Query: 666  ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
            ERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGLGINL                  
Sbjct: 1094 ERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL------------------ 1135

Query: 726  IQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVT 785
                               ATADTVIIYDSDWNPHNDIQAFSRAHRIGQ  KVMIYRFVT
Sbjct: 1136 -------------------ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVT 1176

Query: 786  RNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGT------------- 832
            R SVEER+TQVAK+KMMLTHLVVRPG+G K  + +KQELDDIL+FGT             
Sbjct: 1177 RASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGG 1236

Query: 833  ------------------EELFKEEEEQPENTE--------------------------- 847
                              E L    +++ E+TE                           
Sbjct: 1237 DNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEE 1296

Query: 848  -----IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQT------------ 890
                 IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ             
Sbjct: 1297 EVEREIIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDW 1355

Query: 891  -DDEND------------DDDFDEKNDGDLTGRRSAKKKEMSKQERDRPLPPLLARVGGN 937
             DD++D            D+DFDE+++     RR ++K    + ++D+PLPPLLARVGGN
Sbjct: 1356 QDDQSDNQSDYSVASEEGDEDFDERSEAP---RRPSRKG--LRNDKDKPLPPLLARVGGN 1410

Query: 938  IEVL 941
            IEVL
Sbjct: 1411 IEVL 1414



 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 44/53 (83%)

Query: 940  VLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTNP 992
            VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRLA  +    P
Sbjct: 1853 VLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPTP 1905


>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
            PE=1 SV=1
          Length = 1915

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/964 (54%), Positives = 626/964 (64%), Gaps = 211/964 (21%)

Query: 77   LEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIK 136
            LE++   + ++Y +K  ND  EPP+ +   DEE  R  R N+ +    E+E+++YRYGIK
Sbjct: 556  LELHCQVMFRNYQRK--NDMDEPPSGDFGGDEEKSR-KRKNK-DPKFAEMEERFYRYGIK 611

Query: 137  PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDEN---EDIPGLKESIEFYNKKK 193
            PEW++ +R++N    + G   YL+KWRDLPYD+A+WE E+   +D    K+S  ++N + 
Sbjct: 612  PEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQS--YWNHR- 668

Query: 194  SKGRGKTKTKELQEDEDGASGSKPRRYTP-----PPEKPTTDLRKKYEKQPPFLDDTGMQ 248
                      EL   E+G  G K ++        PPE PT D   KYE+QP +LD TG  
Sbjct: 669  ----------ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGT 718

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            LH YQ+EG+NWLR+SW Q  DTILADEMGLGKT+QT  FLYSL+KEGH KGPFLVSAPLS
Sbjct: 719  LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 778

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCR--IRSSTVKF 366
            TIINWEREFE WAPD YVVTYVGDKD R ++R+++ S+ED A RGGK      + ++VKF
Sbjct: 779  TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 838

Query: 367  HVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPL 426
            HVLLTSYELIT D+A+LGSI+WA L+VDEAHRLK+NQSKFF+ L+GYS+Q+KLLLTGTPL
Sbjct: 839  HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPL 898

Query: 427  QNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKN 486
            QNNLEELFHLLNFLTPE+F++L  F  EFADI+KE+Q+K+LHD+LGPHMLRRLKADV KN
Sbjct: 899  QNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKN 958

Query: 487  MPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF 546
            MPSK+E IVRVELSPMQKKYYKYILTRNFEALN +GGG QVSLLN++MDLKKCCNHPYLF
Sbjct: 959  MPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLF 1018

Query: 547  PAAAEEAP-VQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSK 605
            P AA EAP +  G Y+  AL RA+GKL+LL KMLK LKE GHR  I              
Sbjct: 1019 PVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI-------------- 1064

Query: 606  TLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKY 665
                                                  F  MTKMLD+LED+L+ EGYKY
Sbjct: 1065 --------------------------------------FSQMTKMLDLLEDFLEHEGYKY 1086

Query: 666  ERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHND 725
            ERIDG ITG+MRQE+IDRFNAPGA QF FLLSTR+GGLGINL                  
Sbjct: 1087 ERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL------------------ 1128

Query: 726  IQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVT 785
                               ATADTVIIYDSDWNPHNDIQAFSRAHRIGQ  KVMIYRFVT
Sbjct: 1129 -------------------ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVT 1169

Query: 786  RNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGT------------- 832
            R SVEER+TQVAK+KMMLTHLVVRPG+G K  + +KQELDDIL+FGT             
Sbjct: 1170 RASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGG 1229

Query: 833  ------------------EELFKEEEEQPENTE--------------------------- 847
                              E L    +++ E+TE                           
Sbjct: 1230 DNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEE 1289

Query: 848  -----IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQT------------ 890
                 IIKQE E+ DP YW KLLRHHYEQ QED++R LGKGKR+RKQ             
Sbjct: 1290 EVEREIIKQE-ESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDW 1348

Query: 891  -DDEND------------DDDFDEKNDGDLTGRRSAKKKEMSKQERDRPLPPLLARVGGN 937
             DD++D            D+DFDE+++     RR ++K    + ++D+PLPPLLARVGGN
Sbjct: 1349 QDDQSDNQSDYSVASEEGDEDFDERSEAP---RRPSRKG--LRNDKDKPLPPLLARVGGN 1403

Query: 938  IEVL 941
            IEVL
Sbjct: 1404 IEVL 1407



 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 42/45 (93%)

Query: 940  VLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLA 984
            VL QLEELLSDMK+DV+RLPAT+ARIPPVA RL MSER+ILSRLA
Sbjct: 1856 VLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLA 1900


>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
            PE=2 SV=1
          Length = 1954

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/768 (58%), Positives = 535/768 (69%), Gaps = 95/768 (12%)

Query: 77   LEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIK 136
            LE+YH  + ++Y +K  ND  EPP  +    +ED +  +    +    ++E+++YRYGIK
Sbjct: 531  LELYHTVMYRNYQRK--NDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIK 588

Query: 137  PEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKG 196
            PEW++ +R++N    + G   YL+KW+DLPYD+ TWE ++ DIP      + Y   +   
Sbjct: 589  PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELM 648

Query: 197  RGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
             G+  T+  +         +  +   PP+ P  D   K++KQP ++D TG  LH YQLEG
Sbjct: 649  LGED-TRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEG 707

Query: 257  INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
            +NWLR+SW Q  DTILADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWERE
Sbjct: 708  LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 767

Query: 317  FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPC-RIRSST-VKFHVLLTSYE 374
            FE WAPDFYVVTY GDK+ R V+R+++ S+ED A R GK   R++    +KFHVLLTSYE
Sbjct: 768  FEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYE 827

Query: 375  LITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELF 434
            LIT D A+LGSIEWA LVVDEAHRLK+NQSKFF+ L+ Y I  KLLLTGTPLQNNLEELF
Sbjct: 828  LITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELF 887

Query: 435  HLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFI 494
            HLLNFLTPE+FN+L  F  EFADISKE+Q+K+LHDLLGPHMLRRLKADV KNMP+K+E I
Sbjct: 888  HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 947

Query: 495  VRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAP 554
            VRVELS MQKKYYK+ILTRNFEALN KGGG QVSLLNIMMDLKKCCNHPYLFP AA EAP
Sbjct: 948  VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP 1007

Query: 555  V-QGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTI 613
            V   G Y+  +L +++GKL+LL KMLKKL+++GHR  I                      
Sbjct: 1008 VLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLI---------------------- 1045

Query: 614  YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNIT 673
                                          F  MTKMLD+LED+L+ EGYKYERIDG IT
Sbjct: 1046 ------------------------------FSQMTKMLDLLEDFLEYEGYKYERIDGGIT 1075

Query: 674  GSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 733
            G +RQE+IDRFNAPGA QF FLLSTR+GGLGINLATADTVIIYDSDWNPHNDIQAFSRAH
Sbjct: 1076 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1135

Query: 734  RIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
            RI                                     GQ  KVMIYRFVTR SVEER+
Sbjct: 1136 RI-------------------------------------GQNKKVMIYRFVTRASVEERI 1158

Query: 794  TQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFKEEEE 841
            TQVAKRKMMLTHLVVRPG+G K  + TKQELDDIL+FGTEELFK++ E
Sbjct: 1159 TQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVE 1206



 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 27/120 (22%)

Query: 847  EIIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQT--------DDENDDDD 898
            EIIKQE EN DP YW KLLRHHYEQ QED++R LGKGKR+RKQ         D E  D+ 
Sbjct: 1307 EIIKQE-ENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDEL 1365

Query: 899  FDEKNDGDL----------------TGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLN 942
             D +++  +                +GRR ++++   K +RD+PLPPLLARVGGNIEVL 
Sbjct: 1366 SDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQ--LKSDRDKPLPPLLARVGGNIEVLG 1423



 Score = 77.0 bits (188), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 48/55 (87%), Gaps = 2/55 (3%)

Query: 939  EVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTNPS 993
            +VLNQLEELLSDMK+DV+RLP+ L+RIPPVA RL MSERSILSRL  T+ + +P+
Sbjct: 1859 KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRL--TNRAGDPT 1911


>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
           melanogaster GN=Chd3 PE=2 SV=3
          Length = 892

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/872 (51%), Positives = 550/872 (63%), Gaps = 186/872 (21%)

Query: 79  VYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIKPE 138
           ++H  ++ S+ ++ +    E P+LEE LD++D               L +++YRYGIKPE
Sbjct: 135 LHHASMVASFQRRSD---MEEPSLEE-LDDQDG-------------NLHERFYRYGIKPE 177

Query: 139 WLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRG 198
           WL+  RVIN     +G T+YLVKWR+L Y+ ++WE E++ IPGL ++I  Y K +S  +G
Sbjct: 178 WLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALYKKLRSSNKG 237

Query: 199 KTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 258
           + + +                       PT DL KKYE QP FL + G++LH +Q+EG++
Sbjct: 238 RQRDRP---------------------APTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVS 276

Query: 259 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 318
           WLRYSWGQ I TILADEMGLGKTIQT+ FLYSLFKEGHC+GPFL+S PLST+ NWERE E
Sbjct: 277 WLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELE 336

Query: 319 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITN 378
            WAP+ Y VTYVG K  R V+R H+IS+E+      K  R   +  KF+V+LTSYE I+ 
Sbjct: 337 LWAPELYCVTYVGGKTARAVIRKHEISFEEVTT---KTMRENQTQYKFNVMLTSYEFISV 393

Query: 379 DVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLN 438
           D A LG I+WA LVVDEAHRL+SNQSKFF+ LS Y I  KLLLTGTPLQNNLEELFHLLN
Sbjct: 394 DAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLN 453

Query: 439 FLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVE 498
           FL+  KFNDL +FQAEF D+SKEEQVKRLH++L PHMLRRLKADVLK+MP KSEFIVRVE
Sbjct: 454 FLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVE 513

Query: 499 LSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQ-G 557
           LS MQKK+YK+ILT+NF+ALN KGGG+  SLLNIMMDL+KCCNHPYLFP+AAEEA +   
Sbjct: 514 LSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPS 573

Query: 558 GQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVK 617
           G YE+ +LT+A+GKL LLSKMLK+LK D             +RV+               
Sbjct: 574 GLYEMSSLTKASGKLDLLSKMLKQLKADN------------HRVL--------------- 606

Query: 618 WRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMR 677
                                     F  MTKML++LE +L+GEGY+Y+RIDG+I G +R
Sbjct: 607 -------------------------LFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLR 641

Query: 678 QESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 737
           Q++IDRFN P +  FVFLLSTR+GGLGINLATADTVII+DSDWNPHND+QAFSRAHR+G 
Sbjct: 642 QKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMG- 700

Query: 738 QNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVA 797
                                               Q+ KVMIYRFVT NSVEER+ QVA
Sbjct: 701 ------------------------------------QKKKVMIYRFVTHNSVEERIMQVA 724

Query: 798 KRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFK-------------------- 837
           K KMMLTHLVVRPGMGG   NF+K EL+DILRFGTE+LFK                    
Sbjct: 725 KHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSEAIHYDDKAVADLLDR 784

Query: 838 -----EEEEQPENTEI-------------------IKQEAENQDPAYWVKLLRHHYEQHQ 873
                EE+E   N  +                      +AEN DP YW  L+     +  
Sbjct: 785 TNRGIEEKESWANEYLSSFKVASYATKEDHEEHDDYNNDAENTDPFYWENLMGKSQPKLP 844

Query: 874 E-----------DVSRTLGKGKRVRKQTDDEN 894
           +           DV   +GKGKR+RK+ D  N
Sbjct: 845 KKQKKQSQQSQVDVESIMGKGKRIRKEIDYSN 876


>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
            elegans GN=chd-3 PE=2 SV=2
          Length = 1787

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/778 (53%), Positives = 522/778 (67%), Gaps = 112/778 (14%)

Query: 75   SFLEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDE--ELEKKYYR 132
            + ++VY   L++ Y +K++++   PP  EE         + L+RH+ + +  +L +++Y+
Sbjct: 445  TLMDVYFTALVRMYWRKVDSE--NPPIFEE---------STLSRHHSDHDPYKLRERFYQ 493

Query: 133  YGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKK 192
            YG+KPEW+  +R+IN  +       YLVKW++L Y+ ATWE ++ DI   +++I  Y   
Sbjct: 494  YGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYEDAIIKYWHH 553

Query: 193  KSK------GRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTG 246
            + +       R   K    Q +  G    +    +   ++   D+ KKYE QP F+ +TG
Sbjct: 554  RERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISETG 613

Query: 247  MQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAP 306
              LH YQLEGINWLR+ W    D ILADEMGLGKT+Q++TFLY+L KEGH KGPFL++AP
Sbjct: 614  GNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAP 673

Query: 307  LSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG-KPCRIRS-STV 364
            LSTIINWERE E W PDFYVVTYVGD++ R+V+R+H+ S+ D A RGG K  +I++   +
Sbjct: 674  LSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENL 733

Query: 365  KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
            KFHVLLTSYE I  D A+L SI+WA LVVDEAHRLK+NQS FFK L  Y+IQ ++LLTGT
Sbjct: 734  KFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGT 793

Query: 425  PLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVL 484
            PLQNNLEELFHLLNFL P++FN L SF AEF++ISKE+Q+++LH+LLGPHMLRRLKADVL
Sbjct: 794  PLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVL 853

Query: 485  KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPY 544
              MPSK E IVRVELS MQKKYYK ILTRNF+ALN K GG Q+SL+NI+M+LKKCCNHPY
Sbjct: 854  TGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPY 913

Query: 545  LFPAAAEEAP-VQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVIN 603
            LF  A  EAP ++ G YE  AL + AGK VLL KML+KLK+ GHR  I            
Sbjct: 914  LFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLI------------ 961

Query: 604  SKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGY 663
                                                    F  MT MLDILED+ D EGY
Sbjct: 962  ----------------------------------------FSQMTMMLDILEDFCDVEGY 981

Query: 664  KYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPH 723
            KYERIDG+ITG  RQ++IDR+NAPGA QFVFLLSTR+GGLGINLATADTVIIYDSDWNPH
Sbjct: 982  KYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPH 1041

Query: 724  NDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRF 783
            NDIQAFSRAHR+G                                     Q++KVMIYRF
Sbjct: 1042 NDIQAFSRAHRLG-------------------------------------QKHKVMIYRF 1064

Query: 784  VTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQA-NFTKQELDDILRFGTEELFKEEE 840
            VT+ SVEER+T VAK+KM+LTHLVVR G+G K   + +K ELDD+LR+GTEELFKEEE
Sbjct: 1065 VTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTELDDVLRWGTEELFKEEE 1122



 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 18/114 (15%)

Query: 846  TEIIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTD--DENDDDDFDEKN 903
            TE+IK+  E QDP YW KLL+HHYEQ QE   + LGKGKRVR+Q +   EN   D+  +N
Sbjct: 1199 TEVIKEGTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQN 1258

Query: 904  DG----DLTGRRSAKKKEMSKQERD------------RPLPPLLARVGGNIEVL 941
            +     D      +   E+ + + D              LPPLLA+V G IEVL
Sbjct: 1259 NQQQEEDDGSEYGSDNGELLQTDEDYEERRRRREERSEKLPPLLAKVNGQIEVL 1312



 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 3/56 (5%)

Query: 940  VLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTNPSSA 995
             L QL++LLSD+K+DV+RLPAT++++ PV +RL MSER ILSRL     + +P +A
Sbjct: 1644 CLAQLDDLLSDLKTDVARLPATISQVRPVTERLQMSERQILSRLV---VAKDPDAA 1696


>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
          Length = 1829

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/795 (51%), Positives = 526/795 (66%), Gaps = 116/795 (14%)

Query: 76   FLEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDE--ELEKKYYRY 133
             LEV+   L+  Y +K  ND   PP  EE +          +RH+ +++  +L +++Y+Y
Sbjct: 434  LLEVHFRMLILLYWRK--NDSDAPPEFEESV---------TSRHHSDNDPYKLRERFYQY 482

Query: 134  GIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKK 193
            GIKPEW+  +R+IN ++       YLVKW++L YD+ATWE ++ +I   +E+I  Y + +
Sbjct: 483  GIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHR 542

Query: 194  SKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTT-------DLRKKYEKQPPFLDDTG 246
                 +   K +Q+     +  +  +  PP E           D+RKKYE QP ++ +TG
Sbjct: 543  ESKLNEDIPKNVQK---MIAKHREAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETG 599

Query: 247  MQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAP 306
             +LH YQLEG+NWLR+ W    D ILADEMGLGKT+Q++TFLYSL KEGHCKGPFL++AP
Sbjct: 600  GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 659

Query: 307  LSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGG-KPCRIRSS-TV 364
            LSTIINWERE E W PDFYVVTYVG +D R+VLR+H+ S+ + A R G K  +++++  +
Sbjct: 660  LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENM 719

Query: 365  KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
            KFHVLLTSYE I  D  +L SIEW  LVVDEAHRLK+NQS FFK L+ Y+I  ++LLTGT
Sbjct: 720  KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 779

Query: 425  PLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVL 484
            PLQNNLEELFHLLNFL+ E+FN L +F AEF +ISKE+Q+++LH+LLGPHMLRRLKADVL
Sbjct: 780  PLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVL 839

Query: 485  KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPY 544
              MPSKSE IVRVELS MQKK+YK ILTRNF+ALN K GG Q+SL+N++M+LKKCCNHPY
Sbjct: 840  TGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPY 899

Query: 545  LFPAAAEEAPVQ-GGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVIN 603
            LF  A  EAP +  G YE  AL + +GK VLL KML+KLK+ GHR  I            
Sbjct: 900  LFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLI------------ 947

Query: 604  SKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGY 663
                                                    F  MT+MLDI+ED  + EGY
Sbjct: 948  ----------------------------------------FSQMTRMLDIMEDLCEYEGY 967

Query: 664  KYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPH 723
            +YERIDG+I G MRQ++IDR+NAPGA QF+FLLSTR+GGLGINLATADTVIIYDSDWNPH
Sbjct: 968  RYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPH 1027

Query: 724  NDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRF 783
            NDIQAFSRAHR+G                                     Q++KVMIYRF
Sbjct: 1028 NDIQAFSRAHRLG-------------------------------------QKHKVMIYRF 1050

Query: 784  VTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQA-NFTKQELDDILRFGTEELFKEEEEQ 842
            VT+ SVEE++T VAK+KM+L HLVVR G+GGK+    +K ELDD+LR+GTEELF E+ + 
Sbjct: 1051 VTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSEDLDA 1110

Query: 843  PENTEIIKQEAENQD 857
             E     K+ A  Q+
Sbjct: 1111 AEGEGSEKKGAAAQE 1125



 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 19/113 (16%)

Query: 848  IIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTD--DENDDDDFDEKN-- 903
            +IK++ +  DP YW KLL+HHYEQ +E   + LGKGKRVRKQ +   EN   D+ ++N  
Sbjct: 1188 VIKEDEKEPDPDYWEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQT 1247

Query: 904  --------------DGDLTGRRSAKKKEMSKQERD-RPLPPLLARVGGNIEVL 941
                          +GD          E  K+ RD   +PPL+A+V G +E+L
Sbjct: 1248 QDDDDDNESYRGSDNGDGLNSDEDDYDEKKKRRRDEEKMPPLMAKVNGQVEIL 1300



 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 36/44 (81%)

Query: 940  VLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRL 983
             L QL+E+LSDMK+DVSRLP+T  ++  V +RL+M+ER ILSRL
Sbjct: 1655 TLVQLDEILSDMKADVSRLPSTFTQLATVTERLNMTERQILSRL 1698


>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
           thaliana GN=PKL PE=1 SV=1
          Length = 1384

 Score =  540 bits (1390), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 306/715 (42%), Positives = 412/715 (57%), Gaps = 129/715 (18%)

Query: 134 GIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKK 193
            I+PEW   +R++  +   DG   YLVK+++L YD+  WE E+ DI   +  I+ +    
Sbjct: 184 AIRPEWTTVDRILACRE-EDGELEYLVKYKELSYDECYWESES-DISTFQNEIQRFKDVN 241

Query: 194 SKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQ 253
           S+ R   ++K++    +      PR +            ++++  P FL   G+ LH YQ
Sbjct: 242 SRTR---RSKDVDHKRN------PRDF------------QQFDHTPEFL--KGL-LHPYQ 277

Query: 254 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 313
           LEG+N+LR+SW +    ILADEMGLGKTIQ+I  L SLF+E     P LV APLST+ NW
Sbjct: 278 LEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNW 335

Query: 314 EREFETWAPDFYVVTYVGDKDCRIVLRDHD--ISWEDTANRGGKPCRIRSST----VKFH 367
           EREF TWAP   VV Y G    R V+R+H+  +S +    +  K  +I S +    +KF 
Sbjct: 336 EREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFD 395

Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQ 427
           VLLTSYE+I  D A+L  I+W  ++VDE HRLK+  SK F  L+ YS  +++LLTGTPLQ
Sbjct: 396 VLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQ 455

Query: 428 NNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNM 487
           NNL+ELF L++FL   KF  L  FQ EF DI++EEQ+ RLH +L PH+LRR+K DV+K+M
Sbjct: 456 NNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDM 515

Query: 488 PSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP 547
           P K E I+RV+LS +QK+YYK I TRN++ L  KGG  Q+SL NIMM+L+K C HPY+  
Sbjct: 516 PPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGA-QISLNNIMMELRKVCCHPYMLE 574

Query: 548 AAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTL 607
               E  +       + L  + GKL LL KM+ KLKE GHR  I                
Sbjct: 575 GV--EPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLI---------------- 616

Query: 608 RDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYER 667
                                               +     MLD+LEDY   + ++YER
Sbjct: 617 ------------------------------------YTQFQHMLDLLEDYCTHKKWQYER 640

Query: 668 IDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQ 727
           IDG + G+ RQ  IDRFNA  +++F FLLSTR+GGLGINLATADTVIIYDSDWNPH D+Q
Sbjct: 641 IDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 700

Query: 728 AFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRN 787
           A +RAHR+G                                     Q NKVMIYR + R 
Sbjct: 701 AMARAHRLG-------------------------------------QTNKVMIYRLINRG 723

Query: 788 SVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFKEEEEQ 842
           ++EER+ Q+ K+KM+L HLVV      K  N  ++ELDDI+R+G++ELF  E+++
Sbjct: 724 TIEERMMQLTKKKMVLEHLVVGK---LKTQNINQEELDDIIRYGSKELFASEDDE 775



 Score = 37.0 bits (84), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 850 KQEAENQDPA-YWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTDDENDDDDF---DEKNDG 905
           K  A N D A YW +LL+  +E HQ +    LGK KR RKQ     +DD     D  +DG
Sbjct: 843 KSSAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQLVSIEEDDLAGLEDVSSDG 902

Query: 906 D 906
           D
Sbjct: 903 D 903


>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
            melanogaster GN=Chd1 PE=1 SV=1
          Length = 1883

 Score =  503 bits (1295), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 304/810 (37%), Positives = 440/810 (54%), Gaps = 168/810 (20%)

Query: 153  DGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGA 212
            DG+  YL KW+ LPY ++TWED    +   +   E +N ++S                  
Sbjct: 453  DGTEEYLCKWQSLPYAESTWEDAALVLRKWQRCAEQFNDRESS----------------- 495

Query: 213  SGSKPRRYTPPPEKPTTDLRKKYEK---QPPFLDDTGMQLHAYQLEGINWLRYSWGQNID 269
                  + TP         R K+ +   QP FL  +G+ L  YQ++G+NWL +SW +   
Sbjct: 496  ------KCTPSRHCRVIKYRPKFSRIKNQPEFLS-SGLTLRDYQMDGLNWLLHSWCKENS 548

Query: 270  TILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTY 329
             ILADEMGLGKTIQTI FLYSLFK  H  GPFL   PLST+  W+REF+ WAPD  VVTY
Sbjct: 549  VILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTY 608

Query: 330  VGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWA 389
            +GD   R +++ ++  +E             S  +KF+ +LT+YE++  D   LG+++WA
Sbjct: 609  LGDIKSRELIQQYEWQFES------------SKRLKFNCILTTYEIVLKDKQFLGTLQWA 656

Query: 390  VLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLT 449
             L+VDEAHRLK++ S  +K L  +   ++LL+TGTPLQN+L+EL+ LL+F+ P+KF+   
Sbjct: 657  ALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWE 716

Query: 450  SFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY 509
            +F+ +  + ++++   RLH  L P++LRR+K DV K++P+K E I+RVE++ +QK+YYK+
Sbjct: 717  NFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKW 775

Query: 510  ILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF-PAAAEEAPVQGGQYEIQALTRA 568
            ILT+NF+AL     G   + LNI+++LKKCCNH  L  P+  E   +Q  +  +Q L + 
Sbjct: 776  ILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE-ALQTLLKG 834

Query: 569  AGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATW 628
            +GKLVLL K+L +LKE GHR  I                                     
Sbjct: 835  SGKLVLLDKLLCRLKETGHRVLI------------------------------------- 857

Query: 629  EDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPG 688
                           F  M +MLD+L DYL    + ++R+DG+I G MR++++D FNA G
Sbjct: 858  ---------------FSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEG 902

Query: 689  ASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATAD 748
            +  F FLLSTR+GGLGINLATADTVII+DSDWNP ND+QA +RAHRIG            
Sbjct: 903  SQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIG------------ 950

Query: 749  TVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 808
                                     Q+N+V IYR VT  SVEE++ + AK+KM+L HLV+
Sbjct: 951  -------------------------QKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVI 985

Query: 809  R--------------PGMGGKQANFTKQELDDILRFGTEELFKEEEEQPEN-----TEII 849
            +               G       F K +L  IL+FG EELFK+E+E  ++      EI+
Sbjct: 986  QRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEIL 1045

Query: 850  KQ-EAENQDP---------AYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTDDENDDDDF 899
            ++ E  N+DP         A+ V  +    E+  + VS+   + +    + DD  D DD 
Sbjct: 1046 RRAETRNEDPEMPADDLLSAFKVASIAAFEEEPSDSVSK---QDQNAAGEEDDSKDWDDI 1102

Query: 900  DEKNDGDLTGRRSAKKKEMSKQERDRPLPP 929
              +       R++   +E +K+  D  LPP
Sbjct: 1103 IPEG-----FRKAIDDQERAKEMEDLYLPP 1127


>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
           PE=1 SV=2
          Length = 1828

 Score =  489 bits (1258), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 284/709 (40%), Positives = 398/709 (56%), Gaps = 144/709 (20%)

Query: 158 YLVKWRDLPYDKATWEDENEDIPGLKESIE-FYNKKKSKGRGKTKTKELQEDEDGASGSK 216
           YL KW  LPY + +WEDE       +  I+ F+++  SK     + K L++        +
Sbjct: 413 YLCKWMGLPYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTRECKALKQ--------R 464

Query: 217 PRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEM 276
           PR                 +KQP +L    ++L  YQLEG+NWL +SW +N   ILADEM
Sbjct: 465 PRFVA-------------LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEM 511

Query: 277 GLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 336
           GLGKTIQTI+FL  LF +    GPFL+  PLST+ +W+REFE WAP+  VV Y+GD   R
Sbjct: 512 GLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSR 571

Query: 337 IVLRDHDISWEDTANRGGKPCRIRSST--VKFHVLLTSYELITNDVALLGSIEWAVLVVD 394
             +R+++  W            I S T  +KF+ L+T+YE++  D  +LGSI WA L VD
Sbjct: 572 NTIREYE--W------------IHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVD 617

Query: 395 EAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAE 454
           EAHRLK++ S  +K L  +   ++LL+TGTPLQN+L+EL+ LL+F+ PEKF     F+ +
Sbjct: 618 EAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEED 677

Query: 455 FADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
                +E   + LH +L P +LRR+K DV K++P+K E I+RVE+S +QK+YYK+ILTRN
Sbjct: 678 HGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRN 736

Query: 515 FEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVL 574
           ++AL     G     LNI+M+LKKCCNH YL     EE   + GQ  + +L R++GKL+L
Sbjct: 737 YKALAKGTRGSTSGFLNIVMELKKCCNHCYLI-KPPEENERENGQEILLSLIRSSGKLIL 795

Query: 575 LSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENED 634
           L K+L +L+E G+R  I                                           
Sbjct: 796 LDKLLTRLRERGNRVLI------------------------------------------- 812

Query: 635 IPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVF 694
                    F  M +MLDIL +YL  + Y ++R+DG+I G +R++++D FNA G+  F F
Sbjct: 813 ---------FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCF 863

Query: 695 LLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYD 754
           LLSTR+GGLGINLA+ADTV+I+DSDWNP ND+QA +RAHRI                   
Sbjct: 864 LLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI------------------- 904

Query: 755 SDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR----- 809
                             GQ+ +V IYR VT+ +VEE + + AK+KM+L HLV++     
Sbjct: 905 ------------------GQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTT 946

Query: 810 ------PGMGGKQAN-FTKQELDDILRFGTEELFKE---EEEQPENTEI 848
                    G   +N F K+EL  IL+FG E+LFKE   EE +P+  +I
Sbjct: 947 GRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDI 995


>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
           / ATCC 24843) GN=hrp1 PE=1 SV=1
          Length = 1373

 Score =  471 bits (1213), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/736 (38%), Positives = 392/736 (53%), Gaps = 138/736 (18%)

Query: 138 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGR 197
           E+ I  R++ S+T  +G T Y VKWR LPYD  TWED   D+       E Y        
Sbjct: 302 EYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWEDA--DVIYSMAPNEVY-------- 351

Query: 198 GKTKTKELQEDEDGASGSKPRRY-TPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 256
                + LQ +       K   Y T PP        +K EKQP ++   G ++  +QL G
Sbjct: 352 -----QFLQRENSPYLPYKGVFYNTRPP-------YRKLEKQPSYI--KGGEIRDFQLTG 397

Query: 257 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 316
           INW+ Y W +N + ILADEMGLGKT+QT+ FL  L       GPFL+  PLST+  W+  
Sbjct: 398 INWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQET 457

Query: 317 FETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELI 376
              W PD   + Y G+ + R  +R+++                 S  +KF++LLT+YE I
Sbjct: 458 LANWTPDLNSICYTGNTESRANIREYEFY-----------LSTNSRKLKFNILLTTYEYI 506

Query: 377 TNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHL 436
             D   L +I W  L +DEAHRLK+++S  ++ LS +   N+LL+TGTPLQNNL+EL  L
Sbjct: 507 LKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASL 566

Query: 437 LNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVR 496
           +NFL P KF        +  +  +E  ++ L + L P +LRRLK DV K++PSKSE I+R
Sbjct: 567 VNFLMPGKFYIRDELNFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILR 626

Query: 497 VELSPMQKKYYKYILTRNFEALNPKGGGQ-QVSLLNIMMDLKKCCNHPYLFPAAAEE--- 552
           VELS MQ ++YK ILT+N+ AL     G+ Q+SLLNI+++LKK  NHPYLFP AAE+   
Sbjct: 627 VELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMM 686

Query: 553 APVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGST 612
                 +  ++ +   +GK+VLL K+L++LK DGHR  I                     
Sbjct: 687 GRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLI--------------------- 725

Query: 613 IYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNI 672
                                          F  M +ML+IL +Y+   GY Y+R+DG I
Sbjct: 726 -------------------------------FSQMVRMLNILGEYMSLRGYNYQRLDGTI 754

Query: 673 TGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRA 732
             S+R+ SID FNAP +  FVFLLSTR+GGLGINL TADTVII+DSDWNP  D+QA +RA
Sbjct: 755 PASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARA 814

Query: 733 HRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEER 792
           HRIG                                     Q+N V +YRF+++++VEE 
Sbjct: 815 HRIG-------------------------------------QKNHVNVYRFLSKDTVEED 837

Query: 793 VTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFGTEELFKEEEEQPE--- 844
           + + A+RKM+L + ++  G+  K  N     +  QEL  IL+FG   +FK  E Q +   
Sbjct: 838 ILERARRKMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLEN 897

Query: 845 -NTEIIKQEAENQDPA 859
            N + I   AE++D +
Sbjct: 898 MNLDDILSHAEDRDSS 913


>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
            PE=1 SV=3
          Length = 2997

 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 284/727 (39%), Positives = 391/727 (53%), Gaps = 144/727 (19%)

Query: 135  IKPEWLIANRVINSKTLRDGS----TIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 190
              P+++  +R+++     D      T YLVKW  LPY+ +TWE   +DI   K  IE + 
Sbjct: 877  FNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWE-RRQDIDQAK--IEEFE 933

Query: 191  KKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLH 250
            K  S+   + +T+ +                   E+P  D  KK E    + ++   +L 
Sbjct: 934  KLMSR---EPETERV-------------------ERPPADDWKKSESSREYKNNN--KLR 969

Query: 251  AYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTI 310
             YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFLY ++ +G   GPFLV APLSTI
Sbjct: 970  EYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKG-IHGPFLVIAPLSTI 1028

Query: 311  INWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLL 370
             NWEREF TW  +  VV Y G +  R  ++ +++ ++D   R      +   + KFH ++
Sbjct: 1029 PNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGR------VIKGSYKFHAII 1081

Query: 371  TSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNL 430
            T++E+I  D   L +I W  +V+DEAHRLK+   K  + L    +++K+LLTGTPLQN +
Sbjct: 1082 TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV 1141

Query: 431  EELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSK 490
            EELF LL+FL P +F   T+F  EF D+  EEQV++L  +L P MLRRLK DV KN+  K
Sbjct: 1142 EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK 1201

Query: 491  SEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPA 548
             E I+ VEL+ +QKKYY+ IL +NF  L+ KGGGQ    +LLN MM+L+KCCNHPYL   
Sbjct: 1202 EETIIEVELTNIQKKYYRAILEKNFTFLS-KGGGQANVPNLLNTMMELRKCCNHPYLING 1260

Query: 549  AAEEA--------PVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANR 600
            A E+           +   +++QA+ +AAGKLVL+ K+L KLK  GHR  I         
Sbjct: 1261 AEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI--------- 1311

Query: 601  VINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDG 660
                                                       F  M + LDILEDYL  
Sbjct: 1312 -------------------------------------------FSQMVRCLDILEDYLIQ 1328

Query: 661  EGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDW 720
              Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT II+DSDW
Sbjct: 1329 RRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1388

Query: 721  NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI 780
            NP ND+QA +R HR                                     IGQ   V I
Sbjct: 1389 NPQNDLQAQARCHR-------------------------------------IGQSKSVKI 1411

Query: 781  YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFGTEEL 835
            YR +TRNS E  +   A  K+ L   V++   G + A       +K+E++D+LR G    
Sbjct: 1412 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGA 1471

Query: 836  FKEEEEQ 842
              +EE++
Sbjct: 1472 LMDEEDE 1478


>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
            PE=1 SV=1
          Length = 2986

 Score =  464 bits (1195), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 284/727 (39%), Positives = 392/727 (53%), Gaps = 144/727 (19%)

Query: 135  IKPEWLIANRVINSKTLRD--GSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 190
              P+++  +R+++     D  G  +  YLVKW  LPY+ +TWE        LK+ I+   
Sbjct: 867  FNPDYVEVDRIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWE--------LKQDID--- 915

Query: 191  KKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLH 250
                    +TK +E ++        +P   T   E+P  D  KK E    + ++   +L 
Sbjct: 916  --------QTKIEEFEK----LMSREPE--TERVERPPADDWKKSESSREYKNNN--KLR 959

Query: 251  AYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTI 310
             YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFLY ++ +G   GPFLV APLSTI
Sbjct: 960  EYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKG-IHGPFLVIAPLSTI 1018

Query: 311  INWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLL 370
             NWEREF TW  +  VV Y G +  R  ++ +++ ++D   R      +   + KFH ++
Sbjct: 1019 PNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGR------VIKGSYKFHAII 1071

Query: 371  TSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNL 430
            T++E+I  D   L +I W  +V+DEAHRLK+   K  + L    +++K+LLTGTPLQN +
Sbjct: 1072 TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV 1131

Query: 431  EELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSK 490
            EELF LL+FL P +F   T+F  EF D+  EEQV++L  +L P MLRRLK DV KN+  K
Sbjct: 1132 EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK 1191

Query: 491  SEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPA 548
             E I+ VEL+ +QKKYY+ IL +NF  L+ KGGGQ    +LLN MM+L+KCCNHPYL   
Sbjct: 1192 EETIIEVELTNIQKKYYRAILEKNFTFLS-KGGGQANVPNLLNTMMELRKCCNHPYLING 1250

Query: 549  AAEEA--------PVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANR 600
            A E+           +   +++QA+ +AAGKLVL+ K+L KLK  GHR  I         
Sbjct: 1251 AEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI--------- 1301

Query: 601  VINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDG 660
                                                       F  M + LDILEDYL  
Sbjct: 1302 -------------------------------------------FSQMVRCLDILEDYLIQ 1318

Query: 661  EGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDW 720
              Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT II+DSDW
Sbjct: 1319 RRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1378

Query: 721  NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI 780
            NP ND+QA +R HR                                     IGQ   V I
Sbjct: 1379 NPQNDLQAQARCHR-------------------------------------IGQSKSVKI 1401

Query: 781  YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFGTEEL 835
            YR +TRNS E  +   A  K+ L   V++   G + A       +K+E++D+LR G    
Sbjct: 1402 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGA 1461

Query: 836  FKEEEEQ 842
              +EE++
Sbjct: 1462 LMDEEDE 1468


>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
            PE=2 SV=1
          Length = 3011

 Score =  463 bits (1191), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 284/727 (39%), Positives = 390/727 (53%), Gaps = 144/727 (19%)

Query: 135  IKPEWLIANRVIN-SKTLRDGS---TIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 190
              P+++  +R+++ S++  D     T YLVKW  LPY+ +TWE + +DI   K  IE + 
Sbjct: 878  FNPDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELK-QDIDQAK--IEEFE 934

Query: 191  KKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLH 250
            K  S+     +                       E+P  D  KK E    + ++   +L 
Sbjct: 935  KLMSREPEMERV----------------------ERPPADDWKKSESSREYKNNN--KLR 970

Query: 251  AYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTI 310
             YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFLY ++ +G   GPFLV APLSTI
Sbjct: 971  EYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKG-IHGPFLVIAPLSTI 1029

Query: 311  INWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLL 370
             NWEREF TW  +  VV Y G +  R  ++ +++ ++D   R      +   + KFH ++
Sbjct: 1030 PNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGR------VIKGSYKFHAII 1082

Query: 371  TSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNL 430
            T++E+I  D   L +I W  +V+DEAHRLK+   K  + L    +++K+LLTGTPLQN +
Sbjct: 1083 TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV 1142

Query: 431  EELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSK 490
            EELF LL+FL P +F   T+F  EF D+  EEQV++L  +L P MLRRLK DV KN+  K
Sbjct: 1143 EELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK 1202

Query: 491  SEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPA 548
             E I+ VEL+ +QKKYY+ IL +NF  L+ KGGGQ    +LLN MM+L+KCCNHPYL   
Sbjct: 1203 EETIIEVELTNIQKKYYRAILEKNFAFLS-KGGGQANVPNLLNTMMELRKCCNHPYLING 1261

Query: 549  AAEEA--------PVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANR 600
            A E+               +++QA+ +AAGKLVL+ K+L KLK  GHR  I         
Sbjct: 1262 AEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI--------- 1312

Query: 601  VINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDG 660
                                                       F  M + LDILEDYL  
Sbjct: 1313 -------------------------------------------FSQMVRCLDILEDYLIQ 1329

Query: 661  EGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDW 720
              Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT II+DSDW
Sbjct: 1330 RRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1389

Query: 721  NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI 780
            NP ND+QA +R HR                                     IGQ   V I
Sbjct: 1390 NPQNDLQAQARCHR-------------------------------------IGQSKSVKI 1412

Query: 781  YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN-----FTKQELDDILRFGTEEL 835
            YR +TRNS E  +   A  K+ L   V++   G + A       +K+E++D+LR G    
Sbjct: 1413 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGA 1472

Query: 836  FKEEEEQ 842
              +EE++
Sbjct: 1473 LMDEEDE 1479


>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
           / ATCC 24843) GN=hrp3 PE=1 SV=1
          Length = 1388

 Score =  463 bits (1191), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 288/770 (37%), Positives = 410/770 (53%), Gaps = 141/770 (18%)

Query: 106 LDEEDKRMARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDL 165
           LD E +      R +I   ++EK+  R   + E+   +R++      DGS  YLVKW+ L
Sbjct: 255 LDREIREDPTTTREDIEAMDIEKERKRENYE-EYKQVDRIVAKHLNSDGSVEYLVKWKQL 313

Query: 166 PYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGA-SGSKPRRYTPPP 224
            YD  TWE        + E I             T+ +  QE E+ A S S+   Y    
Sbjct: 314 LYDFCTWE-----ASSIIEPI-----------AATEIQAFQEREESALSPSRGTNYGNSR 357

Query: 225 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 284
            K      +K E+QP ++  TG +L  +QL G+NW+ Y W +N + ILADEMGLGKT+QT
Sbjct: 358 PK-----YRKLEQQPSYI--TGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQT 410

Query: 285 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 344
           + FL  L       GPFLV  PLST+  W+     WA D   ++Y+G+   R V+RD++ 
Sbjct: 411 VAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEF 470

Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
             + T              +KF++LLT+YE +  D ++L +I+W  + +DEAHRLK+++S
Sbjct: 471 YVDGTQK------------IKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSES 518

Query: 405 KFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQV 464
             ++ LS +   N+LL+TGTPLQNN+ EL  L++FL P KF        E  D  +E  +
Sbjct: 519 SLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKFEIREEINLEAPDEEQEAYI 578

Query: 465 KRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALN-PKGG 523
           + L + L P++LRRLK DV K++PSKSE I+RVELS +Q  +YK ILTRN+  L      
Sbjct: 579 RSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISS 638

Query: 524 GQQVSLLNIMMDLKKCCNHPYLFPAAAE----EAPVQGGQYEI-QALTRAAGKLVLLSKM 578
           G Q+SLLNI+++LKK  NHPYLF    E    +   QG + E+ + L   +GK+VLL K+
Sbjct: 639 GSQISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKL 698

Query: 579 LKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGL 638
           L +L+ DGHR  I                                               
Sbjct: 699 LSRLRRDGHRVLI----------------------------------------------- 711

Query: 639 KESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLST 698
                F  M +MLDIL DYL   GY ++R+DG +  ++R+ SID FNAP +  FVFLLST
Sbjct: 712 -----FSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLST 766

Query: 699 RSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWN 758
           R+GGLGINL TADTVII+DSDWNP  D+QA +RAHRIG                      
Sbjct: 767 RAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG---------------------- 804

Query: 759 PHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN 818
                          Q+N VM+YR ++++++EE V + A+RKM+L + ++  G+  KQ N
Sbjct: 805 ---------------QKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKN 849

Query: 819 -----FTKQELDDILRFGTEELFKEEEEQPE----NTEIIKQEAENQDPA 859
                F+ +EL  IL+FG   +FK E  Q +    N + I + AE+ D +
Sbjct: 850 SKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEILEHAEDHDTS 899


>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
            PE=1 SV=2
          Length = 2897

 Score =  463 bits (1191), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/727 (38%), Positives = 392/727 (53%), Gaps = 147/727 (20%)

Query: 137  PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNK 191
            P+++  +RV+      D  T      YLVKW  LPY+ +TWE        LKE ++    
Sbjct: 770  PDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWE--------LKEDVDL--- 818

Query: 192  KKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
                     K +E ++ +  AS    RR   PP    +++ KK ++   +    G QL  
Sbjct: 819  --------AKIEEFEQLQ--ASRPDTRRLDRPP----SNIWKKIDQSRDY--KNGNQLRE 862

Query: 252  YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
            YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFLY +   G  +GPFL+ APLSTI 
Sbjct: 863  YQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIA 921

Query: 312  NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLT 371
            NWEREF TW  D  VV Y G    R +++ +++ + D+  R      I     +F  ++T
Sbjct: 922  NWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR------IIRGAYRFQAIIT 974

Query: 372  SYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLE 431
            ++E+I      L +IEW  +++DEAHRLK+   K  + L   ++++K+LLTGTPLQN +E
Sbjct: 975  TFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1034

Query: 432  ELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKS 491
            ELF LL+FL P +F   ++F  EF D+  EEQV++L  +L P MLRRLK DV K +  K 
Sbjct: 1035 ELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKE 1094

Query: 492  EFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAA 549
            E I+ VEL+ +QKKYY+ IL +NF  L+ KG GQ    +L+N MM+L+KCCNHPYL   A
Sbjct: 1095 ETIIEVELTNIQKKYYRAILEKNFSFLS-KGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153

Query: 550  AEEAPVQ--------GGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
             E+   +           + +QA+ ++AGKLVL+ K+L K+K  GH+  I          
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI---------- 1203

Query: 602  INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                      F  M + LDILEDYL  +
Sbjct: 1204 ------------------------------------------FSQMVRCLDILEDYLIHK 1221

Query: 662  GYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWN 721
             Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT II+DSDWN
Sbjct: 1222 RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1281

Query: 722  PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
            P ND+QA +R HRIG QNK                                     V +Y
Sbjct: 1282 PQNDLQAQARCHRIG-QNK------------------------------------AVKVY 1304

Query: 782  RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFGTEEL 835
            R VTRNS E  +   A  K+ L   V++  M G+++N       +K+E++D+LR G    
Sbjct: 1305 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRESNVGGIQQLSKKEIEDLLRRGAYGA 1363

Query: 836  FKEEEEQ 842
              EEE++
Sbjct: 1364 IMEEEDE 1370


>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
           PE=1 SV=1
          Length = 1365

 Score =  460 bits (1183), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 289/741 (39%), Positives = 401/741 (54%), Gaps = 152/741 (20%)

Query: 144 RVI--NSKTLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGK 199
           R+I   ++ L  G T   Y  KW  LPY  ATWED           +E +          
Sbjct: 115 RIIAEQNRELEGGGTAHEYFCKWESLPYADATWEDAVLIEKRWPVEVEHF---------- 164

Query: 200 TKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKY---EKQPPFL-DDTGMQLHAYQLE 255
            K++E       A+ S P R+ P  ++     R K+   ++QP ++  D+   L  YQ++
Sbjct: 165 -KSRE-------AAKSTPSRHCPVLKR-----RPKFHQIKEQPEYVGKDSSYHLRDYQMD 211

Query: 256 GINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWER 315
           G+NWL +SW ++   ILADEMGLGKTIQTI FLY LFK  H  GPFL   PLST+  W+R
Sbjct: 212 GLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQR 271

Query: 316 EFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYEL 375
           EF+ WAPD  VVTY+GD   R ++R  + S+              S  +KF+ +LT+YE+
Sbjct: 272 EFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSS------------SKRLKFNAILTTYEI 319

Query: 376 ITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFH 435
           +  D   L S  WA L+VDEAHRLK++ S  +K L  +   ++LL+TGTPLQN+L+EL+ 
Sbjct: 320 LLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWA 379

Query: 436 LLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIV 495
           LL+F+ P KF     F+ +  D +  +  ++LH  L P +LRR K DV K++P+K E I+
Sbjct: 380 LLHFIMPYKFESWEDFEKDHEDAAT-KGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQIL 438

Query: 496 RVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLF-PAAAEEAP 554
           RVE++ +QK+YYK+ILT+N+ AL     G   + +NI+++LKKCCNH  L  P   E   
Sbjct: 439 RVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINIVIELKKCCNHALLTKPEDFESRA 498

Query: 555 VQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIY 614
                  ++ L R +GKL+LL K+L +LKE GHR  I                       
Sbjct: 499 SLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLI----------------------- 535

Query: 615 LVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITG 674
                                        F  M +MLDIL +YL    + ++R+DG+I G
Sbjct: 536 -----------------------------FSQMVRMLDILAEYLQRRHFPFQRLDGSIKG 566

Query: 675 SMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR 734
            +R++++D FNA G+  F FLLSTR+GGLGINLATADTVII+DSDWNP ND+QA +RAHR
Sbjct: 567 ELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHR 626

Query: 735 IGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVT 794
           IG                                     Q+N+V IYR VT  SVEE + 
Sbjct: 627 IG-------------------------------------QKNQVNIYRLVTARSVEEDIV 649

Query: 795 QVAKRKMMLTHLVV------------RPGMGGKQAN--FTKQELDDILRFGTEELFKEEE 840
           + AKRKM+L HLV+            +    G  AN  F K++L+ IL+FG EELFK++E
Sbjct: 650 ERAKRKMVLDHLVIQRMDTTGKTVLNKRDASGTTANNPFNKEDLNAILKFGAEELFKDDE 709

Query: 841 EQPE----NTEIIKQEAENQD 857
           E  E    + + I Q AE +D
Sbjct: 710 ENDEDPVCDIDEILQRAETRD 730


>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
            PE=1 SV=2
          Length = 2885

 Score =  459 bits (1182), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/727 (38%), Positives = 390/727 (53%), Gaps = 147/727 (20%)

Query: 137  PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNK 191
            P+++  +R++      D  T      YLVKW  LPY+ +TWE        LKE ++    
Sbjct: 769  PDYVEVDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWE--------LKEDVDL--- 817

Query: 192  KKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
                     K +E ++ +  AS    R    PP    +++ KK E+   +    G QL  
Sbjct: 818  --------AKIEEFEQLQ--ASRPDTRHLDRPP----SNIWKKIEQSREY--KNGNQLRE 861

Query: 252  YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
            YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFLY +   G  +GPFL+ APLSTI 
Sbjct: 862  YQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIA 920

Query: 312  NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLT 371
            NWEREF TW  D  VV Y G    R +++ +++ + D+  R      I     +F  ++T
Sbjct: 921  NWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR------IIRGAYRFQAIIT 973

Query: 372  SYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLE 431
            ++E+I      L +I+W  +++DEAHRLK+   K  + L   ++++K+LLTGTPLQN +E
Sbjct: 974  TFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1033

Query: 432  ELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKS 491
            ELF LL+FL P +F   ++F  EF D+  EEQV++L  +L P MLRRLK DV K +  K 
Sbjct: 1034 ELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKE 1093

Query: 492  EFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYLFPAA 549
            E I+ VEL+ +QKKYY+ IL +NF  L+ KG GQ    +L+N MM+L+KCCNHPYL   A
Sbjct: 1094 ETIIEVELTNIQKKYYRAILEKNFSFLS-KGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152

Query: 550  AEEAPVQ--------GGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
             E+   +           + +QA+ ++AGKLVL+ K+L K+K  GH+  I          
Sbjct: 1153 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI---------- 1202

Query: 602  INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                      F  M + LDILEDYL  +
Sbjct: 1203 ------------------------------------------FSQMVRCLDILEDYLIHK 1220

Query: 662  GYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWN 721
             Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT II+DSDWN
Sbjct: 1221 RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1280

Query: 722  PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
            P ND+QA +R HRIG QNK                                     V +Y
Sbjct: 1281 PQNDLQAQARCHRIG-QNK------------------------------------AVKVY 1303

Query: 782  RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN------FTKQELDDILRFGTEEL 835
            R VTRNS E  +   A  K+ L   V++  M G+ +N       +K+E++D+LR G    
Sbjct: 1304 RLVTRNSYEREMFDRASLKLGLDKAVLQ-SMSGRDSNVSGIQQLSKKEIEDLLRRGAYGA 1362

Query: 836  FKEEEEQ 842
              EEE++
Sbjct: 1363 IMEEEDE 1369


>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
          Length = 1468

 Score =  459 bits (1182), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/727 (37%), Positives = 395/727 (54%), Gaps = 148/727 (20%)

Query: 138 EWLIANRVINSK--TLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIE-FYNKK 192
           E+ +  R+I+S+  +L DG++   YLVKWR L YD+ATWE+  + +    E ++ F N++
Sbjct: 283 EFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVKLAPEQVKHFQNRE 342

Query: 193 KSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEK---QPPFLDDTGMQL 249
            SK                          P      T  R ++EK   QPPF+   G +L
Sbjct: 343 NSK------------------------ILPQYSSNYTSQRPRFEKLSVQPPFI--KGGEL 376

Query: 250 HAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLST 309
             +QL GINW+ + W +  + ILADEMGLGKT+QT+ F+  L       GP ++  PLST
Sbjct: 377 RDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLST 436

Query: 310 IINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVL 369
           +  W   FE WAPD   + Y+G++  R  +R+++  + +   +G K       T+KF+VL
Sbjct: 437 MPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEF-YTNPRAKGKK-------TMKFNVL 488

Query: 370 LTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNN 429
           LT+YE I  D A LGSI+W  + VDEAHRLK+ +S  ++ L+ + + N++L+TGTPLQNN
Sbjct: 489 LTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNN 548

Query: 430 LEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPS 489
           ++EL  L+NFL P +F        E  D  +EE +  LH  + P +LRRLK DV K++PS
Sbjct: 549 IKELAALVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPS 608

Query: 490 KSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAA 549
           K+E I+RVELS +Q +YYK ILT+N+ AL     G   SLLNIM +LKK  NHPYLF  A
Sbjct: 609 KTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNA 668

Query: 550 AEEAPVQGG------QYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVIN 603
            E    + G      +  ++ L  ++GK+VLL ++L +LK+DGHR  I            
Sbjct: 669 EERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLI------------ 716

Query: 604 SKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGY 663
                                                   F  M +MLDIL DYL  +G 
Sbjct: 717 ----------------------------------------FSQMVRMLDILGDYLSIKGI 736

Query: 664 KYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPH 723
            ++R+DG +  + R+ SID FN+P ++ FVFLLSTR+GGLGINL TADTV+I+DSDWNP 
Sbjct: 737 NFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQ 796

Query: 724 NDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRF 783
            D+QA +RAHRIGQ                                     +N VM+YR 
Sbjct: 797 ADLQAMARAHRIGQ-------------------------------------KNHVMVYRL 819

Query: 784 VTRNSVEERVTQVAKRKMMLTHLVVRPGM--GGKQANFTKQ------ELDDILRFGTEEL 835
           V++++VEE V + A++KM+L + ++  G+  G K   +TK+      EL  IL+FG   +
Sbjct: 820 VSKDTVEEEVLERARKKMILEYAIISLGVTDGNK---YTKKNEPNAGELSAILKFGAGNM 876

Query: 836 FKEEEEQ 842
           F   + Q
Sbjct: 877 FTATDNQ 883


>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
           PE=1 SV=4
          Length = 2715

 Score =  458 bits (1179), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 284/734 (38%), Positives = 387/734 (52%), Gaps = 163/734 (22%)

Query: 137 PEWLIANRVINSKTLRDGST-----IYLVKWRDLPYDKATWEDENEDIPGLK----ESIE 187
           P+++  +R++     +D  T      YLVKW  LPY+++TWE E ED+   K    ES++
Sbjct: 372 PDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELE-EDVDPAKVKEFESLQ 430

Query: 188 FYNKKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGM 247
              + K                               E+P +D  +K EK   + +    
Sbjct: 431 VLPEIKHV-----------------------------ERPASDSWQKLEKSREYKNSN-- 459

Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
           QL  YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFL  +F  G   GPFL+ APL
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPL 518

Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
           STI NWEREF TW  +   + Y G +  R +++ +++ + D     G P    S   KFH
Sbjct: 519 STITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQ---GNPL---SGVFKFH 571

Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQ 427
           V++T++E+I  D   L  I W+ +++DEAHRLK+   K  + L   ++++K+LLTGTPLQ
Sbjct: 572 VVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQ 631

Query: 428 NNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNM 487
           N++EELF LLNFL P +F   T+F  EF D+  EEQVK+L  +L P MLRRLK DV KN+
Sbjct: 632 NSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNL 691

Query: 488 PSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCNHPYL 545
             K E I+ VEL+ +QKKYY+ IL +NF  L  KG  Q    +L+N MM+L+KCCNHPYL
Sbjct: 692 APKQETIIEVELTNIQKKYYRAILEKNFSFLT-KGANQHNMPNLINTMMELRKCCNHPYL 750

Query: 546 FPAAAE------------EAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKP 593
              A E            +AP     +++QA+ +AAGKLVL+ K+L KL   GH+  I  
Sbjct: 751 INGAEEKILEDFRKTHSPDAP----DFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLI-- 804

Query: 594 EWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDI 653
                                                             F  M + LDI
Sbjct: 805 --------------------------------------------------FSQMVRCLDI 814

Query: 654 LEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTV 713
           LEDYL    Y YERIDG + G++RQ +IDRF  P + +FVFLL TR+GGLGINL  ADT 
Sbjct: 815 LEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTC 874

Query: 714 IIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 773
           II+DSDWNP ND+QA +R HRIGQ                             S+A    
Sbjct: 875 IIFDSDWNPQNDLQAQARCHRIGQ-----------------------------SKA---- 901

Query: 774 QQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV-----RPGMGGKQANFTKQELDDIL 828
               V +YR +TRNS E  +   A  K+ L   V+     + G  G Q   +K E++D+L
Sbjct: 902 ----VKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQ-QLSKMEVEDLL 956

Query: 829 RFGTEELFKEEEEQ 842
           R G      +EE++
Sbjct: 957 RKGAYGALMDEEDE 970


>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
           PE=1 SV=2
          Length = 1710

 Score =  451 bits (1159), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 275/716 (38%), Positives = 387/716 (54%), Gaps = 140/716 (19%)

Query: 138 EWLIANRVINSKTLRD--GSTIYLVKWRDLPYDKATWEDENEDIPGLKESI-EFYNKKKS 194
           ++ I  R+I     +   G   Y  KW+ LPY + +WED        +  I E++++ +S
Sbjct: 387 QYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYFSRNQS 446

Query: 195 KGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLD-DTGMQLHAYQ 253
           K       K L++        +PR                 +KQP ++    G++L  YQ
Sbjct: 447 KTTPFKDCKVLKQ--------RPRFVA-------------LKKQPSYIGGHEGLELRDYQ 485

Query: 254 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 313
           L G+NWL +SW +    ILADEMGLGKTIQTI+FL  LF E    GPFL+  PLST+ +W
Sbjct: 486 LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW 545

Query: 314 EREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSY 373
           +RE +TWA     V Y+GD + R ++R H+ +   T              +KF++LLT+Y
Sbjct: 546 QREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKR------------LKFNILLTTY 593

Query: 374 ELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEEL 433
           E++  D A LG + WA + VDEAHRLK++ S  +K L  +   ++LL+TGTPLQN+L+EL
Sbjct: 594 EILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKEL 653

Query: 434 FHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEF 493
           + LL+F+ PEKF+    F+ E     +E     LH  L P +LRR+K DV K++P+K E 
Sbjct: 654 WSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQ 712

Query: 494 IVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEA 553
           I+R+E+S +QK+YYK+ILTRN++AL+    G     LNIMM+LKKCCNH YL     +  
Sbjct: 713 ILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLI-KPPDNN 771

Query: 554 PVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTI 613
                Q  +Q L R++GKL+LL K+L +L+E G+R  I                      
Sbjct: 772 EFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLI---------------------- 809

Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNIT 673
                                         F  M +MLDIL +YL    + ++R+DG+I 
Sbjct: 810 ------------------------------FSQMVRMLDILAEYLKYRQFPFQRLDGSIK 839

Query: 674 GSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 733
           G +R++++D FNA G+  F FLLSTR+GGLGINLA+ADTV+I+DSDWNP ND+QA +RAH
Sbjct: 840 GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH 899

Query: 734 RIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
           RI                                     GQ+ +V IYR VT+ SVEE +
Sbjct: 900 RI-------------------------------------GQKKQVNIYRLVTKGSVEEDI 922

Query: 794 TQVAKRKMMLTHLVV-RPGMGGK-----------QANFTKQELDDILRFGTEELFK 837
            + AK+KM+L HLV+ R    GK              F K+EL  IL+FG EELFK
Sbjct: 923 LERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFK 978


>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
            GN=chd8 PE=2 SV=2
          Length = 2184

 Score =  450 bits (1158), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 278/727 (38%), Positives = 379/727 (52%), Gaps = 146/727 (20%)

Query: 137  PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNK 191
            P+++  +R+++     D   G  +  YLVKW  LPY+ +TWE        LKE ++    
Sbjct: 665  PDYVEVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWE--------LKEDVD---- 712

Query: 192  KKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
                     K +E +  E  A     +R   P       L    E Q       G QL  
Sbjct: 713  -------DGKIEEFKRIE--ARQPNLKRVARPAATSWKKLELSREYQ------NGNQLRE 757

Query: 252  YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
            YQLEG+NWL ++W    + ILADEMGLGKTIQ+ITFL  ++  G  +GPFLV APLSTI 
Sbjct: 758  YQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVG-IRGPFLVIAPLSTIT 816

Query: 312  NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLT 371
            NWEREF +W      + Y G    R +++ +++  +D+  R      +     KF  L+T
Sbjct: 817  NWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGR------LIPGAYKFDALIT 869

Query: 372  SYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLE 431
            ++E++ +D   L  IEW  +++DEAHRLK+   K    L    +++K+LLTGTPLQN +E
Sbjct: 870  TFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 929

Query: 432  ELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKS 491
            ELF LL+FL P +F+    F  +F D+  EEQV++L  +L P MLRRLK DV KN+  K 
Sbjct: 930  ELFSLLHFLEPTQFSSEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQ 989

Query: 492  EFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVS--LLNIMMDLKKCCNHPYLFPAA 549
            E I+ VEL+ +QKKYY+ IL +NF  L  KG  Q  +  LLN MM+L+KCCNHPYL   A
Sbjct: 990  ETIIEVELTNIQKKYYRAILEKNFSFLT-KGASQSNTPNLLNTMMELRKCCNHPYLITGA 1048

Query: 550  AEE--------APVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
             E+         PV    + +QA+ R++GKLVL+ K+L KL+  GH+  I          
Sbjct: 1049 EEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLI---------- 1098

Query: 602  INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                      F  M + LDILEDYL   
Sbjct: 1099 ------------------------------------------FSQMVRCLDILEDYLIQR 1116

Query: 662  GYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWN 721
             Y YERIDG + G+MRQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT II+DSDWN
Sbjct: 1117 RYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1176

Query: 722  PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
            P ND+QA +R HRIGQ                             S+A        V IY
Sbjct: 1177 PQNDLQAQARCHRIGQ-----------------------------SKA--------VKIY 1199

Query: 782  RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMG------GKQANFTKQELDDILRFGTEEL 835
            R +TRNS E  +   A  K+ L   V++   G      G    FTK+E++D+LR G    
Sbjct: 1200 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAYAA 1259

Query: 836  FKEEEEQ 842
              +E+++
Sbjct: 1260 IMDEDDE 1266



 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 36/123 (29%)

Query: 575 LSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWE 629
           +++M   L+ED   +   P+++  +R+++     D   G  +  YLVKW  LPY+ +TWE
Sbjct: 649 MTQMQHFLQEDEESFN--PDYVEVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWE 706

Query: 630 DENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGA 689
                   LKE ++               DG+  +++RI+       RQ ++ R   P A
Sbjct: 707 --------LKEDVD---------------DGKIEEFKRIEA------RQPNLKRVARPAA 737

Query: 690 SQF 692
           + +
Sbjct: 738 TSW 740


>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
           PE=1 SV=3
          Length = 1711

 Score =  450 bits (1157), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/716 (38%), Positives = 389/716 (54%), Gaps = 140/716 (19%)

Query: 138 EWLIANRVINSKTLRDGSTI--YLVKWRDLPYDKATWEDENEDIPGLKESI-EFYNKKKS 194
           ++ I  R+I     +  + +  Y  KW+ LPY + +WED        +  I E++++ +S
Sbjct: 385 QYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEYFSRNQS 444

Query: 195 KGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLD-DTGMQLHAYQ 253
           K       K L++        +PR                 +KQP ++    G++L  YQ
Sbjct: 445 KTTPFKDCKVLKQ--------RPRFVA-------------LKKQPSYIGGHEGLELRDYQ 483

Query: 254 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 313
           L G+NWL +SW +    ILADEMGLGKTIQTI+FL  LF E    GPFL+  PLST+ +W
Sbjct: 484 LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW 543

Query: 314 EREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSY 373
           +RE +TWA     V Y+GD + R ++R H+  W             ++  +KF++LLT+Y
Sbjct: 544 QREIQTWASQMNAVVYLGDINSRNMIRTHE--W----------MHPQTKRLKFNILLTTY 591

Query: 374 ELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEEL 433
           E++  D A LG + WA + VDEAHRLK++ S  +K L  +   ++LL+TGTPLQN+L+EL
Sbjct: 592 EILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKEL 651

Query: 434 FHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEF 493
           + LL+F+ PEKF+    F+ E     +E     LH  L P +LRR+K DV K++P+K E 
Sbjct: 652 WSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQ 710

Query: 494 IVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEA 553
           I+R+E+S +QK+YYK+ILTRN++AL+    G     LNIMM+LKKCCNH YL     +  
Sbjct: 711 ILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLI-KPPDNN 769

Query: 554 PVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTI 613
                Q  +Q L R++GKL+LL K+L +L+E G+R  I                      
Sbjct: 770 EFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLI---------------------- 807

Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNIT 673
                                         F  M +MLDIL +YL    + ++R+DG+I 
Sbjct: 808 ------------------------------FSQMVRMLDILAEYLKYRQFPFQRLDGSIK 837

Query: 674 GSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 733
           G +R++++D FNA G+  F FLLSTR+GGLGINLA+ADTV+I+DSDWNP ND+QA +RAH
Sbjct: 838 GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH 897

Query: 734 RIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
           RI                                     GQ+ +V IYR VT+ SVEE +
Sbjct: 898 RI-------------------------------------GQKKQVNIYRLVTKGSVEEDI 920

Query: 794 TQVAKRKMMLTHLVV-RPGMGGK-----------QANFTKQELDDILRFGTEELFK 837
            + AK+KM+L HLV+ R    GK              F K+EL  IL+FG EELFK
Sbjct: 921 LERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFK 976


>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
            PE=1 SV=1
          Length = 2582

 Score =  449 bits (1156), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 286/759 (37%), Positives = 400/759 (52%), Gaps = 150/759 (19%)

Query: 108  EEDKRM-ARLNRHNINDEELEKKYYR--YGIKPEWLIANRVINSKTLRD---GSTI--YL 159
            E+DKR+  +L R      ++   ++       P+++  +R+++     D   G  +  YL
Sbjct: 691  EKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVIYYL 750

Query: 160  VKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGSKPRR 219
            VKW  LPY+ +TWE        LKE ++   K +   R +++  EL            RR
Sbjct: 751  VKWCSLPYEDSTWE--------LKEDVD-EGKIREFKRIQSRHPEL------------RR 789

Query: 220  YTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLG 279
                  +P  +  KK E    + +    QL  YQLEG+NWL ++W    + ILADEMGLG
Sbjct: 790  VN----RPQANAWKKLELSHEYKNRN--QLREYQLEGVNWLLFNWYNRQNCILADEMGLG 843

Query: 280  KTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 339
            KTIQ+I FL  ++  G   GPFLV APLSTI NWEREF TW  +   + Y G    R ++
Sbjct: 844  KTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMI 901

Query: 340  RDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRL 399
            + +++  +D+  RG    R+     KF  L+T++E+I +D   L  IEW  +++DEAHRL
Sbjct: 902  QQYEMYCKDS--RG----RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRL 955

Query: 400  KSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADIS 459
            K+   K    L    +++K+LLTGTPLQN +EELF LL+FL P +F   + F  +F D+ 
Sbjct: 956  KNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLK 1015

Query: 460  KEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALN 519
             EEQV++L  +L P MLRRLK DV KN+  K E I+ VEL+ +QKKYY+ IL +NF  L+
Sbjct: 1016 TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS 1075

Query: 520  PKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEE--------APVQGGQYEIQALTRAA 569
             KG G     +LLN MM+L+KCCNHPYL   A E+          +    + +QA+ R+A
Sbjct: 1076 -KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSA 1134

Query: 570  GKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 629
            GKLVL+ K+L KLK  GH+  I                                      
Sbjct: 1135 GKLVLIDKLLPKLKAGGHKVLI-------------------------------------- 1156

Query: 630  DENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGA 689
                          F  M + LDILEDYL    Y YERIDG + G++RQ +IDRF+ P +
Sbjct: 1157 --------------FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS 1202

Query: 690  SQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADT 749
             +FVFLL TR+GGLGINL  ADT II+DSDWNP ND+QA +R HRIGQ            
Sbjct: 1203 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ------------ 1250

Query: 750  VIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR 809
                             S+A        V +YR +TRNS E  +   A  K+ L   V++
Sbjct: 1251 -----------------SKA--------VKVYRLITRNSYEREMFDKASLKLGLDKAVLQ 1285

Query: 810  PGMGGKQAN------FTKQELDDILRFGTEELFKEEEEQ 842
              M G+  N      F+K+E++D+LR G      EE+++
Sbjct: 1286 -SMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE 1323


>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
            GN=Chd8 PE=1 SV=2
          Length = 2581

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 284/759 (37%), Positives = 399/759 (52%), Gaps = 150/759 (19%)

Query: 108  EEDKRM-ARLNRHNINDEELEKKYYR--YGIKPEWLIANRVINSKTLRD---GSTI--YL 159
            E+DKR+  +L R      ++   ++       P+++  +R+++     D   G  +  YL
Sbjct: 689  EKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVIYYL 748

Query: 160  VKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGSKPRR 219
            VKW  LPY+ +TWE        LKE ++   K +   R +++  EL+             
Sbjct: 749  VKWCSLPYEDSTWE--------LKEDVD-EGKIREFKRIQSRHPELKRVN---------- 789

Query: 220  YTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLG 279
                  +P  +  KK E    + +    QL  YQLEG+NWL ++W    + ILADEMGLG
Sbjct: 790  ------RPQANAWKKLELSHEYKNRN--QLREYQLEGVNWLLFNWYNRQNCILADEMGLG 841

Query: 280  KTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 339
            KTIQ+I FL  ++  G   GPFLV APLSTI NWEREF TW  +   + Y G    R ++
Sbjct: 842  KTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMI 899

Query: 340  RDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRL 399
            + +++  +D+  RG    R+     KF  L+T++E+I +D   L  IEW  +++DEAHRL
Sbjct: 900  QQYEMYCKDS--RG----RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRL 953

Query: 400  KSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADIS 459
            K+   K    L    +++K+LLTGTPLQN +EELF LL+FL P +F   + F  +F D+ 
Sbjct: 954  KNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLK 1013

Query: 460  KEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALN 519
             EEQV++L  +L P MLRRLK DV KN+  K E I+ VEL+ +QKKYY+ IL +NF  L+
Sbjct: 1014 TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS 1073

Query: 520  PKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEE--------APVQGGQYEIQALTRAA 569
             KG G     +LLN MM+L+KCCNHPYL   A E+          +    + +QA+ R+A
Sbjct: 1074 -KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSA 1132

Query: 570  GKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 629
            GKLVL+ K+L KLK  GH+  I                                      
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLI-------------------------------------- 1154

Query: 630  DENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGA 689
                          F  M + LDILEDYL    Y YERIDG + G++RQ +IDRF+ P +
Sbjct: 1155 --------------FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS 1200

Query: 690  SQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADT 749
             +FVFLL TR+GGLGINL  ADT II+DSDWNP ND+QA +R HRIGQ            
Sbjct: 1201 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ------------ 1248

Query: 750  VIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR 809
                             S+A        V +YR +TRNS E  +   A  K+ L   V++
Sbjct: 1249 -----------------SKA--------VKVYRLITRNSYEREMFDKASLKLGLDKAVLQ 1283

Query: 810  PGMGGKQAN------FTKQELDDILRFGTEELFKEEEEQ 842
              M G+  N      F+K+E++D+LR G      EE+++
Sbjct: 1284 -SMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE 1321


>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
           GN=CHD1 PE=1 SV=1
          Length = 1719

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/716 (38%), Positives = 388/716 (54%), Gaps = 140/716 (19%)

Query: 138 EWLIANRVINSKTLRD--GSTIYLVKWRDLPYDKATWEDENEDIPGLKESI-EFYNKKKS 194
           ++ I  R+I     +   G   Y  KW+ LPY + +WED        +  I E++++ +S
Sbjct: 383 QYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEYFSRNQS 442

Query: 195 KGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLD-DTGMQLHAYQ 253
           K       K L++        +PR                 +KQP ++     ++L  YQ
Sbjct: 443 KTTPFKDCKVLKQ--------RPRFVA-------------LKKQPSYIGGHESLELRDYQ 481

Query: 254 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 313
           L G+NWL +SW +    ILADEMGLGKTIQTI+FL  LF E    GPFL+  PLST+ +W
Sbjct: 482 LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW 541

Query: 314 EREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSY 373
           +RE +TWAP    V Y+GD   R ++R H+  W             ++  +KF++LLT+Y
Sbjct: 542 QREIQTWAPQMNAVVYLGDITSRNMIRTHE--W----------MHPQTKRLKFNILLTTY 589

Query: 374 ELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEEL 433
           E++  D + LG + WA + VDEAHRLK++ S  +K L  +   ++LL+TGTPLQN+L+EL
Sbjct: 590 EILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKEL 649

Query: 434 FHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEF 493
           + LL+F+ PEKF+    F+ E     +E     LH  L P +LRR+K DV K++P+K E 
Sbjct: 650 WSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQ 708

Query: 494 IVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEA 553
           I+R+E+S +QK+YYK+ILTRN++AL+    G     LNIMM+LKKCCNH YL     ++ 
Sbjct: 709 ILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLI-KPPDDN 767

Query: 554 PVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTI 613
                Q  +Q L R++GKL+LL K+L +L+E G+R  I                      
Sbjct: 768 EFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLI---------------------- 805

Query: 614 YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNIT 673
                                         F  M +MLDIL +YL    + ++R+DG+I 
Sbjct: 806 ------------------------------FSQMVRMLDILAEYLKYRQFPFQRLDGSIK 835

Query: 674 GSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 733
           G +R++++D FNA G+  F FLLSTR+GGLGINLA+ADTV+I+DSDWNP ND+QA +RAH
Sbjct: 836 GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH 895

Query: 734 RIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERV 793
           RI                                     GQ+ +V IYR VT+ SVEE +
Sbjct: 896 RI-------------------------------------GQKKQVNIYRLVTKGSVEEDI 918

Query: 794 TQVAKRKMMLTHLVV-RPGMGGK-----------QANFTKQELDDILRFGTEELFK 837
            + AK+KM+L HLV+ R    GK              F K+EL  IL+FG EELFK
Sbjct: 919 LERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFK 974


>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
            PE=3 SV=2
          Length = 2511

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/726 (38%), Positives = 383/726 (52%), Gaps = 146/726 (20%)

Query: 137  PEWLIANRVINSKTLRD---GSTI--YLVKWRDLPYDKATWEDENEDIPGLKESIEFYNK 191
            P+++  +R+++     D   G  +  YLVKW  LPY+ ATWE        LKE ++    
Sbjct: 757  PDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWE--------LKEDVD---- 804

Query: 192  KKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHA 251
                   + K +E ++ E      +PR    P  +P     KK ++   +    G QL  
Sbjct: 805  -------EGKVEEFRKIE----SRQPRLKRTP--RPAASAWKKLDESTEY--KNGNQLRE 849

Query: 252  YQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTII 311
            YQLEG+NWL ++W    + ILADEMGLGKTIQ+I  L  +F  G  + PF++ APLSTI 
Sbjct: 850  YQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAG-VQSPFMIIAPLSTIT 908

Query: 312  NWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLT 371
            NWEREF  W  D   + Y G    R +++ +++  +D  ++G     +     KF  L+T
Sbjct: 909  NWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKD--DKG----HLIPGAYKFDALIT 961

Query: 372  SYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLE 431
            ++E+I +D   L  I W  +V+DEAHRLK+   K    L    I++K+LLTGTPLQN +E
Sbjct: 962  TFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVE 1021

Query: 432  ELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKS 491
            ELF LL+FL P +F     F  EF D+  EEQV++L  +L P MLRRLK DV KN+  K 
Sbjct: 1022 ELFSLLHFLEPAQFPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQ 1081

Query: 492  EFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVS----LLNIMMDLKKCCNHPYLFP 547
            E I+ VEL+ +QKKYY+ IL RNF  L+   G  Q S    LLN MM+L+KCCNHPYL  
Sbjct: 1082 ETIIEVELTDVQKKYYRAILERNFSFLS--MGATQNSNVPNLLNTMMELRKCCNHPYLIT 1139

Query: 548  AAAEEAPVQ--------GGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIAN 599
             A E+   +           + +QAL R+AGKLVLL K+L +LK  GH+  I        
Sbjct: 1140 GAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLI-------- 1191

Query: 600  RVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLD 659
                                                        F  M + LDILEDYL 
Sbjct: 1192 --------------------------------------------FSQMVRCLDILEDYLI 1207

Query: 660  GEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSD 719
             + Y YERIDG + G++RQ +IDRF+ P + +FVFLL TR+GGLGINL  ADT +I+DSD
Sbjct: 1208 HKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSD 1267

Query: 720  WNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVM 779
            WNP ND+QA +R HRIGQ                             S+A        V 
Sbjct: 1268 WNPQNDLQAQARCHRIGQ-----------------------------SKA--------VK 1290

Query: 780  IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQAN---FTKQELDDILRFGTEELF 836
            +YR +TRNS E  +   A  K+ L   V++   G K+++   F+K+E++D+LR G     
Sbjct: 1291 VYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKKEIEDLLRKGAYAAI 1350

Query: 837  KEEEEQ 842
             +E ++
Sbjct: 1351 MDENDE 1356


>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
            PE=1 SV=5
          Length = 2581

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 284/759 (37%), Positives = 398/759 (52%), Gaps = 150/759 (19%)

Query: 108  EEDKRM-ARLNRHNINDEELEKKYYR--YGIKPEWLIANRVINSKTLRD---GSTI--YL 159
            E+DKR+  +L R      ++   ++       P+++  +R+++     D   G  +  YL
Sbjct: 689  EKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNGEPVIYYL 748

Query: 160  VKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGSKPRR 219
            VKW  LPY+ +TWE        LKE ++   K +   R +++  EL+             
Sbjct: 749  VKWCSLPYEDSTWE--------LKEDVD-EGKIREFKRIQSRHPELKRVN---------- 789

Query: 220  YTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLG 279
                  +P     KK E    + +    QL  YQLEG+NWL ++W    + ILADEMGLG
Sbjct: 790  ------RPQASAWKKLELSHEYKNRN--QLREYQLEGVNWLLFNWYNRQNCILADEMGLG 841

Query: 280  KTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 339
            KTIQ+I FL  ++  G   GPFLV APLSTI NWEREF TW  +   + Y G    R ++
Sbjct: 842  KTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMI 899

Query: 340  RDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRL 399
            + +++  +D+  RG    R+     KF  L+T++E+I +D   L  IEW  +++DEAHRL
Sbjct: 900  QQYEMYCKDS--RG----RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRL 953

Query: 400  KSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADIS 459
            K+   K    L    +++K+LLTGTPLQN +EELF LL+FL P +F   + F  +F D+ 
Sbjct: 954  KNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLK 1013

Query: 460  KEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALN 519
             EEQV++L  +L P MLRRLK DV KN+  K E I+ VEL+ +QKKYY+ IL +NF  L+
Sbjct: 1014 TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS 1073

Query: 520  PKGGGQ--QVSLLNIMMDLKKCCNHPYLFPAAAEE--------APVQGGQYEIQALTRAA 569
             KG G     +LLN MM+L+KCCNHPYL   A E+          +    + +QA+ R+A
Sbjct: 1074 -KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSA 1132

Query: 570  GKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWE 629
            GKLVL+ K+L KLK  GH+  I                                      
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLI-------------------------------------- 1154

Query: 630  DENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGA 689
                          F  M + LDILEDYL    Y YERIDG + G++RQ +IDRF+ P +
Sbjct: 1155 --------------FSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS 1200

Query: 690  SQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADT 749
             +FVFLL TR+GGLGINL  ADT II+DSDWNP ND+QA +R HRIGQ            
Sbjct: 1201 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ------------ 1248

Query: 750  VIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR 809
                             S+A        V +YR +TRNS E  +   A  K+ L   V++
Sbjct: 1249 -----------------SKA--------VKVYRLITRNSYEREMFDKASLKLGLDKAVLQ 1283

Query: 810  PGMGGKQAN------FTKQELDDILRFGTEELFKEEEEQ 842
              M G+  N      F+K+E++D+LR G      EE+++
Sbjct: 1284 -SMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE 1321


>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
           GN=Smarca1 PE=1 SV=1
          Length = 1046

 Score =  393 bits (1009), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/630 (35%), Positives = 334/630 (53%), Gaps = 119/630 (18%)

Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
           + T+++  ++E  P ++   G  L  YQ+ G+NWL   +   ++ ILADEMGLGKT+QTI
Sbjct: 166 RKTSNVCVRFEVSPSYV--KGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 223

Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
             L  L    +  GP +V  P ST+ NW  EF+ W P   V+ +VGDKD R   +RD  +
Sbjct: 224 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMM 283

Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
             E                  + V +TSYE++  + ++     W  LV+DEAHR+K+ +S
Sbjct: 284 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 325

Query: 405 KFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFAD---ISKE 461
           K  + +  +   N+LLLTGTPLQNNL EL+ LLNFL P+ FN    F + F     +  +
Sbjct: 326 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 385

Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
           + V+RLH +L P +LRR+K DV K++P K E  + + LS MQ+++Y  IL ++ + LN  
Sbjct: 386 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSS 445

Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKK 581
           G   ++ LLNI+M L+KCCNHPYLF  A    P    ++    +   +GK+V L K+L +
Sbjct: 446 GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH----IVGNSGKMVALDKLLAR 501

Query: 582 LKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKES 641
           +KE G R  I                                                  
Sbjct: 502 IKEQGSRVLI-------------------------------------------------- 511

Query: 642 IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSG 701
             F  MT++LDILEDY    GY+Y R+DG      R+E+ID FNAP +S+F+F+LSTR+G
Sbjct: 512 --FSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAG 569

Query: 702 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHN 761
           GLGINLA+AD VI+YDSDWNP  D+QA  RAHRIG                         
Sbjct: 570 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG------------------------- 604

Query: 762 DIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG-MGGKQAN-F 819
                       Q+  V ++R +T N+VEER+ + A+ K+ L  +V++ G +  +Q+N  
Sbjct: 605 ------------QKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 652

Query: 820 TKQELDDILRFGTEELFKEEEEQPENTEII 849
            K+E+  ++R G   +F  +E +  + +I+
Sbjct: 653 AKEEMLQMIRHGATHVFACKESELTDEDIV 682


>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
           SV=1
          Length = 1120

 Score =  385 bits (990), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/600 (37%), Positives = 324/600 (54%), Gaps = 118/600 (19%)

Query: 248 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 307
           +L  YQ++G+NWL       +  ILADEMGLGKT+QTI+FL  L      +GPFL+  P 
Sbjct: 183 KLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPK 242

Query: 308 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFH 367
           ST+ NW REF  W P+  V+   GDKD R      DI             R      +F 
Sbjct: 243 STLDNWRREFLKWTPNVNVLVLHGDKDTRA-----DI------------VRNIILEARFD 285

Query: 368 VLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQ 427
           VL+TSYE++  +   L  + W  +V+DEAHR+K+ QS   + +  +  +N+LL+TGTPLQ
Sbjct: 286 VLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQ 345

Query: 428 NNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQ----VKRLHDLLGPHMLRRLKADV 483
           NNL EL+ LLNFL P+ F D   F   F   + E+     +++LH +L P +LRR+KADV
Sbjct: 346 NNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADV 405

Query: 484 LKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQ--VSLLNIMMDLKKCCN 541
            K++  K E  V V ++ MQ ++YK +L ++ +A+N   G ++    LLNI+M L+KCCN
Sbjct: 406 EKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCN 465

Query: 542 HPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
           HPYLF  A    P    ++    L   +GK+++L K+LK+LKE G R  I          
Sbjct: 466 HPYLFEGAEPGPPYTTDEH----LIFNSGKMIILDKLLKRLKEKGSRVLI---------- 511

Query: 602 INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                     F  M+++LDILEDY    
Sbjct: 512 ------------------------------------------FSQMSRLLDILEDYCYFR 529

Query: 662 GYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWN 721
            ++Y RIDG+ +   R E+ID +N P + +FVFLL+TR+GGLGINL TADTVI++DSDWN
Sbjct: 530 DFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWN 589

Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
           P  D+QA  RAHRI                                     GQ+ +V +Y
Sbjct: 590 PQADLQAMDRAHRI-------------------------------------GQKKQVHVY 612

Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANF--TKQELDDILRFGTEELFKEE 839
           RFVT N++EE+V + A +K+ L  LV++ G G K A+   +K +L D+++FG + +F+++
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMFEKK 672


>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
           GN=SMARCA1 PE=1 SV=2
          Length = 1054

 Score =  383 bits (984), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/641 (35%), Positives = 334/641 (52%), Gaps = 131/641 (20%)

Query: 226 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 285
           + T+++  ++E  P ++   G  L  YQ+ G+NWL   +   ++ ILADEMGLGKT+QTI
Sbjct: 162 RKTSNVCIRFEVSPSYV--KGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 219

Query: 286 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDI 344
             L  L    +  GP +V  P ST+ NW  EF+ W P   V+ +VGDKD R   +RD  +
Sbjct: 220 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMM 279

Query: 345 SWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQS 404
             E                  + V +TSYE++  + ++     W  LV+DEAHR+K+ +S
Sbjct: 280 PGE------------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKS 321

Query: 405 KFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFAD---ISKE 461
           K  + +  +   N+LLLTGTPLQNNL EL+ LLNFL P+ FN    F + F     +  +
Sbjct: 322 KLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ 381

Query: 462 EQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPK 521
           + V+RLH +L P +LRR+K DV K++P K E  + + LS MQ+++Y  IL ++ + LN  
Sbjct: 382 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSS 441

Query: 522 GGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKK 581
           G   ++ LLNI+M L+KCCNHPYLF  A    P    ++    +   +GK+V+L K+L K
Sbjct: 442 GKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEH----IVSNSGKMVVLDKLLAK 497

Query: 582 LKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKES 641
           LKE G R  I                                                  
Sbjct: 498 LKEQGSRVLI-------------------------------------------------- 507

Query: 642 IEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQ------------ESIDRFNAPGA 689
             F  MT++LDILEDY    GY+Y R+DG      R+            E+I+ FNAP +
Sbjct: 508 --FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNS 565

Query: 690 SQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADT 749
           S+F+F+LSTR+GGLGINLA+AD VI+YDSDWNP  D+QA  RAHRIG             
Sbjct: 566 SKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG------------- 612

Query: 750 VIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVR 809
                                   Q+  V ++R +T N+VEER+ + A+ K+ L  +V++
Sbjct: 613 ------------------------QKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 648

Query: 810 PG-MGGKQAN-FTKQELDDILRFGTEELFKEEEEQPENTEI 848
            G +  +Q+N   K+E+  ++R G   +F  +E +  + +I
Sbjct: 649 QGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDI 689


>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
           chromatin subfamily A member 5 OS=Homo sapiens
           GN=SMARCA5 PE=1 SV=1
          Length = 1052

 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/627 (36%), Positives = 324/627 (51%), Gaps = 119/627 (18%)

Query: 228 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 287
            T++  ++E  P ++     +L  YQ+ G+NWL   +   I+ ILADEMGLGKT+QTI+ 
Sbjct: 161 ATNVCTRFEDSPSYV--KWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 218

Query: 288 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISW 346
           L  +    +  GP +V  P ST+ NW  EF+ W P    V  +GDK+ R   +RD  +  
Sbjct: 219 LGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPG 278

Query: 347 EDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKF 406
           E                  + V +TSYE++  + ++     W  LV+DEAHR+K+ +SK 
Sbjct: 279 E------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 320

Query: 407 FKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFAD---ISKEEQ 463
            + +  +   N+LLLTGTPLQNNL EL+ LLNFL P+ FN    F + F     +  ++ 
Sbjct: 321 SEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKL 380

Query: 464 VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG 523
           V+RLH +L P +LRR+KADV K++P K E  + V LS MQ+++Y  IL ++ + LN  G 
Sbjct: 381 VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGK 440

Query: 524 GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLK 583
             ++ LLNI+M L+KCCNHPYLF  A    P     +    L   +GK+V+L K+L KLK
Sbjct: 441 MDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH----LVTNSGKMVVLDKLLPKLK 496

Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
           E G R  I                                                    
Sbjct: 497 EQGSRVLI---------------------------------------------------- 504

Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
           F  MT++LDILEDY     Y+Y R+DG      RQ+SI+ +N P +++FVF+LSTR+GGL
Sbjct: 505 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGL 564

Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
           GINLATAD VI+YDSDWNP  D+QA  RAHR                             
Sbjct: 565 GINLATADVVILYDSDWNPQVDLQAMDRAHR----------------------------- 595

Query: 764 QAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQ--ANFTK 821
                   IGQ   V ++RF+T N+VEER+ + A+ K+ L  +V++ G    Q      K
Sbjct: 596 --------IGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK 647

Query: 822 QELDDILRFGTEELFKEEEEQPENTEI 848
            E+  ++R G   +F  +E +  + +I
Sbjct: 648 DEMLQMIRHGATHVFASKESEITDEDI 674


>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
           chromatin subfamily A member 5 OS=Mus musculus
           GN=Smarca5 PE=1 SV=1
          Length = 1051

 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/627 (36%), Positives = 324/627 (51%), Gaps = 119/627 (18%)

Query: 228 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 287
            T++  ++E  P ++     +L  YQ+ G+NWL   +   I+ ILADEMGLGKT+QTI+ 
Sbjct: 160 ATNVCTRFEDSPSYV--KWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 217

Query: 288 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRDHDISW 346
           L  +    +  GP +V  P ST+ NW  EF+ W P    V  +GDK+ R   +RD  +  
Sbjct: 218 LGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPG 277

Query: 347 EDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKF 406
           E                  + V +TSYE++  + ++     W  LV+DEAHR+K+ +SK 
Sbjct: 278 E------------------WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 319

Query: 407 FKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFAD---ISKEEQ 463
            + +  +   N+LLLTGTPLQNNL EL+ LLNFL P+ FN    F + F     +  ++ 
Sbjct: 320 SEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKL 379

Query: 464 VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGG 523
           V+RLH +L P +LRR+KADV K++P K E  + V LS MQ+++Y  IL ++ + LN  G 
Sbjct: 380 VERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGK 439

Query: 524 GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLK 583
             ++ LLNI+M L+KCCNHPYLF  A    P     +    L   +GK+V+L K+L KLK
Sbjct: 440 MDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH----LVTNSGKMVVLDKLLPKLK 495

Query: 584 EDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIE 643
           E G R  I                                                    
Sbjct: 496 EQGSRVLI---------------------------------------------------- 503

Query: 644 FYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGL 703
           F  MT++LDILEDY     Y+Y R+DG      RQ+SI+ +N P +++FVF+LSTR+GGL
Sbjct: 504 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGL 563

Query: 704 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDI 763
           GINLATAD VI+YDSDWNP  D+QA  RAHR                             
Sbjct: 564 GINLATADVVILYDSDWNPQVDLQAMDRAHR----------------------------- 594

Query: 764 QAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQ--ANFTK 821
                   IGQ   V ++RF+T N+VEER+ + A+ K+ L  +V++ G    Q      K
Sbjct: 595 --------IGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK 646

Query: 822 QELDDILRFGTEELFKEEEEQPENTEI 848
            E+  ++R G   +F  +E +  + +I
Sbjct: 647 DEMLQMIRHGATHVFASKESEITDEDI 673


>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
           GN=CHD1L PE=1 SV=2
          Length = 897

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/625 (37%), Positives = 324/625 (51%), Gaps = 122/625 (19%)

Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
           TG+ L +YQLEG+NWL   +      IL DEMGLGKT QTI     L    + +GPFL+ 
Sbjct: 42  TGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 101

Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
            PLS + NW+ E + +AP    VTY GDK+ R  L+  D+  E                 
Sbjct: 102 CPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQ-QDLKQES---------------- 144

Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
           +FHVLLT+YE+   D + L S  W+VLVVDEAHRLK+  S   K LS +S+   LLLTGT
Sbjct: 145 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 204

Query: 425 PLQNNLEELFHLLNFLTPEKFN--DLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKA 481
           P+QN+L+EL+ LL+F+ P+ F+  ++  F   + DI KE E    LH LL P +LRR+KA
Sbjct: 205 PIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKA 264

Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
           +V   +P K+E ++   +S +QKKYYK IL ++ +A   +   ++V L NI+  L+KC +
Sbjct: 265 EVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENE-TAKKVKLQNILSQLRKCVD 323

Query: 542 HPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
           HPYLF    E  P + G +    LT A+GKL LL K+L  L   GHR             
Sbjct: 324 HPYLFD-GVEPEPFEVGDH----LTEASGKLHLLDKLLAFLYSGGHRV------------ 366

Query: 602 INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                   + F  MT+MLDIL+DY+D  
Sbjct: 367 ----------------------------------------LLFSQMTQMLDILQDYMDYR 386

Query: 662 GYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWN 721
           GY YER+DG++ G  R  +I  F       FVFLLSTR+GG+G+NL  ADTVI  DSD+N
Sbjct: 387 GYSYERVDGSVRGEERHLAIKNFGQQPI--FVFLLSTRAGGVGMNLTAADTVIFVDSDFN 444

Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
           P ND+QA +RAHRIG QNK                                     V + 
Sbjct: 445 PQNDLQAAARAHRIG-QNK------------------------------------SVKVI 467

Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPG---MGG-KQANFTKQELDDILRFGTEELFK 837
           R + R++VEE V + A  K+ LT++++  G   +G  K A     +L +IL+FG ++L  
Sbjct: 468 RLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLA 527

Query: 838 EEEEQPENTEIIKQEAENQDPAYWV 862
            E    +  ++     E +D   WV
Sbjct: 528 SEGSTMDEIDLESILGETKD-GQWV 551


>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
           GN=CHD1L PE=2 SV=1
          Length = 897

 Score =  370 bits (949), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/625 (37%), Positives = 320/625 (51%), Gaps = 122/625 (19%)

Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
           TG+ L  YQL+G+NWL   +      IL DEMGLGKT QTI     L    + +GPFL+ 
Sbjct: 44  TGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103

Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
            PLS + NW+ E E +AP    VTY GDKD R  L+  D+  E                 
Sbjct: 104 CPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQ-QDLKQES---------------- 146

Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
           +FHVLLT+YE+   D + L S  W+VLVVDEAHRLK+  S   K LS +S+   LLLTGT
Sbjct: 147 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 206

Query: 425 PLQNNLEELFHLLNFLTPEKFN--DLTSFQAEFADISKE-EQVKRLHDLLGPHMLRRLKA 481
           P+QN+L+EL+ LL+F+ P+ F+   +  F   + DI KE E    L+ LL P +LRR+KA
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKA 266

Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
           +V   +P K+E ++   +S +QKKYYK IL ++ +A   +   ++V L N++  L+KC +
Sbjct: 267 EVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENE-TAKKVKLQNVLSQLRKCVD 325

Query: 542 HPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
           HPYLF    E  P + G +    L  A+GKL LL K+L  L   GHR             
Sbjct: 326 HPYLFD-GVEPEPFEIGDH----LIEASGKLHLLDKLLAFLYSKGHRV------------ 368

Query: 602 INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                   + F  MT+MLDIL+DYLD  
Sbjct: 369 ----------------------------------------LLFSQMTQMLDILQDYLDYR 388

Query: 662 GYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWN 721
           GY YER+DG++ G  R  +I  F       F FLLSTR+GG+G+NL  ADTVI +DSD+N
Sbjct: 389 GYSYERVDGSVRGEERHLAIKNFGQQPI--FTFLLSTRAGGVGMNLTAADTVIFFDSDFN 446

Query: 722 PHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIY 781
           P ND+QA +RAHRIG QNK                                     V + 
Sbjct: 447 PQNDLQAAARAHRIG-QNK------------------------------------SVKVI 469

Query: 782 RFVTRNSVEERVTQVAKRKMMLTHLVVRPG---MGG-KQANFTKQELDDILRFGTEELFK 837
           R + R++VEE V + A  K+ LT+ ++  G   +G  K A     +L +IL+FG ++L  
Sbjct: 470 RLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLS 529

Query: 838 EEEEQPENTEIIKQEAENQDPAYWV 862
            E       ++     E +D  +WV
Sbjct: 530 SEGSTMHEIDLKSILGETED-GHWV 553


>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
           GN=Chd1l PE=2 SV=1
          Length = 900

 Score =  363 bits (933), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 234/621 (37%), Positives = 315/621 (50%), Gaps = 123/621 (19%)

Query: 245 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
           TG++L +YQLEG+NWL   +      IL DEMGLGKT QTI  L  L    + +GPFLV 
Sbjct: 36  TGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVL 95

Query: 305 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
            PLS + NW+ E E +AP    VTY GDK+ R  L+      +D     G          
Sbjct: 96  CPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQ------QDLRQESG---------- 139

Query: 365 KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGT 424
            FHVLLT+YE+   D + L S  W+VL VDEAHRLK+  S   + LS +S   +LLLTGT
Sbjct: 140 -FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGT 198

Query: 425 PLQNNLEELFHLLNFLTPEKF--NDLTSFQAEFADISKEEQ-VKRLHDLLGPHMLRRLKA 481
           P+QN+L EL+ LL  + P+ F    +  F   + DI KE +    LH LL P +LRR+KA
Sbjct: 199 PIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKA 258

Query: 482 DVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCN 541
            V   +P K+E +V   +S +QKKYYK IL ++ +A   +   ++V L NI+  L+KC +
Sbjct: 259 QVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENE-TAKKVKLQNILTQLRKCVD 317

Query: 542 HPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRV 601
           HPYLF    E  P + G++    L  A+GKL LL ++L  L   GHR             
Sbjct: 318 HPYLFD-GVEPEPFEVGEH----LIEASGKLHLLDRLLAFLYSGGHRV------------ 360

Query: 602 INSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGE 661
                                                   + F  MT MLDIL+DY+D  
Sbjct: 361 ----------------------------------------LLFSQMTHMLDILQDYMDYR 380

Query: 662 GYKYERIDGNITGSMRQESIDRF-NAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDW 720
           GY YER+DG++ G  R  +I  F N P    FVFLLSTR+GG+G+NL  ADTVI  DSD+
Sbjct: 381 GYSYERVDGSVRGEERHLAIKNFGNQP---IFVFLLSTRAGGVGMNLTAADTVIFVDSDF 437

Query: 721 NPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMI 780
           NP ND+QA +RAHRIG QNK                                     V +
Sbjct: 438 NPQNDLQAAARAHRIG-QNK------------------------------------SVKV 460

Query: 781 YRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELD----DILRFGTEELF 836
            R + R++VEE V + A  K+ LT++V+  G     A     E D    +IL+FG ++L 
Sbjct: 461 IRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFGLDKLL 520

Query: 837 KEEEEQPENTEIIKQEAENQD 857
             E    E+ ++     E +D
Sbjct: 521 SSEGSSMEDIDLKSILGETKD 541


>sp|Q9P793|MIT1_SCHPO Chromatin remodeling factor mit1 OS=Schizosaccharomyces pombe (strain
            972 / ATCC 24843) GN=mit1 PE=1 SV=1
          Length = 1418

 Score =  362 bits (929), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 245/720 (34%), Positives = 360/720 (50%), Gaps = 146/720 (20%)

Query: 156  TIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGS 215
            T   V WR L Y  + WE      P  KE+    N+ K+  +G +   E    E   + S
Sbjct: 481  TFAFVSWRGLTYYMSNWE------PPPKETDR--NRWKAWLKGYSDLLECLWIEKAPTAS 532

Query: 216  KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 275
                     + P T+L  ++  QP F+   G  L  YQL+G+NWL   W  +   ILADE
Sbjct: 533  ------INIDLPFTNL--EWHSQPSFIK--GGTLMPYQLKGLNWLYLRWYTHHPCILADE 582

Query: 276  MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 335
            MGLGKT+Q I+F+  LF    C  P LV  P +T+ NWERE + WAP   +   VG +  
Sbjct: 583  MGLGKTVQVISFISVLFYRHKC-FPVLVIVPHATVANWERELKKWAPFLQINVLVGSEKN 641

Query: 336  RIVLRDHD-ISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVD 394
            R ++RD+  I+ +D  +            V  HVL+ S   +  +++LL   +W VL+VD
Sbjct: 642  RSLVRDYRLINQKDPKH------------VSTHVLVISASNVEREISLLRKFQWKVLIVD 689

Query: 395  EAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAE 454
            E  RLK++QS  F +LS      KLLLTGTPLQNN+ ELF+LL FL P K N     +  
Sbjct: 690  EGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELFNLLQFLNPMKIN-AAELEKR 748

Query: 455  FADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
            ++ I   E+V  LH +L P  LRR+K++VL N P+K E I+ + ++P+QK  YK IL++N
Sbjct: 749  YS-IIDTEKVTELHQILKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKN 807

Query: 515  FEAL---------NPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEI--Q 563
               L         +  GG +  SL NI+M L+K   HPY++    E+   +   YE+  +
Sbjct: 808  LSLLRNITGYANTSSSGGQRTTSLNNILMQLRKTLAHPYIYSPDIED---RNLPYELAMR 864

Query: 564  ALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPY 623
            +L  A+ K ++L  ++ KL   GHR  +  +++                           
Sbjct: 865  SLEEASCKFLILRLLVPKLITRGHRILLFSQFI--------------------------- 897

Query: 624  DKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDR 683
                                     + LDILED+ + +   Y R DG  +   RQ +ID 
Sbjct: 898  -------------------------QQLDILEDWFEYKNIAYARFDGASSEMERQSAIDS 932

Query: 684  FNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYIN 743
            FNAP +    FLLSTR+GG+GINLA+ADTVII D D+NPH D+QA +RAHR G       
Sbjct: 933  FNAPNSELSCFLLSTRAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYG------- 985

Query: 744  LATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMML 803
                                          Q+ KV+++   TR+SVEE++ Q A++K++L
Sbjct: 986  ------------------------------QKKKVLVFVLTTRDSVEEKIIQNAQKKLVL 1015

Query: 804  THLVVRPGMGGKQANFTKQELDDILRFGTEELFKEEEEQPE------NTEIIKQEAENQD 857
             HL+V       Q + ++++L+ ILR G   LF+E  ++P       + E++  EAE Q+
Sbjct: 1016 DHLIVE---SLDQNHNSEKDLESILRHGARALFEEAGDEPSIKYNEYSVELLISEAEKQE 1072


>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
           melanogaster GN=Iswi PE=1 SV=1
          Length = 1027

 Score =  359 bits (921), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 216/629 (34%), Positives = 315/629 (50%), Gaps = 121/629 (19%)

Query: 234 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 293
           +++  P ++    M+   YQ+ G+NW+   +   I+ ILADEMGLGKT+QTI+ L  L  
Sbjct: 115 RFDASPAYIKSGEMR--DYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKH 172

Query: 294 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR-IVLRDHDISWEDTANR 352
             +  GP +V  P ST+ NW  EF+ W P    V  +GD+D R   +RD  +  E     
Sbjct: 173 FKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGE----- 227

Query: 353 GGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG 412
                        + V +TSYE+   + ++     W  LV+DEAHR+K+ +SK  + L  
Sbjct: 228 -------------WDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE 274

Query: 413 YSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEF---ADISKEEQVKRLHD 469
           +   N+LL+TGTPLQNNL EL+ LLNFL P+ FN    F   F     +  +  + RLH 
Sbjct: 275 FKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHA 334

Query: 470 LLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSL 529
           +L P +LRRLKA+V K +  K E  + V LS MQ+ +Y  +L ++ + +N  G  +++ L
Sbjct: 335 VLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRL 394

Query: 530 LNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRY 589
            NI+M L+KC NHPYLF  A    P     +    L   +GK+ +L K+L KL+E G R 
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTH----LVYNSGKMAILDKLLPKLQEQGSRV 450

Query: 590 GIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTK 649
            I                                                    F  MT+
Sbjct: 451 LI----------------------------------------------------FSQMTR 458

Query: 650 MLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLAT 709
           MLDILEDY     Y Y R+DG      R   I  FN   +++F+F+LSTR+GGLGINLAT
Sbjct: 459 MLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLAT 518

Query: 710 ADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRA 769
           AD VIIYDSDWNP  D+QA  RAHRIG                                 
Sbjct: 519 ADVVIIYDSDWNPQMDLQAMDRAHRIG--------------------------------- 545

Query: 770 HRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG--MGGKQANFTKQELDDI 827
               Q+ +V ++R +T ++VEE++ + A+ K+ L  +V++ G  +  +     K E+ +I
Sbjct: 546 ----QKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNI 601

Query: 828 LRFGTEELF--KEEEEQPENTEIIKQEAE 854
           +RFG  ++F  KE +   E+ ++I +  E
Sbjct: 602 IRFGANQVFSSKETDITDEDIDVILERGE 630


>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
           elegans GN=isw-1 PE=1 SV=2
          Length = 1009

 Score =  357 bits (915), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 209/607 (34%), Positives = 316/607 (52%), Gaps = 118/607 (19%)

Query: 235 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 294
           ++K P ++++  M+   YQ+ G+NWL       I+ ILADEMGLGKT+QTI+ +  +   
Sbjct: 120 FDKSPFYIENGEMR--DYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHY 177

Query: 295 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR-IVLRDHDISWEDTANRG 353
            +   P LV  P ST+ NW  EF+ W P    V  +GD+  R  VLRD  +         
Sbjct: 178 KNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQ------- 230

Query: 354 GKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGY 413
                      KF V  T+YE++      L  + W  +++DEAHR+K+ +SK  + +   
Sbjct: 231 -----------KFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVREL 279

Query: 414 SIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADIS---KEEQVKRLHDL 470
           + +N+LL+TGTPLQNNL EL+ LLNFL P+ F     F + F++ +     + V+RLH +
Sbjct: 280 NSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKV 339

Query: 471 LGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLL 530
           L P +LRR+K+DV K++  K E  V V LS MQ+++Y  +L ++ + +N  G  ++  L+
Sbjct: 340 LQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLM 399

Query: 531 NIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYG 590
           NI+M L+KC NHPYLF  A    P    Q+    L   +GK+V+L K+L K KE G R  
Sbjct: 400 NILMHLRKCVNHPYLFDGAEPGPPFTTDQH----LVDNSGKMVVLDKLLMKFKEQGSRVL 455

Query: 591 IKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKM 650
           I                                                    F   ++M
Sbjct: 456 I----------------------------------------------------FSQFSRM 463

Query: 651 LDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATA 710
           LD+LED+     Y+Y R+DG+     R  +I+ +NAP + +F+F+L+TR+GGLGINLATA
Sbjct: 464 LDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATA 523

Query: 711 DTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAH 770
           D VIIYDSDWNP +D+QA  RAHRIG                                  
Sbjct: 524 DVVIIYDSDWNPQSDLQAMDRAHRIG---------------------------------- 549

Query: 771 RIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG-MGGKQANFTKQELDDILR 829
              Q+ +V ++R +T N+V+ER+ + A+ K+ L ++V++ G M   Q    K ++  ++R
Sbjct: 550 ---QKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGDMISMIR 606

Query: 830 FGTEELF 836
            G E++F
Sbjct: 607 HGAEQVF 613


>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
           GN=chd1l PE=2 SV=1
          Length = 1026

 Score =  345 bits (885), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 213/610 (34%), Positives = 302/610 (49%), Gaps = 121/610 (19%)

Query: 246 GMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSA 305
            + L  YQL+G+ WL          IL DEMGLGKT QTI+ L          GPFLV  
Sbjct: 32  AIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLC 91

Query: 306 PLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVK 365
           PL+ + NW +E E + P   V+ Y GDK+ R  L+          N    P        +
Sbjct: 92  PLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQ---------NLKSDP--------R 134

Query: 366 FHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTP 425
           FHVLLT+YE+   D   L S +W +LVVDEAHRLK+ +S   + L  +++  ++LLTGTP
Sbjct: 135 FHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTP 194

Query: 426 LQNNLEELFHLLNFLTPEKF--NDLTSFQAEFADISKEEQ-VKRLHDLLGPHMLRRLKAD 482
           +QNNL+E++ LL F+ P  F    +  F   +ADI  E   V  LH +L P +LRR+KA+
Sbjct: 195 IQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAE 254

Query: 483 VLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNH 542
           V   +P K+E +V   LS +QK+YYK IL R+ +A        +  LLN++M L+KC +H
Sbjct: 255 VAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQS-TKTRLLNVLMQLRKCVDH 313

Query: 543 PYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVI 602
           PYLF     E P + G++    L  A+GKL LL  ML  L+E                  
Sbjct: 314 PYLFDGVEPE-PFEMGEH----LVEASGKLSLLDSMLAYLQE------------------ 350

Query: 603 NSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEG 662
                                             G    + F  MT+MLDIL+DYL+  G
Sbjct: 351 ----------------------------------GGHHVLLFSQMTRMLDILQDYLEYRG 376

Query: 663 YKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNP 722
           Y YER+DG++ G  R  +I  F+      F+FLLST++GG+G+NL  A            
Sbjct: 377 YSYERLDGSVRGEERNLAIKNFSTKDV--FIFLLSTKAGGVGMNLTAA------------ 422

Query: 723 HNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYR 782
                                    DTVI  D D+NP ND+QA +RAHRIGQ   V + R
Sbjct: 423 -------------------------DTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIR 457

Query: 783 FVTRNSVEERVTQVAKRKMMLTHLVVRPG----MGGKQANFTKQELDDILRFGTEELFKE 838
            + R+++EE +   A  K+ LT  V+  G    +   Q+  +  +L +IL+FG ++L   
Sbjct: 458 LLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSS 517

Query: 839 EEEQPENTEI 848
           EE   ++ ++
Sbjct: 518 EESSVQDVDL 527


>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
          Length = 1606

 Score =  344 bits (883), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/587 (35%), Positives = 297/587 (50%), Gaps = 130/587 (22%)

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            L  YQ++G+ WL   +  N++ ILADEMGLGKTIQTI  +  L +     GPFL+  PLS
Sbjct: 746  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 805

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHV 368
            T+ NW  EF+ WAP    V+Y G    R               R   P ++RS   KF+V
Sbjct: 806  TLSNWAYEFDKWAPSVVKVSYKGSPAAR---------------RAFVP-QLRSG--KFNV 847

Query: 369  LLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTGTPLQ 427
            LLT+YE I  D  +L  I W  ++VDE HR+K++  K  + L + Y    +LLLTGTPLQ
Sbjct: 848  LLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQ 907

Query: 428  NNLEELFHLLNFLTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLLGPH 474
            N L EL+ LLNFL P  F   ++F+    A FA      D+++EE    ++RLH +L P 
Sbjct: 908  NKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 967

Query: 475  MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY-----ILTRNFEALNPKGGGQQVSL 529
            +LRRLK +V   +P K E++++ ++S +Q+  Y++     +L  +    + KG G   +L
Sbjct: 968  LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1027

Query: 530  LNIMMDLKKCCNHPYLFP----AAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKED 585
            +N +M L+K CNHPY+F     + +E     GG  +   L RA+GK  LL ++L KL+  
Sbjct: 1028 MNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRAT 1087

Query: 586  GHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
             H+                                                     + F 
Sbjct: 1088 NHKV----------------------------------------------------LLFC 1095

Query: 646  NMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGI 705
             MT ++ I+EDY    G+KY R+DG      R   +  FN PG+  F+FLLSTR+GGLG+
Sbjct: 1096 QMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGL 1155

Query: 706  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQA 765
            NL +ADTVII+DSDWNPH D+QA  RAHRIGQQ                           
Sbjct: 1156 NLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ--------------------------- 1188

Query: 766  FSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM 812
                      N+V + R  T NSVEE++   AK K+ +   V++ GM
Sbjct: 1189 ----------NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM 1225


>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score =  344 bits (883), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/587 (35%), Positives = 297/587 (50%), Gaps = 130/587 (22%)

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            L  YQ++G+ WL   +  N++ ILADEMGLGKTIQTI  +  L +     GPFL+  PLS
Sbjct: 754  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHV 368
            T+ NW  EF+ WAP    V+Y G    R               R   P ++RS   KF+V
Sbjct: 814  TLSNWAYEFDKWAPSVVKVSYKGSPAAR---------------RAFVP-QLRSG--KFNV 855

Query: 369  LLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTGTPLQ 427
            LLT+YE I  D  +L  I W  ++VDE HR+K++  K  + L + Y    +LLLTGTPLQ
Sbjct: 856  LLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQ 915

Query: 428  NNLEELFHLLNFLTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLLGPH 474
            N L EL+ LLNFL P  F   ++F+    A FA      D+++EE    ++RLH +L P 
Sbjct: 916  NKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 975

Query: 475  MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY-----ILTRNFEALNPKGGGQQVSL 529
            +LRRLK +V   +P K E++++ ++S +Q+  Y++     +L  +    + KG G   +L
Sbjct: 976  LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035

Query: 530  LNIMMDLKKCCNHPYLFP----AAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKED 585
            +N +M L+K CNHPY+F     + +E     GG  +   L RA+GK  LL ++L KL+  
Sbjct: 1036 MNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRAT 1095

Query: 586  GHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
             H+                                                     + F 
Sbjct: 1096 NHKV----------------------------------------------------LLFC 1103

Query: 646  NMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGI 705
             MT ++ I+EDY    G+KY R+DG      R   +  FN PG+  F+FLLSTR+GGLG+
Sbjct: 1104 QMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGL 1163

Query: 706  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQA 765
            NL +ADTVII+DSDWNPH D+QA  RAHRIGQQ                           
Sbjct: 1164 NLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ--------------------------- 1196

Query: 766  FSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM 812
                      N+V + R  T NSVEE++   AK K+ +   V++ GM
Sbjct: 1197 ----------NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM 1233


>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
          Length = 1613

 Score =  344 bits (882), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 211/587 (35%), Positives = 297/587 (50%), Gaps = 130/587 (22%)

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            L  YQ++G+ WL   +  N++ ILADEMGLGKTIQTI  +  L +     GPFL+  PLS
Sbjct: 754  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHV 368
            T+ NW  EF+ WAP    V+Y G    R               R   P ++RS   KF+V
Sbjct: 814  TLSNWAYEFDKWAPSVVKVSYKGSPAAR---------------RAFVP-QLRSG--KFNV 855

Query: 369  LLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTGTPLQ 427
            LLT+YE I  D  +L  I W  ++VDE HR+K++  K  + L + Y    +LLLTGTPLQ
Sbjct: 856  LLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQ 915

Query: 428  NNLEELFHLLNFLTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLLGPH 474
            N L EL+ LLNFL P  F   ++F+    A FA      D+++EE    ++RLH +L P 
Sbjct: 916  NKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 975

Query: 475  MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY-----ILTRNFEALNPKGGGQQVSL 529
            +LRRLK +V   +P K E++++ ++S +Q+  Y++     +L  +    + KG G   +L
Sbjct: 976  LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035

Query: 530  LNIMMDLKKCCNHPYLFP----AAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKED 585
            +N +M L+K CNHPY+F     + +E     GG  +   L RA+GK  LL ++L KL+  
Sbjct: 1036 MNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRAT 1095

Query: 586  GHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
             H+                                                     + F 
Sbjct: 1096 NHKV----------------------------------------------------LLFC 1103

Query: 646  NMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGI 705
             MT ++ I+EDY    G+KY R+DG      R   +  FN PG+  F+FLLSTR+GGLG+
Sbjct: 1104 QMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGL 1163

Query: 706  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQA 765
            NL +ADTVII+DSDWNPH D+QA  RAHRIGQQ                           
Sbjct: 1164 NLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ--------------------------- 1196

Query: 766  FSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM 812
                      N+V + R  T NSVEE++   AK K+ +   V++ GM
Sbjct: 1197 ----------NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM 1233


>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
            SV=2
          Length = 1638

 Score =  343 bits (881), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 232/705 (32%), Positives = 345/705 (48%), Gaps = 175/705 (24%)

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            L  YQ++G+ WL   +  N++ ILADEMGLGKTIQTI+ +  L       GP+L+  PLS
Sbjct: 773  LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLS 832

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHV 368
            T+ NW  EFE WAP   VV+Y G    R +L++                ++R++  KF+V
Sbjct: 833  TLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQN----------------QMRAT--KFNV 874

Query: 369  LLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQN-KLLLTGTPLQ 427
            LLT+YE +  D A+L  I+W  +++DE HR+K++  K  + L+ + I   +LLLTGTPLQ
Sbjct: 875  LLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQ 934

Query: 428  NNLEELFHLLNFLTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLLGPH 474
            N L EL+ LLNFL P  F   ++F+    A FA      ++++EE    ++RLH +L P 
Sbjct: 935  NKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 994

Query: 475  MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY-----ILTRNFEALNPKGGGQQVSL 529
            +LRRLK +V   +P K E+I++ ++S +Q+  YK+     +L  +       G G   +L
Sbjct: 995  LLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKAL 1054

Query: 530  LNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQA---LTRAAGKLVLLSKMLKKLKEDG 586
            +N ++ L+K CNHP++F    E+     G + + +   L R +GK  LL ++L KLK   
Sbjct: 1055 MNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATN 1114

Query: 587  HRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYN 646
            HR                                                     + F  
Sbjct: 1115 HRV----------------------------------------------------LLFCQ 1122

Query: 647  MTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGIN 706
            MT+ + I+EDYL    + Y R+DG      R E + +FNA G+  FVFLLSTR+GGLG+N
Sbjct: 1123 MTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLN 1182

Query: 707  LATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAF 766
            L TADTV+I+DSDWNPH D+QA  RAHRIGQ                             
Sbjct: 1183 LQTADTVVIFDSDWNPHQDLQAQDRAHRIGQ----------------------------- 1213

Query: 767  SRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM------GGKQANF- 819
                    +N+V + R +T NSVEER+   A+ K+ +   V++ GM      G ++  F 
Sbjct: 1214 --------RNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1265

Query: 820  -----------------------------TKQELDDILRFGTEELFKEEEEQPENTEIIK 850
                                         +++E++   R   E   ++EE  P    +I 
Sbjct: 1266 QTILHQDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLID 1325

Query: 851  QEAENQDPAYWVK----LLRHHYEQHQEDVSRTLGKGKRVRKQTD 891
               E++ P +  K    + R HY Q+ ED    LG+G R RK+ D
Sbjct: 1326 ---ESELPDWLTKDDDEVERFHY-QYDEDT--ILGRGSRQRKEVD 1364


>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
            SV=1
          Length = 1613

 Score =  343 bits (881), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 211/587 (35%), Positives = 297/587 (50%), Gaps = 130/587 (22%)

Query: 249  LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 308
            L  YQ++G+ WL   +  N++ ILADEMGLGKTIQTI  +  L +     GPFL+  PLS
Sbjct: 754  LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813

Query: 309  TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHV 368
            T+ NW  EF+ WAP    V+Y G    R               R   P ++RS   KF+V
Sbjct: 814  TLSNWAYEFDKWAPSVVKVSYKGSPAAR---------------RAFVP-QLRSG--KFNV 855

Query: 369  LLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL-SGYSIQNKLLLTGTPLQ 427
            LLT+YE I  D  +L  I W  ++VDE HR+K++  K  + L + Y    +LLLTGTPLQ
Sbjct: 856  LLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQ 915

Query: 428  NNLEELFHLLNFLTPEKFNDLTSFQ----AEFA------DISKEEQ---VKRLHDLLGPH 474
            N L EL+ LLNFL P  F   ++F+    A FA      D+++EE    ++RLH +L P 
Sbjct: 916  NKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 975

Query: 475  MLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY-----ILTRNFEALNPKGGGQQVSL 529
            +LRRLK +V   +P K E++++ ++S +Q+  Y++     +L  +    + KG G   +L
Sbjct: 976  LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL 1035

Query: 530  LNIMMDLKKCCNHPYLFP----AAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKED 585
            +N +M L+K CNHPY+F     + +E     GG  +   L RA+GK  LL ++L KL+  
Sbjct: 1036 MNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRAT 1095

Query: 586  GHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY 645
             H+                                                     + F 
Sbjct: 1096 NHKV----------------------------------------------------LLFC 1103

Query: 646  NMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGI 705
             MT ++ I+EDY    G+KY R+DG      R   +  FN PG+  F+FLLSTR+GGLG+
Sbjct: 1104 QMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGL 1163

Query: 706  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQA 765
            NL +ADTVII+DSDWNPH D+QA  RAHRIGQQ                           
Sbjct: 1164 NLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ--------------------------- 1196

Query: 766  FSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM 812
                      N+V + R  T NSVEE++   AK K+ +   V++ GM
Sbjct: 1197 ----------NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM 1233


>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=STH1 PE=1 SV=1
          Length = 1359

 Score =  342 bits (878), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 210/542 (38%), Positives = 293/542 (54%), Gaps = 96/542 (17%)

Query: 231 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
           +++K +KQP  L   G  L  YQL G+ W+   +  +++ ILADEMGLGKTIQ+I+ +  
Sbjct: 454 IKEKIDKQPSIL--VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITY 511

Query: 291 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
           L++     GPFLV  PLSTI NW  EFE WAP    + Y G  + R  L+ H I      
Sbjct: 512 LYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQ-HQI------ 564

Query: 351 NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKF-FKF 409
            R G           F VLLT+YE I  D +LL   +WA +++DE HR+K+ QSK  F  
Sbjct: 565 -RVG----------NFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTI 613

Query: 410 LSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQ----AEFADISKEEQ-- 463
              Y  +N+L+LTGTPLQNNL EL+ LLNF+ P+ FN   +F+      FA+   +E+  
Sbjct: 614 SHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLE 673

Query: 464 ---------VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
                    ++RLH +L P +LRRLK +V K++P K E +++ +LS +Q++ Y+ +L  N
Sbjct: 674 LTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHN 733

Query: 515 --FEALNPKGG--GQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAG 570
             F     +G   G    L N +M L+K CNHP++F     E  V   +     L R AG
Sbjct: 734 ALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEV--EGVVNPSRGNSDLLFRVAG 791

Query: 571 KLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 630
           K  LL ++L K K  GHR                                          
Sbjct: 792 KFELLDRVLPKFKASGHRV----------------------------------------- 810

Query: 631 ENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
                      + F+ MT+++DI+ED+L  +  KY R+DG+     R E ++ FNAP + 
Sbjct: 811 -----------LMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSD 859

Query: 691 QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQN--KYINLATAD 748
            F FLLSTR+GGLG+NL TADTVII+D+DWNPH D+QA  RAHRIGQ+N  + + L T D
Sbjct: 860 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 919

Query: 749 TV 750
           +V
Sbjct: 920 SV 921


>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
            OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
            GN=snf22 PE=1 SV=2
          Length = 1680

 Score =  339 bits (870), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 207/584 (35%), Positives = 294/584 (50%), Gaps = 126/584 (21%)

Query: 245  TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 304
             G  L  YQL+G+ W+   +  N++ ILADEMGLGKTIQTI F+  L ++ + +GPFL+ 
Sbjct: 865  VGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLII 924

Query: 305  APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTV 364
             PLST+ NW  EFE WAP    + Y G    R  L+                 +IRSS  
Sbjct: 925  VPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQ----------------SQIRSSN- 967

Query: 365  KFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSG-YSIQNKLLLTG 423
             F+VLLT++E I  D  LL  I+W  +++DE HR+K+ QSK    LS  Y  Q +L+LTG
Sbjct: 968  -FNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTG 1026

Query: 424  TPLQNNLEELFHLLNFLTPEKFNDLTS----FQAEFADISKEEQ-----------VKRLH 468
            TPLQNNL EL+ LLNF+ P+ FN + S    F   FA+   +++           +KRLH
Sbjct: 1027 TPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLH 1086

Query: 469  DLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQV- 527
             +L P + RRLK DV K +P K E +++  LS +Q K Y+ +       ++ + G   + 
Sbjct: 1087 KVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIK 1146

Query: 528  SLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGH 587
             L N +M LKK CNHP++F     E  +      +  L RAAGK  LL ++L KL   GH
Sbjct: 1147 GLQNTVMQLKKICNHPFIFEDV--ERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGH 1204

Query: 588  RYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNM 647
            +                                                    ++ F+ M
Sbjct: 1205 K----------------------------------------------------TLMFFQM 1212

Query: 648  TKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINL 707
            T+++ I+EDYL  + +KY R+DG+     R   + +FN P +  ++F+LSTR+GGLG+NL
Sbjct: 1213 TQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNL 1272

Query: 708  ATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFS 767
             TADTVII+D+DWNPH D+QA  RAHR                                 
Sbjct: 1273 QTADTVIIFDTDWNPHQDLQAQDRAHR--------------------------------- 1299

Query: 768  RAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPG 811
                IGQ  +V I R +T  S+EE +   A+ K+ L   V++ G
Sbjct: 1300 ----IGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAG 1339


>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
            (strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
          Length = 1703

 Score =  339 bits (870), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 217/632 (34%), Positives = 321/632 (50%), Gaps = 138/632 (21%)

Query: 231  LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
            +++  +KQP  L   G  L  YQ++G+ W+   +  +++ ILADEMGLGKTIQTI+ L  
Sbjct: 751  IKEDIKKQPSIL--VGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 808

Query: 291  LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
            L++  + +GP+LV  PLST+ NW  EF  WAP    +++ G  +                
Sbjct: 809  LYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPN---------------- 852

Query: 351  NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
             R  K  +IR+   +F V+LT++E I  + ALL  ++W  +++DE HR+K+ QSK    L
Sbjct: 853  ERKAKQAKIRAG--EFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTL 910

Query: 411  -SGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEF------------AD 457
             + Y    +L+LTGTPLQNNL EL+ LLNF+ P+ FN + SF   F             +
Sbjct: 911  NTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 970

Query: 458  ISKEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRN 514
            +S+EE    ++RLH +L P +LRRLK DV K +P K E +V+ ++S +Q+  Y+ +L   
Sbjct: 971  LSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYR 1030

Query: 515  FEALNPKGGGQQVSLL---NIMMDLKKCCNHPYLFPAAAEEA-PVQGGQYEIQALTRAAG 570
               +  +   + V L    N +M LKK CNHP++F    ++  P +    +I    R AG
Sbjct: 1031 RLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIW---RVAG 1087

Query: 571  KLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWED 630
            K  LL ++L KLK  GHR  I                                       
Sbjct: 1088 KFELLDRILPKLKATGHRVLI--------------------------------------- 1108

Query: 631  ENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGAS 690
                         F+ MT+++DI+ED+L     KY R+DG+     R E +  FNAP + 
Sbjct: 1109 -------------FFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSE 1155

Query: 691  QFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTV 750
               F+LSTR+GGLG+NL TADTVII+D+DWNPH D+QA  RAHRIG              
Sbjct: 1156 YLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG-------------- 1201

Query: 751  IIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRP 810
                                   Q+N+V I R +T NSVEE + + A +K+ +   V++ 
Sbjct: 1202 -----------------------QKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQA 1238

Query: 811  GMGGKQANFTKQELDDILRFGTEELFKEEEEQ 842
            G    ++  T +E + +LR     L   EEE+
Sbjct: 1239 GKFDNKS--TSEEQEALLR----SLLDAEEER 1264


>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
            GN=Smarca2 PE=1 SV=1
          Length = 1577

 Score =  339 bits (869), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 211/605 (34%), Positives = 300/605 (49%), Gaps = 132/605 (21%)

Query: 231  LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 290
            + ++ EKQ   L +    L  YQL+G+ W+   +  N++ ILADEMGLGKTIQTI  +  
Sbjct: 713  ISERVEKQSALLING--TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 770

Query: 291  LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTA 350
            L +     GP+L+  PLST+ NW  EF+ WAP    ++Y G    R  L           
Sbjct: 771  LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP--------- 821

Query: 351  NRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFL 410
                   ++RS   KF+VLLT+YE I  D  +L  I W  ++VDE HR+K++  K  + L
Sbjct: 822  -------QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVL 872

Query: 411  -SGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQ----AEFA------DIS 459
             + Y    ++LLTGTPLQN L EL+ LLNFL P  F   ++F+    A FA      D++
Sbjct: 873  NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLN 932

Query: 460  KEEQ---VKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKY-----IL 511
            +EE    ++RLH +L P +LRRLK +V   +P K E++++ ++S +QK  Y++     IL
Sbjct: 933  EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGIL 992

Query: 512  TRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFP----AAAEEAPVQGGQYEIQALTR 567
              +    + KG G   +L+N +M L+K CNHPY+F     + AE      G      L R
Sbjct: 993  LTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYR 1052

Query: 568  AAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKAT 627
            A+GK  LL ++L KL+   HR                                       
Sbjct: 1053 ASGKFELLDRILPKLRATNHRV-------------------------------------- 1074

Query: 628  WEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAP 687
                          + F  MT ++ I+EDY     + Y R+DG      R   + +FN P
Sbjct: 1075 --------------LLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEP 1120

Query: 688  GASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATA 747
            G+  F+FLLSTR+GGLG+NL  ADTV+I+DSDWNPH D+QA  RAHRIGQQ         
Sbjct: 1121 GSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQ--------- 1171

Query: 748  DTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLV 807
                                        N+V + R  T NSVEE++   AK K+ +   V
Sbjct: 1172 ----------------------------NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 1203

Query: 808  VRPGM 812
            ++ GM
Sbjct: 1204 IQAGM 1208


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.134    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 394,340,201
Number of Sequences: 539616
Number of extensions: 18149581
Number of successful extensions: 76347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 518
Number of HSP's that attempted gapping in prelim test: 72163
Number of HSP's gapped (non-prelim): 3289
length of query: 1001
length of database: 191,569,459
effective HSP length: 127
effective length of query: 874
effective length of database: 123,038,227
effective search space: 107535410398
effective search space used: 107535410398
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)